Your job contains 1 sequence.
>psy5025
MVKSDNQVILDDWNTVRVFRHRWDAWIQLNDGNKIKGRSKECLEDKCNKTPCEHGGKCIT
TPGSSYCLCPLGFTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQYLSLLDLTIVFKAIEPN
GILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSNPISLGEWHKLRLTRTGR
HAYLQVDRFPSSQILSPGPFTQLSLSLSLYLGGVPDYNIVSPKVKIKSSFIGCIQKVLIN
NHELNILGEAIQGVNVVNCAHPCITQPCGSGSCVPLYDGYKCVCTQSCKESHLTEVMCAS
FDHGASFLHYLDPEIIHSSGLLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSS
QSKDFLALGIHNGYAHVMYNLGNGEVLLENNQTKINNGVWHRLTVHRNFMVVMHGSSHTR
SNKSSKIEFKCLSIQRLHRTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVEDIE
ELTRSKYHHSFKGWISNLILSNDYQVKLPLSRSQGSSCQLTCETLNTGQVTCF
The BLAST search returned 8 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy5025
(533 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0034070 - symbol:SP2353 "SP2353" species:7227 "Dro... 619 2.2e-94 4
UNIPROTKB|E1BQW4 - symbol:EGFLAM "Uncharacterized protein... 566 2.5e-70 3
UNIPROTKB|Q63HQ2 - symbol:EGFLAM "Pikachurin" species:960... 566 5.5e-69 3
UNIPROTKB|A3KN33 - symbol:EGFLAM "Pikachurin" species:991... 552 2.0e-67 3
MGI|MGI:2146149 - symbol:Egflam "EGF-like, fibronectin ty... 539 1.1e-65 3
UNIPROTKB|F1N606 - symbol:EGFLAM "Pikachurin" species:991... 541 4.6e-57 2
RGD|1306592 - symbol:Egflam "EGF-like, fibronectin type I... 536 1.8e-55 2
UNIPROTKB|F1LQ53 - symbol:Agrn "Agrin" species:10116 "Rat... 494 2.5e-54 3
RGD|2067 - symbol:Agrn "agrin" species:10116 "Rattus norv... 416 1.7e-51 3
UNIPROTKB|I3LEG7 - symbol:EGFLAM "Uncharacterized protein... 405 3.2e-51 3
MGI|MGI:87961 - symbol:Agrn "agrin" species:10090 "Mus mu... 414 1.5e-50 3
UNIPROTKB|I3LGD9 - symbol:I3LGD9 "Uncharacterized protein... 459 2.0e-50 3
UNIPROTKB|F1Q2Z6 - symbol:AGRN "Uncharacterized protein" ... 461 3.6e-49 3
UNIPROTKB|F1MSI2 - symbol:AGRN "Uncharacterized protein" ... 451 1.9e-48 3
UNIPROTKB|F1NWQ6 - symbol:AGRN "Agrin" species:9031 "Gall... 466 4.1e-48 2
UNIPROTKB|F1P3E3 - symbol:AGRN "Agrin" species:9031 "Gall... 445 6.5e-46 2
ZFIN|ZDB-GENE-030131-1033 - symbol:agrn "agrin" species:7... 402 4.1e-44 3
UNIPROTKB|P31696 - symbol:AGRN "Agrin" species:9031 "Gall... 400 3.6e-39 3
MGI|MGI:96257 - symbol:Hspg2 "perlecan (heparan sulfate p... 331 1.6e-38 3
UNIPROTKB|P98160 - symbol:HSPG2 "Basement membrane-specif... 318 1.3e-36 3
UNIPROTKB|O00468 - symbol:AGRN "Agrin" species:9606 "Homo... 390 3.0e-36 2
UNIPROTKB|F1MER7 - symbol:HSPG2 "Uncharacterized protein"... 318 2.2e-35 3
ZFIN|ZDB-GENE-080807-4 - symbol:hspg2 "heparan sulfate pr... 321 4.1e-31 2
FB|FBgn0261451 - symbol:trol "terribly reduced optic lobe... 268 7.3e-25 5
UNIPROTKB|F1NAT6 - symbol:HSPG2 "Uncharacterized protein"... 285 2.4e-24 2
UNIPROTKB|Q5T1H1 - symbol:EYS "Protein eyes shut homolog"... 259 8.6e-22 3
FB|FBgn0031414 - symbol:eys "eyes shut" species:7227 "Dro... 229 1.2e-18 3
UNIPROTKB|F1NAE5 - symbol:CNTNAP1 "Uncharacterized protei... 225 1.4e-18 2
ZFIN|ZDB-GENE-091113-51 - symbol:si:ch211-122m3.1 "si:ch2... 213 2.0e-17 2
FB|FBgn0038975 - symbol:Nrx-1 "Neurexin 1" species:7227 "... 252 2.5e-17 2
ZFIN|ZDB-GENE-081105-126 - symbol:cntnap5a "contactin ass... 224 3.4e-17 2
UNIPROTKB|D0PRN3 - symbol:D0PRN3 "Neurexin-3" species:903... 205 6.7e-17 2
ZFIN|ZDB-GENE-070705-209 - symbol:cntnap5b "contactin ass... 242 9.0e-17 1
MGI|MGI:3643623 - symbol:Cntnap5a "contactin associated p... 207 9.0e-17 2
RGD|1559812 - symbol:Cntnap5a "contactin associated prote... 205 9.3e-17 2
UNIPROTKB|F1LRD8 - symbol:Cntnap5a "Contactin-associated ... 204 1.2e-16 2
UNIPROTKB|F1S5G9 - symbol:LOC100738148 "Uncharacterized p... 210 2.7e-16 2
RGD|1566343 - symbol:Cntnap5c "contactin associated prote... 203 5.1e-16 2
RGD|620212 - symbol:Nrxn3 "neurexin 3" species:10116 "Rat... 207 6.0e-16 2
UNIPROTKB|Q07310 - symbol:Nrxn3 "Neurexin-3" species:1011... 207 6.0e-16 2
UNIPROTKB|Q0V8S9 - symbol:CNTNAP5 "Contactin-associated p... 206 1.0e-15 2
UNIPROTKB|F1NW79 - symbol:CNTNAP5 "Contactin-associated p... 206 1.0e-15 2
UNIPROTKB|Q0V8T0 - symbol:CNTNAP5 "Contactin-associated p... 199 1.1e-15 2
UNIPROTKB|F5H0L2 - symbol:CRB1 "Protein crumbs homolog 1"... 173 1.4e-15 3
MGI|MGI:3045256 - symbol:Fat4 "FAT tumor suppressor homol... 241 1.8e-15 2
RGD|1564291 - symbol:Fat4 "FAT tumor suppressor homolog 4... 239 1.9e-15 2
UNIPROTKB|F1LS94 - symbol:Nrxn2 "Neurexin-2-beta" species... 192 2.0e-15 3
UNIPROTKB|Q63374 - symbol:Nrxn2 "Neurexin-2" species:1011... 192 2.0e-15 3
WB|WBGene00006787 - symbol:unc-52 species:6239 "Caenorhab... 234 2.3e-15 2
UNIPROTKB|Q06561 - symbol:unc-52 "Basement membrane prote... 234 2.3e-15 2
RGD|1309947 - symbol:Crb1 "crumbs homolog 1 (Drosophila)"... 186 2.5e-15 2
UNIPROTKB|F6XUN7 - symbol:CRB1 "Uncharacterized protein" ... 196 2.6e-15 3
UNIPROTKB|F1Q0H7 - symbol:CRB1 "Uncharacterized protein" ... 196 3.3e-15 3
UNIPROTKB|J9NSB0 - symbol:NRXN2 "Uncharacterized protein"... 192 4.5e-15 3
RGD|1565194 - symbol:Cntnap5b "contactin associated prote... 185 5.6e-15 2
UNIPROTKB|E2RC00 - symbol:NRXN2 "Uncharacterized protein"... 192 6.6e-15 3
UNIPROTKB|E1BT21 - symbol:CRB1 "Uncharacterized protein" ... 166 8.0e-15 2
UNIPROTKB|F1RQP6 - symbol:NRXN2 "Uncharacterized protein"... 191 1.1e-14 3
UNIPROTKB|E1BFN9 - symbol:NRXN2 "Uncharacterized protein"... 191 1.5e-14 3
UNIPROTKB|Q9UHC6 - symbol:CNTNAP2 "Contactin-associated p... 186 2.4e-14 2
ZFIN|ZDB-GENE-070206-5 - symbol:nrxn2a "neurexin 2a" spec... 209 2.4e-14 2
UNIPROTKB|F1NLP0 - symbol:FAT4 "Uncharacterized protein" ... 230 3.0e-14 2
UNIPROTKB|Q8WYK1 - symbol:CNTNAP5 "Contactin-associated p... 190 3.6e-14 2
MGI|MGI:1914047 - symbol:Cntnap2 "contactin associated pr... 184 4.0e-14 2
UNIPROTKB|B1AMA2 - symbol:CNTNAP3 "Contactin-associated p... 184 4.4e-14 2
UNIPROTKB|E2RR85 - symbol:FAT4 "Uncharacterized protein" ... 225 5.2e-14 2
ZFIN|ZDB-GENE-050425-1 - symbol:fat1 "FAT tumor suppresso... 222 6.0e-14 1
UNIPROTKB|F1NNM6 - symbol:NRXN1 "Neurexin-1" species:9031... 152 6.4e-14 3
UNIPROTKB|E1B949 - symbol:FAT4 "Uncharacterized protein" ... 224 6.7e-14 2
UNIPROTKB|Q9BZ76 - symbol:CNTNAP3 "Contactin-associated p... 184 7.6e-14 2
UNIPROTKB|F1NDL6 - symbol:F1NDL6 "Uncharacterized protein... 181 9.9e-14 2
UNIPROTKB|P82279 - symbol:CRB1 "Protein crumbs homolog 1"... 173 1.1e-13 4
ZFIN|ZDB-GENE-030722-4 - symbol:slit1b "slit homolog 1b (... 214 1.3e-13 1
UNIPROTKB|H3BLY1 - symbol:CNTNAP3B "Contactin-associated ... 180 1.7e-13 2
UNIPROTKB|Q96NU0 - symbol:CNTNAP3B "Contactin-associated ... 180 2.1e-13 2
UNIPROTKB|Q6V0I7 - symbol:FAT4 "Protocadherin Fat 4" spec... 221 2.3e-13 2
FB|FBgn0015609 - symbol:CadN "Cadherin-N" species:7227 "D... 204 2.7e-13 2
UNIPROTKB|F5GYC7 - symbol:NRXN1 "Neurexin-1-beta" species... 204 2.7e-13 4
UNIPROTKB|F1MMZ4 - symbol:NRXN1 "Neurexin-1-beta" species... 188 3.1e-13 3
UNIPROTKB|F1M3K8 - symbol:F1M3K8 "Uncharacterized protein... 188 3.1e-13 3
UNIPROTKB|D4AA49 - symbol:D4AA49 "Uncharacterized protein... 191 3.7e-13 2
UNIPROTKB|J9NZ68 - symbol:SLIT2 "Uncharacterized protein"... 201 4.5e-13 2
UNIPROTKB|F1P8A1 - symbol:SLIT2 "Uncharacterized protein"... 201 6.2e-13 2
WB|WBGene00000396 - symbol:cdh-4 species:6239 "Caenorhabd... 191 6.3e-13 2
UNIPROTKB|F1LZ16 - symbol:F1LZ16 "Uncharacterized protein... 188 6.9e-13 3
UNIPROTKB|Q9Y4C0 - symbol:NRXN3 "Neurexin-3" species:9606... 220 7.2e-13 2
UNIPROTKB|F1N119 - symbol:NRXN1 "Neurexin-1-beta" species... 188 8.8e-13 3
ZFIN|ZDB-GENE-060118-1 - symbol:lama1 "laminin, alpha 1" ... 183 9.0e-13 4
ZFIN|ZDB-GENE-030722-3 - symbol:slit1a "slit homolog 1a (... 206 9.5e-13 1
RGD|1306459 - symbol:Cntnap4 "contactin associated protei... 178 9.8e-13 3
UNIPROTKB|F1LX29 - symbol:Cntnap4 "Protein Cntnap4" speci... 177 1.1e-12 3
UNIPROTKB|F1M3J7 - symbol:Cntnap4 "Protein Cntnap4" speci... 177 1.1e-12 3
UNIPROTKB|G5E9G7 - symbol:NRXN2 "Neurexin-2" species:9606... 192 1.1e-12 2
UNIPROTKB|Q9P2S2 - symbol:NRXN2 "Neurexin-2" species:9606... 192 1.2e-12 2
UNIPROTKB|F1PSE5 - symbol:F1PSE5 "Uncharacterized protein... 177 1.2e-12 2
UNIPROTKB|F1MYL5 - symbol:F1MYL5 "Uncharacterized protein... 172 1.3e-12 2
MGI|MGI:3646013 - symbol:Cntnap5c "contactin associated p... 165 1.4e-12 2
FB|FBgn0013997 - symbol:Nrx-IV "Neurexin IV" species:7227... 169 2.6e-12 2
UNIPROTKB|E1BP10 - symbol:SLIT1 "Uncharacterized protein"... 197 2.8e-12 2
UNIPROTKB|F8WB18 - symbol:NRXN1 "Neurexin-1-beta" species... 204 2.9e-12 2
WARNING: Descriptions of 341 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0034070 [details] [associations]
symbol:SP2353 "SP2353" species:7227 "Drosophila melanogaster"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005615
"extracellular space" evidence=ISS] [GO:0046716 "muscle cell
homeostasis" evidence=IGI;IMP] [GO:0042052 "rhabdomere development"
evidence=IMP] InterPro:IPR000742 Pfam:PF00008 PROSITE:PS50026
SMART:SM00181 EMBL:AE013599 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0046716 PROSITE:PS01186 InterPro:IPR001791
SMART:SM00282 PROSITE:PS50025 GeneTree:ENSGT00530000063501
Pfam:PF02210 GO:GO:0042052 eggNOG:NOG238064 RefSeq:NP_611082.2
ProteinModelPortal:A1ZA87 SMR:A1ZA87 PRIDE:A1ZA87
EnsemblMetazoa:FBtr0087209 GeneID:36771 KEGG:dme:Dmel_CG8403
UCSC:CG8403-RA CTD:36771 FlyBase:FBgn0034070 InParanoid:A1ZA87
OMA:EFRPESF OrthoDB:EOG4JSXMJ PhylomeDB:A1ZA87 GenomeRNAi:36771
NextBio:800300 Bgee:A1ZA87 Uniprot:A1ZA87
Length = 1361
Score = 619 (223.0 bits), Expect = 2.2e-94, Sum P(4) = 2.2e-94
Identities = 116/258 (44%), Positives = 164/258 (63%)
Query: 32 GNKIKGRS-KECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQFN 90
G+ I G ++C DKC + PC+HGGKC+ + + CLCP+GF GDLC+ R+DLQVP FN
Sbjct: 567 GDVINGFDIQDCSTDKCVRYPCQHGGKCLPSDQGAICLCPIGFVGDLCEIRMDLQVPAFN 626
Query: 91 GSSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNG--HRADGVGDFIALYLNDRYVDF 148
GSS+LRY LG+ L L+L + K + +G++LY+G HR GDFIALYLND +V+F
Sbjct: 627 GSSFLRYAPLGDSALIWLELKVTLKPEQADGLILYSGPEHR----GDFIALYLNDGFVEF 682
Query: 149 TFDLGTGAATLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXX 208
FDLG+G A +RS + +SLG+WH ++++RT R A L+VD+ +S F
Sbjct: 683 AFDLGSGPALVRSEHSLSLGQWHTIKISRTARLAVLKVDKHQEVLTISSNGFWHLSLDQN 742
Query: 209 XXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNCAHPCITQPC 268
GGV + + +K K F+GCIQ++ IN H L I+ EA+ G N+ NC H C+ +PC
Sbjct: 743 LFVGGVNHVDRLPLDLKYKPFFVGCIQRIDINGHSLGIVAEALGGSNIGNCPHACVARPC 802
Query: 269 GS-GSCVPLYDGYKCVCT 285
G CVP + Y+C C+
Sbjct: 803 GPLAECVPQMESYECRCS 820
Score = 389 (142.0 bits), Expect = 8.3e-44, Sum P(2) = 8.3e-44
Identities = 120/435 (27%), Positives = 200/435 (45%)
Query: 47 CNKTPCEHGGKCI--TTPGSSYCLCPLGFTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQY 104
CN C G C T SS CLCP G TG+ CQ + VP+F S+L + L Y
Sbjct: 362 CN-LDCGSDGICALEATAASSRCLCPFGKTGNGCQEDIRAHVPRFAKRSWLAFPALHGAY 420
Query: 105 LSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSNP 164
+ L I F+ +GI+L +G R D GDF+AL LN +V+F FD G+G ++RS
Sbjct: 421 KHV-QLRIEFRPESFDGIILLSGERDDLTGDFMALLLNKGFVEFWFDCGSGVGSVRSRET 479
Query: 165 ISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSPKV 224
I L EW+ + + R A+L ++ Q S G F++ GG+ + ++ ++
Sbjct: 480 ILLNEWNSVIIYRHRWDAWLVLNHGTKVQGRSNGLFSRITFREPVFLGGIGNITGLAKRL 539
Query: 225 KIKSSFIGCIQKVLINNHELNI----LGEAIQGVNVVNCA-HPCITQPCG-SGSCVPLYD 278
+ F GCI++ + N H+ LG+ I G ++ +C+ C+ PC G C+P
Sbjct: 540 PLAEGFAGCIRRFVANEHDYKFTEHPLGDVINGFDIQDCSTDKCVRYPCQHGGKCLPSDQ 599
Query: 279 GYKCVCT-----QSCKESHLTEVMCASFDHGASFLHYLDPEIIHSSGLLHYKFQLHVDFR 333
G C+C C E + ++ +F+ G+SFL Y P + S L+ ++ +
Sbjct: 600 GAICLCPIGFVGDLC-EIRM-DLQVPAFN-GSSFLRYA-P--LGDSALIW------LELK 647
Query: 334 ITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQT 393
+T +K + GLIL++G DF+AL +++G+ + +
Sbjct: 648 VT---------LKPEQADGLILYSGPEHRGDFIALYLNDGFVEFAFDLGSGPALVRSEHS 698
Query: 394 KINNGVWHRLTVHRNF-MVVMHGSSHTRSNKSSKIEFKCLSI-QRLHRTGKQCLIRIDTD 451
++ G WH + + R + V+ H S F LS+ Q L G + R+ D
Sbjct: 699 -LSLGQWHTIKISRTARLAVLKVDKHQEVLTISSNGFWHLSLDQNLFVGGVNHVDRLPLD 757
Query: 452 YSMQSISGGKFEQLN 466
+ G ++++
Sbjct: 758 LKYKPFFVGCIQRID 772
Score = 191 (72.3 bits), Expect = 5.8e-20, Sum P(2) = 5.8e-20
Identities = 49/165 (29%), Positives = 81/165 (49%)
Query: 89 FNGS-SYLRYQGLG--EQYLSL-LDLTIVFKAIEPNGILLYNGHRA--DGVGDFIALYLN 142
F GS SY Y Q +S +DL + K NG++L+ G + + D+++L +
Sbjct: 1181 FAGSDSYFHYNDADTMSQVISYSIDLNLRIKTHSENGVILWTGRQGTTEEHDDYLSLGIE 1240
Query: 143 DRYVDFTFDLGTGAATLR-SSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFT 201
Y+ F +DLG+G +R + +S G WH++R R + YL+VD + + +PG
Sbjct: 1241 QGYLHFRYDLGSGEVDIRFNGTKVSDGLWHRVRAIRNSQEGYLEVDGRKTVTLRAPGKLR 1300
Query: 202 QXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQK-VLINNHELN 245
Q GG+PD + + + S +GCI + VL +LN
Sbjct: 1301 QLNTDTGLYVGGMPDVGYFTHQ-RYFSGIVGCISEIVLAGEMKLN 1344
Score = 158 (60.7 bits), Expect = 2.2e-94, Sum P(4) = 2.2e-94
Identities = 32/95 (33%), Positives = 49/95 (51%)
Query: 318 SSGLLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTG----SSQSKDFLALGIHNG 373
S HY ++ Y ++++RIKT S +G+ILWTG + + D+L+LGI G
Sbjct: 1184 SDSYFHYN-DADTMSQVISYSIDLNLRIKTHSENGVILWTGRQGTTEEHDDYLSLGIEQG 1242
Query: 374 YAHVMYXXXXXXXXXXXXQTKINNGVWHRLTVHRN 408
Y H Y TK+++G+WHR+ RN
Sbjct: 1243 YLHFRYDLGSGEVDIRFNGTKVSDGLWHRVRAIRN 1277
Score = 134 (52.2 bits), Expect = 2.2e-94, Sum P(4) = 2.2e-94
Identities = 23/55 (41%), Positives = 35/55 (63%)
Query: 2 VKSDNQVILDDWNTVRVFRHRWDAWIQLNDGNKIKGRSKECLEDKCNKTPCEHGG 56
V+S ++L++WN+V ++RHRWDAW+ LN G K++GRS + P GG
Sbjct: 474 VRSRETILLNEWNSVIIYRHRWDAWLVLNHGTKVQGRSNGLFSRITFREPVFLGG 528
Score = 116 (45.9 bits), Expect = 2.2e-94, Sum P(4) = 2.2e-94
Identities = 23/71 (32%), Positives = 40/71 (56%)
Query: 436 RLHRTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVEDIEELTRSKYHHSFKGWI 495
R R ++ + +D ++ + GK QLNTD+GLYVGG+ D+ T +Y G I
Sbjct: 1273 RAIRNSQEGYLEVDGRKTVTLRAPGKLRQLNTDTGLYVGGMPDVGYFTHQRYFSGIVGCI 1332
Query: 496 SNLILSNDYQV 506
S ++L+ + ++
Sbjct: 1333 SEIVLAGEMKL 1343
Score = 89 (36.4 bits), Expect = 4.3e-09, Sum P(2) = 4.3e-09
Identities = 24/91 (26%), Positives = 43/91 (47%)
Query: 436 RLHRTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVEDIEELTRS-KYHHSFKGW 494
++ RT + ++++D + +IS F L+ D L+VGGV ++ L KY F G
Sbjct: 708 KISRTARLAVLKVDKHQEVLTISSNGFWHLSLDQNLFVGGVNHVDRLPLDLKYKPFFVGC 767
Query: 495 ISNLILSNDYQVKLPLSRSQGSS---CQLTC 522
I + + N + + + GS+ C C
Sbjct: 768 IQRIDI-NGHSLGIVAEALGGSNIGNCPHAC 797
Score = 45 (20.9 bits), Expect = 1.8e-14, Sum P(3) = 1.8e-14
Identities = 6/20 (30%), Positives = 15/20 (75%)
Query: 1 MVKSDNQVILDDWNTVRVFR 20
+V+S++ + L W+T+++ R
Sbjct: 692 LVRSEHSLSLGQWHTIKISR 711
>UNIPROTKB|E1BQW4 [details] [associations]
symbol:EGFLAM "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005539 "glycosaminoglycan binding"
evidence=IEA] [GO:0005604 "basement membrane" evidence=IEA]
[GO:0005614 "interstitial matrix" evidence=IEA] [GO:0010811
"positive regulation of cell-substrate adhesion" evidence=IEA]
[GO:0019800 "peptide cross-linking via chondroitin 4-sulfate
glycosaminoglycan" evidence=IEA] [GO:0030198 "extracellular matrix
organization" evidence=IEA] InterPro:IPR000742 InterPro:IPR003961
Pfam:PF00008 Pfam:PF00041 PROSITE:PS50026 PROSITE:PS50853
SMART:SM00060 SMART:SM00181 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 GO:GO:0030198 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 GO:GO:0010811 InterPro:IPR001791
Pfam:PF00054 SMART:SM00282 PROSITE:PS50025
GeneTree:ENSGT00530000063501 GO:GO:0005604 GO:GO:0005614
Pfam:PF02210 OMA:FMRFKTT GO:GO:0005539 GO:GO:0019800
EMBL:AADN02052267 EMBL:AADN02052268 EMBL:AADN02052269
EMBL:AADN02052270 EMBL:AADN02052271 EMBL:AADN02052272
EMBL:AADN02052273 IPI:IPI00582245 ProteinModelPortal:E1BQW4
Ensembl:ENSGALT00000005914 Uniprot:E1BQW4
Length = 1022
Score = 566 (204.3 bits), Expect = 2.5e-70, Sum P(3) = 2.5e-70
Identities = 133/392 (33%), Positives = 207/392 (52%)
Query: 32 GNKIKGRSK-ECLEDKCNKTPCEHGGKCITTPGSSY-CLCPLGFTGDLCQTRLDLQVPQF 89
G + G EC C++ C + G C + SY CLCPLGF G C+ + L +PQF
Sbjct: 563 GKALSGADVGECSSGICDEASCINSGTCTASKADSYICLCPLGFKGHHCEEAITLAIPQF 622
Query: 90 NGS--SYLRYQG-LGEQ-YLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRY 145
N S S+ L Q YLS ++ + F+ G+LLY+ + + DF+++ + Y
Sbjct: 623 NESLRSFASTPWPLEPQNYLSFMEFEMTFRPDLETGVLLYS-YDTNSK-DFLSINMVAGY 680
Query: 146 VDFTFDLGTGAATLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXX 205
V+F FD G+G A +RS P+SLG+WH+LR++RT ++ LQVD+ + ++ G FTQ
Sbjct: 681 VEFRFDCGSGTAVIRSEEPVSLGQWHELRVSRTAKNGILQVDKQKPVEGMAEGAFTQIKC 740
Query: 206 XXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNCAHPCIT 265
GGVP Y+ V I F G IQK+++N+ +++ + GVN+VN AHPC+
Sbjct: 741 SSEIFLGGVPSYDTVKKNSGILRPFTGSIQKIILNDRTIDVKQDFTFGVNLVNAAHPCVG 800
Query: 266 QPCGSG-SCVPLYDGYKCVCT-----QSCKESHLTEVMCASFDHGASFLHYLDPEIIHSS 319
PC +G SCVP D Y+C C Q C+++ +TE + G S+L Y +P+I+
Sbjct: 801 SPCANGGSCVPKKDSYECDCPLGFDGQHCQKA-ITEAIEIPQFIGRSYLIYDNPDILK-- 857
Query: 320 GLLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSK---DFLALGIHNGYAH 376
+L+ R++G N+ MR KT+ GL++W G S + DF++LG+ G
Sbjct: 858 -------RLN---RVSGSRTNVFMRFKTTMKEGLLMWRGDSPMRPNSDFISLGLQEGALL 907
Query: 377 VMYXXXXXXXXXXXXQTKINNGVWHRLTVHRN 408
Y + ++G WHR+ R+
Sbjct: 908 FSYNLGSGIASIVVNGS-FSDGRWHRVKAVRD 938
Score = 383 (139.9 bits), Expect = 1.5e-44, Sum P(2) = 1.5e-44
Identities = 103/370 (27%), Positives = 166/370 (44%)
Query: 47 CNKTPCEHGGKCITT--PGSSYCLCPLGFTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQY 104
C++T C C+ G S C C LG G+ C + +Q PQF G SY+ ++ L Y
Sbjct: 357 CDETICSADSFCVNDYDRGGSRCHCNLGKGGETCTEDITIQYPQFYGYSYITFEPLKNSY 416
Query: 105 LSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSNP 164
+ +T+ F+A +G+LLY G G GDF++L + R + F F+ GTG A + S N
Sbjct: 417 QTF-QITLEFRAESEDGLLLYCGENEHGRGDFMSLAIIRRSIQFRFNCGTGVAVITSENK 475
Query: 165 ISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSPKV 224
I LG WH + L R G + +L++D S G +++ GG P +
Sbjct: 476 IKLGNWHSITLFRDGLNGWLRMDNDAPVTGKSQGQYSKITFRTPFYVGGAPSVYWLIRAA 535
Query: 225 KIKSSFIGCIQKVLINNHELNI----LGEAIQGVNVVNCAHP-CITQPC-GSGSCVPLY- 277
F GC+Q + +N +++ LG+A+ G +V C+ C C SG+C
Sbjct: 536 GTNRGFQGCVQLLSVNGKMIDMRPWPLGKALSGADVGECSSGICDEASCINSGTCTASKA 595
Query: 278 DGYKCVCTQSCKESHLTEVMCASFDHGASFLHYLDPEIIHSSGLLHYKFQLHVDFRITGY 337
D Y C+C K H E + + L +S + Q ++ F
Sbjct: 596 DSYICLCPLGFKGHHCEEAITLAIPQFNESLRSF------ASTPWPLEPQNYLSFM---- 645
Query: 338 EFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINN 397
EF +M + +G++L++ + SKDFL++ + GY + + ++
Sbjct: 646 EF--EMTFRPDLETGVLLYSYDTNSKDFLSINMVAGYVEFRFDCGSGTAVIRSEEP-VSL 702
Query: 398 GVWHRLTVHR 407
G WH L V R
Sbjct: 703 GQWHELRVSR 712
Score = 258 (95.9 bits), Expect = 8.3e-22, Sum P(2) = 8.3e-22
Identities = 62/223 (27%), Positives = 111/223 (49%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLD--LQVPQFNGSSYLRYQG----- 99
C +PC +GG C+ S C CPLGF G CQ + +++PQF G SYL Y
Sbjct: 798 CVGSPCANGGSCVPKKDSYECDCPLGFDGQHCQKAITEAIEIPQFIGRSYLIYDNPDILK 857
Query: 100 -LGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVG-DFIALYLNDRYVDFTFDLGTGAA 157
L S ++ + FK G+L++ G DFI+L L + + F+++LG+G A
Sbjct: 858 RLNRVSGSRTNVFMRFKTTMKEGLLMWRGDSPMRPNSDFISLGLQEGALLFSYNLGSGIA 917
Query: 158 TLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDY 217
++ + S G WH+++ R G+ + VD + + SPG Q GG+ +
Sbjct: 918 SIVVNGSFSDGRWHRVKAVRDGQSGKVTVDDYGARTGKSPGKMRQLNINGDLYVGGMKEI 977
Query: 218 NIVSPKVKIKSSFIGCIQKVLIN-NHELNILGEAIQGVNVVNC 259
+ + + ++ +GCI + ++ ++ ++++ +A G N+ C
Sbjct: 978 ALHTNRQYLRG-LVGCISHLTLSTDYHISLVEDAADGKNINTC 1019
Score = 125 (49.1 bits), Expect = 2.5e-70, Sum P(3) = 2.5e-70
Identities = 32/87 (36%), Positives = 46/87 (52%)
Query: 439 RTGKQCLIRIDTDYSMQS-ISGGKFEQLNTDSGLYVGGVEDIEELTRSKYHHSFKGWISN 497
R G+ + +D DY ++ S GK QLN + LYVGG+++I T +Y G IS+
Sbjct: 937 RDGQSGKVTVD-DYGARTGKSPGKMRQLNINGDLYVGGMKEIALHTNRQYLRGLVGCISH 995
Query: 498 LILSNDYQVKLPLSRSQGSSCQLTCET 524
L LS DY + L + G + TC T
Sbjct: 996 LTLSTDYHISLVEDAADGKNIN-TCGT 1021
Score = 84 (34.6 bits), Expect = 3.0e-40, Sum P(2) = 3.0e-40
Identities = 20/69 (28%), Positives = 37/69 (53%)
Query: 436 RLHRTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVEDIEELTR-SKYHHSFKGW 494
R+ RT K ++++D ++ ++ G F Q+ S +++GGV + + + S F G
Sbjct: 709 RVSRTAKNGILQVDKQKPVEGMAEGAFTQIKCSSEIFLGGVPSYDTVKKNSGILRPFTGS 768
Query: 495 ISNLILSND 503
I +IL ND
Sbjct: 769 IQKIIL-ND 776
Score = 77 (32.2 bits), Expect = 2.5e-70, Sum P(3) = 2.5e-70
Identities = 13/56 (23%), Positives = 33/56 (58%)
Query: 1 MVKSDNQVILDDWNTVRVFRHRWDAWIQLNDGNKIKGRSKECLEDKCNKTPCEHGG 56
++ S+N++ L +W+++ +FR + W+++++ + G+S+ +TP GG
Sbjct: 469 VITSENKIKLGNWHSITLFRDGLNGWLRMDNDAPVTGKSQGQYSKITFRTPFYVGG 524
Score = 70 (29.7 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 18/72 (25%), Positives = 31/72 (43%)
Query: 339 FNIDMRIKTSSSSGLILWTGSSQSK--DFLALGIHNGYAHVMYXXXXXXXXXXXXQTKIN 396
F I + + S GL+L+ G ++ DF++L I + + KI
Sbjct: 419 FQITLEFRAESEDGLLLYCGENEHGRGDFMSLAIIRRSIQFRFNCGTGVAVITS-ENKIK 477
Query: 397 NGVWHRLTVHRN 408
G WH +T+ R+
Sbjct: 478 LGNWHSITLFRD 489
Score = 51 (23.0 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 11/49 (22%), Positives = 26/49 (53%)
Query: 1 MVKSDNQVILDDWNTVRVFRHRWDAWIQLNDGNKIKGRSKECLED-KCN 48
+++S+ V L W+ +RV R + +Q++ ++G ++ KC+
Sbjct: 693 VIRSEEPVSLGQWHELRVSRTAKNGILQVDKQKPVEGMAEGAFTQIKCS 741
>UNIPROTKB|Q63HQ2 [details] [associations]
symbol:EGFLAM "Pikachurin" species:9606 "Homo sapiens"
[GO:0030054 "cell junction" evidence=IEA] [GO:0005539
"glycosaminoglycan binding" evidence=IEA] [GO:0005604 "basement
membrane" evidence=IEA] [GO:0005614 "interstitial matrix"
evidence=IEA] [GO:0010811 "positive regulation of cell-substrate
adhesion" evidence=IEA] [GO:0019800 "peptide cross-linking via
chondroitin 4-sulfate glycosaminoglycan" evidence=IEA] [GO:0030198
"extracellular matrix organization" evidence=IEA] [GO:0045202
"synapse" evidence=IEA] InterPro:IPR000742 InterPro:IPR003961
Pfam:PF00008 Pfam:PF00041 PROSITE:PS50026 PROSITE:PS50853
SMART:SM00060 SMART:SM00181 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0030054 SUPFAM:SSF49265 GO:GO:0030198 GO:GO:0045202
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 GO:GO:0010811 InterPro:IPR001791 Pfam:PF00054
SMART:SM00282 PROSITE:PS50025 GO:GO:0005604 GO:GO:0005614
EMBL:CH471119 Pfam:PF02210 HSSP:P00740 CTD:133584
HOVERGEN:HBG107839 OrthoDB:EOG434W58 EMBL:AK092479 EMBL:AK092994
EMBL:AK096474 EMBL:AK097549 EMBL:AK291602 EMBL:BX647551
EMBL:AC010338 EMBL:AC010457 EMBL:AC091839 EMBL:BC031251
EMBL:BC033177 EMBL:BC033188 EMBL:BC063822 IPI:IPI00334254
IPI:IPI00376634 IPI:IPI00470484 IPI:IPI00743096 IPI:IPI00867652
RefSeq:NP_001192230.1 RefSeq:NP_689616.2 RefSeq:NP_877950.1
RefSeq:NP_877953.1 UniGene:Hs.20103 ProteinModelPortal:Q63HQ2
SMR:Q63HQ2 STRING:Q63HQ2 PhosphoSite:Q63HQ2 DMDM:158705944
PaxDb:Q63HQ2 PRIDE:Q63HQ2 Ensembl:ENST00000322350
Ensembl:ENST00000336740 Ensembl:ENST00000354891
Ensembl:ENST00000397202 Ensembl:ENST00000397210
Ensembl:ENST00000506135 Ensembl:ENST00000514476 GeneID:133584
KEGG:hsa:133584 UCSC:uc003jlb.2 UCSC:uc003jlc.2 UCSC:uc003jle.2
UCSC:uc003jlf.2 UCSC:uc003jlg.2 GeneCards:GC05P038295
HGNC:HGNC:26810 neXtProt:NX_Q63HQ2 PharmGKB:PA147358056
eggNOG:NOG238064 InParanoid:Q63HQ2 OMA:FMRFKTT ChiTaRS:EGFLAM
GenomeRNAi:133584 NextBio:83236 ArrayExpress:Q63HQ2 Bgee:Q63HQ2
CleanEx:HS_EGFLAM Genevestigator:Q63HQ2 GO:GO:0005539 GO:GO:0019800
Uniprot:Q63HQ2
Length = 1017
Score = 566 (204.3 bits), Expect = 5.5e-69, Sum P(3) = 5.5e-69
Identities = 132/388 (34%), Positives = 199/388 (51%)
Query: 32 GNKIKGRSK-ECLEDKCNKTPCEHGGKCITTPGSSY-CLCPLGFTGDLCQTRLDLQVPQF 89
G + G EC C++ C HGG C SY CLCPLGF G C+ L +PQF
Sbjct: 553 GKALSGADVGECSSGICDEASCIHGGTCTAIKADSYICLCPLGFKGRHCEDAFTLTIPQF 612
Query: 90 NGS--SYLRYQG-LGEQ-YLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRY 145
S SY L Q YLS ++ I F+ +G+LLY+ G DF+++ L +
Sbjct: 613 RESLRSYAATPWPLEPQHYLSFMEFEITFRPDSGDGVLLYSYDT--GSKDFLSINLAGGH 670
Query: 146 VDFTFDLGTGAATLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXX 205
V+F FD G+G LRS +P++LG WH+LR++RT ++ LQVD+ + ++ G FTQ
Sbjct: 671 VEFRFDCGSGTGVLRSEDPLTLGNWHELRVSRTAKNGILQVDKQKIVEGMAEGGFTQIKC 730
Query: 206 XXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNCAHPCIT 265
GGVP+Y+ V + F G IQK+++N+ +++ + GVNV N AHPC+
Sbjct: 731 NTDIFIGGVPNYDDVKKNSGVLKPFSGSIQKIILNDRTIHVKHDFTSGVNVENAAHPCVR 790
Query: 266 QPCG-SGSCVPLYDGYKCVCTQSCKESHLTEVMCASFDHGASFLHYLD-PEIIHSSGLLH 323
PC GSC P +GY C C + H + C ++ + + ++ P+ I S L +
Sbjct: 791 APCAHGGSCRPRKEGYDCDCPLGFEGLHCQKE-CGNYCLN-TIIEAIEIPQFIGRSYLTY 848
Query: 324 YKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSK---DFLALGIHNGYAHVMYX 380
+ R++G N+ MR KT++ GL+LW G S + DF++LG+ +G A V
Sbjct: 849 DNPDILK--RVSGSRSNVFMRFKTTAKDGLLLWRGDSPMRPNSDFISLGLRDG-ALVFSY 905
Query: 381 XXXXXXXXXXXQTKINNGVWHRLTVHRN 408
N+G WHR+ R+
Sbjct: 906 NLGSGVASIMVNGSFNDGRWHRVKAVRD 933
Score = 365 (133.5 bits), Expect = 7.9e-39, Sum P(2) = 7.9e-39
Identities = 102/370 (27%), Positives = 162/370 (43%)
Query: 47 CNKTPCEHGGKCIT--TPGSSYCLCPLGFTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQY 104
C++T C C+ T G S C C LG G+ C + +Q PQF G SY+ ++ L Y
Sbjct: 347 CDETLCSADSFCVNDYTWGGSRCQCTLGKGGESCSEDIVIQYPQFFGHSYVTFEPLKNSY 406
Query: 105 LSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSNP 164
+ +T+ F+A +G+LLY G G GDF++L + R + F F+ GTG A + S
Sbjct: 407 QAF-QITLEFRAEAEDGLLLYCGENEHGRGDFMSLAIIRRSLQFRFNCGTGVAIIVSETK 465
Query: 165 ISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSPKV 224
I LG WH + L R G + LQ++ S G +++ GG P +
Sbjct: 466 IKLGGWHTVMLYRDGLNGLLQLNNGTPVTGQSQGQYSKITFRTPLYLGGAPSAYWLVRAT 525
Query: 225 KIKSSFIGCIQKVLINNHELNI----LGEAIQGVNVVNCAHP-CITQPC-GSGSCVPLY- 277
F GC+Q + +N +++ LG+A+ G +V C+ C C G+C +
Sbjct: 526 GTNRGFQGCVQSLAVNGRRIDMRPWPLGKALSGADVGECSSGICDEASCIHGGTCTAIKA 585
Query: 278 DGYKCVCTQSCKESHLTEVMCASFDHGASFLHYLDPEIIHSSGLLHYKFQLHVDFRITGY 337
D Y C+C K H + + F E + S + L ++
Sbjct: 586 DSYICLCPLGFKGRHCEDAFTLTIPQ---FR-----ESLRSYAATPWP--LEPQHYLSFM 635
Query: 338 EFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINN 397
EF I R S G++L++ + SKDFL++ + G+ + + +
Sbjct: 636 EFEITFR--PDSGDGVLLYSYDTGSKDFLSINLAGGHVEFRFDCGSGTGVLRS-EDPLTL 692
Query: 398 GVWHRLTVHR 407
G WH L V R
Sbjct: 693 GNWHELRVSR 702
Score = 253 (94.1 bits), Expect = 3.0e-21, Sum P(2) = 3.0e-21
Identities = 65/228 (28%), Positives = 111/228 (48%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQ---------TRLD-LQVPQFNGSSYLR 96
C + PC HGG C C CPLGF G CQ T ++ +++PQF G SYL
Sbjct: 788 CVRAPCAHGGSCRPRKEGYDCDCPLGFEGLHCQKECGNYCLNTIIEAIEIPQFIGRSYLT 847
Query: 97 YQG---LGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVG-DFIALYLNDRYVDFTFDL 152
Y L S ++ + FK +G+LL+ G DFI+L L D + F+++L
Sbjct: 848 YDNPDILKRVSGSRSNVFMRFKTTAKDGLLLWRGDSPMRPNSDFISLGLRDGALVFSYNL 907
Query: 153 GTGAATLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXG 212
G+G A++ + + G WH+++ R G+ + VD + + SPG Q G
Sbjct: 908 GSGVASIMVNGSFNDGRWHRVKAVRDGQSGKITVDDYGARTGKSPGMMRQLNINGALYVG 967
Query: 213 GVPDYNIVSPKVKIKSSFIGCIQK-VLINNHELNILGEAIQGVNVVNC 259
G+ + + + + ++ +GCI L ++ ++++ +A+ G N+ C
Sbjct: 968 GMKEIALHTNRQYMRG-LVGCISHFTLSTDYHISLVEDAVDGKNINTC 1014
Score = 112 (44.5 bits), Expect = 5.5e-69, Sum P(3) = 5.5e-69
Identities = 30/85 (35%), Positives = 42/85 (49%)
Query: 439 RTGKQCLIRIDTDYSMQS-ISGGKFEQLNTDSGLYVGGVEDIEELTRSKYHHSFKGWISN 497
R G+ I +D DY ++ S G QLN + LYVGG+++I T +Y G IS+
Sbjct: 932 RDGQSGKITVD-DYGARTGKSPGMMRQLNINGALYVGGMKEIALHTNRQYMRGLVGCISH 990
Query: 498 LILSNDYQVKLPLSRSQGSSCQLTC 522
LS DY + L G + TC
Sbjct: 991 FTLSTDYHISLVEDAVDGKNIN-TC 1014
Score = 87 (35.7 bits), Expect = 3.3e-36, Sum P(2) = 3.3e-36
Identities = 19/69 (27%), Positives = 40/69 (57%)
Query: 436 RLHRTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVEDIEELTR-SKYHHSFKGW 494
R+ RT K ++++D ++ ++ G F Q+ ++ +++GGV + +++ + S F G
Sbjct: 699 RVSRTAKNGILQVDKQKIVEGMAEGGFTQIKCNTDIFIGGVPNYDDVKKNSGVLKPFSGS 758
Query: 495 ISNLILSND 503
I +IL ND
Sbjct: 759 IQKIIL-ND 766
Score = 77 (32.2 bits), Expect = 5.5e-69, Sum P(3) = 5.5e-69
Identities = 16/56 (28%), Positives = 31/56 (55%)
Query: 1 MVKSDNQVILDDWNTVRVFRHRWDAWIQLNDGNKIKGRSKECLEDKCNKTPCEHGG 56
++ S+ ++ L W+TV ++R + +QLN+G + G+S+ +TP GG
Sbjct: 459 IIVSETKIKLGGWHTVMLYRDGLNGLLQLNNGTPVTGQSQGQYSKITFRTPLYLGG 514
Score = 69 (29.3 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 23/100 (23%), Positives = 45/100 (45%)
Query: 339 FNIDMRIKTSSSSGLILWTGSSQSK--DFLALGIHNGYAHVMYXXXXXXXXXXXXQTKIN 396
F I + + + GL+L+ G ++ DF++L I + +TKI
Sbjct: 409 FQITLEFRAEAEDGLLLYCGENEHGRGDFMSLAIIRRSLQFRFNCGTGVAIIVS-ETKIK 467
Query: 397 NGVWHRLTVHRN----FMVVMHGSSHTRSNKS--SKIEFK 430
G WH + ++R+ + + +G+ T ++ SKI F+
Sbjct: 468 LGGWHTVMLYRDGLNGLLQLNNGTPVTGQSQGQYSKITFR 507
>UNIPROTKB|A3KN33 [details] [associations]
symbol:EGFLAM "Pikachurin" species:9913 "Bos taurus"
[GO:0045202 "synapse" evidence=IEA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] InterPro:IPR000742 InterPro:IPR003961 Pfam:PF00008
Pfam:PF00041 PROSITE:PS50026 PROSITE:PS50853 SMART:SM00060
SMART:SM00181 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0030054
SUPFAM:SSF49265 GO:GO:0005578 GO:GO:0045202 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186 eggNOG:NOG312635
InterPro:IPR001791 Pfam:PF00054 SMART:SM00282 PROSITE:PS50025
Pfam:PF02210 EMBL:BC133537 IPI:IPI00707738 RefSeq:NP_001076947.1
UniGene:Bt.12654 ProteinModelPortal:A3KN33 STRING:A3KN33
PRIDE:A3KN33 GeneID:534427 KEGG:bta:534427 CTD:133584
HOGENOM:HOG000112344 HOVERGEN:HBG107839 InParanoid:A3KN33
OrthoDB:EOG434W58 NextBio:20876399 Uniprot:A3KN33
Length = 1018
Score = 552 (199.4 bits), Expect = 2.0e-67, Sum P(3) = 2.0e-67
Identities = 129/391 (32%), Positives = 198/391 (50%)
Query: 32 GNKIKGRSK-ECLEDKCNKTPCEHGGKCITTPGSSY-CLCPLGFTGDLCQTRLDLQVPQF 89
G + G EC C++ C +GG C+ + SY CLCPLGF G C+ L +PQF
Sbjct: 562 GKALSGADVGECSSGICDEASCINGGTCMASKADSYICLCPLGFRGRHCEDAFTLTIPQF 621
Query: 90 NGS--SYLRYQGLGE--QYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRY 145
S SY E YLS ++ + F+ +G+LLY+ G DF+++ + +
Sbjct: 622 KESLRSYAATPWPLEPRHYLSFMEFEVTFRPDSEDGVLLYSYDT--GSKDFLSINMAGGH 679
Query: 146 VDFTFDLGTGAATLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXX 205
V+F FD G+G LRS P++LG WH+L ++RT ++ LQVD+ + + ++ G FTQ
Sbjct: 680 VEFRFDCGSGTGVLRSEEPLTLGHWHELCVSRTAKNGILQVDKQKAVEGMAEGGFTQIKC 739
Query: 206 XXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNCAHPCIT 265
GGVP+Y+ V I F G IQK+++N+ +++ + GVNV N AHPC+
Sbjct: 740 NSDIFIGGVPNYDDVKKNSGILKPFSGSIQKIILNDRTIHVKHDFTWGVNVENAAHPCVG 799
Query: 266 QPCG-SGSCVPLYDGYKCVCTQSCKESHLTEVMCASFDH----GASFLHYLDPEIIHSSG 320
PC GSC P +GY+C C + H + + + + G S+L Y +P+I+
Sbjct: 800 SPCAHGGSCRPRKEGYECDCPLGFEGLHCQKAITEAIEIPQFIGRSYLTYDNPDILK--- 856
Query: 321 LLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSK---DFLALGIHNGYAHV 377
R++G N MR KT++ GL+LW G S + DF++LG+ +G A V
Sbjct: 857 ------------RVSGSRSNAFMRFKTTAKDGLLLWRGDSPMRPNSDFISLGLRDG-ALV 903
Query: 378 MYXXXXXXXXXXXXQTKINNGVWHRLTVHRN 408
N+G WHR+ R+
Sbjct: 904 FSYNLGSGVASIMVNGSFNDGRWHRVKAVRD 934
Score = 359 (131.4 bits), Expect = 7.4e-38, Sum P(2) = 7.4e-38
Identities = 101/373 (27%), Positives = 164/373 (43%)
Query: 44 EDKCNKTPCEHGGKCIT--TPGSSYCLCPLGFTGDLCQTRLDLQVPQFNGSSYLRYQGLG 101
+ C++T C C++ T G S C C LG G+ C + +Q PQF G SY+ ++ L
Sbjct: 353 DTSCDETVCSADSFCVSDYTWGGSRCHCNLGKGGESCSEDIVIQYPQFFGHSYVTFEPLK 412
Query: 102 EQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRS 161
Y + +T+ F+A +G+LLY G G GDF++L + R + F F+ GTG A + S
Sbjct: 413 NSYQAF-QITLEFRAEAEDGLLLYCGENEHGRGDFMSLAVIRRSLQFRFNCGTGVAIIVS 471
Query: 162 SNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVS 221
I LG WH + L R G + LQ++ S G +++ GG P +
Sbjct: 472 ETKIKLGGWHTVTLYRDGLNGLLQLNNGTPVTGQSQGQYSKITFRTPLYLGGAPSAYWLV 531
Query: 222 PKVKIKSSFIGCIQKVLINNHELNI----LGEAIQGVNVVNCAHP-CITQPC-GSGSCVP 275
F GC+Q + +N L++ LG+A+ G +V C+ C C G+C+
Sbjct: 532 RATGTNRGFQGCVQALTVNGKRLDLRPWPLGKALSGADVGECSSGICDEASCINGGTCMA 591
Query: 276 LY-DGYKCVCTQSCKESHLTEVMCASFDHGASFLHYLDPEIIHSSGLLHYKFQLHVDFRI 334
D Y C+C + H + + F E + S + L +
Sbjct: 592 SKADSYICLCPLGFRGRHCEDAFTLTIPQ---F-----KESLRSYAATPWP--LEPRHYL 641
Query: 335 TGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTK 394
+ EF + R S G++L++ + SKDFL++ + G+ + +
Sbjct: 642 SFMEFEVTFR--PDSEDGVLLYSYDTGSKDFLSINMAGGHVEFRFDCGSGTGVLRSEEP- 698
Query: 395 INNGVWHRLTVHR 407
+ G WH L V R
Sbjct: 699 LTLGHWHELCVSR 711
Score = 265 (98.3 bits), Expect = 1.3e-22, Sum P(2) = 1.3e-22
Identities = 64/220 (29%), Positives = 108/220 (49%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLD--LQVPQFNGSSYLRYQG---LG 101
C +PC HGG C C CPLGF G CQ + +++PQF G SYL Y L
Sbjct: 797 CVGSPCAHGGSCRPRKEGYECDCPLGFEGLHCQKAITEAIEIPQFIGRSYLTYDNPDILK 856
Query: 102 EQYLSLLDLTIVFKAIEPNGILLYNGHRADGVG-DFIALYLNDRYVDFTFDLGTGAATLR 160
S + + FK +G+LL+ G DFI+L L D + F+++LG+G A++
Sbjct: 857 RVSGSRSNAFMRFKTTAKDGLLLWRGDSPMRPNSDFISLGLRDGALVFSYNLGSGVASIM 916
Query: 161 SSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIV 220
+ + G WH+++ R G+ + VD + + SPG Q GG+ + +
Sbjct: 917 VNGSFNDGRWHRVKAVRDGQSGKITVDDYGARTGKSPGMMRQLNINGALYVGGMKEIALH 976
Query: 221 SPKVKIKSSFIGCIQK-VLINNHELNILGEAIQGVNVVNC 259
+ + ++ +GCI L ++ ++++ +A+ G N+ C
Sbjct: 977 TNRQYMRG-LVGCISHFTLSTDYHISLVEDAVDGKNINTC 1015
Score = 112 (44.5 bits), Expect = 2.0e-67, Sum P(3) = 2.0e-67
Identities = 30/85 (35%), Positives = 42/85 (49%)
Query: 439 RTGKQCLIRIDTDYSMQS-ISGGKFEQLNTDSGLYVGGVEDIEELTRSKYHHSFKGWISN 497
R G+ I +D DY ++ S G QLN + LYVGG+++I T +Y G IS+
Sbjct: 933 RDGQSGKITVD-DYGARTGKSPGMMRQLNINGALYVGGMKEIALHTNRQYMRGLVGCISH 991
Query: 498 LILSNDYQVKLPLSRSQGSSCQLTC 522
LS DY + L G + TC
Sbjct: 992 FTLSTDYHISLVEDAVDGKNIN-TC 1015
Score = 88 (36.0 bits), Expect = 2.5e-35, Sum P(2) = 2.5e-35
Identities = 19/66 (28%), Positives = 39/66 (59%)
Query: 439 RTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVEDIEELTR-SKYHHSFKGWISN 497
RT K ++++D +++ ++ G F Q+ +S +++GGV + +++ + S F G I
Sbjct: 711 RTAKNGILQVDKQKAVEGMAEGGFTQIKCNSDIFIGGVPNYDDVKKNSGILKPFSGSIQK 770
Query: 498 LILSND 503
+IL ND
Sbjct: 771 IIL-ND 775
Score = 77 (32.2 bits), Expect = 2.0e-67, Sum P(3) = 2.0e-67
Identities = 16/56 (28%), Positives = 31/56 (55%)
Query: 1 MVKSDNQVILDDWNTVRVFRHRWDAWIQLNDGNKIKGRSKECLEDKCNKTPCEHGG 56
++ S+ ++ L W+TV ++R + +QLN+G + G+S+ +TP GG
Sbjct: 468 IIVSETKIKLGGWHTVTLYRDGLNGLLQLNNGTPVTGQSQGQYSKITFRTPLYLGG 523
Score = 74 (31.1 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 23/100 (23%), Positives = 46/100 (46%)
Query: 339 FNIDMRIKTSSSSGLILWTGSSQSK--DFLALGIHNGYAHVMYXXXXXXXXXXXXQTKIN 396
F I + + + GL+L+ G ++ DF++L + + +TKI
Sbjct: 418 FQITLEFRAEAEDGLLLYCGENEHGRGDFMSLAVIRRSLQFRFNCGTGVAIIVS-ETKIK 476
Query: 397 NGVWHRLTVHRN----FMVVMHGSSHTRSNKS--SKIEFK 430
G WH +T++R+ + + +G+ T ++ SKI F+
Sbjct: 477 LGGWHTVTLYRDGLNGLLQLNNGTPVTGQSQGQYSKITFR 516
>MGI|MGI:2146149 [details] [associations]
symbol:Egflam "EGF-like, fibronectin type III and laminin G
domains" species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005539 "glycosaminoglycan binding" evidence=IDA]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=IEA] [GO:0005604
"basement membrane" evidence=IDA] [GO:0005614 "interstitial matrix"
evidence=IDA] [GO:0010811 "positive regulation of cell-substrate
adhesion" evidence=IDA] [GO:0019800 "peptide cross-linking via
chondroitin 4-sulfate glycosaminoglycan" evidence=IDA] [GO:0030054
"cell junction" evidence=IEA] [GO:0030198 "extracellular matrix
organization" evidence=IDA] [GO:0031012 "extracellular matrix"
evidence=IDA] [GO:0045202 "synapse" evidence=IEA]
InterPro:IPR000742 InterPro:IPR003961 Pfam:PF00008 Pfam:PF00041
PROSITE:PS50026 PROSITE:PS50853 SMART:SM00060 SMART:SM00181
MGI:MGI:2146149 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0030054
SUPFAM:SSF49265 GO:GO:0030198 GO:GO:0045202 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186 GO:GO:0010811
InterPro:IPR001791 Pfam:PF00054 SMART:SM00282 PROSITE:PS50025
GeneTree:ENSGT00530000063501 GO:GO:0005604 GO:GO:0005614
Pfam:PF02210 HSSP:P00740 CTD:133584 HOGENOM:HOG000112344
HOVERGEN:HBG107839 OrthoDB:EOG434W58 eggNOG:NOG238064 OMA:FMRFKTT
GO:GO:0005539 GO:GO:0019800 EMBL:DQ223720 EMBL:AK031136
EMBL:AK033332 EMBL:AK037223 EMBL:AK041546 EMBL:AC105969
EMBL:AC158747 EMBL:BC051455 EMBL:BC095994 EMBL:BC150710
IPI:IPI00221657 IPI:IPI00756051 RefSeq:NP_848863.1
UniGene:Mm.203208 ProteinModelPortal:Q4VBE4 SMR:Q4VBE4
IntAct:Q4VBE4 STRING:Q4VBE4 PhosphoSite:Q4VBE4 PaxDb:Q4VBE4
PRIDE:Q4VBE4 Ensembl:ENSMUST00000058593 Ensembl:ENSMUST00000096494
GeneID:268780 KEGG:mmu:268780 UCSC:uc007vea.1 UCSC:uc007veb.1
InParanoid:Q4VBE4 NextBio:392491 Bgee:Q4VBE4 Genevestigator:Q4VBE4
Uniprot:Q4VBE4
Length = 1017
Score = 539 (194.8 bits), Expect = 1.1e-65, Sum P(3) = 1.1e-65
Identities = 131/388 (33%), Positives = 196/388 (50%)
Query: 32 GNKIKGRSK-ECLEDKCNKTPCEHGGKCITTPGSSY-CLCPLGFTGDLCQTRLDLQVPQF 89
G + G EC C++ C HGG C SY CLCPLGF G C+ L +PQF
Sbjct: 553 GKALNGADVGECSSGICDEASCIHGGTCAAIKADSYICLCPLGFRGRHCEDAFALTIPQF 612
Query: 90 NGS--SYLRYQG-LGEQ-YLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRY 145
S SY L Q YLS + I F+ +G+LLY+ G DF+++ + +
Sbjct: 613 RESLRSYAATPWPLEPQHYLSFTEFEITFRPDSGDGVLLYSYDT--GSKDFLSINMAAGH 670
Query: 146 VDFTFDLGTGAATLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXX 205
V+F FD G+G LRS P++LG+WH LR++RT ++ LQVD+ + ++ G FTQ
Sbjct: 671 VEFRFDCGSGTGVLRSEAPLTLGQWHDLRVSRTAKNGILQVDKQKVVEGMAEGGFTQIKC 730
Query: 206 XXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNCAHPCIT 265
GGVP+Y+ V I F G IQK+++N+ +++ + GVNV N AHPC+
Sbjct: 731 NTDIFIGGVPNYDDVKKNSGILHPFSGSIQKIILNDRTIHVKHDFTSGVNVENAAHPCVG 790
Query: 266 QPCG-SGSCVPLYDGYKCVCTQSCKESHLTEVMCASFDHGASFLHYLD-PEIIHSSGLLH 323
PC GSC P +GY+C C E + C + + + ++ P+ I S L
Sbjct: 791 APCAHGGSCRPRKEGYECDCPLGF-EGLNCQKECGNHCLN-TIIEAIEIPQFIGRS-YLT 847
Query: 324 YKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSK---DFLALGIHNGYAHVMYX 380
Y ++ R++G N MR KT++ GL+LW G S + DF++LG+ +G A +
Sbjct: 848 YD-NPNILKRVSGSRSNAFMRFKTTAKDGLLLWRGDSPMRPNSDFISLGLRDG-ALIFSY 905
Query: 381 XXXXXXXXXXXQTKINNGVWHRLTVHRN 408
++G WHR+ R+
Sbjct: 906 NLGSGVASIMVNGSFSDGRWHRVKAVRD 933
Score = 351 (128.6 bits), Expect = 1.8e-36, Sum P(2) = 1.8e-36
Identities = 101/370 (27%), Positives = 161/370 (43%)
Query: 47 CNKTPCEHGGKCITTP--GSSYCLCPLGFTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQY 104
C++T C C+ G S C C LG G+ C + +Q PQF G SY+ ++ L Y
Sbjct: 347 CDETLCSADSFCVNDYAWGGSRCHCNLGKGGEACSEDIFIQYPQFFGHSYVTFEPLKNSY 406
Query: 105 LSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSNP 164
+ +T+ F+A +G+LLY G G GDF++L L R + F F+ GTG A + S
Sbjct: 407 QAF-QVTLEFRAEAEDGLLLYCGESEHGRGDFMSLALIRRSLHFRFNCGTGIAIIISETK 465
Query: 165 ISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSPKV 224
I LG WH + L R G + LQ++ S G +++ GG P +
Sbjct: 466 IKLGAWHTVTLYRDGLNGMLQLNNGTPVTGQSQGQYSKITFRTPLYLGGAPSAYWLVRAT 525
Query: 225 KIKSSFIGCIQKVLINNHELNI----LGEAIQGVNVVNCAHP-CITQPC-GSGSCVPLY- 277
F GC+Q + +N ++++ LG+A+ G +V C+ C C G+C +
Sbjct: 526 GTNRGFQGCVQSLSVNGKKIDMRPWPLGKALNGADVGECSSGICDEASCIHGGTCAAIKA 585
Query: 278 DGYKCVCTQSCKESHLTEVMCASFDHGASFLHYLDPEIIHSSGLLHYKFQLHVDFRITGY 337
D Y C+C + H + + F E + S + + T
Sbjct: 586 DSYICLCPLGFRGRHCEDAFALTIPQ---FR-----ESLRSYAATPWPLEPQHYLSFT-- 635
Query: 338 EFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINN 397
EF I R S G++L++ + SKDFL++ + G+ + + +
Sbjct: 636 EFEITFR--PDSGDGVLLYSYDTGSKDFLSINMAAGHVEFRFDCGSGTGVLRS-EAPLTL 692
Query: 398 GVWHRLTVHR 407
G WH L V R
Sbjct: 693 GQWHDLRVSR 702
Score = 251 (93.4 bits), Expect = 6.3e-21, Sum P(2) = 6.3e-21
Identities = 66/228 (28%), Positives = 109/228 (47%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQ---------TRLD-LQVPQFNGSSYLR 96
C PC HGG C C CPLGF G CQ T ++ +++PQF G SYL
Sbjct: 788 CVGAPCAHGGSCRPRKEGYECDCPLGFEGLNCQKECGNHCLNTIIEAIEIPQFIGRSYLT 847
Query: 97 YQG---LGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVG-DFIALYLNDRYVDFTFDL 152
Y L S + + FK +G+LL+ G DFI+L L D + F+++L
Sbjct: 848 YDNPNILKRVSGSRSNAFMRFKTTAKDGLLLWRGDSPMRPNSDFISLGLRDGALIFSYNL 907
Query: 153 GTGAATLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXG 212
G+G A++ + S G WH+++ R G+ + VD + + SPG Q G
Sbjct: 908 GSGVASIMVNGSFSDGRWHRVKAVRDGQSGKITVDDYGARTGKSPGLMRQLNINGALYVG 967
Query: 213 GVPDYNIVSPKVKIKSSFIGCIQK-VLINNHELNILGEAIQGVNVVNC 259
G+ + + + + ++ +GCI L ++ ++++ +A+ G N+ C
Sbjct: 968 GMKEIALHTNRQYLRG-LVGCISHFTLSTDYHISLVEDAVDGKNINTC 1014
Score = 110 (43.8 bits), Expect = 1.1e-65, Sum P(3) = 1.1e-65
Identities = 30/85 (35%), Positives = 42/85 (49%)
Query: 439 RTGKQCLIRIDTDYSMQS-ISGGKFEQLNTDSGLYVGGVEDIEELTRSKYHHSFKGWISN 497
R G+ I +D DY ++ S G QLN + LYVGG+++I T +Y G IS+
Sbjct: 932 RDGQSGKITVD-DYGARTGKSPGLMRQLNINGALYVGGMKEIALHTNRQYLRGLVGCISH 990
Query: 498 LILSNDYQVKLPLSRSQGSSCQLTC 522
LS DY + L G + TC
Sbjct: 991 FTLSTDYHISLVEDAVDGKNIN-TC 1014
Score = 96 (38.9 bits), Expect = 5.2e-35, Sum P(2) = 5.2e-35
Identities = 20/69 (28%), Positives = 41/69 (59%)
Query: 436 RLHRTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVEDIEELTR-SKYHHSFKGW 494
R+ RT K ++++D ++ ++ G F Q+ ++ +++GGV + +++ + S H F G
Sbjct: 699 RVSRTAKNGILQVDKQKVVEGMAEGGFTQIKCNTDIFIGGVPNYDDVKKNSGILHPFSGS 758
Query: 495 ISNLILSND 503
I +IL ND
Sbjct: 759 IQKIIL-ND 766
Score = 88 (36.0 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 26/100 (26%), Positives = 48/100 (48%)
Query: 339 FNIDMRIKTSSSSGLILWTGSSQSK--DFLALGIHNGYAHVMYXXXXXXXXXXXXQTKIN 396
F + + + + GL+L+ G S+ DF++L + H + +TKI
Sbjct: 409 FQVTLEFRAEAEDGLLLYCGESEHGRGDFMSLALIRRSLHFRFNCGTGIAIIIS-ETKIK 467
Query: 397 NGVWHRLTVHR---NFMVVMH-GSSHTRSNKS--SKIEFK 430
G WH +T++R N M+ ++ G+ T ++ SKI F+
Sbjct: 468 LGAWHTVTLYRDGLNGMLQLNNGTPVTGQSQGQYSKITFR 507
Score = 76 (31.8 bits), Expect = 1.1e-65, Sum P(3) = 1.1e-65
Identities = 16/56 (28%), Positives = 31/56 (55%)
Query: 1 MVKSDNQVILDDWNTVRVFRHRWDAWIQLNDGNKIKGRSKECLEDKCNKTPCEHGG 56
++ S+ ++ L W+TV ++R + +QLN+G + G+S+ +TP GG
Sbjct: 459 IIISETKIKLGAWHTVTLYRDGLNGMLQLNNGTPVTGQSQGQYSKITFRTPLYLGG 514
>UNIPROTKB|F1N606 [details] [associations]
symbol:EGFLAM "Pikachurin" species:9913 "Bos taurus"
[GO:0030198 "extracellular matrix organization" evidence=IEA]
[GO:0019800 "peptide cross-linking via chondroitin 4-sulfate
glycosaminoglycan" evidence=IEA] [GO:0010811 "positive regulation
of cell-substrate adhesion" evidence=IEA] [GO:0005614 "interstitial
matrix" evidence=IEA] [GO:0005604 "basement membrane" evidence=IEA]
[GO:0005539 "glycosaminoglycan binding" evidence=IEA]
InterPro:IPR000742 InterPro:IPR003961 Pfam:PF00008 Pfam:PF00041
PROSITE:PS50026 PROSITE:PS50853 SMART:SM00060 SMART:SM00181
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265 GO:GO:0030198
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 GO:GO:0010811 InterPro:IPR001791 Pfam:PF00054
SMART:SM00282 PROSITE:PS50025 GeneTree:ENSGT00530000063501
GO:GO:0005604 GO:GO:0005614 Pfam:PF02210 OMA:FMRFKTT GO:GO:0005539
GO:GO:0019800 EMBL:DAAA02050595 IPI:IPI00999581
Ensembl:ENSBTAT00000026111 Uniprot:F1N606
Length = 904
Score = 541 (195.5 bits), Expect = 4.6e-57, Sum P(2) = 4.6e-57
Identities = 123/356 (34%), Positives = 188/356 (52%)
Query: 32 GNKIKGRSK-ECLEDKCNKTPCEHGGKCITTPGSSY-CLCPLGFTGDLCQTRLDLQVPQF 89
G + G EC C++ C +GG C+ + SY CLCPLGF G C+ L +PQF
Sbjct: 562 GKALSGADVGECSSGICDEASCINGGTCMASKADSYICLCPLGFRGRHCEDAFTLTIPQF 621
Query: 90 NGS--SYLRYQGLGE--QYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRY 145
S SY E YLS ++ I F+ +G+LLY+ G DF+++ + +
Sbjct: 622 KESLRSYAATPWPLEPRHYLSFMEFEITFRPDSEDGVLLYSYDT--GSKDFLSINMAGGH 679
Query: 146 VDFTFDLGTGAATLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXX 205
V+F FD G+G LRS P++LG WH+LR++RT ++ LQVD+ + + ++ G FTQ
Sbjct: 680 VEFRFDCGSGTGVLRSEEPLTLGHWHELRVSRTAKNGILQVDKQKAVEGMAEGGFTQIKC 739
Query: 206 XXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNCAHPCIT 265
GGVP+Y+ V I F G IQK+++N+ +++ + GVNV N AHPC+
Sbjct: 740 NSDIFIGGVPNYDDVKKNSGILKPFSGSIQKIILNDRTIHVKHDFTWGVNVENAAHPCVG 799
Query: 266 QPCG-SGSCVPLYDGYKCVCTQSCKESHLTEVMCASFDH----GASFLHYLDPEIIHSSG 320
PC GSC P +GY+C C + H + + + + G S+L Y +P+I+
Sbjct: 800 SPCAHGGSCRPRKEGYECDCPLGFEGLHCQKAITEAIEIPQFIGRSYLTYDNPDILK--- 856
Query: 321 LLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSK---DFLALGIHNG 373
R++G N MR KT++ GL+LW G S + DF++LG+ +G
Sbjct: 857 ------------RVSGSRSNAFMRFKTTAKDGLLLWRGDSPMRPNSDFISLGLRDG 900
Score = 360 (131.8 bits), Expect = 3.3e-36, Sum P(2) = 3.3e-36
Identities = 102/373 (27%), Positives = 164/373 (43%)
Query: 44 EDKCNKTPCEHGGKCIT--TPGSSYCLCPLGFTGDLCQTRLDLQVPQFNGSSYLRYQGLG 101
+ C++T C C++ T G S C C LG G+ C + +Q PQF G SY+ ++ L
Sbjct: 353 DTSCDETVCSADSFCVSDYTWGGSRCHCNLGKGGESCSEDIVIQYPQFFGHSYVTFEPLK 412
Query: 102 EQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRS 161
Y + +T+ F+A +G+LLY G G GDF++L + R + F F+ GTG A + S
Sbjct: 413 NSYQAF-QITLEFRAEAEDGLLLYCGENEHGRGDFMSLAVIRRSLQFRFNCGTGVAIIVS 471
Query: 162 SNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVS 221
I LG WH + L R G + LQ++ S G +++ GG P +
Sbjct: 472 ETKIKLGGWHTVTLYRDGLNGLLQLNNGTPVTGQSQGQYSKITFRTPLYLGGAPSAYWLV 531
Query: 222 PKVKIKSSFIGCIQKVLINNHELNI----LGEAIQGVNVVNCAHP-CITQPC-GSGSCVP 275
F GC+Q + +N L++ LG+A+ G +V C+ C C G+C+
Sbjct: 532 RATGTNRGFQGCVQALTVNGKRLDLRPWPLGKALSGADVGECSSGICDEASCINGGTCMA 591
Query: 276 LY-DGYKCVCTQSCKESHLTEVMCASFDHGASFLHYLDPEIIHSSGLLHYKFQLHVDFRI 334
D Y C+C + H + + F E + S + L +
Sbjct: 592 SKADSYICLCPLGFRGRHCEDAFTLTIPQ---F-----KESLRSYAATPWP--LEPRHYL 641
Query: 335 TGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTK 394
+ EF I R S G++L++ + SKDFL++ + G+ + +
Sbjct: 642 SFMEFEITFR--PDSEDGVLLYSYDTGSKDFLSINMAGGHVEFRFDCGSGTGVLRSEEP- 698
Query: 395 INNGVWHRLTVHR 407
+ G WH L V R
Sbjct: 699 LTLGHWHELRVSR 711
Score = 93 (37.8 bits), Expect = 3.3e-36, Sum P(2) = 3.3e-36
Identities = 20/69 (28%), Positives = 41/69 (59%)
Query: 436 RLHRTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVEDIEELTR-SKYHHSFKGW 494
R+ RT K ++++D +++ ++ G F Q+ +S +++GGV + +++ + S F G
Sbjct: 708 RVSRTAKNGILQVDKQKAVEGMAEGGFTQIKCNSDIFIGGVPNYDDVKKNSGILKPFSGS 767
Query: 495 ISNLILSND 503
I +IL ND
Sbjct: 768 IQKIIL-ND 775
Score = 77 (32.2 bits), Expect = 4.6e-57, Sum P(2) = 4.6e-57
Identities = 16/56 (28%), Positives = 31/56 (55%)
Query: 1 MVKSDNQVILDDWNTVRVFRHRWDAWIQLNDGNKIKGRSKECLEDKCNKTPCEHGG 56
++ S+ ++ L W+TV ++R + +QLN+G + G+S+ +TP GG
Sbjct: 468 IIVSETKIKLGGWHTVTLYRDGLNGLLQLNNGTPVTGQSQGQYSKITFRTPLYLGG 523
>RGD|1306592 [details] [associations]
symbol:Egflam "EGF-like, fibronectin type III and laminin G
domains" species:10116 "Rattus norvegicus" [GO:0005539
"glycosaminoglycan binding" evidence=IEA;ISO] [GO:0005578
"proteinaceous extracellular matrix" evidence=IEA] [GO:0005604
"basement membrane" evidence=IEA;ISO] [GO:0005614 "interstitial
matrix" evidence=IEA;ISO] [GO:0010811 "positive regulation of
cell-substrate adhesion" evidence=IEA;ISO] [GO:0019800 "peptide
cross-linking via chondroitin 4-sulfate glycosaminoglycan"
evidence=IEA;ISO] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030198 "extracellular matrix organization" evidence=IEA;ISO]
[GO:0031012 "extracellular matrix" evidence=ISO] [GO:0045202
"synapse" evidence=IEA] InterPro:IPR000742 InterPro:IPR003961
Pfam:PF00008 Pfam:PF00041 PROSITE:PS50026 PROSITE:PS50853
SMART:SM00060 SMART:SM00181 RGD:1306592 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0030054 SUPFAM:SSF49265 GO:GO:0005578
GO:GO:0045202 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 eggNOG:NOG312635 InterPro:IPR001791
Pfam:PF00054 SMART:SM00282 PROSITE:PS50025 Pfam:PF02210 CTD:133584
HOGENOM:HOG000112344 HOVERGEN:HBG107839 EMBL:AABR03012233
EMBL:AABR03012676 EMBL:AABR03016535 EMBL:BC168173 IPI:IPI00367947
RefSeq:NP_001102408.2 UniGene:Rn.27713 ProteinModelPortal:B4F785
STRING:B4F785 PRIDE:B4F785 GeneID:365691 KEGG:rno:365691
UCSC:RGD:1306592 NextBio:687885 ArrayExpress:B4F785
Genevestigator:B4F785 Uniprot:B4F785
Length = 1005
Score = 536 (193.7 bits), Expect = 1.8e-55, Sum P(2) = 1.8e-55
Identities = 150/468 (32%), Positives = 231/468 (49%)
Query: 32 GNKIKGRSK-ECLEDKCNKTPCEHGGKCITTPGSSY-CLCPLGFTGDLCQTRLDLQVPQF 89
G + G EC C++ C +GG C SY CLCPLGF G C+ L +PQF
Sbjct: 549 GKALNGADVGECSSGICDEASCINGGTCAAIKADSYICLCPLGFRGRHCEDAFTLTIPQF 608
Query: 90 NGS--SYLRYQG-LGEQ-YLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRY 145
S SY L Q YLS + I F+ +G+LLY+ + DF+++ + +
Sbjct: 609 RESLRSYAATPWPLEPQHYLSFTEFEITFRPDSGDGVLLYSYDTSSK--DFLSIIMAAGH 666
Query: 146 VDFTFDLGTGAATLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXX 205
V+F FD G+G LRS + ++LG+WH LR++RT ++ LQVD+ + ++ G FTQ
Sbjct: 667 VEFRFDCGSGTGVLRSEDTLTLGQWHDLRVSRTAKNGILQVDKQKVVEGMAEGGFTQIKC 726
Query: 206 XXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNCAHPCIT 265
GGVP+Y+ V I F G IQK+++N+ +++ + GVNV N AHPC+
Sbjct: 727 NTDIFIGGVPNYDDVKKNSGILHPFSGSIQKIILNDRTIHVRHDFTSGVNVENAAHPCVG 786
Query: 266 QPCG-SGSCVPLYDGYKCVCTQ-----SCKESHLTEVMCASFDHGASFLHYLDPEIIHSS 319
PC GSC P +GY+C C +C+++ +TE + G S+L Y +P I+
Sbjct: 787 APCAHGGSCRPRKEGYECDCPLGFEGLNCQKA-ITEAIEIPQFIGRSYLTYDNPNILK-- 843
Query: 320 GLLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSK---DFLALGIHNGYAH 376
R++G N MR KT++ GL+LW G S + DF++LG+ +G A
Sbjct: 844 -------------RVSGSRSNAFMRFKTTAKDGLLLWRGDSPMRPNSDFISLGLRDG-AL 889
Query: 377 VMYXXXXXXXXXXXXQTKINNGVWHRLTVHRNFMV--VMHGSSHTRSNKSSKIEFKCLSI 434
V ++G WHR+ R+ + R+ KS + + L+I
Sbjct: 890 VFSYNLGSGVASIMVNGSFSDGRWHRVKAVRDGQSGKITVDDYGARTGKSPGM-MRQLNI 948
Query: 435 Q-RLHRTG-KQCLIRIDTDYSMQSISG--GKFEQLNTDSGLYVGGVED 478
L+ G K+ +R + Y M+ + G F L+TD ++ VED
Sbjct: 949 NGALYVGGMKEIALRTNRQY-MRGLVGCISHFT-LSTD--YHISLVED 992
Score = 356 (130.4 bits), Expect = 1.6e-37, Sum P(2) = 1.6e-37
Identities = 102/370 (27%), Positives = 161/370 (43%)
Query: 47 CNKTPCEHGGKCITTP--GSSYCLCPLGFTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQY 104
C++T C C+ G S C C LG G+ C + +Q PQF G SY+ ++ L Y
Sbjct: 343 CDETLCSADSFCVNDYAWGGSRCHCNLGKGGEACSEDIFIQYPQFFGHSYVTFEPLKNSY 402
Query: 105 LSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSNP 164
+ +T+ F+A +G+LLY G G GDF++L L R + F F+ GTG A + S
Sbjct: 403 QAF-QITLEFRAEAEDGLLLYCGESEHGRGDFMSLALIRRSLHFRFNCGTGMAIIISETK 461
Query: 165 ISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSPKV 224
I LG WH + L R G + LQ++ S G +++ GG P +
Sbjct: 462 IKLGAWHSVTLYRDGLNGLLQLNNGTPVTGQSQGQYSKITFRTPLYLGGAPSAYWLVRAT 521
Query: 225 KIKSSFIGCIQKVLINNHELNI----LGEAIQGVNVVNCAHP-CITQPC-GSGSCVPLY- 277
F GC+Q + +N ++++ LG+A+ G +V C+ C C G+C +
Sbjct: 522 GTNRGFQGCVQSLAVNGKKIDMRPWPLGKALNGADVGECSSGICDEASCINGGTCAAIKA 581
Query: 278 DGYKCVCTQSCKESHLTEVMCASFDHGASFLHYLDPEIIHSSGLLHYKFQLHVDFRITGY 337
D Y C+C + H + + F E + S + + T
Sbjct: 582 DSYICLCPLGFRGRHCEDAFTLTIPQ---FR-----ESLRSYAATPWPLEPQHYLSFT-- 631
Query: 338 EFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINN 397
EF I R S G++L++ + SKDFL++ + G+ + T +
Sbjct: 632 EFEITFR--PDSGDGVLLYSYDTSSKDFLSIIMAAGHVEFRFDCGSGTGVLRSEDT-LTL 688
Query: 398 GVWHRLTVHR 407
G WH L V R
Sbjct: 689 GQWHDLRVSR 698
Score = 267 (99.0 bits), Expect = 3.2e-22, Sum P(2) = 3.2e-22
Identities = 65/220 (29%), Positives = 107/220 (48%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLD--LQVPQFNGSSYLRYQG---LG 101
C PC HGG C C CPLGF G CQ + +++PQF G SYL Y L
Sbjct: 784 CVGAPCAHGGSCRPRKEGYECDCPLGFEGLNCQKAITEAIEIPQFIGRSYLTYDNPNILK 843
Query: 102 EQYLSLLDLTIVFKAIEPNGILLYNGHRADGVG-DFIALYLNDRYVDFTFDLGTGAATLR 160
S + + FK +G+LL+ G DFI+L L D + F+++LG+G A++
Sbjct: 844 RVSGSRSNAFMRFKTTAKDGLLLWRGDSPMRPNSDFISLGLRDGALVFSYNLGSGVASIM 903
Query: 161 SSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIV 220
+ S G WH+++ R G+ + VD + + SPG Q GG+ + +
Sbjct: 904 VNGSFSDGRWHRVKAVRDGQSGKITVDDYGARTGKSPGMMRQLNINGALYVGGMKEIALR 963
Query: 221 SPKVKIKSSFIGCIQK-VLINNHELNILGEAIQGVNVVNC 259
+ + ++ +GCI L ++ ++++ +A+ G N+ C
Sbjct: 964 TNRQYMRG-LVGCISHFTLSTDYHISLVEDAVDGKNINTC 1002
Score = 113 (44.8 bits), Expect = 1.6e-37, Sum P(2) = 1.6e-37
Identities = 30/85 (35%), Positives = 42/85 (49%)
Query: 439 RTGKQCLIRIDTDYSMQS-ISGGKFEQLNTDSGLYVGGVEDIEELTRSKYHHSFKGWISN 497
R G+ I +D DY ++ S G QLN + LYVGG+++I T +Y G IS+
Sbjct: 920 RDGQSGKITVD-DYGARTGKSPGMMRQLNINGALYVGGMKEIALRTNRQYMRGLVGCISH 978
Query: 498 LILSNDYQVKLPLSRSQGSSCQLTC 522
LS DY + L G + TC
Sbjct: 979 FTLSTDYHISLVEDAVDGKNIN-TC 1002
Score = 96 (38.9 bits), Expect = 9.5e-36, Sum P(2) = 9.5e-36
Identities = 20/69 (28%), Positives = 41/69 (59%)
Query: 436 RLHRTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVEDIEELTR-SKYHHSFKGW 494
R+ RT K ++++D ++ ++ G F Q+ ++ +++GGV + +++ + S H F G
Sbjct: 695 RVSRTAKNGILQVDKQKVVEGMAEGGFTQIKCNTDIFIGGVPNYDDVKKNSGILHPFSGS 754
Query: 495 ISNLILSND 503
I +IL ND
Sbjct: 755 IQKIIL-ND 762
Score = 87 (35.7 bits), Expect = 6.2e-07, Sum P(2) = 6.2e-07
Identities = 25/100 (25%), Positives = 47/100 (47%)
Query: 339 FNIDMRIKTSSSSGLILWTGSSQSK--DFLALGIHNGYAHVMYXXXXXXXXXXXXQTKIN 396
F I + + + GL+L+ G S+ DF++L + H + +TKI
Sbjct: 405 FQITLEFRAEAEDGLLLYCGESEHGRGDFMSLALIRRSLHFRFNCGTGMAIIIS-ETKIK 463
Query: 397 NGVWHRLTVHRN----FMVVMHGSSHTRSNKS--SKIEFK 430
G WH +T++R+ + + +G+ T ++ SKI F+
Sbjct: 464 LGAWHSVTLYRDGLNGLLQLNNGTPVTGQSQGQYSKITFR 503
Score = 71 (30.1 bits), Expect = 1.8e-55, Sum P(2) = 1.8e-55
Identities = 15/56 (26%), Positives = 31/56 (55%)
Query: 1 MVKSDNQVILDDWNTVRVFRHRWDAWIQLNDGNKIKGRSKECLEDKCNKTPCEHGG 56
++ S+ ++ L W++V ++R + +QLN+G + G+S+ +TP GG
Sbjct: 455 IIISETKIKLGAWHSVTLYRDGLNGLLQLNNGTPVTGQSQGQYSKITFRTPLYLGG 510
>UNIPROTKB|F1LQ53 [details] [associations]
symbol:Agrn "Agrin" species:10116 "Rattus norvegicus"
[GO:0005605 "basal lamina" evidence=IEA] [GO:0007213 "G-protein
coupled acetylcholine receptor signaling pathway" evidence=IEA]
[GO:0043113 "receptor clustering" evidence=IEA] [GO:0043236
"laminin binding" evidence=IEA] InterPro:IPR000742
InterPro:IPR002350 InterPro:IPR004850 Pfam:PF00008 Pfam:PF00050
Pfam:PF03146 PROSITE:PS50026 PROSITE:PS51121 SMART:SM00181
SMART:SM00280 RGD:2067 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0005605 GO:GO:0043113 GO:GO:0007213
PROSITE:PS01186 InterPro:IPR003645 InterPro:IPR001791
InterPro:IPR008993 Pfam:PF00054 SMART:SM00274 SMART:SM00282
SUPFAM:SSF50242 PROSITE:PS50025 IPI:IPI00554123
Ensembl:ENSRNOT00000027404 ArrayExpress:F1LQ53 Uniprot:F1LQ53
Length = 963
Score = 494 (179.0 bits), Expect = 2.5e-54, Sum P(3) = 2.5e-54
Identities = 131/392 (33%), Positives = 195/392 (49%)
Query: 42 CLEDK--CNKTPCEHGGKC-ITTPGSSYCLCPLGFTGDLCQTRLDLQ-----VPQFNGSS 93
C ++K C PC C + + G + C CPLG +G CQT L+ + FNG S
Sbjct: 503 CADEKSPCQPNPCHGAAPCRVLSSGGAKCECPLGRSGTFCQTVLETAGSRPFLADFNGFS 562
Query: 94 YLRYQGLG--EQYLS-LLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTF 150
YL +GL E+ L + L +VF A P+G+LLYNG + DG GDF++L L++R+++F +
Sbjct: 563 YLELKGLHTFERDLGEKMALEMVFLARGPSGLLLYNGQKTDGKGDFVSLALHNRHLEFCY 622
Query: 151 DLGTGAATLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXX 210
DLG GAA +RS PI+LG W ++ L R GR LQV P SP P T
Sbjct: 623 DLGKGAAVIRSKEPIALGTWVRVFLERNGRKGALQVGDGPRVLGESPVPHTMLNLKEPLY 682
Query: 211 XGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNCA-HPC---ITQ 266
GG PD++ ++ + S F G IQ V + H+L ++ V+V A HPC +
Sbjct: 683 IGGAPDFSKLARGAAVSSGFNGVIQLVSLRGHQLLTQEHVLRAVDVSPFADHPCTQALGN 742
Query: 267 PC-GSGSCVPLYDGYKCVCTQS-----CK----ESHLTEVMCASFDHGASFLHYLDPEII 316
PC GSCVP Y+C+C C+ E + ++ +FD G +++ YL+ +I
Sbjct: 743 PCLNGGSCVPREATYECLCPGGFSGLHCEKGLVEKSVGDLETLAFD-GRTYIEYLNA-VI 800
Query: 317 HSSGLLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSK-DFLALGIHNGYA 375
S L H F + +R T ++ GL+LW G + + D++AL I +G+
Sbjct: 801 ESEKALQSN---H---------FELSLR--TEATQGLVLWIGKAAERADYMALAIVDGHL 846
Query: 376 HVMYXXXXXXXXXXXXQTKINNGVWHRLTVHR 407
+ Y K+N W R+ HR
Sbjct: 847 QLSYDLGSQPVVLRST-VKVNTNRWLRIRAHR 877
Score = 329 (120.9 bits), Expect = 5.0e-28, Sum P(2) = 5.0e-28
Identities = 91/270 (33%), Positives = 124/270 (45%)
Query: 28 QLNDGNKIKG-RSKECL--EDKCNKTPCEHGGKCITTP-GSSY-CLCPLGFTGDLCQTRL 82
Q N +I+ R C C+ PC HGG C G + C C G G +C+
Sbjct: 229 QCNQQRRIRLLRQGPCAPPSKSCDSQPCLHGGTCQDQDSGKGFTCSCTAGRGGSVCEKVQ 288
Query: 83 DLQVPQFNGSSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLN 142
+P F G S+L + L + L L + F+A+E G+LLYNG+ A G DF+AL L
Sbjct: 289 PPSMPAFKGHSFLAFPTLRAYHT--LRLALEFRALETEGLLLYNGN-ARGK-DFLALALL 344
Query: 143 DRYVDFTFDLGTGAATLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQ 202
D V F FD G+G A L S P+ G WH+L L+R R L VD SP
Sbjct: 345 DGRVQFRFDTGSGPAVLTSLVPVEPGRWHRLELSRHWRQGTLSVDGETPVVGESPSGTDG 404
Query: 203 XXXXXXXXXGGVPDYNI--VSPKVKIKSSFIGCIQKVLINNHELNILG---EAIQGVNVV 257
GG+P+ + V + + GCI+ + INN +L + A+Q V
Sbjct: 405 LNLDTNLYVGGIPEEQVAMVLDRTSVGVGLKGCIRMLDINNQQLELSDWQRAAVQSSGVG 464
Query: 258 NCA-HPCITQPCGSGS-CVPLYDG-YKCVC 284
C HPC+ PC G+ C L G + C C
Sbjct: 465 ECGDHPCLPNPCHGGALCQALEAGMFLCQC 494
Score = 225 (84.3 bits), Expect = 3.7e-15, Sum P(2) = 3.7e-15
Identities = 60/223 (26%), Positives = 104/223 (46%)
Query: 51 PCEHGGKCITTPGSSYCLCPLGFTGDLCQTRL------DLQVPQFNGSSYLRYQGL---G 101
PC +GG C+ + CLCP GF+G C+ L DL+ F+G +Y+ Y
Sbjct: 743 PCLNGGSCVPREATYECLCPGGFSGLHCEKGLVEKSVGDLETLAFDGRTYIEYLNAVIES 802
Query: 102 EQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRS 161
E+ L + + G++L+ G A+ D++AL + D ++ ++DLG+ LRS
Sbjct: 803 EKALQSNHFELSLRTEATQGLVLWIGKAAERA-DYMALAIVDGHLQLSYDLGSQPVVLRS 861
Query: 162 SNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNI-- 219
+ ++ W ++R R R LQV SP TQ GG+ +
Sbjct: 862 TVKVNTNRWLRIRAHREHREGSLQVGNEAPVTGSSPLGATQLDTDGALWLGGLQKLPVGQ 921
Query: 220 VSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNCAHP 262
PK + F+GC++ V++ + +L++L +A+ + C P
Sbjct: 922 ALPKA-YGTGFVGCLRDVVVGHRQLHLLEDAVTKPELRPCPTP 963
Score = 67 (28.6 bits), Expect = 2.5e-54, Sum P(3) = 2.5e-54
Identities = 17/56 (30%), Positives = 23/56 (41%)
Query: 27 IQLNDGNKIKGRSK---ECLEDKCNKTPCEHGGKC-ITTPGSSYCLCPLGFTGDLC 78
++L+D + +S EC + C PC G C G C CP G G C
Sbjct: 448 LELSDWQRAAVQSSGVGECGDHPCLPNPCHGGALCQALEAGMFLCQCPPGRFGPTC 503
Score = 56 (24.8 bits), Expect = 2.5e-54, Sum P(3) = 2.5e-54
Identities = 14/69 (20%), Positives = 34/69 (49%)
Query: 436 RLHRTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVEDIE--ELTRSKYHHSFKG 493
R HR ++ +++ + + S QL+TD L++GG++ + + Y F G
Sbjct: 874 RAHREHREGSLQVGNEAPVTGSSPLGATQLDTDGALWLGGLQKLPVGQALPKAYGTGFVG 933
Query: 494 WISNLILSN 502
+ ++++ +
Sbjct: 934 CLRDVVVGH 942
Score = 54 (24.1 bits), Expect = 8.1e-28, Sum P(2) = 8.1e-28
Identities = 19/71 (26%), Positives = 30/71 (42%)
Query: 437 LHRTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVEDIEELTRSKYHHS-FKGWI 495
L R G++ +++ + S LN LY+GG D +L R S F G I
Sbjct: 647 LERNGRKGALQVGDGPRVLGESPVPHTMLNLKEPLYIGGAPDFSKLARGAAVSSGFNGVI 706
Query: 496 SNLILSNDYQV 506
L+ +Q+
Sbjct: 707 Q-LVSLRGHQL 716
Score = 48 (22.0 bits), Expect = 3.7e-15, Sum P(2) = 3.7e-15
Identities = 13/41 (31%), Positives = 22/41 (53%)
Query: 1 MVKSDNQVILDDWNTVRVF--RHRWDAWIQLNDGNKIKGRS 39
+++S + L W VRVF R+ +Q+ DG ++ G S
Sbjct: 630 VIRSKEPIALGTW--VRVFLERNGRKGALQVGDGPRVLGES 668
Score = 45 (20.9 bits), Expect = 7.0e-27, Sum P(2) = 7.0e-27
Identities = 20/79 (25%), Positives = 33/79 (41%)
Query: 441 GKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVEDIEELTRS--KYHHSFKGWISN- 497
G C+ R + Y + + G F L+ + GL V D+E L Y I +
Sbjct: 747 GGSCVPR-EATY--ECLCPGGFSGLHCEKGLVEKSVGDLETLAFDGRTYIEYLNAVIESE 803
Query: 498 -LILSNDYQVKLPLSRSQG 515
+ SN +++ L +QG
Sbjct: 804 KALQSNHFELSLRTEATQG 822
>RGD|2067 [details] [associations]
symbol:Agrn "agrin" species:10116 "Rattus norvegicus" [GO:0001932
"regulation of protein phosphorylation" evidence=IDA] [GO:0001934
"positive regulation of protein phosphorylation" evidence=ISO]
[GO:0002162 "dystroglycan binding" evidence=IDA] [GO:0005509 "calcium
ion binding" evidence=ISS;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005578 "proteinaceous extracellular matrix"
evidence=TAS] [GO:0005604 "basement membrane" evidence=ISO;IDA]
[GO:0005605 "basal lamina" evidence=ISO;ISS] [GO:0005615
"extracellular space" evidence=ISO] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0007009 "plasma membrane organization"
evidence=ISO] [GO:0007268 "synaptic transmission" evidence=ISO;IMP]
[GO:0007416 "synapse assembly" evidence=IMP] [GO:0007528
"neuromuscular junction development" evidence=ISO;TAS] [GO:0008582
"regulation of synaptic growth at neuromuscular junction"
evidence=ISO] [GO:0009986 "cell surface" evidence=ISO] [GO:0010469
"regulation of receptor activity" evidence=ISO] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030548 "acetylcholine receptor regulator activity" evidence=ISO]
[GO:0031012 "extracellular matrix" evidence=ISO] [GO:0032314
"regulation of Rac GTPase activity" evidence=ISO] [GO:0032321
"positive regulation of Rho GTPase activity" evidence=IDA]
[GO:0033691 "sialic acid binding" evidence=ISS] [GO:0035374
"chondroitin sulfate binding" evidence=ISS] [GO:0043113 "receptor
clustering" evidence=ISO;ISS;IDA] [GO:0043395 "heparan sulfate
proteoglycan binding" evidence=ISS] [GO:0043525 "positive regulation
of neuron apoptotic process" evidence=ISO] [GO:0045202 "synapse"
evidence=ISO;IDA] [GO:0045213 "neurotransmitter receptor metabolic
process" evidence=ISO] [GO:0045887 "positive regulation of synaptic
growth at neuromuscular junction" evidence=ISO;ISS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO;IDA] [GO:0051491 "positive regulation of
filopodium assembly" evidence=IDA] [GO:2000541 "positive regulation
of protein geranylgeranylation" evidence=ISO] InterPro:IPR000742
InterPro:IPR002350 Pfam:PF00008 Pfam:PF00050 Pfam:PF07648
PROSITE:PS50026 PROSITE:PS51465 SMART:SM00181 SMART:SM00280 RGD:2067
GO:GO:0005615 GO:GO:0009986 GO:GO:0043525 GO:GO:0007528 GO:GO:0045887
GO:GO:0045944 GO:GO:0007009 GO:GO:0045202 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0007416
GO:GO:0005605 GO:GO:0043113 PROSITE:PS01186 GO:GO:0033691
GO:GO:0002162 CTD:375790 eggNOG:NOG312635 HOGENOM:HOG000033860
HOVERGEN:HBG080471 KO:K06254 GO:GO:0030548 GO:GO:0035374
GO:GO:0043395 GO:GO:0051491 GO:GO:2000541 GO:GO:0032321 GO:GO:0032314
InterPro:IPR002049 InterPro:IPR003645 InterPro:IPR001791
InterPro:IPR000082 Pfam:PF00053 Pfam:PF00054 Pfam:PF01390
SMART:SM00180 SMART:SM00274 SMART:SM00282 SMART:SM00200
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 PROSITE:PS50024
GO:GO:0045213 GO:GO:0001934 InterPro:IPR011497 EMBL:M64780
EMBL:S44194 IPI:IPI00188885 IPI:IPI00231249 IPI:IPI00231250
IPI:IPI00231251 IPI:IPI00231252 PIR:JH0399 RefSeq:NP_786930.1
UniGene:Rn.2163 PDB:3V64 PDB:3V65 PDBsum:3V64 PDBsum:3V65
ProteinModelPortal:P25304 SMR:P25304 IntAct:P25304 STRING:P25304
PRIDE:P25304 GeneID:25592 KEGG:rno:25592 InParanoid:P25304
NextBio:607271 ArrayExpress:P25304 Genevestigator:P25304
GermOnline:ENSRNOG00000020205 GO:GO:0001932 Uniprot:P25304
Length = 1959
Score = 416 (151.5 bits), Expect = 1.7e-51, Sum P(3) = 1.7e-51
Identities = 100/263 (38%), Positives = 140/263 (53%)
Query: 42 CLEDK--CNKTPCEHGGKC-ITTPGSSYCLCPLGFTGDLCQTRLDLQ-----VPQFNGSS 93
C ++K C PC C + + G + C CPLG +G CQT L+ + FNG S
Sbjct: 1476 CADEKSPCQPNPCHGAAPCRVLSSGGAKCECPLGRSGTFCQTVLETAGSRPFLADFNGFS 1535
Query: 94 YLRYQGLG--EQYLS-LLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTF 150
YL +GL E+ L + L +VF A P+G+LLYNG + DG GDF++L L++R+++F +
Sbjct: 1536 YLELKGLHTFERDLGEKMALEMVFLARGPSGLLLYNGQKTDGKGDFVSLALHNRHLEFCY 1595
Query: 151 DLGTGAATLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPG----PFTQXXXX 206
DLG GAA +RS PI+LG W ++ L R GR LQV P SP P T
Sbjct: 1596 DLGKGAAVIRSKEPIALGTWVRVFLERNGRKGALQVGDGPRVLGESPKSRKVPHTMLNLK 1655
Query: 207 XXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNCA-HPC-- 263
GG PD++ ++ + S F G IQ V + H+L ++ V+V A HPC
Sbjct: 1656 EPLYIGGAPDFSKLARGAAVSSGFSGVIQLVSLRGHQLLTQEHVLRAVDVSPFADHPCTQ 1715
Query: 264 -ITQPC-GSGSCVPLYDGYKCVC 284
+ PC GSCVP Y+C+C
Sbjct: 1716 ALGNPCLNGGSCVPREATYECLC 1738
Score = 328 (120.5 bits), Expect = 2.8e-39, Sum P(4) = 2.8e-39
Identities = 86/248 (34%), Positives = 117/248 (47%)
Query: 47 CNKTPCEHGGKCITTP-GSSY-CLCPLGFTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQY 104
C+ PC HGG C G + C C G G +C+ +P F G S+L + L +
Sbjct: 1224 CDSQPCLHGGTCQDQDSGKGFTCSCTAGRGGSVCEKVQPPSMPAFKGHSFLAFPTLRAYH 1283
Query: 105 LSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSNP 164
L L + F+A+E G+LLYNG+ A G DF+AL L D V F FD G+G A L S P
Sbjct: 1284 T--LRLALEFRALETEGLLLYNGN-ARGK-DFLALALLDGRVQFRFDTGSGPAVLTSLVP 1339
Query: 165 ISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNI--VSP 222
+ G WH+L L+R R L VD SP GG+P+ + V
Sbjct: 1340 VEPGRWHRLELSRHWRQGTLSVDGETPVVGESPSGTDGLNLDTNLYVGGIPEEQVAMVLD 1399
Query: 223 KVKIKSSFIGCIQKVLINNHELNILG---EAIQGVNVVNCA-HPCITQPCGSGS-CVPLY 277
+ + GCI+ + INN +L + A+Q V C HPC+ PC G+ C L
Sbjct: 1400 RTSVGVGLKGCIRMLDINNQQLELSDWQRAAVQSSGVGECGDHPCLPNPCHGGALCQALE 1459
Query: 278 DG-YKCVC 284
G + C C
Sbjct: 1460 AGMFLCQC 1467
Score = 144 (55.7 bits), Expect = 5.3e-11, Sum P(3) = 5.3e-11
Identities = 38/144 (26%), Positives = 70/144 (48%)
Query: 121 GILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSNPISLGEWHKLRLTRTGR 180
G++L+ G A+ D++AL + D ++ ++DLG+ LRS+ ++ W ++R R R
Sbjct: 1818 GLVLWIGKAAERA-DYMALAIVDGHLQLSYDLGSQPVVLRSTVKVNTNRWLRIRAHREHR 1876
Query: 181 HAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNI--VSPKVKIKSSFIGCIQKVL 238
LQV SP TQ GG+ + PK + F+GC++ V+
Sbjct: 1877 EGSLQVGNEAPVTGSSPLGATQLDTDGALWLGGLQKLPVGQALPKA-YGTGFVGCLRDVV 1935
Query: 239 INNHELNILGEAIQGVNVVNCAHP 262
+ + +L++L +A+ + C P
Sbjct: 1936 VGHRQLHLLEDAVTKPELRPCPTP 1959
Score = 137 (53.3 bits), Expect = 1.7e-51, Sum P(3) = 1.7e-51
Identities = 43/166 (25%), Positives = 74/166 (44%)
Query: 261 HPC---ITQPC-GSGSCVPLYDGYKCVCTQS-----CK----ESHLTEVMCASFDHGASF 307
HPC + PC GSCVP Y+C+C C+ E + ++ +FD G ++
Sbjct: 1711 HPCTQALGNPCLNGGSCVPREATYECLCPGGFSGLHCEKGLVEKSVGDLETLAFD-GRTY 1769
Query: 308 LHYLDPEIIHSSGLLHYKFQLHVDFRITGYEF-----NIDMRIKTSSSSGLILWTGSSQS 362
+ YL+ +I S +D R E + ++ ++T ++ GL+LW G +
Sbjct: 1770 IEYLNA-VIESELTNEIPAPETLDSRALFSEKALQSNHFELSLRTEATQGLVLWIGKAAE 1828
Query: 363 K-DFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGVWHRLTVHR 407
+ D++AL I +G+ + Y K+N W R+ HR
Sbjct: 1829 RADYMALAIVDGHLQLSYDLGSQPVVLRST-VKVNTNRWLRIRAHR 1873
Score = 99 (39.9 bits), Expect = 5.3e-11, Sum P(3) = 5.3e-11
Identities = 20/53 (37%), Positives = 29/53 (54%)
Query: 51 PCEHGGKCITTPGSSYCLCPLGFTGDLCQTRL------DLQVPQFNGSSYLRY 97
PC +GG C+ + CLCP GF+G C+ L DL+ F+G +Y+ Y
Sbjct: 1720 PCLNGGSCVPREATYECLCPGGFSGLHCEKGLVEKSVGDLETLAFDGRTYIEY 1772
Score = 92 (37.4 bits), Expect = 1.2e-34, Sum P(4) = 1.2e-34
Identities = 38/152 (25%), Positives = 61/152 (40%)
Query: 262 PCITQPC-GSGSCVPLYDG-YKCVCTQSCKESHLTEVMCASFDHGASFLHYLDPEIIHSS 319
PC PC G+ C L G KC C + V+ + G+ P + +
Sbjct: 1482 PCQPNPCHGAAPCRVLSSGGAKCECPLGRSGTFCQTVLETA---GSR------PFLADFN 1532
Query: 320 GLLHYKFQ-LHVDFRITGYEFNIDMRIKTSSSSGLILWTGS-SQSK-DFLALGIHNGYAH 376
G + + + LH R G + ++M SGL+L+ G + K DF++L +HN +
Sbjct: 1533 GFSYLELKGLHTFERDLGEKMALEMVFLARGPSGLLLYNGQKTDGKGDFVSLALHNRHLE 1592
Query: 377 VMYXXXXXXXXXXXXQTKINNGVWHRLTVHRN 408
Y + I G W R+ + RN
Sbjct: 1593 FCYDLGKGAAVIRSKEP-IALGTWVRVFLERN 1623
Score = 85 (35.0 bits), Expect = 0.00015, Sum P(4) = 0.00015
Identities = 17/73 (23%), Positives = 34/73 (46%)
Query: 337 YEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTKIN 396
+ + + + + GL+L+ G+++ KDFLAL + +G + +
Sbjct: 1283 HTLRLALEFRALETEGLLLYNGNARGKDFLALALLDGRVQFRFDTGSGPAVLTSL-VPVE 1341
Query: 397 NGVWHRLTVHRNF 409
G WHRL + R++
Sbjct: 1342 PGRWHRLELSRHW 1354
Score = 67 (28.6 bits), Expect = 7.8e-08, Sum P(3) = 7.8e-08
Identities = 17/56 (30%), Positives = 23/56 (41%)
Query: 27 IQLNDGNKIKGRSK---ECLEDKCNKTPCEHGGKC-ITTPGSSYCLCPLGFTGDLC 78
++L+D + +S EC + C PC G C G C CP G G C
Sbjct: 1421 LELSDWQRAAVQSSGVGECGDHPCLPNPCHGGALCQALEAGMFLCQCPPGRFGPTC 1476
Score = 65 (27.9 bits), Expect = 0.00015, Sum P(4) = 0.00015
Identities = 25/86 (29%), Positives = 41/86 (47%)
Query: 437 LHRTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVEDIEE---LTRSKYHHSFKG 493
L R +Q + +D + + S + LN D+ LYVGG+ + + L R+ KG
Sbjct: 1350 LSRHWRQGTLSVDGETPVVGESPSGTDGLNLDTNLYVGGIPEEQVAMVLDRTSVGVGLKG 1409
Query: 494 WISNLILSNDYQVKLPLSRSQGSSCQ 519
I L ++N +L LS Q ++ Q
Sbjct: 1410 CIRMLDINNQ---QLELSDWQRAAVQ 1432
Score = 63 (27.2 bits), Expect = 2.8e-39, Sum P(4) = 2.8e-39
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCP 70
C + CE G C+ G + C+CP
Sbjct: 796 CVEIHCEFGASCVEKAGFAQCICP 819
Score = 62 (26.9 bits), Expect = 0.00015, Sum P(4) = 0.00015
Identities = 17/45 (37%), Positives = 21/45 (46%)
Query: 262 PCITQPCGS---GSCVPLYDGYKCVCTQSCKESHLTEVMCASFDH 303
PC PCG GS + G +CVC C ES + +C S H
Sbjct: 428 PC--DPCGQCRFGSLCEVETG-RCVCPSECVES--AQPVCGSDGH 467
Score = 60 (26.2 bits), Expect = 5.7e-39, Sum P(4) = 5.7e-39
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 36 KGRSKEC-LEDKCNKTPCEHGGKCITTPGSSYCLC 69
K RS +C D+C +T C+ C++ G +C C
Sbjct: 278 KVRSGQCQTRDQCPET-CQFNSVCLSRRGRPHCSC 311
Score = 56 (24.8 bits), Expect = 1.7e-51, Sum P(3) = 1.7e-51
Identities = 14/69 (20%), Positives = 34/69 (49%)
Query: 436 RLHRTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVEDIE--ELTRSKYHHSFKG 493
R HR ++ +++ + + S QL+TD L++GG++ + + Y F G
Sbjct: 1870 RAHREHREGSLQVGNEAPVTGSSPLGATQLDTDGALWLGGLQKLPVGQALPKAYGTGFVG 1929
Query: 494 WISNLILSN 502
+ ++++ +
Sbjct: 1930 CLRDVVVGH 1938
Score = 56 (24.8 bits), Expect = 1.5e-38, Sum P(4) = 1.5e-38
Identities = 15/47 (31%), Positives = 21/47 (44%)
Query: 28 QLNDGNKIKG-RSKEC-LEDKCNKTPCEHGGKCI-TTPG-SSYCLCP 70
Q N +I+ R C D C C G C+ + G ++ CLCP
Sbjct: 122 QCNQQRRIRLLRQGPCGSRDPCANVTCSFGSTCVPSADGQTASCLCP 168
Score = 49 (22.3 bits), Expect = 6.3e-34, Sum P(4) = 6.3e-34
Identities = 15/43 (34%), Positives = 20/43 (46%)
Query: 465 LNTDSGLYVGGVEDIEELTRSKYHHS-FKGWISNLILSNDYQV 506
LN LY+GG D +L R S F G I L+ +Q+
Sbjct: 1652 LNLKEPLYIGGAPDFSKLARGAAVSSGFSGVIQ-LVSLRGHQL 1693
Score = 48 (22.0 bits), Expect = 5.3e-11, Sum P(3) = 5.3e-11
Identities = 13/41 (31%), Positives = 22/41 (53%)
Query: 1 MVKSDNQVILDDWNTVRVF--RHRWDAWIQLNDGNKIKGRS 39
+++S + L W VRVF R+ +Q+ DG ++ G S
Sbjct: 1603 VIRSKEPIALGTW--VRVFLERNGRKGALQVGDGPRVLGES 1641
Score = 43 (20.2 bits), Expect = 3.2e-37, Sum P(4) = 3.2e-37
Identities = 7/23 (30%), Positives = 9/23 (39%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLC 69
C+ C G C G + C C
Sbjct: 363 CHGVQCAFGAVCTVKNGKAECEC 385
Score = 41 (19.5 bits), Expect = 2.5e-38, Sum P(2) = 2.5e-38
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 441 GKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVEDIEEL 482
G C+ R + Y + + G F L+ + GL V D+E L
Sbjct: 1724 GGSCVPR-EATY--ECLCPGGFSGLHCEKGLVEKSVGDLETL 1762
Score = 37 (18.1 bits), Expect = 1.2e-06, Sum P(4) = 1.2e-06
Identities = 7/12 (58%), Positives = 7/12 (58%)
Query: 260 AHPCITQPCGSG 271
A PC CGSG
Sbjct: 556 AGPCEPAECGSG 567
>UNIPROTKB|I3LEG7 [details] [associations]
symbol:EGFLAM "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030198 "extracellular matrix organization"
evidence=IEA] [GO:0019800 "peptide cross-linking via chondroitin
4-sulfate glycosaminoglycan" evidence=IEA] [GO:0010811 "positive
regulation of cell-substrate adhesion" evidence=IEA] [GO:0005614
"interstitial matrix" evidence=IEA] [GO:0005604 "basement membrane"
evidence=IEA] [GO:0005539 "glycosaminoglycan binding" evidence=IEA]
InterPro:IPR000742 InterPro:IPR003961 Pfam:PF00008 Pfam:PF00041
PROSITE:PS50026 PROSITE:PS50853 SMART:SM00060 SMART:SM00181
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265 GO:GO:0030198
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 GO:GO:0010811 InterPro:IPR001791 Pfam:PF00054
SMART:SM00282 PROSITE:PS50025 GeneTree:ENSGT00530000063501
GO:GO:0005604 GO:GO:0005614 Pfam:PF02210 OMA:FMRFKTT GO:GO:0005539
GO:GO:0019800 EMBL:CU570705 EMBL:CU633366 EMBL:CU914192
Ensembl:ENSSSCT00000025413 Uniprot:I3LEG7
Length = 1020
Score = 405 (147.6 bits), Expect = 3.2e-51, Sum P(3) = 3.2e-51
Identities = 111/392 (28%), Positives = 183/392 (46%)
Query: 32 GNKIKGRSK-ECLEDKCNKTPCEHGGKCITTPGSSY-CLCPLGFTGDLCQTRLDLQVPQF 89
G + G EC C++ C +GG C + +Y CLCPLGF G C+ L +PQF
Sbjct: 554 GKALSGADVGECSSGICDEASCINGGTCTASKADTYICLCPLGFRGRHCEDAFTLTIPQF 613
Query: 90 NGS--SYLRYQGLGE--QYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRY 145
S SY E YLS ++ + F+ +G+LLY+ G DF+++ + +
Sbjct: 614 RESLRSYAATPWPLEPRHYLSFMEFEMTFRPDSEDGVLLYSYDT--GSKDFLSITMAGGH 671
Query: 146 VDFTFDLGTGAATLRSSNPISLGEWHKLR-LTRTGRHAYLQVDRFPSSQILSPGPFTQXX 204
V+F FD G+G LRS I+LG+ H ++ +++T + L + + + Q+++ +
Sbjct: 672 VEFRFDCGSGTGVLRSQTAITLGKDHNIKKISQTAKSGLLLLI-WHNHQLVTESQ--KDG 728
Query: 205 XXXXXXXGGVPDYNIVSPKVKIKSS---FIGCIQ-KVLINNHELNILGEAIQGVNVVNCA 260
+P I+ + S F+ K+++N+ +++ + GVNV N A
Sbjct: 729 IFTFLSVNNIPYVEIILNHNTLPESTTVFLHIFSPKIILNDRTIHVKHDFTWGVNVENAA 788
Query: 261 HPCITQPCG-SGSCVPLYDGYKCVCTQSCKESHLTEVMCASFDHGASFLHYLDPEIIHSS 319
HPC+ PC GSC P +GY+C C + H + C ++ P+ I S
Sbjct: 789 HPCVGSPCAHGGSCRPRKEGYECDCPLGFEGLHCQKE-CGNYCLNTITEAIEIPQFIGRS 847
Query: 320 GLLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSK---DFLALGIHNGYAH 376
L Y + R++G N MR KT++ GL++W G S + DF++LG+ +G A
Sbjct: 848 -YLTYDNPAILK-RVSGSRSNAFMRFKTTAKDGLLMWRGDSPMRPNSDFISLGLRDG-AL 904
Query: 377 VMYXXXXXXXXXXXXQTKINNGVWHRLTVHRN 408
V N+G WHR+ R+
Sbjct: 905 VFSYNLGSGVASILVNGSFNDGRWHRVKAVRD 936
Score = 346 (126.9 bits), Expect = 6.6e-36, Sum P(2) = 6.6e-36
Identities = 100/366 (27%), Positives = 160/366 (43%)
Query: 47 CNKTPCEHGGKCIT--TPGSSYCLCPLGFTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQY 104
C++T C C+ T G S C C LG G+ C + +Q PQF G SY+ ++ L Y
Sbjct: 348 CDETLCSADSFCVNDYTWGGSRCHCNLGKGGESCSEDIVIQYPQFFGHSYVTFEPLKNSY 407
Query: 105 LSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSNP 164
+ +T+ F+A +G+LLY G G GDF+AL + R + F F+ GTG A + S
Sbjct: 408 QAF-QITLEFRAEAEDGLLLYCGENEHGRGDFMALAIIRRSLQFRFNCGTGVAIITSETK 466
Query: 165 ISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSPKV 224
I LG WH + L R G + LQ++ S G +++ GG P +
Sbjct: 467 IKLGAWHTVTLYRDGLNGLLQLNNGTPVTGQSQGQYSKITFRTPLYVGGAPSVYWLVRAT 526
Query: 225 KIKSSFIGCIQKVLINNHELNI----LGEAIQGVNVVNCAHP-CITQPC-GSGSCVPLY- 277
F GC+Q + +N +++ LG+A+ G +V C+ C C G+C
Sbjct: 527 GTNRGFQGCVQSLTVNGKRMDLRPWPLGKALSGADVGECSSGICDEASCINGGTCTASKA 586
Query: 278 DGYKCVCTQSCKESHLTEVMCASFDHGASFLHYLDPEIIHSSGLLHYKFQLHVDFRITGY 337
D Y C+C + H + + F E + S + L ++
Sbjct: 587 DTYICLCPLGFRGRHCEDAFTLTIPQ---FR-----ESLRSYAATPWP--LEPRHYLSFM 636
Query: 338 EFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINN 397
EF +M + S G++L++ + SKDFL++ + G+ + QT I
Sbjct: 637 EF--EMTFRPDSEDGVLLYSYDTGSKDFLSITMAGGHVEFRFDCGSGTGVLRS-QTAITL 693
Query: 398 GVWHRL 403
G H +
Sbjct: 694 GKDHNI 699
Score = 241 (89.9 bits), Expect = 6.8e-20, Sum P(2) = 6.8e-20
Identities = 63/228 (27%), Positives = 106/228 (46%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLD----------LQVPQFNGSSYLR 96
C +PC HGG C C CPLGF G CQ +++PQF G SYL
Sbjct: 791 CVGSPCAHGGSCRPRKEGYECDCPLGFEGLHCQKECGNYCLNTITEAIEIPQFIGRSYLT 850
Query: 97 YQG---LGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVG-DFIALYLNDRYVDFTFDL 152
Y L S + + FK +G+L++ G DFI+L L D + F+++L
Sbjct: 851 YDNPAILKRVSGSRSNAFMRFKTTAKDGLLMWRGDSPMRPNSDFISLGLRDGALVFSYNL 910
Query: 153 GTGAATLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXG 212
G+G A++ + + G WH+++ R G+ + VD + + SPG Q G
Sbjct: 911 GSGVASILVNGSFNDGRWHRVKAVRDGQSGKITVDDYGARTGKSPGMMRQLNINGALYVG 970
Query: 213 GVPDYNIVSPKVKIKSSFIGCIQK-VLINNHELNILGEAIQGVNVVNC 259
G+ + + + + ++ +GCI L ++ + ++ +A+ G N+ C
Sbjct: 971 GMKEIALHTNRQYMRG-LVGCISHFTLSTDYHIALVEDAVDGKNINTC 1017
Score = 111 (44.1 bits), Expect = 3.2e-51, Sum P(3) = 3.2e-51
Identities = 30/85 (35%), Positives = 42/85 (49%)
Query: 439 RTGKQCLIRIDTDYSMQS-ISGGKFEQLNTDSGLYVGGVEDIEELTRSKYHHSFKGWISN 497
R G+ I +D DY ++ S G QLN + LYVGG+++I T +Y G IS+
Sbjct: 935 RDGQSGKITVD-DYGARTGKSPGMMRQLNINGALYVGGMKEIALHTNRQYMRGLVGCISH 993
Query: 498 LILSNDYQVKLPLSRSQGSSCQLTC 522
LS DY + L G + TC
Sbjct: 994 FTLSTDYHIALVEDAVDGKNIN-TC 1017
Score = 82 (33.9 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 25/100 (25%), Positives = 46/100 (46%)
Query: 339 FNIDMRIKTSSSSGLILWTGSSQSK--DFLALGIHNGYAHVMYXXXXXXXXXXXXQTKIN 396
F I + + + GL+L+ G ++ DF+AL I + +TKI
Sbjct: 410 FQITLEFRAEAEDGLLLYCGENEHGRGDFMALAIIRRSLQFRFNCGTGVAIITS-ETKIK 468
Query: 397 NGVWHRLTVHRN----FMVVMHGSSHTRSNKS--SKIEFK 430
G WH +T++R+ + + +G+ T ++ SKI F+
Sbjct: 469 LGAWHTVTLYRDGLNGLLQLNNGTPVTGQSQGQYSKITFR 508
Score = 77 (32.2 bits), Expect = 3.2e-51, Sum P(3) = 3.2e-51
Identities = 16/56 (28%), Positives = 31/56 (55%)
Query: 1 MVKSDNQVILDDWNTVRVFRHRWDAWIQLNDGNKIKGRSKECLEDKCNKTPCEHGG 56
++ S+ ++ L W+TV ++R + +QLN+G + G+S+ +TP GG
Sbjct: 460 IITSETKIKLGAWHTVTLYRDGLNGLLQLNNGTPVTGQSQGQYSKITFRTPLYVGG 515
>MGI|MGI:87961 [details] [associations]
symbol:Agrn "agrin" species:10090 "Mus musculus" [GO:0001932
"regulation of protein phosphorylation" evidence=ISO] [GO:0001934
"positive regulation of protein phosphorylation" evidence=IDA]
[GO:0002162 "dystroglycan binding" evidence=ISO] [GO:0005509
"calcium ion binding" evidence=ISO] [GO:0005576 "extracellular
region" evidence=IEA] [GO:0005578 "proteinaceous extracellular
matrix" evidence=IEA] [GO:0005604 "basement membrane"
evidence=ISO;IDA] [GO:0005605 "basal lamina" evidence=ISO;IDA]
[GO:0005615 "extracellular space" evidence=IDA;TAS] [GO:0007009
"plasma membrane organization" evidence=IMP] [GO:0007268 "synaptic
transmission" evidence=ISO;IDA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0007416 "synapse
assembly" evidence=ISO] [GO:0007528 "neuromuscular junction
development" evidence=IGI] [GO:0008582 "regulation of synaptic
growth at neuromuscular junction" evidence=IMP] [GO:0009986 "cell
surface" evidence=IDA] [GO:0010469 "regulation of receptor
activity" evidence=IDA] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0030548 "acetylcholine receptor regulator
activity" evidence=IDA] [GO:0031012 "extracellular matrix"
evidence=ISO] [GO:0032314 "regulation of Rac GTPase activity"
evidence=IDA] [GO:0032321 "positive regulation of Rho GTPase
activity" evidence=ISO] [GO:0043113 "receptor clustering"
evidence=IGI;ISO;IMP;IDA] [GO:0043525 "positive regulation of
neuron apoptotic process" evidence=IMP] [GO:0045202 "synapse"
evidence=ISO;IDA] [GO:0045213 "neurotransmitter receptor metabolic
process" evidence=IDA] [GO:0045887 "positive regulation of synaptic
growth at neuromuscular junction" evidence=IMP] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO;IDA] [GO:0051491 "positive regulation of
filopodium assembly" evidence=ISO] [GO:2000541 "positive regulation
of protein geranylgeranylation" evidence=IMP] Reactome:REACT_112621
InterPro:IPR000742 InterPro:IPR002350 Pfam:PF00008 Pfam:PF00050
Pfam:PF07648 PROSITE:PS50026 PROSITE:PS51465 SMART:SM00181
SMART:SM00280 MGI:MGI:87961 GO:GO:0005615 GO:GO:0009986
GO:GO:0043525 GO:GO:0007528 GO:GO:0045887 GO:GO:0045944
GO:GO:0007009 GO:GO:0045202 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0007416 GO:GO:0005605
GO:GO:0043113 PROSITE:PS01186 Reactome:REACT_118324 GO:GO:0033691
GO:GO:0002162 eggNOG:NOG312635 HOGENOM:HOG000033860
HOVERGEN:HBG080471 GO:GO:0030548 GO:GO:0035374 GO:GO:0043395
GO:GO:0051491 GO:GO:2000541 GO:GO:0032321 GO:GO:0032314
InterPro:IPR002049 InterPro:IPR003645 InterPro:IPR001791
InterPro:IPR000082 Pfam:PF00053 Pfam:PF00054 Pfam:PF01390
SMART:SM00180 SMART:SM00274 SMART:SM00282 SMART:SM00200
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 PROSITE:PS50024
OMA:TNRWLRV GO:GO:0005796 GO:GO:0045213 GO:GO:0001934
InterPro:IPR011497 EMBL:AL928667 EMBL:BC150703 IPI:IPI00378698
IPI:IPI00648938 IPI:IPI00874558 UniGene:Mm.273098 PDB:3PVE
PDBsum:3PVE ProteinModelPortal:A2ASQ1 SMR:A2ASQ1 STRING:A2ASQ1
PaxDb:A2ASQ1 PRIDE:A2ASQ1 Ensembl:ENSMUST00000071248
Ensembl:ENSMUST00000075787 Ensembl:ENSMUST00000105574
Ensembl:ENSMUST00000105575 UCSC:uc008wgf.1
GeneTree:ENSGT00530000063501 InParanoid:A2ASQ1
Reactome:REACT_115433 ChiTaRS:AGRN EvolutionaryTrace:A2ASQ1
Bgee:A2ASQ1 Genevestigator:A2ASQ1 Uniprot:A2ASQ1
Length = 1950
Score = 414 (150.8 bits), Expect = 1.5e-50, Sum P(3) = 1.5e-50
Identities = 98/263 (37%), Positives = 140/263 (53%)
Query: 42 CLEDK--CNKTPCEHGGKC-ITTPGSSYCLCPLGFTGDLCQTRLDLQ-----VPQFNGSS 93
C ++K C PC C + + G + C CPLG +G C+T L+ + FNG S
Sbjct: 1467 CADEKNPCQPNPCHGSAPCHVLSRGGAKCACPLGRSGSFCETVLENAGSRPFLADFNGFS 1526
Query: 94 YLRYQGLG--EQYLS-LLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTF 150
YL +GL E+ L + L +VF A P+G+LLYNG + DG GDF++L L++R+++F +
Sbjct: 1527 YLELKGLHTFERDLGEKMALEMVFLARGPSGLLLYNGQKTDGKGDFVSLALHNRHLEFRY 1586
Query: 151 DLGTGAATLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPG----PFTQXXXX 206
DLG GAA +RS PI+LG W ++ L R GR LQV P SP P T
Sbjct: 1587 DLGKGAAIIRSKEPIALGTWVRVFLERNGRKGALQVGDGPRVLGESPKSRKVPHTMLNLK 1646
Query: 207 XXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNCA-HPC-- 263
GG PD++ ++ + S F G IQ V + H+L ++ V+V A HPC
Sbjct: 1647 EPLYVGGAPDFSKLARGAAVASGFDGAIQLVSLRGHQLLTQEHVLRAVDVAPFAGHPCTQ 1706
Query: 264 -ITQPC-GSGSCVPLYDGYKCVC 284
+ PC GSC+P Y+C+C
Sbjct: 1707 AVDNPCLNGGSCIPREATYECLC 1729
Score = 325 (119.5 bits), Expect = 4.7e-38, Sum P(4) = 4.7e-38
Identities = 87/249 (34%), Positives = 119/249 (47%)
Query: 47 CNKTPCEHGGKCITTP-GSSY-CLCPLGFTGDLCQTRLDL-QVPQFNGSSYLRYQGLGEQ 103
C+ PC HGG C G + C C G G +C+ ++ L VP F G S+L + L
Sbjct: 1215 CDSQPCLHGGTCQDLDSGKGFSCSCTAGRAGTVCE-KVQLPSVPAFKGHSFLAFPTLRAY 1273
Query: 104 YLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSN 163
+ L L + F+A+E G+LLYNG+ A G DF+AL L D +V F FD G+G A L S
Sbjct: 1274 HT--LRLALEFRALETEGLLLYNGN-ARGK-DFLALALLDGHVQFRFDTGSGPAVLTSLV 1329
Query: 164 PISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNI--VS 221
P+ G WH+L L+R R L VD SP GG+P+ + V
Sbjct: 1330 PVEPGRWHRLELSRHWRQGTLSVDGEAPVVGESPSGTDGLNLDTKLYVGGLPEEQVATVL 1389
Query: 222 PKVKIKSSFIGCIQKVLINNHELNILG---EAIQGVNVVNCA-HPCITQPCGSGS-CVPL 276
+ + GCI+ + INN +L + +Q V C HPC PC G+ C L
Sbjct: 1390 DRTSVGIGLKGCIRMLDINNQQLELSDWQRAVVQSSGVGECGDHPCSPNPCHGGALCQAL 1449
Query: 277 YDG-YKCVC 284
G + C C
Sbjct: 1450 EAGVFLCQC 1458
Score = 133 (51.9 bits), Expect = 9.9e-10, Sum P(3) = 9.9e-10
Identities = 35/133 (26%), Positives = 66/133 (49%)
Query: 121 GILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSNPISLGEWHKLRLTRTGR 180
G++L+ G + D++AL + D ++ ++DLG+ LRS+ ++ W ++R R R
Sbjct: 1809 GLVLWIGKVGERA-DYMALAIVDGHLQLSYDLGSQPVVLRSTVKVNTNRWLRVRAHREHR 1867
Query: 181 HAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNI--VSPKVKIKSSFIGCIQKVL 238
LQV SP TQ GG+ + PK + F+GC++ V+
Sbjct: 1868 EGSLQVGNEAPVTGSSPLGATQLDTDGALWLGGLQKLPVGQALPKA-YGTGFVGCLRDVV 1926
Query: 239 INNHELNILGEAI 251
+ + +L++L +A+
Sbjct: 1927 VGHRQLHLLEDAV 1939
Score = 130 (50.8 bits), Expect = 1.5e-50, Sum P(3) = 1.5e-50
Identities = 41/166 (24%), Positives = 72/166 (43%)
Query: 261 HPC---ITQPC-GSGSCVPLYDGYKCVCTQS-----CK----ESHLTEVMCASFDHGASF 307
HPC + PC GSC+P Y+C+C C+ E + ++ +FD G ++
Sbjct: 1702 HPCTQAVDNPCLNGGSCIPREATYECLCPGGFSGLHCEKGIVEKSVGDLETLAFD-GRTY 1760
Query: 308 LHYLDPEIIHSSGLLHYKFQLHVDFRITGYEF-----NIDMRIKTSSSSGLILWTGS-SQ 361
+ YL+ + S +D R E + ++ ++T ++ GL+LW G +
Sbjct: 1761 IEYLNA-VTESELTNEIPAPETLDSRALFSEKALQSNHFELSLRTEATQGLVLWIGKVGE 1819
Query: 362 SKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGVWHRLTVHR 407
D++AL I +G+ + Y K+N W R+ HR
Sbjct: 1820 RADYMALAIVDGHLQLSYDLGSQPVVLRST-VKVNTNRWLRVRAHR 1864
Score = 102 (41.0 bits), Expect = 3.6e-35, Sum P(4) = 3.6e-35
Identities = 40/153 (26%), Positives = 62/153 (40%)
Query: 261 HPCITQPC-GSGSCVPLY-DGYKCVCTQSCKESHLTEVMCASFDHGASFLHYLDPEIIHS 318
+PC PC GS C L G KC C S V+ ++ S P +
Sbjct: 1472 NPCQPNPCHGSAPCHVLSRGGAKCACPLGRSGSFCETVL----ENAGS-----RPFLADF 1522
Query: 319 SGLLHYKFQ-LHVDFRITGYEFNIDMRIKTSSSSGLILWTGS-SQSK-DFLALGIHNGYA 375
+G + + + LH R G + ++M SGL+L+ G + K DF++L +HN +
Sbjct: 1523 NGFSYLELKGLHTFERDLGEKMALEMVFLARGPSGLLLYNGQKTDGKGDFVSLALHNRHL 1582
Query: 376 HVMYXXXXXXXXXXXXQTKINNGVWHRLTVHRN 408
Y + I G W R+ + RN
Sbjct: 1583 EFRYDLGKGAAIIRSKEP-IALGTWVRVFLERN 1614
Score = 98 (39.6 bits), Expect = 9.9e-10, Sum P(3) = 9.9e-10
Identities = 20/53 (37%), Positives = 29/53 (54%)
Query: 51 PCEHGGKCITTPGSSYCLCPLGFTGDLCQTRL------DLQVPQFNGSSYLRY 97
PC +GG CI + CLCP GF+G C+ + DL+ F+G +Y+ Y
Sbjct: 1711 PCLNGGSCIPREATYECLCPGGFSGLHCEKGIVEKSVGDLETLAFDGRTYIEY 1763
Score = 89 (36.4 bits), Expect = 0.00034, Sum P(4) = 0.00034
Identities = 17/73 (23%), Positives = 35/73 (47%)
Query: 337 YEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTKIN 396
+ + + + + GL+L+ G+++ KDFLAL + +G+ + +
Sbjct: 1274 HTLRLALEFRALETEGLLLYNGNARGKDFLALALLDGHVQFRFDTGSGPAVLTSL-VPVE 1332
Query: 397 NGVWHRLTVHRNF 409
G WHRL + R++
Sbjct: 1333 PGRWHRLELSRHW 1345
Score = 69 (29.3 bits), Expect = 2.6e-07, Sum P(3) = 2.6e-07
Identities = 17/56 (30%), Positives = 24/56 (42%)
Query: 27 IQLNDGNKIKGRSK---ECLEDKCNKTPCEHGGKC-ITTPGSSYCLCPLGFTGDLC 78
++L+D + +S EC + C+ PC G C G C CP G G C
Sbjct: 1412 LELSDWQRAVVQSSGVGECGDHPCSPNPCHGGALCQALEAGVFLCQCPPGRFGPTC 1467
Score = 62 (26.9 bits), Expect = 4.7e-38, Sum P(4) = 4.7e-38
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCP 70
C + CE G C+ G + C+CP
Sbjct: 796 CVEMHCEFGASCVEEAGFAQCVCP 819
Score = 61 (26.5 bits), Expect = 0.00034, Sum P(4) = 0.00034
Identities = 22/75 (29%), Positives = 37/75 (49%)
Query: 437 LHRTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVEDIEELT---RSKYHHSFKG 493
L R +Q + +D + + S + LN D+ LYVGG+ + + T R+ KG
Sbjct: 1341 LSRHWRQGTLSVDGEAPVVGESPSGTDGLNLDTKLYVGGLPEEQVATVLDRTSVGIGLKG 1400
Query: 494 WISNLILSNDYQVKL 508
I L ++N Q++L
Sbjct: 1401 CIRMLDINNQ-QLEL 1414
Score = 60 (26.2 bits), Expect = 7.6e-38, Sum P(4) = 7.6e-38
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 36 KGRSKEC-LEDKCNKTPCEHGGKCITTPGSSYCLC 69
K RS +C D+C +T C+ C++ G +C C
Sbjct: 278 KVRSGQCQTRDQCPET-CQFNSVCLSRRGRPHCSC 311
Score = 58 (25.5 bits), Expect = 0.00034, Sum P(4) = 0.00034
Identities = 15/37 (40%), Positives = 19/37 (51%)
Query: 250 AIQGVNVVNCAHPCITQPCGS--GSCVPLYDGYKCVC 284
A QGV + C C P GS G+C P+ G +C C
Sbjct: 675 AAQGVGLAGCPSTCHCNPHGSYSGTCDPV-TG-QCSC 709
Score = 56 (24.8 bits), Expect = 1.5e-50, Sum P(3) = 1.5e-50
Identities = 14/69 (20%), Positives = 34/69 (49%)
Query: 436 RLHRTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVEDIE--ELTRSKYHHSFKG 493
R HR ++ +++ + + S QL+TD L++GG++ + + Y F G
Sbjct: 1861 RAHREHREGSLQVGNEAPVTGSSPLGATQLDTDGALWLGGLQKLPVGQALPKAYGTGFVG 1920
Query: 494 WISNLILSN 502
+ ++++ +
Sbjct: 1921 CLRDVVVGH 1929
Score = 56 (24.8 bits), Expect = 2.0e-37, Sum P(4) = 2.0e-37
Identities = 15/47 (31%), Positives = 21/47 (44%)
Query: 28 QLNDGNKIKG-RSKEC-LEDKCNKTPCEHGGKCI-TTPG-SSYCLCP 70
Q N +I+ R C D C C G C+ + G ++ CLCP
Sbjct: 122 QCNQQRRIRLLRQGPCGSRDPCANVTCSFGSTCVPSADGQTASCLCP 168
Score = 48 (22.0 bits), Expect = 2.4e-34, Sum P(4) = 2.4e-34
Identities = 10/20 (50%), Positives = 11/20 (55%)
Query: 465 LNTDSGLYVGGVEDIEELTR 484
LN LYVGG D +L R
Sbjct: 1643 LNLKEPLYVGGAPDFSKLAR 1662
Score = 48 (22.0 bits), Expect = 9.9e-10, Sum P(3) = 9.9e-10
Identities = 13/41 (31%), Positives = 22/41 (53%)
Query: 1 MVKSDNQVILDDWNTVRVF--RHRWDAWIQLNDGNKIKGRS 39
+++S + L W VRVF R+ +Q+ DG ++ G S
Sbjct: 1594 IIRSKEPIALGTW--VRVFLERNGRKGALQVGDGPRVLGES 1632
Score = 44 (20.5 bits), Expect = 3.4e-36, Sum P(4) = 3.4e-36
Identities = 7/23 (30%), Positives = 8/23 (34%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLC 69
C C G C G + C C
Sbjct: 363 CRGAQCAFGATCTVKNGKAVCEC 385
Score = 40 (19.1 bits), Expect = 5.2e-38, Sum P(2) = 5.2e-38
Identities = 12/42 (28%), Positives = 20/42 (47%)
Query: 441 GKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVEDIEEL 482
G C+ R + Y + + G F L+ + G+ V D+E L
Sbjct: 1715 GGSCIPR-EATY--ECLCPGGFSGLHCEKGIVEKSVGDLETL 1753
Score = 37 (18.1 bits), Expect = 6.4e-06, Sum P(4) = 6.4e-06
Identities = 7/12 (58%), Positives = 7/12 (58%)
Query: 260 AHPCITQPCGSG 271
A PC CGSG
Sbjct: 556 AGPCEPAECGSG 567
>UNIPROTKB|I3LGD9 [details] [associations]
symbol:I3LGD9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043236 "laminin binding" evidence=IEA] [GO:0043113
"receptor clustering" evidence=IEA] [GO:0007213 "G-protein coupled
acetylcholine receptor signaling pathway" evidence=IEA] [GO:0005605
"basal lamina" evidence=IEA] InterPro:IPR000742 InterPro:IPR002350
InterPro:IPR004850 Pfam:PF00008 Pfam:PF00050 Pfam:PF03146
Pfam:PF07648 PROSITE:PS50026 PROSITE:PS51121 SMART:SM00181
SMART:SM00280 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0005605 GO:GO:0043113 GO:GO:0007213
PROSITE:PS01186 InterPro:IPR002049 InterPro:IPR003645
InterPro:IPR001791 InterPro:IPR000082 InterPro:IPR008993
Pfam:PF00053 Pfam:PF00054 Pfam:PF01390 SMART:SM00180 SMART:SM00274
SMART:SM00282 SMART:SM00200 SUPFAM:SSF50242 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 PROSITE:PS50024 OMA:TNRWLRV
InterPro:IPR011497 GeneTree:ENSGT00530000063501 EMBL:FP565685
Ensembl:ENSSSCT00000026215 Uniprot:I3LGD9
Length = 2039
Score = 459 (166.6 bits), Expect = 2.0e-50, Sum P(3) = 2.0e-50
Identities = 122/387 (31%), Positives = 187/387 (48%)
Query: 42 CLEDK--CNKTPCEHGGKCITTP-GSSYCLCPLGFTGDLCQT---RLDLQVP---QFNGS 92
C E+K C PC C P G + C CP G G LCQT R D P FN
Sbjct: 1578 CAEEKGPCQPNPCHGAAPCHVLPQGEAQCECPRGRGGSLCQTASERDDAMQPFLADFNSF 1637
Query: 93 SYLRYQGLG--EQYLS-LLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFT 149
SYL +GL E+ L ++L +VF A P+G+LLYNG + DG GDF++L L++R ++F
Sbjct: 1638 SYLELKGLHTFERDLGEKMELEVVFLARGPSGLLLYNGQKTDGKGDFVSLALHNRLLEFR 1697
Query: 150 FDLGTGAATLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXX 209
+DLG G + S P++LG W ++ L R GR ++V P SP P T
Sbjct: 1698 YDLGRGRRSSGSKEPVALGVWTRVSLERNGRKGAMRVGDGPRVLGESPVPHTILNLKEPL 1757
Query: 210 XXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNCA-HPCITQ-- 266
GG PD++ ++ + S F G IQ V +N +L +Q V+V + A HPC TQ
Sbjct: 1758 YIGGAPDFSRLARAAAVSSGFDGAIQLVALNGRQLLTREHVVQAVDVSSFADHPC-TQAA 1816
Query: 267 --PCGSG-SCVPLYDGYKCVCTQSCKESHLTEVMCASFDHGASFLHYLDPEIIHSSGLLH 323
PC +G SC+P Y+C+C H + + + A D + + G +
Sbjct: 1817 GHPCLNGASCLPRGASYECLCPGGFSGLHCEKGL---IEKSAG-----DLDALAFDGRTY 1868
Query: 324 YKFQLHVDFRITGYEFN-IDMRIKTSSSSGLILWTGSSQSK-DFLALGIHNGYAHVMYXX 381
++ V + N ++ ++T ++ GL+LW+G + + D++AL I +G+ + Y
Sbjct: 1869 VEYLNAVTESEKALQSNHFELSLRTEATQGLVLWSGKATERADYIALAIVDGHLQLTYDL 1928
Query: 382 XXXXXXXXXXQTKINNGVWHRLTVHRN 408
+N W R+ HR+
Sbjct: 1929 GSQPVVLRST-VAVNTNRWLRVRAHRD 1954
Score = 329 (120.9 bits), Expect = 2.2e-31, Sum P(3) = 2.2e-31
Identities = 89/247 (36%), Positives = 115/247 (46%)
Query: 47 CNKTPCEHGGKCITT-PGSSY-CLCPLGFTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQY 104
C+ PC HGG C PG ++ C CP G G C+ L L P F G S+L + L +
Sbjct: 1332 CDSQPCLHGGTCQDQGPGGAFTCSCPAGRGGTFCEEALPLSRPAFGGRSFLAFPTLRAYH 1391
Query: 105 LSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSNP 164
L L + F+A+EP G+LLYNG+ A G DF+AL L V FD G+G A L SS P
Sbjct: 1392 T--LRLALEFRALEPEGLLLYNGN-ARGK-DFLALALLGGRVQLRFDTGSGPAVLTSSVP 1447
Query: 165 ISLGEWHKLRLTRTGRHAYLQVD-RFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSPK 223
+ G WH+L L+R R L V R P G GG V +
Sbjct: 1448 VQPGRWHRLELSRHWRRGTLSVGGRRPRGVQCHSGLREGVPLTPGPHLGGR-----VLER 1502
Query: 224 VKIKSSFIGCIQKVLINNHELNIL---GEAIQGVNVVNCA-HPCITQPC-GSGSCVPLYD 278
+ GCI+ + +NN L + G A + V C HPC+ PC GS C L
Sbjct: 1503 TSVSVGLRGCIRLLDVNNQRLELSAWQGSATRSSRVGECGDHPCVPSPCLGSAPCQALEA 1562
Query: 279 G-YKCVC 284
G + C C
Sbjct: 1563 GMFHCQC 1569
Score = 221 (82.9 bits), Expect = 2.5e-17, Sum P(2) = 2.5e-17
Identities = 64/224 (28%), Positives = 103/224 (45%)
Query: 51 PCEHGGKCITTPGSSY-CLCPLGFTGDLCQTRL------DLQVPQFNGSSYLRYQGL--- 100
PC +G C+ G+SY CLCP GF+G C+ L DL F+G +Y+ Y
Sbjct: 1819 PCLNGASCLPR-GASYECLCPGGFSGLHCEKGLIEKSAGDLDALAFDGRTYVEYLNAVTE 1877
Query: 101 GEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLR 160
E+ L + + G++L++G +A D+IAL + D ++ T+DLG+ LR
Sbjct: 1878 SEKALQSNHFELSLRTEATQGLVLWSG-KATERADYIALAIVDGHLQLTYDLGSQPVVLR 1936
Query: 161 SSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDY--N 218
S+ ++ W ++R R R LQV SP TQ GG+
Sbjct: 1937 STVAVNTNRWLRVRAHRDQREGSLQVGNEAPVTGSSPLGATQLDTDGALWLGGLEKLPGG 1996
Query: 219 IVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNCAHP 262
PK + F+GC++ V++ L++L +A+ + C P
Sbjct: 1997 QALPKA-YSTGFVGCLRDVVVGRRPLHLLEDAVTKPELRPCPTP 2039
Score = 88 (36.0 bits), Expect = 0.00024, Sum P(3) = 0.00024
Identities = 38/153 (24%), Positives = 62/153 (40%)
Query: 262 PCITQPC-GSGSCVPLYDG--YKCVCTQSCKESHLTEVMCASFDH--GASFLHYLDPEII 316
PC +QPC G+C G + C C + E + S G SFL + P +
Sbjct: 1331 PCDSQPCLHGGTCQDQGPGGAFTCSCPAGRGGTFCEEALPLSRPAFGGRSFLAF--PTL- 1387
Query: 317 HSSGLLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAH 376
++ +L ++FR E GL+L+ G+++ KDFLAL + G
Sbjct: 1388 ----RAYHTLRLALEFRALEPE-------------GLLLYNGNARGKDFLALALLGGRVQ 1430
Query: 377 VMYXXXXXXXXXXXXQTKINNGVWHRLTVHRNF 409
+ + + G WHRL + R++
Sbjct: 1431 LRFDTGSGPAVLTSS-VPVQPGRWHRLELSRHW 1462
Score = 81 (33.6 bits), Expect = 2.0e-50, Sum P(3) = 2.0e-50
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCP 70
C + PCE G C+ GS++C+CP
Sbjct: 904 CAEMPCEFGASCVEEAGSAHCVCP 927
Score = 62 (26.9 bits), Expect = 1.9e-48, Sum P(3) = 1.9e-48
Identities = 14/42 (33%), Positives = 17/42 (40%)
Query: 38 RSKECLEDKCNKTPCEHGGKC-ITTPGSSYCLCPLGFTGDLC 78
R EC + C +PC C G +C CP G G C
Sbjct: 1537 RVGECGDHPCVPSPCLGSAPCQALEAGMFHCQCPPGRFGPTC 1578
Score = 59 (25.8 bits), Expect = 2.0e-50, Sum P(3) = 2.0e-50
Identities = 15/67 (22%), Positives = 33/67 (49%)
Query: 436 RLHRTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVEDIE--ELTRSKYHHSFKG 493
R HR ++ +++ + + S QL+TD L++GG+E + + Y F G
Sbjct: 1950 RAHRDQREGSLQVGNEAPVTGSSPLGATQLDTDGALWLGGLEKLPGGQALPKAYSTGFVG 2009
Query: 494 WISNLIL 500
+ ++++
Sbjct: 2010 CLRDVVV 2016
Score = 59 (25.8 bits), Expect = 3.9e-48, Sum P(3) = 3.9e-48
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 36 KGRSKECL-EDKCNKTPCEHGGKCITTPGSSYCLC 69
K RS +CL D+C +T C C++ G C C
Sbjct: 386 KVRSGQCLPRDQCPET-CRFSAVCLSRRGRPRCSC 419
Score = 59 (25.8 bits), Expect = 2.2e-31, Sum P(3) = 2.2e-31
Identities = 28/108 (25%), Positives = 42/108 (38%)
Query: 403 LTVHRNFMVVMHGSSHTRSNKSSKIEFKCLSIQR---LHRTGKQCLIRIDTDYSMQSISG 459
L +H + + R + SK E L + L R G++ +R+ + S
Sbjct: 1687 LALHNRLLEFRYDLGRGRRSSGSK-EPVALGVWTRVSLERNGRKGAMRVGDGPRVLGESP 1745
Query: 460 GKFEQLNTDSGLYVGGVEDIEELTRSKYHHS-FKGWISNLILSNDYQV 506
LN LY+GG D L R+ S F G I L+ N Q+
Sbjct: 1746 VPHTILNLKEPLYIGGAPDFSRLARAAAVSSGFDGAIQ-LVALNGRQL 1792
Score = 55 (24.4 bits), Expect = 1.0e-47, Sum P(3) = 1.0e-47
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 38 RSKEC-LEDKCNKTPCEHGGKCI-TTPG-SSYCLCP 70
R C + D C+ C G C ++ G ++ CLCP
Sbjct: 241 RRGPCGMRDPCSNITCSFGSTCARSSDGLTATCLCP 276
Score = 44 (20.5 bits), Expect = 1.4e-46, Sum P(3) = 1.4e-46
Identities = 7/23 (30%), Positives = 9/23 (39%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLC 69
C C G C G + C+C
Sbjct: 471 CLGVQCPFGATCAVKNGEAECVC 493
>UNIPROTKB|F1Q2Z6 [details] [associations]
symbol:AGRN "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043113 "receptor clustering" evidence=IEA]
[GO:0005605 "basal lamina" evidence=IEA] [GO:0043236 "laminin
binding" evidence=IEA] [GO:0007213 "G-protein coupled acetylcholine
receptor signaling pathway" evidence=IEA] InterPro:IPR000742
InterPro:IPR002350 InterPro:IPR004850 Pfam:PF00008 Pfam:PF00050
Pfam:PF03146 Pfam:PF07648 PROSITE:PS50026 PROSITE:PS51121
SMART:SM00181 SMART:SM00280 GO:GO:0005615 GO:GO:0009986
GO:GO:0043525 GO:GO:0007528 GO:GO:0045944 GO:GO:0007009
GO:GO:0045202 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0005605 GO:GO:0043113 GO:GO:0007213
PROSITE:PS01186 CTD:375790 KO:K06254 GO:GO:0030548 GO:GO:2000541
GO:GO:0032314 InterPro:IPR002049 InterPro:IPR003645
InterPro:IPR001791 InterPro:IPR000082 InterPro:IPR008993
Pfam:PF00053 Pfam:PF00054 Pfam:PF01390 SMART:SM00180 SMART:SM00274
SMART:SM00282 SMART:SM00200 SUPFAM:SSF50242 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 PROSITE:PS50024 OMA:TNRWLRV
GO:GO:0045213 GO:GO:0001934 InterPro:IPR011497
GeneTree:ENSGT00530000063501 GO:GO:0008582 EMBL:AAEX03003837
EMBL:AAEX03003838 RefSeq:XP_536713.3 Ensembl:ENSCAFT00000030741
GeneID:479574 KEGG:cfa:479574 Uniprot:F1Q2Z6
Length = 2046
Score = 461 (167.3 bits), Expect = 3.6e-49, Sum P(3) = 3.6e-49
Identities = 123/385 (31%), Positives = 186/385 (48%)
Query: 42 CLEDK--CNKTPCEHGGKCITTP-GSSYCLCPLGFTGDLCQT--RLDLQVP---QFNGSS 93
C DK C PC C P G + C CP G G +CQT D P F+G S
Sbjct: 1586 CSGDKNPCEPNPCHGAAPCRVLPDGEAKCECPRGRGGAICQTVSERDSSQPFLADFHGFS 1645
Query: 94 YLRYQGLG--EQYLS-LLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTF 150
YL +GL E+ L L L +VF A P+G+LLYNG + DG GDF++L L+DR+++F +
Sbjct: 1646 YLELKGLHTFERDLGEKLALEVVFLARGPSGLLLYNGQKTDGKGDFVSLALHDRFLEFRY 1705
Query: 151 DLGTGAATLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXX 210
DLG GAA +RS P++L W ++ L R GR ++V P SP P T
Sbjct: 1706 DLGKGAAVIRSKEPVALDTWTRVSLERNGRKGAMRVSDGPRVLGESPVPHTVLNLKEPLY 1765
Query: 211 XGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNCAH-PCITQ--- 266
GG PD++ ++ + S F G IQ V + H+L ++ V+V + AH PC TQ
Sbjct: 1766 VGGAPDFSKLARAAAVFSGFDGAIQLVSLKGHQLLSQEHVVRSVDVSSFAHHPC-TQASG 1824
Query: 267 -PCGSG-SCVPLYDGYKCVCTQSCKESHLTEVMCASFDHGASFLHYLDPEIIHSSGLLHY 324
PC +G SC+P Y+C+C H + + + A D + + G +
Sbjct: 1825 HPCLNGASCLPREASYECLCPGGFSGLHCEKGL---IEKSAG-----DVDALAFDGQTYV 1876
Query: 325 KFQLHVDFRITGYEFN-IDMRIKTSSSSGLILWTGSSQSK-DFLALGIHNGYAHVMYXXX 382
++ V + N ++ ++T ++ GL+LW+G + + D++AL I +G + Y
Sbjct: 1877 EYLNAVTESEKALQSNHFELSLRTEATQGLVLWSGKATERADYVALAIVDGRLQLTYDLG 1936
Query: 383 XXXXXXXXXQTKINNGVWHRLTVHR 407
+N W R+ HR
Sbjct: 1937 SQPVVLRST-VPVNTNRWLRVRAHR 1960
Score = 369 (135.0 bits), Expect = 2.1e-36, Sum P(3) = 2.1e-36
Identities = 93/248 (37%), Positives = 123/248 (49%)
Query: 47 CNKTPCEHGGKCIT--TPGSSYCLCPLGFTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQY 104
C+ PC HGG C + G C CP+G G +C+ L L VP FNG S+L + L +
Sbjct: 1334 CDSQPCLHGGTCQDQDSGGGFTCSCPVGRRGAVCEKALYLSVPAFNGRSFLAFPTLRAYH 1393
Query: 105 LSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSNP 164
L L + F+A+EP G+LLYNG+ A G DF+AL L V FD G+G A L SS P
Sbjct: 1394 T--LRLALEFRALEPQGLLLYNGN-AQGK-DFLALTLLGGRVQLRFDTGSGPAVLTSSVP 1449
Query: 165 ISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPD--YNIVSP 222
I G WH+L L+R R L VD P SP GG+P+ ++V
Sbjct: 1450 IEPGRWHRLELSRHWRRGTLSVDGEPLVLGHSPSGTDGLNLDTDLFVGGIPEDQASVVLE 1509
Query: 223 KVKIKSSFIGCIQKVLINNHELNIL---GEAIQGVNVVNCA-HPCITQPCGSGS-CVPLY 277
+ I GCI+ + +NN L + G A + V C HPC+ PC G+ C L
Sbjct: 1510 RTSISVGLKGCIRLLDVNNQRLELSSWPGAAARSSGVGECGDHPCLPNPCLDGAPCQALE 1569
Query: 278 DG-YKCVC 284
G + C C
Sbjct: 1570 AGMFHCQC 1577
Score = 229 (85.7 bits), Expect = 5.8e-17, Sum P(2) = 5.8e-17
Identities = 63/223 (28%), Positives = 102/223 (45%)
Query: 51 PCEHGGKCITTPGSSYCLCPLGFTGDLCQTRL------DLQVPQFNGSSYLRYQGL---G 101
PC +G C+ S CLCP GF+G C+ L D+ F+G +Y+ Y
Sbjct: 1826 PCLNGASCLPREASYECLCPGGFSGLHCEKGLIEKSAGDVDALAFDGQTYVEYLNAVTES 1885
Query: 102 EQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRS 161
E+ L + + G++L++G +A D++AL + D + T+DLG+ LRS
Sbjct: 1886 EKALQSNHFELSLRTEATQGLVLWSG-KATERADYVALAIVDGRLQLTYDLGSQPVVLRS 1944
Query: 162 SNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNI-- 219
+ P++ W ++R R R LQV SP TQ GG+ I
Sbjct: 1945 TVPVNTNRWLRVRAHREQREGSLQVGNEAPVTGSSPLGATQLDTDGTLWLGGLEKLPIGQ 2004
Query: 220 VSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNCAHP 262
PK + F+GC++ V++ L++L +A+ + CA P
Sbjct: 2005 ALPKA-YGTGFVGCLRDVVVGQRPLHLLEDAVTKPELRPCAAP 2046
Score = 69 (29.3 bits), Expect = 3.6e-49, Sum P(3) = 3.6e-49
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 45 DKCNKTPCEHGGKCITTPGSSYCLCP 70
+ C + CE G C+ GS+ C+CP
Sbjct: 901 ETCAEMHCEFGASCVEEAGSARCVCP 926
Score = 67 (28.6 bits), Expect = 5.8e-49, Sum P(3) = 5.8e-49
Identities = 14/39 (35%), Positives = 16/39 (41%)
Query: 41 ECLEDKCNKTPCEHGGKC-ITTPGSSYCLCPLGFTGDLC 78
EC + C PC G C G +C CP G G C
Sbjct: 1548 ECGDHPCLPNPCLDGAPCQALEAGMFHCQCPPGRFGPTC 1586
Score = 57 (25.1 bits), Expect = 3.6e-49, Sum P(3) = 3.6e-49
Identities = 16/67 (23%), Positives = 33/67 (49%)
Query: 436 RLHRTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVED--IEELTRSKYHHSFKG 493
R HR ++ +++ + + S QL+TD L++GG+E I + Y F G
Sbjct: 1957 RAHREQREGSLQVGNEAPVTGSSPLGATQLDTDGTLWLGGLEKLPIGQALPKAYGTGFVG 2016
Query: 494 WISNLIL 500
+ ++++
Sbjct: 2017 CLRDVVV 2023
Score = 57 (25.1 bits), Expect = 2.1e-36, Sum P(3) = 2.1e-36
Identities = 21/71 (29%), Positives = 31/71 (43%)
Query: 437 LHRTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVEDIEELTRSKYHHS-FKGWI 495
L R G++ +R+ + S LN LYVGG D +L R+ S F G I
Sbjct: 1730 LERNGRKGAMRVSDGPRVLGESPVPHTVLNLKEPLYVGGAPDFSKLARAAAVFSGFDGAI 1789
Query: 496 SNLILSNDYQV 506
L+ +Q+
Sbjct: 1790 Q-LVSLKGHQL 1799
Score = 56 (24.8 bits), Expect = 8.1e-48, Sum P(3) = 8.1e-48
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 45 DKCNKTPCEHGGKCI-TTPG-SSYCLCP 70
D C+ C G C+ + G ++ CLCP
Sbjct: 248 DPCSNVTCSFGSTCVRSADGQTATCLCP 275
Score = 48 (22.0 bits), Expect = 5.5e-47, Sum P(3) = 5.5e-47
Identities = 11/35 (31%), Positives = 16/35 (45%)
Query: 36 KGRSKECL-EDKCNKTPCEHGGKCITTPGSSYCLC 69
K RS +C +D+C C C++ G C C
Sbjct: 385 KVRSGQCQPQDQCPDV-CRFNAVCLSRRGRPRCSC 418
Score = 43 (20.2 bits), Expect = 1.8e-46, Sum P(3) = 1.8e-46
Identities = 7/23 (30%), Positives = 9/23 (39%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLC 69
C C G C G + C+C
Sbjct: 470 CLGVRCPFGATCAVKNGEAECVC 492
Score = 43 (20.2 bits), Expect = 5.9e-35, Sum P(3) = 5.9e-35
Identities = 17/79 (21%), Positives = 34/79 (43%)
Query: 441 GKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVEDIEELT-RSKYHHSFKGWISN-- 497
G CL R + S + + G F L+ + GL D++ L + + + ++
Sbjct: 1830 GASCLPR---EASYECLCPGGFSGLHCEKGLIEKSAGDVDALAFDGQTYVEYLNAVTESE 1886
Query: 498 -LILSNDYQVKLPLSRSQG 515
+ SN +++ L +QG
Sbjct: 1887 KALQSNHFELSLRTEATQG 1905
>UNIPROTKB|F1MSI2 [details] [associations]
symbol:AGRN "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043113 "receptor clustering" evidence=IEA] [GO:0005605
"basal lamina" evidence=IEA] [GO:0043236 "laminin binding"
evidence=IEA] [GO:0007213 "G-protein coupled acetylcholine receptor
signaling pathway" evidence=IEA] InterPro:IPR000742
InterPro:IPR002350 InterPro:IPR004850 Pfam:PF00008 Pfam:PF00050
Pfam:PF03146 Pfam:PF07648 PROSITE:PS50026 PROSITE:PS51121
SMART:SM00181 SMART:SM00280 GO:GO:0005615 GO:GO:0009986
GO:GO:0043525 GO:GO:0007528 GO:GO:0045944 GO:GO:0007009
GO:GO:0045202 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0005605 GO:GO:0043113 GO:GO:0007213
PROSITE:PS01186 GO:GO:0030548 GO:GO:2000541 GO:GO:0032314
InterPro:IPR002049 InterPro:IPR003645 InterPro:IPR001791
InterPro:IPR000082 InterPro:IPR008993 Pfam:PF00053 Pfam:PF00054
Pfam:PF01390 SMART:SM00180 SMART:SM00274 SMART:SM00282
SMART:SM00200 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 PROSITE:PS50024 OMA:TNRWLRV GO:GO:0045213
GO:GO:0001934 InterPro:IPR011497 GeneTree:ENSGT00530000063501
GO:GO:0008582 EMBL:DAAA02043249 IPI:IPI00708223
Ensembl:ENSBTAT00000017563 Uniprot:F1MSI2
Length = 2032
Score = 451 (163.8 bits), Expect = 1.9e-48, Sum P(3) = 1.9e-48
Identities = 117/380 (30%), Positives = 182/380 (47%)
Query: 44 EDKCNKTPCEHGGKCITTP-GSSYCLCPLGFTGDLCQTRLDLQVPQ-----FNGSSYLRY 97
+D C PC C P G + C CP G G LCQT + + Q F+ SYL
Sbjct: 1576 KDPCQPNPCHGAAPCRVLPQGEAKCECPHGREGSLCQTVSEPEDNQPFLADFSSFSYLEL 1635
Query: 98 QGLG--EQYLS-LLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGT 154
+GL E+ L + L +VF A P+G+LLYNG + DG GDF++L L++ ++F +DLG
Sbjct: 1636 KGLHTFERDLGEKMALEVVFLARSPSGLLLYNGQKTDGKGDFVSLALHNGLLEFRYDLGK 1695
Query: 155 GAATLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGV 214
GAA +RS P++LG W ++ L R GR ++V P SP P T GG
Sbjct: 1696 GAAVIRSKEPVALGAWTRVSLERNGRKGAMRVGDGPRVLGESPVPHTVLNLKEPLFVGGA 1755
Query: 215 PDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNCA-HPCIT---QPCGS 270
PD++ ++ + S F G IQ V +N +L ++ V+V + A HPC QPC
Sbjct: 1756 PDFSKLARAAAVSSGFDGAIQLVSLNGRQLLTRENVVRAVDVSSFADHPCTQAEGQPCLH 1815
Query: 271 G-SCVPLYDGYKCVCTQSCKESHLTEVMCASFDHGASFLHYLDPEIIHSSGLLHYKFQLH 329
G SC+P Y+C+C H + + + A D + + G + ++
Sbjct: 1816 GASCLPREASYECLCPAGFSGLHCEKGL---IEKSAG-----DLDALAFDGRTYIEYLNA 1867
Query: 330 VDFRITGYEFN-IDMRIKTSSSSGLILWTGSSQSK-DFLALGIHNGYAHVMYXXXXXXXX 387
V + N ++ ++T ++ GL+LW+G + + D++AL I +G + Y
Sbjct: 1868 VTESEKALQSNHFELSLRTEATQGLVLWSGKATERADYIALAIVDGRLQLAYDLGSQPVV 1927
Query: 388 XXXXQTKINNGVWHRLTVHR 407
+N W R+ HR
Sbjct: 1928 LRST-VPVNTNRWLRVRAHR 1946
Score = 340 (124.7 bits), Expect = 2.3e-39, Sum P(4) = 2.3e-39
Identities = 88/248 (35%), Positives = 116/248 (46%)
Query: 47 CNKTPCEHGGKCITT-PGSSY-CLCPLGFTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQY 104
C+ PC HGG C G+ + C CP G G +C+ L VP F G S+L + L +
Sbjct: 1320 CDSQPCLHGGTCQDQGSGADFTCSCPAGTGGAVCEKALHPSVPAFGGHSFLAFPTLRAYH 1379
Query: 105 LSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSNP 164
L L + F+A+EP G+LLYNG+ A G DF+ L L V F FD G+G A L SS P
Sbjct: 1380 T--LRLALEFRALEPQGLLLYNGN-ARGK-DFLGLVLLGGRVQFRFDTGSGPAVLTSSVP 1435
Query: 165 ISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPD--YNIVSP 222
+ G WH L L+R R L VD SP GGVP+ + V
Sbjct: 1436 VQPGRWHHLELSRHWRQGTLSVDGETPVLGQSPSGTDGLNLDTDLFVGGVPEDQASTVLE 1495
Query: 223 KVKIKSSFIGCIQKVLINNHELNILG---EAIQGVNVVNCA-HPCITQPC-GSGSCVPLY 277
+ + GCI+ + +NN L + A + V C HPC+ PC G C L
Sbjct: 1496 RTSVSIGLRGCIRLLDVNNQRLELSSWPESATRSSGVGKCGDHPCLPSPCLGGAPCQALE 1555
Query: 278 DG-YKCVC 284
G + C C
Sbjct: 1556 AGRFHCQC 1563
Score = 222 (83.2 bits), Expect = 2.1e-16, Sum P(2) = 2.1e-16
Identities = 61/212 (28%), Positives = 96/212 (45%)
Query: 51 PCEHGGKCITTPGSSYCLCPLGFTGDLCQTRL------DLQVPQFNGSSYLRYQGL---G 101
PC HG C+ S CLCP GF+G C+ L DL F+G +Y+ Y
Sbjct: 1812 PCLHGASCLPREASYECLCPAGFSGLHCEKGLIEKSAGDLDALAFDGRTYIEYLNAVTES 1871
Query: 102 EQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRS 161
E+ L + + G++L++G +A D+IAL + D + +DLG+ LRS
Sbjct: 1872 EKALQSNHFELSLRTEATQGLVLWSG-KATERADYIALAIVDGRLQLAYDLGSQPVVLRS 1930
Query: 162 SNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNI-- 219
+ P++ W ++R R R LQV SP TQ GG+
Sbjct: 1931 TVPVNTNRWLRVRAHRKQREGSLQVGNEAPVTGSSPLGATQLDTDGALWLGGLEKLPTGQ 1990
Query: 220 VSPKVKIKSSFIGCIQKVLINNHELNILGEAI 251
PK + F+GC++ V++ +++L +AI
Sbjct: 1991 ALPKA-YGTGFVGCLRDVVVGQRPVHLLEDAI 2021
Score = 112 (44.5 bits), Expect = 2.3e-39, Sum P(4) = 2.3e-39
Identities = 43/151 (28%), Positives = 63/151 (41%)
Query: 262 PCITQPC-GSGSCVPLYDGY-KCVCTQSCKESHLTEVMCASFDHGASFLHYLDPEIIHSS 319
PC PC G+ C L G KC C +E L + + D+ FL D S
Sbjct: 1578 PCQPNPCHGAAPCRVLPQGEAKCECPHG-REGSLCQTVSEPEDN-QPFL--AD---FSSF 1630
Query: 320 GLLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGS-SQSK-DFLALGIHNGYAHV 377
L K LH R G + +++ S SGL+L+ G + K DF++L +HNG
Sbjct: 1631 SYLELK-GLHTFERDLGEKMALEVVFLARSPSGLLLYNGQKTDGKGDFVSLALHNGLLEF 1689
Query: 378 MYXXXXXXXXXXXXQTKINNGVWHRLTVHRN 408
Y + + G W R+++ RN
Sbjct: 1690 RYDLGKGAAVIRSKEP-VALGAWTRVSLERN 1719
Score = 71 (30.1 bits), Expect = 1.9e-48, Sum P(3) = 1.9e-48
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCP 70
C + CE G C+ GS++C+CP
Sbjct: 892 CAEMLCEFGASCVEEAGSAHCVCP 915
Score = 58 (25.5 bits), Expect = 1.9e-48, Sum P(3) = 1.9e-48
Identities = 15/67 (22%), Positives = 33/67 (49%)
Query: 436 RLHRTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVEDIE--ELTRSKYHHSFKG 493
R HR ++ +++ + + S QL+TD L++GG+E + + Y F G
Sbjct: 1943 RAHRKQREGSLQVGNEAPVTGSSPLGATQLDTDGALWLGGLEKLPTGQALPKAYGTGFVG 2002
Query: 494 WISNLIL 500
+ ++++
Sbjct: 2003 CLRDVVV 2009
Score = 56 (24.8 bits), Expect = 7.0e-47, Sum P(3) = 7.0e-47
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 45 DKCNKTPCEHGGKCI-TTPG-SSYCLCP 70
D C+ C G C+ + G ++ CLCP
Sbjct: 237 DPCSNVTCSFGSTCVPSADGLTATCLCP 264
Score = 55 (24.4 bits), Expect = 8.9e-47, Sum P(3) = 8.9e-47
Identities = 9/29 (31%), Positives = 11/29 (37%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCPLGFTG 75
C C G C G + C CP +G
Sbjct: 459 CRGVQCPFGAMCAVKNGEAECACPKACSG 487
Score = 55 (24.4 bits), Expect = 8.9e-47, Sum P(3) = 8.9e-47
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 36 KGRSKECL-EDKCNKTPCEHGGKCITTPGSSYCLC 69
K RS +C D+C + PC C++ G C C
Sbjct: 374 KVRSGQCQPRDQCPE-PCRFNAVCLSRRGRPRCSC 407
Score = 54 (24.1 bits), Expect = 5.9e-39, Sum P(4) = 5.9e-39
Identities = 21/71 (29%), Positives = 31/71 (43%)
Query: 437 LHRTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVEDIEELTRSKYHHS-FKGWI 495
L R G++ +R+ + S LN L+VGG D +L R+ S F G I
Sbjct: 1716 LERNGRKGAMRVGDGPRVLGESPVPHTVLNLKEPLFVGGAPDFSKLARAAAVSSGFDGAI 1775
Query: 496 SNLILSNDYQV 506
L+ N Q+
Sbjct: 1776 Q-LVSLNGRQL 1785
>UNIPROTKB|F1NWQ6 [details] [associations]
symbol:AGRN "Agrin" species:9031 "Gallus gallus"
[GO:0007213 "G-protein coupled acetylcholine receptor signaling
pathway" evidence=IEA] [GO:0043236 "laminin binding" evidence=IEA]
[GO:0005605 "basal lamina" evidence=IEA] [GO:0043113 "receptor
clustering" evidence=IEA] InterPro:IPR000742 InterPro:IPR002350
InterPro:IPR004850 Pfam:PF00008 Pfam:PF00050 Pfam:PF03146
Pfam:PF07648 PROSITE:PS50026 PROSITE:PS51121 SMART:SM00181
SMART:SM00280 InterPro:IPR000152 GO:GO:0005615 GO:GO:0009986
GO:GO:0043525 GO:GO:0045944 GO:GO:0007009 GO:GO:0045202
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005605
GO:GO:0043113 GO:GO:0007213 PROSITE:PS01186 GO:GO:0030548
GO:GO:2000541 GO:GO:0032314 InterPro:IPR002049 InterPro:IPR003645
InterPro:IPR001791 InterPro:IPR000082 InterPro:IPR008993
Pfam:PF00053 Pfam:PF00054 Pfam:PF01390 SMART:SM00180 SMART:SM00274
SMART:SM00282 SMART:SM00200 SUPFAM:SSF50242 PROSITE:PS00010
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 PROSITE:PS50024
OMA:TNRWLRV GO:GO:0001934 InterPro:IPR011497
GeneTree:ENSGT00530000063501 EMBL:AADN02040845 EMBL:AADN02040846
EMBL:AADN02040847 EMBL:AADN02040848 EMBL:AADN02040849
EMBL:AADN02040850 EMBL:AADN02077829 IPI:IPI01017232
Ensembl:ENSGALT00000040179 Uniprot:F1NWQ6
Length = 1998
Score = 466 (169.1 bits), Expect = 4.1e-48, Sum P(2) = 4.1e-48
Identities = 117/387 (30%), Positives = 188/387 (48%)
Query: 42 CLEDK--CNKTPCEHGGKCITTP-GSSYCLCPLGFTGDLCQ--TRLDLQVP---QFNGSS 93
C +++ C+ TPC C+ P G + C CP+G G+ C+ T D +P +FNG S
Sbjct: 1531 CADERNPCDPTPCHISATCLVLPEGGAMCACPMGREGEFCERVTEQDHTMPFLPEFNGFS 1590
Query: 94 YLRYQGLGEQYLSLLD---LTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTF 150
YL GL L D + +VF A P+G++ YNG + DG GDF++L L+D Y+++ +
Sbjct: 1591 YLELNGLQTFVPDLQDKMSMEVVFLAKSPSGMIFYNGQKTDGKGDFVSLALHDGYLEYRY 1650
Query: 151 DLGTGAATL-RSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXX 209
DLG GAA L RS P+ L W + L R+GR ++++ SP P
Sbjct: 1651 DLGKGAAVLSRSKEPVPLNTWISVLLERSGRKGVMRINNGERVMGESPVPHAFLNLKEPF 1710
Query: 210 XXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNC--AHPCITQP 267
GG PD++ ++ I +SF G +Q++ I L + + I+ ++ AHPC +P
Sbjct: 1711 YVGGAPDFSKLARAAAISTSFYGAVQRISIKGVPL-LKEQHIRSAVEISTFRAHPCTQKP 1769
Query: 268 --C-GSGSCVPLYDGYKCVCTQSCKESHLTEVMCASFDHGASFLHYLDPEIIHSSGLLHY 324
C G+C P + Y+C C + +H +V+ + A D E I G +
Sbjct: 1770 NPCQNGGTCSPRLESYECACQRGFSGAHCEKVI---IEKAAG-----DAEAIAFDGRTYM 1821
Query: 325 KFQLHVDFRIT--GYEFN-IDMRIKTSSSSGLILWTGSS-QSKDFLALGIHNGYAHVMYX 380
++ V R + + N ++ IKT ++ GLILW+G + D++AL I +G+ +MY
Sbjct: 1822 EYHNAVTKRHSEKALQSNHFELSIKTEATQGLILWSGKGLERSDYIALAIVDGFVQMMYD 1881
Query: 381 XXXXXXXXXXXQTKINNGVWHRLTVHR 407
IN W + +R
Sbjct: 1882 LGSKPVVLRST-VPINTNHWTHIKAYR 1907
Score = 283 (104.7 bits), Expect = 1.9e-29, Sum P(4) = 1.9e-29
Identities = 76/250 (30%), Positives = 117/250 (46%)
Query: 47 CNKTPCEHGGKCITTPGSSY-CLCPLGFTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQYL 105
C+ PC HGG C G + C CP G G +C+ + +P F G SYL ++ + + Y
Sbjct: 1281 CDSHPCLHGGTC-EDDGKEFTCSCPAGKGGAVCEKPIRYFIPSFGGKSYLAFKMM-KAYH 1338
Query: 106 SLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSNPI 165
++ + + F+A E +G+LLYNG DFI+L L +V+ F+ G+G + S +
Sbjct: 1339 TVR-IAMEFRATELSGLLLYNGQNRGK--DFISLALVGGFVELRFNTGSGTGVITSKVRV 1395
Query: 166 SLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYN--IVSPK 223
G+WH+L + R R L VD P SP GG P+ +V+ +
Sbjct: 1396 EPGKWHQLVVNRNRRSGMLAVDGEPHVSGESPTGTDGLNLDTDLFVGGAPEDQMAVVAER 1455
Query: 224 VKIKSSFIGCIQKVLINN--HELNILG-EAIQGVNVVNCAH-PCITQPCGSGS-C-VPLY 277
GCI+ + +NN ++L G + + G V C + PC PC G C V
Sbjct: 1456 TAATVGLKGCIRLLDVNNQMYDLREKGSDVLYGSGVGECGNDPCHPNPCHHGGICHVKEA 1515
Query: 278 DGYKCVCTQS 287
+ + C C S
Sbjct: 1516 EMFHCECLHS 1525
Score = 203 (76.5 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 62/240 (25%), Positives = 109/240 (45%)
Query: 38 RSKECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRL------DLQVPQFNG 91
R+ C + K N PC++GG C S C C GF+G C+ + D + F+G
Sbjct: 1761 RAHPCTQ-KPN--PCQNGGTCSPRLESYECACQRGFSGAHCEKVIIEKAAGDAEAIAFDG 1817
Query: 92 SSYLRYQGL-----GEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYV 146
+Y+ Y E+ L + K G++L++G + D+IAL + D +V
Sbjct: 1818 RTYMEYHNAVTKRHSEKALQSNHFELSIKTEATQGLILWSGKGLER-SDYIALAIVDGFV 1876
Query: 147 DFTFDLGTGAATLRSSNPISLGEWHKLRLTR-TGRHAY----LQVDRFPSSQILSPGPFT 201
+DLG+ LRS+ PI+ W ++ R G + L D ++ GP
Sbjct: 1877 QMMYDLGSKPVVLRSTVPINTNHWTHIKAYRWEGGQEWGWGGLLWDGQAVTRGQEQGPQG 1936
Query: 202 QXXXXXXXXXGGVPDYNIVSPKVKIKSS-FIGCIQKVLINNHELNILGEAIQGVNVVNCA 260
GG+ ++ K S+ FIGCI+ V+++ EL+++ +A+ +++C+
Sbjct: 1937 SLPSLGALWLGGMERLSVAHKLPKAYSTGFIGCIRDVIVDRQELHLVEDALNNPTILHCS 1996
Score = 110 (43.8 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 38/160 (23%), Positives = 68/160 (42%)
Query: 265 TQPCGSGSCVPLYDGYKCVCTQSCKESHLTEVMCASFDHGASF---LHYLDPEIIHSSGL 321
++PC S C L+ G C KE + C + GA + Y P G
Sbjct: 1278 SRPCDSHPC--LHGG---TCEDDGKEFTCS---CPAGKGGAVCEKPIRYFIPSF---GGK 1326
Query: 322 LHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXX 381
+ F++ + + I M + + SGL+L+ G ++ KDF++L + G+ + +
Sbjct: 1327 SYLAFKMMKAY----HTVRIAMEFRATELSGLLLYNGQNRGKDFISLALVGGFVELRFNT 1382
Query: 382 XXXXXXXXXXQTKINNGVWHRLTVHRNF---MVVMHGSSH 418
+ ++ G WH+L V+RN M+ + G H
Sbjct: 1383 GSGTGVITS-KVRVEPGKWHQLVVNRNRRSGMLAVDGEPH 1421
Score = 93 (37.8 bits), Expect = 1.9e-29, Sum P(4) = 1.9e-29
Identities = 41/168 (24%), Positives = 66/168 (39%)
Query: 249 EAIQGVNVVNCA---HPCITQPCG-SGSCVPLYDG-YKCVCTQSCKESHLTEVMCASFDH 303
E + CA +PC PC S +C+ L +G C C +E E + DH
Sbjct: 1521 ECLHSYTGPTCADERNPCDPTPCHISATCLVLPEGGAMCACPMG-REGEFCERVTEQ-DH 1578
Query: 304 GASFLHYLDPEIIHSSGLLHYKFQLHV-DFRITGYEFNIDMRIKTSSSSGLILWTGS-SQ 361
FL PE S L Q V D + + ++++ S SG+I + G +
Sbjct: 1579 TMPFL----PEFNGFSYLELNGLQTFVPDLQD---KMSMEVVFLAKSPSGMIFYNGQKTD 1631
Query: 362 SK-DFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGVWHRLTVHRN 408
K DF++L +H+GY Y + + W + + R+
Sbjct: 1632 GKGDFVSLALHDGYLEYRYDLGKGAAVLSRSKEPVPLNTWISVLLERS 1679
Score = 84 (34.6 bits), Expect = 4.1e-48, Sum P(2) = 4.1e-48
Identities = 15/39 (38%), Positives = 18/39 (46%)
Query: 41 ECLEDKCNKTPCEHGGKCITTPGSSY-CLCPLGFTGDLC 78
EC D C+ PC HGG C + C C +TG C
Sbjct: 1493 ECGNDPCHPNPCHHGGICHVKEAEMFHCECLHSYTGPTC 1531
Score = 68 (29.0 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 16/58 (27%), Positives = 27/58 (46%)
Query: 28 QLNDGNKI--KGRSKECLEDK-CNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRL 82
Q +G+K+ G K+ K C + CE G C+ G ++C CP + T++
Sbjct: 812 QCPNGSKMGMAGCEKDPSAPKSCEEMSCEFGATCVEVNGFAHCECPSPLCSEANMTKV 869
Score = 66 (28.3 bits), Expect = 3.2e-46, Sum P(2) = 3.2e-46
Identities = 17/52 (32%), Positives = 26/52 (50%)
Query: 28 QLNDGNKIKGRSK-EC-LEDKCNKTPCEHGGKCI-TTPG-SSYCLCPLGFTG 75
Q N +IK SK C +D C + C G C+ + G ++ C+CP +G
Sbjct: 161 QCNQQRRIKVISKGPCGSKDPCAEVTCSFGSTCVRSADGQTARCVCPASCSG 212
Score = 62 (26.9 bits), Expect = 1.9e-29, Sum P(4) = 1.9e-29
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 36 KGRSKECL-EDKCNKTPCEHGGKCITTPGSSYCLC 69
K RS +C +DKC K C+ C+ G++ C C
Sbjct: 317 KVRSGQCQHQDKC-KDECKFNAVCLNRRGTARCSC 350
Score = 62 (26.9 bits), Expect = 1.9e-29, Sum P(4) = 1.9e-29
Identities = 18/63 (28%), Positives = 29/63 (46%)
Query: 437 LHRTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVEDIEELTRSK-YHHSFKGWI 495
L R+G++ ++RI+ + S LN YVGG D +L R+ SF G +
Sbjct: 1676 LERSGRKGVMRINNGERVMGESPVPHAFLNLKEPFYVGGAPDFSKLARAAAISTSFYGAV 1735
Query: 496 SNL 498
+
Sbjct: 1736 QRI 1738
Score = 49 (22.3 bits), Expect = 0.00022, Sum P(3) = 0.00022
Identities = 22/80 (27%), Positives = 38/80 (47%)
Query: 432 LSIQRLHRTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGV-EDIEELT--RSKYH 488
L + R R+G ++ +D + + S + LN D+ L+VGG ED + R+
Sbjct: 1403 LVVNRNRRSG---MLAVDGEPHVSGESPTGTDGLNLDTDLFVGGAPEDQMAVVAERTAAT 1459
Query: 489 HSFKGWISNLILSND-YQVK 507
KG I L ++N Y ++
Sbjct: 1460 VGLKGCIRLLDVNNQMYDLR 1479
Score = 48 (22.0 bits), Expect = 5.2e-28, Sum P(4) = 5.2e-28
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 48 NKTPCEHGGKC----ITTPGSSYCLCP 70
+K PC+ GKC I + C+CP
Sbjct: 465 HKGPCDRCGKCQFGAICEAETGRCVCP 491
Score = 47 (21.6 bits), Expect = 6.6e-28, Sum P(4) = 6.6e-28
Identities = 8/24 (33%), Positives = 10/24 (41%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCP 70
C T C G C+ C+CP
Sbjct: 537 CGSTVCSFGSTCV----GGQCVCP 556
Score = 44 (20.5 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 10/37 (27%), Positives = 20/37 (54%)
Query: 3 KSDNQVILDDWNTVRVFRHRWDAWIQLNDGNKIKGRS 39
+S V L+ W +V + R +++N+G ++ G S
Sbjct: 1661 RSKEPVPLNTWISVLLERSGRKGVMRINNGERVMGES 1697
Score = 40 (19.1 bits), Expect = 3.4e-27, Sum P(4) = 3.4e-27
Identities = 10/42 (23%), Positives = 15/42 (35%)
Query: 28 QLNDGNKIKGRSKECLEDKCNKTPCEHGGKCITTPGSSYCLC 69
+ G G EC +D+C +GG C+C
Sbjct: 602 ECGSGGSGSGDGSECEQDRCR----HYGGWWDEDAEDDRCVC 639
>UNIPROTKB|F1P3E3 [details] [associations]
symbol:AGRN "Agrin" species:9031 "Gallus gallus"
[GO:0005605 "basal lamina" evidence=IEA] [GO:0007213 "G-protein
coupled acetylcholine receptor signaling pathway" evidence=IEA]
[GO:0043113 "receptor clustering" evidence=IEA] [GO:0043236
"laminin binding" evidence=IEA] InterPro:IPR000742
InterPro:IPR002350 InterPro:IPR004850 Pfam:PF00008 Pfam:PF00050
Pfam:PF03146 Pfam:PF07648 PROSITE:PS50026 PROSITE:PS51121
SMART:SM00181 SMART:SM00280 InterPro:IPR000152 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005605 GO:GO:0043113
GO:GO:0007213 PROSITE:PS01186 IPI:IPI00603573 InterPro:IPR002049
InterPro:IPR003645 InterPro:IPR001791 InterPro:IPR000082
InterPro:IPR008993 Pfam:PF00053 Pfam:PF00054 Pfam:PF01390
SMART:SM00180 SMART:SM00274 SMART:SM00282 SMART:SM00200
SUPFAM:SSF50242 PROSITE:PS00010 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 PROSITE:PS50024 InterPro:IPR011497
GeneTree:ENSGT00530000063501 EMBL:AADN02040845 EMBL:AADN02040846
EMBL:AADN02040847 EMBL:AADN02040848 EMBL:AADN02040849
EMBL:AADN02040850 EMBL:AADN02077829 Ensembl:ENSGALT00000003171
Uniprot:F1P3E3
Length = 1952
Score = 445 (161.7 bits), Expect = 6.5e-46, Sum P(2) = 6.5e-46
Identities = 116/399 (29%), Positives = 190/399 (47%)
Query: 42 CLEDK--CNKTPCEHGGKCITTP-GSSYCLCPLGFTGDLCQ--TRLDLQVP---QFNGSS 93
C +++ C+ TPC C+ P G + C CP+G G+ C+ T D +P +FNG S
Sbjct: 1479 CADERNPCDPTPCHISATCLVLPEGGAMCACPMGREGEFCERVTEQDHTMPFLPEFNGFS 1538
Query: 94 YLRYQGLGEQYLSL----LDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFT 149
YL GL + +L+ + + +VF A P+G++ YNG + DG GDF++L L+D Y+++
Sbjct: 1539 YLELNGL-QTFLTCSKDKMSMEVVFLAKSPSGMIFYNGQKTDGKGDFVSLALHDGYLEYR 1597
Query: 150 FDLGTGAATLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPG----PFTQXXX 205
+DLG GAA LRS P+ L W + L R+GR ++++ SP P
Sbjct: 1598 YDLGKGAAVLRSKEPVPLNTWISVLLERSGRKGVMRINNGERVMGESPKSRKVPHAFLNL 1657
Query: 206 XXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNC--AHPC 263
GG PD++ ++ I +SF G +Q++ I L + + I+ ++ AHPC
Sbjct: 1658 KEPFYVGGAPDFSKLARAAAISTSFYGAVQRISIKGVPL-LKEQHIRSAVEISTFRAHPC 1716
Query: 264 ITQP--C-GSGSCVPLYDGYKCVCTQSCKESHLTEVMCASFDHGASFLHYLDPEIIHSSG 320
+P C G+C P + Y+C C + +H +V+ + A D E I G
Sbjct: 1717 TQKPNPCQNGGTCSPRLESYECACQRGFSGAHCEKVI---IEKAAG-----DAEAIAFDG 1768
Query: 321 LLHYKFQLHVDFRITG----------YEFN-IDMRIKTSSSSGLILWTGSS-QSKDFLAL 368
+ ++ V R + N ++ IKT ++ GLILW+G + D++AL
Sbjct: 1769 RTYMEYHNAVTKRSPSPATSPPDEKALQSNHFELSIKTEATQGLILWSGKGLERSDYIAL 1828
Query: 369 GIHNGYAHVMYXXXXXXXXXXXXQTKINNGVWHRLTVHR 407
I +G+ +MY IN W + +R
Sbjct: 1829 AIVDGFVQMMYDLGSKPVVLRST-VPINTNHWTHIKAYR 1866
Score = 283 (104.7 bits), Expect = 2.5e-23, Sum P(3) = 2.5e-23
Identities = 76/250 (30%), Positives = 117/250 (46%)
Query: 47 CNKTPCEHGGKCITTPGSSY-CLCPLGFTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQYL 105
C+ PC HGG C G + C CP G G +C+ + +P F G SYL ++ + + Y
Sbjct: 1229 CDSHPCLHGGTC-EDDGKEFTCSCPAGKGGAVCEKPIRYFIPSFGGKSYLAFKMM-KAYH 1286
Query: 106 SLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSNPI 165
++ + + F+A E +G+LLYNG DFI+L L +V+ F+ G+G + S +
Sbjct: 1287 TVR-IAMEFRATELSGLLLYNGQNRGK--DFISLALVGGFVELRFNTGSGTGVITSKVRV 1343
Query: 166 SLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYN--IVSPK 223
G+WH+L + R R L VD P SP GG P+ +V+ +
Sbjct: 1344 EPGKWHQLVVNRNRRSGMLAVDGEPHVSGESPTGTDGLNLDTDLFVGGAPEDQMAVVAER 1403
Query: 224 VKIKSSFIGCIQKVLINN--HELNILG-EAIQGVNVVNCAH-PCITQPCGSGS-C-VPLY 277
GCI+ + +NN ++L G + + G V C + PC PC G C V
Sbjct: 1404 TAATVGLKGCIRLLDVNNQMYDLREKGSDVLYGSGVGECGNDPCHPNPCHHGGICHVKEA 1463
Query: 278 DGYKCVCTQS 287
+ + C C S
Sbjct: 1464 EMFHCECLHS 1473
Score = 141 (54.7 bits), Expect = 5.5e-09, Sum P(2) = 5.5e-09
Identities = 40/154 (25%), Positives = 77/154 (50%)
Query: 109 DLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSNPISLG 168
+L+I +A + G++L++G + D+IAL + D +V +DLG+ LRS+ PI+
Sbjct: 1801 ELSIKTEATQ--GLILWSGKGLER-SDYIALAIVDGFVQMMYDLGSKPVVLRSTVPINTN 1857
Query: 169 EWHKLRLTR-TGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSPKVKIK 227
W ++ R G R ++ G Q GG+ ++ K
Sbjct: 1858 HWTHIKAYRWEGGQDGDTGSRARPPRVTPLGT-AQEDVESRNGLGGMERLSVAHKLPKAY 1916
Query: 228 SS-FIGCIQKVLINNHELNILGEAIQGVNVVNCA 260
S+ FIGCI+ V+++ EL+++ +A+ +++C+
Sbjct: 1917 STGFIGCIRDVIVDRQELHLVEDALNNPTILHCS 1950
Score = 110 (43.8 bits), Expect = 6.6e-05, Sum P(3) = 6.6e-05
Identities = 38/160 (23%), Positives = 68/160 (42%)
Query: 265 TQPCGSGSCVPLYDGYKCVCTQSCKESHLTEVMCASFDHGASF---LHYLDPEIIHSSGL 321
++PC S C L+ G C KE + C + GA + Y P G
Sbjct: 1226 SRPCDSHPC--LHGG---TCEDDGKEFTCS---CPAGKGGAVCEKPIRYFIPSF---GGK 1274
Query: 322 LHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXX 381
+ F++ + + I M + + SGL+L+ G ++ KDF++L + G+ + +
Sbjct: 1275 SYLAFKMMKAY----HTVRIAMEFRATELSGLLLYNGQNRGKDFISLALVGGFVELRFNT 1330
Query: 382 XXXXXXXXXXQTKINNGVWHRLTVHRNF---MVVMHGSSH 418
+ ++ G WH+L V+RN M+ + G H
Sbjct: 1331 GSGTGVITS-KVRVEPGKWHQLVVNRNRRSGMLAVDGEPH 1369
Score = 84 (34.6 bits), Expect = 6.5e-46, Sum P(2) = 6.5e-46
Identities = 15/39 (38%), Positives = 18/39 (46%)
Query: 41 ECLEDKCNKTPCEHGGKCITTPGSSY-CLCPLGFTGDLC 78
EC D C+ PC HGG C + C C +TG C
Sbjct: 1441 ECGNDPCHPNPCHHGGICHVKEAEMFHCECLHSYTGPTC 1479
Score = 68 (29.0 bits), Expect = 6.6e-05, Sum P(3) = 6.6e-05
Identities = 16/58 (27%), Positives = 27/58 (46%)
Query: 28 QLNDGNKI--KGRSKECLEDK-CNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRL 82
Q +G+K+ G K+ K C + CE G C+ G ++C CP + T++
Sbjct: 762 QCPNGSKMGMAGCEKDPSAPKSCEEMSCEFGATCVEVNGFAHCECPSPLCSEANMTKV 819
Score = 66 (28.3 bits), Expect = 5.0e-44, Sum P(2) = 5.0e-44
Identities = 17/52 (32%), Positives = 26/52 (50%)
Query: 28 QLNDGNKIKGRSK-EC-LEDKCNKTPCEHGGKCI-TTPG-SSYCLCPLGFTG 75
Q N +IK SK C +D C + C G C+ + G ++ C+CP +G
Sbjct: 111 QCNQQRRIKVISKGPCGSKDPCAEVTCSFGSTCVRSADGQTARCVCPASCSG 162
Score = 62 (26.9 bits), Expect = 2.5e-23, Sum P(3) = 2.5e-23
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 36 KGRSKECL-EDKCNKTPCEHGGKCITTPGSSYCLC 69
K RS +C +DKC K C+ C+ G++ C C
Sbjct: 267 KVRSGQCQHQDKC-KDECKFNAVCLNRRGTARCSC 300
Score = 54 (24.1 bits), Expect = 2.5e-23, Sum P(3) = 2.5e-23
Identities = 19/67 (28%), Positives = 31/67 (46%)
Query: 437 LHRTGKQCLIRIDTDYSM--QSISGGKFEQ--LNTDSGLYVGGVEDIEELTRSK-YHHSF 491
L R+G++ ++RI+ + +S K LN YVGG D +L R+ SF
Sbjct: 1623 LERSGRKGVMRINNGERVMGESPKSRKVPHAFLNLKEPFYVGGAPDFSKLARAAAISTSF 1682
Query: 492 KGWISNL 498
G + +
Sbjct: 1683 YGAVQRI 1689
Score = 49 (22.3 bits), Expect = 0.00021, Sum P(3) = 0.00021
Identities = 22/80 (27%), Positives = 38/80 (47%)
Query: 432 LSIQRLHRTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGV-EDIEELT--RSKYH 488
L + R R+G ++ +D + + S + LN D+ L+VGG ED + R+
Sbjct: 1351 LVVNRNRRSG---MLAVDGEPHVSGESPTGTDGLNLDTDLFVGGAPEDQMAVVAERTAAT 1407
Query: 489 HSFKGWISNLILSND-YQVK 507
KG I L ++N Y ++
Sbjct: 1408 VGLKGCIRLLDVNNQMYDLR 1427
Score = 48 (22.0 bits), Expect = 6.9e-22, Sum P(3) = 6.9e-22
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 48 NKTPCEHGGKC----ITTPGSSYCLCP 70
+K PC+ GKC I + C+CP
Sbjct: 415 HKGPCDRCGKCQFGAICEAETGRCVCP 441
Score = 47 (21.6 bits), Expect = 8.8e-22, Sum P(3) = 8.8e-22
Identities = 8/24 (33%), Positives = 10/24 (41%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCP 70
C T C G C+ C+CP
Sbjct: 487 CGSTVCSFGSTCV----GGQCVCP 506
Score = 46 (21.3 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 10/39 (25%), Positives = 22/39 (56%)
Query: 1 MVKSDNQVILDDWNTVRVFRHRWDAWIQLNDGNKIKGRS 39
+++S V L+ W +V + R +++N+G ++ G S
Sbjct: 1606 VLRSKEPVPLNTWISVLLERSGRKGVMRINNGERVMGES 1644
Score = 40 (19.1 bits), Expect = 4.6e-21, Sum P(3) = 4.6e-21
Identities = 10/42 (23%), Positives = 15/42 (35%)
Query: 28 QLNDGNKIKGRSKECLEDKCNKTPCEHGGKCITTPGSSYCLC 69
+ G G EC +D+C +GG C+C
Sbjct: 552 ECGSGGSGSGDGSECEQDRCR----HYGGWWDEDAEDDRCVC 589
>ZFIN|ZDB-GENE-030131-1033 [details] [associations]
symbol:agrn "agrin" species:7955 "Danio rerio"
[GO:0005605 "basal lamina" evidence=IEA] [GO:0043113 "receptor
clustering" evidence=IEA] [GO:0007213 "G-protein coupled
acetylcholine receptor signaling pathway" evidence=IEA] [GO:0043236
"laminin binding" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IMP] [GO:0007417 "central nervous system development"
evidence=IMP] [GO:0009952 "anterior/posterior pattern
specification" evidence=IMP] [GO:0007422 "peripheral nervous system
development" evidence=IMP] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR000742 InterPro:IPR002350
InterPro:IPR004850 Pfam:PF00008 Pfam:PF00050 Pfam:PF03146
Pfam:PF07648 PROSITE:PS50026 PROSITE:PS51121 SMART:SM00181
SMART:SM00280 ZFIN:ZDB-GENE-030131-1033 GO:GO:0009952 GO:GO:0007422
GO:GO:0007417 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0005605 GO:GO:0043113 GO:GO:0007213
GO:GO:0007409 PROSITE:PS01186 HOGENOM:HOG000033860
HOVERGEN:HBG080471 KO:K06254 InterPro:IPR002049 InterPro:IPR003645
InterPro:IPR001791 InterPro:IPR000082 InterPro:IPR008993
Pfam:PF00053 Pfam:PF00054 Pfam:PF01390 SMART:SM00180 SMART:SM00274
SMART:SM00282 SMART:SM00200 SUPFAM:SSF50242 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 PROSITE:PS50024 InterPro:IPR011497
EMBL:EU716327 IPI:IPI00897584 RefSeq:NP_001170923.1
UniGene:Dr.44162 ProteinModelPortal:B3GQ72 GeneID:565373
KEGG:dre:565373 eggNOG:NOG291045 NextBio:20885851 Uniprot:B3GQ72
Length = 2028
Score = 402 (146.6 bits), Expect = 4.1e-44, Sum P(3) = 4.1e-44
Identities = 106/386 (27%), Positives = 163/386 (42%)
Query: 33 NKIKGRSKECLEDKCNKTPCEHGGKCITTPGSSY-CLCPLGFTGDLCQTRLDLQ---VPQ 88
N G + + C+ C +C P Y C CP+G G C+ D +P
Sbjct: 1566 NGFSGPTCADAHNPCDPNKCHPPSRCQVLPEGGYKCECPMGREGRHCEKVSDKGGAFIPY 1625
Query: 89 FNGSSYLRYQGL---GEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRY 145
F G S+L +GL + +TIV A + G++ YNG + DG GDFI+L LND
Sbjct: 1626 FTGDSFLELKGLHTYNQDLRQKFSMTIVLLANDSKGMIFYNGQKTDGKGDFISLSLNDGI 1685
Query: 146 VDFTFDLGTGAATLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXX 205
++F +DLG G A +RS I L EW+ + L R R + ++ + +P T
Sbjct: 1686 LEFRYDLGKGPAVIRSKEKIKLNEWNTVNLERASRKGEISINGKDPVRGEAPNQHTDLNL 1745
Query: 206 XXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNV-VNCAHPCI 264
GG PD+ V+ K F G IQK+ + + A+ +V + HPC
Sbjct: 1746 KESLFVGGAPDFRKVARAAAFKDGFKGAIQKITLMGIPILKADNALSSTDVSMYPNHPCS 1805
Query: 265 TQPCGSGS-CVPLYDGYKCVCTQSCKESHLTEVMCASFDHGASFLHYLDPEIIHSSGLLH 323
C +G C P + Y+C C H + + F+ A D E I G
Sbjct: 1806 KDVCENGGRCNPQLNSYECACRHGFSGHHCQDTI---FEKSAG-----DTEAIAFDGHTF 1857
Query: 324 YKFQLHVDFRITGYEFN-IDMRIKTSSSSGLILWTGSS-QSKDFLALGIHNGYAHVMYXX 381
++ V N ++ I+T ++ GLILW+G + D++AL I +G + Y
Sbjct: 1858 IEYHNGVTKSEKALLVNKFELSIRTEATHGLILWSGKGVERSDYIALAIVDGRVQMTYDL 1917
Query: 382 XXXXXXXXXXQTKINNGVWHRLTVHR 407
++N W R+ R
Sbjct: 1918 GSKPVVLRST-VRVNTNHWIRIKASR 1942
Score = 334 (122.6 bits), Expect = 2.1e-33, Sum P(3) = 2.1e-33
Identities = 80/259 (30%), Positives = 130/259 (50%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQYLS 106
C+ PC HGG C C+CP G G +C+ + +P F G SY+ +Q + + Y +
Sbjct: 1323 CDSQPCRHGGTCEEDDNDFTCICPAGRGGAVCEKVIKYFIPSFGGKSYMAFQTM-KAYHT 1381
Query: 107 LLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSNPIS 166
+ + + F+A E GILLY+G ++ DF++L L + YV+ F+ G+G A++ S +
Sbjct: 1382 VR-IAMEFRASEMTGILLYDGQKSKK--DFLSLTLIEGYVELRFNTGSGTASVISKVLVK 1438
Query: 167 LGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGV-PDYNI-VSPKV 224
G WH+L + R R+A L VD PS + SP GGV D + V +
Sbjct: 1439 PGRWHQLVVVRNRRNAMLSVDNEPSVEGQSPPGTDGLNLDTDLFIGGVLDDMSADVKERT 1498
Query: 225 KIKSSFIGCIQKVLINNHELNIL---GEAIQGVNVVNCAH-PCITQPCGSG-SC-VPLYD 278
+ + +GCI+ + +NN N+ G + G + C + PC+ PC +G SC V +
Sbjct: 1499 SVSAGLVGCIRMLDVNNLVYNLQENGGSVLYGSAIGECGNNPCLPNPCKNGASCQVKEAE 1558
Query: 279 GYKCVCTQ-----SCKESH 292
+ C C +C ++H
Sbjct: 1559 IFHCKCVNGFSGPTCADAH 1577
Score = 241 (89.9 bits), Expect = 8.9e-18, Sum P(2) = 8.9e-18
Identities = 61/224 (27%), Positives = 112/224 (50%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRL------DLQVPQFNGSSYLRYQ-G 99
C+K CE+GG+C S C C GF+G CQ + D + F+G +++ Y G
Sbjct: 1804 CSKDVCENGGRCNPQLNSYECACRHGFSGHHCQDTIFEKSAGDTEAIAFDGHTFIEYHNG 1863
Query: 100 LGEQYLSLL--DLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAA 157
+ + +LL + + +G++L++G + D+IAL + D V T+DLG+
Sbjct: 1864 VTKSEKALLVNKFELSIRTEATHGLILWSGKGVER-SDYIALAIVDGRVQMTYDLGSKPV 1922
Query: 158 TLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDY 217
LRS+ ++ W +++ +R R LQV + SP TQ GG+ +
Sbjct: 1923 VLRSTVRVNTNHWIRIKASRALRDGSLQVGNEAAVTGSSPLAATQLDTDGALWLGGLEEL 1982
Query: 218 NIVSPKVKIKSS-FIGCIQKVLINNHELNILGEAIQGVNVVNCA 260
++ K S+ FIGC++ V+++ EL+++ +A+ + +C+
Sbjct: 1983 SVARRLPKAYSTGFIGCVKDVIVDGVELHLVEDALNTPKISHCS 2026
Score = 100 (40.3 bits), Expect = 2.7e-05, Sum P(3) = 2.7e-05
Identities = 38/158 (24%), Positives = 63/158 (39%)
Query: 254 VNVVNCAHPCITQPCGSGSCVPLYDGYKCVCTQSCKESHLTEVMCASFDHGA---SFLHY 310
V+++N P PC S C + G C + ++ T +C + GA + Y
Sbjct: 1309 VSLMNRLGPHAHSPCDSQPC--RHGG---TCEED--DNDFT-CICPAGRGGAVCEKVIKY 1360
Query: 311 LDPEIIHSSGLLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGI 370
P G + FQ + + I M + S +G++L+ G KDFL+L +
Sbjct: 1361 FIPSF---GGKSYMAFQTMKAY----HTVRIAMEFRASEMTGILLYDGQKSKKDFLSLTL 1413
Query: 371 HNGYAHVMYXXXXXXXXXXXXQTKINNGVWHRLTVHRN 408
GY + + + + G WH+L V RN
Sbjct: 1414 IEGYVELRFNTGSGTASVIS-KVLVKPGRWHQLVVVRN 1450
Score = 77 (32.2 bits), Expect = 4.1e-44, Sum P(3) = 4.1e-44
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 28 QLNDGNKIKGRSK-EC-LEDKCNKTPCEHGGKCI-TTPG-SSYCLCPL 71
Q N +IK K C L+D C++ C G CI ++ G S+ C+CPL
Sbjct: 224 QCNTQRRIKVMRKGPCALKDPCSEVTCSFGSTCIQSSDGLSAKCMCPL 271
Score = 76 (31.8 bits), Expect = 2.1e-33, Sum P(3) = 2.1e-33
Identities = 23/88 (26%), Positives = 43/88 (48%)
Query: 415 GSSHTRSNKSSKI-EFKCLSIQRLHRTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYV 473
G + RS + K+ E+ ++++R R G+ I I+ ++ + + LN L+V
Sbjct: 1695 GPAVIRSKEKIKLNEWNTVNLERASRKGE---ISINGKDPVRGEAPNQHTDLNLKESLFV 1751
Query: 474 GGVEDIEELTRSK-YHHSFKGWISNLIL 500
GG D ++ R+ + FKG I + L
Sbjct: 1752 GGAPDFRKVARAAAFKDGFKGAIQKITL 1779
Score = 64 (27.6 bits), Expect = 9.3e-43, Sum P(3) = 9.3e-43
Identities = 14/43 (32%), Positives = 20/43 (46%)
Query: 31 DGNK--IKGRSKECLEDK-CNKTPCEHGGKCITTPGSSYCLCP 70
DG+K + G K K C + C G C+ G ++C CP
Sbjct: 880 DGSKMGVNGCDKGPKAPKSCAELVCHFGSSCVEVNGQAHCECP 922
Score = 60 (26.2 bits), Expect = 4.1e-44, Sum P(3) = 4.1e-44
Identities = 13/39 (33%), Positives = 23/39 (58%)
Query: 464 QLNTDSGLYVGGVEDIEELTR--SKYHHSFKGWISNLIL 500
QL+TD L++GG+E++ R Y F G + ++I+
Sbjct: 1967 QLDTDGALWLGGLEELSVARRLPKAYSTGFIGCVKDVIV 2005
Score = 60 (26.2 bits), Expect = 2.7e-05, Sum P(3) = 2.7e-05
Identities = 12/40 (30%), Positives = 23/40 (57%)
Query: 439 RTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVED 478
R + ++ +D + S++ S + LN D+ L++GGV D
Sbjct: 1449 RNRRNAMLSVDNEPSVEGQSPPGTDGLNLDTDLFIGGVLD 1488
Score = 58 (25.5 bits), Expect = 3.9e-42, Sum P(3) = 3.9e-42
Identities = 10/27 (37%), Positives = 12/27 (44%)
Query: 43 LEDKCNKTPCEHGGKCITTPGSSYCLC 69
LE C K CE G C+ + C C
Sbjct: 462 LESPCLKKTCEFGALCVVKNSEAVCEC 488
Score = 40 (19.1 bits), Expect = 2.9e-40, Sum P(3) = 2.9e-40
Identities = 7/27 (25%), Positives = 18/27 (66%)
Query: 13 WNTVRVFRHRWDAWIQLNDGNKIKGRS 39
W+ + V R+R +A + +++ ++G+S
Sbjct: 1442 WHQLVVVRNRRNAMLSVDNEPSVEGQS 1468
Score = 39 (18.8 bits), Expect = 3.7e-40, Sum P(3) = 3.7e-40
Identities = 7/19 (36%), Positives = 9/19 (47%)
Query: 41 ECLEDKCNKTPCEHGGKCI 59
EC C T C G +C+
Sbjct: 598 EC--KTCGSTVCSWGSQCV 614
>UNIPROTKB|P31696 [details] [associations]
symbol:AGRN "Agrin" species:9031 "Gallus gallus"
[GO:0007213 "G-protein coupled acetylcholine receptor signaling
pathway" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007171 "activation of transmembrane receptor protein tyrosine
kinase activity" evidence=IDA] [GO:0035374 "chondroitin sulfate
binding" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0045202 "synapse" evidence=ISS] [GO:0045887 "positive
regulation of synaptic growth at neuromuscular junction"
evidence=ISS] [GO:0043236 "laminin binding" evidence=IDA]
[GO:0032321 "positive regulation of Rho GTPase activity"
evidence=ISS] [GO:0051491 "positive regulation of filopodium
assembly" evidence=ISS] [GO:0033691 "sialic acid binding"
evidence=IDA] [GO:0043395 "heparan sulfate proteoglycan binding"
evidence=IDA] [GO:0005509 "calcium ion binding" evidence=IDA]
[GO:0008201 "heparin binding" evidence=IDA] [GO:0002162
"dystroglycan binding" evidence=IDA] [GO:0043113 "receptor
clustering" evidence=ISS;IDA] [GO:0030548 "acetylcholine receptor
regulator activity" evidence=IDA] [GO:0030297 "transmembrane
receptor protein tyrosine kinase activator activity" evidence=IDA]
[GO:0005605 "basal lamina" evidence=ISS] InterPro:IPR000742
InterPro:IPR002350 InterPro:IPR004850 Pfam:PF00008 Pfam:PF00050
Pfam:PF03146 PROSITE:PS50026 PROSITE:PS51121 PROSITE:PS51465
SMART:SM00181 SMART:SM00280 InterPro:IPR000152 GO:GO:0007275
GO:GO:0005615 GO:GO:0009986 GO:GO:0030154 GO:GO:0043525
GO:GO:0045887 GO:GO:0045944 GO:GO:0007009 GO:GO:0008201
GO:GO:0045202 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0005605 GO:GO:0043236 GO:GO:0043113
GO:GO:0007213 PROSITE:PS01186 GO:GO:0033691 GO:GO:0002162
EMBL:U35613 EMBL:M94271 EMBL:M97371 EMBL:M97372 EMBL:U07271
IPI:IPI00579891 IPI:IPI00590466 IPI:IPI00592771 IPI:IPI00597536
IPI:IPI00603573 IPI:IPI00786263 PIR:JH0591 RefSeq:NP_990858.1
UniGene:Gga.4448 UniGene:Gga.48948 PDB:1JB3 PDB:1JC7 PDB:1PXU
PDB:1PZ7 PDB:1PZ8 PDB:1PZ9 PDB:1Q56 PDB:3I70 PDBsum:1JB3
PDBsum:1JC7 PDBsum:1PXU PDBsum:1PZ7 PDBsum:1PZ8 PDBsum:1PZ9
PDBsum:1Q56 PDBsum:3I70 ProteinModelPortal:P31696 SMR:P31696
IntAct:P31696 STRING:P31696 PRIDE:P31696 GeneID:396538
KEGG:gga:396538 CTD:375790 eggNOG:NOG312635 HOGENOM:HOG000033860
HOVERGEN:HBG080471 KO:K06254 OrthoDB:EOG4HQDHD
EvolutionaryTrace:P31696 NextBio:20816574 GO:GO:0030548
GO:GO:0035374 GO:GO:0043395 GO:GO:0030297 GO:GO:0051491
GO:GO:2000541 GO:GO:0032321 GO:GO:0032314 InterPro:IPR002049
InterPro:IPR003645 InterPro:IPR001791 InterPro:IPR000082
InterPro:IPR008993 Pfam:PF00053 Pfam:PF00054 Pfam:PF01390
SMART:SM00180 SMART:SM00274 SMART:SM00282 SMART:SM00200
SUPFAM:SSF50242 PROSITE:PS00010 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 PROSITE:PS50024 Uniprot:P31696
Length = 2081
Score = 400 (145.9 bits), Expect = 3.6e-39, Sum P(3) = 3.6e-39
Identities = 88/275 (32%), Positives = 143/275 (52%)
Query: 42 CLEDK--CNKTPCEHGGKCITTP-GSSYCLCPLGFTGDLCQ--TRLDLQVP---QFNGSS 93
C +++ C+ TPC C+ P G + C CP+G G+ C+ T D +P +FNG S
Sbjct: 1600 CADERNPCDPTPCHISATCLVLPEGGAMCACPMGREGEFCERVTEQDHTMPFLPEFNGFS 1659
Query: 94 YLRYQGLGEQYLSL--LDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFD 151
YL GL +L+ + + +VF A P+G++ YNG + DG GDF++L L+D Y+++ +D
Sbjct: 1660 YLELNGLQTLFLTCRQMSMEVVFLAKSPSGMIFYNGQKTDGKGDFVSLALHDGYLEYRYD 1719
Query: 152 LGTGAATLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPG----PFTQXXXXX 207
LG GAA LRS P+ L W + L R+GR ++++ SP P
Sbjct: 1720 LGKGAAVLRSKEPVPLNTWISVLLERSGRKGVMRINNGERVMGESPKSRKVPHAFLNLKE 1779
Query: 208 XXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNC--AHPCIT 265
GG PD++ ++ I +SF G +Q++ I L + + I+ ++ AHPC
Sbjct: 1780 PFYVGGAPDFSKLARAAAISTSFYGAVQRISIKGVPL-LKEQHIRSAVEISTFRAHPCTQ 1838
Query: 266 QP--C-GSGSCVPLYDGYKCVCTQSCKESHLTEVM 297
+P C G+C P + Y+C C + +H +V+
Sbjct: 1839 KPNPCQNGGTCSPRLESYECACQRGFSGAHCEKVI 1873
Score = 267 (99.0 bits), Expect = 6.3e-20, Sum P(3) = 6.3e-20
Identities = 75/250 (30%), Positives = 116/250 (46%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQYLS 106
C+ PC HGG C C CP G G +C+ + +P F G SYL ++ + + Y +
Sbjct: 1351 CDSHPCLHGGTCEDDGREFTCRCPAGKGGAVCEKPIRYFIPSFGGKSYLAFKMM-KAYHT 1409
Query: 107 LLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSNPIS 166
+ + + F+A E +G+LLYNG DFI+L L +V+ F+ G+G + S +
Sbjct: 1410 VR-IAMEFRATELSGLLLYNGQNRGK--DFISLALVGGFVELRFNTGSGTGVITSKVRVE 1466
Query: 167 LGEWHKLRLTRTGRHAYLQVD-RFPSSQILSPGPFTQXXXXXXXXXGGVPDYN--IVSPK 223
G+WH+L + R R L VD S + SP GG P+ +V+ +
Sbjct: 1467 PGKWHQLVVNRNRRSGMLAVDGEHVSGE--SPTGTDGLNLDTDLFVGGAPEDQMAVVAER 1524
Query: 224 VKIKSSFIGCIQKVLINN--HELNILG-EAIQGVNVVNCAH-PCITQPCGSG-SC-VPLY 277
G I+ + +NN ++L G + + G V C + PC PC G SC V
Sbjct: 1525 TAATVGLKGSIRLLDVNNQMYDLREKGSDVLYGSGVGECGNDPCHPNPCHHGASCHVKEA 1584
Query: 278 DGYKCVCTQS 287
+ + C C S
Sbjct: 1585 EMFHCECLHS 1594
Score = 173 (66.0 bits), Expect = 4.6e-12, Sum P(2) = 4.6e-12
Identities = 44/153 (28%), Positives = 79/153 (51%)
Query: 109 DLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSNPISLG 168
+L+I +A + G++L++G + D+IAL + D +V +DLG+ LRS+ PI+
Sbjct: 1930 ELSIKTEATQ--GLILWSGKGLER-SDYIALAIVDGFVQMMYDLGSKPVVLRSTVPINTN 1986
Query: 169 EWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSPKVKIKS 228
W ++ R R LQV SP TQ GG+ ++ K S
Sbjct: 1987 HWTHIKAYRVQREGSLQVGNEAPITGSSPLGATQLDTDGALWLGGMERLSVAHKLPKAYS 2046
Query: 229 S-FIGCIQKVLINNHELNILGEAIQGVNVVNCA 260
+ FIGCI+ V+++ EL+++ +A+ +++C+
Sbjct: 2047 TGFIGCIRDVIVDRQELHLVEDALNNPTILHCS 2079
Score = 171 (65.3 bits), Expect = 2.1e-12, Sum P(3) = 2.1e-12
Identities = 54/214 (25%), Positives = 92/214 (42%)
Query: 212 GGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNC-AHPCITQP--C 268
GG PD++ ++ I +SF G +Q++ I L V + AHPC +P C
Sbjct: 1784 GGAPDFSKLARAAAISTSFYGAVQRISIKGVPLLKEQHIRSAVEISTFRAHPCTQKPNPC 1843
Query: 269 -GSGSCVPLYDGYKCVCTQSCKESHLTEVM---------CASFDHGASFLHYLDPEI-IH 317
G+C P + Y+C C + +H +V+ +FD G +++ Y + H
Sbjct: 1844 QNGGTCSPRLESYECACQRGFSGAHCEKVIIEKAAGDAEAIAFD-GRTYMEYHNAVTKSH 1902
Query: 318 SSGLLHYKFQLHVDFRIT--GYEFN-IDMRIKTSSSSGLILWTGSS-QSKDFLALGIHNG 373
S + L + + N ++ IKT ++ GLILW+G + D++AL I +G
Sbjct: 1903 LSNEIPAPDALDYPAEPSEKALQSNHFELSIKTEATQGLILWSGKGLERSDYIALAIVDG 1962
Query: 374 YAHVMYXXXXXXXXXXXXQTKINNGVWHRLTVHR 407
+ +MY IN W + +R
Sbjct: 1963 FVQMMYDLGSKPVVLRST-VPINTNHWTHIKAYR 1995
Score = 106 (42.4 bits), Expect = 0.00017, Sum P(4) = 0.00017
Identities = 19/68 (27%), Positives = 36/68 (52%)
Query: 341 IDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGVW 400
I M + + SGL+L+ G ++ KDF++L + G+ + + + ++ G W
Sbjct: 1412 IAMEFRATELSGLLLYNGQNRGKDFISLALVGGFVELRFNTGSGTGVITS-KVRVEPGKW 1470
Query: 401 HRLTVHRN 408
H+L V+RN
Sbjct: 1471 HQLVVNRN 1478
Score = 98 (39.6 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 38/139 (27%), Positives = 61/139 (43%)
Query: 249 EAIQGVNVVNCA---HPCITQPCG-SGSCVPLYDG-YKCVCTQSCKESHLTEVMCASFDH 303
E + CA +PC PC S +C+ L +G C C +E E + DH
Sbjct: 1590 ECLHSYTGPTCADERNPCDPTPCHISATCLVLPEGGAMCACPMG-REGEFCERVTEQ-DH 1647
Query: 304 GASFLHYLDPEIIHSSGLLHYKFQ-LHVDFRITGYEFNIDMRIKTSSSSGLILWTGS-SQ 361
FL PE +G + + L F +T + ++++ S SG+I + G +
Sbjct: 1648 TMPFL----PEF---NGFSYLELNGLQTLF-LTCRQMSMEVVFLAKSPSGMIFYNGQKTD 1699
Query: 362 SK-DFLALGIHNGYAHVMY 379
K DF++L +H+GY Y
Sbjct: 1700 GKGDFVSLALHDGYLEYRY 1718
Score = 81 (33.6 bits), Expect = 2.1e-12, Sum P(3) = 2.1e-12
Identities = 14/39 (35%), Positives = 17/39 (43%)
Query: 41 ECLEDKCNKTPCEHGGKCITTPGSSY-CLCPLGFTGDLC 78
EC D C+ PC HG C + C C +TG C
Sbjct: 1562 ECGNDPCHPNPCHHGASCHVKEAEMFHCECLHSYTGPTC 1600
Score = 68 (29.0 bits), Expect = 4.3e-11, Sum P(3) = 4.3e-11
Identities = 16/58 (27%), Positives = 27/58 (46%)
Query: 28 QLNDGNKI--KGRSKECLEDK-CNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRL 82
Q +G+K+ G K+ K C + CE G C+ G ++C CP + T++
Sbjct: 879 QCPNGSKMGMAGCEKDPSAPKSCEEMSCEFGATCVEVNGFAHCECPSPLCSEANMTKV 936
Score = 65 (27.9 bits), Expect = 8.6e-11, Sum P(3) = 8.6e-11
Identities = 17/52 (32%), Positives = 25/52 (48%)
Query: 28 QLNDGNKIKGRSK-EC-LEDKCNKTPCEHGGKCI-TTPGSSY-CLCPLGFTG 75
Q N +IK SK C +D C + C G C+ + G + C+CP +G
Sbjct: 229 QCNQQRRIKVISKGPCGSKDPCAEVTCSFGSTCVRSADGQTAGCVCPASCSG 280
Score = 54 (24.1 bits), Expect = 6.3e-20, Sum P(3) = 6.3e-20
Identities = 19/67 (28%), Positives = 31/67 (46%)
Query: 437 LHRTGKQCLIRIDTDYSM--QSISGGKFEQ--LNTDSGLYVGGVEDIEELTRSK-YHHSF 491
L R+G++ ++RI+ + +S K LN YVGG D +L R+ SF
Sbjct: 1743 LERSGRKGVMRINNGERVMGESPKSRKVPHAFLNLKEPFYVGGAPDFSKLARAAAISTSF 1802
Query: 492 KGWISNL 498
G + +
Sbjct: 1803 YGAVQRI 1809
Score = 52 (23.4 bits), Expect = 3.6e-39, Sum P(3) = 3.6e-39
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 464 QLNTDSGLYVGGVEDIEELTR--SKYHHSFKGWISNLIL 500
QL+TD L++GG+E + + Y F G I ++I+
Sbjct: 2020 QLDTDGALWLGGMERLSVAHKLPKAYSTGFIGCIRDVIV 2058
Score = 49 (22.3 bits), Expect = 0.00034, Sum P(4) = 0.00034
Identities = 17/49 (34%), Positives = 29/49 (59%)
Query: 432 LSIQRLHRTGKQCLIRIDTDY-SMQSISGGKFEQLNTDSGLYVGGV-ED 478
L + R R+G ++ +D ++ S +S +G + LN D+ L+VGG ED
Sbjct: 1473 LVVNRNRRSG---MLAVDGEHVSGESPTGT--DGLNLDTDLFVGGAPED 1516
Score = 48 (22.0 bits), Expect = 6.3e-20, Sum P(3) = 6.3e-20
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 48 NKTPCEHGGKC----ITTPGSSYCLCP 70
+K PC+ GKC I + C+CP
Sbjct: 532 HKGPCDRCGKCQFGAICEAETGRCVCP 558
Score = 48 (22.0 bits), Expect = 0.00017, Sum P(4) = 0.00017
Identities = 13/34 (38%), Positives = 15/34 (44%)
Query: 253 GVNVVNCAHPCITQPCGS--GSCVPLYDGYKCVC 284
GV C C P GS G+C P G +C C
Sbjct: 783 GVGAAGCPSTCQCNPYGSYGGTCDPA-TG-QCSC 814
Score = 46 (21.3 bits), Expect = 1.6e-19, Sum P(3) = 1.6e-19
Identities = 8/24 (33%), Positives = 10/24 (41%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCP 70
C T C G C+ C+CP
Sbjct: 604 CGTTVCSFGSTCV----GGQCVCP 623
Score = 46 (21.3 bits), Expect = 7.1e-09, Sum P(3) = 7.1e-09
Identities = 10/39 (25%), Positives = 22/39 (56%)
Query: 1 MVKSDNQVILDDWNTVRVFRHRWDAWIQLNDGNKIKGRS 39
+++S V L+ W +V + R +++N+G ++ G S
Sbjct: 1726 VLRSKEPVPLNTWISVLLERSGRKGVMRINNGERVMGES 1764
Score = 42 (19.8 bits), Expect = 1.8e-08, Sum P(3) = 1.8e-08
Identities = 10/37 (27%), Positives = 12/37 (32%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLD 83
C C G C+ C C +CQ R D
Sbjct: 470 CLSVECTFGATCVVKNREPVCECQ-----QVCQGRYD 501
Score = 40 (19.1 bits), Expect = 3.6e-39, Sum P(3) = 3.6e-39
Identities = 10/42 (23%), Positives = 15/42 (35%)
Query: 28 QLNDGNKIKGRSKECLEDKCNKTPCEHGGKCITTPGSSYCLC 69
+ G G EC +D+C +GG C+C
Sbjct: 669 ECGSGGSGSGDGSECEQDRCR----HYGGWWDEDAEDDRCVC 706
>MGI|MGI:96257 [details] [associations]
symbol:Hspg2 "perlecan (heparan sulfate proteoglycan 2)"
species:10090 "Mus musculus" [GO:0001525 "angiogenesis"
evidence=IEA] [GO:0001958 "endochondral ossification" evidence=IMP]
[GO:0002062 "chondrocyte differentiation" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0005576 "extracellular region"
evidence=IEA] [GO:0005578 "proteinaceous extracellular matrix"
evidence=IDA] [GO:0005604 "basement membrane" evidence=IDA]
[GO:0005605 "basal lamina" evidence=IDA] [GO:0005615 "extracellular
space" evidence=ISO] [GO:0007420 "brain development" evidence=IMP]
[GO:0008022 "protein C-terminus binding" evidence=ISO] [GO:0008104
"protein localization" evidence=IMP] [GO:0030198 "extracellular
matrix organization" evidence=IMP] [GO:0031012 "extracellular
matrix" evidence=IDA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IMP]
[GO:0048738 "cardiac muscle tissue development" evidence=IMP]
[GO:0060351 "cartilage development involved in endochondral bone
morphogenesis" evidence=IMP] [GO:0070062 "extracellular vesicular
exosome" evidence=ISO] Reactome:REACT_112621 InterPro:IPR000742
InterPro:IPR002172 InterPro:IPR007110 Pfam:PF00008 Pfam:PF00057
PROSITE:PS50026 PROSITE:PS50068 PROSITE:PS50835 SMART:SM00181
SMART:SM00192 MGI:MGI:96257 GO:GO:0008104 GO:GO:0007420
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
GO:GO:0030198 GO:GO:0001525 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0048738 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005605 PROSITE:PS01186
Reactome:REACT_118324 Gene3D:4.10.400.10 InterPro:IPR023415
SUPFAM:SSF57424 PROSITE:PS01209 InterPro:IPR002049
InterPro:IPR001791 InterPro:IPR000082 Pfam:PF00053 Pfam:PF00054
SMART:SM00180 SMART:SM00282 SMART:SM00200 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 PROSITE:PS50024 GO:GO:0005796
InterPro:IPR013098 Pfam:PF07679 GO:GO:0048704 GO:GO:0002062
GO:GO:0001958 Pfam:PF02210 GO:GO:0060351 InterPro:IPR018031
InterPro:IPR000034 Pfam:PF00052 SMART:SM00281 PROSITE:PS51115
PDB:1GL4 PDBsum:1GL4 CTD:3339 eggNOG:NOG258321 HOGENOM:HOG000049276
HOVERGEN:HBG008174 KO:K06255 EMBL:M77174 EMBL:J04054 EMBL:J04055
IPI:IPI00113824 PIR:S18252 RefSeq:NP_032331.2 UniGene:Mm.273662
ProteinModelPortal:Q05793 SMR:Q05793 IntAct:Q05793 MINT:MINT-215413
STRING:Q05793 PhosphoSite:Q05793 PaxDb:Q05793 PRIDE:Q05793
GeneID:15530 KEGG:mmu:15530 EvolutionaryTrace:Q05793 NextBio:288458
CleanEx:MM_HSPG2 Genevestigator:Q05793
GermOnline:ENSMUSG00000028763 Uniprot:Q05793
Length = 3707
Score = 331 (121.6 bits), Expect = 1.6e-38, Sum P(3) = 1.6e-38
Identities = 81/252 (32%), Positives = 127/252 (50%)
Query: 47 CNKTPCEHG-GKCITTP-GSSY-CLCPLGFTGDLCQTRLDLQVPQFNGS-SYLRYQGLGE 102
C TP C+ P G Y C C LG +G C+ + + P +G+ SYL L
Sbjct: 3204 CTATPSLWADATCVNRPDGRGYTCRCHLGRSGVRCEEGVTVTTPSMSGAGSYLALPALTN 3263
Query: 103 QYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSS 162
+ L L + FK +EPNGILL++G ++ V DF++L + +++F ++LG+G A LRS
Sbjct: 3264 THHELR-LDVEFKPLEPNGILLFSGGKSGPVEDFVSLAMVGGHLEFRYELGSGLAVLRSH 3322
Query: 163 NPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSP 222
P++LG WH++ R + L+VD SPG GGV +SP
Sbjct: 3323 EPLALGRWHRVSAERLNKDGSLRVDGGRPVLRSSPGKSQGLNLHTLLYLGGVEPSVQLSP 3382
Query: 223 KVKIKSSFIGCIQKVLINNHELNILGEAI--QGVNVVNCAHPCITQPCGSGS-CVPL--Y 277
+ + F GC+ +V +N L++ + QGV + PC QPC +G+ C+P Y
Sbjct: 3383 ATNMSAHFHGCVGEVSVNGKRLDLTYSFLGSQGVGQCYDSSPCERQPCRNGATCMPAGEY 3442
Query: 278 DGYKCVCTQSCK 289
+ ++C+C K
Sbjct: 3443 E-FQCLCQDGFK 3453
Score = 217 (81.4 bits), Expect = 7.2e-26, Sum P(4) = 7.2e-26
Identities = 60/209 (28%), Positives = 94/209 (44%)
Query: 86 VPQFNGS--SYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHR------ADGVGDFI 137
+P F + S+L + + Y ++ I F+ +G+LLYNG + A+ DFI
Sbjct: 2984 IPYFTQTPYSFLPLPTIKDAYRKF-EIKITFRPDSADGMLLYNGQKRSPTNLANRQPDFI 3042
Query: 138 ALYLNDRYVDFTFDLGTGAATLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSP 197
+ L +F FD G+G AT+R P++LG++H + L R+ L V S
Sbjct: 3043 SFGLVGGRPEFRFDAGSGMATIRHPTPLALGQFHTVTLLRSLTQGSLIVGNLAPVNGTSQ 3102
Query: 198 GPFTQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVV 257
G F GG PDY + PK + S F+GC++++ I E+ + +
Sbjct: 3103 GKFQGLDLNEELYLGGYPDYGAI-PKAGLSSGFVGCVRELRIQGEEIVFHDVNLTTHGIS 3161
Query: 258 NCAHPCITQPC-GSGSCVPLYDG-YKCVC 284
+C C +PC G C Y CVC
Sbjct: 3162 HCP-TCQDRPCQNGGQCQDSESSSYTCVC 3189
Score = 184 (69.8 bits), Expect = 6.4e-10, P = 6.4e-10
Identities = 64/215 (29%), Positives = 100/215 (46%)
Query: 43 LEDKC-NKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQ------VP-QFNGSSY 94
L + C N C G +C+ PG S C G + ++ + P Q+ Y
Sbjct: 3466 LHEPCLNGGTCR-GARCLCLPGFSGPRCQQGAGYGVVESDWHPEGSGGNDAPGQYGAYFY 3524
Query: 95 LR-YQGL-GEQYL-SLLDL--TIVF--KAIEPNGILLYNG--HRADGVGDFIALYLNDRY 145
+ GL G + SL ++ TI F + +G+LL+ G A DFI+L L D +
Sbjct: 3525 DNGFLGLPGNSFSRSLPEVPETIEFEVRTSTADGLLLWQGVVREASRSKDFISLGLQDGH 3584
Query: 146 VDFTFDLGTGAATLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXX 205
+ F++ LG+G A L S +PI+ GEWH++ R G+ +QVD SPGP
Sbjct: 3585 LVFSYQLGSGEARLVSGDPINDGEWHRITALREGQRGSIQVDGEDLVTGRSPGPNVAVNT 3644
Query: 206 XXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLIN 240
GG PD ++ + K S GCI+ ++++
Sbjct: 3645 KDIIYIGGAPDVATLT-RGKFSSGITGCIKNLVLH 3678
Score = 120 (47.3 bits), Expect = 1.6e-38, Sum P(3) = 1.6e-38
Identities = 25/71 (35%), Positives = 40/71 (56%)
Query: 341 IDMRIKTSSSSGLILWTG----SSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTKIN 396
I+ ++TS++ GL+LW G +S+SKDF++LG+ +G+ Y IN
Sbjct: 3547 IEFEVRTSTADGLLLWQGVVREASRSKDFISLGLQDGHLVFSYQLGSGEARLVSGDP-IN 3605
Query: 397 NGVWHRLTVHR 407
+G WHR+T R
Sbjct: 3606 DGEWHRITALR 3616
Score = 95 (38.5 bits), Expect = 1.6e-38, Sum P(3) = 1.6e-38
Identities = 21/62 (33%), Positives = 33/62 (53%)
Query: 439 RTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVEDIEELTRSKYHHSFKGWISNL 498
R G++ I++D + + S G +NT +Y+GG D+ LTR K+ G I NL
Sbjct: 3616 REGQRGSIQVDGEDLVTGRSPGPNVAVNTKDIIYIGGAPDVATLTRGKFSSGITGCIKNL 3675
Query: 499 IL 500
+L
Sbjct: 3676 VL 3677
Score = 93 (37.8 bits), Expect = 9.9e-12, Sum P(3) = 9.9e-12
Identities = 21/60 (35%), Positives = 28/60 (46%)
Query: 41 ECLEDK-CNKTPCEHGGKCITTPGSSY---CLCPLGFTGDLCQTR---LDLQVPQFNGSS 93
+C + C + PC +G C+ P Y CLC GF GDLC+ L P NG +
Sbjct: 3418 QCYDSSPCERQPCRNGATCM--PAGEYEFQCLCQDGFKGDLCEHEENPCQLHEPCLNGGT 3475
Score = 92 (37.4 bits), Expect = 1.3e-11, Sum P(3) = 1.3e-11
Identities = 15/29 (51%), Positives = 20/29 (68%)
Query: 47 CNKTPCEHGGKCITTPGSSY-CLCPLGFT 74
C PC++GG+C + SSY C+CP GFT
Sbjct: 3166 CQDRPCQNGGQCQDSESSSYTCVCPAGFT 3194
Score = 77 (32.2 bits), Expect = 1.7e-21, Sum P(4) = 1.7e-21
Identities = 40/159 (25%), Positives = 62/159 (38%)
Query: 257 VNCAHPCITQPC--GSGSCVPLYDG--YKCVCTQSCKESHL--TEVMCASFDHGASFLHY 310
VN PC P +CV DG Y C C HL + V C + G +
Sbjct: 3198 VNIRKPCTATPSLWADATCVNRPDGRGYTCRC-------HLGRSGVRC---EEGVTVT-- 3245
Query: 311 LDPEIIHSSGLLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTG--SSQSKDFLAL 368
P + SG Y L T +E +D+ K +G++L++G S +DF++L
Sbjct: 3246 -TPSM---SGAGSY-LALPA-LTNTHHELRLDVEFKPLEPNGILLFSGGKSGPVEDFVSL 3299
Query: 369 GIHNGYAHVMYXXXXXXXXXXXXQTKINNGVWHRLTVHR 407
+ G+ Y + + G WHR++ R
Sbjct: 3300 AMVGGHLEFRYELGSGLAVLRSHEP-LALGRWHRVSAER 3337
Score = 69 (29.3 bits), Expect = 7.4e-19, Sum P(4) = 7.4e-19
Identities = 22/69 (31%), Positives = 36/69 (52%)
Query: 432 LSIQRLHRTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVEDIEELT----RSKY 487
+S +RL++ G +R+D + S GK + LN + LY+GGVE +L+ S +
Sbjct: 3333 VSAERLNKDGS---LRVDGGRPVLRSSPGKSQGLNLHTLLYLGGVEPSVQLSPATNMSAH 3389
Query: 488 HHSFKGWIS 496
H G +S
Sbjct: 3390 FHGCVGEVS 3398
Score = 54 (24.1 bits), Expect = 7.2e-26, Sum P(4) = 7.2e-26
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 67 CLCPLGFTGDLCQTRLDLQVPQFNGSSYL 95
C CP+G++G C++ D + G YL
Sbjct: 731 CRCPIGYSGLSCES-CDAHFTRVPGGPYL 758
Score = 52 (23.4 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
Identities = 13/33 (39%), Positives = 18/33 (54%)
Query: 268 CGSGSCVPLYDGYKCVCTQSCKESHLTEVMCAS 300
C SG C+P D Y C + C++ E+ CAS
Sbjct: 292 CHSGHCIPR-D-YLCDGQEDCRDGS-DELGCAS 321
Score = 46 (21.3 bits), Expect = 4.7e-25, Sum P(4) = 4.7e-25
Identities = 7/13 (53%), Positives = 8/13 (61%)
Query: 67 CLCPLGFTGDLCQ 79
C CP G+ G CQ
Sbjct: 1126 CTCPPGYRGPSCQ 1138
Score = 46 (21.3 bits), Expect = 4.7e-25, Sum P(4) = 4.7e-25
Identities = 14/52 (26%), Positives = 21/52 (40%)
Query: 32 GNKIKGRSKECLEDKCNKTPCEH--GGKCITTPGSSY-CL-CPLGFTGDLCQ 79
G+ G ++C C T E+ C + Y C C G+TG C+
Sbjct: 1600 GDATAGTPEDCQPCACPLTNPENMFSRTCESLGAGGYRCTACEPGYTGQYCE 1651
Score = 43 (20.2 bits), Expect = 9.5e-25, Sum P(4) = 9.5e-25
Identities = 7/13 (53%), Positives = 8/13 (61%)
Query: 67 CLCPLGFTGDLCQ 79
C CP G+ G CQ
Sbjct: 1530 CRCPPGYVGLSCQ 1542
Score = 42 (19.8 bits), Expect = 1.2e-24, Sum P(4) = 1.2e-24
Identities = 15/48 (31%), Positives = 20/48 (41%)
Query: 37 GRSKECLEDKCNKTPCEHGGKCI-TTPGSSYC--LCPLGFTGDLCQTR 81
GR E P + GGKC TT C LG +G+ C+ +
Sbjct: 848 GRRCESCAPGYEGNPIQPGGKCRPTTQEIVRCDERGSLGTSGETCRCK 895
>UNIPROTKB|P98160 [details] [associations]
symbol:HSPG2 "Basement membrane-specific heparan sulfate
proteoglycan core protein" species:9606 "Homo sapiens" [GO:0001525
"angiogenesis" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0001958 "endochondral ossification" evidence=IEA]
[GO:0002062 "chondrocyte differentiation" evidence=IEA] [GO:0005605
"basal lamina" evidence=IEA] [GO:0007420 "brain development"
evidence=IEA] [GO:0008104 "protein localization" evidence=IEA]
[GO:0030198 "extracellular matrix organization" evidence=IEA]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IEA]
[GO:0048738 "cardiac muscle tissue development" evidence=IEA]
[GO:0060351 "cartilage development involved in endochondral bone
morphogenesis" evidence=IEA] [GO:0008022 "protein C-terminus
binding" evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0070062 "extracellular vesicular exosome" evidence=IDA]
[GO:0005576 "extracellular region" evidence=TAS] [GO:0005796 "Golgi
lumen" evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0005975 "carbohydrate metabolic process" evidence=TAS]
[GO:0006024 "glycosaminoglycan biosynthetic process" evidence=TAS]
[GO:0006027 "glycosaminoglycan catabolic process" evidence=TAS]
[GO:0006629 "lipid metabolic process" evidence=TAS] [GO:0030203
"glycosaminoglycan metabolic process" evidence=TAS] [GO:0030204
"chondroitin sulfate metabolic process" evidence=TAS] [GO:0042157
"lipoprotein metabolic process" evidence=TAS] [GO:0043202
"lysosomal lumen" evidence=TAS] [GO:0044281 "small molecule
metabolic process" evidence=TAS] [GO:0005615 "extracellular space"
evidence=IDA] [GO:0031012 "extracellular matrix" evidence=ISS;IDA]
Reactome:REACT_111217 InterPro:IPR000742 InterPro:IPR002172
InterPro:IPR007110 Pfam:PF00008 Pfam:PF00057 PROSITE:PS50026
PROSITE:PS50068 PROSITE:PS50835 SMART:SM00181 SMART:SM00192
GO:GO:0005886 Reactome:REACT_116125 GO:GO:0005615 GO:GO:0008104
GO:GO:0007420 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872
GO:GO:0005975 GO:GO:0070062 InterPro:IPR003598 SMART:SM00408
DrugBank:DB00102 GO:GO:0006629 GO:GO:0030198 GO:GO:0001525
GO:GO:0042157 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0048738
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0005605 PROSITE:PS01186 Gene3D:4.10.400.10
InterPro:IPR023415 SUPFAM:SSF57424 PROSITE:PS01209 GO:GO:0043202
InterPro:IPR002049 InterPro:IPR001791 InterPro:IPR000082
Pfam:PF00053 Pfam:PF00054 SMART:SM00180 SMART:SM00282 SMART:SM00200
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 PROSITE:PS50024
GO:GO:0005796 GO:GO:0030204 GO:GO:0006024 GO:GO:0006027
InterPro:IPR013098 Pfam:PF07679 GO:GO:0048704 GO:GO:0002062
GO:GO:0001958 Pfam:PF02210 GO:GO:0060351 Pfam:PF12661 EMBL:AL590556
DrugBank:DB00039 InterPro:IPR018031 InterPro:IPR000034 Pfam:PF00052
SMART:SM00281 PROSITE:PS51115 EMBL:AL590103 EMBL:M85289 EMBL:X62515
EMBL:L22078 EMBL:AL445795 EMBL:S76436 EMBL:M64283 IPI:IPI00024284
PIR:A38096 RefSeq:NP_005520.4 UniGene:Hs.562227 PDB:3SH4 PDB:3SH5
PDBsum:3SH4 PDBsum:3SH5 ProteinModelPortal:P98160 SMR:P98160
IntAct:P98160 MINT:MINT-123304 STRING:P98160 PhosphoSite:P98160
DMDM:218512120 DOSAC-COBS-2DPAGE:P98160 PaxDb:P98160 PRIDE:P98160
Ensembl:ENST00000374695 GeneID:3339 KEGG:hsa:3339 UCSC:uc001bfj.3
CTD:3339 GeneCards:GC01M022148 H-InvDB:HIX0023554
H-InvDB:HIX0023598 HGNC:HGNC:5273 HPA:CAB009820 HPA:CAB020718
HPA:HPA018892 MIM:142461 MIM:224410 MIM:255800 neXtProt:NX_P98160
Orphanet:1865 Orphanet:800 PharmGKB:PA29537 eggNOG:NOG258321
HOGENOM:HOG000049276 HOVERGEN:HBG008174 InParanoid:P98160 KO:K06255
OMA:GVTQQCA OrthoDB:EOG44QT00 ChiTaRS:HSPG2 GenomeRNAi:3339
NextBio:13216 ArrayExpress:P98160 Bgee:P98160 CleanEx:HS_HSPG2
Genevestigator:P98160 GermOnline:ENSG00000142798 Uniprot:P98160
Length = 4391
Score = 318 (117.0 bits), Expect = 1.3e-36, Sum P(3) = 1.3e-36
Identities = 75/251 (29%), Positives = 126/251 (50%)
Query: 47 CNKTPCEHGGKCITTP-GSSY-CLCPLGFTGDLCQTRLDLQVPQFNGS-SYLRYQGLGEQ 103
C+ C C+ P G Y C C LG +G C+ + + P +G+ SYL L
Sbjct: 3888 CHPEACGPDATCVNRPDGRGYTCRCHLGRSGLRCEEGVTVTTPSLSGAGSYLALPALTNT 3947
Query: 104 YLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSN 163
+ L L + FK + P+G+LL++G ++ V DF++L + +++F ++LG+G A LRS+
Sbjct: 3948 HHELR-LDVEFKPLAPDGVLLFSGGKSGPVEDFVSLAMVGGHLEFRYELGSGLAVLRSAE 4006
Query: 164 PISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSPK 223
P++LG WH++ R + L+V+ SPG GGV +SP
Sbjct: 4007 PLALGRWHRVSAERLNKDGSLRVNGGRPVLRSSPGKSQGLNLHTLLYLGGVEPSVPLSPA 4066
Query: 224 VKIKSSFIGCIQKVLINNHELNILGEAI--QGVNVVNCAHPCITQPCGSGS-CVPL--YD 278
+ + F GC+ +V +N L++ + QG+ + PC QPC G+ C+P Y+
Sbjct: 4067 TNMSAHFRGCVGEVSVNGKRLDLTYSFLGSQGIGQCYDSSPCERQPCQHGATCMPAGEYE 4126
Query: 279 GYKCVCTQSCK 289
++C+C K
Sbjct: 4127 -FQCLCRDGFK 4136
Score = 208 (78.3 bits), Expect = 1.5e-24, Sum P(4) = 1.5e-24
Identities = 62/212 (29%), Positives = 93/212 (43%)
Query: 86 VPQFNGS--SYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHR---------ADGVG 134
VP F + S+L + + Y ++ I F+ +G+LLYNG + A+
Sbjct: 3663 VPYFTQTPYSFLPLPTIKDAYRKF-EIKITFRPDSADGMLLYNGQKRVPGSPTNLANRQP 3721
Query: 135 DFIALYLNDRYVDFTFDLGTGAATLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQI 194
DFI+ L +F FD G+G AT+R P++LG +H + L R+ L V
Sbjct: 3722 DFISFGLVGGRPEFRFDAGSGMATIRHPTPLALGHFHTVTLLRSLTQGSLIVGDLAPVNG 3781
Query: 195 LSPGPFTQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGV 254
S G F GG PDY + PK + S FIGC++++ I E+ +
Sbjct: 3782 TSQGKFQGLDLNEELYLGGYPDYGAI-PKAGLSSGFIGCVRELRIQGEEIVFHDLNLTAH 3840
Query: 255 NVVNCAHPCITQPC-GSGSCVPLYDG-YKCVC 284
+ +C C +PC G C Y CVC
Sbjct: 3841 GISHCP-TCRDRPCQNGGQCHDSESSSYVCVC 3871
Score = 176 (67.0 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
Identities = 41/125 (32%), Positives = 64/125 (51%)
Query: 120 NGILLYNGHRADGVG---DFIALYLNDRYVDFTFDLGTGAATLRSSNPISLGEWHKLRLT 176
+G+LL+ G G DFI+L L D ++ F + LG+G A L S +PI+ GEWH++
Sbjct: 4240 SGLLLWQGVEVGEAGQGKDFISLGLQDGHLVFRYQLGSGEARLVSEDPINDGEWHRVTAL 4299
Query: 177 RTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQK 236
R GR +QVD SPGP GG PD ++ + S GC++
Sbjct: 4300 REGRRGSIQVDGEELVSGRSPGPNVAVNAKGSVYIGGAPDVATLTGG-RFSSGITGCVKN 4358
Query: 237 VLINN 241
+++++
Sbjct: 4359 LVLHS 4363
Score = 130 (50.8 bits), Expect = 1.3e-36, Sum P(3) = 1.3e-36
Identities = 47/168 (27%), Positives = 73/168 (43%)
Query: 259 CAH---PC-ITQPC-GSGSCVPLYDGYKCVCTQS-----CKES--H-LTEVMCASFDHGA 305
C H PC + +PC G+C G +C+C C++ H + E G
Sbjct: 4140 CEHEENPCQLREPCLHGGTC----QGTRCLCLPGFSGPRCQQGSGHGIAESDWHLEGSGG 4195
Query: 306 SFLHYLDPEIIHSSGLLHYKFQLHVDFR-ITGYEFNIDMRIKTSSSSGLILWTG-----S 359
+ H G L F HV R + I++ ++TS++SGL+LW G +
Sbjct: 4196 NDAPGQYGAYFHDDGFL--AFPGHVFSRSLPEVPETIELEVRTSTASGLLLWQGVEVGEA 4253
Query: 360 SQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGVWHRLTVHR 407
Q KDF++LG+ +G+ Y + IN+G WHR+T R
Sbjct: 4254 GQGKDFISLGLQDGHLVFRYQLGSGEARLVS-EDPINDGEWHRVTALR 4300
Score = 107 (42.7 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
Identities = 17/34 (50%), Positives = 23/34 (67%)
Query: 47 CNKTPCEHGGKCITTPGSSY-CLCPLGFTGDLCQ 79
C PC++GG+C + SSY C+CP GFTG C+
Sbjct: 3848 CRDRPCQNGGQCHDSESSSYVCVCPAGFTGSRCE 3881
Score = 98 (39.6 bits), Expect = 4.5e-12, Sum P(3) = 4.5e-12
Identities = 18/43 (41%), Positives = 24/43 (55%)
Query: 41 ECLEDK-CNKTPCEHGGKCITTPGSSY---CLCPLGFTGDLCQ 79
+C + C + PC+HG C+ P Y CLC GF GDLC+
Sbjct: 4101 QCYDSSPCERQPCQHGATCM--PAGEYEFQCLCRDGFKGDLCE 4141
Score = 85 (35.0 bits), Expect = 1.3e-36, Sum P(3) = 1.3e-36
Identities = 17/62 (27%), Positives = 31/62 (50%)
Query: 439 RTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVEDIEELTRSKYHHSFKGWISNL 498
R G++ I++D + + S G +N +Y+GG D+ LT ++ G + NL
Sbjct: 4300 REGRRGSIQVDGEELVSGRSPGPNVAVNAKGSVYIGGAPDVATLTGGRFSSGITGCVKNL 4359
Query: 499 IL 500
+L
Sbjct: 4360 VL 4361
Score = 76 (31.8 bits), Expect = 4.6e-19, Sum P(4) = 4.6e-19
Identities = 18/75 (24%), Positives = 35/75 (46%)
Query: 335 TGYEFNIDMRIKTSSSSGLILWTG--SSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQ 392
T +E +D+ K + G++L++G S +DF++L + G+ Y +
Sbjct: 3947 THHELRLDVEFKPLAPDGVLLFSGGKSGPVEDFVSLAMVGGHLEFRYELGSGLAVLRSAE 4006
Query: 393 TKINNGVWHRLTVHR 407
+ G WHR++ R
Sbjct: 4007 P-LALGRWHRVSAER 4020
Score = 63 (27.2 bits), Expect = 7.7e-17, Sum P(4) = 7.7e-17
Identities = 25/87 (28%), Positives = 44/87 (50%)
Query: 432 LSIQRLHRTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVEDIEELT-RSKYHHS 490
+S +RL++ G +R++ + S GK + LN + LY+GGVE L+ +
Sbjct: 4016 VSAERLNKDGS---LRVNGGRPVLRSSPGKSQGLNLHTLLYLGGVEPSVPLSPATNMSAH 4072
Query: 491 FKGWISNLILSNDYQVKLPLS--RSQG 515
F+G + + + N ++ L S SQG
Sbjct: 4073 FRGCVGEVSV-NGKRLDLTYSFLGSQG 4098
Score = 54 (24.1 bits), Expect = 1.5e-24, Sum P(4) = 1.5e-24
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 67 CLCPLGFTGDLCQTRLDLQVPQFNGSSYL 95
C CP+G++G C++ D + G YL
Sbjct: 731 CRCPIGYSGLSCES-CDAHFTRVPGGPYL 758
Score = 46 (21.3 bits), Expect = 9.9e-24, Sum P(4) = 9.9e-24
Identities = 14/52 (26%), Positives = 21/52 (40%)
Query: 32 GNKIKGRSKECLEDKCNKTPCEH--GGKCITTPGSSY-CL-CPLGFTGDLCQ 79
G+ G ++C C T E+ C + Y C C G+TG C+
Sbjct: 1600 GDATAGTPEDCQPCACPLTNPENMFSRTCESLGAGGYRCTACEPGYTGQYCE 1651
Score = 45 (20.9 bits), Expect = 1.3e-23, Sum P(4) = 1.3e-23
Identities = 7/13 (53%), Positives = 8/13 (61%)
Query: 67 CLCPLGFTGDLCQ 79
C CP G+ G CQ
Sbjct: 1126 CSCPPGYRGPSCQ 1138
Score = 42 (19.8 bits), Expect = 2.5e-23, Sum P(4) = 2.5e-23
Identities = 7/13 (53%), Positives = 8/13 (61%)
Query: 67 CLCPLGFTGDLCQ 79
C CP G+ G CQ
Sbjct: 1530 CRCPPGYIGLSCQ 1542
Score = 41 (19.5 bits), Expect = 2.4e-06, Sum P(3) = 2.4e-06
Identities = 25/106 (23%), Positives = 43/106 (40%)
Query: 1 MVKSDNQVILDDWNTVRVFRHRWDAWIQLNDGNKIKGRSKECLEDKCN-KTPCEHGGKCI 59
+++S + L W+ V R D +++N G + RS N T GG
Sbjct: 4001 VLRSAEPLALGRWHRVSAERLNKDGSLRVNGGRPVL-RSSPGKSQGLNLHTLLYLGGVEP 4059
Query: 60 TTPGSSYCLCPLGFTGDLCQTRLDLQVPQFNGS-SYLRYQGLGEQY 104
+ P S F G C + + + + + S+L QG+G+ Y
Sbjct: 4060 SVPLSPATNMSAHFRG--CVGEVSVNGKRLDLTYSFLGSQGIGQCY 4103
>UNIPROTKB|O00468 [details] [associations]
symbol:AGRN "Agrin" species:9606 "Homo sapiens" [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0043236 "laminin binding" evidence=TAS]
[GO:0007213 "G-protein coupled acetylcholine receptor signaling
pathway" evidence=TAS] [GO:0045162 "clustering of voltage-gated
sodium channels" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0043113 "receptor clustering" evidence=IDA;IMP]
[GO:0007165 "signal transduction" evidence=TAS] [GO:0005605 "basal
lamina" evidence=IDA] [GO:0050808 "synapse organization"
evidence=TAS] [GO:0005200 "structural constituent of cytoskeleton"
evidence=TAS] [GO:0031012 "extracellular matrix" evidence=IDA;TAS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0045202 "synapse"
evidence=ISS] [GO:0045887 "positive regulation of synaptic growth
at neuromuscular junction" evidence=ISS] [GO:0032321 "positive
regulation of Rho GTPase activity" evidence=ISS] [GO:0051491
"positive regulation of filopodium assembly" evidence=ISS]
[GO:0035374 "chondroitin sulfate binding" evidence=ISS] [GO:0043395
"heparan sulfate proteoglycan binding" evidence=ISS] [GO:0005509
"calcium ion binding" evidence=ISS] [GO:0033691 "sialic acid
binding" evidence=ISS] [GO:0002162 "dystroglycan binding"
evidence=ISS] [GO:0005796 "Golgi lumen" evidence=TAS] [GO:0005886
"plasma membrane" evidence=TAS] [GO:0005975 "carbohydrate metabolic
process" evidence=TAS] [GO:0006024 "glycosaminoglycan biosynthetic
process" evidence=TAS] [GO:0006027 "glycosaminoglycan catabolic
process" evidence=TAS] [GO:0007411 "axon guidance" evidence=TAS]
[GO:0030203 "glycosaminoglycan metabolic process" evidence=TAS]
[GO:0030204 "chondroitin sulfate metabolic process" evidence=TAS]
[GO:0043202 "lysosomal lumen" evidence=TAS] [GO:0044281 "small
molecule metabolic process" evidence=TAS] Reactome:REACT_111217
InterPro:IPR000742 InterPro:IPR002350 InterPro:IPR004850
Pfam:PF00008 Pfam:PF00050 Pfam:PF03146 Pfam:PF07648 PROSITE:PS50026
PROSITE:PS51121 PROSITE:PS51465 SMART:SM00181 SMART:SM00280
GO:GO:0005886 Reactome:REACT_111045 Reactome:REACT_116125
GO:GO:0007411 GO:GO:0005615 GO:GO:0009986 GO:GO:0043525
GO:GO:0005200 GO:GO:0005975 GO:GO:0007528 GO:GO:0045887
GO:GO:0045944 GO:GO:0007009 GO:GO:0050808 GO:GO:0045202
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0007416 GO:GO:0005605 GO:GO:0043236
GO:GO:0043113 Orphanet:98913 GO:GO:0007213 PROSITE:PS01186
GO:GO:0033691 GO:GO:0043202 GO:GO:0002162 CTD:375790
eggNOG:NOG312635 HOGENOM:HOG000033860 HOVERGEN:HBG080471 KO:K06254
OrthoDB:EOG4HQDHD GO:GO:0030548 GO:GO:0035374 GO:GO:0043395
GO:GO:0051491 GO:GO:2000541 GO:GO:0032321 GO:GO:0032314
InterPro:IPR002049 InterPro:IPR003645 InterPro:IPR001791
InterPro:IPR000082 InterPro:IPR008993 Pfam:PF00053 Pfam:PF00054
Pfam:PF01390 SMART:SM00180 SMART:SM00274 SMART:SM00282
SMART:SM00200 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 PROSITE:PS50024 EMBL:U84406 EMBL:AB191264
EMBL:AL645608 EMBL:AF016903 EMBL:BC004220 EMBL:BC007649
EMBL:BC034009 EMBL:BC063620 IPI:IPI00374563 RefSeq:NP_940978.2
UniGene:Hs.273330 ProteinModelPortal:O00468 SMR:O00468
IntAct:O00468 MINT:MINT-4053526 STRING:O00468 PhosphoSite:O00468
PaxDb:O00468 PRIDE:O00468 Ensembl:ENST00000379370 GeneID:375790
KEGG:hsa:375790 UCSC:uc001ack.2 GeneCards:GC01P000946 HGNC:HGNC:329
HPA:HPA040090 MIM:103320 MIM:254300 neXtProt:NX_O00468
PharmGKB:PA24626 InParanoid:O00468 OMA:TNRWLRV GenomeRNAi:375790
NextBio:100617 ArrayExpress:O00468 Bgee:O00468 CleanEx:HS_AGRN
Genevestigator:O00468 GermOnline:ENSG00000188157 GO:GO:0005796
GO:GO:0030204 GO:GO:0045162 GO:GO:0006024 GO:GO:0006027
GO:GO:0045213 GO:GO:0001934 InterPro:IPR011497 Uniprot:O00468
Length = 2067
Score = 390 (142.3 bits), Expect = 3.0e-36, Sum P(2) = 3.0e-36
Identities = 98/263 (37%), Positives = 132/263 (50%)
Query: 42 CLEDK--CNKTPCEHGGKCITTP-GSSYCLCPLGFTGDLCQTRL--DLQVP---QFNGSS 93
C ++K C PC C P G + C CPLG G CQT D P FNG S
Sbjct: 1585 CADEKSPCQPNPCHGAAPCRVLPEGGAQCECPLGREGTFCQTASGQDGSGPFLADFNGFS 1644
Query: 94 YLRYQGLGEQYLSL---LDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTF 150
+L +GL L + L +VF A P+G+LLYNG + DG GDF++L L DR ++F +
Sbjct: 1645 HLELRGLHTFARDLGEKMALEVVFLARGPSGLLLYNGQKTDGKGDFVSLALRDRRLEFRY 1704
Query: 151 DLGTGAATLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPG----PFTQXXXX 206
DLG GAA +RS P++LG W ++ L R GR L+V P SP P T
Sbjct: 1705 DLGKGAAVIRSREPVTLGAWTRVSLERNGRKGALRVGDGPRVLGESPKSRKVPHTVLNLK 1764
Query: 207 XXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNCA-HPCIT 265
GG PD++ ++ + S F G IQ V + +L ++ V+V + A HPC
Sbjct: 1765 EPLYVGGAPDFSKLARAAAVSSGFDGAIQLVSLGGRQLLTPEHVLRQVDVTSFAGHPCTR 1824
Query: 266 ---QPCGSG-SCVPLYDGYKCVC 284
PC +G SCVP Y C+C
Sbjct: 1825 ASGHPCLNGASCVPREAAYVCLC 1847
Score = 348 (127.6 bits), Expect = 7.7e-36, Sum P(4) = 7.7e-36
Identities = 90/250 (36%), Positives = 123/250 (49%)
Query: 47 CNKTPCEHGGKCI--TTPGSSYCLCPLGFTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQY 104
C+ PC HGG C G C CP G G +C+ L VP F G S+L + L +
Sbjct: 1333 CDSQPCFHGGTCQDWALGGGFTCSCPAGRGGAVCEKVLGAPVPAFEGRSFLAFPTLRAYH 1392
Query: 105 LSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSNP 164
L L + F+A+EP G+LLYNG+ A G DF+AL L D V FD G+G A L S+ P
Sbjct: 1393 T--LRLALEFRALEPQGLLLYNGN-ARGK-DFLALALLDGRVQLRFDTGSGPAVLTSAVP 1448
Query: 165 ISLGEWHKLRLTRTGRHAYLQVDRFPSSQIL--SPGPFTQXXXXXXXXXGGVPDYN--IV 220
+ G+WH+L L+R R L VD + +L SP GGVP+ +
Sbjct: 1449 VEPGQWHRLELSRHWRRGTLSVDG--ETPVLGESPSGTDGLNLDTDLFVGGVPEDQAAVA 1506
Query: 221 SPKVKIKSSFIGCIQKVLINNHELNI---LGEAIQGVNVVNCA-HPCITQPCGSGS-CVP 275
+ + + GCI+ + +NN L + G A +G V C HPC+ PC G+ C
Sbjct: 1507 LERTFVGAGLRGCIRLLDVNNQRLELGIGPGAATRGSGVGECGDHPCLPNPCHGGAPCQN 1566
Query: 276 LYDG-YKCVC 284
L G + C C
Sbjct: 1567 LEAGRFHCQC 1576
Score = 177 (67.4 bits), Expect = 3.7e-12, Sum P(3) = 3.7e-12
Identities = 62/224 (27%), Positives = 98/224 (43%)
Query: 212 GGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNCA-HPCIT---QP 267
GG PD++ ++ + S F G IQ V + +L ++ V+V + A HPC P
Sbjct: 1770 GGAPDFSKLARAAAVSSGFDGAIQLVSLGGRQLLTPEHVLRQVDVTSFAGHPCTRASGHP 1829
Query: 268 CGSG-SCVPLYDGYKCVCTQS-----CK----ESHLTEVMCASFDHGASFLHYLD----- 312
C +G SCVP Y C+C C+ E +V +FD G +F+ YL+
Sbjct: 1830 CLNGASCVPREAAYVCLCPGGFSGPHCEKGLVEKSAGDVDTLAFD-GRTFVEYLNAVTES 1888
Query: 313 --------PEIIHSSGLLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSK- 363
PE + SG LH K + F + +R T ++ GL+LW+G + +
Sbjct: 1889 ELANEIPVPETL-DSGALHEK-------ALQSNHFELSLR--TEATQGLVLWSGKATERA 1938
Query: 364 DFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGVWHRLTVHR 407
D++AL I +G+ + Y +N W R+ HR
Sbjct: 1939 DYVALAIVDGHLQLSYNLGSQPVVLRST-VPVNTNRWLRVVAHR 1981
Score = 162 (62.1 bits), Expect = 1.9e-11, Sum P(3) = 1.9e-11
Identities = 46/182 (25%), Positives = 89/182 (48%)
Query: 83 DLQVPQFNGSSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLN 142
++ VP+ S L + L + +L++ +A + G++L++G +A D++AL +
Sbjct: 1893 EIPVPETLDSGALHEKALQSNHF---ELSLRTEATQ--GLVLWSG-KATERADYVALAIV 1946
Query: 143 DRYVDFTFDLGTGAATLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQ 202
D ++ +++LG+ LRS+ P++ W ++ R R LQV SP TQ
Sbjct: 1947 DGHLQLSYNLGSQPVVLRSTVPVNTNRWLRVVAHREQREGSLQVGNEAPVTGSSPLGATQ 2006
Query: 203 XXXXXXXXXGGVPDYNI--VSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNCA 260
GG+P+ + PK + F+GC++ V++ H L++L +A+ + C
Sbjct: 2007 LDTDGALWLGGLPELPVGPALPKA-YGTGFVGCLRDVVVGRHPLHLLEDAVTKPELRPCP 2065
Query: 261 HP 262
P
Sbjct: 2066 TP 2067
Score = 98 (39.6 bits), Expect = 0.00056, Sum P(3) = 0.00056
Identities = 39/154 (25%), Positives = 67/154 (43%)
Query: 262 PCITQPC-GSGSCVP--LYDGYKCVCTQSCKESHLTEVMCA---SFDHGASFLHYLDPEI 315
PC +QPC G+C L G+ C C + +V+ A +F+ G SFL + P +
Sbjct: 1332 PCDSQPCFHGGTCQDWALGGGFTCSCPAGRGGAVCEKVLGAPVPAFE-GRSFLAF--PTL 1388
Query: 316 IHSSGLLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYA 375
++ +L ++FR GL+L+ G+++ KDFLAL + +G
Sbjct: 1389 -----RAYHTLRLALEFRAL-------------EPQGLLLYNGNARGKDFLALALLDGRV 1430
Query: 376 HVMYXXXXXXXXXXXXQTKINNGVWHRLTVHRNF 409
+ + + G WHRL + R++
Sbjct: 1431 QLRFDTGSGPAVLTSA-VPVEPGQWHRLELSRHW 1463
Score = 90 (36.7 bits), Expect = 7.7e-36, Sum P(4) = 7.7e-36
Identities = 37/152 (24%), Positives = 62/152 (40%)
Query: 262 PCITQPC-GSGSCVPLYDG-YKCVCTQSCKESHLTEVMCASFDHGASFLHYLDPEIIHSS 319
PC PC G+ C L +G +C C +E T AS G+ P + +
Sbjct: 1591 PCQPNPCHGAAPCRVLPEGGAQCECPLG-REG--TFCQTASGQDGSG------PFLADFN 1641
Query: 320 GLLHYKFQ-LHVDFRITGYEFNIDMRIKTSSSSGLILWTGS-SQSK-DFLALGIHNGYAH 376
G H + + LH R G + +++ SGL+L+ G + K DF++L + +
Sbjct: 1642 GFSHLELRGLHTFARDLGEKMALEVVFLARGPSGLLLYNGQKTDGKGDFVSLALRDRRLE 1701
Query: 377 VMYXXXXXXXXXXXXQTKINNGVWHRLTVHRN 408
Y + + G W R+++ RN
Sbjct: 1702 FRYDLGKGAAVIRSREP-VTLGAWTRVSLERN 1732
Score = 87 (35.7 bits), Expect = 1.9e-11, Sum P(3) = 1.9e-11
Identities = 17/53 (32%), Positives = 27/53 (50%)
Query: 51 PCEHGGKCITTPGSSYCLCPLGFTGDLCQTRL------DLQVPQFNGSSYLRY 97
PC +G C+ + CLCP GF+G C+ L D+ F+G +++ Y
Sbjct: 1829 PCLNGASCVPREAAYVCLCPGGFSGPHCEKGLVEKSAGDVDTLAFDGRTFVEY 1881
Score = 76 (31.8 bits), Expect = 3.7e-12, Sum P(3) = 3.7e-12
Identities = 10/25 (40%), Positives = 17/25 (68%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCPL 71
C + CE G +C+ GS++C+CP+
Sbjct: 901 CAEMRCEFGARCVEESGSAHCVCPM 925
Score = 70 (29.7 bits), Expect = 1.5e-11, Sum P(3) = 1.5e-11
Identities = 14/39 (35%), Positives = 16/39 (41%)
Query: 41 ECLEDKCNKTPCEHGGKCITTP-GSSYCLCPLGFTGDLC 78
EC + C PC G C G +C CP G G C
Sbjct: 1547 ECGDHPCLPNPCHGGAPCQNLEAGRFHCQCPPGRVGPTC 1585
Score = 55 (24.4 bits), Expect = 7.7e-36, Sum P(4) = 7.7e-36
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 36 KGRSKECL-EDKCNKTPCEHGGKCITTPGSSYCLC 69
K RS +C D+C + PC C++ G C C
Sbjct: 383 KVRSGQCQGRDQCPE-PCRFNAVCLSRRGRPRCSC 416
Score = 52 (23.4 bits), Expect = 1.6e-35, Sum P(4) = 1.6e-35
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 45 DKCNKTPCEHGGKCI-TTPG-SSYCLCP 70
D C+ C G C + G ++ CLCP
Sbjct: 246 DPCSNVTCSFGSTCARSADGLTASCLCP 273
Score = 50 (22.7 bits), Expect = 7.7e-36, Sum P(4) = 7.7e-36
Identities = 17/46 (36%), Positives = 21/46 (45%)
Query: 465 LNTDSGLYVGGVEDIEELTRSKYHHS-FKGWISNLILSNDYQVKLP 509
LN LYVGG D +L R+ S F G I L+ Q+ P
Sbjct: 1761 LNLKEPLYVGGAPDFSKLARAAAVSSGFDGAIQ-LVSLGGRQLLTP 1805
Score = 50 (22.7 bits), Expect = 0.00056, Sum P(3) = 0.00056
Identities = 24/86 (27%), Positives = 43/86 (50%)
Query: 437 LHRTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGV-ED--IEELTRSKYHHSFKG 493
L R ++ + +D + + S + LN D+ L+VGGV ED L R+ +G
Sbjct: 1459 LSRHWRRGTLSVDGETPVLGESPSGTDGLNLDTDLFVGGVPEDQAAVALERTFVGAGLRG 1518
Query: 494 WISNLILSNDYQVKL---PLSRSQGS 516
I L+ N+ +++L P + ++GS
Sbjct: 1519 CI-RLLDVNNQRLELGIGPGAATRGS 1543
Score = 48 (22.0 bits), Expect = 3.0e-36, Sum P(2) = 3.0e-36
Identities = 10/42 (23%), Positives = 23/42 (54%)
Query: 438 HRTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVEDI 479
HR ++ +++ + + S QL+TD L++GG+ ++
Sbjct: 1980 HREQREGSLQVGNEAPVTGSSPLGATQLDTDGALWLGGLPEL 2021
Score = 46 (21.3 bits), Expect = 6.5e-35, Sum P(4) = 6.5e-35
Identities = 13/40 (32%), Positives = 18/40 (45%)
Query: 32 GNKIK-GRSKECLEDKCNKTPCEHGGKCITTPGSSYCLCP 70
G +I+ R C D+C + C G C G C+CP
Sbjct: 523 GREIQVARKGPC--DRCGQ--CRFGALCEAETGR--CVCP 556
Score = 46 (21.3 bits), Expect = 1.9e-11, Sum P(3) = 1.9e-11
Identities = 10/39 (25%), Positives = 20/39 (51%)
Query: 1 MVKSDNQVILDDWNTVRVFRHRWDAWIQLNDGNKIKGRS 39
+++S V L W V + R+ +++ DG ++ G S
Sbjct: 1712 VIRSREPVTLGAWTRVSLERNGRKGALRVGDGPRVLGES 1750
Score = 46 (21.3 bits), Expect = 4.0e-09, Sum P(3) = 4.0e-09
Identities = 24/88 (27%), Positives = 32/88 (36%)
Query: 51 PCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQFNGSS--YLRYQGL--GEQYLS 106
PC C + PGS C G G T +L+ + Y+ QG G +
Sbjct: 702 PCVCDFSCQSVPGSPVC----GSDGVTYSTECELKKARCESQRGLYVAAQGACRGPTFAP 757
Query: 107 LLDLTIVFKAIEPNGILLYNGHRADGVG 134
L + + A P G N A GVG
Sbjct: 758 LPPVAPLHCAQTPYGCCQDNITAARGVG 785
Score = 40 (19.1 bits), Expect = 2.7e-34, Sum P(4) = 2.7e-34
Identities = 7/23 (30%), Positives = 8/23 (34%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLC 69
C C G C G + C C
Sbjct: 468 CLGVQCAFGATCAVKNGQAACEC 490
>UNIPROTKB|F1MER7 [details] [associations]
symbol:HSPG2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060351 "cartilage development involved in endochondral
bone morphogenesis" evidence=IEA] [GO:0048738 "cardiac muscle
tissue development" evidence=IEA] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA] [GO:0030198 "extracellular
matrix organization" evidence=IEA] [GO:0008104 "protein
localization" evidence=IEA] [GO:0008022 "protein C-terminus
binding" evidence=IEA] [GO:0007420 "brain development"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0005605 "basal lamina" evidence=IEA] [GO:0002062 "chondrocyte
differentiation" evidence=IEA] [GO:0001958 "endochondral
ossification" evidence=IEA] InterPro:IPR000742 InterPro:IPR002172
InterPro:IPR007110 Pfam:PF00008 Pfam:PF00057 PROSITE:PS50026
PROSITE:PS50068 PROSITE:PS50835 SMART:SM00181 SMART:SM00192
GO:GO:0005615 GO:GO:0008104 GO:GO:0007420 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408 GO:GO:0030198
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0048738
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0005605 PROSITE:PS01186 Gene3D:4.10.400.10
InterPro:IPR023415 SUPFAM:SSF57424 PROSITE:PS01209
InterPro:IPR002049 InterPro:IPR001791 InterPro:IPR000082
Pfam:PF00053 Pfam:PF00054 SMART:SM00180 SMART:SM00282 SMART:SM00200
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 PROSITE:PS50024
GeneTree:ENSGT00530000063501 InterPro:IPR013098 Pfam:PF07679
GO:GO:0048704 GO:GO:0002062 GO:GO:0001958 Pfam:PF02210
GO:GO:0060351 Pfam:PF12661 InterPro:IPR018031 InterPro:IPR000034
Pfam:PF00052 SMART:SM00281 PROSITE:PS51115 OMA:GVTQQCA
EMBL:DAAA02006470 EMBL:DAAA02006471 IPI:IPI01000857 IntAct:F1MER7
Ensembl:ENSBTAT00000022744 Uniprot:F1MER7
Length = 4374
Score = 318 (117.0 bits), Expect = 2.2e-35, Sum P(3) = 2.2e-35
Identities = 76/251 (30%), Positives = 124/251 (49%)
Query: 47 CNKTPCEHGGKCITTP-GSSY-CLCPLGFTGDLCQTRLDLQVPQFNGS-SYLRYQGLGEQ 103
C+ C C+ P G Y C C LG +G C+ + + P +G+ SYL L
Sbjct: 3871 CHPEACGPDATCVNRPDGHGYTCRCHLGRSGMRCEEGVTVTTPSLSGTDSYLALPALTNT 3930
Query: 104 YLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSN 163
+ L L + FK + P+G+LL++G ++ V DF++L + +++F ++LG+G A LRS+
Sbjct: 3931 HHELR-LDVEFKPLAPDGVLLFSGGKSGPVEDFVSLAMVGGHLEFRYELGSGLAVLRSAE 3989
Query: 164 PISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSPK 223
P++LG WH + R + LQV+ SPG GGV + P
Sbjct: 3990 PLALGRWHHVSAERLNKDGSLQVNGGRPVLRSSPGKSQGLNLHTLLYLGGVEPAVQLPPA 4049
Query: 224 VKIKSSFIGCIQKVLINNHELNILGEAI--QGVNVVNCAHPCITQPCGSGS-CVPL--YD 278
+ + F GC+ +V +N L++ + QGV + PC QPC G+ C+P Y+
Sbjct: 4050 TNVSAHFHGCVGEVSVNGKRLDLTYSFLGSQGVGQCYDSSPCERQPCRHGATCMPAGEYE 4109
Query: 279 GYKCVCTQSCK 289
++C+C K
Sbjct: 4110 -FQCLCRDGFK 4119
Score = 212 (79.7 bits), Expect = 8.8e-24, Sum P(4) = 8.8e-24
Identities = 62/212 (29%), Positives = 94/212 (44%)
Query: 86 VPQFNGS--SYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHR---------ADGVG 134
VP F + S+L + + Y ++ I F+ +G+LLYNG + A+
Sbjct: 3646 VPYFTQTPYSFLPLPTIKDAYRKF-EIKITFRPDSADGMLLYNGQKQIPGSPANLANRQP 3704
Query: 135 DFIALYLNDRYVDFTFDLGTGAATLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQI 194
DFI+ L +F FD G+G AT+R P++LG++H + L R+ L V
Sbjct: 3705 DFISFGLVGGRPEFRFDAGSGMATIRHPTPLALGQFHTVTLLRSLTQGSLIVGSLAPVNG 3764
Query: 195 LSPGPFTQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGV 254
S G F GG PDY + PK + S FIGC++++ I E+ +
Sbjct: 3765 TSQGKFQGLDLNEELYLGGYPDYGAI-PKAGLSSGFIGCVRELRIQGEEIVFHDLNLTAH 3823
Query: 255 NVVNCAHPCITQPC-GSGSCVPLYDG-YKCVC 284
+ +C C +PC G C Y CVC
Sbjct: 3824 GISHCP-TCRDRPCQNGGQCQDSESSSYVCVC 3854
Score = 182 (69.1 bits), Expect = 4.7e-15, Sum P(2) = 4.7e-15
Identities = 51/157 (32%), Positives = 80/157 (50%)
Query: 120 NGILLYNGHRA--DGVG-DFIALYLNDRYVDFTFDLGTGAATLRSSNPISLGEWHKLRLT 176
+G+L++ G G G DFI+L L D ++ F++ LG+G A L S +PI+ GEWH++
Sbjct: 4223 SGLLVWQGEETGQSGRGKDFISLGLQDGHLVFSYQLGSGEARLVSEDPINDGEWHRVTAL 4282
Query: 177 RTGRHAYLQVD--RFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCI 234
R G+ +QVD S Q SPGP GG P+ +++ + S GCI
Sbjct: 4283 REGQRGSIQVDGEELVSGQ--SPGPNVAVNTKGSIYVGGAPNVAVLTGG-RFSSGITGCI 4339
Query: 235 QKVLINNHELNILGEAIQGVNVVNCAHP-CITQPCGS 270
+ +++ H G Q V++ + A T+PC S
Sbjct: 4340 KNLVL--HSARPGGPPPQPVDMQHRAQAGANTRPCPS 4374
Score = 117 (46.2 bits), Expect = 2.2e-35, Sum P(3) = 2.2e-35
Identities = 24/72 (33%), Positives = 41/72 (56%)
Query: 341 IDMRIKTSSSSGLILWTG-----SSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTKI 395
I++ ++TS++SGL++W G S + KDF++LG+ +G+ Y + I
Sbjct: 4213 IELEVRTSTASGLLVWQGEETGQSGRGKDFISLGLQDGHLVFSYQLGSGEARLVS-EDPI 4271
Query: 396 NNGVWHRLTVHR 407
N+G WHR+T R
Sbjct: 4272 NDGEWHRVTALR 4283
Score = 107 (42.7 bits), Expect = 4.7e-15, Sum P(2) = 4.7e-15
Identities = 17/34 (50%), Positives = 23/34 (67%)
Query: 47 CNKTPCEHGGKCITTPGSSY-CLCPLGFTGDLCQ 79
C PC++GG+C + SSY C+CP GFTG C+
Sbjct: 3831 CRDRPCQNGGQCQDSESSSYVCVCPAGFTGSRCE 3864
Score = 96 (38.9 bits), Expect = 1.4e-10, Sum P(3) = 1.4e-10
Identities = 18/43 (41%), Positives = 23/43 (53%)
Query: 41 ECLEDK-CNKTPCEHGGKCITTPGSSY---CLCPLGFTGDLCQ 79
+C + C + PC HG C+ P Y CLC GF GDLC+
Sbjct: 4084 QCYDSSPCERQPCRHGATCM--PAGEYEFQCLCRDGFKGDLCE 4124
Score = 91 (37.1 bits), Expect = 4.4e-10, Sum P(3) = 4.4e-10
Identities = 23/50 (46%), Positives = 26/50 (52%)
Query: 31 DGNKIKGRSKECLEDKCN-KTPCEHGGKCITTPGSSYCLCPLGFTGDLCQ 79
DG KG E E+ C PC HGG C T +CLCP GF+G CQ
Sbjct: 4116 DG--FKGDLCEHEENPCQLHEPCLHGGTCQGT----HCLCPPGFSGPRCQ 4159
Score = 86 (35.3 bits), Expect = 2.2e-35, Sum P(3) = 2.2e-35
Identities = 19/62 (30%), Positives = 32/62 (51%)
Query: 439 RTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVEDIEELTRSKYHHSFKGWISNL 498
R G++ I++D + + S G +NT +YVGG ++ LT ++ G I NL
Sbjct: 4283 REGQRGSIQVDGEELVSGQSPGPNVAVNTKGSIYVGGAPNVAVLTGGRFSSGITGCIKNL 4342
Query: 499 IL 500
+L
Sbjct: 4343 VL 4344
Score = 59 (25.8 bits), Expect = 7.8e-14, Sum P(3) = 7.8e-14
Identities = 21/69 (30%), Positives = 35/69 (50%)
Query: 432 LSIQRLHRTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVEDIEEL---TRSKYH 488
+S +RL++ G ++++ + S GK + LN + LY+GGVE +L T H
Sbjct: 3999 VSAERLNKDGS---LQVNGGRPVLRSSPGKSQGLNLHTLLYLGGVEPAVQLPPATNVSAH 4055
Query: 489 -HSFKGWIS 496
H G +S
Sbjct: 4056 FHGCVGEVS 4064
Score = 54 (24.1 bits), Expect = 8.8e-24, Sum P(4) = 8.8e-24
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 67 CLCPLGFTGDLCQTRLDLQVPQFNGSSYL 95
C CP+G++G C++ D + G YL
Sbjct: 710 CRCPIGYSGLSCES-CDAHFTRVPGGPYL 737
Score = 47 (21.6 bits), Expect = 4.5e-23, Sum P(4) = 4.5e-23
Identities = 7/13 (53%), Positives = 8/13 (61%)
Query: 67 CLCPLGFTGDLCQ 79
C CP G+ G CQ
Sbjct: 1510 CRCPPGYVGSSCQ 1522
Score = 47 (21.6 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 15/54 (27%), Positives = 21/54 (38%)
Query: 249 EAIQGVNVVNCAH--PCITQ--PCGSGSCVPLYDGYKCVCTQSCKESHLTEVMC 298
+ G + +C PC PCG+G C ++C C E H E C
Sbjct: 288 DCADGSDEADCGPTPPCEPNEFPCGNGHCALKL--WRCDGDFDC-EDHTDEADC 338
Score = 46 (21.3 bits), Expect = 5.7e-23, Sum P(4) = 5.7e-23
Identities = 7/13 (53%), Positives = 8/13 (61%)
Query: 67 CLCPLGFTGDLCQ 79
C CP G+ G CQ
Sbjct: 1105 CACPPGYRGPSCQ 1117
Score = 46 (21.3 bits), Expect = 5.7e-23, Sum P(4) = 5.7e-23
Identities = 14/52 (26%), Positives = 21/52 (40%)
Query: 32 GNKIKGRSKECLEDKCNKTPCEH--GGKCITTPGSSY-CL-CPLGFTGDLCQ 79
G+ G ++C C T E+ C + Y C C G+TG C+
Sbjct: 1580 GDATAGTPEDCQPCACPLTNPENMFSRTCESLGAGGYRCTACEPGYTGQYCE 1631
Score = 45 (20.9 bits), Expect = 7.2e-23, Sum P(4) = 7.2e-23
Identities = 14/48 (29%), Positives = 17/48 (35%)
Query: 31 DGNKIKGRSKECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLC 78
+GN I+ K C C+ G T CLC G LC
Sbjct: 838 EGNPIQPNGK-CRPINQQIVRCDERGS--TGSSGEACLCKNNVVGRLC 882
Score = 41 (19.5 bits), Expect = 4.3e-05, Sum P(3) = 4.3e-05
Identities = 8/23 (34%), Positives = 11/23 (47%)
Query: 268 CGSGSCVPLYDGYKCVCTQSCKE 290
C SG C+P Y C + C +
Sbjct: 271 CHSGHCIP--KDYVCDGQEDCAD 291
Score = 40 (19.1 bits), Expect = 5.4e-05, Sum P(3) = 5.4e-05
Identities = 28/110 (25%), Positives = 44/110 (40%)
Query: 1 MVKSDNQVILDDWNTVRVFRHRWDAWIQLNDGNKIKGRSKECLEDKCN-KTPCEHGG--K 57
+++S + L W+ V R D +Q+N G + RS N T GG
Sbjct: 3984 VLRSAEPLALGRWHHVSAERLNKDGSLQVNGGRPVL-RSSPGKSQGLNLHTLLYLGGVEP 4042
Query: 58 CITTPGSSYCLCPL-GFTGDLCQT--RLDLQVPQFNGSSYLRYQGLGEQY 104
+ P ++ G G++ RLDL S+L QG+G+ Y
Sbjct: 4043 AVQLPPATNVSAHFHGCVGEVSVNGKRLDLTY------SFLGSQGVGQCY 4086
>ZFIN|ZDB-GENE-080807-4 [details] [associations]
symbol:hspg2 "heparan sulfate proteoglycan 2"
species:7955 "Danio rerio" [GO:0007519 "skeletal muscle tissue
development" evidence=IMP] [GO:0001525 "angiogenesis" evidence=IMP]
InterPro:IPR000742 InterPro:IPR002172 InterPro:IPR007110
Pfam:PF00008 Pfam:PF00057 PROSITE:PS50026 PROSITE:PS50068
PROSITE:PS50835 SMART:SM00181 SMART:SM00192 ZFIN:ZDB-GENE-080807-4
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 GO:GO:0001525
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 Gene3D:4.10.400.10 InterPro:IPR023415
SUPFAM:SSF57424 PROSITE:PS01209 InterPro:IPR002049
InterPro:IPR001791 InterPro:IPR000082 Pfam:PF00053 Pfam:PF00054
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 PROSITE:PS50024 GeneTree:ENSGT00530000063501
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR009030 SUPFAM:SSF57184
Pfam:PF02210 GO:GO:0007519 Pfam:PF12661 InterPro:IPR018031
InterPro:IPR000034 Pfam:PF00052 SMART:SM00281 PROSITE:PS51115
EMBL:CR936463 EMBL:CR855310 IPI:IPI00889358
Ensembl:ENSDART00000111029 Bgee:F1RCP6 Uniprot:F1RCP6
Length = 3422
Score = 321 (118.1 bits), Expect = 4.1e-31, Sum P(2) = 4.1e-31
Identities = 78/266 (29%), Positives = 128/266 (48%)
Query: 47 CNKTPCEHGGKCITTP-GSSY-CLCPLGFTGDLCQTRLDLQVPQFNGS-SYLRYQGLGEQ 103
C+ C CI P G Y C C LG +G+ C + P F+G SY+ Y L
Sbjct: 2919 CHTEACGPDATCINRPSGLGYDCRCHLGKSGNKCMDGTLITTPLFDGEDSYIAYPPLTNI 2978
Query: 104 YLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSN 163
+ L + + FK ++P+G++ ++G + V DF+A+ + + +V+F ++LGTG A LRS
Sbjct: 2979 HNDLR-IEMEFKPMDPDGLMFFSGGKKMKVEDFVAVSMVNGHVEFRYELGTGQAVLRSQE 3037
Query: 164 PISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSPK 223
P+SL +WH++ R + L VD SPG GGVP +I+
Sbjct: 3038 PVSLDQWHRVVAERLNKDGSLTVDHAKEITRSSPGKAQGLNIHTPMYLGGVPSMDILPKP 3097
Query: 224 VKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNCAH--PCITQPC-GSGSCVPLYD-G 279
+ F GCI +V IN ++++ + + C PC +PC +G+C+ +
Sbjct: 3098 ANVSMLFDGCIGEVFINGKKVDLSYSFTESRAISQCNDDSPCDRRPCLHAGTCMATAEYE 3157
Query: 280 YKCVCTQSCKESHLTEVMCASFDHGA 305
Y+C C + E E++ S H +
Sbjct: 3158 YQCFCAEGY-EGDRCEIVKESCRHSS 3182
Score = 244 (91.0 bits), Expect = 1.8e-26, Sum P(3) = 1.8e-26
Identities = 70/247 (28%), Positives = 107/247 (43%)
Query: 52 CEHGGKCITTP------GSSYCLCPLGFTGDL-CQTRLDLQ---VPQFNGS--SYLRYQG 99
C G +T P +Y G + TRL++ +P F SYL
Sbjct: 2658 CRQDGHALTVPVVTESDAGTYVCTAANKQGKVEAFTRLNVHERVMPYFTQEPLSYLTLPT 2717
Query: 100 LGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATL 159
+ Y + + I F+ +G+++YNG + DFI+ L +F FD+G+G AT+
Sbjct: 2718 IKNSYKAF-SIKITFRPDNVDGMIIYNGQKKTTGADFISFGLLGGRPEFRFDVGSGMATI 2776
Query: 160 RSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNI 219
R PI LGE+H + L R L VD S G F GG P+Y++
Sbjct: 2777 RYPTPIKLGEFHTVHLYRNQTQGSLVVDGQAPVNGTSQGKFKGLDLNEELFVGGYPNYSM 2836
Query: 220 VSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNCAHPCITQPC-GSGSCVPLYD 278
++ +K+ F+GCI++++I E+ V NC C +PC G+C
Sbjct: 2837 LAKTAGLKTGFVGCIKQLIIQGDEVIFKDLDKSSTGVSNCP-TCKDRPCQNDGTCEDSVA 2895
Query: 279 G-YKCVC 284
YKC C
Sbjct: 2896 SLYKCTC 2902
Score = 177 (67.4 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 45/151 (29%), Positives = 75/151 (49%)
Query: 120 NGILLYNG-HRAD-GVG-DFIALYLNDRYVDFTFDLGTGAATLRSSNPISLGEWHKLRLT 176
+G++L+ G D G G DFI+L L + ++ F++ LG+G A + S P++ +WHK+
Sbjct: 3271 DGLILWQGVELGDQGKGKDFISLGLQNGHLVFSYQLGSGEAQIVSGEPVNDRQWHKITAV 3330
Query: 177 RTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQK 236
RTG+H YLQ+D + S G GG PD ++ K S GC++
Sbjct: 3331 RTGKHGYLQIDGGSVQRGQSQGKSIMVNTKGNIYLGGAPDMQALTGG-KYSSGMTGCVKN 3389
Query: 237 VLINN--------HELNILGEAIQGVNVVNC 259
+ + N +++ A +G+NV C
Sbjct: 3390 LSLMNARPGEQPARPIDLQVHAEEGINVERC 3420
Score = 122 (48.0 bits), Expect = 1.2e-23, Sum P(2) = 1.2e-23
Identities = 54/221 (24%), Positives = 87/221 (39%)
Query: 258 NCAHPCITQ---PCGSGSCV-PL-YDGYKCVCTQSCKESHLTEVMCASFDHGASFLHYLD 312
+C H Q C + CV P Y G C + +ES +E M + G +
Sbjct: 3177 SCRHSSQCQNGGSCVNNHCVCPAGYSGRHC---EKGQESSFSEAMWSLEGSGGNDSPIEY 3233
Query: 313 PEIIHSSGLLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTG-----SSQSKDFLA 367
H +G L + E I++ I T+S GLILW G + KDF++
Sbjct: 3234 SAYFHDNGYLALPKPMFPRSAPDSPE-TIELEINTASKDGLILWQGVELGDQGKGKDFIS 3292
Query: 368 LGIHNGYAHVMYXXXXXXXXXXXXQTKINNGVWHRLTVHRNFMVVMHGSSHTRSNKSSKI 427
LG+ NG+ Y + +N+ WH++T R+ K +
Sbjct: 3293 LGLQNGHLVFSYQLGSGEAQIVSGEP-VNDRQWHKITA-------------VRTGKHGYL 3338
Query: 428 EFKCLSIQRLHRTGKQCLIRIDTD-Y-----SMQSISGGKF 462
+ S+QR GK ++ + Y MQ+++GGK+
Sbjct: 3339 QIDGGSVQRGQSQGKSIMVNTKGNIYLGGAPDMQALTGGKY 3379
Score = 109 (43.4 bits), Expect = 4.1e-31, Sum P(2) = 4.1e-31
Identities = 24/64 (37%), Positives = 33/64 (51%)
Query: 439 RTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVEDIEELTRSKYHHSFKGWISNL 498
RTGK ++ID + S GK +NT +Y+GG D++ LT KY G + NL
Sbjct: 3331 RTGKHGYLQIDGGSVQRGQSQGKSIMVNTKGNIYLGGAPDMQALTGGKYSSGMTGCVKNL 3390
Query: 499 ILSN 502
L N
Sbjct: 3391 SLMN 3394
Score = 95 (38.5 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 16/41 (39%), Positives = 23/41 (56%)
Query: 41 ECLEDK-CNKTPCEHGGKCITTPGSSY-CLCPLGFTGDLCQ 79
+C +D C++ PC H G C+ T Y C C G+ GD C+
Sbjct: 3132 QCNDDSPCDRRPCLHAGTCMATAEYEYQCFCAEGYEGDRCE 3172
Score = 89 (36.4 bits), Expect = 1.8e-26, Sum P(3) = 1.8e-26
Identities = 46/185 (24%), Positives = 68/185 (36%)
Query: 252 QGVNVVNCAHP----CITQPCG-SGSCV--PLYDGYKCVCTQSCKESHLTEVMCASFDHG 304
+G NC H C T+ CG +C+ P GY C C HL + D
Sbjct: 2904 RGFTGSNCQHHSSLHCHTEACGPDATCINRPSGLGYDCRC-------HLGKSGNKCMDGT 2956
Query: 305 ASFLHYLDPEIIHSSGLLHYKF-QLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSK 363
D E S + + +H D RI +M K GL+ ++G + K
Sbjct: 2957 LITTPLFDGE---DSYIAYPPLTNIHNDLRI-------EMEFKPMDPDGLMFFSGGKKMK 3006
Query: 364 --DFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGVWHRLTVHR----NFMVVMHGSS 417
DF+A+ + NG+ Y Q ++ WHR+ R + V H
Sbjct: 3007 VEDFVAVSMVNGHVEFRYELGTGQAVLRS-QEPVSLDQWHRVVAERLNKDGSLTVDHAKE 3065
Query: 418 HTRSN 422
TRS+
Sbjct: 3066 ITRSS 3070
Score = 82 (33.9 bits), Expect = 6.0e-09, Sum P(3) = 6.0e-09
Identities = 15/34 (44%), Positives = 18/34 (52%)
Query: 47 CNKTPCEHGGKCITTPGSSY-CLCPLGFTGDLCQ 79
C PC++ G C + S Y C C GFTG CQ
Sbjct: 2879 CKDRPCQNDGTCEDSVASLYKCTCKRGFTGSNCQ 2912
Score = 82 (33.9 bits), Expect = 7.1e-05, Sum P(2) = 7.1e-05
Identities = 13/45 (28%), Positives = 29/45 (64%)
Query: 36 KGRSKECLEDKC-NKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQ 79
+G E +++ C + + C++GG C+ +++C+CP G++G C+
Sbjct: 3167 EGDRCEIVKESCRHSSQCQNGGSCV----NNHCVCPAGYSGRHCE 3207
Score = 63 (27.2 bits), Expect = 4.8e-07, Sum P(3) = 4.8e-07
Identities = 14/49 (28%), Positives = 19/49 (38%)
Query: 32 GNKIKGRSKECLEDKCNKTPCEHGGKC-ITTPGSSYCLCPLGFTGDLCQ 79
GN G + C C C + + G C CP G+TG C+
Sbjct: 1118 GNPKTGDPQACRPCPCLGQTSNQPSSCYLGSDGQPVCECPAGYTGRRCE 1166
Score = 61 (26.5 bits), Expect = 1.6e-21, Sum P(3) = 1.6e-21
Identities = 21/78 (26%), Positives = 38/78 (48%)
Query: 435 QRLHRTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVEDIEELTR-SKYHHSFKG 493
+RL++ G + +D + S GK + LN + +Y+GGV ++ L + + F G
Sbjct: 3050 ERLNKDGS---LTVDHAKEITRSSPGKAQGLNIHTPMYLGGVPSMDILPKPANVSMLFDG 3106
Query: 494 WISNLILSNDYQVKLPLS 511
I + + N +V L S
Sbjct: 3107 CIGEVFI-NGKKVDLSYS 3123
Score = 61 (26.5 bits), Expect = 0.00028, Sum P(3) = 0.00028
Identities = 22/101 (21%), Positives = 46/101 (45%)
Query: 339 FNIDMRIKTSSSSGLILWTGSSQSK--DFLALGIHNGYAHVMYXXXXXXXXXXXXQTKIN 396
F+I + + + G+I++ G ++ DF++ G+ G + T I
Sbjct: 2725 FSIKITFRPDNVDGMIIYNGQKKTTGADFISFGLLGGRPEFRFDVGSGMATIRY-PTPIK 2783
Query: 397 NGVWHRLTVHRNFM---VVMHGSSHTRSNKSSKIEFKCLSI 434
G +H + ++RN +V+ G + N +S+ +FK L +
Sbjct: 2784 LGEFHTVHLYRNQTQGSLVVDGQAPV--NGTSQGKFKGLDL 2822
Score = 49 (22.3 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 67 CLCPLGFTGDLCQ 79
C CP G++G CQ
Sbjct: 1049 CACPQGYSGPSCQ 1061
Score = 46 (21.3 bits), Expect = 2.3e-05, Sum P(3) = 2.3e-05
Identities = 13/47 (27%), Positives = 19/47 (40%)
Query: 32 GNKIKGRSKECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLC 78
GN ++ K C+ + C++ G P S C C G LC
Sbjct: 784 GNPLQPNGK-CIPAASPISKCDNRGTI--NPISKPCYCKSNVAGALC 827
Score = 44 (20.5 bits), Expect = 3.7e-05, Sum P(3) = 3.7e-05
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 67 CLCPLGFTGDLCQ 79
C CP G++G CQ
Sbjct: 1448 CQCPPGYSGLSCQ 1460
Score = 44 (20.5 bits), Expect = 3.7e-05, Sum P(3) = 3.7e-05
Identities = 6/14 (42%), Positives = 10/14 (71%)
Query: 67 CLCPLGFTGDLCQT 80
C CP G++G C++
Sbjct: 656 CRCPAGYSGLSCES 669
>FB|FBgn0261451 [details] [associations]
symbol:trol "terribly reduced optic lobes" species:7227
"Drosophila melanogaster" [GO:0005578 "proteinaceous extracellular
matrix" evidence=NAS] [GO:0005604 "basement membrane" evidence=ISS]
[GO:0055059 "asymmetric neuroblast division" evidence=NAS]
[GO:0045199 "maintenance of epithelial cell apical/basal polarity"
evidence=IMP] [GO:0005811 "lipid particle" evidence=IDA]
[GO:0072347 "response to anesthetic" evidence=IMP]
InterPro:IPR000742 InterPro:IPR002172 InterPro:IPR007110
Pfam:PF00008 Pfam:PF00057 PROSITE:PS50026 PROSITE:PS50068
PROSITE:PS50835 SMART:SM00181 SMART:SM00192 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0005811 EMBL:AE014298 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186
Gene3D:4.10.400.10 InterPro:IPR023415 SUPFAM:SSF57424
PROSITE:PS01209 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
Pfam:PF00054 SMART:SM00180 SMART:SM00282 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 GO:GO:0005604 InterPro:IPR013098
Pfam:PF07679 GO:GO:0045199 GO:GO:0072347 InterPro:IPR009030
SUPFAM:SSF57184 Pfam:PF02210 InterPro:IPR018031 InterPro:IPR000034
Pfam:PF00052 SMART:SM00281 PROSITE:PS51115 UniGene:Dm.14114
GeneID:45320 KEGG:dme:Dmel_CG33950 CTD:45320 FlyBase:FBgn0261451
ChiTaRS:trol GenomeRNAi:45320 NextBio:838006 RefSeq:NP_001027038.2
ProteinModelPortal:Q9W4Y3 SMR:Q9W4Y3 STRING:Q9W4Y3 PRIDE:Q9W4Y3
UCSC:CG33950-RF InParanoid:Q9W4Y3 PhylomeDB:Q9W4Y3
ArrayExpress:Q9W4Y3 Bgee:Q9W4Y3 Uniprot:Q9W4Y3
Length = 4629
Score = 268 (99.4 bits), Expect = 7.3e-25, Sum P(5) = 7.3e-25
Identities = 61/205 (29%), Positives = 99/205 (48%)
Query: 86 VPQFNGS--SYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLND 143
+PQF SY+ + L + + F+ +G+LL+NG + G GD+IAL L D
Sbjct: 3925 IPQFRQEPRSYMSFPTLPNSSFKF-NFELTFRPENGDGLLLFNG-QTRGSGDYIALSLKD 3982
Query: 144 RYVDFTFDLGTGAATLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQX 203
RY +F FD G +R+ P++L EWH +R++R R Y+QVD + Q
Sbjct: 3983 RYAEFRFDFGGKPMLVRAEEPLALNEWHTVRVSRFKRDGYIQVDEQHPVAFPTLQQIPQL 4042
Query: 204 XXXXXXXXGGVPDYNIV-SPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNCAHP 262
GGVP++ ++ + V + F+GCI ++ + + ++ EA + +C P
Sbjct: 4043 DLIEDLYIGGVPNWELLPADAVSQQVGFVGCISRLTLQGRTVELIREAKYKEGITDC-RP 4101
Query: 263 CITQPC-GSGSCVPLY--DGYKCVC 284
C PC G C+ Y C+C
Sbjct: 4102 CAQGPCQNKGVCLESQTEQAYTCIC 4126
Score = 235 (87.8 bits), Expect = 6.0e-17, Sum P(2) = 6.0e-17
Identities = 74/236 (31%), Positives = 104/236 (44%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQV-PQFNGSSYLR-----YQGL 100
C PCE+GG C + C CP GF+G CQ L L F G Y+ +Q
Sbjct: 4394 CASDPCENGGSCSEQEDVAVCSCPFGFSGKHCQEHLQLGFNASFRGDGYVELNRSHFQPA 4453
Query: 101 GEQYLSLLDLTIVFKAIEPNGILLYNGHRA--DGVG-DFIALYLNDRYVDFTFDLGTGAA 157
EQ S + IVF +PNG+L + G A + G DFIA + D YV+++ L A
Sbjct: 4454 LEQ--SYTSMGIVFTTNKPNGLLFWWGQEAGEEYTGQDFIAAAVVDGYVEYSMRLDGEEA 4511
Query: 158 TLRSSN-PISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPD 216
+R+S+ + GE H + R A L+VDR S P GG PD
Sbjct: 4512 VIRNSDIRVDNGERHIVIAKRDENTAILEVDRMLHSGETRPTSKKSMKLPGNVFVGGAPD 4571
Query: 217 YNIVSPKVKIKSSFIGCIQKVLINNH---ELNILGEAIQGVNVVNCAHPCITQPCG 269
+ + + K + GCI V++ ++N+ A+ GVN C P P G
Sbjct: 4572 LEVFTG-FRYKHNLNGCI--VVVEGETVGQINLSSAAVNGVNANVC--PANDDPLG 4622
Score = 190 (71.9 bits), Expect = 2.2e-17, Sum P(4) = 2.2e-17
Identities = 56/227 (24%), Positives = 96/227 (42%)
Query: 40 KECLEDKCNKTPCEHG-GKCITTPGSSYCLCPLGFTGDLCQTR--LDLQVPQFNGSSYLR 96
++C + TP G G+C T CLCPL +GD CQ L+ F G+S+
Sbjct: 4133 RDCAIEGTQCTPGVCGAGRCENTENDMECLCPLNRSGDRCQYNEILNEHSLNFKGNSFAA 4192
Query: 97 YQGLGEQYLSLLDLTI-VFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGT- 154
Y G ++ +++T+ V A + ++LY GD++AL L + + +
Sbjct: 4193 Y---GTPKVTKVNITLSVRPASLEDSVILYTAESTLPSGDYLALVLRGGHAELLINTAAR 4249
Query: 155 -GAATLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGG 213
+RS+ P+ L W ++ + R L+V P + +PG GG
Sbjct: 4250 LDPVVVRSAEPLPLNRWTRIEIRRRLGEGILRVGDGPERKAKAPGSDRILSLKTHLYVGG 4309
Query: 214 VPDYNI-VSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNC 259
+ V+ V I F GCI ++ +N+L + N+ +C
Sbjct: 4310 YDRSTVKVNRDVNITKGFDGCISRLYNFQKPVNLLADIKDAANIQSC 4356
Score = 92 (37.4 bits), Expect = 7.3e-25, Sum P(5) = 7.3e-25
Identities = 43/180 (23%), Positives = 66/180 (36%)
Query: 262 PCITQPC-GSGSCVPLYDGYKCVCTQSCKESHLTEVMCASFDHGASFLHYLDPEIIHSSG 320
PC + PC GSC D C C H E + F+ ASF E+ S
Sbjct: 4393 PCASDPCENGGSCSEQEDVAVCSCPFGFSGKHCQEHLQLGFN--ASFRGDGYVELNRS-- 4448
Query: 321 LLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSK-----DFLALGIHNGYA 375
H++ L + G F T+ +GL+ W G + DF+A + +GY
Sbjct: 4449 --HFQPALEQSYTSMGIVFT------TNKPNGLLFWWGQEAGEEYTGQDFIAAAVVDGYV 4500
Query: 376 HVMYXXXXXXXXXXXXQTKINNGVWHRLTVHR--NFMVV-----MH-GSSHTRSNKSSKI 427
+++NG H + R N ++ +H G + S KS K+
Sbjct: 4501 EYSMRLDGEEAVIRNSDIRVDNGERHIVIAKRDENTAILEVDRMLHSGETRPTSKKSMKL 4560
Score = 71 (30.1 bits), Expect = 6.7e-05, Sum P(4) = 6.7e-05
Identities = 39/161 (24%), Positives = 61/161 (37%)
Query: 36 KGRSKECLED--KCNKTPCEHGGKCITTPGS-SY-CLCPLGFTGDLCQTRLDLQVPQFNG 91
+ + KE + D C + PC++ G C+ + +Y C+C G+TG C P G
Sbjct: 4089 EAKYKEGITDCRPCAQGPCQNKGVCLESQTEQAYTCICQPGWTGRDCAIEGTQCTPGVCG 4148
Query: 92 SSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFD 151
+ R + L L + N IL N H + G+ A Y +
Sbjct: 4149 AG--RCENTENDMECLCPLNRSGDRCQYNEIL--NEHSLNFKGNSFAAYGTPKVTKVNIT 4204
Query: 152 LGTGAATLRSSNPI-----SLGEWHKLRLTRTGRHAYLQVD 187
L A+L S + +L L L G HA L ++
Sbjct: 4205 LSVRPASLEDSVILYTAESTLPSGDYLALVLRGGHAELLIN 4245
Score = 70 (29.7 bits), Expect = 2.2e-17, Sum P(4) = 2.2e-17
Identities = 11/35 (31%), Positives = 26/35 (74%)
Query: 1 MVKSDNQVILDDWNTVRVFRHRWDAWIQLNDGNKI 35
+V+++ + L++W+TVRV R + D +IQ+++ + +
Sbjct: 3997 LVRAEEPLALNEWHTVRVSRFKRDGYIQVDEQHPV 4031
Score = 57 (25.1 bits), Expect = 7.3e-25, Sum P(5) = 7.3e-25
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 463 EQLNTDSGLYVGGVEDIEELTRSKYHHSFKGWI 495
+ + ++VGG D+E T +Y H+ G I
Sbjct: 4556 KSMKLPGNVFVGGAPDLEVFTGFRYKHNLNGCI 4588
Score = 55 (24.4 bits), Expect = 3.8e-21, Sum P(5) = 3.8e-21
Identities = 27/118 (22%), Positives = 46/118 (38%)
Query: 263 CITQPCGSGSCVPLYDGYKCVCTQSCKESHLTEVMCASFDHGASFLHYLDPEIIHSSGLL 322
C CG+G C + +C+C + S D + L+ HS
Sbjct: 4142 CTPGVCGAGRCENTENDMECLCPLN-----------RSGDR-CQYNEILNE---HSLNFK 4186
Query: 323 HYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQ--SKDFLALGIHNGYAHVM 378
F + ++T + +R S +IL+T S S D+LAL + G+A ++
Sbjct: 4187 GNSFAAYGTPKVTKVNITLSVR-PASLEDSVILYTAESTLPSGDYLALVLRGGHAELL 4243
Score = 54 (24.1 bits), Expect = 1.3e-24, Sum P(4) = 1.3e-24
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 61 TPGSSY------CLCPLGFTGDLCQTRLDLQVPQFNGSSYL 95
TPG+++ C CP G+ G C++ L +GS L
Sbjct: 2767 TPGATHASDIELCQCPSGYVGTSCESCAPLHYRDASGSCSL 2807
Score = 52 (23.4 bits), Expect = 2.1e-24, Sum P(4) = 2.1e-24
Identities = 14/44 (31%), Positives = 18/44 (40%)
Query: 38 RSKECLEDKCNKTPCEH-GGKCITTP-GSSYCLCPLGFTGDLCQ 79
R C E C T + C +P G C C G+TG C+
Sbjct: 2106 RGVPCKECPCPLTGSNNFASGCQQSPDGDVVCRCNEGYTGRRCE 2149
Score = 51 (23.0 bits), Expect = 7.3e-25, Sum P(5) = 7.3e-25
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 67 CLCPLGFTGDLCQT 80
C CP G+ GD C++
Sbjct: 2058 CQCPPGYVGDSCES 2071
Score = 48 (22.0 bits), Expect = 7.3e-25, Sum P(5) = 7.3e-25
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 31 DGNKIKGRSKECLED----KCN--KTPCEHGGKCITTPGSSYC 67
DG GR+++ ED KC+ K C+ GG CI P S C
Sbjct: 863 DGIPDCGRNED--EDDALCKCSGDKYKCQRGGGCI--PKSQVC 901
Score = 39 (18.8 bits), Expect = 1.2e-23, Sum P(5) = 1.2e-23
Identities = 6/13 (46%), Positives = 8/13 (61%)
Query: 67 CLCPLGFTGDLCQ 79
C CP G+ G C+
Sbjct: 2429 CRCPEGYLGLSCE 2441
Score = 38 (18.4 bits), Expect = 1.5e-23, Sum P(5) = 1.5e-23
Identities = 14/40 (35%), Positives = 14/40 (35%)
Query: 67 CLCPLGFTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQYLS 106
CLC GD C D P G S G E Y S
Sbjct: 2548 CLCKRNVIGDQC----DQCRPGTYGLSAQNQDGCKECYCS 2583
Score = 38 (18.4 bits), Expect = 1.5e-22, Sum P(5) = 1.5e-22
Identities = 13/41 (31%), Positives = 15/41 (36%)
Query: 32 GNKIKGRSKECLEDKCNKTPCEHGGKCITTPGSSYCLCPLG 72
G KG L +KC P G C + S Y P G
Sbjct: 2043 GTADKGLGSASLVEKCQCPPGYVGDSCESC-ASGYVRQPGG 2082
>UNIPROTKB|F1NAT6 [details] [associations]
symbol:HSPG2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001958 "endochondral ossification" evidence=IEA]
[GO:0002062 "chondrocyte differentiation" evidence=IEA] [GO:0005605
"basal lamina" evidence=IEA] [GO:0005615 "extracellular space"
evidence=IEA] [GO:0007420 "brain development" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=IEA] [GO:0008104
"protein localization" evidence=IEA] [GO:0030198 "extracellular
matrix organization" evidence=IEA] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA] [GO:0048738 "cardiac muscle
tissue development" evidence=IEA] [GO:0060351 "cartilage
development involved in endochondral bone morphogenesis"
evidence=IEA] InterPro:IPR000742 InterPro:IPR007110 Pfam:PF00008
PROSITE:PS50026 PROSITE:PS50835 SMART:SM00181 GO:GO:0005615
GO:GO:0008104 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 GO:GO:0030198 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005605 PROSITE:PS01186
InterPro:IPR001791 Pfam:PF00054 SMART:SM00282 PROSITE:PS50025
GeneTree:ENSGT00530000063501 InterPro:IPR013098 Pfam:PF07679
Pfam:PF02210 EMBL:AADN02073465 IPI:IPI00577494
Ensembl:ENSGALT00000016492 OMA:MEVELEC Uniprot:F1NAT6
Length = 1213
Score = 285 (105.4 bits), Expect = 6.5e-21, Sum P(2) = 6.5e-21
Identities = 75/248 (30%), Positives = 118/248 (47%)
Query: 47 CNKTPCEHGGKCITTP-GSSY-CLCPLGFTGDLCQTRLDLQVPQFN-GSSYLRYQGLGEQ 103
C+ C CI+ P G Y C C LG G+ C + VP F+ +++ Y L
Sbjct: 906 CHPEACGPDATCISRPDGHGYSCRCHLGKMGERCTEGEAVSVPSFDEAGAFISYPPLTNV 965
Query: 104 YLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSN 163
+ L + F P+G+LL++ +A V DF+AL + +++F ++LG+G A LRS
Sbjct: 966 HHELR-VEAEFLPRAPDGLLLFSAGKASPVEDFVALAMVSGHLEFHYELGSGTAVLRSVE 1024
Query: 164 PISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSPK 223
P++LG WH++ R + + VD Q SPG GGV + P
Sbjct: 1025 PVALGRWHRVTAERVHKDGTMTVDGGAPVQRSSPGKSQGLNLRSPLYLGGVEPP--LRPP 1082
Query: 224 VKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNCAH--PCITQPC-GSGSCVPLYDG- 279
+SF GCI +V IN ++++ ++ V C PC+ PC G C+PL
Sbjct: 1083 TN--ASFQGCIGEVSINGKKVDLSYSFLRSRGVGQCGQSSPCLHAPCLHGGRCLPLPASS 1140
Query: 280 --YKCVCT 285
++C+CT
Sbjct: 1141 PPFRCLCT 1148
Score = 274 (101.5 bits), Expect = 2.4e-24, Sum P(2) = 2.4e-24
Identities = 72/206 (34%), Positives = 100/206 (48%)
Query: 86 VPQFNGS--SYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLND 143
VP F + S+L + + Y + ++ I F+ +G+LLYNG R DFI+ L
Sbjct: 690 VPYFTQTPRSFLPLPTIKDAYKTF-EIQITFRPDAADGMLLYNGQRKSSGADFISFGLVG 748
Query: 144 RYVDFTFDLGTGAATLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQX 203
+F FD G+G AT+R P+ LG++H +RL R LQVD P S G F
Sbjct: 749 GRPEFRFDAGSGMATIRDPTPLRLGQYHTVRLFRNLTRGSLQVDGQPPVNGTSQGKFQGL 808
Query: 204 XXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEA-IQGVNVVNCAHP 262
GG PDY IV+ K + F+GC++++ I N E+ GE +Q V NC
Sbjct: 809 DLNEELYLGGYPDYTIVA-KTGLSRGFVGCVRQLRIQNEEV-AFGELDLQAHGVSNCP-T 865
Query: 263 CITQPCGSGS-CVPLYDG-YKCVCTQ 286
C QPC +G C Y C C Q
Sbjct: 866 CQDQPCQNGGICEDAESSTYICRCPQ 891
Score = 94 (38.1 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 16/34 (47%), Positives = 20/34 (58%)
Query: 47 CNKTPCEHGGKCITTPGSSY-CLCPLGFTGDLCQ 79
C PC++GG C S+Y C CP GFTG C+
Sbjct: 866 CQDQPCQNGGICEDAESSTYICRCPQGFTGSNCE 899
Score = 86 (35.3 bits), Expect = 2.4e-24, Sum P(2) = 2.4e-24
Identities = 48/221 (21%), Positives = 86/221 (38%)
Query: 252 QGVNVVNCAHP----CITQPCG-SGSCVPLYDG--YKCVCTQSCKESHLTEVMCASFDHG 304
QG NC + C + CG +C+ DG Y C C TE S
Sbjct: 891 QGFTGSNCEYSQALHCHPEACGPDATCISRPDGHGYSCRCHLGKMGERCTEGEAVSV--- 947
Query: 305 ASFLHYLDPEIIHSSGLLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQS-- 362
P + + Y +V +E ++ + GL+L++ S
Sbjct: 948 --------PSFDEAGAFISYPPLTNVH-----HELRVEAEFLPRAPDGLLLFSAGKASPV 994
Query: 363 KDFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGVWHRLT---VHRNFMVVMHGSSHT 419
+DF+AL + +G+ Y + + G WHR+T VH++ + + G +
Sbjct: 995 EDFVALAMVSGHLEFHYELGSGTAVLRSVEP-VALGRWHRVTAERVHKDGTMTVDGGAPV 1053
Query: 420 RSNKSSKIEFKCLSIQR-LHRTGKQCLIRIDTDYSMQSISG 459
+ +SS + + L+++ L+ G + +R T+ S Q G
Sbjct: 1054 Q--RSSPGKSQGLNLRSPLYLGGVEPPLRPPTNASFQGCIG 1092
Score = 80 (33.2 bits), Expect = 1.0e-23, Sum P(2) = 1.0e-23
Identities = 29/86 (33%), Positives = 45/86 (52%)
Query: 432 LSIQRLHRTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVEDIEELTRSKYHHSF 491
++ +R+H+ G + +D +Q S GK + LN S LY+GGVE R + SF
Sbjct: 1034 VTAERVHKDGT---MTVDGGAPVQRSSPGKSQGLNLRSPLYLGGVEPP---LRPPTNASF 1087
Query: 492 KGWISNLILSNDYQVKLPLS--RSQG 515
+G I + + N +V L S RS+G
Sbjct: 1088 QGCIGEVSI-NGKKVDLSYSFLRSRG 1112
Score = 41 (19.5 bits), Expect = 6.5e-21, Sum P(2) = 6.5e-21
Identities = 9/39 (23%), Positives = 21/39 (53%)
Query: 2 VKSDNQVILDDWNTVRVFRHRWDAWIQLNDGNKIKGRSK 40
++ + L ++TVR+FR+ +Q++ + G S+
Sbjct: 764 IRDPTPLRLGQYHTVRLFRNLTRGSLQVDGQPPVNGTSQ 802
>UNIPROTKB|Q5T1H1 [details] [associations]
symbol:EYS "Protein eyes shut homolog" species:9606 "Homo
sapiens" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0050896 "response
to stimulus" evidence=IEA] [GO:0005576 "extracellular region"
evidence=IEA] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005576
GO:GO:0007601 GO:GO:0005509 GO:GO:0050896 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186 eggNOG:NOG12793
InterPro:IPR001791 Pfam:PF00054 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 Pfam:PF02210 CTD:346007 EMBL:FM209056 EMBL:FJ416331
EMBL:AY358133 EMBL:AL050329 EMBL:AL078597 EMBL:AL109612
EMBL:AL132767 EMBL:AL365217 EMBL:AL589916 EMBL:AL109922
EMBL:AL137007 EMBL:AL450324 EMBL:AL450394 EMBL:AL133322
EMBL:AL353669 EMBL:AL354913 EMBL:AL354719 EMBL:AL590546
EMBL:AL590784 EMBL:AL353153 EMBL:AL355357 EMBL:AL356454
EMBL:AL357375 EMBL:AL450319 EMBL:AL603767 EMBL:BC133011
EMBL:BC133013 IPI:IPI00375230 IPI:IPI00887249 IPI:IPI00923621
RefSeq:NP_001136272.1 RefSeq:NP_001136273.1 RefSeq:NP_938024.1
UniGene:Hs.25067 HSSP:P00743 ProteinModelPortal:Q5T1H1
IntAct:Q5T1H1 STRING:Q5T1H1 PhosphoSite:Q5T1H1 DMDM:226707571
PaxDb:Q5T1H1 PRIDE:Q5T1H1 Ensembl:ENST00000342421
Ensembl:ENST00000370616 Ensembl:ENST00000370618
Ensembl:ENST00000370621 Ensembl:ENST00000503581 GeneID:346007
KEGG:hsa:346007 UCSC:uc003per.1 UCSC:uc011dxt.1 UCSC:uc011dxu.1
GeneCards:GC06M064430 H-InvDB:HIX0025090 HGNC:HGNC:21555
HPA:HPA027103 MIM:602772 MIM:612424 neXtProt:NX_Q5T1H1
PharmGKB:PA164719488 InParanoid:A8MVE7 OMA:EITHAND
GenomeRNAi:346007 NextBio:98921 ArrayExpress:Q5T1H1 Bgee:Q5T1H1
Genevestigator:Q5T1H1 Uniprot:Q5T1H1
Length = 3165
Score = 259 (96.2 bits), Expect = 8.6e-22, Sum P(3) = 8.6e-22
Identities = 77/284 (27%), Positives = 131/284 (46%)
Query: 40 KECLEDKCNKTPCEHGGKCITTPGSSY-CLCPLGFTGDLCQTRLDLQVPQFNGS------ 92
K C C PC +G C+ G+ CLCP G +G LC +++ P+F+G+
Sbjct: 2368 KLCQFASCENNPCGNGATCVPKSGTDIVCLCPYGRSGPLCTDAINITQPRFSGTDAFGYT 2427
Query: 93 SYLRYQGLGE-----QYLSLLDLTIVFKAIEPNGILLYNGHRADGVG--DFIALYLNDRY 145
S+L Y + + ++ L A++ N ++ + G + G+ DF+A+ L +
Sbjct: 2428 SFLAYSRISDISFHYEFHLKFQLANNHSALQ-NNLIFFTGQKGHGLNGDDFLAVGLLNGS 2486
Query: 146 VDFTFDLGTGAATLRSSN-PISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXX 204
V ++++LG+G A++RS +SLG H + L + + +L+VD + I++PG
Sbjct: 2487 VVYSYNLGSGIASIRSEPLNLSLGV-HTVHLGKFFQEGWLKVDDHKNKSIIAPGRLVGLN 2545
Query: 205 XXXXXXXGGVPDY--NIVSPKVKIKSSFIGCIQKVLINNHE------L-NILGEAIQGVN 255
GG +Y +++ K+ F GCI + + + L N G G +
Sbjct: 2546 VFSQFYVGGYSEYTPDLLPNGADFKNGFQGCIFTLQVRTEKDGHFRGLGNPEGHPNAGRS 2605
Query: 256 VVNC-AHPCITQPCGSG-SCVPLYDGYKCVCTQSCKESHLTEVM 297
V C A PC CG+G +C+ C CT K S TE +
Sbjct: 2606 VGQCHASPCSLMKCGNGGTCIESGTSVYCNCTTGWKGSFCTETV 2649
Score = 169 (64.5 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 55/221 (24%), Positives = 96/221 (43%)
Query: 47 CNKTPCEHGGKCITTPGSSY-CLCPLGFTGDLCQTRLDLQVPQFNGSSYLRY--QGLGEQ 103
C C H CI SY CLC LG+ G C+ + +F G+SY++Y +
Sbjct: 2937 CLNNLCLHQSLCIPDQSFSYSCLCTLGWVGRYCENKTSFSTAKFMGNSYIKYIDPNYRMR 2996
Query: 104 YLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSN 163
L +++ F + G++++ G + DF+A+ L+++ + +LG + S N
Sbjct: 2997 NLQFTTISLNFSTTKTEGLIVWMGIAQNEENDFLAIGLHNQTLKIAVNLGERISVPMSYN 3056
Query: 164 --PISLGEWHKLRL--TRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDY-- 217
+WH + + +T AY+ S I F GG +Y
Sbjct: 3057 NGTFCCNKWHHVVVIQNQTLIKAYINNSLILSEDIDPHKNFVALNYDGICYLGGF-EYGR 3115
Query: 218 --NIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNV 256
NIV+ ++ K++F+G I+ V+ NI ++G NV
Sbjct: 3116 KVNIVTQEI-FKTNFVGKIKDVVFFQEPKNIELIKLEGYNV 3155
Score = 166 (63.5 bits), Expect = 2.0e-16, Sum P(4) = 2.0e-16
Identities = 68/261 (26%), Positives = 103/261 (39%)
Query: 47 CNKTPCEHGGKC---ITTPG--SSYCLCPLGFTGDLCQTRLDLQVPQFNGSSYLRYQGLG 101
C + C +GG C + G S C CPL FTG C+ L P FNG+SYL L
Sbjct: 2103 CQQDVCHNGGTCHAIFLSSGIVSFQCDCPLHFTGRFCEKDAGLFFPSFNGNSYLELPFLK 2162
Query: 102 ----EQYLSLLDLTIVFKAIEPNGILLY-NGHRADGVGDFIALYLNDRYVDFTFDLGTGA 156
+++ + + + K NG +LY NG+ F+ L+L + + G
Sbjct: 2163 FVLEKEHNRTVTIYLTIKTNSLNGTILYSNGNNCGK--QFLHLFLVEGRPSVKYGCGNSQ 2220
Query: 157 ATLR-SSN-PISLGEWHKLRLTRT------GRHAYLQV--DRFPSSQILSPG-PFTQXXX 205
L S+N I+ + + + T G +++ D P Q
Sbjct: 2221 NILTVSANYSINTNAFTPITIRYTTPVGSPGVVCMIEMTADGKPPVQKKDTEISHASQAY 2280
Query: 206 XXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNCAHP-CI 264
G +P + K F GCI + +NN E I+ EA G N+ NC P C
Sbjct: 2281 FESMFLGHIPANVQIHKKAGPVYGFRGCILDLQVNNKEFFIIDEARHGKNIENCHVPWCA 2340
Query: 265 TQPC-GSGSCVPLYDGYKCVC 284
C +G+C+ + C C
Sbjct: 2341 HHLCRNNGTCISDNENLFCEC 2361
Score = 164 (62.8 bits), Expect = 5.0e-18, Sum P(4) = 5.0e-18
Identities = 54/213 (25%), Positives = 91/213 (42%)
Query: 82 LDLQVPQFNGSSYLRYQGLGEQYL-SLLDLTIVFKAIEPNGILLYNG-HRADGVGDFIAL 139
L + P F S+ L + ++ + + F+ + +GIL Y H GDF+ +
Sbjct: 2713 LSISDPSFR-SNELSWMSFASFHVRKKTHIQLQFQPLAADGILFYAAQHLKAQSGDFLCI 2771
Query: 140 YLNDRYVDFTFDLGTGAATLRSSNPISLG--EWHKLRLTRTGRHAYLQVDRFPSSQILSP 197
L + V ++LG L + +++ WH ++ R G YL +D ++ S
Sbjct: 2772 SLVNSSVQLRYNLGDRTIILETLQKVTINGSTWHIIKAGRVGAEGYLDLDGINVTEKAST 2831
Query: 198 GPFTQXXXXXXXXXGGVPDYNIVSPKVKIKSS---FIGCIQKVLINNHELNILGEAIQG- 253
+ GGV N+V+P + I++ F GCI++V+INN EL + +G
Sbjct: 2832 -KMSSLDTNTDFYIGGVSSLNLVNP-MAIENEPVGFQGCIRQVIINNQELQLTEFGAKGG 2889
Query: 254 VNVVNC-AHPCITQPC-GSGSCVPLYDGYKCVC 284
NV +C C C G C + C C
Sbjct: 2890 SNVGDCDGTACGYNTCRNGGECTVNGTTFSCRC 2922
Score = 102 (41.0 bits), Expect = 5.0e-18, Sum P(4) = 5.0e-18
Identities = 20/49 (40%), Positives = 27/49 (55%)
Query: 40 KECLED--KCNKTPCEHGGKC--ITTPGSSYCLCPLGFTGDLCQTRLDL 84
+ C E+ +C+ PC +GG C T PG CLCP +TG C R +L
Sbjct: 804 QNCSEEINECDSDPCMNGGLCHESTIPGQFVCLCPPLYTGQFCHQRYNL 852
Score = 102 (41.0 bits), Expect = 5.0e-18, Sum P(4) = 5.0e-18
Identities = 34/125 (27%), Positives = 55/125 (44%)
Query: 255 NVVNCAHPCITQPCGSGS-CVPLYD-GYKCVCTQSCKESHLTEVMCASFDH--GASFLHY 310
N N + C+ C S C+P Y C+CT + S G S++ Y
Sbjct: 2929 NTCNQSVSCLNNLCLHQSLCIPDQSFSYSCLCTLGWVGRYCENKTSFSTAKFMGNSYIKY 2988
Query: 311 LDPEIIHSSGLLHYKFQLHVDFRITGYEFN-IDMRIKTSSSSGLILWTGSSQSK--DFLA 367
+DP ++R+ +F I + T+ + GLI+W G +Q++ DFLA
Sbjct: 2989 IDP-----------------NYRMRNLQFTTISLNFSTTKTEGLIVWMGIAQNEENDFLA 3031
Query: 368 LGIHN 372
+G+HN
Sbjct: 3032 IGLHN 3036
Score = 95 (38.5 bits), Expect = 1.2e-10, Sum P(4) = 1.2e-10
Identities = 47/193 (24%), Positives = 84/193 (43%)
Query: 83 DLQVPQFNGSSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGV-GDFIALYL 141
D ++ G SYL +Q + + ++++ F+ G+LLY ++ V G FI L++
Sbjct: 1882 DFSCVRYYGDSYLEFQNVALNPQN--NISLEFQTFSSYGLLLYVKQDSNLVDGFFIQLFI 1939
Query: 142 NDRYVDFTFDLGTGAATLRSSNP---ISLGEWHKL-----------RLTRTGRHAYLQVD 187
+ + + F G A +S N + G+ + L LT GR+ Q+
Sbjct: 1940 ENGTLKYHFYC-PGEAKFKSINTTVRVDNGQKYTLLIRQELDPCNAELTILGRNT--QIC 1996
Query: 188 RFPSSQILSPGPFTQXXXXXXXXXGGVPD-YNIVSPKVKIKSSFIGCIQKVLINNHELNI 246
+ + P P GG PD + + V +K+ F GCI+ + INN I
Sbjct: 1997 ESINHVLGKPLP-----KSGSVFIGGFPDLHGKIQMPVPVKN-FTGCIEVIEINNWRSFI 2050
Query: 247 LGEAIQGVNVVNC 259
+A++ ++ NC
Sbjct: 2051 PSKAVKNYHINNC 2063
Score = 89 (36.4 bits), Expect = 1.0e-16, Sum P(4) = 1.0e-16
Identities = 15/43 (34%), Positives = 24/43 (55%)
Query: 42 CLEDKCNKTPCEHGGKCITTPGSSY-CLCPLGFTGDLCQTRLD 83
C E + N C +GG C+ PG ++ C C GF+G C+ ++
Sbjct: 1121 CAEPELNSVICLNGGICVDGPGHTFDCRCLPGFSGQFCEININ 1163
Score = 89 (36.4 bits), Expect = 1.0e-16, Sum P(4) = 1.0e-16
Identities = 19/58 (32%), Positives = 28/58 (48%)
Query: 37 GRSKEC---LEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLD-LQVPQFN 90
G S +C + D C PC + G C + C+CP G+TG C+ +D P+ N
Sbjct: 1071 GTSTQCKIKIND-CTSIPCMNEGFCQKSAHGFTCICPRGYTGAYCEKSIDNCAEPELN 1127
Score = 83 (34.3 bits), Expect = 4.1e-16, Sum P(4) = 4.1e-16
Identities = 16/35 (45%), Positives = 18/35 (51%)
Query: 52 CEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQV 86
C G CI+ P C CPLG TG C+ L L V
Sbjct: 2662 CSRGATCISLPHGYTCFCPLGTTGIYCEQALILIV 2696
Score = 81 (33.6 bits), Expect = 2.0e-16, Sum P(4) = 2.0e-16
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 36 KGRSKECLEDKCNKTPCEHGGKCITTPGSSYCLC 69
KG E D+C PC++G CI PG+ +C C
Sbjct: 674 KGTQCEIDIDECASHPCKNGATCIDQPGNYFCQC 707
Score = 79 (32.9 bits), Expect = 2.0e-16, Sum P(4) = 2.0e-16
Identities = 38/152 (25%), Positives = 59/152 (38%)
Query: 263 CITQPCGSGS-CVPLYDGYKCVCTQSCKESHLTEVMCASFDHGASFLHYLDPEIIHSSGL 321
C PCG+G+ CVP G VC C + +C + + + + +
Sbjct: 2375 CENNPCGNGATCVPK-SGTDIVCL--CPYGR-SGPLCTDAIN-ITQPRFSGTDAFGYTSF 2429
Query: 322 LHYKFQLHVDFRITGYEFNIDMRIKTSSSS---GLILWTGSS----QSKDFLALGIHNGY 374
L Y + F YEF++ ++ + S+ LI +TG DFLA+G+ NG
Sbjct: 2430 LAYSRISDISFH---YEFHLKFQLANNHSALQNNLIFFTGQKGHGLNGDDFLAVGLLNGS 2486
Query: 375 AHVMYXXXXXXXXXXXXQTKINNGVWHRLTVH 406
Y ++ GV H TVH
Sbjct: 2487 VVYSYNLGSGIASIRSEPLNLSLGV-H--TVH 2515
Score = 78 (32.5 bits), Expect = 1.3e-15, Sum P(4) = 1.3e-15
Identities = 18/49 (36%), Positives = 22/49 (44%)
Query: 45 DKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLD--LQVPQFNG 91
D+C PC H G CI C C GF G C+T + L P +G
Sbjct: 1006 DECLSEPCLHDGVCIDGINHYTCDCKSGFFGTHCETNANDCLSNPCLHG 1054
Score = 76 (31.8 bits), Expect = 2.1e-15, Sum P(4) = 2.1e-15
Identities = 14/39 (35%), Positives = 19/39 (48%)
Query: 45 DKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLD 83
+KC +PC C+ CLC G+TG C+ LD
Sbjct: 968 NKCKISPCLDEENCVYRTDGYNCLCAPGYTGINCEINLD 1006
Score = 75 (31.5 bits), Expect = 2.6e-15, Sum P(4) = 2.6e-15
Identities = 12/39 (30%), Positives = 20/39 (51%)
Query: 45 DKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLD 83
++C+ +PC HG C C C G++G C+ L+
Sbjct: 1163 NECSSSPCLHGADCEDHINGYVCKCQPGWSGHHCENELE 1201
Score = 74 (31.1 bits), Expect = 3.3e-15, Sum P(4) = 3.3e-15
Identities = 19/64 (29%), Positives = 30/64 (46%)
Query: 37 GRSKE-CLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQFNGSSYL 95
G++ E C C C + G CI+ + +C CP ++G LCQ P NG++ +
Sbjct: 2328 GKNIENCHVPWCAHHLCRNNGTCISDNENLFCECPRLYSGKLCQFASCENNPCGNGATCV 2387
Query: 96 RYQG 99
G
Sbjct: 2388 PKSG 2391
Score = 69 (29.3 bits), Expect = 8.6e-22, Sum P(3) = 8.6e-22
Identities = 22/97 (22%), Positives = 45/97 (46%)
Query: 439 RTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVEDIEELTRSKYHHS---FKGWI 495
R G + + +D ++ + K L+T++ Y+GGV + + + F+G I
Sbjct: 2811 RVGAEGYLDLD-GINVTEKASTKMSSLDTNTDFYIGGVSSLNLVNPMAIENEPVGFQGCI 2869
Query: 496 SNLILSNDYQVKLPLSRSQGSSCQLTCETLNTGQVTC 532
+I++N +++L ++G S C+ G TC
Sbjct: 2870 RQVIINNQ-ELQLTEFGAKGGSNVGDCDGTACGYNTC 2905
Score = 69 (29.3 bits), Expect = 1.0e-14, Sum P(4) = 1.0e-14
Identities = 9/35 (25%), Positives = 18/35 (51%)
Query: 45 DKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQ 79
++C+ PC++ G C+ +C C + G C+
Sbjct: 930 NECSSEPCKNNGTCVDLTNRFFCNCEPEYHGPFCE 964
Score = 69 (29.3 bits), Expect = 1.0e-14, Sum P(4) = 1.0e-14
Identities = 17/53 (32%), Positives = 24/53 (45%)
Query: 31 DGNKIKGRSKECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLD 83
+GN + S EC K N PC++ C S C C G+TG C ++
Sbjct: 764 EGNFCEQESNEC---KMN--PCKNNSTCTDLYKSYRCECTSGWTGQNCSEEIN 811
Score = 68 (29.0 bits), Expect = 1.3e-14, Sum P(4) = 1.3e-14
Identities = 17/45 (37%), Positives = 23/45 (51%)
Query: 40 KECLE-DKCNKTPCEHGGKCITTPGS----SY-CLCPLGFTGDLC 78
K C E D C+ PC++ G CI + +Y C+C FTG C
Sbjct: 209 KYCQELDACSFKPCKNNGSCINKRENWDEQAYECVCHPPFTGKNC 253
Score = 67 (28.6 bits), Expect = 1.7e-14, Sum P(4) = 1.7e-14
Identities = 13/50 (26%), Positives = 24/50 (48%)
Query: 34 KIKGRSKECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLD 83
+ +G++ E C C+ G C + C+C GF+G LC+ ++
Sbjct: 881 EFEGKNCEIDVKDCLFLSCQDYGDCEDMVNNFRCICRPGFSGSLCEIEIN 930
Score = 66 (28.3 bits), Expect = 8.6e-22, Sum P(3) = 8.6e-22
Identities = 33/155 (21%), Positives = 57/155 (36%)
Query: 268 CGSGS-CVPLYDGYKCVCTQS-----CKESHLTEVMC-----ASFDHGASFLHYLDPEII 316
C G+ C+ L GY C C C+++ + V+ A L DP
Sbjct: 2662 CSRGATCISLPHGYTCFCPLGTTGIYCEQALILIVILEKPKPAERKVKKEALSISDPSF- 2720
Query: 317 HSSGLLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGS---SQSKDFLALGIHNG 373
S+ L F F + + +I ++ + ++ G++ + +QS DFL + + N
Sbjct: 2721 RSNELSWMSF---ASFHVRK-KTHIQLQFQPLAADGILFYAAQHLKAQSGDFLCISLVNS 2776
Query: 374 YAHVMYXXXXXXXXXXXXQ-TKINNGVWHRLTVHR 407
+ Y Q IN WH + R
Sbjct: 2777 SVQLRYNLGDRTIILETLQKVTINGSTWHIIKAGR 2811
Score = 65 (27.9 bits), Expect = 2.2e-05, Sum P(4) = 2.2e-05
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 253 GVNVVNCAHPCITQPCGSGSCVPLYDGYKCVC 284
G + A+ C++ PC G C L + Y C C
Sbjct: 1036 GTHCETNANDCLSNPCLHGRCTELINEYPCSC 1067
Score = 64 (27.6 bits), Expect = 1.8e-09, Sum P(4) = 1.8e-09
Identities = 33/119 (27%), Positives = 47/119 (39%)
Query: 263 CITQPC-GSGSCVPLYDGYKCVCTQSCKESHLTEVMCASFDHGASFLHYLDPEIIHSSGL 321
C C G+C ++ V Q H T C D G F + + L
Sbjct: 2103 CQQDVCHNGGTCHAIFLSSGIVSFQCDCPLHFTGRFCEK-DAGLFFPSFNGNSYLE---L 2158
Query: 322 LHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWT-GSSQSKDFLALGIHNGYAHVMY 379
KF L + T I + IKT+S +G IL++ G++ K FL L + G V Y
Sbjct: 2159 PFLKFVLEKEHNRT---VTIYLTIKTNSLNGTILYSNGNNCGKQFLHLFLVEGRPSVKY 2214
Score = 62 (26.9 bits), Expect = 5.3e-14, Sum P(4) = 5.3e-14
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 51 PCEHGGKCITTPGSSYCLCPLGFTGDLCQT 80
PC++G CI C+C FT LC++
Sbjct: 340 PCQNGTDCIKISNDVMCICSPIFTDLLCKS 369
Score = 59 (25.8 bits), Expect = 1.0e-13, Sum P(4) = 1.0e-13
Identities = 11/35 (31%), Positives = 15/35 (42%)
Query: 45 DKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQ 79
D C CEH C S C+C + G+ C+
Sbjct: 735 DDCILNACEHNSTCKDLHLSYQCVCLSDWEGNFCE 769
Score = 59 (25.8 bits), Expect = 1.0e-13, Sum P(4) = 1.0e-13
Identities = 14/42 (33%), Positives = 17/42 (40%)
Query: 40 KECLE--DKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQ 79
K C E +C C HG T S C C F+G C+
Sbjct: 251 KNCSEIIGQCQPHVCFHGNCSNITSNSFICECDEQFSGPFCE 292
Score = 57 (25.1 bits), Expect = 5.8e-06, Sum P(4) = 5.8e-06
Identities = 14/53 (26%), Positives = 22/53 (41%)
Query: 233 CIQKVLINNHELNILGEAIQGVNVVNCAHPCITQPCGS-GSCVPLYDGYKCVC 284
C+ V N H I E +G N C+ C G C + + ++C+C
Sbjct: 866 CLALVDANQH--CICREEFEGKNCEIDVKDCLFLSCQDYGDCEDMVNNFRCIC 916
Score = 56 (24.8 bits), Expect = 2.1e-13, Sum P(4) = 2.1e-13
Identities = 12/40 (30%), Positives = 18/40 (45%)
Query: 44 EDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLD 83
+D+ N+ C+H C C C L + G LC +D
Sbjct: 569 DDQENE--CQHEAVCKDEINRPRCSCSLSYIGRLCVVNVD 606
Score = 54 (24.1 bits), Expect = 3.3e-13, Sum P(4) = 3.3e-13
Identities = 19/57 (33%), Positives = 27/57 (47%)
Query: 52 CEHGGKCITTPGS-SY-CLCPLGFTGDLCQTRLD---LQVPQFNGSSYLRYQGLGEQ 103
C GKC++ S +Y C C F+G CQ LD + + NGS + + EQ
Sbjct: 183 CSGHGKCLSEAWSKTYSCHCQPPFSGKYCQ-ELDACSFKPCKNNGSCINKRENWDEQ 238
Score = 54 (24.1 bits), Expect = 0.00024, Sum P(4) = 0.00024
Identities = 10/23 (43%), Positives = 12/23 (52%)
Query: 263 CITQPC-GSGSCVPLYDGYKCVC 284
C PC +CV DGY C+C
Sbjct: 970 CKISPCLDEENCVYRTDGYNCLC 992
Score = 53 (23.7 bits), Expect = 4.2e-13, Sum P(4) = 4.2e-13
Identities = 16/58 (27%), Positives = 24/58 (41%)
Query: 44 EDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLD--LQVPQFNGSSYLRYQG 99
ED C C++G G + C GF G C+ +D P NG++ + G
Sbjct: 645 ED-CKSASCKNGTTSTHLRGYFFRKCVPGFKGTQCEIDIDECASHPCKNGATCIDQPG 701
Score = 53 (23.7 bits), Expect = 0.00030, Sum P(4) = 0.00030
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 263 CITQPC-GSGSCVPLYDGYKCVC 284
C ++PC +G+CV L + + C C
Sbjct: 932 CSSEPCKNNGTCVDLTNRFFCNC 954
Score = 52 (23.4 bits), Expect = 5.2e-13, Sum P(4) = 5.2e-13
Identities = 14/56 (25%), Positives = 21/56 (37%)
Query: 37 GRSKECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLD--LQVPQFN 90
G E + C PC HG +C C C T C+ +++ +P N
Sbjct: 1036 GTHCETNANDCLSNPCLHG-RCTELINEYPCSCDADGTSTQCKIKINDCTSIPCMN 1090
Score = 52 (23.4 bits), Expect = 2.2e-05, Sum P(4) = 2.2e-05
Identities = 19/72 (26%), Positives = 31/72 (43%)
Query: 340 NIDMRIKTSSSSGLILWTGS-SQSKD--FLALGIHNG-YAHVMYXXXXXXXXXXXXQTKI 395
NI + +T SS GL+L+ S D F+ L I NG + Y ++
Sbjct: 1906 NISLEFQTFSSYGLLLYVKQDSNLVDGFFIQLFIENGTLKYHFYCPGEAKFKSINTTVRV 1965
Query: 396 NNGVWHRLTVHR 407
+NG + L + +
Sbjct: 1966 DNGQKYTLLIRQ 1977
Score = 51 (23.0 bits), Expect = 6.6e-13, Sum P(4) = 6.6e-13
Identities = 8/30 (26%), Positives = 14/30 (46%)
Query: 51 PCEHGGKCIT-TPGSSYCLCPLGFTGDLCQ 79
PC + C+ + +C+C F G C+
Sbjct: 859 PCRNNSTCLALVDANQHCICREEFEGKNCE 888
Score = 51 (23.0 bits), Expect = 6.6e-13, Sum P(4) = 6.6e-13
Identities = 10/41 (24%), Positives = 15/41 (36%)
Query: 43 LEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLD 83
++ C P + C C C GFT C+ +D
Sbjct: 370 IQTSCESFPLRNNATCKKCEKDYPCSCISGFTEKNCEKAID 410
Score = 51 (23.0 bits), Expect = 6.6e-13, Sum P(4) = 6.6e-13
Identities = 25/78 (32%), Positives = 32/78 (41%)
Query: 35 IKGRSKECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQ---VPQ--F 89
I GR K C K PC K + C C + F G +CQ + Q V Q F
Sbjct: 428 IIGRFKYVCIPGCTKNPCWFL-KNVYLIHQHLCYCGVTFHG-ICQDKGPAQFEYVWQLGF 485
Query: 90 NGSSYLRYQGLGEQYLSL 107
GS + QG+ + Y L
Sbjct: 486 AGSEGEKCQGVIDAYFFL 503
Score = 49 (22.3 bits), Expect = 2.0e-14, Sum P(4) = 2.0e-14
Identities = 15/56 (26%), Positives = 27/56 (48%)
Query: 446 IRIDTDYSMQSISGGKFEQLNTDSGLYVGGVEDIE-EL--TRSKYHHSFKGWISNL 498
+++D + I+ G+ LN S YVGG + +L + + + F+G I L
Sbjct: 2525 LKVDDHKNKSIIAPGRLVGLNVFSQFYVGGYSEYTPDLLPNGADFKNGFQGCIFTL 2580
Score = 43 (20.2 bits), Expect = 5.0e-18, Sum P(4) = 5.0e-18
Identities = 12/41 (29%), Positives = 21/41 (51%)
Query: 462 FEQLNTDSGLYVGGVE---DIEELTRSKYHHSFKGWISNLI 499
F LN D Y+GG E + +T+ + +F G I +++
Sbjct: 3097 FVALNYDGICYLGGFEYGRKVNIVTQEIFKTNFVGKIKDVV 3137
>FB|FBgn0031414 [details] [associations]
symbol:eys "eyes shut" species:7227 "Drosophila melanogaster"
[GO:0005886 "plasma membrane" evidence=ISS;IDA] [GO:0005509
"calcium ion binding" evidence=IEA] [GO:0042052 "rhabdomere
development" evidence=IMP] [GO:0005615 "extracellular space"
evidence=IDA] [GO:0005201 "extracellular matrix structural
constituent" evidence=IMP] [GO:0000902 "cell morphogenesis"
evidence=IMP] [GO:0010378 "temperature compensation of the
circadian clock" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0016021
GO:GO:0005886 GO:GO:0005615 EMBL:AE014134 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0000902
PROSITE:PS01186 eggNOG:NOG312635 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 Pfam:PF02210 GO:GO:0042052
GO:GO:0005201 EMBL:DQ991915 EMBL:DQ780942 EMBL:AY119566
EMBL:BK003285 RefSeq:NP_001027571.2 UniGene:Dm.33636
ProteinModelPortal:A0A1F4 SMR:A0A1F4 STRING:A0A1F4 PaxDb:A0A1F4
PRIDE:A0A1F4 GeneID:3771890 KEGG:dme:Dmel_CG33955 CTD:346007
FlyBase:FBgn0031414 InParanoid:A0A1F4 OMA:QFQFSCG OrthoDB:EOG42BVQC
GenomeRNAi:3771890 NextBio:851642 Bgee:A0A1F4 GO:GO:0010378
Uniprot:A0A1F4
Length = 2176
Score = 229 (85.7 bits), Expect = 1.2e-18, Sum P(3) = 1.2e-18
Identities = 68/254 (26%), Positives = 116/254 (45%)
Query: 42 CLEDKCNKTPCEHGGKCITTPGSSY-CLCPLGFTGDLCQTRLDLQVPQFNGS-----SYL 95
C C PC++GG C+ PGS Y CLCPLG G C+ L++ +P F+GS S++
Sbjct: 1308 CEISVCEDNPCQYGGTCVQFPGSGYLCLCPLGKHGHYCEHNLEVALPSFSGSVNGLSSFV 1367
Query: 96 RYQ-GLGEQYLSLLDLTIVFKAIEPNGILLYNGHRA--DGVGDFIALYLNDRYVDFTFDL 152
Y + +Y L I+ + + +L + G D D +A+ Y+ T++L
Sbjct: 1368 AYTVPIPLEYSLELSFKILPQTMSQISLLAFFGQSGYHDEKSDHLAVSFIQGYIMLTWNL 1427
Query: 153 GTGAATLRSSNPISLG-----EWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXX 207
G G + + PI +++++ R GR A+L VD + SPG ++
Sbjct: 1428 GAGPRRIFTQKPIDFRLDAPRVPYEIKVGRIGRQAWLSVDGKFNITGRSPGSGSRMDVLP 1487
Query: 208 XXXXGG--VPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNCAHPCIT 265
GG + ++N + + + S F GCI V + ++ + + +GV C T
Sbjct: 1488 ILYLGGHEIANFNTLPHDLPLHSGFQGCIYDVQLKAGQVTVPLQETRGVRGRGVGQ-CGT 1546
Query: 266 QPCGSGSCVPLYDG 279
+ C +C +DG
Sbjct: 1547 RECHRHACQ--HDG 1558
Score = 146 (56.5 bits), Expect = 9.0e-08, Sum P(2) = 9.0e-08
Identities = 66/277 (23%), Positives = 119/277 (42%)
Query: 26 WIQLNDGNKIKGRSKECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQ 85
W L DG G + + N T K ITTP S + + L ++ + R
Sbjct: 1643 WPYLYDGGDKLGAKRSQMVSYRNFTKKLMPPKPITTPSSHFVMKLLN---EVEKQRSFSP 1699
Query: 86 VPQFNGSSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLY----NGHRADGVGDFIALYL 141
VP S+ + + Q+ ++ + + + G+LLY N ++ +G F++L L
Sbjct: 1700 VPLMGSKSFEEHHRV--QFF-FIEFQL--RPLSERGLLLYFGTLNNNQDKKIG-FVSLSL 1753
Query: 142 NDRYVDFTFDLGTGAATL-RSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPF 200
V+F + T+ RS +++GEWHK+++ + GR L V+ SS L+P
Sbjct: 1754 QGGVVEFRISGPSNHVTVVRSVRMLAIGEWHKIKMAQRGRWLTLWVEGSASSA-LAPSAE 1812
Query: 201 TQXXXXXXXXXGGVPDYNIVSPKVKIKS---SFIGCIQKVLINNHELNILGEA--IQGVN 255
GG+ D + + P I F GC++ ++++ + +L E ++ N
Sbjct: 1813 VLVEPDSLLYIGGLKDVSKL-PHNAISGFPIPFRGCVRGLVVSGTRI-VLNETNIVESRN 1870
Query: 256 VVNC-AHPCITQPCGSGSCVPLYDGYK--CVCTQSCK 289
+ +C C C SG L + + C+C + K
Sbjct: 1871 IRDCDGTACGGDSCESGGHCWLDEKLQPHCICPEYAK 1907
Score = 136 (52.9 bits), Expect = 6.4e-12, Sum P(3) = 6.4e-12
Identities = 37/137 (27%), Positives = 64/137 (46%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQFNGSSYLR---YQGLG-- 101
C K C +GG C+TT S C+C G LC+ + ++ F+G SY+ Y+ +G
Sbjct: 1022 CIKLGCYNGGTCVTTSEGSRCVCRFDRQGPLCELPIIIRNAAFSGDSYVSHRIYKDIGGH 1081
Query: 102 EQYLSLLDLTIVFKAIE--PNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATL 159
E ++L + I K NG+++ + G ++AL+L + F F G L
Sbjct: 1082 ESLDAVLPMHIQLKVRTRATNGLIMLAAAQGTKGGHYMALFLQKGLMQFQFSCGLQTMLL 1141
Query: 160 RS-SNPISLGEWHKLRL 175
P++ G H++ +
Sbjct: 1142 SELETPVNTG--HEITI 1156
Score = 125 (49.1 bits), Expect = 0.00086, P = 0.00086
Identities = 43/160 (26%), Positives = 71/160 (44%)
Query: 45 DKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQV-PQFNGSSYL-------- 95
+ C PC++ G+C+ S C CP G+ G C+ + P F G+SYL
Sbjct: 1915 ETCKLIPCKNNGRCLR---SGRCSCPNGWGGFYCEIAMSKPTTPSFRGNSYLILPPPRIP 1971
Query: 96 -----RYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTF 150
R L + + +++ F IEP+G+LL++ H F+ L L ++
Sbjct: 1972 MKDKRRGPSLYVRPREAIQVSLNFSTIEPDGLLLWSEHERS---KFLGLGLEAGHLKLAS 2028
Query: 151 DL-GTGAATLRS--SNPISLGEWHKLRLTRTGRHAYLQVD 187
+L G+ T+R+ S I+ G WH + LQ+D
Sbjct: 2029 NLLGSTNDTVRAPASGFIADGAWHWTSVLLDRSRLELQLD 2068
Score = 99 (39.9 bits), Expect = 1.5e-07, Sum P(4) = 1.5e-07
Identities = 18/49 (36%), Positives = 27/49 (55%)
Query: 45 DKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLD--LQVPQFNG 91
D+C +PC++GG C+ C CP GF+G C+ +D + P NG
Sbjct: 184 DECWSSPCQNGGTCVDGVAYYNCTCPEGFSGSNCEENVDECMSNPCQNG 232
Score = 97 (39.2 bits), Expect = 2.5e-07, Sum P(4) = 2.5e-07
Identities = 15/43 (34%), Positives = 26/43 (60%)
Query: 42 CLED--KCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRL 82
C E+ +C +PC++GG C+ + C CP+G+TG C+ +
Sbjct: 297 CQEEINECASSPCQNGGVCVDKLAAYACACPMGYTGINCEEEI 339
Score = 96 (38.9 bits), Expect = 6.4e-12, Sum P(3) = 6.4e-12
Identities = 17/57 (29%), Positives = 29/57 (50%)
Query: 222 PKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNCAH-PCITQPCGSGS-CVPL 276
P + S F GC+ + IN I G+A+ G + C C++ PC +G+ C+ +
Sbjct: 1224 PPAQSGSGFTGCLHTLRINGQAREIFGDALDGFGITECGSLACLSSPCRNGAACIKI 1280
Score = 94 (38.1 bits), Expect = 4.9e-07, Sum P(4) = 4.9e-07
Identities = 15/33 (45%), Positives = 22/33 (66%)
Query: 52 CEHGGKCITTPGSSY-CLCPLGFTGDLCQTRLD 83
C+HGG+CI PG + C CP G+ G +CQ ++
Sbjct: 270 CQHGGECIEGPGLEFTCDCPAGWHGRICQEEIN 302
Score = 81 (33.6 bits), Expect = 8.8e-06, Sum P(4) = 8.8e-06
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 45 DKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQV 86
D+C PC++GG C C C G+ G C+ LD+ V
Sbjct: 222 DECMSNPCQNGGLCRDRTNGYICTCQPGYLGSHCE--LDVAV 261
Score = 80 (33.2 bits), Expect = 2.7e-05, Sum P(3) = 2.7e-05
Identities = 31/146 (21%), Positives = 59/146 (40%)
Query: 263 CITQPC-GSGSCVPLYDGYKCVCTQSCKESHLTEVMCASFDHGASFLHYLDPEIIHSSGL 321
CI C G+CV +G +CVC ++ L E+ + S Y+ I G
Sbjct: 1022 CIKLGCYNGGTCVTTSEGSRCVCRFD-RQGPLCELPIIIRNAAFSGDSYVSHRIYKDIGG 1080
Query: 322 LHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSKD--FLALGIHNGYAHVMY 379
H + +I ++++T +++GLI+ + +K ++AL + G +
Sbjct: 1081 -HESLDAVLPM-------HIQLKVRTRATNGLIMLAAAQGTKGGHYMALFLQKGLMQFQF 1132
Query: 380 XXXXXXXXXXXXQTKINNGVWHRLTV 405
+T +N G H +T+
Sbjct: 1133 SCGLQTMLLSELETPVNTG--HEITI 1156
Score = 75 (31.5 bits), Expect = 3.3e-05, Sum P(4) = 3.3e-05
Identities = 18/38 (47%), Positives = 19/38 (50%)
Query: 47 CNKTPCEHGGKCITTPGSSY-CLCPLGFTGDLCQTRLD 83
C PC G CI SSY C C G+TG CQT D
Sbjct: 148 CLSNPCVFG-VCIDGLNSSYSCYCIDGYTGIQCQTNWD 184
Score = 73 (30.8 bits), Expect = 5.2e-05, Sum P(4) = 5.2e-05
Identities = 17/44 (38%), Positives = 21/44 (47%)
Query: 37 GRSKECLEDKCNKTP-CEHGGKCITTPGSSYCLCPLGFTGDLCQ 79
G E D+C P C +GG CI + C CP TG LC+
Sbjct: 370 GEKCEFQYDECQLGPRCMNGGVCIDGVDTFSCSCPPLLTGMLCE 413
Score = 70 (29.7 bits), Expect = 6.4e-12, Sum P(3) = 6.4e-12
Identities = 22/83 (26%), Positives = 41/83 (49%)
Query: 436 RLHRTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVE--DIEELTRS-KYHHSFK 492
++ R G+Q + +D +++ S G +++ LY+GG E + L H F+
Sbjct: 1454 KVGRIGRQAWLSVDGKFNITGRSPGSGSRMDVLPILYLGGHEIANFNTLPHDLPLHSGFQ 1513
Query: 493 GWISNLILSNDYQVKLPLSRSQG 515
G I ++ L QV +PL ++G
Sbjct: 1514 GCIYDVQLKAG-QVTVPLQETRG 1535
Score = 68 (29.0 bits), Expect = 1.2e-18, Sum P(3) = 1.2e-18
Identities = 30/164 (18%), Positives = 64/164 (39%)
Query: 341 IDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTK--INNG 398
+ + T GL+LW+ +SK FL LG+ G+ + I +G
Sbjct: 1991 VSLNFSTIEPDGLLLWSEHERSK-FLGLGLEAGHLKLASNLLGSTNDTVRAPASGFIADG 2049
Query: 399 VWHRLTVHRNFMVVMHGSSHTRSNKSSKIEFKCLSIQRLHRTGKQCLIRID-TDYSMQSI 457
WH +V + RS +++ + + +RL G+ + + +
Sbjct: 2050 AWHWTSVLLD-----------RSRLELQLDGEVIFTERLPEGGRSLGSTTPRSTLAGRRK 2098
Query: 458 SGGKFEQLNTDSGLYVGGV---EDIEELTRSKYHHSFKGWISNL 498
+ K ++ + Y+GG + + T+ ++ FKG + ++
Sbjct: 2099 NSSKEPTISYEDVFYLGGFPNSDSVSRRTKGRFFDPFKGCLQDI 2142
Score = 65 (27.9 bits), Expect = 0.00030, Sum P(4) = 0.00030
Identities = 10/37 (27%), Positives = 17/37 (45%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLD 83
C PC++ C+ G C C + G+ C+ + D
Sbjct: 342 CADNPCQNNALCLMEEGVPTCYCVPDYHGEKCEFQYD 378
Score = 64 (27.6 bits), Expect = 1.2e-18, Sum P(3) = 1.2e-18
Identities = 15/34 (44%), Positives = 18/34 (52%)
Query: 259 CAHPCITQPCGS--------GSCVPLYDGYKCVC 284
CA P T PC S +CVPL +GY+C C
Sbjct: 1580 CAQP--TNPCDSFNNKCYEDATCVPLVNGYECDC 1611
Score = 59 (25.8 bits), Expect = 1.8e-18, Sum P(4) = 1.8e-18
Identities = 13/37 (35%), Positives = 23/37 (62%)
Query: 468 DSGLYVGGVEDIEELTR---SKYHHSFKGWISNLILS 501
DS LY+GG++D+ +L S + F+G + L++S
Sbjct: 1818 DSLLYIGGLKDVSKLPHNAISGFPIPFRGCVRGLVVS 1854
Score = 50 (22.7 bits), Expect = 1.8e-18, Sum P(4) = 1.8e-18
Identities = 15/70 (21%), Positives = 29/70 (41%)
Query: 339 FNIDMRIKTSSSSGLILWTGS---SQSKD--FLALGIHNGYAHVMYXXXXXXXXXXXXQT 393
F I+ +++ S GL+L+ G+ +Q K F++L + G
Sbjct: 1717 FFIEFQLRPLSERGLLLYFGTLNNNQDKKIGFVSLSLQGGVVEFRISGPSNHVTVVRSVR 1776
Query: 394 KINNGVWHRL 403
+ G WH++
Sbjct: 1777 MLAIGEWHKI 1786
Score = 40 (19.1 bits), Expect = 6.8e-09, Sum P(3) = 6.8e-09
Identities = 12/44 (27%), Positives = 21/44 (47%)
Query: 490 SFKGWISNLILSNDYQVKLPLSRSQGSSCQLTCETLNTGQVTCF 533
SF G ++ L Y V +PL S S ++ +T++ + F
Sbjct: 1355 SFSGSVNGLSSFVAYTVPIPLEYSLELSFKILPQTMSQISLLAF 1398
>UNIPROTKB|F1NAE5 [details] [associations]
symbol:CNTNAP1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007155 "cell adhesion" evidence=IEA]
[GO:0002175 "protein localization to paranode region of axon"
evidence=IEA] [GO:0007010 "cytoskeleton organization" evidence=IEA]
[GO:0008076 "voltage-gated potassium channel complex" evidence=IEA]
[GO:0008088 "axon cargo transport" evidence=IEA] [GO:0030913
"paranodal junction assembly" evidence=IEA] [GO:0033270 "paranode
region of axon" evidence=IEA] [GO:0048812 "neuron projection
morphogenesis" evidence=IEA] [GO:0050884 "neuromuscular process
controlling posture" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] InterPro:IPR000421
InterPro:IPR000742 Pfam:PF00008 PROSITE:PS01286 PROSITE:PS50022
PROSITE:PS50026 SMART:SM00181 INTERPRO:IPR002181 GO:GO:0007165
GO:GO:0007010 GO:GO:0008088 GO:GO:0007155 GO:GO:0008076
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 InterPro:IPR008979 SUPFAM:SSF49785
InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025 Gene3D:3.90.215.10
InterPro:IPR014716 Pfam:PF00147 SMART:SM00186 SUPFAM:SSF56496
PROSITE:PS51406 GO:GO:0033270 Pfam:PF02210 GO:GO:0002175
OMA:RHDLHYH GeneTree:ENSGT00560000076804 EMBL:AADN02068681
IPI:IPI00578954 Ensembl:ENSGALT00000004939 Uniprot:F1NAE5
Length = 986
Score = 225 (84.3 bits), Expect = 1.4e-18, Sum P(2) = 1.4e-18
Identities = 84/314 (26%), Positives = 144/314 (45%)
Query: 108 LDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLND-RYVDFTFDLGTGAA--TLRSSNP 164
LD++ FK P+G+ L N G ++I + LN R V F +D+G G T+RS+ P
Sbjct: 684 LDISFYFKTTAPSGVFLEN----PGTQNYIRVELNTTRDVVFAYDIGNGHENLTVRSAVP 739
Query: 165 ISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSPKV 224
+ EWH+++ + A L+VDR P ++ P P Q P Y + S +
Sbjct: 740 WNDDEWHQVKAELNVKLARLRVDRLP--WVVRPAP-PQSFVRLEFDR---PLY-VGSAEH 792
Query: 225 KIKSSFIGCIQKVLINNHELNILGEA--IQGVNVVNCAHPCITQP--C-GSGSCVPLYDG 279
K++ F+GC++ + +N LN+ G+A +GV V NC C P C SG CV Y
Sbjct: 793 KMRP-FLGCLRALRMNGVTLNLEGKANETEGVQV-NCTGHCQDPPVPCQNSGLCVERYSH 850
Query: 280 YKCVCTQSCKESHLTEVMCAS-FDHGASFLHYLDPEIIHSS----GLLHYKFQLHVDFRI 334
Y C C+ S + F+ GA + + P ++++ ++ +Q + +
Sbjct: 851 YSCNCSISAFDGPFCNYDIGGYFEEGAWVRYNILPMSLYAAREFASIVSSPWQPLPGYNL 910
Query: 335 TGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHN-GYAHVMYXXXXXXXXXXXXQT 393
T E + T+S+ ++L+ SS KD++A+ I + G + Y
Sbjct: 911 TNEE--VSFSFSTTSAPAVLLYV-SSFVKDYMAVLIKDDGSLQLRYQLGTSPYVFALTTK 967
Query: 394 KINNGVWHRLTVHR 407
+ +G H + + R
Sbjct: 968 PVTDGRPHHVNITR 981
Score = 81 (33.6 bits), Expect = 1.4e-18, Sum P(2) = 1.4e-18
Identities = 13/41 (31%), Positives = 21/41 (51%)
Query: 43 LEDKCNKTPCEHGGKCITTPGSSYCLCPL-GFTGDLCQTRL 82
+ D+C CEH +C+ + C+C L G+ G+ C L
Sbjct: 417 ITDRCTPNLCEHDSRCVQSWDDFMCICDLTGYKGETCHKSL 457
>ZFIN|ZDB-GENE-091113-51 [details] [associations]
symbol:si:ch211-122m3.1 "si:ch211-122m3.1"
species:7955 "Danio rerio" [GO:0007155 "cell adhesion"
evidence=IEA] InterPro:IPR000421 InterPro:IPR000742 Pfam:PF00754
PROSITE:PS50022 PROSITE:PS50026 SMART:SM00181 SMART:SM00231
INTERPRO:IPR002181 ZFIN:ZDB-GENE-091113-51 GO:GO:0007165
GO:GO:0007155 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 InterPro:IPR008979
SUPFAM:SSF49785 InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025
SUPFAM:SSF56496 PROSITE:PS51406 Pfam:PF02210
GeneTree:ENSGT00560000076804 EMBL:AL929541 EMBL:CU464112
IPI:IPI00487171 Ensembl:ENSDART00000097695 Uniprot:E7F9H3
Length = 1300
Score = 213 (80.0 bits), Expect = 2.0e-17, Sum P(2) = 2.0e-17
Identities = 93/363 (25%), Positives = 159/363 (43%)
Query: 89 FNG-SSYLRYQGL-GEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLND-RY 145
FN +SYL + GE LS D++ +FK +G+ L N G DFI + L+
Sbjct: 788 FNKETSYLHFPTFHGE--LSA-DISFLFKTSSSSGVFLENL----GFKDFIRIELSSPTE 840
Query: 146 VDFTFDLGTGAATLRSSNPISLGE--WHKLRLTRTGRHAYLQVDRFPSSQILSPGP-FTQ 202
V F+FD+G G +R P +L + WH +R R + A L VD+ P++ +P
Sbjct: 841 VVFSFDVGNGPLDVRVQTPSALNDERWHHVRAERNVKEASLCVDQHPAAVQKAPADGHIH 900
Query: 203 XXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAI--QGVNVVNCA 260
GG + F+GCI+ + +N L++ A GV+ C
Sbjct: 901 LQLNSQLFVGGTASR---------QKGFLGCIRSLKLNGRTLDLEERAAITPGVSA-GCP 950
Query: 261 HPCITQP--C-GSGSCVPLYDGYKCVCTQS-CKESHLTEVMCASFDHGASFLH-YLDPEI 315
C + C GSCV Y G+ C C+ S + + + A F G S + + +P
Sbjct: 951 GHCSSYGGLCLNHGSCVEKYSGFTCDCSLSPFTGTFCHKELSAFFKPGTSVTYTFKEPYE 1010
Query: 316 IHSSGLLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIH-NGY 374
++ + + ++ D + G NI + +TS + L+L+ +S +++L++ ++ NG+
Sbjct: 1011 LNRN-ISAQSSSIYSDLTLRGE--NISLSFRTSQAPALLLYV-NSYYREYLSILLNRNGH 1066
Query: 375 AHVMYXXXXXXXXXXXXQTKIN--NGVWHRLTVHRNFMVV-MHGSSHTRS--NKSSKIEF 429
V Y + N NG HR++V R + + H + N +S EF
Sbjct: 1067 LDVKYKLAHSREAEVFRASGRNLANGQLHRVSVQRLAETLSIQVDQHEKEEFNLTSDTEF 1126
Query: 430 KCL 432
+
Sbjct: 1127 NAI 1129
Score = 86 (35.3 bits), Expect = 2.0e-17, Sum P(2) = 2.0e-17
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 45 DKCNKTPCEHGGKCITTPGSSYCLCPL-GFTGDLCQTRL 82
D+C+ CEHGGKC + + +C C G++G C + +
Sbjct: 542 DRCSPNHCEHGGKCSQSWSTFHCNCSATGYSGATCHSSI 580
>FB|FBgn0038975 [details] [associations]
symbol:Nrx-1 "Neurexin 1" species:7227 "Drosophila
melanogaster" [GO:0005886 "plasma membrane" evidence=IDA;NAS]
[GO:0007268 "synaptic transmission" evidence=IDA] [GO:0050808
"synapse organization" evidence=IDA] [GO:0008306 "associative
learning" evidence=IDA] [GO:0007416 "synapse assembly"
evidence=IDA] [GO:0031594 "neuromuscular junction" evidence=IDA]
InterPro:IPR000742 Pfam:PF00008 PROSITE:PS50026 SMART:SM00181
EMBL:AE014297 GO:GO:0005886 GO:GO:0007268 GO:GO:0031594
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0007416 GO:GO:0008306 InterPro:IPR001791
SMART:SM00282 PROSITE:PS50025 Pfam:PF02210
GeneTree:ENSGT00560000076996 OMA:NAYACEC CTD:42646 EMBL:BT023898
RefSeq:NP_001163687.1 UniGene:Dm.1980 STRING:Q3KN41
EnsemblMetazoa:FBtr0301485 GeneID:42646 KEGG:dme:Dmel_CG7050
FlyBase:FBgn0038975 GenomeRNAi:42646 NextBio:829856 Uniprot:Q3KN41
Length = 1840
Score = 252 (93.8 bits), Expect = 2.5e-17, Sum P(2) = 2.5e-17
Identities = 84/324 (25%), Positives = 152/324 (46%)
Query: 97 YQGLG--EQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGT 154
Y GL + Y S+ + FK +EPNG+L++NG R + DF+A+ L + ++ +TFDLG
Sbjct: 992 YVGLAMLKAYNSI-SIDFRFKTVEPNGLLVFNGGRRN---DFVAVELVNGHIHYTFDLGD 1047
Query: 155 GAATLRSSNPISLGE--WHKLRLTRTGRHAY-LQVDRFPSSQILS-PGPFTQXXXXXXXX 210
G T+R + I + + WH++ + R G + L VD S +I+S G
Sbjct: 1048 GPVTMRDKSRIHMNDNRWHQVSIRRPGPKTHTLTVD--DSFEIISLTGNNMHLELAGILY 1105
Query: 211 XGGV-PD-YNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVV--NCAHP--CI 264
GGV D Y+ + + +S F GC+ + + + ++ +A+ ++V C P C
Sbjct: 1106 IGGVFKDMYSKLPASISSRSGFEGCLASLDLGDASPSLTSDAVVPSSLVVSGCEGPTKCS 1165
Query: 265 TQPCGS-GSCVPLYDGYKCVCTQSCKESHLTEVMCASFDHGASFLHYLDPEIIHSSGLLH 323
C + G+CV ++ Y C C + S+ T C +D ++ E ++ G++
Sbjct: 1166 QNACANRGNCVQQWNAYACECDMT---SY-TGPTC--YDESIAY------EFGNNKGMVQ 1213
Query: 324 YKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXX 383
Y F + + E NI + T+ ++L S+ ++D++ L I G ++Y
Sbjct: 1214 YTFPENA--QADTEEDNIALGFITTRPDAVLLRVESATTQDYMELEIVEGNIFMVYNIGS 1271
Query: 384 XXXXXXXXQTKINNGVWHRLTVHR 407
TK+N+ +H + R
Sbjct: 1272 VDLPLGEIGTKVNDNAYHVVRFQR 1295
Score = 188 (71.2 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 88/355 (24%), Positives = 149/355 (41%)
Query: 110 LTIVFKAIEPNGIL-LYNGHRADGVGD--FIALYLNDRYVDFTFDLGTGAATLRSSNP-I 165
++ F+ EPNGI+ L G + + IA+ L + ++ DLG+GA+ +R+S +
Sbjct: 578 ISFKFRTKEPNGIIVLATGSKQPRAKNPVLIAIELLNGHIYIHLDLGSGASKVRASRRRV 637
Query: 166 SLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGV-PDYNIVS-PK 223
G+WH L L R GR A + VD + +PG T GGV P YN VS P
Sbjct: 638 DDGDWHDLILRRNGRDAKVSVDGV-WNDFRTPGDGTILELDGHMYLGGVGPAYNSVSWPA 696
Query: 224 V----KIKSSFIGCIQKVLINNHELNILGEA-IQGVNVV--NC---AHPCITQPC-GSGS 272
++ F+GC++ ++++ ++I A +Q V +C A+ C PC G+
Sbjct: 697 AIWTATLRQGFVGCLRDLVLSGKAIDIAAFARVQDSASVKPSCHVQANVCNGNPCLNGGT 756
Query: 273 CVPLYDGYKCVCTQSCKESHLTEVMCASFDHGASFLHYLDPEIIHSSGLLHYKFQLHVDF 332
C+ ++ C C+ + A+ S ++ + + G K Q
Sbjct: 757 CLEGWNRPICDCSATLYGGPTCGRELATLAFNGS--QHMTIWLGNGQGT---KTQTE--- 808
Query: 333 RITGYEFNIDMRIKTSSSSGLILWTGS-SQSKDFLALGIHNGYAHVMYXXXXXXXXXXXX 391
+ +R KTS +GL+L T + S S D L + + G
Sbjct: 809 -------ELVIRFKTSRPAGLLLLTSAESNSPDRLEIALVAGRVRASVRLSDREKNLLAG 861
Query: 392 QTKINNGVWHRLTVHR---NFMVVMHGSSHTRSNKSSKI--EFKCLSIQRLHRTG 441
Q+ +N+ WH + R N + + G+ R S I + I+ +H G
Sbjct: 862 QSVLNDNNWHTIRFSRRASNLRLQVDGAPPVRGMLSETILGRHSTMEIRSVHLGG 916
Score = 187 (70.9 bits), Expect = 2.0e-14, Sum P(3) = 2.0e-14
Identities = 67/248 (27%), Positives = 106/248 (42%)
Query: 45 DKCNKT-PCEHGGKCITTPGSSYCLCP-LGFTGDLCQTRLDLQVPQFNGSSYLRYQGLG- 101
D C + PC+HGG CI+T C C L + G C+ F G+ +L Y LG
Sbjct: 311 DACERNDPCQHGGICISTDSGPICECRNLEYDGQYCEKEKAPSEATFRGTQFLSYD-LGQ 369
Query: 102 ---EQYLSLLD-LTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAA 157
E +S D ++ F+ +PNG+L Y GH G D++ L L D V T L G
Sbjct: 370 TGAEPIVSAQDAISFYFRTRQPNGLLFYTGH---GT-DYLNLALRDGGVSLTMGLANGKQ 425
Query: 158 TLR-SSNPISLGE--WHKLRLTRTGRH-----AYLQ----VDRFPSSQILSPGPFTQXXX 205
+ + + + WHK+ + R + ++ + VD + G FT
Sbjct: 426 EMHIKPSKVRFDDHQWHKVTVHRRIQEISSITSFCRLVTVVDDVYTDHSHIAGKFTMLSS 485
Query: 206 XXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNH--ELNILGEAIQGVNVVNCAHPC 263
G V ++ +V ++F+GC++KV + LN++ A G ++ A
Sbjct: 486 SRVYVGGAVNPRALLGARVH--TNFVGCLRKVEFSADTLNLNLIDLAKSGSKLIQVAGNL 543
Query: 264 ITQPCGSG 271
Q C SG
Sbjct: 544 EYQ-CPSG 550
Score = 114 (45.2 bits), Expect = 4.3e-07, Sum P(3) = 4.3e-07
Identities = 38/138 (27%), Positives = 61/138 (44%)
Query: 110 LTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSNPISLGE 169
L + FK +PNG++LY G DF L L + + ++LG GA + + G
Sbjct: 128 LELEFKTEQPNGLVLYTDD--GGTYDFFELKLVEGALRLRYNLGGGAQIITVGRELHDGH 185
Query: 170 WHKLRLTRTGRHAYLQVDRFPSSQILSPGP---FTQXXXXXXXXXGGVPD-YN-----IV 220
WHK+++ R L VD S Q + G F + GG+P+ Y+ +
Sbjct: 186 WHKVQVLRNDEQTSLIVDGV-SQQRSTKGKEFQFGKFASNSDVYVGGMPNWYSSKLALLA 244
Query: 221 SPKVKIKSSFIGCIQKVL 238
P V + F G I+ ++
Sbjct: 245 LPSVIFEPRFRGAIRNLV 262
Score = 87 (35.7 bits), Expect = 2.0e-14, Sum P(3) = 2.0e-14
Identities = 21/79 (26%), Positives = 41/79 (51%)
Query: 335 TGYEFNIDMRIKTSSSSGLI-LWTGSSQ--SKD--FLALGIHNGYAHVMYXXXXXXXXXX 389
TG + +I + +T +G+I L TGS Q +K+ +A+ + NG+ ++
Sbjct: 572 TGKQSSISFKFRTKEPNGIIVLATGSKQPRAKNPVLIAIELLNGHIYIHLDLGSGASKVR 631
Query: 390 XXQTKINNGVWHRLTVHRN 408
+ ++++G WH L + RN
Sbjct: 632 ASRRRVDDGDWHDLILRRN 650
Score = 71 (30.1 bits), Expect = 4.3e-07, Sum P(3) = 4.3e-07
Identities = 19/82 (23%), Positives = 35/82 (42%)
Query: 341 IDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTKI--NNG 398
I +T +GL+ +TG D+L L + +G + +K+ ++
Sbjct: 382 ISFYFRTRQPNGLLFYTG--HGTDYLNLALRDGGVSLTMGLANGKQEMHIKPSKVRFDDH 439
Query: 399 VWHRLTVHRNFMVVMHGSSHTR 420
WH++TVHR + +S R
Sbjct: 440 QWHKVTVHRRIQEISSITSFCR 461
Score = 68 (29.0 bits), Expect = 4.3e-07, Sum P(3) = 4.3e-07
Identities = 18/56 (32%), Positives = 29/56 (51%)
Query: 448 IDTDYSMQSISGGKFEQLNTDSGLYVGGVEDIEELTRSKYHHSFKGWISNLILSND 503
+D Y+ S GKF L++ S +YVGG + L ++ H +F G + + S D
Sbjct: 466 VDDVYTDHSHIAGKFTMLSS-SRVYVGGAVNPRALLGARVHTNFVGCLRKVEFSAD 520
Score = 47 (21.6 bits), Expect = 2.5e-17, Sum P(2) = 2.5e-17
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 32 GNKIKGRSKECLEDKCNKTPCEHG 55
G+ + K+ + KC PC+HG
Sbjct: 269 GSTRRQEIKQQRDIKCGDVPCDHG 292
Score = 45 (20.9 bits), Expect = 4.0e-17, Sum P(2) = 4.0e-17
Identities = 10/39 (25%), Positives = 21/39 (53%)
Query: 7 QVILDD--WNTVRVFRHRWDAWIQLNDGNKIKGRSKECL 43
Q +L+D W+T+R R + +Q++ ++G E +
Sbjct: 862 QSVLNDNNWHTIRFSRRASNLRLQVDGAPPVRGMLSETI 900
>ZFIN|ZDB-GENE-081105-126 [details] [associations]
symbol:cntnap5a "contactin associated protein-like
5a" species:7955 "Danio rerio" [GO:0007155 "cell adhesion"
evidence=IEA] InterPro:IPR000421 InterPro:IPR000742 Pfam:PF00754
PROSITE:PS01285 PROSITE:PS50022 PROSITE:PS50026 SMART:SM00181
SMART:SM00231 INTERPRO:IPR002181 ZFIN:ZDB-GENE-081105-126
GO:GO:0007165 GO:GO:0007155 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 InterPro:IPR008979
SUPFAM:SSF49785 InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025
SMART:SM00186 SUPFAM:SSF56496 PROSITE:PS51406 Pfam:PF02210
GeneTree:ENSGT00560000076804 EMBL:CR392363 EMBL:BX957274
IPI:IPI00890469 Ensembl:ENSDART00000112295 ArrayExpress:F1RCQ5
Bgee:F1RCQ5 Uniprot:F1RCQ5
Length = 1306
Score = 224 (83.9 bits), Expect = 3.4e-17, Sum P(2) = 3.4e-17
Identities = 92/326 (28%), Positives = 149/326 (45%)
Query: 66 YCLCPLGFTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLY 125
Y + PL +GD L V + +SYL++ L + LSL D++ FK P+G+ L
Sbjct: 780 YVVGPLQCSGD---KSLWNAVSFYQAASYLQFASLQAE-LSL-DVSFFFKTASPSGVFLE 834
Query: 126 NGHRADGVGDFIALYLND-RYVDFTFDLGTGAATLRSSNPISLGE--WHKLRLTRTGRHA 182
N G+ DFI + L+ V F+F++G G L +P+ L + WH +R R + A
Sbjct: 835 N----IGLHDFIRVELSSPTAVTFSFNVGDGPVVLTVKSPVPLNDRQWHWVRAERNVKEA 890
Query: 183 YLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLIN-- 240
LQVD+ P I +P P G + V + F+GCI+ +N
Sbjct: 891 CLQVDQLPLRIIETP-P----DGHLRLQLG---NQLFVGGTATRQRGFLGCIRAFNMNGV 942
Query: 241 NHELNILGEAIQGVNVVNCAHPCITQP--CGS-GSCVPLYDGYKCVCTQSCKES-HLTEV 296
N +L + GV+ CA C + C + G CV GY C CT S TE
Sbjct: 943 NFDLEERAKVTPGVSS-GCAGHCSSSAGLCHNRGKCVEKSSGYMCDCTNSAYGGPSCTEE 1001
Query: 297 MCASFDHGASFLH-YLDP-EIIHSSGLLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLI 354
+ SF+ GAS + + +P +I + L V + + N+ + +T+ S ++
Sbjct: 1002 VSMSFERGASVTYIFQEPFSVIQNRSAA----VLSVPSQYSKSRDNMALSFQTTQSPAML 1057
Query: 355 LWTGSSQSKDFLALGI-HNGYAHVMY 379
L T ++ S+ ++A+ + NG + Y
Sbjct: 1058 L-TVNTLSQQYVAVILARNGSLQIWY 1082
Score = 72 (30.4 bits), Expect = 3.4e-17, Sum P(2) = 3.4e-17
Identities = 14/37 (37%), Positives = 19/37 (51%)
Query: 43 LEDKCNKTPCEHGGKCITTPGSSYCLCP-LGFTGDLC 78
+ D+C CEHG +C T S C C G++G C
Sbjct: 550 IRDRCLYNFCEHGSRCSQTWSSFSCDCSGTGYSGATC 586
>UNIPROTKB|D0PRN3 [details] [associations]
symbol:D0PRN3 "Neurexin-3" species:9031 "Gallus gallus"
[GO:0007416 "synapse assembly" evidence=IEA] [GO:0004872 "receptor
activity" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR000742 InterPro:IPR027149
Pfam:PF00008 PROSITE:PS50026 SMART:SM00181 InterPro:IPR000152
GO:GO:0016021 GO:GO:0046872 GO:GO:0007155 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 Pfam:PF02210 InterPro:IPR003585
SMART:SM00294 eggNOG:NOG302266 KO:K07377 EMBL:EU702428
IPI:IPI00571879 RefSeq:NP_001258852.1 RefSeq:XP_421297.3
UniGene:Gga.55565 UniGene:Gga.5608 ProteinModelPortal:D0PRN3
GeneID:423385 KEGG:gga:423385 CTD:9369 PANTHER:PTHR10127:SF405
Uniprot:D0PRN3
Length = 1693
Score = 205 (77.2 bits), Expect = 6.7e-17, Sum P(2) = 6.7e-17
Identities = 79/327 (24%), Positives = 138/327 (42%)
Query: 92 SSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFD 151
SSYL L + Y S+ L FK +G +L+N DG DFIA+ L Y+ + FD
Sbjct: 898 SSYLSLATL-QAYTSM-HLFFQFKTTSADGFILFNS--GDG-NDFIAVELVKGYIHYVFD 952
Query: 152 LGTGAATLR--SSNPISLGEWHKLRLTRTGRHAY-LQVDRFPSSQILSPGPFTQXXXXXX 208
LG G ++ S P++ +WH + +TR + + L+VD +Q+++
Sbjct: 953 LGNGPNVIKGNSDRPLNDNQWHNVVITRDNSNTHSLKVDTKMVTQVINGAKNLDLKGDLY 1012
Query: 209 XXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVN--CAHP---C 263
Y+ + V + F GC+ V +N +++ +A+ + C P C
Sbjct: 1013 IAGLAQGMYSNLPKLVASRDGFQGCLASVDLNGRLPDLINDALHRSGQIERGCEGPSTTC 1072
Query: 264 ITQPCGS-GSCVPLYDGYKCVCTQSCKESHLTEVMCASFDHGASFLHYLDPEIIHSSGLL 322
C + G C ++G+ C C+ + C D GA+++ S GL+
Sbjct: 1073 QEDSCANQGICNQQWEGFTCDCSMTSYSGS----QCN--DPGATYIFG------KSGGLI 1120
Query: 323 HYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSK-DFLALGIHNGYAHVMYXX 381
Y + + D T + + + T+ G+++ S+ DFL L I G V++
Sbjct: 1121 LYTWPAN-DRPSTRTD-RLAVGFSTTVKDGILVRIDSAPGLGDFLQLHIEQGKIGVVFNI 1178
Query: 382 XXXXXXXXXXQTKINNGVWHRLTVHRN 408
T +N+G +H + RN
Sbjct: 1179 GTVDISIKEESTPVNDGKYHVVRFTRN 1205
Score = 200 (75.5 bits), Expect = 4.8e-12, P = 4.8e-12
Identities = 105/425 (24%), Positives = 160/425 (37%)
Query: 109 DLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSNPISLG 168
+L+ FK G+LLY GV DF+ L L D + F + T+ + ++
Sbjct: 50 ELSFQFKTNVSAGLLLYFDD--GGVCDFLCLSLVDGRIQLQFSVDCAETTVITDKQVNDS 107
Query: 169 EWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDY----NIVSPKV 224
WH L ++R L +D + P GGVP Y + V
Sbjct: 108 NWHFLMVSRNHLRTVLVLDGEAKPGEVRPQR-QYMNIVSDLFVGGVPSYIRPAALTLDGV 166
Query: 225 KIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNCAHPCITQPCGSGSCVPLYDGY-KCV 283
+ F G I + N E +LG QGV + C PC +G L DG +C
Sbjct: 167 LSEPPFQGFILNLKYGNSEPQLLGS--QGVRL-EMEGLCTENPCENGGTCFLLDGEPRCD 223
Query: 284 CTQS------CKE--SH---LTEVMCASFDHGASFLHYLDPEIIHSSGLLHYKFQLHVDF 332
C+ + C E +H L+ +M + + G S + S L Y +
Sbjct: 224 CSATGYTGKLCSEDVNHIPGLSHLMMS--EQGRSKARDENMATFRGSEYLCYDLSQNP-- 279
Query: 333 RITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQ 392
I I + KT +GLIL TG +S D++ L + +G ++
Sbjct: 280 -IQSSSDEITLSFKTWQRNGLILHTG--KSADYVNLALKDGAVSLVINLGSGAFEAIVEP 336
Query: 393 T--KINNGVWHRLTVHRNFMVVMH-GSSHTRSNKSSKIEFKCLSIQRLHRTGKQCLIRID 449
K N+ WH + V RN H G H NK LH CL+ I
Sbjct: 337 VNGKFNDNAWHDVKVTRNLR--QHSGIGHAMVNK-------------LH-----CLVTIS 376
Query: 450 TD--YSMQSISGGKFEQLNTDSGLYVGGVEDIEELTRSKYHHSFKGWISNLILSNDYQVK 507
D + + + L +D YVGG +L S ++F G + ++ N+ ++
Sbjct: 377 VDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGCLKEVVYKNN-DIR 435
Query: 508 LPLSR 512
L LSR
Sbjct: 436 LELSR 440
Score = 141 (54.7 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 44/162 (27%), Positives = 77/162 (47%)
Query: 36 KGRSKECLEDKC-NKTPCEHGGKCITTPGSSYCLCPL-GFTGDLCQTRLDLQVPQFNGSS 93
+G S C ED C N+ C + T C C + ++G C + +G
Sbjct: 1066 EGPSTTCQEDSCANQGICNQQWEGFT------CDCSMTSYSGSQCNDPGATYIFGKSGGL 1119
Query: 94 YLRYQGLGEQYLSLLD-LTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDL 152
L ++ + D L + F +GIL+ A G+GDF+ L++ + F++
Sbjct: 1120 ILYTWPANDRPSTRTDRLAVGFSTTVKDGILV-RIDSAPGLGDFLQLHIEQGKIGVVFNI 1178
Query: 153 GTGAATLRS-SNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQ 193
GT +++ S P++ G++H +R TR G +A LQVD +P ++
Sbjct: 1179 GTVDISIKEESTPVNDGKYHVVRFTRNGGNATLQVDSWPVNE 1220
Score = 133 (51.9 bits), Expect = 2.6e-09, Sum P(3) = 2.6e-09
Identities = 71/329 (21%), Positives = 131/329 (39%)
Query: 114 FKAIEPNGILLY-NG---HRADGVG------DFIALYLNDRYVDFTFDLGTGAATLRSSN 163
F+ EPNG++L+ +G R D DF A+ L D + D+G+G ++++
Sbjct: 494 FRTTEPNGLILFTHGKPQERKDARSQKNTKVDFFAVELLDGNLYLLLDMGSGTIKVKATQ 553
Query: 164 P-ISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYN--IV 220
+ GEW+ + + R GR + V+ + + G GG+P+ ++
Sbjct: 554 KKANDGEWYHVDIQRDGRSGTISVNS-RRTPFTASGESEILDLEGDMYLGGLPENRAGLI 612
Query: 221 SPK----VKIKSSFIGCIQKVLINNHELNI--LGEAIQGVNVVN-CAH----PCITQPCG 269
P + ++GCI+ + I+ NI L EA V + C+ C + PC
Sbjct: 613 LPTELWTAMLNYGYVGCIRDLFIDGRSKNIRQLAEAQNAAGVKSSCSRLSTKQCDSYPCK 672
Query: 270 SGS-CVPLYDGYKCVCTQSCKESHLTE--VMCASFDHGASFLHYLDPEIIHSSGLLHYKF 326
+ + C ++ + C CT + E S+D G+ ++ + P ++H+
Sbjct: 673 NNAVCKDGWNRFICDCTGTGYWGRTCEREASILSYD-GSMYMKIIMPMVMHTEA------ 725
Query: 327 QLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXX 386
E ++ R + + GL++ T S S D L L + G +M
Sbjct: 726 -----------E-DVSFRFMSQRAYGLLMATTSRDSADTLRLELDGGRVKLMVNLDCIRI 773
Query: 387 XXXXXQ--------TKINNGVWHRLTVHR 407
+ K+N+ WH + V R
Sbjct: 774 NCNASKGPETLYAGQKLNDNEWHTVRVVR 802
Score = 92 (37.4 bits), Expect = 6.7e-17, Sum P(2) = 6.7e-17
Identities = 20/54 (37%), Positives = 28/54 (51%)
Query: 43 LEDKCNKTPCEHGGKCITTPGSSYCLCPL-GFTGDLCQTRLDLQVPQFNGSSYL 95
+E C + PCE+GG C G C C G+TG LC ++ +P G S+L
Sbjct: 198 MEGLCTENPCENGGTCFLLDGEPRCDCSATGYTGKLCSEDVN-HIP---GLSHL 247
Score = 48 (22.0 bits), Expect = 2.6e-09, Sum P(3) = 2.6e-09
Identities = 16/59 (27%), Positives = 31/59 (52%)
Query: 446 IRIDTDYSMQSISGGKFEQLNTD---SGLYVGGVEDIEELTRSKYHHSFKGWISNLILS 501
+++DT Q I+G K L D +GL G ++ +L S+ F+G ++++ L+
Sbjct: 988 LKVDTKMVTQVINGAKNLDLKGDLYIAGLAQGMYSNLPKLVASR--DGFQGCLASVDLN 1044
Score = 38 (18.4 bits), Expect = 2.7e-11, Sum P(2) = 2.7e-11
Identities = 7/21 (33%), Positives = 13/21 (61%)
Query: 11 DDWNTVRVFRHRWDAWIQLND 31
++W+TVRV R + ++D
Sbjct: 793 NEWHTVRVVRRGKSLKLMVDD 813
>ZFIN|ZDB-GENE-070705-209 [details] [associations]
symbol:cntnap5b "contactin associated protein-like
5b" species:7955 "Danio rerio" [GO:0007155 "cell adhesion"
evidence=IEA] InterPro:IPR000421 InterPro:IPR000742 Pfam:PF00754
PROSITE:PS01285 PROSITE:PS01286 PROSITE:PS50022 PROSITE:PS50026
SMART:SM00181 SMART:SM00231 INTERPRO:IPR002181
ZFIN:ZDB-GENE-070705-209 GO:GO:0007165 GO:GO:0007155
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 InterPro:IPR008979 SUPFAM:SSF49785
InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025 SUPFAM:SSF56496
PROSITE:PS51406 Pfam:PF02210 GeneTree:ENSGT00560000076804
EMBL:CABZ01039251 EMBL:CABZ01039252 EMBL:CABZ01039253
EMBL:CABZ01039254 EMBL:CABZ01039255 EMBL:CABZ01039256
EMBL:CABZ01039257 EMBL:CABZ01044499 EMBL:CABZ01044500
EMBL:CABZ01044501 EMBL:CABZ01044502 EMBL:CABZ01044503
EMBL:CABZ01044504 EMBL:CABZ01044505 EMBL:CABZ01044506
EMBL:CABZ01093512 EMBL:CABZ01093513 EMBL:CU062647 IPI:IPI00801051
Ensembl:ENSDART00000110136 Uniprot:F1Q802
Length = 1306
Score = 242 (90.2 bits), Expect = 9.0e-17, P = 9.0e-17
Identities = 89/332 (26%), Positives = 149/332 (44%)
Query: 89 FNGSSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLND-RYVD 147
+ SSYL + L + LS+ D+++ FK P+G+ L N G DFI L L+ V
Sbjct: 799 YQESSYLHFPTLQAE-LSV-DISLYFKTTAPSGVFLENL----GTKDFIRLELSGPSVVT 852
Query: 148 FTFDLGTGAA--TLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGP-FTQXX 204
FTFD+G G T++S P++ +WH +R R R A LQVD+ P + +P T
Sbjct: 853 FTFDVGNGPVVLTVKSHVPLNDKQWHYVRSERNVREASLQVDQLPLRFLEAPSEGHTHLQ 912
Query: 205 XXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVN-CAHPC 263
GG + F+GCI+ + IN L++ A V + C C
Sbjct: 913 LNSQLFIGGTASR---------QRGFLGCIRSLNINGMTLDLEERAKMTPGVSSGCPGHC 963
Query: 264 ITQP--CGS-GSCVPLYDGYKCVCTQSCKES-HLTEVMCASFDHGASFLH-YLDPEIIHS 318
+Q C + G C+ GY C CT S + + + SF+ G+S + + +P +
Sbjct: 964 SSQNSLCHNRGKCIEKSSGYVCDCTHSAYGGPNCKKEVSVSFESGSSVTYTFQEPFSVMR 1023
Query: 319 SGLLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGI-HNGYAHV 377
+ H + + + + +I T+ + ++L T ++ + ++A+ + HNG +
Sbjct: 1024 N---HSRQSSAIFAQSSNSRESIAFSFLTTQTPAMLL-TVNTYHQQYMAIILAHNGSLQI 1079
Query: 378 MYXXXXXXXXXXXXQTKIN--NGVWHRLTVHR 407
Y T +N NG HR+ +HR
Sbjct: 1080 WYRLNREKDPDIFMPTSLNLANGELHRVQIHR 1111
>MGI|MGI:3643623 [details] [associations]
symbol:Cntnap5a "contactin associated protein-like 5A"
species:10090 "Mus musculus" [GO:0004190 "aspartic-type
endopeptidase activity" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR000421 InterPro:IPR000742
InterPro:IPR001969 Pfam:PF00754 PROSITE:PS01285 PROSITE:PS01286
PROSITE:PS50022 PROSITE:PS50026 SMART:SM00181 SMART:SM00231
MGI:MGI:3643623 INTERPRO:IPR002181 GO:GO:0016021 GO:GO:0007165
GO:GO:0006508 GO:GO:0007155 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 InterPro:IPR008979 SUPFAM:SSF49785
InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025 SUPFAM:SSF56496
PROSITE:PS00514 PROSITE:PS51406 GO:GO:0004190 Pfam:PF02210
HOVERGEN:HBG057718 eggNOG:NOG291100 HOGENOM:HOG000230964
GeneTree:ENSGT00560000076804 EMBL:AC098737 EMBL:AC110160
EMBL:AC122189 EMBL:AC122812 EMBL:AC124547 EMBL:AC124690
EMBL:AC132403 EMBL:BN000865 IPI:IPI00750221 RefSeq:NP_001070893.1
UniGene:Mm.337385 ProteinModelPortal:Q0V8T9 SMR:Q0V8T9
PhosphoSite:Q0V8T9 PaxDb:Q0V8T9 PRIDE:Q0V8T9 DNASU:636808
Ensembl:ENSMUST00000094621 GeneID:636808 KEGG:mmu:636808
UCSC:uc007cia.1 CTD:636808 NextBio:423786 Bgee:Q0V8T9
CleanEx:MM_CNTNAP5A Genevestigator:Q0V8T9 Uniprot:Q0V8T9
Length = 1304
Score = 207 (77.9 bits), Expect = 9.0e-17, Sum P(2) = 9.0e-17
Identities = 84/330 (25%), Positives = 143/330 (43%)
Query: 92 SSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLND-RYVDFTF 150
+SYL + ++ + D++ FK +G+ L N G+ DF L ++ V F
Sbjct: 799 ASYLHFPTFHTEFSA--DISFFFKTTALSGVFLENL----GIKDFFRLEMSSPSEVTFAI 852
Query: 151 DLGTGAATL--RSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSS-QILSPGPFTQXXXXX 207
D+G G L +S P++ +WH +R + LQVD P S + S G +
Sbjct: 853 DVGNGPIELLVQSPYPLNDNQWHYIRAETNLKETSLQVDNLPQSMREASEGGHFRLQLNS 912
Query: 208 XXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEA--IQGVNVVNCAHPCIT 265
GG S + K F+GCI+ +L+N H++++ A GV C C +
Sbjct: 913 QLFVGGT------SSRQK---GFLGCIRSLLLNGHKVDLEERAKVTSGVRP-GCPGHCSS 962
Query: 266 --QPC-GSGSCVPLYDGYKCVCTQSCKESHLT-EVMCASFDHGASFLH-YLDPEIIHSSG 320
C G CV + GY C CT S E + + A FD G S + + +P + +
Sbjct: 963 YGSNCHNGGKCVEKHTGYSCDCTNSPYEGPFCRKEISALFDSGTSVTYMFQEPYPVTKNT 1022
Query: 321 LLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGI-HNGYAHVMY 379
L ++ D + ++ I + T+ + L+L+ S S++FLA+ + NG V Y
Sbjct: 1023 SLSSS-AIYTD--LAPFKETIMLSFMTTQAPTLLLYLNFS-SQNFLAILLSRNGSLQVRY 1078
Query: 380 XXXXXXXXXXXXQTK-INNGVWHRLTVHRN 408
T+ + N H++ + R+
Sbjct: 1079 RLSKDESHVFNMDTENLANRRVHQVKISRD 1108
Score = 133 (51.9 bits), Expect = 8.8e-08, Sum P(3) = 8.8e-08
Identities = 55/208 (26%), Positives = 90/208 (43%)
Query: 78 CQTRLDLQVPQFNGSSYLRYQGLGEQYLSLLD-LTIVFKAIEPNGILLYN-GHRADGVGD 135
C R D V F+G S L Y+ + +L D +++ FK+++ +G+L + G R GD
Sbjct: 174 CSYRSD--VADFDGRSSLLYRFNQKTMSTLKDVISLKFKSMQGDGVLFHGEGQR----GD 227
Query: 136 FIALYLNDRYVDFTFDLGTGAATLRSSNP-ISLGE------WHKLRLTRTGRHAYLQVDR 188
I L L + +L A L S+ P + LG WH + L R G+ A VD
Sbjct: 228 HITLELQKGRLALYLNLDDSKARLSSTVPLVILGSLLDDQHWHSVLLERVGKQANFTVD- 286
Query: 189 FPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILG 248
+ + G GG+P + P +K +F GCI+ + N +NI+
Sbjct: 287 MNTQHFRTKGDTDSLDIDYELSFGGIPVPS--KPGTFLKKNFHGCIENLYYNG--VNIID 342
Query: 249 EAIQGVNVVNCAHPCITQPCGSGSCVPL 276
A + + + + +T C VP+
Sbjct: 343 LAKRRKHQIYSGN--VTFSCSEPQIVPI 368
Score = 86 (35.3 bits), Expect = 9.0e-17, Sum P(2) = 9.0e-17
Identities = 16/37 (43%), Positives = 21/37 (56%)
Query: 43 LEDKCNKTPCEHGGKCITTPGSSYCLCP-LGFTGDLC 78
++D+C CEHGG C T + YC C G+TG C
Sbjct: 546 IKDRCLPNYCEHGGHCDQTWTTFYCNCSGTGYTGATC 582
Score = 65 (27.9 bits), Expect = 8.8e-08, Sum P(3) = 8.8e-08
Identities = 13/67 (19%), Positives = 31/67 (46%)
Query: 340 NIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGV 399
++ + +T + GL+L T S+ L L + G ++ + +N+G+
Sbjct: 390 SVSFQFRTWNEDGLLLSTELSEGSGTLLLILEGGTLRLLIKKVARHGTEILTGSGLNDGL 449
Query: 400 WHRLTVH 406
WH ++++
Sbjct: 450 WHSVSIN 456
Score = 56 (24.8 bits), Expect = 8.8e-08, Sum P(3) = 8.8e-08
Identities = 24/69 (34%), Positives = 37/69 (53%)
Query: 442 KQCLIRIDT-DYSMQSIS-GGKFEQLNTDSGLYVGGVEDIEELTRSKYHHSFKGWISNLI 499
K+ +++D SM+ S GG F +L +S L+VGG +R K F G I +L+
Sbjct: 884 KETSLQVDNLPQSMREASEGGHF-RLQLNSQLFVGGTS-----SRQK---GFLGCIRSLL 934
Query: 500 LSNDYQVKL 508
L N ++V L
Sbjct: 935 L-NGHKVDL 942
>RGD|1559812 [details] [associations]
symbol:Cntnap5a "contactin associated protein-like 5A"
species:10116 "Rattus norvegicus" [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR000421 InterPro:IPR000742 Pfam:PF00754 PROSITE:PS01285
PROSITE:PS01286 PROSITE:PS50022 PROSITE:PS50026 SMART:SM00181
SMART:SM00231 RGD:1559812 INTERPRO:IPR002181 GO:GO:0016021
GO:GO:0007165 GO:GO:0007155 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 InterPro:IPR008979 SUPFAM:SSF49785
InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025 SUPFAM:SSF56496
PROSITE:PS00514 PROSITE:PS51406 Pfam:PF02210 HOVERGEN:HBG057718
eggNOG:NOG291100 HOGENOM:HOG000230964 OrthoDB:EOG441Q9K CTD:636808
EMBL:AABR03084638 EMBL:AABR03084763 EMBL:AABR03084792
EMBL:AABR03084826 EMBL:AABR03084916 EMBL:AABR03085048
EMBL:AABR03085225 EMBL:AABR03085340 EMBL:AABR03085455
EMBL:AABR03085761 EMBL:AABR03086666 EMBL:BN000868 IPI:IPI00366737
RefSeq:NP_001041330.1 UniGene:Rn.232340 ProteinModelPortal:Q0V8T6
PRIDE:Q0V8T6 GeneID:297832 KEGG:rno:297832 UCSC:RGD:1559812
NextBio:642735 ArrayExpress:Q0V8T6 Genevestigator:Q0V8T6
Uniprot:Q0V8T6
Length = 1305
Score = 205 (77.2 bits), Expect = 9.3e-17, Sum P(2) = 9.3e-17
Identities = 86/354 (24%), Positives = 153/354 (43%)
Query: 92 SSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLND-RYVDFTF 150
+SYL + ++ + D++ FK +G+ L N G+ DF+ L ++ V FT
Sbjct: 799 ASYLHFPTFHAEFSA--DISFFFKTTALSGVFLENL----GIKDFLRLEMSSPSEVTFTI 852
Query: 151 DLGTGAATL--RSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSS-QILSPGPFTQXXXXX 207
D+G G L +S P++ +WH +R R + LQVD P S + S + +
Sbjct: 853 DVGNGPVELLVQSPYPLNDNQWHYIRAERNVKETSLQVDNLPLSLREASEEAYFRLHLTS 912
Query: 208 XXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEA--IQGVNVVNCAHPC-- 263
GG S + K F+GC++ + +N +++ A + GV C C
Sbjct: 913 QLFVGGT------SSRQK---GFLGCMRSLHLNGQNTDLIERAKLMSGVTP-GCPGHCSS 962
Query: 264 ITQPC-GSGSCVPLYDGYKCVCTQSCKESHLTEV-MCASFDHGASFLH-YLDPE-IIHSS 319
+ C G CV GY C CT S E + + A FD G S + + +P +I ++
Sbjct: 963 YSSNCHNGGKCVEKQSGYSCDCTNSPNEGPFCQKEISALFDPGTSVTYMFQEPYLVIKNT 1022
Query: 320 GLLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIH-NGYAHVM 378
LL ++ D + + I + T+ + ++L+ S K FLA+ + NG +
Sbjct: 1023 SLL--SSPIYTDTARS--KETIMLNFLTAQAPTILLYLNFSSQK-FLAILLSSNGSLQIR 1077
Query: 379 YXXXXXXXXXXXXQTK-INNGVWHRLTVHRNF--MVVMHGSSHTRSNKSSKIEF 429
+ T+ + NG H++ + ++ + + N S+K+EF
Sbjct: 1078 FRLSKGESHVYTMSTENLANGRVHQVKISKDGPEISIQMDQQLFSYNFSTKVEF 1131
Score = 127 (49.8 bits), Expect = 4.9e-06, Sum P(4) = 4.9e-06
Identities = 52/208 (25%), Positives = 90/208 (43%)
Query: 78 CQTRLDLQVPQFNGSSYLRYQGLGEQYLSLLD-LTIVFKAIEPNGILLYN-GHRADGVGD 135
C R D V F+G S L Y+ + +L D +++ FK+++ +G+L + G R GD
Sbjct: 174 CSYRSD--VADFDGRSTLLYRFNQKTMSTLKDVISLKFKSMQGDGVLFHGEGQR----GD 227
Query: 136 FIALYLNDRYVDFTFDLGTGAATLRSSNP-ISLGE------WHKLRLTRTGRHAYLQVDR 188
+ L L + +L A L S+ P + +G WH + L R G+ A VD
Sbjct: 228 HVTLELQKGRLALYLNLDDSKARLSSTVPLVIMGSLLDDQHWHSVLLERVGKQANFTVD- 286
Query: 189 FPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILG 248
+ + G GG+P + P +K +F GC++ + N +NI+
Sbjct: 287 MNTQHFQTKGETDALDIDYELSFGGIPVPS--KPGTFVKKNFHGCMENLYYNG--VNIID 342
Query: 249 EAIQGVNVVNCAHPCITQPCGSGSCVPL 276
A + + + + +T C VP+
Sbjct: 343 LAKRRKHQIYSGN--VTFSCSEPQIVPI 368
Score = 88 (36.0 bits), Expect = 9.3e-17, Sum P(2) = 9.3e-17
Identities = 16/37 (43%), Positives = 21/37 (56%)
Query: 43 LEDKCNKTPCEHGGKCITTPGSSYCLCP-LGFTGDLC 78
++D+C CEHGG C T + YC C G+TG C
Sbjct: 546 IKDRCLPNYCEHGGHCAQTWTTFYCNCSDTGYTGATC 582
Score = 65 (27.9 bits), Expect = 4.9e-06, Sum P(4) = 4.9e-06
Identities = 13/67 (19%), Positives = 31/67 (46%)
Query: 340 NIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGV 399
++ + +T + GL+L T S+ L L + G ++ + +N+G+
Sbjct: 390 SVSFQFRTWNEDGLLLSTELSEGSGTLLLILEGGTLRLLIKKVAGHGTEIKTGSGLNDGL 449
Query: 400 WHRLTVH 406
WH ++++
Sbjct: 450 WHSVSIN 456
Score = 45 (20.9 bits), Expect = 4.9e-06, Sum P(4) = 4.9e-06
Identities = 12/41 (29%), Positives = 22/41 (53%)
Query: 436 RLHRTGKQCLIRIDT-DYSMQSISGGKFEQLNTDSGLYVGG 475
R R K+ +++D S++ S + +L+ S L+VGG
Sbjct: 878 RAERNVKETSLQVDNLPLSLREASEEAYFRLHLTSQLFVGG 918
Score = 40 (19.1 bits), Expect = 4.9e-06, Sum P(4) = 4.9e-06
Identities = 11/42 (26%), Positives = 23/42 (54%)
Query: 490 SFKGWISNLILSN-DYQVKLPLSRSQGSSCQLTCETLNTGQV 530
S + +++ L+ SN Q++ LS+ + ++ E L G+V
Sbjct: 1059 SSQKFLAILLSSNGSLQIRFRLSKGESHVYTMSTENLANGRV 1100
Score = 39 (18.8 bits), Expect = 1.9e-05, Sum P(4) = 1.9e-05
Identities = 14/37 (37%), Positives = 16/37 (43%)
Query: 452 YSMQSISGGKFEQLNTDSGLYVGGVEDIEELTRSKYH 488
YSM GG EQL + G E E+ KYH
Sbjct: 651 YSMTLNYGGSMEQLEA----LIDGSEYCEQ--ELKYH 681
>UNIPROTKB|F1LRD8 [details] [associations]
symbol:Cntnap5a "Contactin-associated protein-like 5-1"
species:10116 "Rattus norvegicus" [GO:0007155 "cell adhesion"
evidence=IEA] InterPro:IPR000421 InterPro:IPR000742 Pfam:PF00754
PROSITE:PS01285 PROSITE:PS50022 PROSITE:PS50026 SMART:SM00181
SMART:SM00231 RGD:1559812 INTERPRO:IPR002181 GO:GO:0007165
GO:GO:0007155 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 InterPro:IPR008979
SUPFAM:SSF49785 InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025
SUPFAM:SSF56496 PROSITE:PS51406 Pfam:PF02210 IPI:IPI00366737
Ensembl:ENSRNOT00000050329 ArrayExpress:F1LRD8 Uniprot:F1LRD8
Length = 1305
Score = 204 (76.9 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 86/354 (24%), Positives = 153/354 (43%)
Query: 92 SSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLND-RYVDFTF 150
+SYL + ++ + D++ FK +G+ L N G+ DF+ L ++ V FT
Sbjct: 799 ASYLHFPTFHAEFSA--DISFFFKTTALSGVFLENL----GIKDFLRLEMSSPSEVTFTI 852
Query: 151 DLGTGAATL--RSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSS-QILSPGPFTQXXXXX 207
D+G G L +S P++ +WH +R R + LQVD P S + S + +
Sbjct: 853 DVGNGPVELLVQSPYPLNDNQWHYIRAERNVKETSLQVDNLPLSLREASEEAYFRLHLTS 912
Query: 208 XXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEA--IQGVNVVNCAHPC-- 263
GG S + K F+GC++ + +N +++ A + GV C C
Sbjct: 913 QLFVGGT------SSRQK---GFLGCMRSLHLNGQNTDLIERAKLMSGVTP-GCPGHCSS 962
Query: 264 ITQPC-GSGSCVPLYDGYKCVCTQSCKESHLTEV-MCASFDHGASFLH-YLDPE-IIHSS 319
+ C G CV GY C CT S E + + A FD G S + + +P +I ++
Sbjct: 963 YSSNCHNGGKCVEKQSGYSCDCTNSPNEGPFCQKEISALFDPGTSVTYMFQEPYLVIKNT 1022
Query: 320 GLLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIH-NGYAHVM 378
LL ++ D + + I + T+ + ++L+ S K FLA+ + NG +
Sbjct: 1023 SLL--SSPIYTDTARS--KETIMLNFLTAQAPTILLYLNFSSQK-FLAILLSSNGDLQIR 1077
Query: 379 YXXXXXXXXXXXXQTK-INNGVWHRLTVHRNF--MVVMHGSSHTRSNKSSKIEF 429
+ T+ + NG H++ + ++ + + N S+K+EF
Sbjct: 1078 FRLSKGESHVYTMSTENLANGRVHQVKISKDGPEISIQMDQQLFSYNFSTKVEF 1131
Score = 127 (49.8 bits), Expect = 1.3e-06, Sum P(4) = 1.3e-06
Identities = 52/208 (25%), Positives = 90/208 (43%)
Query: 78 CQTRLDLQVPQFNGSSYLRYQGLGEQYLSLLD-LTIVFKAIEPNGILLYN-GHRADGVGD 135
C R D V F+G S L Y+ + +L D +++ FK+++ +G+L + G R GD
Sbjct: 174 CSYRSD--VADFDGRSTLLYRFNQKTMSTLKDVISLKFKSMQGDGVLFHGEGQR----GD 227
Query: 136 FIALYLNDRYVDFTFDLGTGAATLRSSNP-ISLGE------WHKLRLTRTGRHAYLQVDR 188
+ L L + +L A L S+ P + +G WH + L R G+ A VD
Sbjct: 228 HVTLELQKGRLALYLNLDDSKARLSSTVPLVIMGSLLDDQHWHSVLLERVGKQANFTVD- 286
Query: 189 FPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILG 248
+ + G GG+P + P +K +F GC++ + N +NI+
Sbjct: 287 MNTQHFQTKGETDALDIDYELSFGGIPVPS--KPGTFVKKNFHGCMENLYYNG--VNIID 342
Query: 249 EAIQGVNVVNCAHPCITQPCGSGSCVPL 276
A + + + + +T C VP+
Sbjct: 343 LAKRRKHQIYSGN--VTFSCSEPQIVPI 368
Score = 88 (36.0 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 16/37 (43%), Positives = 21/37 (56%)
Query: 43 LEDKCNKTPCEHGGKCITTPGSSYCLCP-LGFTGDLC 78
++D+C CEHGG C T + YC C G+TG C
Sbjct: 546 IKDRCLPNYCEHGGHCAQTWTTFYCNCSDTGYTGATC 582
Score = 65 (27.9 bits), Expect = 1.3e-06, Sum P(4) = 1.3e-06
Identities = 13/67 (19%), Positives = 31/67 (46%)
Query: 340 NIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGV 399
++ + +T + GL+L T S+ L L + G ++ + +N+G+
Sbjct: 390 SVSFQFRTWNEDGLLLSTELSEGSGTLLLILEGGTLRLLIKKVAGHGTEIKTGSGLNDGL 449
Query: 400 WHRLTVH 406
WH ++++
Sbjct: 450 WHSVSIN 456
Score = 46 (21.3 bits), Expect = 1.3e-06, Sum P(4) = 1.3e-06
Identities = 12/42 (28%), Positives = 24/42 (57%)
Query: 490 SFKGWISNLILSN-DYQVKLPLSRSQGSSCQLTCETLNTGQV 530
S + +++ L+ SN D Q++ LS+ + ++ E L G+V
Sbjct: 1059 SSQKFLAILLSSNGDLQIRFRLSKGESHVYTMSTENLANGRV 1100
Score = 45 (20.9 bits), Expect = 1.3e-06, Sum P(4) = 1.3e-06
Identities = 12/41 (29%), Positives = 22/41 (53%)
Query: 436 RLHRTGKQCLIRIDT-DYSMQSISGGKFEQLNTDSGLYVGG 475
R R K+ +++D S++ S + +L+ S L+VGG
Sbjct: 878 RAERNVKETSLQVDNLPLSLREASEEAYFRLHLTSQLFVGG 918
Score = 39 (18.8 bits), Expect = 4.9e-06, Sum P(4) = 4.9e-06
Identities = 14/37 (37%), Positives = 16/37 (43%)
Query: 452 YSMQSISGGKFEQLNTDSGLYVGGVEDIEELTRSKYH 488
YSM GG EQL + G E E+ KYH
Sbjct: 651 YSMTLNYGGSMEQLEA----LIDGSEYCEQ--ELKYH 681
>UNIPROTKB|F1S5G9 [details] [associations]
symbol:LOC100738148 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0042462 "eye photoreceptor cell development"
evidence=IEA] [GO:0007009 "plasma membrane organization"
evidence=IEA] [GO:0005902 "microvillus" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005509 "calcium ion binding"
evidence=IEA] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 Pfam:PF07645 PROSITE:PS01187
PROSITE:PS50026 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 Pfam:PF02210
GeneTree:ENSGT00690000101660 EMBL:CU571348 EMBL:CU914732
ProteinModelPortal:F1S5G9 Ensembl:ENSSSCT00000011925 OMA:NCELEVE
Uniprot:F1S5G9
Length = 705
Score = 210 (79.0 bits), Expect = 2.7e-16, Sum P(2) = 2.7e-16
Identities = 80/260 (30%), Positives = 114/260 (43%)
Query: 47 CNKTPCEHGGKCIT-----TPGSSYCLCPLGFTGDLCQTRLDLQVPQFNGSSYLRY-QGL 100
C PC G CI G S CLCP G+TG LC+T L F G+ ++ G
Sbjct: 443 CTDHPCLSSGLCIPHLRNGQHGFS-CLCPPGYTGSLCETVTTLS---FEGNGFVWVPSGS 498
Query: 101 GEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLG-TGAATL 159
S D+ + F+ ++P +LL+ G DG F+AL L YV + +G L
Sbjct: 499 VAAKDSGCDVALRFQTVQPTALLLFRG---DG-DTFLALELLSGYVHVSVQVGHQPKVVL 554
Query: 160 RSSNPISLGEWHKLRLT-RTGRHAYLQVDRFPSSQIL-SPGPFTQXXXXXX---XXXGGV 214
+ S GEWH + +T L+ D S I +P PF GG+
Sbjct: 555 FIAQNASDGEWHSVEVTFAEAVTVALRDDSCTGSCISKAPSPFGSDRSACALQNSFLGGL 614
Query: 215 PDYNIVS-PKVKIKS--SFIGCIQKVLINNHELNILGEAIQG---VNV-VNCAHP--CIT 265
P+ I S P + S S +GC+Q + I ++ I E+I +NV C C +
Sbjct: 615 PEGTIRSLPVDTLPSTPSLVGCLQDIEIGSNP--ITPESISSGWSLNVKAGCVRKDWCES 672
Query: 266 QPCGS-GSCVPLYDGYKCVC 284
PC G C+ L+ GY+C C
Sbjct: 673 HPCHHRGRCLNLWLGYQCAC 692
Score = 97 (39.2 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 40 KECLEDK--CNKTPCEHGGKCITTPGSS--YCLCPLGFTGDLCQTRLDLQVPQFNGSSYL 95
K+C ++K C +PC C++TPG C CP G++G C T V F G++
Sbjct: 65 KDCDDEKDPCFSSPCPGNATCVSTPGERRFLCTCPPGYSGATCDT-----VVSFCGTNSC 119
Query: 96 RYQGL 100
++ G+
Sbjct: 120 QHGGI 124
Score = 89 (36.4 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 13/33 (39%), Positives = 17/33 (51%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQ 79
C C+HGG C P C+CP G+ G C+
Sbjct: 114 CGTNSCQHGGICGQDPVHPVCICPAGYAGRFCE 146
Score = 85 (35.0 bits), Expect = 2.9e-05, Sum P(3) = 2.9e-05
Identities = 17/60 (28%), Positives = 30/60 (50%)
Query: 36 KGRSKECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLD--LQVPQFNGSS 93
+GR + D+C PC++ C+ G CLCP ++G C+ ++ P NG++
Sbjct: 179 QGRHCDLEVDECVSDPCKNEATCLNEIGRYTCLCPHNYSGVNCELEVEECWSQPCLNGAT 238
Score = 80 (33.2 bits), Expect = 9.8e-05, Sum P(3) = 9.8e-05
Identities = 15/39 (38%), Positives = 19/39 (48%)
Query: 45 DKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLD 83
++C PC +G C GS C C GF GD C+ D
Sbjct: 226 EECWSQPCLNGATCRDAAGSYACDCAPGFLGDRCELDTD 264
Score = 78 (32.5 bits), Expect = 0.00016, Sum P(3) = 0.00016
Identities = 15/47 (31%), Positives = 20/47 (42%)
Query: 37 GRSKECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLD 83
GR E D+C +PC +G C C C G+ G C +D
Sbjct: 142 GRFCELDHDECGSSPCRNGAMCQDGINGYSCFCVPGYQGRHCDLEVD 188
Score = 71 (30.1 bits), Expect = 2.7e-16, Sum P(2) = 2.7e-16
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 37 GRSK-ECLED--KCNKTPCEHGGKCITTPGSSYCLC 69
GR+ C ED +C+ +PC++GG C G+ C C
Sbjct: 386 GRTGIHCEEDLDECSSSPCKNGGTCENLTGNYTCRC 421
Score = 70 (29.7 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 17/66 (25%), Positives = 30/66 (45%)
Query: 340 NIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGV 399
++ +R +T + L+L+ G + FLAL + +GY HV ++G
Sbjct: 507 DVALRFQTVQPTALLLFRGDGDT--FLALELLSGYVHVSVQVGHQPKVVLFIAQNASDGE 564
Query: 400 WHRLTV 405
WH + V
Sbjct: 565 WHSVEV 570
Score = 68 (29.0 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 19/66 (28%), Positives = 28/66 (42%)
Query: 240 NNHELNILGEAIQGVNVVNCAHPCITQPC-GSGSCVPLYDGYKCVC----TQSCKESHLT 294
N++ N G G PC ++PC + +C D Y C C T + ESH+
Sbjct: 282 NSYSCNCTGSGFTGTRCETLMLPCWSKPCHNNATCEDGTDNYTCHCWPGYTGAQCESHVD 341
Query: 295 EVMCAS 300
C+S
Sbjct: 342 T--CSS 345
Score = 54 (24.1 bits), Expect = 3.8e-05, Sum P(3) = 3.8e-05
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 263 CITQPCGSGS-CVPLYDGYKCVCTQSCKESH 292
C + PC +G+ C +GY C C + H
Sbjct: 152 CGSSPCRNGAMCQDGINGYSCFCVPGYQGRH 182
Score = 50 (22.7 bits), Expect = 9.3e-05, Sum P(3) = 9.3e-05
Identities = 12/32 (37%), Positives = 15/32 (46%)
Query: 257 VNC---AHPCITQPCGSGS-CVPLYDGYKCVC 284
VNC C +QPC +G+ C Y C C
Sbjct: 219 VNCELEVEECWSQPCLNGATCRDAAGSYACDC 250
Score = 49 (22.3 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 10/26 (38%), Positives = 13/26 (50%)
Query: 263 CITQPC-GSGSCVPLYDGYKCVCTQS 287
C + PC G C+ + Y C CT S
Sbjct: 266 CASGPCLHGGLCMDGANSYSCNCTGS 291
Score = 45 (20.9 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 8/23 (34%), Positives = 11/23 (47%)
Query: 37 GRSKECLEDKCNKTPCEHGGKCI 59
G E D C+ PC G+C+
Sbjct: 333 GAQCESHVDTCSSNPCLPDGECV 355
Score = 42 (19.8 bits), Expect = 0.00057, Sum P(3) = 0.00057
Identities = 13/39 (33%), Positives = 17/39 (43%)
Query: 264 ITQPCGSGSCVPLYDGYKCVCTQSCKESHLTEVM--CAS 300
+ QP S S P GY C+C H E + C+S
Sbjct: 364 LVQPL-SPSSRPEASGYICICPPGRTGIHCEEDLDECSS 401
Score = 37 (18.1 bits), Expect = 9.1e-13, Sum P(2) = 9.1e-13
Identities = 6/26 (23%), Positives = 9/26 (34%)
Query: 44 EDKCNKTPCEHGGKCITTPGSSYCLC 69
+ KC C + C + C C
Sbjct: 31 DTKCRSNSCPNNSTCKNFSKDNSCHC 56
>RGD|1566343 [details] [associations]
symbol:Cntnap5c "contactin associated protein-like 5C"
species:10116 "Rattus norvegicus" [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR000421 InterPro:IPR000742 Pfam:PF00754 PROSITE:PS01285
PROSITE:PS01286 PROSITE:PS50022 PROSITE:PS50026 SMART:SM00181
SMART:SM00231 INTERPRO:IPR002181 GO:GO:0016021 GO:GO:0007165
GO:GO:0007155 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 InterPro:IPR008979 SUPFAM:SSF49785
InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025 SUPFAM:SSF56496
PROSITE:PS00514 PROSITE:PS51406 Pfam:PF02210 HOVERGEN:HBG057718
eggNOG:NOG291100 HOGENOM:HOG000230964 OrthoDB:EOG441Q9K CTD:620292
EMBL:AABR03084626 EMBL:AABR03084670 EMBL:AABR03084735
EMBL:AABR03084983 EMBL:AABR03085038 EMBL:AABR03085143
EMBL:AABR03085216 EMBL:AABR03086358 EMBL:AABR03086625 EMBL:BN000871
IPI:IPI00563233 RefSeq:NP_001041331.1 UniGene:Rn.202374
ProteinModelPortal:Q0V8T3 PhosphoSite:Q0V8T3 PRIDE:Q0V8T3
GeneID:297846 KEGG:rno:297846 UCSC:RGD:1566343 NextBio:642741
ArrayExpress:Q0V8T3 Genevestigator:Q0V8T3 Uniprot:Q0V8T3
Length = 1305
Score = 203 (76.5 bits), Expect = 5.1e-16, Sum P(2) = 5.1e-16
Identities = 86/355 (24%), Positives = 156/355 (43%)
Query: 92 SSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLND-RYVDFTF 150
+SYL + ++ + D++ FK +G+ L N G+ DF+ L ++ + FT
Sbjct: 799 ASYLYFPTFHAEFSA--DISFFFKTTALSGVFLENL----GIKDFLRLEMSSPSEITFTI 852
Query: 151 DLGTGAATL--RSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSS-QILSPGPFTQXXXXX 207
D+G G L +S P++ +WH +R R + LQVD P S + S + +
Sbjct: 853 DVGNGPVELLIQSPYPLNDNQWHYIRAERNLKETSLQVDNLPQSMREASEEAYFRLHLTS 912
Query: 208 XXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEA--IQGVNVVNCAHPCIT 265
GG S + K F+GC++ + +N +++ A + GV C C +
Sbjct: 913 QLFVGGT------SSRQK---GFLGCMRSLHLNGQNTDLIERAKLMSGVTP-GCLGHCSS 962
Query: 266 --QPC-GSGSCVPLYDGYKCVCTQSCKESHLTEV-MCASFDHGASFLH-YLDPE-IIHSS 319
C G CV GY C CT S E + + A F+ G S + + +P +I ++
Sbjct: 963 YGSNCLNGGKCVEKQSGYSCDCTNSPNEGPFCQKEISALFNSGTSVTYLFQEPYLVIKNT 1022
Query: 320 GLLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGI-HNGYAHVM 378
LL ++ D + + I + T+ + ++L+ S S++FLA+ + NG +
Sbjct: 1023 SLL--SSPIYADTAPS--KETIMLNFLTTQAPTILLYLNFS-SQNFLAILLSRNGSLQIC 1077
Query: 379 YXXXXXXXXXXXXQTK-INNGVWHRLTVHRN---FMVVMHGSSHTRSNKSSKIEF 429
+ T+ + NG H++ ++++ + M T N S K+EF
Sbjct: 1078 FRLSKIESHVYTMNTENLANGRVHQVKINKDGPELSIQMDQQLFTY-NFSPKVEF 1131
Score = 122 (48.0 bits), Expect = 1.0e-05, Sum P(3) = 1.0e-05
Identities = 53/208 (25%), Positives = 89/208 (42%)
Query: 78 CQTRLDLQVPQFNGSSYLRYQGLGEQYLSLLD-LTIVFKAIEPNGILLYN-GHRADGVGD 135
C + D + F+G S L Y+ + +L D +++ FK+++ +G+L + G R GD
Sbjct: 174 CSYKSD--IVGFDGQSTLLYRFNQKTMSTLKDVISLKFKSMQGDGVLFHGEGQR----GD 227
Query: 136 FIALYLNDRYVDFTFDLGTGAATLRSSNPIS-LGE------WHKLRLTRTGRHAYLQVDR 188
I L L + ++ A L P++ LG WH + L R G+ A VDR
Sbjct: 228 HITLELQKGRLALYLNIDGSKARLSIIAPLAILGSLLDDQHWHSVLLERVGKQANFTVDR 287
Query: 189 FPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILG 248
+ G GG+P + P +K +F GCI+ V N +NI+
Sbjct: 288 -NTQHFQIKGETDALDIDYELSFGGIPVPS--KPGTFLKKNFHGCIENVYYNG--VNIID 342
Query: 249 EAIQGVNVVNCAHPCITQPCGSGSCVPL 276
A + + + + +T C VP+
Sbjct: 343 LAKRRKHQIYSGN--VTFSCSEPEIVPI 368
Score = 83 (34.3 bits), Expect = 5.1e-16, Sum P(2) = 5.1e-16
Identities = 15/37 (40%), Positives = 20/37 (54%)
Query: 43 LEDKCNKTPCEHGGKCITTPGSSYCLCP-LGFTGDLC 78
++D+C CEHGG C + YC C G+TG C
Sbjct: 546 IKDRCLPNYCEHGGHCAQNWTTFYCNCSDTGYTGATC 582
Score = 65 (27.9 bits), Expect = 1.0e-05, Sum P(3) = 1.0e-05
Identities = 13/67 (19%), Positives = 30/67 (44%)
Query: 340 NIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGV 399
++ +T + GL+L T S+ L L + G ++ + +N+G+
Sbjct: 390 SVSFHFRTWNEDGLLLSTELSEGSGTLLLILDGGSLRLLIKKVARHGTEIITGSSLNDGL 449
Query: 400 WHRLTVH 406
WH ++++
Sbjct: 450 WHSVSIN 456
Score = 47 (21.6 bits), Expect = 1.0e-05, Sum P(3) = 1.0e-05
Identities = 13/41 (31%), Positives = 22/41 (53%)
Query: 436 RLHRTGKQCLIRIDT-DYSMQSISGGKFEQLNTDSGLYVGG 475
R R K+ +++D SM+ S + +L+ S L+VGG
Sbjct: 878 RAERNLKETSLQVDNLPQSMREASEEAYFRLHLTSQLFVGG 918
>RGD|620212 [details] [associations]
symbol:Nrxn3 "neurexin 3" species:10116 "Rattus norvegicus"
[GO:0004872 "receptor activity" evidence=IEA] [GO:0005246 "calcium
channel regulator activity" evidence=ISO] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0007268
"synaptic transmission" evidence=IEA;ISO] [GO:0007269
"neurotransmitter secretion" evidence=ISO] [GO:0007416 "synapse
assembly" evidence=IEA;ISO] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR000742 InterPro:IPR027149 PROSITE:PS50026 SMART:SM00181
InterPro:IPR000152 RGD:620212 GO:GO:0016021 GO:GO:0005886
GO:GO:0005576 GO:GO:0046872 GO:GO:0007155 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0007416 PROSITE:PS01186 InterPro:IPR001791
SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025 GO:GO:0007269
GO:GO:0005246 Pfam:PF02210 InterPro:IPR003585 SMART:SM00294
eggNOG:NOG302266 HOGENOM:HOG000230481 HOVERGEN:HBG052670 KO:K07377
OrthoDB:EOG41G339 CTD:9369 PANTHER:PTHR10127:SF405 EMBL:L14851
IPI:IPI00476688 IPI:IPI00829422 IPI:IPI00829428 IPI:IPI00829441
IPI:IPI00829447 IPI:IPI00829448 IPI:IPI00829450 IPI:IPI00829453
IPI:IPI00829456 IPI:IPI00829461 IPI:IPI00829465 IPI:IPI00829472
IPI:IPI00829491 IPI:IPI00829492 IPI:IPI00829495 IPI:IPI00829499
IPI:IPI00829500 IPI:IPI00829503 IPI:IPI00829509 PIR:I48216
RefSeq:NP_446269.2 UniGene:Rn.10926 ProteinModelPortal:Q07310
SMR:Q07310 STRING:Q07310 PhosphoSite:Q07310 PRIDE:Q07310
GeneID:116508 KEGG:rno:116508 UCSC:RGD:620212 NextBio:619125
ArrayExpress:Q07310 Genevestigator:Q07310
GermOnline:ENSRNOG00000024722 Uniprot:Q07310
Length = 1578
Score = 207 (77.9 bits), Expect = 6.0e-16, Sum P(2) = 6.0e-16
Identities = 78/327 (23%), Positives = 142/327 (43%)
Query: 92 SSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFD 151
SSYL L + Y S+ L FK +G +L+N DG +FIA+ L Y+ + FD
Sbjct: 883 SSYLTLATL-QAYTSM-HLFFQFKTTSADGFILFNS--GDG-NNFIAVELVKGYIHYVFD 937
Query: 152 LGTGAATLR--SSNPISLGEWHKLRLTRTGRHAY-LQVDRFPSSQILSPGPFTQXXXXXX 208
LG G ++ S P++ +WH + +TR + + L+VD +Q+++
Sbjct: 938 LGNGPNVIKGNSDRPLNDNQWHNVVITRDNSNTHSLKVDTKVVTQVINGAKNLDLKGDLY 997
Query: 209 XXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVN--CAHP---C 263
Y+ + V + F GC+ V +N +++ +A+ ++ C P C
Sbjct: 998 MAGLAQGMYSNLPKLVASRDGFQGCLASVDLNGRLPDLINDALHRSGQIDRGCEGPSTTC 1057
Query: 264 ITQPCGS-GSCVPLYDGYKCVCTQSCKESHLTEVMCASFDHGASFLHYLDPEIIHSSGLL 322
C + G C+ ++G+ C C+ + + C D GA+++ S GL+
Sbjct: 1058 QEDSCANQGVCMQQWEGFTCDCSMTSYSGN----QCN--DPGATYIFG------KSGGLI 1105
Query: 323 HYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSK-DFLALGIHNGYAHVMYXX 381
Y + + D T + + + T+ G+++ S+ DFL L I G V++
Sbjct: 1106 LYTWPAN-DRPSTRSD-RLAVGFSTTVKDGVLVRIDSAPGLGDFLQLHIEQGKIGVVFNI 1163
Query: 382 XXXXXXXXXXQTKINNGVWHRLTVHRN 408
+T +N+G +H + RN
Sbjct: 1164 GTVDISIKEERTPVNDGKYHVVRFTRN 1190
Score = 172 (65.6 bits), Expect = 8.8e-11, Sum P(2) = 8.8e-11
Identities = 90/360 (25%), Positives = 136/360 (37%)
Query: 84 LQVPQFNGSSY-----LRYQGLGEQYLSLL--------DLTIVFKAIEPNGILLYNGHRA 130
L+V F GS L + GL Q+ L DL+ FK G+LLY
Sbjct: 12 LKVSSFLGSLVGLCLGLEFMGLPNQWARYLRWDASTRSDLSFQFKTNVSTGLLLYLDD-- 69
Query: 131 DGVGDFIALYLNDRYVDFTFDLGTGAATLRSSNPISLGEWHKLRLTRTGRHAYLQVD-RF 189
GV DF+ L L D V F + T+ S+ ++ WH L ++R L +D
Sbjct: 70 GGVCDFLCLSLVDGRVQLRFSMDCAETTVLSNKQVNDSSWHFLMVSRDRVRTGLVIDGEG 129
Query: 190 PSSQILSPGPFTQXXXXXXXXXGGVPDYN---IVSPKVKIKSSFIGCIQKVLINNHELNI 246
S ++ + P+ GG D + V+ F G + + N E +
Sbjct: 130 QSGELRAQRPYMDVVSDLFLG-GGPADIRPSALTLDGVQNMPGFKGLMLDLKYGNSEPRL 188
Query: 247 LGEAIQGVNVVNCAHPCITQPCGSGSCVPLYDGYK-CVCTQS------CKES-----HLT 294
LG Q V + PC +PC +G L DG+ C C+ + C E L+
Sbjct: 189 LGS--QSVQL-EAEGPCGERPCENGGICFLLDGHPTCDCSTTGYGGTLCSEDVSQGPGLS 245
Query: 295 EVMCASFDHGASFLHYLDPEIIHSSGLLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLI 354
+M + + G S + S L Y + I I + KT +GLI
Sbjct: 246 HLMMS--EQGRSKAREENVATFRGSEYLSYDLSQNP---IQSSSSEITLSFKTWQRNGLI 300
Query: 355 LWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQT--KINNGVWHRLTVHRNFMVV 412
L TG +S D++ L + +G ++ K N+ WH + V RN V
Sbjct: 301 LHTG--KSADYVNLALKDGAVSLVINLGSGAFEAIVEPVNGKFNDNAWHDVKVTRNLRQV 358
Score = 155 (59.6 bits), Expect = 1.7e-12, Sum P(4) = 1.7e-12
Identities = 44/166 (26%), Positives = 80/166 (48%)
Query: 86 VPQFNGSSYLRYQGLGEQYL--SLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLND 143
V F GS YL Y L + + S ++T+ FK + NG++L+ G AD ++ L L D
Sbjct: 262 VATFRGSEYLSYD-LSQNPIQSSSSEITLSFKTWQRNGLILHTGKSAD----YVNLALKD 316
Query: 144 RYVDFTFDLGTGA--ATLRSSN-PISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPF 200
V +LG+GA A + N + WH +++TR R + VD ++ + +
Sbjct: 317 GAVSLVINLGSGAFEAIVEPVNGKFNDNAWHDVKVTRNLRQVTISVDGILTTTGYTQEDY 376
Query: 201 TQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNI 246
T G P + P + ++F+GC+++V+ N+++ +
Sbjct: 377 TMLGSDDSSYVGPSPSTADL-PGSPVSNNFMGCLKEVVYKNNDIRL 421
Score = 139 (54.0 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 37/150 (24%), Positives = 72/150 (48%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCPL-GFTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQYL 105
C + C + G C+ C C + ++G+ C + +G L ++
Sbjct: 1057 CQEDSCANQGVCMQQWEGFTCDCSMTSYSGNQCNDPGATYIFGKSGGLILYTWPANDRPS 1116
Query: 106 SLLD-LTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSN- 163
+ D L + F +G+L+ A G+GDF+ L++ + F++GT +++
Sbjct: 1117 TRSDRLAVGFSTTVKDGVLV-RIDSAPGLGDFLQLHIEQGKIGVVFNIGTVDISIKEERT 1175
Query: 164 PISLGEWHKLRLTRTGRHAYLQVDRFPSSQ 193
P++ G++H +R TR G +A LQVD +P ++
Sbjct: 1176 PVNDGKYHVVRFTRNGANATLQVDNWPVNE 1205
Score = 125 (49.1 bits), Expect = 2.3e-07, Sum P(3) = 2.3e-07
Identities = 73/329 (22%), Positives = 129/329 (39%)
Query: 114 FKAIEPNG-ILLYNG---HRADGVG------DFIALYLNDRYVDFTFDLGTGAATLRSSN 163
F+ EPNG ILL +G R D DF A+ L D + D+G+G ++++
Sbjct: 479 FRTTEPNGLILLTHGKPQERKDVRSQKNTKVDFFAVELLDGNLYLLLDMGSGTIKVKATQ 538
Query: 164 P-ISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYN--IV 220
+ GEW+ + + R GR + V+ + + G GG+P+ ++
Sbjct: 539 KKANDGEWYHVDIQRDGRSGTISVNS-RRTPFTASGQSEILDLEGDMYLGGLPENRAGLI 597
Query: 221 SPK----VKIKSSFIGCIQKVLINNHELNI--LGEAIQGVNVVN-C----AHPCITQPCG 269
P + ++GCI+ + I+ NI L E V + C A C + PC
Sbjct: 598 LPTELWTAMLNYGYVGCIRDLFIDGRSKNIRQLAEMQNAAGVKSSCSRMSAKQCDSYPCK 657
Query: 270 SGS-CVPLYDGYKCVCTQSCKESHLTE--VMCASFDHGASFLHYLDPEIIHSSGLLHYKF 326
+ + C ++ + C CT + E S+D G+ ++ + P ++H+
Sbjct: 658 NNAVCKDGWNRFICDCTGTGYWGRTCEREASILSYD-GSMYMKVIMPMVMHTEA------ 710
Query: 327 QLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXX 386
E ++ R + + GL++ T S S D L L + G +M
Sbjct: 711 -----------E-DVSFRFMSQRAYGLLVATTSRDSADTLRLELDGGRVKLMVNLDCIRI 758
Query: 387 XXXXXQ--------TKINNGVWHRLTVHR 407
+ K+N+ WH + V R
Sbjct: 759 NCNSSKGPETLYAGQKLNDNEWHTVRVVR 787
Score = 80 (33.2 bits), Expect = 6.0e-16, Sum P(2) = 6.0e-16
Identities = 20/53 (37%), Positives = 24/53 (45%)
Query: 44 EDKCNKTPCEHGGKCITTPGSSYCLCPL-GFTGDLCQTRLDLQVPQFNGSSYL 95
E C + PCE+GG C G C C G+ G LC V Q G S+L
Sbjct: 199 EGPCGERPCENGGICFLLDGHPTCDCSTTGYGGTLCSE----DVSQGPGLSHL 247
Score = 67 (28.6 bits), Expect = 8.8e-11, Sum P(2) = 8.8e-11
Identities = 18/77 (23%), Positives = 35/77 (45%)
Query: 436 RLHRTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVEDIEELTRSKYHHSFKGWI 495
++ R +Q I +D + + + L +D YVG +L S ++F G +
Sbjct: 350 KVTRNLRQVTISVDGILTTTGYTQEDYTMLGSDDSSYVGPSPSTADLPGSPVSNNFMGCL 409
Query: 496 SNLILSNDYQVKLPLSR 512
++ N+ ++L LSR
Sbjct: 410 KEVVYKNN-DIRLELSR 425
Score = 61 (26.5 bits), Expect = 1.7e-12, Sum P(4) = 1.7e-12
Identities = 19/81 (23%), Positives = 35/81 (43%)
Query: 340 NIDMRIKTSSSSGLILWT-GSSQSK-----------DFLALGIHNGYAHVMYXXXXXXXX 387
+I +T+ +GLIL T G Q + DF A+ + +G +++
Sbjct: 474 SISFDFRTTEPNGLILLTHGKPQERKDVRSQKNTKVDFFAVELLDGNLYLLLDMGSGTIK 533
Query: 388 XXXXQTKINNGVWHRLTVHRN 408
Q K N+G W+ + + R+
Sbjct: 534 VKATQKKANDGEWYHVDIQRD 554
Score = 48 (22.0 bits), Expect = 1.7e-12, Sum P(4) = 1.7e-12
Identities = 16/59 (27%), Positives = 31/59 (52%)
Query: 446 IRIDTDYSMQSISGGKFEQLNTD---SGLYVGGVEDIEELTRSKYHHSFKGWISNLILS 501
+++DT Q I+G K L D +GL G ++ +L S+ F+G ++++ L+
Sbjct: 973 LKVDTKVVTQVINGAKNLDLKGDLYMAGLAQGMYSNLPKLVASR--DGFQGCLASVDLN 1029
Score = 43 (20.2 bits), Expect = 5.3e-12, Sum P(4) = 5.3e-12
Identities = 19/101 (18%), Positives = 47/101 (46%)
Query: 437 LHRTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVEDIE-------ELTRSKYHH 489
+ R G+ I +++ + + SG + E L+ + +Y+GG+ + EL + ++
Sbjct: 551 IQRDGRSGTISVNSRRTPFTASG-QSEILDLEGDMYLGGLPENRAGLILPTELWTAMLNY 609
Query: 490 SFKGWISNLILSNDYQVKLPLSRSQGSS-CQLTCETLNTGQ 529
+ G I +L + + L+ Q ++ + +C ++ Q
Sbjct: 610 GYVGCIRDLFIDGRSKNIRQLAEMQNAAGVKSSCSRMSAKQ 650
Score = 37 (18.1 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 6/10 (60%), Positives = 9/10 (90%)
Query: 11 DDWNTVRVFR 20
++W+TVRV R
Sbjct: 778 NEWHTVRVVR 787
>UNIPROTKB|Q07310 [details] [associations]
symbol:Nrxn3 "Neurexin-3" species:10116 "Rattus norvegicus"
[GO:0004872 "receptor activity" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007416 "synapse assembly"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR000742 InterPro:IPR027149 PROSITE:PS50026 SMART:SM00181
InterPro:IPR000152 RGD:620212 GO:GO:0016021 GO:GO:0005886
GO:GO:0005576 GO:GO:0046872 GO:GO:0007155 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0007416 PROSITE:PS01186 InterPro:IPR001791
SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025 GO:GO:0007269
GO:GO:0005246 Pfam:PF02210 InterPro:IPR003585 SMART:SM00294
eggNOG:NOG302266 HOGENOM:HOG000230481 HOVERGEN:HBG052670 KO:K07377
OrthoDB:EOG41G339 CTD:9369 PANTHER:PTHR10127:SF405 EMBL:L14851
IPI:IPI00476688 IPI:IPI00829422 IPI:IPI00829428 IPI:IPI00829441
IPI:IPI00829447 IPI:IPI00829448 IPI:IPI00829450 IPI:IPI00829453
IPI:IPI00829456 IPI:IPI00829461 IPI:IPI00829465 IPI:IPI00829472
IPI:IPI00829491 IPI:IPI00829492 IPI:IPI00829495 IPI:IPI00829499
IPI:IPI00829500 IPI:IPI00829503 IPI:IPI00829509 PIR:I48216
RefSeq:NP_446269.2 UniGene:Rn.10926 ProteinModelPortal:Q07310
SMR:Q07310 STRING:Q07310 PhosphoSite:Q07310 PRIDE:Q07310
GeneID:116508 KEGG:rno:116508 UCSC:RGD:620212 NextBio:619125
ArrayExpress:Q07310 Genevestigator:Q07310
GermOnline:ENSRNOG00000024722 Uniprot:Q07310
Length = 1578
Score = 207 (77.9 bits), Expect = 6.0e-16, Sum P(2) = 6.0e-16
Identities = 78/327 (23%), Positives = 142/327 (43%)
Query: 92 SSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFD 151
SSYL L + Y S+ L FK +G +L+N DG +FIA+ L Y+ + FD
Sbjct: 883 SSYLTLATL-QAYTSM-HLFFQFKTTSADGFILFNS--GDG-NNFIAVELVKGYIHYVFD 937
Query: 152 LGTGAATLR--SSNPISLGEWHKLRLTRTGRHAY-LQVDRFPSSQILSPGPFTQXXXXXX 208
LG G ++ S P++ +WH + +TR + + L+VD +Q+++
Sbjct: 938 LGNGPNVIKGNSDRPLNDNQWHNVVITRDNSNTHSLKVDTKVVTQVINGAKNLDLKGDLY 997
Query: 209 XXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVN--CAHP---C 263
Y+ + V + F GC+ V +N +++ +A+ ++ C P C
Sbjct: 998 MAGLAQGMYSNLPKLVASRDGFQGCLASVDLNGRLPDLINDALHRSGQIDRGCEGPSTTC 1057
Query: 264 ITQPCGS-GSCVPLYDGYKCVCTQSCKESHLTEVMCASFDHGASFLHYLDPEIIHSSGLL 322
C + G C+ ++G+ C C+ + + C D GA+++ S GL+
Sbjct: 1058 QEDSCANQGVCMQQWEGFTCDCSMTSYSGN----QCN--DPGATYIFG------KSGGLI 1105
Query: 323 HYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSK-DFLALGIHNGYAHVMYXX 381
Y + + D T + + + T+ G+++ S+ DFL L I G V++
Sbjct: 1106 LYTWPAN-DRPSTRSD-RLAVGFSTTVKDGVLVRIDSAPGLGDFLQLHIEQGKIGVVFNI 1163
Query: 382 XXXXXXXXXXQTKINNGVWHRLTVHRN 408
+T +N+G +H + RN
Sbjct: 1164 GTVDISIKEERTPVNDGKYHVVRFTRN 1190
Score = 172 (65.6 bits), Expect = 8.8e-11, Sum P(2) = 8.8e-11
Identities = 90/360 (25%), Positives = 136/360 (37%)
Query: 84 LQVPQFNGSSY-----LRYQGLGEQYLSLL--------DLTIVFKAIEPNGILLYNGHRA 130
L+V F GS L + GL Q+ L DL+ FK G+LLY
Sbjct: 12 LKVSSFLGSLVGLCLGLEFMGLPNQWARYLRWDASTRSDLSFQFKTNVSTGLLLYLDD-- 69
Query: 131 DGVGDFIALYLNDRYVDFTFDLGTGAATLRSSNPISLGEWHKLRLTRTGRHAYLQVD-RF 189
GV DF+ L L D V F + T+ S+ ++ WH L ++R L +D
Sbjct: 70 GGVCDFLCLSLVDGRVQLRFSMDCAETTVLSNKQVNDSSWHFLMVSRDRVRTGLVIDGEG 129
Query: 190 PSSQILSPGPFTQXXXXXXXXXGGVPDYN---IVSPKVKIKSSFIGCIQKVLINNHELNI 246
S ++ + P+ GG D + V+ F G + + N E +
Sbjct: 130 QSGELRAQRPYMDVVSDLFLG-GGPADIRPSALTLDGVQNMPGFKGLMLDLKYGNSEPRL 188
Query: 247 LGEAIQGVNVVNCAHPCITQPCGSGSCVPLYDGYK-CVCTQS------CKES-----HLT 294
LG Q V + PC +PC +G L DG+ C C+ + C E L+
Sbjct: 189 LGS--QSVQL-EAEGPCGERPCENGGICFLLDGHPTCDCSTTGYGGTLCSEDVSQGPGLS 245
Query: 295 EVMCASFDHGASFLHYLDPEIIHSSGLLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLI 354
+M + + G S + S L Y + I I + KT +GLI
Sbjct: 246 HLMMS--EQGRSKAREENVATFRGSEYLSYDLSQNP---IQSSSSEITLSFKTWQRNGLI 300
Query: 355 LWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQT--KINNGVWHRLTVHRNFMVV 412
L TG +S D++ L + +G ++ K N+ WH + V RN V
Sbjct: 301 LHTG--KSADYVNLALKDGAVSLVINLGSGAFEAIVEPVNGKFNDNAWHDVKVTRNLRQV 358
Score = 155 (59.6 bits), Expect = 1.7e-12, Sum P(4) = 1.7e-12
Identities = 44/166 (26%), Positives = 80/166 (48%)
Query: 86 VPQFNGSSYLRYQGLGEQYL--SLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLND 143
V F GS YL Y L + + S ++T+ FK + NG++L+ G AD ++ L L D
Sbjct: 262 VATFRGSEYLSYD-LSQNPIQSSSSEITLSFKTWQRNGLILHTGKSAD----YVNLALKD 316
Query: 144 RYVDFTFDLGTGA--ATLRSSN-PISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPF 200
V +LG+GA A + N + WH +++TR R + VD ++ + +
Sbjct: 317 GAVSLVINLGSGAFEAIVEPVNGKFNDNAWHDVKVTRNLRQVTISVDGILTTTGYTQEDY 376
Query: 201 TQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNI 246
T G P + P + ++F+GC+++V+ N+++ +
Sbjct: 377 TMLGSDDSSYVGPSPSTADL-PGSPVSNNFMGCLKEVVYKNNDIRL 421
Score = 139 (54.0 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 37/150 (24%), Positives = 72/150 (48%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCPL-GFTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQYL 105
C + C + G C+ C C + ++G+ C + +G L ++
Sbjct: 1057 CQEDSCANQGVCMQQWEGFTCDCSMTSYSGNQCNDPGATYIFGKSGGLILYTWPANDRPS 1116
Query: 106 SLLD-LTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSN- 163
+ D L + F +G+L+ A G+GDF+ L++ + F++GT +++
Sbjct: 1117 TRSDRLAVGFSTTVKDGVLV-RIDSAPGLGDFLQLHIEQGKIGVVFNIGTVDISIKEERT 1175
Query: 164 PISLGEWHKLRLTRTGRHAYLQVDRFPSSQ 193
P++ G++H +R TR G +A LQVD +P ++
Sbjct: 1176 PVNDGKYHVVRFTRNGANATLQVDNWPVNE 1205
Score = 125 (49.1 bits), Expect = 2.3e-07, Sum P(3) = 2.3e-07
Identities = 73/329 (22%), Positives = 129/329 (39%)
Query: 114 FKAIEPNG-ILLYNG---HRADGVG------DFIALYLNDRYVDFTFDLGTGAATLRSSN 163
F+ EPNG ILL +G R D DF A+ L D + D+G+G ++++
Sbjct: 479 FRTTEPNGLILLTHGKPQERKDVRSQKNTKVDFFAVELLDGNLYLLLDMGSGTIKVKATQ 538
Query: 164 P-ISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYN--IV 220
+ GEW+ + + R GR + V+ + + G GG+P+ ++
Sbjct: 539 KKANDGEWYHVDIQRDGRSGTISVNS-RRTPFTASGQSEILDLEGDMYLGGLPENRAGLI 597
Query: 221 SPK----VKIKSSFIGCIQKVLINNHELNI--LGEAIQGVNVVN-C----AHPCITQPCG 269
P + ++GCI+ + I+ NI L E V + C A C + PC
Sbjct: 598 LPTELWTAMLNYGYVGCIRDLFIDGRSKNIRQLAEMQNAAGVKSSCSRMSAKQCDSYPCK 657
Query: 270 SGS-CVPLYDGYKCVCTQSCKESHLTE--VMCASFDHGASFLHYLDPEIIHSSGLLHYKF 326
+ + C ++ + C CT + E S+D G+ ++ + P ++H+
Sbjct: 658 NNAVCKDGWNRFICDCTGTGYWGRTCEREASILSYD-GSMYMKVIMPMVMHTEA------ 710
Query: 327 QLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXX 386
E ++ R + + GL++ T S S D L L + G +M
Sbjct: 711 -----------E-DVSFRFMSQRAYGLLVATTSRDSADTLRLELDGGRVKLMVNLDCIRI 758
Query: 387 XXXXXQ--------TKINNGVWHRLTVHR 407
+ K+N+ WH + V R
Sbjct: 759 NCNSSKGPETLYAGQKLNDNEWHTVRVVR 787
Score = 80 (33.2 bits), Expect = 6.0e-16, Sum P(2) = 6.0e-16
Identities = 20/53 (37%), Positives = 24/53 (45%)
Query: 44 EDKCNKTPCEHGGKCITTPGSSYCLCPL-GFTGDLCQTRLDLQVPQFNGSSYL 95
E C + PCE+GG C G C C G+ G LC V Q G S+L
Sbjct: 199 EGPCGERPCENGGICFLLDGHPTCDCSTTGYGGTLCSE----DVSQGPGLSHL 247
Score = 67 (28.6 bits), Expect = 8.8e-11, Sum P(2) = 8.8e-11
Identities = 18/77 (23%), Positives = 35/77 (45%)
Query: 436 RLHRTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVEDIEELTRSKYHHSFKGWI 495
++ R +Q I +D + + + L +D YVG +L S ++F G +
Sbjct: 350 KVTRNLRQVTISVDGILTTTGYTQEDYTMLGSDDSSYVGPSPSTADLPGSPVSNNFMGCL 409
Query: 496 SNLILSNDYQVKLPLSR 512
++ N+ ++L LSR
Sbjct: 410 KEVVYKNN-DIRLELSR 425
Score = 61 (26.5 bits), Expect = 1.7e-12, Sum P(4) = 1.7e-12
Identities = 19/81 (23%), Positives = 35/81 (43%)
Query: 340 NIDMRIKTSSSSGLILWT-GSSQSK-----------DFLALGIHNGYAHVMYXXXXXXXX 387
+I +T+ +GLIL T G Q + DF A+ + +G +++
Sbjct: 474 SISFDFRTTEPNGLILLTHGKPQERKDVRSQKNTKVDFFAVELLDGNLYLLLDMGSGTIK 533
Query: 388 XXXXQTKINNGVWHRLTVHRN 408
Q K N+G W+ + + R+
Sbjct: 534 VKATQKKANDGEWYHVDIQRD 554
Score = 48 (22.0 bits), Expect = 1.7e-12, Sum P(4) = 1.7e-12
Identities = 16/59 (27%), Positives = 31/59 (52%)
Query: 446 IRIDTDYSMQSISGGKFEQLNTD---SGLYVGGVEDIEELTRSKYHHSFKGWISNLILS 501
+++DT Q I+G K L D +GL G ++ +L S+ F+G ++++ L+
Sbjct: 973 LKVDTKVVTQVINGAKNLDLKGDLYMAGLAQGMYSNLPKLVASR--DGFQGCLASVDLN 1029
Score = 43 (20.2 bits), Expect = 5.3e-12, Sum P(4) = 5.3e-12
Identities = 19/101 (18%), Positives = 47/101 (46%)
Query: 437 LHRTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVEDIE-------ELTRSKYHH 489
+ R G+ I +++ + + SG + E L+ + +Y+GG+ + EL + ++
Sbjct: 551 IQRDGRSGTISVNSRRTPFTASG-QSEILDLEGDMYLGGLPENRAGLILPTELWTAMLNY 609
Query: 490 SFKGWISNLILSNDYQVKLPLSRSQGSS-CQLTCETLNTGQ 529
+ G I +L + + L+ Q ++ + +C ++ Q
Sbjct: 610 GYVGCIRDLFIDGRSKNIRQLAEMQNAAGVKSSCSRMSAKQ 650
Score = 37 (18.1 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 6/10 (60%), Positives = 9/10 (90%)
Query: 11 DDWNTVRVFR 20
++W+TVRV R
Sbjct: 778 NEWHTVRVVR 787
>UNIPROTKB|Q0V8S9 [details] [associations]
symbol:CNTNAP5 "Contactin-associated protein-like 5"
species:9031 "Gallus gallus" [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR000421 InterPro:IPR000742 Pfam:PF00754 PROSITE:PS01285
PROSITE:PS01286 PROSITE:PS50022 PROSITE:PS50026 SMART:SM00181
SMART:SM00231 INTERPRO:IPR002181 GO:GO:0016021 GO:GO:0007165
GO:GO:0007155 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 InterPro:IPR008979 SUPFAM:SSF49785
InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025 SUPFAM:SSF56496
PROSITE:PS00514 PROSITE:PS51406 Pfam:PF02210 HOVERGEN:HBG057718
eggNOG:NOG291100 HOGENOM:HOG000230964 CTD:129684 OrthoDB:EOG441Q9K
EMBL:BN000918 IPI:IPI00786784 RefSeq:NP_001041544.1
UniGene:Gga.14193 UniGene:Gga.49157 ProteinModelPortal:Q0V8S9
GeneID:424231 KEGG:gga:424231 InParanoid:Q0V8S9 NextBio:20826590
ArrayExpress:Q0V8S9 Uniprot:Q0V8S9
Length = 1305
Score = 206 (77.6 bits), Expect = 1.0e-15, Sum P(2) = 1.0e-15
Identities = 87/360 (24%), Positives = 152/360 (42%)
Query: 89 FNG-SSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLND-RYV 146
FN +SYL + + + D++ FK +G+ L N G+ DFI + + + +
Sbjct: 795 FNTEASYLHFPTFHAEVSA--DISFFFKTTSLSGVFLENL----GMKDFIRVEIRSPKEI 848
Query: 147 DFTFDLGTGA--ATLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSP--GPFTQ 202
F+ D+G G AT++S P++ +WH +R R + LQVD P + +P G F +
Sbjct: 849 TFSIDVGNGPTEATVQSPTPLNDNQWHYVRAERNLKQTSLQVDNLPKKVLEAPAEGHF-R 907
Query: 203 XXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVV-NCAH 261
GG + F+GCI+ + +N +L++ A V C
Sbjct: 908 LQLNSQLFVGGTASR---------QKGFLGCIRSLHLNGQKLDLEERAKMTPGVKPGCPG 958
Query: 262 PCITQP--C-GSGSCVPLYDGYKCVCTQSCKESHLT-EVMCASFDHGASFLH-YLDPEII 316
C + C G CV Y+GY C CT S E E + A F+ G S + + +P +
Sbjct: 959 HCSSYGNLCHNGGKCVEKYNGYSCDCTSSAYEGPFCKEEVSALFEAGTSITYIFQEPYPV 1018
Query: 317 HSSGLLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIH-NGYA 375
+ ++ D IT E NI T+ + L+L+ ++ ++LA+ + NG
Sbjct: 1019 TKNASTSSS-AIYAD-AITSKE-NIAFSFLTAHAPSLLLYI-NTYFHEYLAVILSKNGSL 1074
Query: 376 HVMYXXXXXXXXXXXXQT-KINNGVWHRLTVHRNF--MVVMHGSSHTRSNKSSKIEFKCL 432
V Y + N H + ++R +++ + S+I+FK +
Sbjct: 1075 QVRYKLSKDGLLIFTIDSGNFANREMHHVKINREGRELIIQVDQVIKLKHNFSEIDFKAI 1134
Score = 77 (32.2 bits), Expect = 1.0e-15, Sum P(2) = 1.0e-15
Identities = 14/41 (34%), Positives = 21/41 (51%)
Query: 43 LEDKCNKTPCEHGGKCITTPGSSYCLC-PLGFTGDLCQTRL 82
++D+C CEHGGKC + + YC C + G C +
Sbjct: 546 IKDRCLPNYCEHGGKCSQSWTTFYCDCNDTSYMGATCHNSI 586
>UNIPROTKB|F1NW79 [details] [associations]
symbol:CNTNAP5 "Contactin-associated protein-like 5"
species:9031 "Gallus gallus" [GO:0007155 "cell adhesion"
evidence=IEA] InterPro:IPR000421 InterPro:IPR000742 Pfam:PF00754
PROSITE:PS01285 PROSITE:PS01286 PROSITE:PS50022 PROSITE:PS50026
SMART:SM00181 SMART:SM00231 INTERPRO:IPR002181 GO:GO:0007165
GO:GO:0007155 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 InterPro:IPR008979
SUPFAM:SSF49785 InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025
SUPFAM:SSF56496 PROSITE:PS51406 Pfam:PF02210
GeneTree:ENSGT00560000076804 IPI:IPI00786784 OMA:FANRRMH
EMBL:AADN02016829 EMBL:AADN02016830 EMBL:AADN02016831
Ensembl:ENSGALT00000018885 ArrayExpress:F1NW79 Uniprot:F1NW79
Length = 1306
Score = 206 (77.6 bits), Expect = 1.0e-15, Sum P(2) = 1.0e-15
Identities = 87/360 (24%), Positives = 152/360 (42%)
Query: 89 FNG-SSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLND-RYV 146
FN +SYL + + + D++ FK +G+ L N G+ DFI + + + +
Sbjct: 796 FNTEASYLHFPTFHAEVSA--DISFFFKTTSLSGVFLENL----GMKDFIRVEIRSPKEI 849
Query: 147 DFTFDLGTGA--ATLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSP--GPFTQ 202
F+ D+G G AT++S P++ +WH +R R + LQVD P + +P G F +
Sbjct: 850 TFSIDVGNGPTEATVQSPTPLNDNQWHYVRAERNLKQTSLQVDNLPKKVLEAPAEGHF-R 908
Query: 203 XXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVV-NCAH 261
GG + F+GCI+ + +N +L++ A V C
Sbjct: 909 LQLNSQLFVGGTASR---------QKGFLGCIRSLHLNGQKLDLEERAKMTPGVKPGCPG 959
Query: 262 PCITQP--C-GSGSCVPLYDGYKCVCTQSCKESHLT-EVMCASFDHGASFLH-YLDPEII 316
C + C G CV Y+GY C CT S E E + A F+ G S + + +P +
Sbjct: 960 HCSSYGNLCHNGGKCVEKYNGYSCDCTSSAYEGPFCKEEVSALFEAGTSITYIFQEPYPV 1019
Query: 317 HSSGLLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIH-NGYA 375
+ ++ D IT E NI T+ + L+L+ ++ ++LA+ + NG
Sbjct: 1020 TKNASTSSS-AIYAD-AITSKE-NIAFSFLTAHAPSLLLYI-NTYFHEYLAVILSKNGSL 1075
Query: 376 HVMYXXXXXXXXXXXXQT-KINNGVWHRLTVHRNF--MVVMHGSSHTRSNKSSKIEFKCL 432
V Y + N H + ++R +++ + S+I+FK +
Sbjct: 1076 QVRYKLSKDGLLIFTIDSGNFANREMHHVKINREGRELIIQVDQVIKLKHNFSEIDFKAI 1135
Score = 77 (32.2 bits), Expect = 1.0e-15, Sum P(2) = 1.0e-15
Identities = 14/41 (34%), Positives = 21/41 (51%)
Query: 43 LEDKCNKTPCEHGGKCITTPGSSYCLC-PLGFTGDLCQTRL 82
++D+C CEHGGKC + + YC C + G C +
Sbjct: 547 IKDRCLPNYCEHGGKCSQSWTTFYCDCNDTSYMGATCHNSI 587
>UNIPROTKB|Q0V8T0 [details] [associations]
symbol:CNTNAP5 "Contactin-associated protein-like 5"
species:9615 "Canis lupus familiaris" [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA]
InterPro:IPR000421 InterPro:IPR000742 Pfam:PF00754 PROSITE:PS01285
PROSITE:PS01286 PROSITE:PS50022 PROSITE:PS50026 SMART:SM00181
SMART:SM00231 INTERPRO:IPR002181 GO:GO:0016021 GO:GO:0007165
GO:GO:0007155 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 InterPro:IPR008979 SUPFAM:SSF49785
InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025 SUPFAM:SSF56496
PROSITE:PS00514 PROSITE:PS51406 Pfam:PF02210 HOVERGEN:HBG057718
eggNOG:NOG291100 HOGENOM:HOG000230964 EMBL:AAEX02006971
EMBL:AAEX02006972 EMBL:AAEX02006973 EMBL:AAEX02006974
EMBL:AAEX02006975 EMBL:AAEX02006976 EMBL:AAEX02006977 EMBL:BN000917
RefSeq:NP_001041573.1 UniGene:Cfa.39078 ProteinModelPortal:Q0V8T0
GeneID:483874 KEGG:cfa:483874 CTD:129684 InParanoid:Q0V8T0
OrthoDB:EOG441Q9K NextBio:20858199 Uniprot:Q0V8T0
Length = 1305
Score = 199 (75.1 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 89/360 (24%), Positives = 145/360 (40%)
Query: 89 FNGSSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLND-RYVD 147
+ +SYL + ++ + D++ FK +G+ L N G+ DFI L ++ +
Sbjct: 796 YTEASYLHFPTFHAEFSA--DISFFFKTTALSGVFLENL----GIKDFIRLEISSPSEIT 849
Query: 148 FTFDLGTGAATLRSSNPISLGE--WHKLRLTRTGRHAYLQVDRFP--SSQILSPGPFTQX 203
F D+G G L +P L + WH +R R + LQVD P + + G F +
Sbjct: 850 FAIDVGNGPVELIVHSPSLLNDNQWHYIRAERNLKETSLQVDSLPRMTRETSEEGHF-RL 908
Query: 204 XXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEA--IQGVNVVNCAH 261
GG S + K F+GCI+ + +N +L++ A GV C
Sbjct: 909 QLNSQLFVGGT------SSRQK---GFLGCIRSLHLNGQKLDLEERAKVTSGVRP-GCPG 958
Query: 262 PCITQP--C-GSGSCVPLYDGYKCVCTQSCKESHLTEV-MCASFDHGASFLHYLDPEIIH 317
C T C G CV Y GY C CT S E + + A F+ G S +
Sbjct: 959 HCSTYGSICHNGGKCVEKYSGYFCDCTNSPYEGPFCKKEVSAVFEAGTSVTYMFQEPYPV 1018
Query: 318 SSGLLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGI-HNGYAH 376
+ + ++ D + + NI T+ + L+L+ SSQ D+LA+ + NG
Sbjct: 1019 TKNISLSSSAIYADAAPS--KENIAFSFVTAQAPSLLLYINSSQ--DYLAVLLCKNGSLQ 1074
Query: 377 VMYXXXXXXXXXXXXQTK-INNGVWHRLTVHRN---FMVVMHGSSHTRSNKSSKIEFKCL 432
V Y + N H L ++R + + N SS++EF+ +
Sbjct: 1075 VRYQLSKEETQVFNIDAENFANRRMHHLKINREGRELAIQVDHQLRLSYNFSSEVEFRAI 1134
Score = 131 (51.2 bits), Expect = 4.6e-07, Sum P(2) = 4.6e-07
Identities = 52/209 (24%), Positives = 91/209 (43%)
Query: 78 CQTRLDLQVPQFNGSSYLRYQGLGEQYLSLLD--LTIVFKAIEPNGILLYN-GHRADGVG 134
C + D V F+G S L Y+ ++ +S L +++ FK+++ +G+L + G R G
Sbjct: 174 CSYKSD--VADFDGRSSLLYR-FNQKLMSTLKDVISLKFKSMQGDGVLFHGEGQR----G 226
Query: 135 DFIALYLNDRYVDFTFDLGTGAATLRSSNP-ISLG------EWHKLRLTRTGRHAYLQVD 187
D I L L + +L L SS P ++LG +WH + + R G+ VD
Sbjct: 227 DHITLELQKGRLALHLNLDDSKPRLSSSPPSVTLGSLLDDQQWHSVLIERVGKQVNFSVD 286
Query: 188 RFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNIL 247
+ + + G GG+P P +K +F GCI+ + N +NI+
Sbjct: 287 KH-TQHFRTKGEADALDIDYELSFGGIPVPG--KPGTFLKKNFHGCIENLYYNG--VNII 341
Query: 248 GEAIQGVNVVNCAHPCITQPCGSGSCVPL 276
A + + + + +T C VP+
Sbjct: 342 DLAKRRKHQIYTGN--VTFSCSEPQIVPI 368
Score = 84 (34.6 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 16/41 (39%), Positives = 22/41 (53%)
Query: 43 LEDKCNKTPCEHGGKCITTPGSSYCLCP-LGFTGDLCQTRL 82
++D+C CEHGG C + + YC C G+TG C L
Sbjct: 546 IKDRCLPNYCEHGGFCSQSWTTFYCNCSNTGYTGATCHNSL 586
Score = 72 (30.4 bits), Expect = 4.6e-07, Sum P(2) = 4.6e-07
Identities = 13/67 (19%), Positives = 31/67 (46%)
Query: 340 NIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGV 399
++ + +T + GL+L T S+ L L + G ++ + +N+G+
Sbjct: 390 SVSFQFRTWNKDGLLLSTELSEGSGTLLLSLEGGTVRLVIQKMTERTAEILTGSSLNDGL 449
Query: 400 WHRLTVH 406
WH ++++
Sbjct: 450 WHSVSIN 456
>UNIPROTKB|F5H0L2 [details] [associations]
symbol:CRB1 "Protein crumbs homolog 1" species:9606 "Homo
sapiens" [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 SMART:SM00179
SMART:SM00181 InterPro:IPR000152 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186
InterPro:IPR001791 SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025
Pfam:PF02210 Pfam:PF12661 KO:K16681 EMBL:AL513325 EMBL:AL136322
EMBL:AL139136 EMBL:AL356315 RefSeq:NP_001244894.1 UniGene:Hs.126135
GeneID:23418 KEGG:hsa:23418 CTD:23418 HGNC:HGNC:2343
IPI:IPI01009270 ProteinModelPortal:F5H0L2 SMR:F5H0L2
Ensembl:ENST00000535699 UCSC:uc010poz.2 ArrayExpress:F5H0L2
Bgee:F5H0L2 Uniprot:F5H0L2
Length = 1382
Score = 173 (66.0 bits), Expect = 1.4e-15, Sum P(3) = 1.4e-15
Identities = 68/263 (25%), Positives = 109/263 (41%)
Query: 47 CNKTPCEHGGKCIT--TPGSS--YCLCPLGFTGDLCQTRLDLQVPQFNGSSYLRYQ-GLG 101
C C + G CI G CLCP G+TG LC+ L F G +L + G
Sbjct: 376 CTHQQCLNNGTCIPHFQDGQHGFSCLCPSGYTGSLCEIATTLS---FEGDGFLWVKSGSV 432
Query: 102 EQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRS 161
S+ ++ + F+ ++P +LL+ +R F+ L L Y+ + + + L
Sbjct: 433 TTKGSVCNIALRFQTVQPMALLLFRSNR----DVFVKLELLSGYIHLSIQVNNQSKVLLF 488
Query: 162 -SNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILS--PGPFTQXXXXXX---XXXGGVP 215
S+ S GEWH + + +D + ++ P P GG+P
Sbjct: 489 ISHNTSDGEWHFVEVIFAEAVTLTLIDDSCKEKCIAKAPTPLESDQSICAFQNSFLGGLP 548
Query: 216 DYNIVSPKVKIKS--------SFIGCIQKVLIN-NH-ELNILGEAIQGVNV-VNCAHP-- 262
+ S V + + SF+GC+Q + I+ NH L + +NV C
Sbjct: 549 -VGMTSNGVALLNFYNMPSTPSFVGCLQDIKIDWNHITLENISSG-SSLNVKAGCVRKDW 606
Query: 263 CITQPCGS-GSCVPLYDGYKCVC 284
C +QPC S G C+ L+ Y+C C
Sbjct: 607 CESQPCQSRGRCINLWLSYQCDC 629
Score = 116 (45.9 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 55/250 (22%), Positives = 102/250 (40%)
Query: 29 LNDGNKIKGRSKECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLC-QTRLDLQVP 87
++ G+ + ++ +D C PC+ G+CI S C C + G C + + +
Sbjct: 589 ISSGSSLNVKAGCVRKDWCESQPCQSRGRCINLWLSYQCDCHRPYEGPNCLREYVAGRFG 648
Query: 88 QFNGSSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVD 147
Q + + Y+ + L E Y + L++ + ++P+G+LL + +I ++L +
Sbjct: 649 QDDSTGYVIFT-LDESYGDTISLSMFVRTLQPSGLLLA---LENSTYQYIRVWLERGRLA 704
Query: 148 FTFDLGTGAATLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILS--PGPFTQXXX 205
L + L ++ G H + L Y +++ + SSQ L +
Sbjct: 705 M---LTPNSPKLVVKFVLNDGNVHLISLKIK---PY-KIELYQSSQNLGFISASTWKIEK 757
Query: 206 XXXXXXGGVPDYNIVSPKVKIKSSFI-GCIQKVLINNHELNILGEAIQGVNVVNCAHPCI 264
GG+PD + ++ F GCIQ V +NN L ++ N +
Sbjct: 758 GDVIYIGGLPD----KQETELNGGFFKGCIQDVRLNNQNLEFFPNPTNNASL-NPVLVNV 812
Query: 265 TQPC-GSGSC 273
TQ C G SC
Sbjct: 813 TQGCAGDNSC 822
Score = 103 (41.3 bits), Expect = 0.00033, Sum P(4) = 0.00033
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 43 LEDKCNKTPCEHGGKCITTPG--SSYCLCPLGFTGDLCQTRL 82
++D C PC+ C+ TPG S C CP G++G +C+T +
Sbjct: 1 MKDPCFSNPCQGSATCVNTPGERSFLCKCPPGYSGTICETTI 42
Score = 84 (34.6 bits), Expect = 1.4e-15, Sum P(3) = 1.4e-15
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 42 CLED--KCNKTPCEHGGKCITTPGSSYCLCP 70
C ED +C+ PC++GG C PG+ C CP
Sbjct: 325 CEEDVNECSSNPCQNGGTCENLPGNYTCHCP 355
Score = 77 (32.2 bits), Expect = 0.00060, Sum P(3) = 0.00060
Identities = 37/133 (27%), Positives = 60/133 (45%)
Query: 229 SFIGCIQKVLIN-NH-ELNILGEAIQGVNV-VNCAHP--CITQPCGS-GSCVPLYDGYKC 282
SF+GC+Q + I+ NH L + +NV C C +QPC S G C+ L+ Y+C
Sbjct: 569 SFVGCLQDIKIDWNHITLENISSG-SSLNVKAGCVRKDWCESQPCQSRGRCINLWLSYQC 627
Query: 283 VCTQSCKESHLTEVMCASFDHGASFLHYLDPEIIHSSGLLHYKFQLHVDFRITGYEFNID 342
C + + + C ++ A D S+G + F L + G ++
Sbjct: 628 DCHRPYEGPN-----CLR-EYVAGRFGQDD-----STG--YVIFTLDESY---GDTISLS 671
Query: 343 MRIKTSSSSGLIL 355
M ++T SGL+L
Sbjct: 672 MFVRTLQPSGLLL 684
Score = 72 (30.4 bits), Expect = 1.4e-15, Sum P(3) = 1.4e-15
Identities = 53/273 (19%), Positives = 103/273 (37%)
Query: 265 TQPCGSGS-CVPLYDGYKCVCTQSCKESHLTEVMCASFD---HGASFLHYLDP-EIIHSS 319
+ PC +G C +D + C C EV F HGA L E I ++
Sbjct: 869 SNPCHNGGVCHSRWDDFSCSCPALTSGKACEEVQWCGFSPCPHGAQCQPVLQGFECIANA 928
Query: 320 GLLHYKFQL--HVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNG--YA 375
Q+ + IT NI +T ++ +IL + + +FL + I + +
Sbjct: 929 VFNGQSGQILFRSNGNITRELTNITFGFRTRDANVIILH--AEKEPEFLNISIQDSRLFF 986
Query: 376 HVMYXXXXXXXXXXXXQTKINNGVWHRLTVHRNFMVVMHGSSHTRSNKSSKIEFKCLSIQ 435
+ Q+ +N+G WH +T+ + + +S + ++ F +I
Sbjct: 987 QLQSGNSFYMLSLTSLQS-VNDGTWHEVTL--SMTDPLSQTSRWQMEVDNETPFVTSTIA 1043
Query: 436 RLHRTGKQCLIRIDTD-Y----SMQSISG--GKFEQLNTDSGLYVGGVEDIEELTRSKYH 488
TG ++ +TD Y ++ +I G G + G+Y+ E++
Sbjct: 1044 ----TGSLNFLKDNTDIYVGDRAIDNIKGLQGCLSTIEI-GGIYLSYFENVHGFINKPQE 1098
Query: 489 HSFKGWISNLILSNDYQVKLPLSRS--QGSSCQ 519
F +N +++ Q+ + S G +C+
Sbjct: 1099 EQFLKISTNSVVTGCLQLNVCNSNPCLHGGNCE 1131
Score = 68 (29.0 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 16/57 (28%), Positives = 27/57 (47%)
Query: 253 GVNVVNCA---HPCITQPCGSGS-CVPLYDGYKCVCTQS-----CKESHLTEVMCAS 300
G VNC C + C +G+ C+ +GY C+C + C++S L +C +
Sbjct: 1181 GYTGVNCEVDIDNCQSHQCANGATCISHTNGYSCLCFGNFTGKFCRQSRLPSTVCGN 1237
Score = 66 (28.3 bits), Expect = 0.00033, Sum P(4) = 0.00033
Identities = 16/41 (39%), Positives = 20/41 (48%)
Query: 263 CITQPCGSGS-CVPLYDGYKCVCTQSCKESHLT-EV-MCAS 300
C + PC +G+ C DGY C C + H EV CAS
Sbjct: 83 CASSPCQNGAVCQDGIDGYSCFCVPGYQGRHCDLEVDECAS 123
Score = 57 (25.1 bits), Expect = 1.0e-13, Sum P(4) = 1.0e-13
Identities = 10/31 (32%), Positives = 13/31 (41%)
Query: 263 CITQPC-GSGSCVPLYDGYKCVCTQSCKESH 292
C + PC G+C +Y Y C C H
Sbjct: 1119 CNSNPCLHGGNCEDIYSSYHCSCPLGWSGKH 1149
Score = 54 (24.1 bits), Expect = 0.00033, Sum P(4) = 0.00033
Identities = 16/66 (24%), Positives = 27/66 (40%)
Query: 340 NIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGV 399
NI +R +T L+L+ S F+ L + +GY H+ ++G
Sbjct: 440 NIALRFQTVQPMALLLFR--SNRDVFVKLELLSGYIHLSIQVNNQSKVLLFISHNTSDGE 497
Query: 400 WHRLTV 405
WH + V
Sbjct: 498 WHFVEV 503
Score = 53 (23.7 bits), Expect = 1.3e-13, Sum P(3) = 1.3e-13
Identities = 8/22 (36%), Positives = 10/22 (45%)
Query: 263 CITQPCGSGSCVPLYDGYKCVC 284
C + PC G+C Y C C
Sbjct: 1157 CFSNPCIHGNCSDRVAAYHCTC 1178
Score = 53 (23.7 bits), Expect = 1.2e-10, Sum P(4) = 1.2e-10
Identities = 6/15 (40%), Positives = 11/15 (73%)
Query: 45 DKCNKTPCEHGGKCI 59
++CN PC+ G+C+
Sbjct: 272 NECNSNPCQSNGECV 286
Score = 51 (23.0 bits), Expect = 2.0e-13, Sum P(3) = 2.0e-13
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 263 CITQPCGSGS-CVPLYDGYKCVC 284
C + PC +G C L + ++C+C
Sbjct: 1277 CASDPCVNGGLCQDLLNKFQCLC 1299
Score = 43 (20.2 bits), Expect = 1.3e-12, Sum P(3) = 1.3e-12
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 471 LYVGGVEDIEELTRSKYHHSFKGWISNLILSN 502
+Y+GG+ D +E + FKG I ++ L+N
Sbjct: 761 IYIGGLPDKQETELNGGF--FKGCIQDVRLNN 790
Score = 38 (18.4 bits), Expect = 1.0e-13, Sum P(4) = 1.0e-13
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 440 TGKQCLIRIDTDYSMQSISG 459
+GK C + ID +S I G
Sbjct: 1146 SGKHCELNIDECFSNPCIHG 1165
>MGI|MGI:3045256 [details] [associations]
symbol:Fat4 "FAT tumor suppressor homolog 4 (Drosophila)"
species:10090 "Mus musculus" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0007156 "homophilic
cell adhesion" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR002126 InterPro:IPR015919
InterPro:IPR018097 InterPro:IPR020894 Pfam:PF00008 Pfam:PF00028
Pfam:PF07645 PRINTS:PR00205 PROSITE:PS00232 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS50268 SMART:SM00112 SMART:SM00179
SMART:SM00181 InterPro:IPR000152 MGI:MGI:3045256 GO:GO:0016021
GO:GO:0005886 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 eggNOG:NOG12793 InterPro:IPR001791
SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025 GO:GO:0007156
SUPFAM:SSF49313 Gene3D:2.60.40.60 GeneTree:ENSGT00700000104207
Pfam:PF02210 HSSP:P15116 CTD:79633 HOGENOM:HOG000074162
HOVERGEN:HBG104800 KO:K16669 OMA:GKMCESS OrthoDB:EOG4HDSSK
EMBL:DQ286572 EMBL:AC122841 EMBL:AC161228 EMBL:AK031348
EMBL:AK034552 EMBL:BC079887 IPI:IPI00228716 IPI:IPI00889310
RefSeq:NP_899044.3 UniGene:Mm.316210 ProteinModelPortal:Q2PZL6
SMR:Q2PZL6 IntAct:Q2PZL6 STRING:Q2PZL6 PhosphoSite:Q2PZL6
PaxDb:Q2PZL6 PRIDE:Q2PZL6 Ensembl:ENSMUST00000061260 GeneID:329628
KEGG:mmu:329628 UCSC:uc008pbe.1 UCSC:uc008pbf.1 InParanoid:Q2PZL6
NextBio:398867 Bgee:Q2PZL6 CleanEx:MM_FAT4 Genevestigator:Q2PZL6
Uniprot:Q2PZL6
Length = 4981
Score = 241 (89.9 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 97/401 (24%), Positives = 163/401 (40%)
Query: 37 GRSKECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQFNGSSYLR 96
G+ E + C PC +GG C + S YC CP G G C+ L F SY+
Sbjct: 3934 GKMCESSVNYCECNPCFNGGSCQSGVESYYCHCPFGVFGKHCE----LNSYGFEELSYME 3989
Query: 97 YQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGV-GDFIALYLNDRYVDFTFDLGTG 155
+ L + + F I+ + +LLYN G +F+AL + + + F+++LG+G
Sbjct: 3990 FPSLDPNNNYIY---VKFATIKSHALLLYNYDNQTGERAEFLALEIAEERLRFSYNLGSG 4046
Query: 156 AATLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPG-----------PFTQXX 204
L + +S G++H + R G A L VD +Q PG +T
Sbjct: 4047 TYKLTTMKKVSDGQFHTVIARRAGMAASLTVDSCSENQ--EPGYCTVSNVAVSDDWTLDV 4104
Query: 205 XXXXXXXGGVPDYN-IVSPKVKIKS-SFIGCIQKVLINNHELN-ILGEAIQGVNVVNCAH 261
GG+ I+ + ++S F+GC+ + +N L A QG+ + C
Sbjct: 4105 QPNRVTVGGIRSLEPILQRRGHVESHDFVGCVMEFAVNGRPLEPSQALAAQGI-LDQCPR 4163
Query: 262 ---PCITQPCG-SGSCVPLYDGYKCVCTQS-----CKESHLTEVMCASFDHGASFLHYLD 312
C PC G+CV + +C C + C++S +T S + G L Y
Sbjct: 4164 LEGTCARNPCQHGGTCVDFWSWQQCQCMEGLTGKYCEKS-VTPDTALSLE-GKGRLDY-- 4219
Query: 313 PEIIHSSGLLHYKFQLHVDFRITGYE-FNI---DMRIKTSSSSGLILWTGSSQSKDFLAL 368
H S ++ L R T E F + +++ +T S +G+++ +S ++ +
Sbjct: 4220 ----HMSQSEKREYLLTQSIRDTTLEPFGVNSLEVKFRTRSENGILIHI--QESSNYTTV 4273
Query: 369 GIHNGYAHVMYXXXXXXXXXXXX-QTKINNGVWHRLTVHRN 408
I NG H + I +G WH + +N
Sbjct: 4274 KIKNGKVHFTSDAGVAGKVERIIPEAYIADGHWHTFRISKN 4314
Score = 170 (64.9 bits), Expect = 5.1e-10, Sum P(3) = 5.1e-10
Identities = 64/268 (23%), Positives = 100/268 (37%)
Query: 36 KGRSKEC--LEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVP-QFNGS 92
+G +C LE C + PC+HGG C+ C C G TG C+ + G
Sbjct: 4155 QGILDQCPRLEGTCARNPCQHGGTCVDFWSWQQCQCMEGLTGKYCEKSVTPDTALSLEGK 4214
Query: 93 SYLRYQ-GLGEQYLSLLDLTIVFKAIEPNGI----LLYNGHRADGV-------GDFIALY 140
L Y E+ LL +I +EP G+ + + +G+ ++ +
Sbjct: 4215 GRLDYHMSQSEKREYLLTQSIRDTTLEPFGVNSLEVKFRTRSENGILIHIQESSNYTTVK 4274
Query: 141 LNDRYVDFTFDLGTGAATLR--SSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPG 198
+ + V FT D G R I+ G WH R+++ G L VDR + I+ P
Sbjct: 4275 IKNGKVHFTSDAGVAGKVERIIPEAYIADGHWHTFRISKNGSITVLSVDRIHNRDIVHPT 4334
Query: 199 PFTQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVN 258
GG+P N + + F GCI VL L G+ + ++
Sbjct: 4335 QDFGGIEVLSMSLGGIPP-NQAHRDTQ--TGFNGCIASVLYGGESLPFSGK--HSLASIS 4389
Query: 259 CAHPCITQPC-GSGSCV--PLYDGYKCV 283
P + C G C P + C+
Sbjct: 4390 KTDPSVKIGCRGPNICASNPCWGDLLCI 4417
Score = 154 (59.3 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 59/227 (25%), Positives = 90/227 (39%)
Query: 81 RLDLQVPQFNGSSYLRYQGLGEQYLS---LLDLTIVFKAIEPNGILLYNGHRADGVGDFI 137
RLD + Q YL Q + + L + L + F+ NGIL+ H + ++
Sbjct: 4216 RLDYHMSQSEKREYLLTQSIRDTTLEPFGVNSLEVKFRTRSENGILI---HIQES-SNYT 4271
Query: 138 ALYLNDRYVDFTFDLGTGAATLR--SSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQIL 195
+ + + V FT D G R I+ G WH R+++ G L VDR + I+
Sbjct: 4272 TVKIKNGKVHFTSDAGVAGKVERIIPEAYIADGHWHTFRISKNGSITVLSVDRIHNRDIV 4331
Query: 196 SPGPFTQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGE-AIQGV 254
P GG+P N + + F GCI VL L G+ ++ +
Sbjct: 4332 HPTQDFGGIEVLSMSLGGIPP-NQAHRDTQ--TGFNGCIASVLYGGESLPFSGKHSLASI 4388
Query: 255 NV------VNCAHP--CITQPC-GSGSCVPLYDGYKCVCTQSCKESH 292
+ + C P C + PC G C+ + YKCV C SH
Sbjct: 4389 SKTDPSVKIGCRGPNICASNPCWGDLLCINQWYAYKCVPPGDCA-SH 4434
Score = 114 (45.2 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 22/59 (37%), Positives = 34/59 (57%)
Query: 37 GRSKECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQV--PQFNGSS 93
GR+ E ++C +PC+HG C PG C+C G+TG +C++ ++ P FNG S
Sbjct: 3896 GRACERDINECLPSPCKHGAVCQNFPGGFNCVCKTGYTGKMCESSVNYCECNPCFNGGS 3954
Score = 98 (39.6 bits), Expect = 5.6e-11, Sum P(2) = 5.6e-11
Identities = 17/43 (39%), Positives = 23/43 (53%)
Query: 45 DKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVP 87
D+C PC +GG C G C CP GFTG C+ ++ +P
Sbjct: 3866 DECLPAPCHNGGTCHNLVGGFSCSCPEGFTGRACERDINECLP 3908
Score = 72 (30.4 bits), Expect = 5.1e-10, Sum P(3) = 5.1e-10
Identities = 18/38 (47%), Positives = 19/38 (50%)
Query: 259 CAHP--CITQPC-GSGSCVP-LYDGYKCVCTQSCKESH 292
C P C + PC GSC P L GY C SC ESH
Sbjct: 4425 CVPPGDCASHPCQNGGSCEPGLLSGYTC----SCPESH 4458
Score = 52 (23.4 bits), Expect = 2.6e-06, Sum P(3) = 2.6e-06
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 65 SYCLCPLGFTGDLCQTRLD--LQVPQFNGSS 93
S C C G+ G C+ +D L P NG +
Sbjct: 3848 SQCKCVPGYAGSWCEVDIDECLPAPCHNGGT 3878
Score = 50 (22.7 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 45 DKCNKTPCEHGGKCI 59
D C PC++GG C+
Sbjct: 3806 DPCIHGPCQNGGSCL 3820
>RGD|1564291 [details] [associations]
symbol:Fat4 "FAT tumor suppressor homolog 4 (Drosophila)"
species:10116 "Rattus norvegicus" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007156 "homophilic cell adhesion" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR002126 InterPro:IPR015919
InterPro:IPR018097 InterPro:IPR020894 Pfam:PF00008 Pfam:PF00028
Pfam:PF07645 PRINTS:PR00205 PROSITE:PS00232 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS50268 SMART:SM00112 SMART:SM00179
SMART:SM00181 InterPro:IPR000152 RGD:1564291 GO:GO:0016021
GO:GO:0005886 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 GO:GO:0007156 SUPFAM:SSF49313
Gene3D:2.60.40.60 GeneTree:ENSGT00700000104207 Pfam:PF02210
CTD:79633 KO:K16669 OMA:GKMCESS OrthoDB:EOG4HDSSK IPI:IPI00561034
RefSeq:XP_001070073.3 UniGene:Rn.30629 ProteinModelPortal:D3ZEH1
PhosphoSite:D3ZEH1 PRIDE:D3ZEH1 Ensembl:ENSRNOT00000038703
GeneID:310341 KEGG:rno:310341 UCSC:RGD:1564291 Uniprot:D3ZEH1
Length = 4981
Score = 239 (89.2 bits), Expect = 1.9e-15, Sum P(2) = 1.9e-15
Identities = 94/397 (23%), Positives = 160/397 (40%)
Query: 37 GRSKECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQFNGSSYLR 96
G+ E + C PC +GG C + S YC CP G G C+ L F SY+
Sbjct: 3934 GKMCESSVNYCECNPCFNGGSCQSGVESYYCHCPFGVFGKHCE----LNSYGFEELSYME 3989
Query: 97 YQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGV-GDFIALYLNDRYVDFTFDLGTG 155
+ L + + F I+ + +LLYN G +F+AL + + + F+++LG+G
Sbjct: 3990 FPSLDPNNNYIY---VKFATIKSHALLLYNYDNQTGERAEFLALEIAEERLRFSYNLGSG 4046
Query: 156 AATLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPG-----------PFTQXX 204
L + +S G++H + R G A L VD +Q PG +T
Sbjct: 4047 TYKLTTMKKVSDGQFHTVIARRAGMAASLTVDSCSENQ--EPGYCTVSNVAVSDDWTLDV 4104
Query: 205 XXXXXXXGGVPDYN-IVSPKVKIKS-SFIGCIQKVLINNHELN-ILGEAIQGVNVVNCAH 261
GG+ I+ K ++S F+GCI + +N L A QG+ + C
Sbjct: 4105 QPNRVTVGGIRSLEPILQRKGHVESHDFVGCIMEFAVNGRPLEPSQALAAQGI-LDQCPR 4163
Query: 262 ---PCITQPCG-SGSCVPLYDGYKCVCTQS-----CKESHLTEVMCASFDHGASFLHYLD 312
C PC G+CV + +C C + C++S +T S + G L Y
Sbjct: 4164 LEGTCARNPCQHGGTCVDFWSWQQCQCMEGLTGKYCEKS-VTPDTALSLE-GKGRLDYHM 4221
Query: 313 PEIIHSSGLLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHN 372
+ LL + G +++++ +T S +G+++ +S ++ + I N
Sbjct: 4222 SQSEKREYLLTQSIR-EATLEPFGVN-SLEVKFRTRSENGILIHI--QESSNYTTVKIKN 4277
Query: 373 GYAHVMYXXXXXXXXXXXX-QTKINNGVWHRLTVHRN 408
G H + + +G WH + +N
Sbjct: 4278 GKVHFTSDAGVAGKVERIIPEAYVADGHWHTFRISKN 4314
Score = 171 (65.3 bits), Expect = 2.5e-10, Sum P(3) = 2.5e-10
Identities = 63/268 (23%), Positives = 100/268 (37%)
Query: 36 KGRSKEC--LEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVP-QFNGS 92
+G +C LE C + PC+HGG C+ C C G TG C+ + G
Sbjct: 4155 QGILDQCPRLEGTCARNPCQHGGTCVDFWSWQQCQCMEGLTGKYCEKSVTPDTALSLEGK 4214
Query: 93 SYLRYQ-GLGEQYLSLLDLTIVFKAIEPNGI----LLYNGHRADGV-------GDFIALY 140
L Y E+ LL +I +EP G+ + + +G+ ++ +
Sbjct: 4215 GRLDYHMSQSEKREYLLTQSIREATLEPFGVNSLEVKFRTRSENGILIHIQESSNYTTVK 4274
Query: 141 LNDRYVDFTFDLGTGAATLR--SSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPG 198
+ + V FT D G R ++ G WH R+++ G L VDR S ++ P
Sbjct: 4275 IKNGKVHFTSDAGVAGKVERIIPEAYVADGHWHTFRISKNGSSTVLSVDRTHSRDVVHPT 4334
Query: 199 PFTQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVN 258
GG+P N + + F GCI VL L G+ + ++
Sbjct: 4335 QDFGGIEVLSMSLGGIPP-NQAHRDTQ--TGFNGCIASVLYGGESLPFSGK--HSLASIS 4389
Query: 259 CAHPCITQPC-GSGSCV--PLYDGYKCV 283
P + C G C P + C+
Sbjct: 4390 KTDPSVKIGCRGPNICASNPCWGDLLCI 4417
Score = 158 (60.7 bits), Expect = 4.6e-13, Sum P(2) = 4.6e-13
Identities = 59/227 (25%), Positives = 90/227 (39%)
Query: 81 RLDLQVPQFNGSSYLRYQGLGEQYLS---LLDLTIVFKAIEPNGILLYNGHRADGVGDFI 137
RLD + Q YL Q + E L + L + F+ NGIL+ H + ++
Sbjct: 4216 RLDYHMSQSEKREYLLTQSIREATLEPFGVNSLEVKFRTRSENGILI---HIQES-SNYT 4271
Query: 138 ALYLNDRYVDFTFDLGTGAATLR--SSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQIL 195
+ + + V FT D G R ++ G WH R+++ G L VDR S ++
Sbjct: 4272 TVKIKNGKVHFTSDAGVAGKVERIIPEAYVADGHWHTFRISKNGSSTVLSVDRTHSRDVV 4331
Query: 196 SPGPFTQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGE-AIQGV 254
P GG+P N + + F GCI VL L G+ ++ +
Sbjct: 4332 HPTQDFGGIEVLSMSLGGIPP-NQAHRDTQ--TGFNGCIASVLYGGESLPFSGKHSLASI 4388
Query: 255 NV------VNCAHP--CITQPC-GSGSCVPLYDGYKCVCTQSCKESH 292
+ + C P C + PC G C+ + YKCV C SH
Sbjct: 4389 SKTDPSVKIGCRGPNICASNPCWGDLLCINQWYAYKCVPPGDCA-SH 4434
Score = 114 (45.2 bits), Expect = 4.6e-13, Sum P(2) = 4.6e-13
Identities = 22/59 (37%), Positives = 34/59 (57%)
Query: 37 GRSKECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQV--PQFNGSS 93
GR+ E ++C +PC+HG C PG C+C G+TG +C++ ++ P FNG S
Sbjct: 3896 GRACERDINECLPSPCKHGAVCQNFPGGFNCVCKTGYTGKMCESSVNYCECNPCFNGGS 3954
Score = 90 (36.7 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 16/43 (37%), Positives = 22/43 (51%)
Query: 45 DKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVP 87
D+C PC +GG C G C C GFTG C+ ++ +P
Sbjct: 3866 DECLPAPCHNGGTCHNLVGGFSCSCSEGFTGRACERDINECLP 3908
Score = 72 (30.4 bits), Expect = 2.5e-10, Sum P(3) = 2.5e-10
Identities = 18/38 (47%), Positives = 19/38 (50%)
Query: 259 CAHP--CITQPC-GSGSCVP-LYDGYKCVCTQSCKESH 292
C P C + PC GSC P L GY C SC ESH
Sbjct: 4425 CVPPGDCASHPCQNGGSCEPGLLSGYTC----SCPESH 4458
Score = 52 (23.4 bits), Expect = 1.9e-15, Sum P(2) = 1.9e-15
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 45 DKCNKTPCEHGGKCI 59
D C PC++GG C+
Sbjct: 3806 DPCIHAPCQNGGSCL 3820
Score = 49 (22.3 bits), Expect = 1.2e-06, Sum P(3) = 1.2e-06
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 67 CLCPLGFTGDLCQTRLD--LQVPQFNGSS 93
C C G+ G C+ +D L P NG +
Sbjct: 3850 CKCVPGYAGSWCEVDIDECLPAPCHNGGT 3878
>UNIPROTKB|F1LS94 [details] [associations]
symbol:Nrxn2 "Neurexin-2-beta" species:10116 "Rattus
norvegicus" [GO:0007269 "neurotransmitter secretion" evidence=IEA]
[GO:0007416 "synapse assembly" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] InterPro:IPR000742 InterPro:IPR027160
PROSITE:PS50026 SMART:SM00181 RGD:620211 GO:GO:0016021
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025
Pfam:PF02210 InterPro:IPR003585 SMART:SM00294
GeneTree:ENSGT00560000076996 PANTHER:PTHR10127:SF307
IPI:IPI00208059 Ensembl:ENSRNOT00000028654 ArrayExpress:F1LS94
Uniprot:F1LS94
Length = 1715
Score = 192 (72.6 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 86/328 (26%), Positives = 143/328 (43%)
Query: 92 SSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFD 151
SSYL L + Y S+ L FK P+G+LL+N +G DFI + L Y+ + FD
Sbjct: 929 SSYLALATL-QAYASM-HLFFQFKTTAPDGLLLFNS--GNG-NDFIVIELVKGYIHYVFD 983
Query: 152 LGTGAATLR--SSNPISLGEWHKLRLTRTGRHAY-LQVDRFPSSQILSPGPFTQXXXXXX 208
LG G + ++ S P++ +WH + ++R + + L++D +Q S G
Sbjct: 984 LGNGPSLMKGNSDKPVNDNQWHNVVVSRDPGNVHTLKIDSRTVTQH-SNGA-RNLDLKGE 1041
Query: 209 XXXGGVPDYNIVS--PK-VKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVN--CAHP- 262
GG+ N+ S PK V + F GC+ V +N +++ +A+ + V C P
Sbjct: 1042 LYIGGLSK-NMFSNLPKLVASRDGFQGCLASVDLNGRLPDLIADALHRIGQVERGCDGPS 1100
Query: 263 --CITQPCGS-GSCVPLYDGYKCVCTQS------CKESHLTEVMCASFDHGASFLHYLDP 313
C + C + G C+ +DG+ C CT + C + T + F G + + Y P
Sbjct: 1101 TTCTEESCANQGVCLQQWDGFTCDCTMTSYGGPVCNDPGTTYI----FGKGGALITYTWP 1156
Query: 314 EIIHSSGLLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNG 373
S + +L V F T + +R+ S+SGL G D+L L I G
Sbjct: 1157 PNDRPSTRMD---RLAVGFS-THQRSAVLVRV--DSASGL----G-----DYLQLHIDQG 1201
Query: 374 YAHVMYXXXXXXXXXXXXQTKINNGVWH 401
V++ +++G +H
Sbjct: 1202 TVGVIFNVGTDDITIDEPNAIVSDGKYH 1229
Score = 185 (70.2 bits), Expect = 2.0e-15, Sum P(3) = 2.0e-15
Identities = 79/290 (27%), Positives = 132/290 (45%)
Query: 110 LTIVFKAIEPNGILLYN-GHRAD-GVG--------DFIALYLNDRYVDFTFDLGTGAATL 159
+++ F+ EPNG+LL++ G RA GVG D+ A+ L D Y+ D+G+G L
Sbjct: 517 ISLDFRTTEPNGLLLFSQGRRAGAGVGSHSSSQRADYFAMELLDGYLYLLLDMGSGGIKL 576
Query: 160 R-SSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYN 218
R SS ++ GEW + R GR + V+ S+ L+ G GG+P+
Sbjct: 577 RASSRKVNDGEWCHVDFQRDGRKGSISVNS-RSTPFLATGESEVLDLESELYLGGLPEGG 635
Query: 219 IVS----PKV---KIKSSFIGCIQKVLIN--NHELNILGEAIQGVNVVN-CAHP----CI 264
V P+V +++ ++GC++ + I+ + +L L EA V V C+ C
Sbjct: 636 RVDLPLPPEVWTAALRAGYVGCVRDLFIDGRSRDLRGLAEAQGAVGVAPFCSRETLKQCA 695
Query: 265 TQPCGSGS-CVPLYDGYKCVCTQSCKESHLTEVMCASFDHGASFLHYLDPEIIHSSGLLH 323
+ PC +G C ++ + C C + L V C + A+ L Y G ++
Sbjct: 696 SAPCRNGGICREGWNRFVCDCIGT---GFLGRV-C---EREATVLSY--------DGSMY 740
Query: 324 YKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNG 373
K L T E ++ +R + + GL++ T S +S D L L + G
Sbjct: 741 MKIMLPNAMH-TEAE-DVSLRFMSQRAYGLMMATTSRESADTLRLELDGG 788
Score = 146 (56.5 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 74/307 (24%), Positives = 127/307 (41%)
Query: 128 HRADGVGDFIALYLNDRYVDFTFDLGTGAATLR-SSNPISLGEWHKLRLTRTGRHAYLQV 186
H + D+ A+ L D Y+ D+G+G LR SS ++ GEW + R GR + V
Sbjct: 545 HSSSQRADYFAMELLDGYLYLLLDMGSGGIKLRASSRKVNDGEWCHVDFQRDGRKGSISV 604
Query: 187 DRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVS----PKV---KIKSSFIGCIQKVLI 239
+ S+ L+ G GG+P+ V P+V +++ ++GC++ + I
Sbjct: 605 NS-RSTPFLATGESEVLDLESELYLGGLPEGGRVDLPLPPEVWTAALRAGYVGCVRDLFI 663
Query: 240 N--NHELNILGEAIQGVNVVN-CAHP----CITQPCGSGS-CVPLYDGYKCVCTQSCKES 291
+ + +L L EA V V C+ C + PC +G C ++ + C C +
Sbjct: 664 DGRSRDLRGLAEAQGAVGVAPFCSRETLKQCASAPCRNGGICREGWNRFVCDCIGT---G 720
Query: 292 HLTEVMCASFDHGASFLHYLDPEIIHSSGLLHYKFQLHVDFRITGYEFNIDMRIKTSSSS 351
L V C + A+ L Y G ++ K L T E ++ +R + +
Sbjct: 721 FLGRV-C---EREATVLSY--------DGSMYMKIMLPNAMH-TEAE-DVSLRFMSQRAY 766
Query: 352 GLILWTGSSQSKDFLALGIHNGYAHV------MYXXXXXXXXXXXXQT-----KINNGVW 400
GL++ T S +S D L L + G + + +T K+N+ W
Sbjct: 767 GLMMATTSRESADTLRLELDGGQMKLTVNLDCLRVGCAPSAAGKGPETLFAGHKLNDNEW 826
Query: 401 HRLTVHR 407
H + V R
Sbjct: 827 HTVRVVR 833
Score = 139 (54.0 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 42/159 (26%), Positives = 77/159 (48%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCPL-GFTGDLCQTRLDLQVPQFN-GSSYLRYQGL-GEQ 103
C + C + G C+ C C + + G +C + F G + + Y ++
Sbjct: 1103 CTEESCANQGVCLQQWDGFTCDCTMTSYGGPVCNDPGTTYI--FGKGGALITYTWPPNDR 1160
Query: 104 YLSLLD-LTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSS 162
+ +D L + F + + +L+ A G+GD++ L+++ V F++GT T+
Sbjct: 1161 PSTRMDRLAVGFSTHQRSAVLV-RVDSASGLGDYLQLHIDQGTVGVIFNVGTDDITIDEP 1219
Query: 163 NPI-SLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPF 200
N I S G++H +R TR+G +A LQVD +P ++ G F
Sbjct: 1220 NAIVSDGKYHVVRFTRSGGNATLQVDSWPVNERYPAGNF 1258
Score = 127 (49.8 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 50/215 (23%), Positives = 91/215 (42%)
Query: 39 SKECLEDKCNKTPCEHGGKCITTPGSSYCLC-PLGFTGDLCQTRLDLQVPQFNGSSYLRY 97
S+E L+ +C PC +GG C C C GF G +C+ + V ++GS Y++
Sbjct: 687 SRETLK-QCASAPCRNGGICREGWNRFVCDCIGTGFLGRVCER--EATVLSYDGSMYMKI 743
Query: 98 QGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDL----- 152
+ D+++ F + G+++ R D + L L+ + T +L
Sbjct: 744 MLPNAMHTEAEDVSLRFMSQRAYGLMMATTSRESA--DTLRLELDGGQMKLTVNLDCLRV 801
Query: 153 -------GTGAATLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXX 205
G G TL + + ++ EWH +R+ R G+ L VD ++ G T+
Sbjct: 802 GCAPSAAGKGPETLFAGHKLNDNEWHTVRVVRRGKSLQLSVDNVTVEGQMA-GAHTRLEF 860
Query: 206 XXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLIN 240
G + + +S + S+FIG + ++ N
Sbjct: 861 HNIET-GIMTERRFISV---VPSNFIGHLSGLVFN 891
Score = 115 (45.5 bits), Expect = 6.9e-08, Sum P(3) = 6.9e-08
Identities = 49/196 (25%), Positives = 85/196 (43%)
Query: 72 GFTGDLCQTRLDLQ--VPQFNGSSYLRYQGLGEQYLSLLD-LTIVFKAIEPNGILLYNGH 128
G GD+ Q + V F G+ + Y S D +T+ F+ ++ NG++L+ G
Sbjct: 273 GGAGDVHQPTKGKEEFVATFKGNEFFCYDLSHNPIQSSTDEITLAFRTLQRNGLMLHTGK 332
Query: 129 RADGVGDFIALYLNDRYVDFTFDLGTGA--ATLRSSN-PISLGEWHKLRLTRTGR----- 180
AD ++ L L V +LG+GA A + N + WH +R+TR R
Sbjct: 333 SAD----YVNLSLKSGAVWLVINLGSGAFEALVEPVNGKFNDNAWHDVRVTRNLRQHAGI 388
Query: 181 -HA------YL---QVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSPKVKIKSSF 230
HA YL VD ++ + +T GG P+ + P + ++F
Sbjct: 389 GHAMVNKLHYLVTISVDGILTTTGYTQEDYTMLGSDDFFYIGGSPNTADL-PGSPVSNNF 447
Query: 231 IGCIQKVLINNHELNI 246
+GC++ V+ N++ +
Sbjct: 448 MGCLKDVVYKNNDFKL 463
Score = 109 (43.4 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 51/203 (25%), Positives = 80/203 (39%)
Query: 94 YLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLG 153
Y R+ G S +L+ + +LLY D DF+ L L D + F L
Sbjct: 41 YARWAGAA----STGELSFSLRTNATRALLLYLDDGGDC--DFLELLLVDGRLRLRFTLS 94
Query: 154 TGA-ATLRSSNPISLGEWHKLRLTRTGRHAYLQVD-RFPSSQILSPGPFTQXXXXXXXXX 211
ATL+ P++ WH + LTR R L VD ++++ S Q
Sbjct: 95 CAEPATLQLDTPVADDRWHMVLLTRDARRTALAVDGEARAAEVRSKRREMQVASDLFV-- 152
Query: 212 GGVP-DYNIVS---PKVKIKSSFIGCIQKVLINNHELNILG-EAIQGVNVVNCAHPCITQ 266
GG+P D + + VK + F G + + + +LG + ++G P
Sbjct: 153 GGIPPDVRLSALTLSTVKYEPPFRGLLANLKLGERPPALLGSQGLRGAAADPLCAPA-RN 211
Query: 267 PCGSGS-CVPLYDG-YKCVCTQS 287
PC +G C L G C C+ +
Sbjct: 212 PCANGGLCTVLAPGEVGCDCSHT 234
Score = 80 (33.2 bits), Expect = 2.0e-15, Sum P(3) = 2.0e-15
Identities = 17/66 (25%), Positives = 31/66 (46%)
Query: 344 RIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTK-INNGVWHR 402
+ KT++ GL+L+ S DF+ + + GY H ++ K +N+ WH
Sbjct: 948 QFKTTAPDGLLLFN-SGNGNDFIVIELVKGYIHYVFDLGNGPSLMKGNSDKPVNDNQWHN 1006
Query: 403 LTVHRN 408
+ V R+
Sbjct: 1007 VVVSRD 1012
Score = 71 (30.1 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 23/86 (26%), Positives = 36/86 (41%)
Query: 341 IDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQT--KINNG 398
I + +T +GL+L TG +S D++ L + +G ++ K N+
Sbjct: 314 ITLAFRTLQRNGLMLHTG--KSADYVNLSLKSGAVWLVINLGSGAFEALVEPVNGKFNDN 371
Query: 399 VWHRLTVHRNFMVVMH-GSSHTRSNK 423
WH + V RN H G H NK
Sbjct: 372 AWHDVRVTRNLR--QHAGIGHAMVNK 395
Score = 67 (28.6 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 15/51 (29%), Positives = 27/51 (52%)
Query: 462 FEQLNTDSGLYVGGVEDIEELTRSKYHHSFKGWISNLILSNDYQVKLPLSR 512
+ L +D Y+GG + +L S ++F G + +++ N+ KL LSR
Sbjct: 418 YTMLGSDDFFYIGGSPNTADLPGSPVSNNFMGCLKDVVYKNN-DFKLELSR 467
Score = 65 (27.9 bits), Expect = 2.0e-15, Sum P(3) = 2.0e-15
Identities = 13/32 (40%), Positives = 16/32 (50%)
Query: 49 KTPCEHGGKC-ITTPGSSYCLCP-LGFTGDLC 78
+ PC +GG C + PG C C GF G C
Sbjct: 210 RNPCANGGLCTVLAPGEVGCDCSHTGFGGKFC 241
Score = 63 (27.2 bits), Expect = 8.4e-07, Sum P(4) = 8.4e-07
Identities = 19/82 (23%), Positives = 36/82 (43%)
Query: 328 LHVDFRITGYEFNIDMRIKTSSSSGLILWT-GSSQSKDFLALGIHNGYAHVMYXXXXXXX 386
+ +DFR T E N + +G + + SSQ D+ A+ + +GY +++
Sbjct: 517 ISLDFRTT--EPNGLLLFSQGRRAGAGVGSHSSSQRADYFAMELLDGYLYLLLDMGSGGI 574
Query: 387 XXXXXQTKINNGVWHRLTVHRN 408
K+N+G W + R+
Sbjct: 575 KLRASSRKVNDGEWCHVDFQRD 596
Score = 48 (22.0 bits), Expect = 8.4e-07, Sum P(4) = 8.4e-07
Identities = 12/40 (30%), Positives = 25/40 (62%)
Query: 439 RTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVED 478
R G++ I +++ S ++ G+ E L+ +S LY+GG+ +
Sbjct: 595 RDGRKGSISVNSR-STPFLATGESEVLDLESELYLGGLPE 633
Score = 38 (18.4 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 11/29 (37%), Positives = 20/29 (68%)
Query: 11 DDWNTVRVFRHRWDAWIQLN-DGNKIKGR 38
++W+TVRV R R + +QL+ D ++G+
Sbjct: 824 NEWHTVRVVR-RGKS-LQLSVDNVTVEGQ 850
>UNIPROTKB|Q63374 [details] [associations]
symbol:Nrxn2 "Neurexin-2" species:10116 "Rattus norvegicus"
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0007269
"neurotransmitter secretion" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0050839 "cell adhesion molecule binding"
evidence=ISS] [GO:0097104 "postsynaptic membrane assembly"
evidence=ISS] [GO:0097116 "gephyrin clustering" evidence=ISS]
[GO:0097118 "neuroligin clustering" evidence=ISS] [GO:0097119
"postsynaptic density protein 95 clustering" evidence=ISS]
InterPro:IPR000742 InterPro:IPR027160 PROSITE:PS50026 SMART:SM00181
RGD:620211 GO:GO:0016021 GO:GO:0046872 GO:GO:0007155
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186 GO:GO:0050839
InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025 Pfam:PF02210
InterPro:IPR003585 SMART:SM00294 GO:GO:0097119 GO:GO:0097104
GO:GO:0097116 eggNOG:NOG302266 HOGENOM:HOG000230481
HOVERGEN:HBG052670 KO:K07377 OrthoDB:EOG41G339 GO:GO:0097118
CTD:9379 PANTHER:PTHR10127:SF307 EMBL:M96376 EMBL:AABR03000676
EMBL:AABR03002856 EMBL:AABR03004066 EMBL:AABR03004601
EMBL:AABR03004809 EMBL:AABR03005995 EMBL:AABR03006603
EMBL:AABR03006786 EMBL:AABR03008290 EMBL:AABR03009435
IPI:IPI00208059 IPI:IPI00780694 IPI:IPI00829431 IPI:IPI00829433
IPI:IPI00829458 IPI:IPI00829464 IPI:IPI00829468 IPI:IPI00829489
IPI:IPI00829496 IPI:IPI00829502 PIR:C40228 RefSeq:NP_446298.1
UniGene:Rn.11282 ProteinModelPortal:Q63374 SMR:Q63374 STRING:Q63374
PhosphoSite:Q63374 PRIDE:Q63374 GeneID:116595 KEGG:rno:116595
InParanoid:Q63374 NextBio:619287 ArrayExpress:Q63374
Genevestigator:Q63374 GermOnline:ENSRNOG00000021103 Uniprot:Q63374
Length = 1715
Score = 192 (72.6 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 86/328 (26%), Positives = 143/328 (43%)
Query: 92 SSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFD 151
SSYL L + Y S+ L FK P+G+LL+N +G DFI + L Y+ + FD
Sbjct: 929 SSYLALATL-QAYASM-HLFFQFKTTAPDGLLLFNS--GNG-NDFIVIELVKGYIHYVFD 983
Query: 152 LGTGAATLR--SSNPISLGEWHKLRLTRTGRHAY-LQVDRFPSSQILSPGPFTQXXXXXX 208
LG G + ++ S P++ +WH + ++R + + L++D +Q S G
Sbjct: 984 LGNGPSLMKGNSDKPVNDNQWHNVVVSRDPGNVHTLKIDSRTVTQH-SNGA-RNLDLKGE 1041
Query: 209 XXXGGVPDYNIVS--PK-VKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVN--CAHP- 262
GG+ N+ S PK V + F GC+ V +N +++ +A+ + V C P
Sbjct: 1042 LYIGGLSK-NMFSNLPKLVASRDGFQGCLASVDLNGRLPDLIADALHRIGQVERGCDGPS 1100
Query: 263 --CITQPCGS-GSCVPLYDGYKCVCTQS------CKESHLTEVMCASFDHGASFLHYLDP 313
C + C + G C+ +DG+ C CT + C + T + F G + + Y P
Sbjct: 1101 TTCTEESCANQGVCLQQWDGFTCDCTMTSYGGPVCNDPGTTYI----FGKGGALITYTWP 1156
Query: 314 EIIHSSGLLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNG 373
S + +L V F T + +R+ S+SGL G D+L L I G
Sbjct: 1157 PNDRPSTRMD---RLAVGFS-THQRSAVLVRV--DSASGL----G-----DYLQLHIDQG 1201
Query: 374 YAHVMYXXXXXXXXXXXXQTKINNGVWH 401
V++ +++G +H
Sbjct: 1202 TVGVIFNVGTDDITIDEPNAIVSDGKYH 1229
Score = 185 (70.2 bits), Expect = 2.0e-15, Sum P(3) = 2.0e-15
Identities = 79/290 (27%), Positives = 132/290 (45%)
Query: 110 LTIVFKAIEPNGILLYN-GHRAD-GVG--------DFIALYLNDRYVDFTFDLGTGAATL 159
+++ F+ EPNG+LL++ G RA GVG D+ A+ L D Y+ D+G+G L
Sbjct: 517 ISLDFRTTEPNGLLLFSQGRRAGAGVGSHSSSQRADYFAMELLDGYLYLLLDMGSGGIKL 576
Query: 160 R-SSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYN 218
R SS ++ GEW + R GR + V+ S+ L+ G GG+P+
Sbjct: 577 RASSRKVNDGEWCHVDFQRDGRKGSISVNS-RSTPFLATGESEVLDLESELYLGGLPEGG 635
Query: 219 IVS----PKV---KIKSSFIGCIQKVLIN--NHELNILGEAIQGVNVVN-CAHP----CI 264
V P+V +++ ++GC++ + I+ + +L L EA V V C+ C
Sbjct: 636 RVDLPLPPEVWTAALRAGYVGCVRDLFIDGRSRDLRGLAEAQGAVGVAPFCSRETLKQCA 695
Query: 265 TQPCGSGS-CVPLYDGYKCVCTQSCKESHLTEVMCASFDHGASFLHYLDPEIIHSSGLLH 323
+ PC +G C ++ + C C + L V C + A+ L Y G ++
Sbjct: 696 SAPCRNGGICREGWNRFVCDCIGT---GFLGRV-C---EREATVLSY--------DGSMY 740
Query: 324 YKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNG 373
K L T E ++ +R + + GL++ T S +S D L L + G
Sbjct: 741 MKIMLPNAMH-TEAE-DVSLRFMSQRAYGLMMATTSRESADTLRLELDGG 788
Score = 146 (56.5 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 74/307 (24%), Positives = 127/307 (41%)
Query: 128 HRADGVGDFIALYLNDRYVDFTFDLGTGAATLR-SSNPISLGEWHKLRLTRTGRHAYLQV 186
H + D+ A+ L D Y+ D+G+G LR SS ++ GEW + R GR + V
Sbjct: 545 HSSSQRADYFAMELLDGYLYLLLDMGSGGIKLRASSRKVNDGEWCHVDFQRDGRKGSISV 604
Query: 187 DRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVS----PKV---KIKSSFIGCIQKVLI 239
+ S+ L+ G GG+P+ V P+V +++ ++GC++ + I
Sbjct: 605 NS-RSTPFLATGESEVLDLESELYLGGLPEGGRVDLPLPPEVWTAALRAGYVGCVRDLFI 663
Query: 240 N--NHELNILGEAIQGVNVVN-CAHP----CITQPCGSGS-CVPLYDGYKCVCTQSCKES 291
+ + +L L EA V V C+ C + PC +G C ++ + C C +
Sbjct: 664 DGRSRDLRGLAEAQGAVGVAPFCSRETLKQCASAPCRNGGICREGWNRFVCDCIGT---G 720
Query: 292 HLTEVMCASFDHGASFLHYLDPEIIHSSGLLHYKFQLHVDFRITGYEFNIDMRIKTSSSS 351
L V C + A+ L Y G ++ K L T E ++ +R + +
Sbjct: 721 FLGRV-C---EREATVLSY--------DGSMYMKIMLPNAMH-TEAE-DVSLRFMSQRAY 766
Query: 352 GLILWTGSSQSKDFLALGIHNGYAHV------MYXXXXXXXXXXXXQT-----KINNGVW 400
GL++ T S +S D L L + G + + +T K+N+ W
Sbjct: 767 GLMMATTSRESADTLRLELDGGQMKLTVNLDCLRVGCAPSAAGKGPETLFAGHKLNDNEW 826
Query: 401 HRLTVHR 407
H + V R
Sbjct: 827 HTVRVVR 833
Score = 139 (54.0 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 42/159 (26%), Positives = 77/159 (48%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCPL-GFTGDLCQTRLDLQVPQFN-GSSYLRYQGL-GEQ 103
C + C + G C+ C C + + G +C + F G + + Y ++
Sbjct: 1103 CTEESCANQGVCLQQWDGFTCDCTMTSYGGPVCNDPGTTYI--FGKGGALITYTWPPNDR 1160
Query: 104 YLSLLD-LTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSS 162
+ +D L + F + + +L+ A G+GD++ L+++ V F++GT T+
Sbjct: 1161 PSTRMDRLAVGFSTHQRSAVLV-RVDSASGLGDYLQLHIDQGTVGVIFNVGTDDITIDEP 1219
Query: 163 NPI-SLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPF 200
N I S G++H +R TR+G +A LQVD +P ++ G F
Sbjct: 1220 NAIVSDGKYHVVRFTRSGGNATLQVDSWPVNERYPAGNF 1258
Score = 127 (49.8 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 50/215 (23%), Positives = 91/215 (42%)
Query: 39 SKECLEDKCNKTPCEHGGKCITTPGSSYCLC-PLGFTGDLCQTRLDLQVPQFNGSSYLRY 97
S+E L+ +C PC +GG C C C GF G +C+ + V ++GS Y++
Sbjct: 687 SRETLK-QCASAPCRNGGICREGWNRFVCDCIGTGFLGRVCER--EATVLSYDGSMYMKI 743
Query: 98 QGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDL----- 152
+ D+++ F + G+++ R D + L L+ + T +L
Sbjct: 744 MLPNAMHTEAEDVSLRFMSQRAYGLMMATTSRESA--DTLRLELDGGQMKLTVNLDCLRV 801
Query: 153 -------GTGAATLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXX 205
G G TL + + ++ EWH +R+ R G+ L VD ++ G T+
Sbjct: 802 GCAPSAAGKGPETLFAGHKLNDNEWHTVRVVRRGKSLQLSVDNVTVEGQMA-GAHTRLEF 860
Query: 206 XXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLIN 240
G + + +S + S+FIG + ++ N
Sbjct: 861 HNIET-GIMTERRFISV---VPSNFIGHLSGLVFN 891
Score = 115 (45.5 bits), Expect = 6.9e-08, Sum P(3) = 6.9e-08
Identities = 49/196 (25%), Positives = 85/196 (43%)
Query: 72 GFTGDLCQTRLDLQ--VPQFNGSSYLRYQGLGEQYLSLLD-LTIVFKAIEPNGILLYNGH 128
G GD+ Q + V F G+ + Y S D +T+ F+ ++ NG++L+ G
Sbjct: 273 GGAGDVHQPTKGKEEFVATFKGNEFFCYDLSHNPIQSSTDEITLAFRTLQRNGLMLHTGK 332
Query: 129 RADGVGDFIALYLNDRYVDFTFDLGTGA--ATLRSSN-PISLGEWHKLRLTRTGR----- 180
AD ++ L L V +LG+GA A + N + WH +R+TR R
Sbjct: 333 SAD----YVNLSLKSGAVWLVINLGSGAFEALVEPVNGKFNDNAWHDVRVTRNLRQHAGI 388
Query: 181 -HA------YL---QVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSPKVKIKSSF 230
HA YL VD ++ + +T GG P+ + P + ++F
Sbjct: 389 GHAMVNKLHYLVTISVDGILTTTGYTQEDYTMLGSDDFFYIGGSPNTADL-PGSPVSNNF 447
Query: 231 IGCIQKVLINNHELNI 246
+GC++ V+ N++ +
Sbjct: 448 MGCLKDVVYKNNDFKL 463
Score = 109 (43.4 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 51/203 (25%), Positives = 80/203 (39%)
Query: 94 YLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLG 153
Y R+ G S +L+ + +LLY D DF+ L L D + F L
Sbjct: 41 YARWAGAA----STGELSFSLRTNATRALLLYLDDGGDC--DFLELLLVDGRLRLRFTLS 94
Query: 154 TGA-ATLRSSNPISLGEWHKLRLTRTGRHAYLQVD-RFPSSQILSPGPFTQXXXXXXXXX 211
ATL+ P++ WH + LTR R L VD ++++ S Q
Sbjct: 95 CAEPATLQLDTPVADDRWHMVLLTRDARRTALAVDGEARAAEVRSKRREMQVASDLFV-- 152
Query: 212 GGVP-DYNIVS---PKVKIKSSFIGCIQKVLINNHELNILG-EAIQGVNVVNCAHPCITQ 266
GG+P D + + VK + F G + + + +LG + ++G P
Sbjct: 153 GGIPPDVRLSALTLSTVKYEPPFRGLLANLKLGERPPALLGSQGLRGAAADPLCAPA-RN 211
Query: 267 PCGSGS-CVPLYDG-YKCVCTQS 287
PC +G C L G C C+ +
Sbjct: 212 PCANGGLCTVLAPGEVGCDCSHT 234
Score = 80 (33.2 bits), Expect = 2.0e-15, Sum P(3) = 2.0e-15
Identities = 17/66 (25%), Positives = 31/66 (46%)
Query: 344 RIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTK-INNGVWHR 402
+ KT++ GL+L+ S DF+ + + GY H ++ K +N+ WH
Sbjct: 948 QFKTTAPDGLLLFN-SGNGNDFIVIELVKGYIHYVFDLGNGPSLMKGNSDKPVNDNQWHN 1006
Query: 403 LTVHRN 408
+ V R+
Sbjct: 1007 VVVSRD 1012
Score = 71 (30.1 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 23/86 (26%), Positives = 36/86 (41%)
Query: 341 IDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQT--KINNG 398
I + +T +GL+L TG +S D++ L + +G ++ K N+
Sbjct: 314 ITLAFRTLQRNGLMLHTG--KSADYVNLSLKSGAVWLVINLGSGAFEALVEPVNGKFNDN 371
Query: 399 VWHRLTVHRNFMVVMH-GSSHTRSNK 423
WH + V RN H G H NK
Sbjct: 372 AWHDVRVTRNLR--QHAGIGHAMVNK 395
Score = 67 (28.6 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 15/51 (29%), Positives = 27/51 (52%)
Query: 462 FEQLNTDSGLYVGGVEDIEELTRSKYHHSFKGWISNLILSNDYQVKLPLSR 512
+ L +D Y+GG + +L S ++F G + +++ N+ KL LSR
Sbjct: 418 YTMLGSDDFFYIGGSPNTADLPGSPVSNNFMGCLKDVVYKNN-DFKLELSR 467
Score = 65 (27.9 bits), Expect = 2.0e-15, Sum P(3) = 2.0e-15
Identities = 13/32 (40%), Positives = 16/32 (50%)
Query: 49 KTPCEHGGKC-ITTPGSSYCLCP-LGFTGDLC 78
+ PC +GG C + PG C C GF G C
Sbjct: 210 RNPCANGGLCTVLAPGEVGCDCSHTGFGGKFC 241
Score = 63 (27.2 bits), Expect = 8.4e-07, Sum P(4) = 8.4e-07
Identities = 19/82 (23%), Positives = 36/82 (43%)
Query: 328 LHVDFRITGYEFNIDMRIKTSSSSGLILWT-GSSQSKDFLALGIHNGYAHVMYXXXXXXX 386
+ +DFR T E N + +G + + SSQ D+ A+ + +GY +++
Sbjct: 517 ISLDFRTT--EPNGLLLFSQGRRAGAGVGSHSSSQRADYFAMELLDGYLYLLLDMGSGGI 574
Query: 387 XXXXXQTKINNGVWHRLTVHRN 408
K+N+G W + R+
Sbjct: 575 KLRASSRKVNDGEWCHVDFQRD 596
Score = 48 (22.0 bits), Expect = 8.4e-07, Sum P(4) = 8.4e-07
Identities = 12/40 (30%), Positives = 25/40 (62%)
Query: 439 RTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVED 478
R G++ I +++ S ++ G+ E L+ +S LY+GG+ +
Sbjct: 595 RDGRKGSISVNSR-STPFLATGESEVLDLESELYLGGLPE 633
Score = 38 (18.4 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 11/29 (37%), Positives = 20/29 (68%)
Query: 11 DDWNTVRVFRHRWDAWIQLN-DGNKIKGR 38
++W+TVRV R R + +QL+ D ++G+
Sbjct: 824 NEWHTVRVVR-RGKS-LQLSVDNVTVEGQ 850
>WB|WBGene00006787 [details] [associations]
symbol:unc-52 species:6239 "Caenorhabditis elegans"
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IGI;IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0061199 "striated muscle contraction involved in
embryonic body morphogenesis" evidence=IMP] [GO:0018996 "molting
cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0016358 "dendrite development" evidence=IMP] [GO:0030163
"protein catabolic process" evidence=IMP] [GO:0007517 "muscle organ
development" evidence=IMP] [GO:0007173 "epidermal growth factor
receptor signaling pathway" evidence=IGI] [GO:0016477 "cell
migration" evidence=IGI] [GO:0048644 "muscle organ morphogenesis"
evidence=IGI] [GO:0005604 "basement membrane" evidence=IDA]
[GO:0005198 "structural molecule activity" evidence=ISS]
[GO:0031581 "hemidesmosome assembly" evidence=IGI] [GO:0040017
"positive regulation of locomotion" evidence=IMP]
InterPro:IPR000742 InterPro:IPR002172 InterPro:IPR007110
Pfam:PF00057 PROSITE:PS50026 PROSITE:PS50068 PROSITE:PS50835
SMART:SM00181 SMART:SM00192 EMBL:Z93375 GO:GO:0008340 GO:GO:0009792
GO:GO:0006898 GO:GO:0040010 GO:GO:0007173 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0016477 GO:GO:0002119 GO:GO:0048644
GO:GO:0005198 GO:GO:0018996 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003598 SMART:SM00408 GO:GO:0016358 GO:GO:0040017
GO:GO:0000003 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030239 GO:GO:0030163 PROSITE:PS01186
Gene3D:4.10.400.10 InterPro:IPR023415 SUPFAM:SSF57424
PROSITE:PS01209 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 GeneTree:ENSGT00530000063501 GO:GO:0005604
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR009030 SUPFAM:SSF57184
Pfam:PF02210 GO:GO:0031581 InterPro:IPR018031 InterPro:IPR000034
Pfam:PF00052 SMART:SM00281 PROSITE:PS51115 GO:GO:0061199
eggNOG:NOG258321 OMA:GVTQQCA EMBL:L13458 EMBL:Z93395 EMBL:AF132883
PIR:C88369 PIR:F88369 PIR:T19821 RefSeq:NP_001022488.1
RefSeq:NP_497044.3 RefSeq:NP_497045.1 RefSeq:NP_497046.1
RefSeq:NP_497047.1 ProteinModelPortal:Q06561 SMR:Q06561
IntAct:Q06561 STRING:Q06561 PaxDb:Q06561 PRIDE:Q06561
EnsemblMetazoa:ZC101.2e GeneID:175126 KEGG:cel:CELE_ZC101.2
UCSC:ZC101.2e CTD:175126 WormBase:ZC101.2a WormBase:ZC101.2b
WormBase:ZC101.2c WormBase:ZC101.2e WormBase:ZC101.2f
InParanoid:Q06561 NextBio:886870 ArrayExpress:Q06561 Uniprot:Q06561
Length = 3375
Score = 234 (87.4 bits), Expect = 2.3e-15, Sum P(2) = 2.3e-15
Identities = 60/220 (27%), Positives = 106/220 (48%)
Query: 47 CNKTPCEHGGKCITTPGSSY-CLCPLGFTGDLCQTRLDLQ-VPQFNGSSYLRYQGLGEQY 104
C + C G+C+ + Y C C L + G C ++ +F+G +++ +
Sbjct: 3141 CANSTCGMNGQCVPRNMTHYTCECKLYYDGPTCSLFKPIEHAARFDGDAFIELSSDEFPH 3200
Query: 105 LSLLDLTIV---FKAIEPNGILLYNGHR--ADGVGDFIALYLNDRYVDFTFDLGTGAATL 159
L+ IV FK + NG+LL+ G R + D+I++ + + ++ F+++LG GAA L
Sbjct: 3201 LTSEKDEIVAFKFKTEQQNGVLLWQGQRPTVQQMEDYISVGIVNGHLHFSYELGGGAAHL 3260
Query: 160 RSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNI 219
S + G+ H +R R GR +++D + S G GGVPD +
Sbjct: 3261 ISEERVDDGKEHSVRFERKGREGQMRIDNYREVDGRSTGILAMLNVDGNIFVGGVPDISK 3320
Query: 220 VSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNC 259
+ + ++F+GCI V +N +L+++ AI G NV C
Sbjct: 3321 ATGGL-FSNNFVGCIADVELNGVKLDLMATAIDGKNVKPC 3359
Score = 118 (46.6 bits), Expect = 4.9e-13, Sum P(4) = 4.9e-13
Identities = 56/235 (23%), Positives = 99/235 (42%)
Query: 32 GNKIKGRSKECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQ-FN 90
G + RS C ++ CN G C+ S C+CPLG TG C+ + ++ P F
Sbjct: 2744 GEYCQWRSNSCHDESCNT------GICLDNEESWQCVCPLGTTGLRCEEKTEIPQPLGFT 2797
Query: 91 G-SSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLY-NGHRADGVGDFIALYLNDRYVDF 148
+S+L + ++ S+ + + +A IL+Y + +L L V
Sbjct: 2798 SDTSFLAVKR-PVKFESI-KMKLRPQADSDEHILMYFASDYGSNTKQYTSLSLIANQVVL 2855
Query: 149 TFDLGTGAATLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQI----LSPGPFTQXX 204
T S + GE + + + G + VD S I L PG T+
Sbjct: 2856 TVRRPDKEVQKIRSETLEAGELIDVAVRQAGNALVMTVDGNQVSTIETDTLKPG--TEIF 2913
Query: 205 XXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNC 259
GG+P + SP ++ SF GC+ ++LIN+ ++++ + G ++ +C
Sbjct: 2914 I------GGLPP-GLNSPDDVVEQSFQGCVYEILINSQDVDLQNLSSSG-DISSC 2960
Score = 111 (44.1 bits), Expect = 5.4e-13, Sum P(4) = 5.4e-13
Identities = 52/232 (22%), Positives = 100/232 (43%)
Query: 70 PLGFTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHR 129
P+ T DL ++D +P +G + L ++ + LD+ I P GI+ + R
Sbjct: 2522 PVFSTVDL---QIDDFIPVIDGEP-IELPPLSDEEIVNLDIEITLNTANPKGII-FETKR 2576
Query: 130 ADGVGDFIA-----LYLNDRYVDF-----TFDLGTGAATLRSSNPISLGEWHKLRLTRTG 179
+ GD +A ++ + D+ FD+G G + ++NPI+ EW+ +++
Sbjct: 2577 INS-GDLLATPYDTIHHEAKITDYGTVLYEFDIGNGRQIVETTNPINPNEWNVIKIKNDK 2635
Query: 180 RHAYLQVDRFPSS--QILSPGPFTQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKV 237
+Q++ ++ Q +P P GG + P + + F G I +V
Sbjct: 2636 NQVTIQLNDESATIRQHTNPLPSLSTGVNRPVFIGGRHE-----PTNEA-NDFRGIISQV 2689
Query: 238 LINNHELNILGEAIQGVNVVNCAHPCITQPCGSGS-C--VPLYDGYKCVCTQ 286
+++ H + LG+A +VV T C +G+ C + G+ C C +
Sbjct: 2690 VLSGHNVG-LGDARIPSSVVKYDACASTNLCLNGANCRNANNHHGFSCECAE 2740
Score = 102 (41.0 bits), Expect = 4.9e-13, Sum P(4) = 4.9e-13
Identities = 26/75 (34%), Positives = 40/75 (53%)
Query: 436 RLHRTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVEDIEELTRSKYHHSFKGWI 495
R R G++ +RID + S G LN D ++VGGV DI + T + ++F G I
Sbjct: 3275 RFERKGREGQMRIDNYREVDGRSTGILAMLNVDGNIFVGGVPDISKATGGLFSNNFVGCI 3334
Query: 496 SNLILSNDYQVKLPL 510
+++ L+ VKL L
Sbjct: 3335 ADVELNG---VKLDL 3346
Score = 93 (37.8 bits), Expect = 4.9e-13, Sum P(4) = 4.9e-13
Identities = 40/156 (25%), Positives = 62/156 (39%)
Query: 263 CITQPCG-SGSCVPL-YDGYKCVCT-----QSCKESHLTEVMCASFDHGASFLHYLDPEI 315
C CG +G CVP Y C C +C E A FD G +F+ E
Sbjct: 3141 CANSTCGMNGQCVPRNMTHYTCECKLYYDGPTCSLFKPIE-HAARFD-GDAFIELSSDEF 3198
Query: 316 IHSSGLLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGS----SQSKDFLALGIH 371
H L K + I ++F KT +G++LW G Q +D++++GI
Sbjct: 3199 PH---LTSEKDE------IVAFKF------KTEQQNGVLLWQGQRPTVQQMEDYISVGIV 3243
Query: 372 NGYAHVMYXXXXXXXXXXXXQTKINNGVWHRLTVHR 407
NG+ H Y + ++++G H + R
Sbjct: 3244 NGHLHFSYELGGGAAHLISEE-RVDDGKEHSVRFER 3278
Score = 60 (26.2 bits), Expect = 5.4e-13, Sum P(4) = 5.4e-13
Identities = 12/34 (35%), Positives = 14/34 (41%)
Query: 47 CNKTPCEHGGKC-ITTPGSSYC-LCPLGFTGDLC 78
C PC C + G C +CP G G LC
Sbjct: 1058 CTPCPCPGASDCYLDNEGQVACRICPAGLQGRLC 1091
Score = 56 (24.8 bits), Expect = 2.5e-09, Sum P(4) = 2.5e-09
Identities = 25/100 (25%), Positives = 39/100 (39%)
Query: 260 AHPCITQPCGSGSCVPLYDGYKCVC---TQSCKESHLTEV-MCASFDHGASFLHYLDPEI 315
++ C + C +G C+ + ++CVC T + TE+ F SFL P +
Sbjct: 2751 SNSCHDESCNTGICLDNEESWQCVCPLGTTGLRCEEKTEIPQPLGFTSDTSFLAVKRP-V 2809
Query: 316 IHSSGLLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLIL 355
S + + Q D I Y F D T + L L
Sbjct: 2810 KFESIKMKLRPQADSDEHILMY-FASDYGSNTKQYTSLSL 2848
Score = 53 (23.7 bits), Expect = 2.3e-15, Sum P(2) = 2.3e-15
Identities = 9/31 (29%), Positives = 19/31 (61%)
Query: 1 MVKSDNQVILDDWNTVRVFRHRWDAWIQLND 31
+V++ N + ++WN +++ + IQLND
Sbjct: 2614 IVETTNPINPNEWNVIKIKNDKNQVTIQLND 2644
Score = 52 (23.4 bits), Expect = 3.4e-12, Sum P(4) = 3.4e-12
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 56 GKCITTPGSSYCLCPLGFTGDLCQ 79
G+ +T C+CP G+ G C+
Sbjct: 911 GQGLTAAEVEQCICPPGYVGTSCE 934
Score = 50 (22.7 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 67 CLCPLGFTGDLCQTRLDLQVPQFNGSSYLRYQG 99
C+CP G+ G C+ D P + S Y Y G
Sbjct: 634 CVCPPGYLGTSCE---DC-APGYERSGYGPYLG 662
Score = 46 (21.3 bits), Expect = 7.3e-06, Sum P(4) = 7.3e-06
Identities = 15/41 (36%), Positives = 17/41 (41%)
Query: 45 DKCNKTP-CEHGGKCITTP---GSSYCLCPLGFTGDLCQTR 81
D C T C +G C G S C C F G+ CQ R
Sbjct: 2711 DACASTNLCLNGANCRNANNHHGFS-CECAEEFHGEYCQWR 2750
Score = 41 (19.5 bits), Expect = 4.2e-11, Sum P(4) = 4.2e-11
Identities = 9/37 (24%), Positives = 11/37 (29%)
Query: 42 CLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLC 78
C+ + C G T P C C G C
Sbjct: 664 CVPIQPRHQQCGPGAVAPTAPAQGQCQCKASVIGPNC 700
Score = 37 (18.1 bits), Expect = 0.00037, Sum P(3) = 0.00037
Identities = 8/41 (19%), Positives = 20/41 (48%)
Query: 228 SSFIGCIQKVLINNHELNILGEAIQGVNV-VNCAHPCITQP 267
S +GC+Q +++ + N+ + +G + C + +P
Sbjct: 263 SDEVGCVQPTVVDPPQTNL--QVPRGTTFSLTCKAVAVPEP 301
>UNIPROTKB|Q06561 [details] [associations]
symbol:unc-52 "Basement membrane proteoglycan" species:6239
"Caenorhabditis elegans" [GO:0003674 "molecular_function"
evidence=ND] [GO:0030239 "myofibril assembly" evidence=IEP]
[GO:0005578 "proteinaceous extracellular matrix" evidence=IDA]
InterPro:IPR000742 InterPro:IPR002172 InterPro:IPR007110
Pfam:PF00057 PROSITE:PS50026 PROSITE:PS50068 PROSITE:PS50835
SMART:SM00181 SMART:SM00192 EMBL:Z93375 GO:GO:0008340 GO:GO:0009792
GO:GO:0006898 GO:GO:0040010 GO:GO:0007173 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0016477 GO:GO:0002119 GO:GO:0048644
GO:GO:0005198 GO:GO:0018996 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003598 SMART:SM00408 GO:GO:0016358 GO:GO:0040017
GO:GO:0000003 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030239 GO:GO:0030163 PROSITE:PS01186
Gene3D:4.10.400.10 InterPro:IPR023415 SUPFAM:SSF57424
PROSITE:PS01209 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 GeneTree:ENSGT00530000063501 GO:GO:0005604
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR009030 SUPFAM:SSF57184
Pfam:PF02210 GO:GO:0031581 InterPro:IPR018031 InterPro:IPR000034
Pfam:PF00052 SMART:SM00281 PROSITE:PS51115 GO:GO:0061199
eggNOG:NOG258321 OMA:GVTQQCA EMBL:L13458 EMBL:Z93395 EMBL:AF132883
PIR:C88369 PIR:F88369 PIR:T19821 RefSeq:NP_001022488.1
RefSeq:NP_497044.3 RefSeq:NP_497045.1 RefSeq:NP_497046.1
RefSeq:NP_497047.1 ProteinModelPortal:Q06561 SMR:Q06561
IntAct:Q06561 STRING:Q06561 PaxDb:Q06561 PRIDE:Q06561
EnsemblMetazoa:ZC101.2e GeneID:175126 KEGG:cel:CELE_ZC101.2
UCSC:ZC101.2e CTD:175126 WormBase:ZC101.2a WormBase:ZC101.2b
WormBase:ZC101.2c WormBase:ZC101.2e WormBase:ZC101.2f
InParanoid:Q06561 NextBio:886870 ArrayExpress:Q06561 Uniprot:Q06561
Length = 3375
Score = 234 (87.4 bits), Expect = 2.3e-15, Sum P(2) = 2.3e-15
Identities = 60/220 (27%), Positives = 106/220 (48%)
Query: 47 CNKTPCEHGGKCITTPGSSY-CLCPLGFTGDLCQTRLDLQ-VPQFNGSSYLRYQGLGEQY 104
C + C G+C+ + Y C C L + G C ++ +F+G +++ +
Sbjct: 3141 CANSTCGMNGQCVPRNMTHYTCECKLYYDGPTCSLFKPIEHAARFDGDAFIELSSDEFPH 3200
Query: 105 LSLLDLTIV---FKAIEPNGILLYNGHR--ADGVGDFIALYLNDRYVDFTFDLGTGAATL 159
L+ IV FK + NG+LL+ G R + D+I++ + + ++ F+++LG GAA L
Sbjct: 3201 LTSEKDEIVAFKFKTEQQNGVLLWQGQRPTVQQMEDYISVGIVNGHLHFSYELGGGAAHL 3260
Query: 160 RSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNI 219
S + G+ H +R R GR +++D + S G GGVPD +
Sbjct: 3261 ISEERVDDGKEHSVRFERKGREGQMRIDNYREVDGRSTGILAMLNVDGNIFVGGVPDISK 3320
Query: 220 VSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNC 259
+ + ++F+GCI V +N +L+++ AI G NV C
Sbjct: 3321 ATGGL-FSNNFVGCIADVELNGVKLDLMATAIDGKNVKPC 3359
Score = 118 (46.6 bits), Expect = 4.9e-13, Sum P(4) = 4.9e-13
Identities = 56/235 (23%), Positives = 99/235 (42%)
Query: 32 GNKIKGRSKECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQ-FN 90
G + RS C ++ CN G C+ S C+CPLG TG C+ + ++ P F
Sbjct: 2744 GEYCQWRSNSCHDESCNT------GICLDNEESWQCVCPLGTTGLRCEEKTEIPQPLGFT 2797
Query: 91 G-SSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLY-NGHRADGVGDFIALYLNDRYVDF 148
+S+L + ++ S+ + + +A IL+Y + +L L V
Sbjct: 2798 SDTSFLAVKR-PVKFESI-KMKLRPQADSDEHILMYFASDYGSNTKQYTSLSLIANQVVL 2855
Query: 149 TFDLGTGAATLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQI----LSPGPFTQXX 204
T S + GE + + + G + VD S I L PG T+
Sbjct: 2856 TVRRPDKEVQKIRSETLEAGELIDVAVRQAGNALVMTVDGNQVSTIETDTLKPG--TEIF 2913
Query: 205 XXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNC 259
GG+P + SP ++ SF GC+ ++LIN+ ++++ + G ++ +C
Sbjct: 2914 I------GGLPP-GLNSPDDVVEQSFQGCVYEILINSQDVDLQNLSSSG-DISSC 2960
Score = 111 (44.1 bits), Expect = 5.4e-13, Sum P(4) = 5.4e-13
Identities = 52/232 (22%), Positives = 100/232 (43%)
Query: 70 PLGFTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHR 129
P+ T DL ++D +P +G + L ++ + LD+ I P GI+ + R
Sbjct: 2522 PVFSTVDL---QIDDFIPVIDGEP-IELPPLSDEEIVNLDIEITLNTANPKGII-FETKR 2576
Query: 130 ADGVGDFIA-----LYLNDRYVDF-----TFDLGTGAATLRSSNPISLGEWHKLRLTRTG 179
+ GD +A ++ + D+ FD+G G + ++NPI+ EW+ +++
Sbjct: 2577 INS-GDLLATPYDTIHHEAKITDYGTVLYEFDIGNGRQIVETTNPINPNEWNVIKIKNDK 2635
Query: 180 RHAYLQVDRFPSS--QILSPGPFTQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKV 237
+Q++ ++ Q +P P GG + P + + F G I +V
Sbjct: 2636 NQVTIQLNDESATIRQHTNPLPSLSTGVNRPVFIGGRHE-----PTNEA-NDFRGIISQV 2689
Query: 238 LINNHELNILGEAIQGVNVVNCAHPCITQPCGSGS-C--VPLYDGYKCVCTQ 286
+++ H + LG+A +VV T C +G+ C + G+ C C +
Sbjct: 2690 VLSGHNVG-LGDARIPSSVVKYDACASTNLCLNGANCRNANNHHGFSCECAE 2740
Score = 102 (41.0 bits), Expect = 4.9e-13, Sum P(4) = 4.9e-13
Identities = 26/75 (34%), Positives = 40/75 (53%)
Query: 436 RLHRTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVEDIEELTRSKYHHSFKGWI 495
R R G++ +RID + S G LN D ++VGGV DI + T + ++F G I
Sbjct: 3275 RFERKGREGQMRIDNYREVDGRSTGILAMLNVDGNIFVGGVPDISKATGGLFSNNFVGCI 3334
Query: 496 SNLILSNDYQVKLPL 510
+++ L+ VKL L
Sbjct: 3335 ADVELNG---VKLDL 3346
Score = 93 (37.8 bits), Expect = 4.9e-13, Sum P(4) = 4.9e-13
Identities = 40/156 (25%), Positives = 62/156 (39%)
Query: 263 CITQPCG-SGSCVPL-YDGYKCVCT-----QSCKESHLTEVMCASFDHGASFLHYLDPEI 315
C CG +G CVP Y C C +C E A FD G +F+ E
Sbjct: 3141 CANSTCGMNGQCVPRNMTHYTCECKLYYDGPTCSLFKPIE-HAARFD-GDAFIELSSDEF 3198
Query: 316 IHSSGLLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGS----SQSKDFLALGIH 371
H L K + I ++F KT +G++LW G Q +D++++GI
Sbjct: 3199 PH---LTSEKDE------IVAFKF------KTEQQNGVLLWQGQRPTVQQMEDYISVGIV 3243
Query: 372 NGYAHVMYXXXXXXXXXXXXQTKINNGVWHRLTVHR 407
NG+ H Y + ++++G H + R
Sbjct: 3244 NGHLHFSYELGGGAAHLISEE-RVDDGKEHSVRFER 3278
Score = 60 (26.2 bits), Expect = 5.4e-13, Sum P(4) = 5.4e-13
Identities = 12/34 (35%), Positives = 14/34 (41%)
Query: 47 CNKTPCEHGGKC-ITTPGSSYC-LCPLGFTGDLC 78
C PC C + G C +CP G G LC
Sbjct: 1058 CTPCPCPGASDCYLDNEGQVACRICPAGLQGRLC 1091
Score = 56 (24.8 bits), Expect = 2.5e-09, Sum P(4) = 2.5e-09
Identities = 25/100 (25%), Positives = 39/100 (39%)
Query: 260 AHPCITQPCGSGSCVPLYDGYKCVC---TQSCKESHLTEV-MCASFDHGASFLHYLDPEI 315
++ C + C +G C+ + ++CVC T + TE+ F SFL P +
Sbjct: 2751 SNSCHDESCNTGICLDNEESWQCVCPLGTTGLRCEEKTEIPQPLGFTSDTSFLAVKRP-V 2809
Query: 316 IHSSGLLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLIL 355
S + + Q D I Y F D T + L L
Sbjct: 2810 KFESIKMKLRPQADSDEHILMY-FASDYGSNTKQYTSLSL 2848
Score = 53 (23.7 bits), Expect = 2.3e-15, Sum P(2) = 2.3e-15
Identities = 9/31 (29%), Positives = 19/31 (61%)
Query: 1 MVKSDNQVILDDWNTVRVFRHRWDAWIQLND 31
+V++ N + ++WN +++ + IQLND
Sbjct: 2614 IVETTNPINPNEWNVIKIKNDKNQVTIQLND 2644
Score = 52 (23.4 bits), Expect = 3.4e-12, Sum P(4) = 3.4e-12
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 56 GKCITTPGSSYCLCPLGFTGDLCQ 79
G+ +T C+CP G+ G C+
Sbjct: 911 GQGLTAAEVEQCICPPGYVGTSCE 934
Score = 50 (22.7 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 67 CLCPLGFTGDLCQTRLDLQVPQFNGSSYLRYQG 99
C+CP G+ G C+ D P + S Y Y G
Sbjct: 634 CVCPPGYLGTSCE---DC-APGYERSGYGPYLG 662
Score = 46 (21.3 bits), Expect = 7.3e-06, Sum P(4) = 7.3e-06
Identities = 15/41 (36%), Positives = 17/41 (41%)
Query: 45 DKCNKTP-CEHGGKCITTP---GSSYCLCPLGFTGDLCQTR 81
D C T C +G C G S C C F G+ CQ R
Sbjct: 2711 DACASTNLCLNGANCRNANNHHGFS-CECAEEFHGEYCQWR 2750
Score = 41 (19.5 bits), Expect = 4.2e-11, Sum P(4) = 4.2e-11
Identities = 9/37 (24%), Positives = 11/37 (29%)
Query: 42 CLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLC 78
C+ + C G T P C C G C
Sbjct: 664 CVPIQPRHQQCGPGAVAPTAPAQGQCQCKASVIGPNC 700
Score = 37 (18.1 bits), Expect = 0.00037, Sum P(3) = 0.00037
Identities = 8/41 (19%), Positives = 20/41 (48%)
Query: 228 SSFIGCIQKVLINNHELNILGEAIQGVNV-VNCAHPCITQP 267
S +GC+Q +++ + N+ + +G + C + +P
Sbjct: 263 SDEVGCVQPTVVDPPQTNL--QVPRGTTFSLTCKAVAVPEP 301
>RGD|1309947 [details] [associations]
symbol:Crb1 "crumbs homolog 1 (Drosophila)" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0005902 "microvillus" evidence=ISO] [GO:0007009
"plasma membrane organization" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0016044 "cellular membrane
organization" evidence=ISO] [GO:0042462 "eye photoreceptor cell
development" evidence=ISO] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 Pfam:PF07645 PROSITE:PS01187
PROSITE:PS50026 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005886 GO:GO:0007009 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186
InterPro:IPR001791 SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025
GO:GO:0005902 Pfam:PF02210 GO:GO:0042462 Pfam:PF12661
OrthoDB:EOG4VX24C GeneTree:ENSGT00690000101660 IPI:IPI00371997
ProteinModelPortal:D3ZZL8 Ensembl:ENSRNOT00000032122 Uniprot:D3ZZL8
Length = 1408
Score = 186 (70.5 bits), Expect = 2.5e-15, Sum P(2) = 2.5e-15
Identities = 86/350 (24%), Positives = 146/350 (41%)
Query: 47 CNKTPCEHGGKCIT--TPGSSY--CLCPLGFTGDLCQTRLDLQVPQFNGSSYLRYQGLGE 102
C C + GKCI G C CP G+ G LC+T L + NG ++ G
Sbjct: 447 CTHHQCLNNGKCIPHFQNGQHEFTCQCPSGYAGPLCETVTTLSF-ESNGFLWVT-SGSHT 504
Query: 103 QYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDL-GTGAATLRS 161
S ++++ F+ ++PN +LL G++ V L L D V + ++ L
Sbjct: 505 SMGSECNISLKFQTVQPNALLLVRGNKDMSV----KLELLDGCVHLSIEVWNQSKVLLYI 560
Query: 162 SNPISLGEWHKLRLT--RT---GRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVP- 215
S+ S GEWH + +T T + ++ + +S GG+P
Sbjct: 561 SHNTSDGEWHLVEVTFAETITLALNGSSCKEKCTTKSSVSIENHQSICALQNSFLGGLPM 620
Query: 216 ----DYNIVSPKVKIKS--SFIGCIQKVLIN-NH-ELNILGEAIQGVNVVNCAHP--CIT 265
D V + S SF+GC+Q + + NH L + + C C +
Sbjct: 621 GTASDSMSVLNIYNVPSTPSFVGCLQDIRFDLNHITLESISSGLSSNVKAGCLRKDWCES 680
Query: 266 QPCGS-GSCVPLYDGYKCVCTQSCKESH-LTEVMCASFDHGASFLHYLDPEIIHSSGLLH 323
QPC + G C+ L+ GY+C C + S+ L E + F D S+G +
Sbjct: 681 QPCQNRGRCINLWQGYRCECDRPYAGSNCLKEYVAGRFGQD-------D-----STG--Y 726
Query: 324 YKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNG 373
F+++ +F G FN+ M ++T G +L G+S + ++ + + +G
Sbjct: 727 AAFKVNDNF---GQNFNLSMFVRTRQPLGFLLTLGNS-TYQYVCVWLEHG 772
Score = 161 (61.7 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 111/507 (21%), Positives = 196/507 (38%)
Query: 42 CL-EDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLC-QTRLDLQVPQFNGSSYLRYQG 99
CL +D C PC++ G+CI C C + G C + + + Q + + Y ++
Sbjct: 672 CLRKDWCESQPCQNRGRCINLWQGYRCECDRPYAGSNCLKEYVAGRFGQDDSTGYAAFK- 730
Query: 100 LGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGT-GAAT 158
+ + + +L++ + +P G LL G+ ++ ++L + L T G+
Sbjct: 731 VNDNFGQNFNLSMFVRTRQPLGFLLTLGN---STYQYVCVWLEHG----SLALKTPGSPK 783
Query: 159 LRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILS--PGPFTQXXXXXXXXXGGVPD 216
L ++ +S G H + L R +++ + SSQ L P GG+PD
Sbjct: 784 LVANFFLSDGNAHLISL----RIKPNEIELYQSSQNLGFMSVPAWTIQRGDVIFIGGLPD 839
Query: 217 YNIVSPKVKIKSSFI-GCIQKVLINNHELNILGEAIQG-------VNVVN-CA--HPCIT 265
K + F+ GCIQ V +N+ L + VNV C + C +
Sbjct: 840 RE----KTEAYGGFLKGCIQDVRLNSQNLEFFPNSTNSAQHDPVLVNVTQGCPGDNVCKS 895
Query: 266 QPCGSGS-CVPLYDGYKCVCTQSCKESHLTEVMCASFDHGASFLH-YLDP---EIIHSSG 320
PC +G C L+D + C C + EV L P E I ++
Sbjct: 896 NPCHNGGVCHSLWDDFSCSCPTNTSGRACDEVQWCQLSPCPPIAECQLVPQGFECIANAA 955
Query: 321 L--LHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVM 378
L + + IT NI +T ++ +IL + + +FL + I +
Sbjct: 956 FSGLSSEILFRSNGNITRELTNITFGFRTQDTNAVILH--AEKEPEFLNISIQDSRLLFQ 1013
Query: 379 YXXXXXXXXXXXXQTK-INNGVWHRLTVHRNFMVVMHGSSHTRSNKSSKIEFKCLSIQRL 437
++ +N+G WHR+T F ++ + T S +++ + +
Sbjct: 1014 LRSGNSFYTLHLTGSQLVNDGAWHRVT----FSMI-DPRAQT-SLWQMEVDDQTPFVISA 1067
Query: 438 HRTGKQCLIRIDTDYSM--QSISGGKFEQ--LNTDS--GLYVGGVEDIEELTRSKYHHSF 491
TG ++ +TD + Q++ K Q L+T GLY+ E + T F
Sbjct: 1068 VATGNLNFLKDNTDIYVGDQAVDNQKGLQGCLSTVQIGGLYLSYFESLHGFTSKPQEEQF 1127
Query: 492 KGWISNLILSNDYQVKLPLSRSQGSSC 518
+N+ L+ LPLS S C
Sbjct: 1128 LKVSTNVALTGC----LPLSACHSSPC 1150
Score = 95 (38.5 bits), Expect = 2.5e-15, Sum P(2) = 2.5e-15
Identities = 15/44 (34%), Positives = 22/44 (50%)
Query: 37 GRSKECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQT 80
G + + + C C+HGG C P C+CP G+ G C+T
Sbjct: 105 GLTCDTATNSCGGNLCQHGGTCHKDPEHPVCICPPGYAGRFCET 148
Score = 91 (37.1 bits), Expect = 6.6e-15, Sum P(2) = 6.6e-15
Identities = 17/42 (40%), Positives = 23/42 (54%)
Query: 41 ECLEDKCNKTPCEHGGKCITTPG--SSYCLCPLGFTGDLCQT 80
E L+D C +PC+ C+ PG S C CP G++G C T
Sbjct: 69 EDLKDPCLSSPCQGTATCVNIPGERSFLCQCPPGYSGLTCDT 110
Score = 77 (32.2 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 15/37 (40%), Positives = 19/37 (51%)
Query: 40 KECLED--KCNKTPCEHGGKCITTPGSSYCLCPLGFT 74
+ C ED +C PC +GG C PG+ C CP T
Sbjct: 394 RHCEEDIDECLPNPCLNGGTCQNLPGNYTCHCPFDDT 430
Score = 73 (30.8 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 17/60 (28%), Positives = 28/60 (46%)
Query: 36 KGRSKECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDL---QVPQFNGS 92
+GR + D+C PC + C+ G C+CP ++G+ L Q+ +NGS
Sbjct: 180 QGRHCDLEVDECVSDPCMNEAVCLNEIGRYTCVCPQEYSGNNLSIXLXXGXSQICLYNGS 239
Score = 54 (24.1 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 17/53 (32%), Positives = 23/53 (43%)
Query: 32 GNKIKGRSKECLEDKCNKTPCEHGGKCITTPGSSYCL-CPLGFTGDLCQTRLD 83
GN+ G S C C G + G SY C G+TG LC+T ++
Sbjct: 293 GNR--GISASASVPLCFLKGCPEGLQNQDHLGDSYTTNCSAGYTGALCETDIN 343
Score = 51 (23.0 bits), Expect = 9.2e-11, Sum P(2) = 9.2e-11
Identities = 6/14 (42%), Positives = 11/14 (78%)
Query: 45 DKCNKTPCEHGGKC 58
++C+ PC+ GG+C
Sbjct: 343 NECSSNPCQFGGEC 356
Score = 43 (20.2 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 13/42 (30%), Positives = 17/42 (40%)
Query: 46 KCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVP 87
+C C++ C P S C C L DL DL+ P
Sbjct: 35 RCLSNSCQNNSTCKRFPQDSSC-C-LDTANDLDTDCEDLKDP 74
>UNIPROTKB|F6XUN7 [details] [associations]
symbol:CRB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 SMART:SM00179
SMART:SM00181 InterPro:IPR000152 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186
InterPro:IPR001791 SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025
Pfam:PF02210 Pfam:PF12661 GeneTree:ENSGT00690000101660
EMBL:AAEX03005047 Ensembl:ENSCAFT00000039475 Uniprot:F6XUN7
Length = 1320
Score = 196 (74.1 bits), Expect = 2.6e-15, Sum P(3) = 2.6e-15
Identities = 70/262 (26%), Positives = 112/262 (42%)
Query: 47 CNKTPCEHGGKCIT-----TPGSSYCLCPLGFTGDLCQTRLDLQVPQFNGSSYLRY-QGL 100
C + C + G CI G S CLCP G+TG LC+ L F G+ +L G
Sbjct: 473 CTRHQCLNNGMCIPHFQNGQHGFS-CLCPSGYTGPLCELVTTLS---FEGNGFLWITSGP 528
Query: 101 GEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLR 160
+ ++ + F ++P +LL+ G+RA FI L L Y+ + + + L
Sbjct: 529 ATGKGLVCNMALSFLTVQPMALLLFRGNRAM----FIMLELRGGYIHLSIQVNNQSKVLL 584
Query: 161 S-SNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILS--PGPFTQXXXXXX---XXXGGV 214
S+ S G WH + +T +D + ++ P PF GG+
Sbjct: 585 YISHDTSDGAWHSVEVTFAEAVTLTLLDNTCKEKCITQAPSPFESHRSICAFQNSFLGGL 644
Query: 215 P----DYNIVSPKV-KIKS--SFIGCIQKVLINNHELNILG-EAIQGVNV-VNCAHP--C 263
P Y I + + S SF+GC+Q V I+++ + + + +NV C C
Sbjct: 645 PGGMTSYGIALLNIYNLPSTPSFVGCLQDVKIDSNHITLEDISSSSSLNVKAGCERKDWC 704
Query: 264 ITQPCGS-GSCVPLYDGYKCVC 284
QPC + G C+ L+ Y+C C
Sbjct: 705 ERQPCQNRGRCINLWLNYQCDC 726
Score = 151 (58.2 bits), Expect = 8.7e-12, Sum P(2) = 8.7e-12
Identities = 78/390 (20%), Positives = 159/390 (40%)
Query: 44 EDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLC-QTRLDLQVPQFNGSSYLRYQGLGE 102
+D C + PC++ G+CI + C C + G C + + + Q + + + + L +
Sbjct: 701 KDWCERQPCQNRGRCINLWLNYQCDCYRPYEGPNCLREYVAGRFGQDDSTGFAAFN-LDK 759
Query: 103 QYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSS 162
Y + +++ + P+G+LL ++ +I ++L + L G++ L +
Sbjct: 760 SYEENVTISMFVRTHRPSGLLLALENKTY---QYICVWLEHGRLAM---LHPGSSKLVAK 813
Query: 163 NPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILS--PGPFTQXXXXXXXXXGGVPDYNIV 220
+S G H + L +++ + SSQ L P + GG+P+ +
Sbjct: 814 FVLSDGNVHLISLKIQPN----KIELYQSSQNLGFISAPTWKIQKGDVIYIGGLPERS-- 867
Query: 221 SPKVKIKSSFI-GCIQKVLINNHELNILGEAIQG-------VNVVN-CA--HPCITQPCG 269
+ + K F GCIQ + NN L +I VNV C+ + C + PC
Sbjct: 868 --QTEAKGGFFKGCIQDIRFNNQNLEFFPNSISNASHNPTLVNVTQGCSGDNMCKSNPCH 925
Query: 270 SGS-CVPLYDGYKCVCT-----QSCKESHLTEV-------MCASFDHGASFLHYLDPEII 316
+G C L+D + C C ++C++ E+ C + G F +
Sbjct: 926 NGGVCYSLWDDFSCSCPANTAGKACEQVQWCELSPCPPGAQCQAVPRG--FECIANAVFN 983
Query: 317 HSSGLLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNG-YA 375
S + ++ ++ +T NI + +T ++ +IL + + +FL + I +
Sbjct: 984 AQSSEILFRSNGNITRELT----NITLGFRTRDANVIILH--AKKEPEFLNISIRDSRLL 1037
Query: 376 HVMYXXXXXXXXXXXXQTKINNGVWHRLTV 405
+ +N+G+WH++T+
Sbjct: 1038 FQLQSGNSFYMLSLTSLQSVNDGIWHQVTL 1067
Score = 115 (45.5 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 42 CLE-DKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLD 83
CL+ + CN +PC HGG C S +C CPLG++G C+ +D
Sbjct: 1164 CLQLNACNSSPCLHGGNCEDIYSSYHCSCPLGWSGTHCELNID 1206
Score = 100 (40.3 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 19/48 (39%), Positives = 24/48 (50%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLD--LQVPQFNGS 92
C PC+HGG C P C+CP G+ G C+ LD P NG+
Sbjct: 142 CGINPCQHGGICHQDPVHPICVCPDGYFGRFCENDLDECASSPCHNGA 189
Score = 97 (39.2 bits), Expect = 8.7e-12, Sum P(2) = 8.7e-12
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 40 KEC--LEDKCNKTPCEHGGKCITTPG--SSYCLCPLGFTGDLCQTRL 82
K+C + + C PC+ C+ PG S C CP GF+G C+T +
Sbjct: 93 KDCDNMRNPCFSNPCQGNATCVNNPGERSFLCKCPPGFSGTTCETAI 139
Score = 81 (33.6 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 51/224 (22%), Positives = 87/224 (38%)
Query: 89 FNG-SSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVD 147
FN SS + ++ G L ++T+ F+ + N I+L+ A +F+ + + D +
Sbjct: 982 FNAQSSEILFRSNGNITRELTNITLGFRTRDANVIILH----AKKEPEFLNISIRDSRLL 1037
Query: 148 FTFDLGTG--AATLRSSNPISLGEWHKLRLTRTGRHAY-----LQVD-RFPS-SQILSPG 198
F G +L S ++ G WH++ L+ T A ++VD + PS + ++ G
Sbjct: 1038 FQLQSGNSFYMLSLTSLQSVNDGIWHQVTLSMTDPLAQASRWQMEVDNQAPSVTSAVATG 1097
Query: 199 PFTQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNH-------ELNILGEAI 251
G N K + + I I N H E L ++
Sbjct: 1098 SLNFLKDNTDIYVGDRAIDNSQGLKGCLSTIEISGIYLSYFNVHGFTNKPQEEQFLKISM 1157
Query: 252 QGVNVVNCA--HPCITQPC-GSGSCVPLYDGYKCVCTQSCKESH 292
V V C + C + PC G+C +Y Y C C +H
Sbjct: 1158 NSV-VSGCLQLNACNSSPCLHGGNCEDIYSSYHCSCPLGWSGTH 1200
Score = 75 (31.5 bits), Expect = 2.6e-15, Sum P(3) = 2.6e-15
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 45 DKCNKTPCEHGGKCITTPGSSYCLCP 70
D+C+ PC++GG C G C CP
Sbjct: 427 DECSSNPCQNGGTCENLSGHYTCRCP 452
Score = 70 (29.7 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 14/29 (48%), Positives = 16/29 (55%)
Query: 260 AHPCITQPC-GSGSCVPLYDGYKCVCTQS 287
A C +QPC G CV Y+ Y C CT S
Sbjct: 291 ADECASQPCLHGGLCVDGYNSYSCNCTGS 319
Score = 62 (26.9 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 14/54 (25%), Positives = 24/54 (44%)
Query: 253 GVNVVNCAHPCITQPCGSGS-CVPLYDGYKCVCTQS-----CKESHLTEVMCAS 300
GVN C C +G+ C+ GY C C+ + C+ + L+ +C +
Sbjct: 1235 GVNCETDIDNCQNHQCANGATCISDPSGYSCHCSGNFTGKFCRHTRLSSTVCGN 1288
Score = 60 (26.2 bits), Expect = 8.8e-14, Sum P(3) = 8.8e-14
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 37 GRSKECLEDKCNKTPCEHGGKCIT-TPGSSY 66
G E ++CN PC+ GG CI +P Y
Sbjct: 361 GAQCETYINECNGNPCQSGGTCIELSPEKPY 391
Score = 54 (24.1 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 15/70 (21%), Positives = 26/70 (37%)
Query: 336 GYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTKI 395
G N+ + T L+L+ G+ F+ L + GY H+
Sbjct: 533 GLVCNMALSFLTVQPMALLLFRGNRAM--FIMLELRGGYIHLSIQVNNQSKVLLYISHDT 590
Query: 396 NNGVWHRLTV 405
++G WH + V
Sbjct: 591 SDGAWHSVEV 600
Score = 53 (23.7 bits), Expect = 2.6e-15, Sum P(3) = 2.6e-15
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 263 CITQPCGSGSCVPLYDGYKCVC 284
C + PC G+C Y+C C
Sbjct: 1208 CFSNPCIHGNCSDRVAAYRCRC 1229
>UNIPROTKB|F1Q0H7 [details] [associations]
symbol:CRB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042462 "eye photoreceptor cell development"
evidence=IEA] [GO:0007009 "plasma membrane organization"
evidence=IEA] [GO:0005902 "microvillus" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005509 "calcium ion binding"
evidence=IEA] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005886
GO:GO:0007009 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 GO:GO:0005902 Pfam:PF02210
GO:GO:0042462 Pfam:PF12661 GeneTree:ENSGT00690000101660
EMBL:AAEX03005047 ProteinModelPortal:F1Q0H7
Ensembl:ENSCAFT00000018057 OMA:ATFLNDS Uniprot:F1Q0H7
Length = 1408
Score = 196 (74.1 bits), Expect = 3.3e-15, Sum P(3) = 3.3e-15
Identities = 70/262 (26%), Positives = 112/262 (42%)
Query: 47 CNKTPCEHGGKCIT-----TPGSSYCLCPLGFTGDLCQTRLDLQVPQFNGSSYLRY-QGL 100
C + C + G CI G S CLCP G+TG LC+ L F G+ +L G
Sbjct: 445 CTRHQCLNNGMCIPHFQNGQHGFS-CLCPSGYTGPLCELVTTLS---FEGNGFLWITSGP 500
Query: 101 GEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLR 160
+ ++ + F ++P +LL+ G+RA FI L L Y+ + + + L
Sbjct: 501 ATGKGLVCNMALSFLTVQPMALLLFRGNRAM----FIMLELRGGYIHLSIQVNNQSKVLL 556
Query: 161 S-SNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILS--PGPFTQXXXXXX---XXXGGV 214
S+ S G WH + +T +D + ++ P PF GG+
Sbjct: 557 YISHDTSDGAWHSVEVTFAEAVTLTLLDNTCKEKCITQAPSPFESHRSICAFQNSFLGGL 616
Query: 215 P----DYNIVSPKV-KIKS--SFIGCIQKVLINNHELNILG-EAIQGVNV-VNCAHP--C 263
P Y I + + S SF+GC+Q V I+++ + + + +NV C C
Sbjct: 617 PGGMTSYGIALLNIYNLPSTPSFVGCLQDVKIDSNHITLEDISSSSSLNVKAGCERKDWC 676
Query: 264 ITQPCGS-GSCVPLYDGYKCVC 284
QPC + G C+ L+ Y+C C
Sbjct: 677 ERQPCQNRGRCINLWLNYQCDC 698
Score = 149 (57.5 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 79/393 (20%), Positives = 158/393 (40%)
Query: 44 EDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVP----QFNGSSYLRYQG 99
+D C + PC++ G+CI + C C + G C + V Q + + + +
Sbjct: 673 KDWCERQPCQNRGRCINLWLNYQCDCYRPYEGPNCLRDTEEYVAGRFGQDDSTGFAAFN- 731
Query: 100 LGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATL 159
L + Y + +++ + P+G+LL ++ +I ++L + L G++ L
Sbjct: 732 LDKSYEENVTISMFVRTHRPSGLLLALENKTY---QYICVWLEHGRLAM---LHPGSSKL 785
Query: 160 RSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILS--PGPFTQXXXXXXXXXGGVPDY 217
+ +S G H + L +++ + SSQ L P + GG+P+
Sbjct: 786 VAKFVLSDGNVHLISLKIQPN----KIELYQSSQNLGFISAPTWKIQKGDVIYIGGLPER 841
Query: 218 NIVSPKVKIKSSFI-GCIQKVLINNHELNILGEAIQG-------VNVVN-CA--HPCITQ 266
+ + + K F GCIQ + NN L +I VNV C+ + C +
Sbjct: 842 S----QTEAKGGFFKGCIQDIRFNNQNLEFFPNSISNASHNPTLVNVTQGCSGDNMCKSN 897
Query: 267 PCGSGS-CVPLYDGYKCVCT-----QSCKESHLTEV-------MCASFDHGASFLHYLDP 313
PC +G C L+D + C C ++C++ E+ C + G F +
Sbjct: 898 PCHNGGVCYSLWDDFSCSCPANTAGKACEQVQWCELSPCPPGAQCQAVPRG--FECIANA 955
Query: 314 EIIHSSGLLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNG 373
S + ++ ++ +T NI + +T ++ +IL + + +FL + I +
Sbjct: 956 VFNAQSSEILFRSNGNITRELT----NITLGFRTRDANVIILH--AKKEPEFLNISIRDS 1009
Query: 374 -YAHVMYXXXXXXXXXXXXQTKINNGVWHRLTV 405
+ +N+G+WH++T+
Sbjct: 1010 RLLFQLQSGNSFYMLSLTSLQSVNDGIWHQVTL 1042
Score = 115 (45.5 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 42 CLE-DKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLD 83
CL+ + CN +PC HGG C S +C CPLG++G C+ +D
Sbjct: 1139 CLQLNACNSSPCLHGGNCEDIYSSYHCSCPLGWSGTHCELNID 1181
Score = 100 (40.3 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 19/48 (39%), Positives = 24/48 (50%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLD--LQVPQFNGS 92
C PC+HGG C P C+CP G+ G C+ LD P NG+
Sbjct: 114 CGINPCQHGGICHQDPVHPICVCPDGYFGRFCENDLDECASSPCHNGA 161
Score = 97 (39.2 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 40 KEC--LEDKCNKTPCEHGGKCITTPG--SSYCLCPLGFTGDLCQTRL 82
K+C + + C PC+ C+ PG S C CP GF+G C+T +
Sbjct: 65 KDCDNMRNPCFSNPCQGNATCVNNPGERSFLCKCPPGFSGTTCETAI 111
Score = 81 (33.6 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 51/224 (22%), Positives = 87/224 (38%)
Query: 89 FNG-SSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVD 147
FN SS + ++ G L ++T+ F+ + N I+L+ A +F+ + + D +
Sbjct: 957 FNAQSSEILFRSNGNITRELTNITLGFRTRDANVIILH----AKKEPEFLNISIRDSRLL 1012
Query: 148 FTFDLGTG--AATLRSSNPISLGEWHKLRLTRTGRHAY-----LQVD-RFPS-SQILSPG 198
F G +L S ++ G WH++ L+ T A ++VD + PS + ++ G
Sbjct: 1013 FQLQSGNSFYMLSLTSLQSVNDGIWHQVTLSMTDPLAQASRWQMEVDNQAPSVTSAVATG 1072
Query: 199 PFTQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNH-------ELNILGEAI 251
G N K + + I I N H E L ++
Sbjct: 1073 SLNFLKDNTDIYVGDRAIDNSQGLKGCLSTIEISGIYLSYFNVHGFTNKPQEEQFLKISM 1132
Query: 252 QGVNVVNCA--HPCITQPC-GSGSCVPLYDGYKCVCTQSCKESH 292
V V C + C + PC G+C +Y Y C C +H
Sbjct: 1133 NSV-VSGCLQLNACNSSPCLHGGNCEDIYSSYHCSCPLGWSGTH 1175
Score = 75 (31.5 bits), Expect = 3.3e-15, Sum P(3) = 3.3e-15
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 45 DKCNKTPCEHGGKCITTPGSSYCLCP 70
D+C+ PC++GG C G C CP
Sbjct: 399 DECSSNPCQNGGTCENLSGHYTCRCP 424
Score = 70 (29.7 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 14/29 (48%), Positives = 16/29 (55%)
Query: 260 AHPCITQPC-GSGSCVPLYDGYKCVCTQS 287
A C +QPC G CV Y+ Y C CT S
Sbjct: 263 ADECASQPCLHGGLCVDGYNSYSCNCTGS 291
Score = 62 (26.9 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 14/54 (25%), Positives = 24/54 (44%)
Query: 253 GVNVVNCAHPCITQPCGSGS-CVPLYDGYKCVCTQS-----CKESHLTEVMCAS 300
GVN C C +G+ C+ GY C C+ + C+ + L+ +C +
Sbjct: 1210 GVNCETDIDNCQNHQCANGATCISDPSGYSCHCSGNFTGKFCRHTRLSSTVCGN 1263
Score = 60 (26.2 bits), Expect = 1.1e-13, Sum P(3) = 1.1e-13
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 37 GRSKECLEDKCNKTPCEHGGKCIT-TPGSSY 66
G E ++CN PC+ GG CI +P Y
Sbjct: 333 GAQCETYINECNGNPCQSGGTCIELSPEKPY 363
Score = 57 (25.1 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 260 AHPCITQPCGSGS-CVPLYDGYKCVC 284
A C + PC G C L G++CVC
Sbjct: 1300 ADECASAPCAHGGLCRGLGRGFQCVC 1325
Score = 54 (24.1 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 15/70 (21%), Positives = 26/70 (37%)
Query: 336 GYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTKI 395
G N+ + T L+L+ G+ F+ L + GY H+
Sbjct: 505 GLVCNMALSFLTVQPMALLLFRGNRAM--FIMLELRGGYIHLSIQVNNQSKVLLYISHDT 562
Query: 396 NNGVWHRLTV 405
++G WH + V
Sbjct: 563 SDGAWHSVEV 572
Score = 53 (23.7 bits), Expect = 3.3e-15, Sum P(3) = 3.3e-15
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 263 CITQPCGSGSCVPLYDGYKCVC 284
C + PC G+C Y+C C
Sbjct: 1183 CFSNPCIHGNCSDRVAAYRCRC 1204
>UNIPROTKB|J9NSB0 [details] [associations]
symbol:NRXN2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007416 "synapse assembly" evidence=IEA] [GO:0007269
"neurotransmitter secretion" evidence=IEA] InterPro:IPR000742
InterPro:IPR027160 PROSITE:PS50026 SMART:SM00181 GO:GO:0016021
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025
Pfam:PF02210 InterPro:IPR003585 SMART:SM00294
GeneTree:ENSGT00560000076996 PANTHER:PTHR10127:SF307
EMBL:AAEX03011644 Ensembl:ENSCAFT00000047054 Uniprot:J9NSB0
Length = 1508
Score = 192 (72.6 bits), Expect = 8.6e-13, Sum P(2) = 8.6e-13
Identities = 86/328 (26%), Positives = 143/328 (43%)
Query: 92 SSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFD 151
SSYL L + Y S+ L FK P+G+LL+N +G DFI + L Y+ + FD
Sbjct: 916 SSYLALATL-QAYASM-HLFFQFKTTAPDGLLLFNS--GNG-NDFIVIELVKGYIHYVFD 970
Query: 152 LGTGAATLR--SSNPISLGEWHKLRLTRTGRHAY-LQVDRFPSSQILSPGPFTQXXXXXX 208
LG G + ++ S P++ +WH + ++R + + L++D +Q S G
Sbjct: 971 LGNGPSLMKGNSDKPVNDNQWHNVVVSRDPGNVHTLKIDSRTVTQH-SNGA-RNLDLKGE 1028
Query: 209 XXXGGVPDYNIVS--PK-VKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVN--CAHP- 262
GG+ N+ S PK V + F GC+ V +N +++ +A+ + V C P
Sbjct: 1029 LYIGGLSK-NMFSNLPKLVASRDGFQGCLASVDLNGRLPDLIADALHRIGQVERGCDGPS 1087
Query: 263 --CITQPCGS-GSCVPLYDGYKCVCTQS------CKESHLTEVMCASFDHGASFLHYLDP 313
C + C + G C+ +DG+ C CT + C + T + F G + + Y P
Sbjct: 1088 TTCTEESCANQGVCLQQWDGFTCDCTMTSYGGPVCNDPGTTYI----FGKGGALITYTWP 1143
Query: 314 EIIHSSGLLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNG 373
S + +L V F T + +R+ S+SGL G D+L L I G
Sbjct: 1144 PNDRPSTRMD---RLAVGFS-THQRSAVLVRV--DSASGL----G-----DYLQLHIDQG 1188
Query: 374 YAHVMYXXXXXXXXXXXXQTKINNGVWH 401
V++ +++G +H
Sbjct: 1189 TVGVIFNVGTDDITIDEPNAIVSDGKYH 1216
Score = 180 (68.4 bits), Expect = 4.5e-15, Sum P(3) = 4.5e-15
Identities = 77/290 (26%), Positives = 131/290 (45%)
Query: 110 LTIVFKAIEPNGILLYN-GHRAD-GVG--------DFIALYLNDRYVDFTFDLGTGAATL 159
+++ F+ EPNG+LL++ G RA G G D+ A+ L D Y+ D+G+G L
Sbjct: 507 ISLDFRTTEPNGLLLFSQGRRAGAGAGSHSSAQRADYFAMELLDGYLYLLLDMGSGGIKL 566
Query: 160 R-SSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYN 218
R SS ++ GEW + R GR + V+ S+ L+ G GG+P+
Sbjct: 567 RASSRKVNDGEWCHVDFQRDGRKGSISVNS-RSTPFLATGESEILDLESELYLGGLPEGG 625
Query: 219 IVS----PKV---KIKSSFIGCIQKVLIN--NHELNILGEAIQGVNVVN-CAHP----CI 264
V P+V +++ ++GC++ + I+ + +L L EA V + C+ C
Sbjct: 626 RVDLPLPPEVWTAALRAGYVGCVRDLFIDGRSRDLRGLAEAQGAVGITPFCSRETLKQCA 685
Query: 265 TQPCGSGS-CVPLYDGYKCVCTQSCKESHLTEVMCASFDHGASFLHYLDPEIIHSSGLLH 323
+ PC +G C ++ + C C + L V C + A+ L Y G ++
Sbjct: 686 SAPCRNGGICREGWNRFVCDCVGT---GFLGRV-C---EREATVLSY--------DGSMY 730
Query: 324 YKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNG 373
K L T E ++ +R + + GL++ T S +S D L L + G
Sbjct: 731 MKIMLPNAMH-TEAE-DVSLRFMSQRAYGLMMATTSRESADTLRLELDGG 778
Score = 143 (55.4 bits), Expect = 4.7e-11, Sum P(3) = 4.7e-11
Identities = 45/181 (24%), Positives = 82/181 (45%)
Query: 72 GFTGDLCQTRLDLQ--VPQFNGSSYLRYQGLGEQYLSLLD-LTIVFKAIEPNGILLYNGH 128
G GD+ Q + V F G+ + Y S D +T+ F+ ++ NG++L+ G
Sbjct: 278 GGAGDVHQPTKGKEEFVATFKGNEFFCYDLSHNPIQSSTDEITLAFRTLQRNGLMLHTGK 337
Query: 129 RADGVGDFIALYLNDRYVDFTFDLGTGA--ATLRSSN-PISLGEWHKLRLTRTGRHAYLQ 185
AD ++ L L V +LG+GA A + N + WH +R+TR R +
Sbjct: 338 SAD----YVNLSLKSGAVWLVINLGSGAFEALVEPVNGKFNDNAWHDVRVTRNLRQVTIS 393
Query: 186 VDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELN 245
VD ++ + +T GG P+ + P + ++F+GC++ V+ N++
Sbjct: 394 VDGILTTTGYTQEDYTMLGSDDFFYIGGSPNTADL-PGSPVSNNFMGCLKDVVYKNNDFK 452
Query: 246 I 246
+
Sbjct: 453 L 453
Score = 139 (54.0 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 42/159 (26%), Positives = 77/159 (48%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCPL-GFTGDLCQTRLDLQVPQFN-GSSYLRYQGL-GEQ 103
C + C + G C+ C C + + G +C + F G + + Y ++
Sbjct: 1090 CTEESCANQGVCLQQWDGFTCDCTMTSYGGPVCNDPGTTYI--FGKGGALITYTWPPNDR 1147
Query: 104 YLSLLD-LTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSS 162
+ +D L + F + + +L+ A G+GD++ L+++ V F++GT T+
Sbjct: 1148 PSTRMDRLAVGFSTHQRSAVLV-RVDSASGLGDYLQLHIDQGTVGVIFNVGTDDITIDEP 1206
Query: 163 NPI-SLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPF 200
N I S G++H +R TR+G +A LQVD +P ++ G F
Sbjct: 1207 NAIVSDGKYHVVRFTRSGGNATLQVDSWPVNERYPAGNF 1245
Score = 127 (49.8 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 49/212 (23%), Positives = 90/212 (42%)
Query: 39 SKECLEDKCNKTPCEHGGKCITTPGSSYCLCP-LGFTGDLCQTRLDLQVPQFNGSSYLRY 97
S+E L+ +C PC +GG C C C GF G +C+ + V ++GS Y++
Sbjct: 677 SRETLK-QCASAPCRNGGICREGWNRFVCDCVGTGFLGRVCER--EATVLSYDGSMYMKI 733
Query: 98 QGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDL----- 152
+ D+++ F + G+++ R D + L L+ + T +L
Sbjct: 734 MLPNAMHTEAEDVSLRFMSQRAYGLMMATTSRESA--DTLRLELDGGQMKLTVNLDCLRV 791
Query: 153 ----GTGAATLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXX 208
G TL + + ++ EWH +R+ R G+ L VD ++ G T+
Sbjct: 792 GCAPSKGPETLFAGHKLNDNEWHTVRVVRRGKSLQLSVDNVTVEGQMA-GAHTRLEFHNI 850
Query: 209 XXXGGVPDYNIVSPKVKIKSSFIGCIQKVLIN 240
G + + +S + S+FIG + ++ N
Sbjct: 851 ET-GIMTERRFISV---VPSNFIGHLSGLVFN 878
Score = 108 (43.1 bits), Expect = 5.0e-07, Sum P(3) = 5.0e-07
Identities = 48/188 (25%), Positives = 74/188 (39%)
Query: 109 DLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGA-ATLRSSNPISL 167
+L+ + +LLY D DF+ L L D + F L ATL+ P +
Sbjct: 57 ELSFSLRTNATRALLLYLDDGGDC--DFLELLLVDGRLRLRFTLSCAEPATLQLDTPAAD 114
Query: 168 GEWHKLRLTRTGRHAYLQVD-RFPSSQILSPGPFTQXXXXXXXXXGGVP-DYNIVS---P 222
WH + LTR R L VD S+++ S Q GG+P D + +
Sbjct: 115 DRWHMVLLTRDARRTALAVDGEVRSAEVRSKRREMQVASDLFV--GGIPPDVRLSALTLS 172
Query: 223 KVKIKSSFIGCIQKVLINNHELNILG-EAIQGVNVVNCAHPCITQPCGSGS-CVPLYDG- 279
VK + F G + + + +LG + ++G P PC +G C L G
Sbjct: 173 TVKYEPPFRGLLANLKLGERPPALLGSQGLRGAAADPLCAPA-RNPCANGGLCTVLAPGE 231
Query: 280 YKCVCTQS 287
C C+ +
Sbjct: 232 VGCDCSHT 239
Score = 80 (33.2 bits), Expect = 4.5e-15, Sum P(3) = 4.5e-15
Identities = 17/66 (25%), Positives = 31/66 (46%)
Query: 344 RIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTK-INNGVWHR 402
+ KT++ GL+L+ S DF+ + + GY H ++ K +N+ WH
Sbjct: 935 QFKTTAPDGLLLFN-SGNGNDFIVIELVKGYIHYVFDLGNGPSLMKGNSDKPVNDNQWHN 993
Query: 403 LTVHRN 408
+ V R+
Sbjct: 994 VVVSRD 999
Score = 77 (32.2 bits), Expect = 5.0e-07, Sum P(3) = 5.0e-07
Identities = 20/77 (25%), Positives = 37/77 (48%)
Query: 436 RLHRTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVEDIEELTRSKYHHSFKGWI 495
R+ R +Q I +D + + + L +D Y+GG + +L S ++F G +
Sbjct: 382 RVTRNLRQVTISVDGILTTTGYTQEDYTMLGSDDFFYIGGSPNTADLPGSPVSNNFMGCL 441
Query: 496 SNLILSNDYQVKLPLSR 512
+++ N+ KL LSR
Sbjct: 442 KDVVYKNN-DFKLELSR 457
Score = 65 (27.9 bits), Expect = 4.5e-15, Sum P(3) = 4.5e-15
Identities = 13/32 (40%), Positives = 16/32 (50%)
Query: 49 KTPCEHGGKC-ITTPGSSYCLCP-LGFTGDLC 78
+ PC +GG C + PG C C GF G C
Sbjct: 215 RNPCANGGLCTVLAPGEVGCDCSHTGFGGKFC 246
Score = 65 (27.9 bits), Expect = 5.0e-07, Sum P(3) = 5.0e-07
Identities = 19/74 (25%), Positives = 32/74 (43%)
Query: 341 IDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQT--KINNG 398
I + +T +GL+L TG +S D++ L + +G ++ K N+
Sbjct: 319 ITLAFRTLQRNGLMLHTG--KSADYVNLSLKSGAVWLVINLGSGAFEALVEPVNGKFNDN 376
Query: 399 VWHRLTVHRNFMVV 412
WH + V RN V
Sbjct: 377 AWHDVRVTRNLRQV 390
Score = 59 (25.8 bits), Expect = 1.7e-09, Sum P(4) = 1.7e-09
Identities = 11/50 (22%), Positives = 23/50 (46%)
Query: 359 SSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGVWHRLTVHRN 408
S+Q D+ A+ + +GY +++ K+N+G W + R+
Sbjct: 537 SAQRADYFAMELLDGYLYLLLDMGSGGIKLRASSRKVNDGEWCHVDFQRD 586
Score = 47 (21.6 bits), Expect = 1.7e-09, Sum P(4) = 1.7e-09
Identities = 12/40 (30%), Positives = 25/40 (62%)
Query: 439 RTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVED 478
R G++ I +++ S ++ G+ E L+ +S LY+GG+ +
Sbjct: 585 RDGRKGSISVNSR-STPFLATGESEILDLESELYLGGLPE 623
Score = 38 (18.4 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 11/29 (37%), Positives = 20/29 (68%)
Query: 11 DDWNTVRVFRHRWDAWIQLN-DGNKIKGR 38
++W+TVRV R R + +QL+ D ++G+
Sbjct: 811 NEWHTVRVVR-RGKS-LQLSVDNVTVEGQ 837
>RGD|1565194 [details] [associations]
symbol:Cntnap5b "contactin associated protein-like 5B"
species:10116 "Rattus norvegicus" [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR000421 InterPro:IPR000742 Pfam:PF00008 Pfam:PF00754
PROSITE:PS01285 PROSITE:PS01286 PROSITE:PS50022 PROSITE:PS50026
SMART:SM00181 SMART:SM00231 INTERPRO:IPR002181 GO:GO:0016021
GO:GO:0007165 GO:GO:0007155 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 InterPro:IPR008979 SUPFAM:SSF49785
InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025 SUPFAM:SSF56496
PROSITE:PS00514 PROSITE:PS51406 Pfam:PF02210 HOVERGEN:HBG057718
eggNOG:NOG291100 HOGENOM:HOG000230964 OrthoDB:EOG441Q9K CTD:241175
UniGene:Rn.202933 EMBL:AABR03084915 EMBL:AABR03084985
EMBL:AABR03085159 EMBL:AABR03085253 EMBL:AABR03085581
EMBL:AABR03085657 EMBL:AABR03085682 EMBL:AABR03085702
EMBL:AABR03086240 EMBL:AABR03086399 EMBL:AABR03086675
EMBL:AABR03086698 EMBL:AABR03086915 EMBL:AABR03087310 EMBL:BN000870
IPI:IPI00363278 RefSeq:NP_001041338.1 ProteinModelPortal:Q0V8T4
PRIDE:Q0V8T4 GeneID:301650 KEGG:rno:301650 UCSC:RGD:1565194
InParanoid:Q0V8T4 NextBio:649055 ArrayExpress:Q0V8T4
Genevestigator:Q0V8T4 Uniprot:Q0V8T4
Length = 1307
Score = 185 (70.2 bits), Expect = 5.6e-15, Sum P(2) = 5.6e-15
Identities = 82/330 (24%), Positives = 136/330 (41%)
Query: 92 SSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLND-RYVDFTF 150
+SYL + ++ +D++ FK +G+ + N G+ DF+ L L+ V F
Sbjct: 801 ASYLHFPTSHVEFS--IDISFFFKTTALSGVFIENL----GIKDFLRLELSSPSEVTFAI 854
Query: 151 DLGTGAATL--RSSNPISLGEWHKLRLTRTGRHAYLQVDRFPS--SQILSPGPFTQXXXX 206
D+G G L +S +P++ +WH ++ R + LQVD FP + G F Q
Sbjct: 855 DVGNGPTELLVQSPSPLNDNQWHYIQAERNLKETSLQVDNFPRIMRETTEKGHF-QLQLN 913
Query: 207 XXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLIN--NHELNILGEAIQGVNVVNCAHPCI 264
GG S + K F+GCI+ + +N N +L G GV C C
Sbjct: 914 SQMFVGGT------SSRQK---GFLGCIRSLHLNGQNIDLEERGMVTSGVRP-GCPGHCS 963
Query: 265 T--QPC-GSGSCVPLYDGYKCVCTQSCKESHLTEV-MCASFDHGASFLHYLDPEIIHSSG 320
+ C G CV ++ Y C CT+S E + + A FD S + S
Sbjct: 964 SYGNNCHNGGKCVEKHNSYSCDCTKSPYEGPFCQKEISALFDSTTSITYMFQEPYPVSKN 1023
Query: 321 LLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGI-HNGYAHVMY 379
++ D + E I + T+ + L+L+ S + FLAL + NG ++Y
Sbjct: 1024 TSTSSSAIYTD-TVLSKE-TILLSFVTAQAPTLLLYLNFS-TPSFLALLLSRNGSLQILY 1080
Query: 380 XXXXXXXXXXXXQTK-INNGVWHRLTVHRN 408
T+ + N H + ++R+
Sbjct: 1081 HLSKGESHMFTVSTENLANRRVHHVKMNRD 1110
Score = 134 (52.2 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 56/208 (26%), Positives = 91/208 (43%)
Query: 78 CQTRLDLQVPQFNGSSYLRYQGLGEQYLSLLDL-TIVFKAIEPNGILLYN-GHRADGVGD 135
C R D V F+G S L Y+ + +L D+ ++ FK+++ +G+LL+ G R GD
Sbjct: 175 CSYRSD--VADFDGHSSLLYRFNQKTMSTLKDMISLKFKSMQGDGVLLHGEGQR----GD 228
Query: 136 FIALYLNDRYVDFTFDLGTGAATLRSSNPIS-LG------EWHKLRLTRTGRHAYLQVDR 188
+I L L + + +L G A L S P + LG +WH + L R G+ VD
Sbjct: 229 YITLELQNGRLALYLNLDGGQARLSSIAPSAILGSLLDDQQWHSVLLERVGKQTNFTVDT 288
Query: 189 FPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILG 248
+ GG+P + P +K SF GCI+ + N +NI+
Sbjct: 289 -NTEHFQIKAETDALDIDYELSFGGIPIPS--KPGTFLKKSFHGCIENLYYNG--VNIID 343
Query: 249 EAIQGVNVVNCAHPCITQPCGSGSCVPL 276
A + + + + +T C VP+
Sbjct: 344 LAKRRKHQIYSGN--VTFSCSEPQIVPI 369
Score = 92 (37.4 bits), Expect = 5.6e-15, Sum P(2) = 5.6e-15
Identities = 16/37 (43%), Positives = 22/37 (59%)
Query: 43 LEDKCNKTPCEHGGKCITTPGSSYCLCP-LGFTGDLC 78
++D+C CEHGG C+ T + YC C G+TG C
Sbjct: 547 IKDRCLPNYCEHGGHCVQTWTTFYCNCSNTGYTGATC 583
Score = 70 (29.7 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 17/74 (22%), Positives = 35/74 (47%)
Query: 333 RITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQ 392
RI G ++ + +T + GL+L T S+S L L + G ++
Sbjct: 386 RIDG--LSVSFQFRTWNEDGLLLSTELSESSGTLLLILEGGTLRLLIKKVAGHGTEIITG 443
Query: 393 TKINNGVWHRLTVH 406
+ +N+G+WH ++++
Sbjct: 444 SGLNDGLWHFVSIN 457
Score = 43 (20.2 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 276 LYDGYKCVCTQSCKESHLTEVMCASFDH 303
LY + CT KE +E + +SF H
Sbjct: 1263 LYQHKQSHCTSQKKEKEYSENLDSSFRH 1290
>UNIPROTKB|E2RC00 [details] [associations]
symbol:NRXN2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007416 "synapse assembly" evidence=IEA] [GO:0007269
"neurotransmitter secretion" evidence=IEA] InterPro:IPR000742
InterPro:IPR027160 PROSITE:PS50026 SMART:SM00181 GO:GO:0016021
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025
Pfam:PF02210 InterPro:IPR003585 SMART:SM00294
GeneTree:ENSGT00560000076996 OMA:GGDCDFL PANTHER:PTHR10127:SF307
EMBL:AAEX03011644 Ensembl:ENSCAFT00000022782 Uniprot:E2RC00
Length = 1692
Score = 192 (72.6 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 86/328 (26%), Positives = 143/328 (43%)
Query: 92 SSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFD 151
SSYL L + Y S+ L FK P+G+LL+N +G DFI + L Y+ + FD
Sbjct: 906 SSYLALATL-QAYASM-HLFFQFKTTAPDGLLLFNS--GNG-NDFIVIELVKGYIHYVFD 960
Query: 152 LGTGAATLR--SSNPISLGEWHKLRLTRTGRHAY-LQVDRFPSSQILSPGPFTQXXXXXX 208
LG G + ++ S P++ +WH + ++R + + L++D +Q S G
Sbjct: 961 LGNGPSLMKGNSDKPVNDNQWHNVVVSRDPGNVHTLKIDSRTVTQH-SNGA-RNLDLKGE 1018
Query: 209 XXXGGVPDYNIVS--PK-VKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVN--CAHP- 262
GG+ N+ S PK V + F GC+ V +N +++ +A+ + V C P
Sbjct: 1019 LYIGGLSK-NMFSNLPKLVASRDGFQGCLASVDLNGRLPDLIADALHRIGQVERGCDGPS 1077
Query: 263 --CITQPCGS-GSCVPLYDGYKCVCTQS------CKESHLTEVMCASFDHGASFLHYLDP 313
C + C + G C+ +DG+ C CT + C + T + F G + + Y P
Sbjct: 1078 TTCTEESCANQGVCLQQWDGFTCDCTMTSYGGPVCNDPGTTYI----FGKGGALITYTWP 1133
Query: 314 EIIHSSGLLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNG 373
S + +L V F T + +R+ S+SGL G D+L L I G
Sbjct: 1134 PNDRPSTRMD---RLAVGFS-THQRSAVLVRV--DSASGL----G-----DYLQLHIDQG 1178
Query: 374 YAHVMYXXXXXXXXXXXXQTKINNGVWH 401
V++ +++G +H
Sbjct: 1179 TVGVIFNVGTDDITIDEPNAIVSDGKYH 1206
Score = 180 (68.4 bits), Expect = 6.6e-15, Sum P(3) = 6.6e-15
Identities = 77/290 (26%), Positives = 131/290 (45%)
Query: 110 LTIVFKAIEPNGILLYN-GHRAD-GVG--------DFIALYLNDRYVDFTFDLGTGAATL 159
+++ F+ EPNG+LL++ G RA G G D+ A+ L D Y+ D+G+G L
Sbjct: 497 ISLDFRTTEPNGLLLFSQGRRAGAGAGSHSSAQRADYFAMELLDGYLYLLLDMGSGGIKL 556
Query: 160 R-SSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYN 218
R SS ++ GEW + R GR + V+ S+ L+ G GG+P+
Sbjct: 557 RASSRKVNDGEWCHVDFQRDGRKGSISVNS-RSTPFLATGESEILDLESELYLGGLPEGG 615
Query: 219 IVS----PKV---KIKSSFIGCIQKVLIN--NHELNILGEAIQGVNVVN-CAHP----CI 264
V P+V +++ ++GC++ + I+ + +L L EA V + C+ C
Sbjct: 616 RVDLPLPPEVWTAALRAGYVGCVRDLFIDGRSRDLRGLAEAQGAVGITPFCSRETLKQCA 675
Query: 265 TQPCGSGS-CVPLYDGYKCVCTQSCKESHLTEVMCASFDHGASFLHYLDPEIIHSSGLLH 323
+ PC +G C ++ + C C + L V C + A+ L Y G ++
Sbjct: 676 SAPCRNGGICREGWNRFVCDCVGT---GFLGRV-C---EREATVLSY--------DGSMY 720
Query: 324 YKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNG 373
K L T E ++ +R + + GL++ T S +S D L L + G
Sbjct: 721 MKIMLPNAMH-TEAE-DVSLRFMSQRAYGLMMATTSRESADTLRLELDGG 768
Score = 143 (55.4 bits), Expect = 6.8e-11, Sum P(3) = 6.8e-11
Identities = 45/181 (24%), Positives = 82/181 (45%)
Query: 72 GFTGDLCQTRLDLQ--VPQFNGSSYLRYQGLGEQYLSLLD-LTIVFKAIEPNGILLYNGH 128
G GD+ Q + V F G+ + Y S D +T+ F+ ++ NG++L+ G
Sbjct: 268 GGAGDVHQPTKGKEEFVATFKGNEFFCYDLSHNPIQSSTDEITLAFRTLQRNGLMLHTGK 327
Query: 129 RADGVGDFIALYLNDRYVDFTFDLGTGA--ATLRSSN-PISLGEWHKLRLTRTGRHAYLQ 185
AD ++ L L V +LG+GA A + N + WH +R+TR R +
Sbjct: 328 SAD----YVNLSLKSGAVWLVINLGSGAFEALVEPVNGKFNDNAWHDVRVTRNLRQVTIS 383
Query: 186 VDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELN 245
VD ++ + +T GG P+ + P + ++F+GC++ V+ N++
Sbjct: 384 VDGILTTTGYTQEDYTMLGSDDFFYIGGSPNTADL-PGSPVSNNFMGCLKDVVYKNNDFK 442
Query: 246 I 246
+
Sbjct: 443 L 443
Score = 139 (54.0 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 42/159 (26%), Positives = 77/159 (48%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCPL-GFTGDLCQTRLDLQVPQFN-GSSYLRYQGL-GEQ 103
C + C + G C+ C C + + G +C + F G + + Y ++
Sbjct: 1080 CTEESCANQGVCLQQWDGFTCDCTMTSYGGPVCNDPGTTYI--FGKGGALITYTWPPNDR 1137
Query: 104 YLSLLD-LTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSS 162
+ +D L + F + + +L+ A G+GD++ L+++ V F++GT T+
Sbjct: 1138 PSTRMDRLAVGFSTHQRSAVLV-RVDSASGLGDYLQLHIDQGTVGVIFNVGTDDITIDEP 1196
Query: 163 NPI-SLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPF 200
N I S G++H +R TR+G +A LQVD +P ++ G F
Sbjct: 1197 NAIVSDGKYHVVRFTRSGGNATLQVDSWPVNERYPAGNF 1235
Score = 127 (49.8 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 49/212 (23%), Positives = 90/212 (42%)
Query: 39 SKECLEDKCNKTPCEHGGKCITTPGSSYCLCP-LGFTGDLCQTRLDLQVPQFNGSSYLRY 97
S+E L+ +C PC +GG C C C GF G +C+ + V ++GS Y++
Sbjct: 667 SRETLK-QCASAPCRNGGICREGWNRFVCDCVGTGFLGRVCER--EATVLSYDGSMYMKI 723
Query: 98 QGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDL----- 152
+ D+++ F + G+++ R D + L L+ + T +L
Sbjct: 724 MLPNAMHTEAEDVSLRFMSQRAYGLMMATTSRESA--DTLRLELDGGQMKLTVNLDCLRV 781
Query: 153 ----GTGAATLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXX 208
G TL + + ++ EWH +R+ R G+ L VD ++ G T+
Sbjct: 782 GCAPSKGPETLFAGHKLNDNEWHTVRVVRRGKSLQLSVDNVTVEGQMA-GAHTRLEFHNI 840
Query: 209 XXXGGVPDYNIVSPKVKIKSSFIGCIQKVLIN 240
G + + +S + S+FIG + ++ N
Sbjct: 841 ET-GIMTERRFISV---VPSNFIGHLSGLVFN 868
Score = 114 (45.2 bits), Expect = 1.7e-07, Sum P(3) = 1.7e-07
Identities = 55/214 (25%), Positives = 83/214 (38%)
Query: 109 DLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGA-ATLRSSNPISL 167
+L+ + +LLY D DF+ L L D + F L ATL+ P +
Sbjct: 57 ELSFSLRTNATRALLLYLDDGGDC--DFLELLLVDGRLRLRFTLSCAEPATLQLDTPAAD 114
Query: 168 GEWHKLRLTRTGRHAYLQVD-RFPSSQILSPGPFTQXXXXXXXXXGGVP-DYNIVS---P 222
WH + LTR R L VD S+++ S Q GG+P D + +
Sbjct: 115 DRWHMVLLTRDARRTALAVDGEVRSAEVRSKRREMQVASDLFV--GGIPPDVRLSALTLS 172
Query: 223 KVKIKSSFIGCIQKVLINNHELNILG-EAIQGVNVVNCAHPCITQPCGSGS-CVPLYDG- 279
VK + F G + + + +LG + ++G P PC +G C L G
Sbjct: 173 TVKYEPPFRGLLANLKLGERPPALLGSQGLRGAAADPLCAPA-RNPCANGGLCTVLAPGE 231
Query: 280 YKCVCTQS------C-KESHLTEVMCASFDHGAS 306
C C+ + C +E H EV F G +
Sbjct: 232 VGCDCSHTGFGGKFCSEEEHPMEVGSLLFSEGGA 265
Score = 80 (33.2 bits), Expect = 6.6e-15, Sum P(3) = 6.6e-15
Identities = 17/66 (25%), Positives = 31/66 (46%)
Query: 344 RIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTK-INNGVWHR 402
+ KT++ GL+L+ S DF+ + + GY H ++ K +N+ WH
Sbjct: 925 QFKTTAPDGLLLFN-SGNGNDFIVIELVKGYIHYVFDLGNGPSLMKGNSDKPVNDNQWHN 983
Query: 403 LTVHRN 408
+ V R+
Sbjct: 984 VVVSRD 989
Score = 77 (32.2 bits), Expect = 1.7e-07, Sum P(3) = 1.7e-07
Identities = 20/77 (25%), Positives = 37/77 (48%)
Query: 436 RLHRTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVEDIEELTRSKYHHSFKGWI 495
R+ R +Q I +D + + + L +D Y+GG + +L S ++F G +
Sbjct: 372 RVTRNLRQVTISVDGILTTTGYTQEDYTMLGSDDFFYIGGSPNTADLPGSPVSNNFMGCL 431
Query: 496 SNLILSNDYQVKLPLSR 512
+++ N+ KL LSR
Sbjct: 432 KDVVYKNN-DFKLELSR 447
Score = 65 (27.9 bits), Expect = 6.6e-15, Sum P(3) = 6.6e-15
Identities = 13/32 (40%), Positives = 16/32 (50%)
Query: 49 KTPCEHGGKC-ITTPGSSYCLCP-LGFTGDLC 78
+ PC +GG C + PG C C GF G C
Sbjct: 215 RNPCANGGLCTVLAPGEVGCDCSHTGFGGKFC 246
Score = 65 (27.9 bits), Expect = 1.7e-07, Sum P(3) = 1.7e-07
Identities = 19/74 (25%), Positives = 32/74 (43%)
Query: 341 IDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQT--KINNG 398
I + +T +GL+L TG +S D++ L + +G ++ K N+
Sbjct: 309 ITLAFRTLQRNGLMLHTG--KSADYVNLSLKSGAVWLVINLGSGAFEALVEPVNGKFNDN 366
Query: 399 VWHRLTVHRNFMVV 412
WH + V RN V
Sbjct: 367 AWHDVRVTRNLRQV 380
Score = 59 (25.8 bits), Expect = 2.7e-09, Sum P(4) = 2.7e-09
Identities = 11/50 (22%), Positives = 23/50 (46%)
Query: 359 SSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGVWHRLTVHRN 408
S+Q D+ A+ + +GY +++ K+N+G W + R+
Sbjct: 527 SAQRADYFAMELLDGYLYLLLDMGSGGIKLRASSRKVNDGEWCHVDFQRD 576
Score = 47 (21.6 bits), Expect = 2.7e-09, Sum P(4) = 2.7e-09
Identities = 12/40 (30%), Positives = 25/40 (62%)
Query: 439 RTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVED 478
R G++ I +++ S ++ G+ E L+ +S LY+GG+ +
Sbjct: 575 RDGRKGSISVNSR-STPFLATGESEILDLESELYLGGLPE 613
Score = 38 (18.4 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 11/29 (37%), Positives = 20/29 (68%)
Query: 11 DDWNTVRVFRHRWDAWIQLN-DGNKIKGR 38
++W+TVRV R R + +QL+ D ++G+
Sbjct: 801 NEWHTVRVVR-RGKS-LQLSVDNVTVEGQ 827
>UNIPROTKB|E1BT21 [details] [associations]
symbol:CRB1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005902 "microvillus"
evidence=IEA] [GO:0007009 "plasma membrane organization"
evidence=IEA] [GO:0042462 "eye photoreceptor cell development"
evidence=IEA] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005886
GO:GO:0007009 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 GO:GO:0005902 Pfam:PF02210
Pfam:PF12661 OMA:QYIRVWL GeneTree:ENSGT00690000101660
EMBL:AADN02033824 EMBL:AADN02033825 EMBL:AADN02033826
EMBL:AADN02033827 IPI:IPI00593999 ProteinModelPortal:E1BT21
Ensembl:ENSGALT00000003596 Uniprot:E1BT21
Length = 1378
Score = 166 (63.5 bits), Expect = 8.0e-15, Sum P(2) = 8.0e-15
Identities = 105/519 (20%), Positives = 196/519 (37%)
Query: 44 EDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTR-LDLQVPQFNGSSYLRYQGLGE 102
+D C PC++ G+C S +C C + G C + + + S Y +
Sbjct: 646 KDWCENHPCQNRGRCSNLWLSYHCDCYRPYAGPSCAAEYIPGRFGSEDSSGYAAFSVDAT 705
Query: 103 QYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSS 162
+ +L ++++ + + +G+LL + ++ +YL + L + L
Sbjct: 706 ENENL-NISMFVRTRKSSGLLLA---LRNSTSLYVRVYLEGGKLAM---LAPNSIKLLGK 758
Query: 163 NPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILS--PGPFTQXXXXXXXXXGGVPDYNIV 220
+PI+ G ++ + L ++ F SSQ L P GG+PD
Sbjct: 759 HPINDGNFYLITLKIEPN----MLELFQSSQYLGFISTPVLTTQSKDFLYVGGLPDNRET 814
Query: 221 SPKVKIKSSFIGCIQKVLINNHEL------NILGEAIQG--VNVVN-CA--HPCITQPCG 269
+ F GCIQ V +NN L N L I +NV C+ + C + PC
Sbjct: 815 D---RNGGYFKGCIQDVRVNNQPLEFFSLTNSLNSFINRTLINVTQGCSGDNLCKSSPCH 871
Query: 270 SGS-CVPLYDGYKCVCT-----QSCKESHLTEVMCASFDHGASFLHY----LDPEIIHS- 318
+G C ++D + C C ++C+E E+ + H L +
Sbjct: 872 NGGVCYSIWDDFTCTCPPNTAGKACEEVKWCELGPCPHEAQCKLAHQGFECLANAVFSGR 931
Query: 319 SGLLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNG-YAHV 377
S + Y+ ++ +T NI +T + ++L+ + + +F+ + IHN
Sbjct: 932 SSAIFYRSNGNIGRGLT----NIVFGFRTRDKNVILLY--AEKEPEFVIISIHNSKLVFQ 985
Query: 378 MYXXXXXXXXXXXXQTKINNGVWHRLTVHRNFMVVMHGSSHTR-SNKSSKIEFKCLSIQR 436
+ +++G WH++TV + H NK +
Sbjct: 986 LQSGNNFYMLTLTSSLTVSDGKWHQVTVSMVEPLSQFSRWHMNIDNKDAATSTTATGSLN 1045
Query: 437 LHRTGKQCLIRIDTDYSMQSISG--GKFEQLNTDSGLYVGGVEDIEELTRSKYHHSFKGW 494
R ++ I + D + ++ G G + SG+Y+ E+ + LT+ F
Sbjct: 1046 FLR--EETDIHL-ADKAFDNLDGLRGCMSTIEI-SGIYLSYFENADILTKKPQEEQFLKI 1101
Query: 495 ISNLILSNDYQVKLPLSRSQGSSCQLTCETLNTG-QVTC 532
+N +L+ Q S+ + TCE L T + TC
Sbjct: 1102 SANPVLTGCLQEDA--CSSEPCMHEGTCEDLYTSYRCTC 1138
Score = 147 (56.8 bits), Expect = 8.0e-12, Sum P(3) = 8.0e-12
Identities = 64/263 (24%), Positives = 106/263 (40%)
Query: 47 CNKTPCEHGGKCITTPGSSY----CLCPLGFTGDLCQTRLDLQVPQFNGSSYLRYQGLGE 102
C C++ G CI + + C+C G+TG C+T Q NG +L+ +
Sbjct: 419 CTDQQCQNNGICIPHLKNGHHGFSCICSPGYTGIHCETVTTFSF-QGNGFLWLKNPTTTK 477
Query: 103 QYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDL-GTGAATLRS 161
+ S ++ + F+ ++P L Y G + F+ L L + Y+ + + A L
Sbjct: 478 EESSY-NINLRFQTVQPTAFLFYRGEK----DTFVKLELLNGYLHLSVQVKNQPRALLHI 532
Query: 162 SNPISLGEWHKLRLTRTGRHAYLQV--DRFPSSQILSPGPFTQXX----XXXXXXXGGVP 215
S+ +S GEWH + +T R L + S + G +P
Sbjct: 533 SHNVSDGEWHSVEVT-LARAVTLNLLDSSCAESCVNKTSAMIDNDHVRLAFQSTFLGSLP 591
Query: 216 DYNIVSP-KVKIKS-----SFIGCIQKVLINNHELNIL----GEAIQGVNV-VNCAHP-- 262
NI S ++ I + SF+GC+Q + I +LN++ +NV C
Sbjct: 592 VGNISSSSQLNINNIHSTPSFVGCLQDIEI---DLNVITPENASPESSLNVEAGCRKKDW 648
Query: 263 CITQPCGS-GSCVPLYDGYKCVC 284
C PC + G C L+ Y C C
Sbjct: 649 CENHPCQNRGRCSNLWLSYHCDC 671
Score = 111 (44.1 bits), Expect = 8.0e-15, Sum P(2) = 8.0e-15
Identities = 18/39 (46%), Positives = 23/39 (58%)
Query: 45 DKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLD 83
D+C PC++G C P + C CP GF G LCQT +D
Sbjct: 200 DECQSRPCQNGATCRDAPAAFSCSCPPGFLGALCQTDVD 238
Score = 111 (44.1 bits), Expect = 8.0e-15, Sum P(2) = 8.0e-15
Identities = 20/48 (41%), Positives = 29/48 (60%)
Query: 38 RSKEC-LE-DKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLD 83
+ K C LE ++C PC +G C+ G YC+CPLG+TG C+ +D
Sbjct: 153 QGKHCDLEVNECVSDPCLNGATCLNLIGRYYCICPLGYTGVNCELEVD 200
Score = 107 (42.7 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
Identities = 22/58 (37%), Positives = 28/58 (48%)
Query: 37 GRSKECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLD--LQVPQFNGS 92
G + E C+ PCEHGG C+ CLC GFTG C+ +D P NG+
Sbjct: 78 GTTCEIAISMCDTNPCEHGGTCLDGLARPTCLCRTGFTGTRCEMDVDECSSEPCHNGA 135
Score = 83 (34.3 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 39/166 (23%), Positives = 67/166 (40%)
Query: 277 YDGYKCV-----CT-QSCKESHLTEVMCASFDHGASFLHYLDPEIIHSSGLLHYKFQ--- 327
Y G+ C CT Q C+ + + + HG S + IH + + FQ
Sbjct: 407 YGGWNCTEILRGCTDQQCQNNGICIPHLKNGHHGFSCICSPGYTGIHCETVTTFSFQGNG 466
Query: 328 -LHVDFRITGYE---FNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXX 383
L + T E +NI++R +T + + + G + F+ L + NGY H+
Sbjct: 467 FLWLKNPTTTKEESSYNINLRFQTVQPTAFLFYRGEKDT--FVKLELLNGYLHLSVQVKN 524
Query: 384 XXXXXXXXQTKINNGVWH--RLTVHRNFMVVMHGSSHTRS--NKSS 425
+++G WH +T+ R + + SS S NK+S
Sbjct: 525 QPRALLHISHNVSDGEWHSVEVTLARAVTLNLLDSSCAESCVNKTS 570
Score = 81 (33.6 bits), Expect = 8.0e-12, Sum P(3) = 8.0e-12
Identities = 15/35 (42%), Positives = 20/35 (57%)
Query: 38 RSKECLED--KCNKTPCEHGGKCITTPGSSYCLCP 70
R C ED +C+ PC++GG C PG+ C CP
Sbjct: 364 RGIHCDEDINECHTNPCQNGGICENFPGNYTCHCP 398
Score = 76 (31.8 bits), Expect = 3.4e-11, Sum P(2) = 3.4e-11
Identities = 12/42 (28%), Positives = 23/42 (54%)
Query: 45 DKCNKTPCEHGGKCITTPGS-SY-CLCPLGFTGDLCQTRLDL 84
D C+ PC C+++ G+ ++ C CP G+ G C+ + +
Sbjct: 46 DPCSSNPCLQNATCLSSAGNLNFTCECPDGYNGTTCEIAISM 87
Score = 68 (29.0 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 19/78 (24%), Positives = 33/78 (42%)
Query: 239 INNHELNILGEAIQGVNVVNCAHPCITQPCGSGS-CVPLYDGYKCVCTQS-----CKESH 292
IN++E I G+N C C +G+ C+ +GY C+C + C+
Sbjct: 1168 INSYEC-ICEPGYTGLNCEEDIDYCQGHQCANGATCIDGINGYSCLCAGNFTGKLCRYRR 1226
Query: 293 LTEVMCASFDHGASFLHY 310
L +C + D + +Y
Sbjct: 1227 LPYTVCGNEDRNLTCYNY 1244
Score = 66 (28.3 bits), Expect = 8.0e-12, Sum P(3) = 8.0e-12
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 263 CITQPC-GSGSCVPLYDGYKCVCTQSCKESH 292
C ++PC G+C LY Y+C C +H
Sbjct: 1116 CSSEPCMHEGTCEDLYTSYRCTCRPGWVGTH 1146
Score = 61 (26.5 bits), Expect = 2.6e-11, Sum P(3) = 2.6e-11
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 263 CITQPCGSGSCVPLYDGYKCVC 284
C + PC G+C + Y+C+C
Sbjct: 1154 CFSNPCIHGNCTDGINSYECIC 1175
Score = 59 (25.8 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 251 IQGVNVVNCAHPCITQPCGSGSCVPLYDG-YKCVCTQSCKE 290
I+G++ + C T PC +G + G Y C C + KE
Sbjct: 363 IRGIHCDEDINECHTNPCQNGGICENFPGNYTCHCPPADKE 403
Score = 58 (25.5 bits), Expect = 6.1e-07, Sum P(3) = 6.1e-07
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 263 CITQPCGSGS-CVPLYDGYKCVC 284
C++ PC +G+ C+ L Y C+C
Sbjct: 164 CVSDPCLNGATCLNLIGRYYCIC 186
Score = 56 (24.8 bits), Expect = 2.7e-09, Sum P(3) = 2.7e-09
Identities = 9/19 (47%), Positives = 10/19 (52%)
Query: 45 DKCNKTPCEHGGKCITTPG 63
D+C PC HG C PG
Sbjct: 238 DECASGPCLHGALCADRPG 256
Score = 46 (21.3 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 11/43 (25%), Positives = 15/43 (34%)
Query: 44 EDKCNKTPCEHGGKCITTPGSSYCLC---PLGFTGDLCQTRLD 83
+ +C C+ CIT C C L +LC D
Sbjct: 4 DSRCLSNSCQKNSTCITGHRDDICRCVDMSLDTMEELCNKTSD 46
Score = 42 (19.8 bits), Expect = 9.0e-06, Sum P(3) = 9.0e-06
Identities = 6/12 (50%), Positives = 8/12 (66%)
Query: 263 CITQPCGSGSCV 274
C + PC SG C+
Sbjct: 318 CSSAPCASGRCL 329
>UNIPROTKB|F1RQP6 [details] [associations]
symbol:NRXN2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007416 "synapse assembly" evidence=IEA] [GO:0007269
"neurotransmitter secretion" evidence=IEA] [GO:0005246 "calcium
channel regulator activity" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR000742 InterPro:IPR027160
PROSITE:PS50026 SMART:SM00181 GO:GO:0016021 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0007416
InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025 GO:GO:0007269
GO:GO:0005246 Pfam:PF02210 InterPro:IPR003585 SMART:SM00294
GeneTree:ENSGT00560000076996 OMA:GGDCDFL PANTHER:PTHR10127:SF307
EMBL:CU468547 EMBL:FP101995 Ensembl:ENSSSCT00000014237
Uniprot:F1RQP6
Length = 1696
Score = 191 (72.3 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 83/327 (25%), Positives = 141/327 (43%)
Query: 92 SSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFD 151
SSYL L + Y S+ L FK P+G+LL+N +G DFI + L Y+ + FD
Sbjct: 917 SSYLALATL-QAYASM-HLFFQFKTTAPDGLLLFNS--GNG-NDFIVIELVKGYIHYVFD 971
Query: 152 LGTGAATLR--SSNPISLGEWHKLRLTRTGRHAY-LQVDRFPSSQILSPGPFTQXXXXXX 208
LG G + ++ S P++ +WH + ++R + + L++D +Q S G
Sbjct: 972 LGNGPSLMKGNSDKPVNDNQWHNVVVSRDPGNVHTLKIDSRTVTQH-SNGA-RNLDLKGE 1029
Query: 209 XXXGGVPD--YNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVN--CAHP-- 262
GG+ +N + V + F GC+ V +N +++ +A+ + V C P
Sbjct: 1030 LYIGGLSKNMFNNLPKLVASRDGFQGCLASVDLNGRLPDLIADALHRIGQVERGCDGPST 1089
Query: 263 -CITQPCGS-GSCVPLYDGYKCVCTQS------CKESHLTEVMCASFDHGASFLHYLDPE 314
C + C + G C+ +DG+ C CT + C + T + F G + + Y P
Sbjct: 1090 TCTEESCANQGVCLQQWDGFTCDCTMTSYGGPVCNDPGTTYI----FGKGGALITYTWPP 1145
Query: 315 IIHSSGLLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGY 374
S + +L V F T + +R+ S+SGL G D+L L I G
Sbjct: 1146 NDRPSTRMD---RLAVGFS-THQRSAVLVRV--DSASGL----G-----DYLQLHIDQGT 1190
Query: 375 AHVMYXXXXXXXXXXXXQTKINNGVWH 401
V++ +++G +H
Sbjct: 1191 VGVIFNVGTDDITIDEPNAIVSDGKYH 1217
Score = 178 (67.7 bits), Expect = 1.1e-14, Sum P(3) = 1.1e-14
Identities = 76/290 (26%), Positives = 129/290 (44%)
Query: 110 LTIVFKAIEPNGILLYNGHRADGVG----------DFIALYLNDRYVDFTFDLGTGAATL 159
+++ F+ EPNG+LL++ R G G D+ A+ L D Y+ D+G+G L
Sbjct: 508 ISLDFRTTEPNGLLLFSQGRRAGAGASSHSTAQRADYFAMELLDGYLYLLLDMGSGGIKL 567
Query: 160 R-SSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYN 218
R SS ++ GEW + R GR + V+ S+ L+ G GG+P+
Sbjct: 568 RASSRKVNDGEWCHVDFQRDGRKGSISVNS-RSTPFLATGESEILDLESELYLGGLPEGG 626
Query: 219 IVS----PKV---KIKSSFIGCIQKVLIN--NHELNILGEAIQGVNVVN-CAHP----CI 264
V P+V +++ ++GC++ + I+ + +L L EA V V C+ C
Sbjct: 627 RVDLPLPPEVWTAALRAGYVGCVRDLFIDGRSRDLRGLAEAQGAVGVAPFCSRETLKQCA 686
Query: 265 TQPCGSGS-CVPLYDGYKCVCTQSCKESHLTEVMCASFDHGASFLHYLDPEIIHSSGLLH 323
+ PC +G C ++ + C C + L V C + A+ L Y G ++
Sbjct: 687 SAPCRNGGLCREGWNRFVCDCIGT---GFLGRV-C---EREATVLSY--------DGSMY 731
Query: 324 YKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNG 373
K L T E ++ +R + + GL++ T S +S D L L + G
Sbjct: 732 MKIMLPNAMH-TEAE-DVSLRFMSQRAYGLMMATTSRESADTLRLELDGG 779
Score = 139 (54.0 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 42/159 (26%), Positives = 77/159 (48%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCPL-GFTGDLCQTRLDLQVPQFN-GSSYLRYQGL-GEQ 103
C + C + G C+ C C + + G +C + F G + + Y ++
Sbjct: 1091 CTEESCANQGVCLQQWDGFTCDCTMTSYGGPVCNDPGTTYI--FGKGGALITYTWPPNDR 1148
Query: 104 YLSLLD-LTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSS 162
+ +D L + F + + +L+ A G+GD++ L+++ V F++GT T+
Sbjct: 1149 PSTRMDRLAVGFSTHQRSAVLV-RVDSASGLGDYLQLHIDQGTVGVIFNVGTDDITIDEP 1207
Query: 163 NPI-SLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPF 200
N I S G++H +R TR+G +A LQVD +P ++ G F
Sbjct: 1208 NAIVSDGKYHVVRFTRSGGNATLQVDSWPVNERYPAGNF 1246
Score = 128 (50.1 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 49/212 (23%), Positives = 90/212 (42%)
Query: 39 SKECLEDKCNKTPCEHGGKCITTPGSSYCLC-PLGFTGDLCQTRLDLQVPQFNGSSYLRY 97
S+E L+ +C PC +GG C C C GF G +C+ + V ++GS Y++
Sbjct: 678 SRETLK-QCASAPCRNGGLCREGWNRFVCDCIGTGFLGRVCER--EATVLSYDGSMYMKI 734
Query: 98 QGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDL----- 152
+ D+++ F + G+++ R D + L L+ + T +L
Sbjct: 735 MLPNAMHTEAEDVSLRFMSQRAYGLMMATTSRESA--DTLRLELDGGQMKLTVNLDCLRV 792
Query: 153 ----GTGAATLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXX 208
G TL + + ++ EWH +R+ R G+ L VD ++ G T+
Sbjct: 793 GCAPSKGPETLFAGHKLNDNEWHTVRVVRRGKSLQLSVDNVTVEGQMA-GAHTRLEFHNI 851
Query: 209 XXXGGVPDYNIVSPKVKIKSSFIGCIQKVLIN 240
G + + +S + S+FIG + ++ N
Sbjct: 852 ET-GIMTERRFISV---VPSNFIGHLSGLVFN 879
Score = 126 (49.4 bits), Expect = 4.5e-09, Sum P(3) = 4.5e-09
Identities = 47/189 (24%), Positives = 84/189 (44%)
Query: 72 GFTGDLCQTRLDLQ--VPQFNGSSYLRYQGLGEQYLSLLD-LTIVFKAIEPNGILLYNGH 128
G GD+ Q + V F G+ + Y S D +T+ F+ ++ NG++L+ G
Sbjct: 271 GGAGDVHQPTKGKEEFVATFKGNEFFCYDLSHNPIQSSTDEITLAFRTLQRNGLMLHTGK 330
Query: 129 RADGVGDFIALYLNDRYVDFTFDLGTGA--ATLRSSN-PISLGEWHKLRLTRTGR----- 180
AD ++ L L V +LG+GA A + N + WH +R+TR R
Sbjct: 331 SAD----YVNLSLKSGAVWLVINLGSGAFEALVEPVNGKFNDNAWHDVRVTRNLRQHAGI 386
Query: 181 -HAY--LQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKV 237
HA + VD ++ + +T GG P+ + P + ++F+GC++ V
Sbjct: 387 GHAMVTISVDGILTTTGYTQEDYTMLGSDDFFYIGGSPNTADL-PGSPVSNNFMGCLKDV 445
Query: 238 LINNHELNI 246
+ N++ +
Sbjct: 446 VYKNNDFKL 454
Score = 108 (43.1 bits), Expect = 9.0e-06, Sum P(3) = 9.0e-06
Identities = 47/188 (25%), Positives = 75/188 (39%)
Query: 109 DLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGA-ATLRSSNPISL 167
+L+ + +LLY D DF+ L L D + F L ATL+ P++
Sbjct: 50 ELSFSLRTNATRALLLYLDDGGDC--DFLELLLVDGRLRLRFTLSCAEPATLQLDTPVAD 107
Query: 168 GEWHKLRLTRTGRHAYLQVD-RFPSSQILSPGPFTQXXXXXXXXXGGVP-DYNIVS---P 222
WH + LTR R L VD ++++ S Q GG+P D + +
Sbjct: 108 DRWHMVLLTRDARRTALAVDGEARAAEVRSKRREMQVASDLFV--GGIPPDVRLSALTLS 165
Query: 223 KVKIKSSFIGCIQKVLINNHELNILG-EAIQGVNVVNCAHPCITQPCGSGS-CVPLYDG- 279
VK + F G + + + +LG + ++G P PC +G C L G
Sbjct: 166 TVKYEPPFRGLLANLKLGERPPALLGSQGLRGAAADPLCAPA-RNPCANGGLCTVLAPGE 224
Query: 280 YKCVCTQS 287
C C+ +
Sbjct: 225 VGCDCSHT 232
Score = 80 (33.2 bits), Expect = 1.1e-14, Sum P(3) = 1.1e-14
Identities = 17/66 (25%), Positives = 31/66 (46%)
Query: 344 RIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTK-INNGVWHR 402
+ KT++ GL+L+ S DF+ + + GY H ++ K +N+ WH
Sbjct: 936 QFKTTAPDGLLLFN-SGNGNDFIVIELVKGYIHYVFDLGNGPSLMKGNSDKPVNDNQWHN 994
Query: 403 LTVHRN 408
+ V R+
Sbjct: 995 VVVSRD 1000
Score = 67 (28.6 bits), Expect = 9.0e-06, Sum P(3) = 9.0e-06
Identities = 15/51 (29%), Positives = 27/51 (52%)
Query: 462 FEQLNTDSGLYVGGVEDIEELTRSKYHHSFKGWISNLILSNDYQVKLPLSR 512
+ L +D Y+GG + +L S ++F G + +++ N+ KL LSR
Sbjct: 409 YTMLGSDDFFYIGGSPNTADLPGSPVSNNFMGCLKDVVYKNN-DFKLELSR 458
Score = 65 (27.9 bits), Expect = 1.1e-14, Sum P(3) = 1.1e-14
Identities = 13/32 (40%), Positives = 16/32 (50%)
Query: 49 KTPCEHGGKC-ITTPGSSYCLCP-LGFTGDLC 78
+ PC +GG C + PG C C GF G C
Sbjct: 208 RNPCANGGLCTVLAPGEVGCDCSHTGFGGKFC 239
Score = 64 (27.6 bits), Expect = 9.0e-06, Sum P(3) = 9.0e-06
Identities = 18/70 (25%), Positives = 31/70 (44%)
Query: 341 IDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQT--KINNG 398
I + +T +GL+L TG +S D++ L + +G ++ K N+
Sbjct: 312 ITLAFRTLQRNGLMLHTG--KSADYVNLSLKSGAVWLVINLGSGAFEALVEPVNGKFNDN 369
Query: 399 VWHRLTVHRN 408
WH + V RN
Sbjct: 370 AWHDVRVTRN 379
Score = 58 (25.5 bits), Expect = 2.2e-07, Sum P(4) = 2.2e-07
Identities = 17/81 (20%), Positives = 37/81 (45%)
Query: 340 NIDMRIKTSSSSGLILWT-------GSS-----QSKDFLALGIHNGYAHVMYXXXXXXXX 387
+I + +T+ +GL+L++ G+S Q D+ A+ + +GY +++
Sbjct: 507 SISLDFRTTEPNGLLLFSQGRRAGAGASSHSTAQRADYFAMELLDGYLYLLLDMGSGGIK 566
Query: 388 XXXXQTKINNGVWHRLTVHRN 408
K+N+G W + R+
Sbjct: 567 LRASSRKVNDGEWCHVDFQRD 587
Score = 47 (21.6 bits), Expect = 2.2e-07, Sum P(4) = 2.2e-07
Identities = 12/40 (30%), Positives = 25/40 (62%)
Query: 439 RTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVED 478
R G++ I +++ S ++ G+ E L+ +S LY+GG+ +
Sbjct: 586 RDGRKGSISVNSR-STPFLATGESEILDLESELYLGGLPE 624
Score = 38 (18.4 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 11/29 (37%), Positives = 20/29 (68%)
Query: 11 DDWNTVRVFRHRWDAWIQLN-DGNKIKGR 38
++W+TVRV R R + +QL+ D ++G+
Sbjct: 812 NEWHTVRVVR-RGKS-LQLSVDNVTVEGQ 838
>UNIPROTKB|E1BFN9 [details] [associations]
symbol:NRXN2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007416 "synapse assembly" evidence=IEA] [GO:0007269
"neurotransmitter secretion" evidence=IEA] [GO:0005246 "calcium
channel regulator activity" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR000742 InterPro:IPR027160
PROSITE:PS50026 SMART:SM00181 GO:GO:0016021 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0007416
InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025 GO:GO:0007269
GO:GO:0005246 Pfam:PF02210 InterPro:IPR003585 SMART:SM00294
GeneTree:ENSGT00560000076996 KO:K07377 CTD:9379 OMA:GGDCDFL
PANTHER:PTHR10127:SF307 EMBL:DAAA02063538 EMBL:DAAA02063536
EMBL:DAAA02063537 IPI:IPI00690334 RefSeq:NP_001179851.1
UniGene:Bt.9366 ProteinModelPortal:E1BFN9
Ensembl:ENSBTAT00000000307 GeneID:537808 KEGG:bta:537808
NextBio:20877219 Uniprot:E1BFN9
Length = 1710
Score = 191 (72.3 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 83/327 (25%), Positives = 141/327 (43%)
Query: 92 SSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFD 151
SSYL L + Y S+ L FK P+G+LL+N +G DFI + L Y+ + FD
Sbjct: 924 SSYLALATL-QAYASM-HLFFQFKTTAPDGLLLFNS--GNG-NDFIVIELVKGYIHYVFD 978
Query: 152 LGTGAATLR--SSNPISLGEWHKLRLTRTGRHAY-LQVDRFPSSQILSPGPFTQXXXXXX 208
LG G + ++ S P++ +WH + ++R + + L++D +Q S G
Sbjct: 979 LGNGPSLMKGNSDKPVNDNQWHNVVVSRDPGNVHTLKIDSRTVTQH-SNGA-RNLDLKGE 1036
Query: 209 XXXGGVPD--YNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVN--CAHP-- 262
GG+ +N + V + F GC+ V +N +++ +A+ + V C P
Sbjct: 1037 LYIGGLSKNMFNNLPKLVASRDGFQGCLASVDLNGRLPDLIADALHRIGQVERGCDGPST 1096
Query: 263 -CITQPCGS-GSCVPLYDGYKCVCTQS------CKESHLTEVMCASFDHGASFLHYLDPE 314
C + C + G C+ +DG+ C CT + C + T + F G + + Y P
Sbjct: 1097 TCTEESCANQGVCLQQWDGFTCDCTMTSYGGPICNDPGTTYI----FGKGGALITYTWPP 1152
Query: 315 IIHSSGLLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGY 374
S + +L V F T + +R+ S+SGL G D+L L I G
Sbjct: 1153 NDRPSTRMD---RLAVGFS-THQRSAVLVRV--DSASGL----G-----DYLQLHIDQGT 1197
Query: 375 AHVMYXXXXXXXXXXXXQTKINNGVWH 401
V++ +++G +H
Sbjct: 1198 VGVIFNVGTDDITIDEPNAIVSDGKYH 1224
Score = 177 (67.4 bits), Expect = 1.5e-14, Sum P(3) = 1.5e-14
Identities = 78/291 (26%), Positives = 132/291 (45%)
Query: 110 LTIVFKAIEPNGILLYN-GHRADGVG----------DFIALYLNDRYVDFTFDLGTGAAT 158
+++ F+ EP+G+LL++ G RA GVG D+ A+ L D Y+ D+G+G
Sbjct: 515 ISLDFRTTEPSGLLLFSQGGRA-GVGPGSPSTAQRADYFAMELLDGYLYLLLDMGSGGIK 573
Query: 159 LR-SSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDY 217
LR SS ++ GEW + R GR + V+ S+ L+ G GG+P+
Sbjct: 574 LRASSRKVNDGEWCHVDFQRDGRKGSISVNS-RSTPFLATGESEILDLESELYLGGLPEG 632
Query: 218 NIVS----PKV---KIKSSFIGCIQKVLIN--NHELNILGEAIQGVNVVN-CAHP----C 263
V P+V +++ ++GC++ + I+ + +L L EA V V C+ C
Sbjct: 633 GRVDLPLPPEVWTAALRAGYVGCVRDLFIDGRSRDLRGLAEAQGAVGVAPFCSRETLKQC 692
Query: 264 ITQPC-GSGSCVPLYDGYKCVCTQSCKESHLTEVMCASFDHGASFLHYLDPEIIHSSGLL 322
+ PC G+C ++ + C C + L V C + A+ L Y G +
Sbjct: 693 ASAPCRNGGACREGWNRFVCDCVGT---GFLGRV-C---EREATVLSY--------DGSM 737
Query: 323 HYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNG 373
+ K L T E ++ +R + + GL++ T S +S D L L + G
Sbjct: 738 YMKIMLPNAMH-TEAE-DVSLRFMSQRAYGLMMATTSRESADTLRLELDGG 786
Score = 140 (54.3 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 42/159 (26%), Positives = 77/159 (48%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCPL-GFTGDLCQTRLDLQVPQFN-GSSYLRYQGL-GEQ 103
C + C + G C+ C C + + G +C + F G + + Y ++
Sbjct: 1098 CTEESCANQGVCLQQWDGFTCDCTMTSYGGPICNDPGTTYI--FGKGGALITYTWPPNDR 1155
Query: 104 YLSLLD-LTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSS 162
+ +D L + F + + +L+ A G+GD++ L+++ V F++GT T+
Sbjct: 1156 PSTRMDRLAVGFSTHQRSAVLV-RVDSASGLGDYLQLHIDQGTVGVIFNVGTDDITIDEP 1214
Query: 163 NPI-SLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPF 200
N I S G++H +R TR+G +A LQVD +P ++ G F
Sbjct: 1215 NAIVSDGKYHVVRFTRSGGNATLQVDSWPVNERYPAGNF 1253
Score = 129 (50.5 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 49/212 (23%), Positives = 90/212 (42%)
Query: 39 SKECLEDKCNKTPCEHGGKCITTPGSSYCLCP-LGFTGDLCQTRLDLQVPQFNGSSYLRY 97
S+E L+ +C PC +GG C C C GF G +C+ + V ++GS Y++
Sbjct: 685 SRETLK-QCASAPCRNGGACREGWNRFVCDCVGTGFLGRVCER--EATVLSYDGSMYMKI 741
Query: 98 QGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDL----- 152
+ D+++ F + G+++ R D + L L+ + T +L
Sbjct: 742 MLPNAMHTEAEDVSLRFMSQRAYGLMMATTSRESA--DTLRLELDGGQMKLTVNLDCLRV 799
Query: 153 ----GTGAATLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXX 208
G TL + + ++ EWH +R+ R G+ L VD ++ G T+
Sbjct: 800 GCAPSKGPETLFAGHKLNDNEWHTVRVVRRGKSLQLSVDNVTVEGQMA-GAHTRLEFHNI 858
Query: 209 XXXGGVPDYNIVSPKVKIKSSFIGCIQKVLIN 240
G + + +S + S+FIG + ++ N
Sbjct: 859 ET-GIMTERRFISV---VPSNFIGHLSGLVFN 886
Score = 115 (45.5 bits), Expect = 6.8e-08, Sum P(3) = 6.8e-08
Identities = 49/196 (25%), Positives = 85/196 (43%)
Query: 72 GFTGDLCQTRLDLQ--VPQFNGSSYLRYQGLGEQYLSLLD-LTIVFKAIEPNGILLYNGH 128
G GD+ Q + V F G+ + Y S D +T+ F+ ++ NG++L+ G
Sbjct: 271 GGAGDVHQPSKGKEEFVATFKGNEFFCYDLSHNPIQSSTDEITLAFRTLQRNGLMLHTGK 330
Query: 129 RADGVGDFIALYLNDRYVDFTFDLGTGA--ATLRSSN-PISLGEWHKLRLTRTGR----- 180
AD ++ L L V +LG+GA A + N + WH +R+TR R
Sbjct: 331 SAD----YVNLSLKSGAVWLVINLGSGAFEALVEPVNGKFNDNAWHDVRVTRNLRQHAGI 386
Query: 181 -HA------YL---QVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSPKVKIKSSF 230
HA YL VD ++ + +T GG P+ + P + ++F
Sbjct: 387 GHAMVNKLHYLVTISVDGILTTTGYTQEDYTMLGSDDFFYIGGSPNTADL-PGSPVSNNF 445
Query: 231 IGCIQKVLINNHELNI 246
+GC++ V+ N++ +
Sbjct: 446 MGCLKDVVYKNNDFKL 461
Score = 108 (43.1 bits), Expect = 1.9e-06, Sum P(3) = 1.9e-06
Identities = 47/188 (25%), Positives = 75/188 (39%)
Query: 109 DLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGA-ATLRSSNPISL 167
+L+ + +LLY D DF+ L L D + F L ATL+ P++
Sbjct: 50 ELSFSLRTNATRALLLYLDDGGDC--DFLELLLVDGRLRLRFTLSCAEPATLQLDTPVAD 107
Query: 168 GEWHKLRLTRTGRHAYLQVD-RFPSSQILSPGPFTQXXXXXXXXXGGVP-DYNIVS---P 222
WH + LTR R L VD ++++ S Q GG+P D + +
Sbjct: 108 DRWHMVLLTRDARRTALAVDGEARAAEVRSKRREMQVASDLFV--GGIPPDVRLSALTLS 165
Query: 223 KVKIKSSFIGCIQKVLINNHELNILG-EAIQGVNVVNCAHPCITQPCGSGS-CVPLYDG- 279
VK + F G + + + +LG + ++G P PC +G C L G
Sbjct: 166 TVKYEPPFRGLLANLKLGERPPALLGSQGLRGAAADPLCAPA-RNPCANGGLCTVLAPGE 224
Query: 280 YKCVCTQS 287
C C+ +
Sbjct: 225 VGCDCSHT 232
Score = 80 (33.2 bits), Expect = 1.5e-14, Sum P(3) = 1.5e-14
Identities = 17/66 (25%), Positives = 31/66 (46%)
Query: 344 RIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTK-INNGVWHR 402
+ KT++ GL+L+ S DF+ + + GY H ++ K +N+ WH
Sbjct: 943 QFKTTAPDGLLLFN-SGNGNDFIVIELVKGYIHYVFDLGNGPSLMKGNSDKPVNDNQWHN 1001
Query: 403 LTVHRN 408
+ V R+
Sbjct: 1002 VVVSRD 1007
Score = 71 (30.1 bits), Expect = 1.9e-06, Sum P(3) = 1.9e-06
Identities = 23/86 (26%), Positives = 36/86 (41%)
Query: 341 IDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQT--KINNG 398
I + +T +GL+L TG +S D++ L + +G ++ K N+
Sbjct: 312 ITLAFRTLQRNGLMLHTG--KSADYVNLSLKSGAVWLVINLGSGAFEALVEPVNGKFNDN 369
Query: 399 VWHRLTVHRNFMVVMH-GSSHTRSNK 423
WH + V RN H G H NK
Sbjct: 370 AWHDVRVTRNLR--QHAGIGHAMVNK 393
Score = 67 (28.6 bits), Expect = 1.9e-06, Sum P(3) = 1.9e-06
Identities = 15/51 (29%), Positives = 27/51 (52%)
Query: 462 FEQLNTDSGLYVGGVEDIEELTRSKYHHSFKGWISNLILSNDYQVKLPLSR 512
+ L +D Y+GG + +L S ++F G + +++ N+ KL LSR
Sbjct: 416 YTMLGSDDFFYIGGSPNTADLPGSPVSNNFMGCLKDVVYKNN-DFKLELSR 465
Score = 65 (27.9 bits), Expect = 1.5e-14, Sum P(3) = 1.5e-14
Identities = 13/32 (40%), Positives = 16/32 (50%)
Query: 49 KTPCEHGGKC-ITTPGSSYCLCP-LGFTGDLC 78
+ PC +GG C + PG C C GF G C
Sbjct: 208 RNPCANGGLCTVLAPGEVGCDCSHTGFGGKFC 239
Score = 61 (26.5 bits), Expect = 1.6e-06, Sum P(4) = 1.6e-06
Identities = 18/81 (22%), Positives = 37/81 (45%)
Query: 340 NIDMRIKTSSSSGLILWT---------GS---SQSKDFLALGIHNGYAHVMYXXXXXXXX 387
+I + +T+ SGL+L++ GS +Q D+ A+ + +GY +++
Sbjct: 514 SISLDFRTTEPSGLLLFSQGGRAGVGPGSPSTAQRADYFAMELLDGYLYLLLDMGSGGIK 573
Query: 388 XXXXQTKINNGVWHRLTVHRN 408
K+N+G W + R+
Sbjct: 574 LRASSRKVNDGEWCHVDFQRD 594
Score = 47 (21.6 bits), Expect = 1.6e-06, Sum P(4) = 1.6e-06
Identities = 12/40 (30%), Positives = 25/40 (62%)
Query: 439 RTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVED 478
R G++ I +++ S ++ G+ E L+ +S LY+GG+ +
Sbjct: 593 RDGRKGSISVNSR-STPFLATGESEILDLESELYLGGLPE 631
Score = 38 (18.4 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 11/29 (37%), Positives = 20/29 (68%)
Query: 11 DDWNTVRVFRHRWDAWIQLN-DGNKIKGR 38
++W+TVRV R R + +QL+ D ++G+
Sbjct: 819 NEWHTVRVVR-RGKS-LQLSVDNVTVEGQ 845
>UNIPROTKB|Q9UHC6 [details] [associations]
symbol:CNTNAP2 "Contactin-associated protein-like 2"
species:9606 "Homo sapiens" [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0031175 "neuron projection development"
evidence=IEA] [GO:0071205 "protein localization to juxtaparanode
region of axon" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=NAS] [GO:0019226 "transmission of nerve impulse"
evidence=NAS] [GO:0008038 "neuron recognition" evidence=NAS]
[GO:0021987 "cerebral cortex development" evidence=IEP] [GO:0043025
"neuronal cell body" evidence=ISS] [GO:0030425 "dendrite"
evidence=ISS] [GO:0071625 "vocalization behavior" evidence=IMP]
[GO:0021756 "striatum development" evidence=IEP] [GO:0021794
"thalamus development" evidence=IEP] [GO:0007610 "behavior"
evidence=IMP] [GO:0016020 "membrane" evidence=IDA] [GO:0030673
"axolemma" evidence=IDA] [GO:0009986 "cell surface" evidence=IDA]
[GO:0005769 "early endosome" evidence=IDA] [GO:0019899 "enzyme
binding" evidence=IPI] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0043204 "perikaryon" evidence=ISS] [GO:0030424 "axon"
evidence=ISS] [GO:0071109 "superior temporal gyrus development"
evidence=IEP] [GO:0007420 "brain development" evidence=TAS]
[GO:0008076 "voltage-gated potassium channel complex" evidence=IDA]
[GO:0045163 "clustering of voltage-gated potassium channels"
evidence=ISS] [GO:0021761 "limbic system development" evidence=IEP]
[GO:0044224 "juxtaparanode region of axon" evidence=ISS]
[GO:0034613 "cellular protein localization" evidence=ISS]
InterPro:IPR000421 InterPro:IPR000742 Pfam:PF00008 Pfam:PF00754
PROSITE:PS01285 PROSITE:PS01286 PROSITE:PS50022 PROSITE:PS50026
SMART:SM00181 SMART:SM00231 INTERPRO:IPR002181 GO:GO:0005794
GO:GO:0007165 GO:GO:0009986 GO:GO:0034613 GO:GO:0030425
GO:GO:0043204 GO:GO:0007155 GO:GO:0030673 GO:GO:0008076
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0019226 PROSITE:PS01186
InterPro:IPR008979 SUPFAM:SSF49785 InterPro:IPR001791 SMART:SM00282
PROSITE:PS50025 GO:GO:0031175 GO:GO:0005769 SUPFAM:SSF56496
PROSITE:PS00514 PROSITE:PS51406 EMBL:CH471146 GO:GO:0008038
Orphanet:106 GO:GO:0021756 Pfam:PF02210 InterPro:IPR003585
SMART:SM00294 HOVERGEN:HBG057718 GO:GO:0044224 GO:GO:0045163
eggNOG:NOG291100 HOGENOM:HOG000230964 EMBL:AF193613 EMBL:AF319045
EMBL:AF318292 EMBL:AF318298 EMBL:AB020675 EMBL:CR933671
EMBL:BC093780 EMBL:BC113373 IPI:IPI00029343 IPI:IPI00646209
RefSeq:NP_054860.1 UniGene:Hs.655684 ProteinModelPortal:Q9UHC6
SMR:Q9UHC6 IntAct:Q9UHC6 MINT:MINT-241211 STRING:Q9UHC6
PhosphoSite:Q9UHC6 DMDM:17433089 PaxDb:Q9UHC6 PRIDE:Q9UHC6
Ensembl:ENST00000361727 GeneID:26047 KEGG:hsa:26047 UCSC:uc003weu.2
UCSC:uc003wev.2 CTD:26047 GeneCards:GC07P145863 HGNC:HGNC:13830
HPA:HPA002739 MIM:604569 MIM:610042 MIM:612100 neXtProt:NX_Q9UHC6
Orphanet:163681 Orphanet:221150 PharmGKB:PA26692 InParanoid:Q9UHC6
KO:K07380 OMA:TSQKCDE OrthoDB:EOG4RV2QH ChiTaRS:CNTNAP2
GenomeRNAi:26047 NextBio:47891 ArrayExpress:Q9UHC6 Bgee:Q9UHC6
CleanEx:HS_CNTNAP2 Genevestigator:Q9UHC6 GO:GO:0021761
GO:GO:0071205 GO:GO:0071109 GO:GO:0021794 GO:GO:0071625
Uniprot:Q9UHC6
Length = 1331
Score = 186 (70.5 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14
Identities = 63/230 (27%), Positives = 97/230 (42%)
Query: 90 NGSSYLRYQGL-GEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRY-VD 147
N SSYL + GE + D++ FK + P G+ L N G DFI L L V
Sbjct: 805 NPSSYLHFSTFQGE---TSADISFYFKTLTPWGVFLENM----GKEDFIKLELKSATEVS 857
Query: 148 FTFDLGTGAATL--RSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGP-FTQXX 204
F+FD+G G + RS P++ +WH++ R + A LQVDR P +P T+
Sbjct: 858 FSFDVGNGPVEIVVRSPTPLNDDQWHRVTAERNVKQASLQVDRLPQQIRKAPTEGHTRLE 917
Query: 205 XXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEA-IQGVNVVNCAHPC 263
GG + F+GCI+ + +N L++ A + + C+ C
Sbjct: 918 LYSQLFVGGAGG----------QQGFLGCIRSLRMNGVTLDLEERAKVTSGFISGCSGHC 967
Query: 264 ITQP--C-GSGSCVPLYDGYKCVCTQSCKESHLTEVMCASFDHGASFLHY 310
+ C G C+ Y GY C C+ + + +F +L Y
Sbjct: 968 TSYGTNCENGGKCLERYHGYSCDCSNTAYDGTFCNKDVGAFFEEGMWLRY 1017
Score = 180 (68.4 bits), Expect = 3.6e-10, Sum P(2) = 3.6e-10
Identities = 60/246 (24%), Positives = 111/246 (45%)
Query: 89 FNGSSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDF 148
FN +SYL G Q L ++ F+ PNG+L+++ H AD +G+ + + L + V
Sbjct: 378 FNATSYLEVPGRLNQ--DLFSVSFQFRTWNPNGLLVFS-HFADNLGN-VEIDLTESKVGV 433
Query: 149 TFDLGTGAAT---LRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXX 205
++ + + S + ++ G+WH++R A L +D +S + + P
Sbjct: 434 HINITQTKMSQIDISSGSGLNDGQWHEVRFLAKENFAILTIDGDEASAVRTNSPLQVKTG 493
Query: 206 XXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEA------IQGVNVVNC 259
G + N S V ++ SF GC+Q + +++ +N+ A V++ C
Sbjct: 494 EKYFFGGFLNQMNNSSHSV-LQPSFQGCMQLIQVDDQLVNLYEVAQRKPGSFANVSIDMC 552
Query: 260 A--HPCITQPCG-SGSCVPLYDGYKCVCTQS------CKESHLTEVMCASFDH-GASFLH 309
A C+ C G C +D +KC C ++ C S + E C ++ H G + +
Sbjct: 553 AIIDRCVPNHCEHGGKCSQTWDSFKCTCDETGYSGATCHNS-IYEPSCEAYKHLGQTSNY 611
Query: 310 Y-LDPE 314
Y +DP+
Sbjct: 612 YWIDPD 617
Score = 122 (48.0 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 44/189 (23%), Positives = 79/189 (41%)
Query: 86 VPQFNGSSYLRYQGLGEQYLSLLD-LTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDR 144
V F+G L Y+ ++ +L D + + FK E G++L H GD+I L L
Sbjct: 187 VINFDGHVVLPYRFRNKKMKTLKDVIALNFKTSESEGVIL---HGEGQQGDYITLELKKA 243
Query: 145 YVDFTFDLGT-------GAATLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSP 197
+ + +LG+ G ++ + + + WH + + R GR L +DR +
Sbjct: 244 KLVLSLNLGSNQLGPIYGHTSVMTGSLLDDHHWHSVVIERQGRSINLTLDR-SMQHFRTN 302
Query: 198 GPFTQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILG--EAIQGVN 255
G F GG+P P + +F GC++ + N + L + ++ N
Sbjct: 303 GEFDYLDLDYEITFGGIPFSG--KPSSSSRKNFKGCMESINYNGVNITDLARRKKLEPSN 360
Query: 256 VVNCAHPCI 264
V N + C+
Sbjct: 361 VGNLSFSCV 369
Score = 85 (35.0 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14
Identities = 16/39 (41%), Positives = 20/39 (51%)
Query: 45 DKCNKTPCEHGGKCITTPGSSYCLCP-LGFTGDLCQTRL 82
D+C CEHGGKC T S C C G++G C +
Sbjct: 556 DRCVPNHCEHGGKCSQTWDSFKCTCDETGYSGATCHNSI 594
Score = 55 (24.4 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 18/108 (16%), Positives = 45/108 (41%)
Query: 328 LHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYA--HVMYXXXXXX 385
L V R+ F++ + +T + +GL++++ + + + + + H+
Sbjct: 384 LEVPGRLNQDLFSVSFQFRTWNPNGLLVFSHFADNLGNVEIDLTESKVGVHINITQTKMS 443
Query: 386 XXXXXXQTKINNGVWH--RLTVHRNFMVV-MHGSSHTRSNKSSKIEFK 430
+ +N+G WH R NF ++ + G + +S ++ K
Sbjct: 444 QIDISSGSGLNDGQWHEVRFLAKENFAILTIDGDEASAVRTNSPLQVK 491
Score = 51 (23.0 bits), Expect = 3.6e-10, Sum P(2) = 3.6e-10
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 393 TKINNGVWHRLTVHRN 408
T +N+ WHR+T RN
Sbjct: 875 TPLNDDQWHRVTAERN 890
>ZFIN|ZDB-GENE-070206-5 [details] [associations]
symbol:nrxn2a "neurexin 2a" species:7955 "Danio
rerio" [GO:0007268 "synaptic transmission" evidence=IEA]
[GO:0007416 "synapse assembly" evidence=IEA] [GO:0004872 "receptor
activity" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR000742
InterPro:IPR027149 PROSITE:PS50026 SMART:SM00181
ZFIN:ZDB-GENE-070206-5 GO:GO:0016021 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025 Pfam:PF02210
InterPro:IPR003585 SMART:SM00294 GeneTree:ENSGT00560000076996
PANTHER:PTHR10127:SF405 EMBL:AL845282 EMBL:AL929386 EMBL:BX255886
EMBL:BX927322 EMBL:CR339042 EMBL:CR376834 EMBL:CR405687
EMBL:CT027649 IPI:IPI00828998 Ensembl:ENSDART00000087657
ArrayExpress:E9QCJ3 Bgee:E9QCJ3 Uniprot:E9QCJ3
Length = 1670
Score = 209 (78.6 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14
Identities = 93/401 (23%), Positives = 168/401 (41%)
Query: 90 NGSSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFT 149
N +SY+ L + Y S+ L FK P+G++L+N DG DFI + L Y+ +
Sbjct: 913 NRASYVALSTL-QAYASM-HLFFQFKTTSPDGLILFNS--GDG-SDFIVIELVKGYIHYV 967
Query: 150 FDLGTGAATLR--SSNPISLGEWHKLRLTRTGRHAY-LQVDRFPSSQILSPGPFTQXXXX 206
FDLG G + ++ S P++ +WH + ++R + + L++D +Q S G
Sbjct: 968 FDLGNGPSLMKGNSDKPLNDNQWHNVMVSRDDSNVHTLKIDSRTVTQH-SNGARNLDLKG 1026
Query: 207 XXXXXG-GVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVN--C-AHP 262
G G YN + + + + GC+ V +N +++ +A+ V V C A P
Sbjct: 1027 ELYIGGVGKSMYNSLPKLIASRDGYQGCLASVDLNGRLSDLIADALHRVGQVERGCEAGP 1086
Query: 263 ---CITQPCGS-GSCVPLYDGYKCVCTQSCKESHLTEVMCASFDHGASFLHYLDPEIIHS 318
C C + G C+ ++G+ C CT + L C+ D G +++ +I
Sbjct: 1087 GTTCTEDSCSNQGVCLQQWEGFTCDCTMTTYGGPL----CS--DPGTTYIFGRGGALITY 1140
Query: 319 SGLLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSK-DFLALGIHNGYAHV 377
+ + + D G+ T S +++ SSQ D+L L I G V
Sbjct: 1141 TWAPNDRPSTRADRLAVGFS--------TQQSDAILVQVESSQGLGDYLQLHIEQGKVGV 1192
Query: 378 MYXXXXXXXXXXXXQTKINNGVWHRLTVHR---NFMVVMHGSSHTRSNKSSKIEFKCLSI 434
++ +N+G +H + R N + + S I+ + L+I
Sbjct: 1193 IFNVGTDDITIDEPAVTVNDGKYHVVRFTRSGGNATLQVDNQPVIERFPSGNIDNERLAI 1252
Query: 435 QRLHRTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGG 475
R R + L R+ ++ + G + N+ + + VGG
Sbjct: 1253 AR-QRIPYR-LGRVVDEWLLDK--GRQLTIFNSQAAIKVGG 1289
Score = 153 (58.9 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 77/329 (23%), Positives = 134/329 (40%)
Query: 114 FKAIEPNGILLYNGHRADGVGD------FIALYLNDRYVDFTFDLGTGAATLRSSNP-IS 166
F+ EPNG+LL++ R G D F A+ L D ++ D+G+G+ ++ N ++
Sbjct: 512 FRTTEPNGLLLFSHGRPQGSKDHRPRVDFFAMELLDGFLHLLMDMGSGSIKIKVGNKKVN 571
Query: 167 LGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXX-GGVPDYN---IVSP 222
GEW + R GR + V+ S S ++ GG+P+ + + P
Sbjct: 572 DGEWCHVDFQREGRKGSISVNG--RSLPFSTNEGSEILDLDGEMYLGGLPENSGDLSLPP 629
Query: 223 KV---KIKSSFIGCIQKVLINNH--ELNILGEAIQGVNVVN-CAHP----CITQPC-GSG 271
+V +++ F+GC++ + ++ +L L E V + C C ++PC G
Sbjct: 630 EVWTARLRLGFVGCVRDLFVDGRSKDLRRLAELQSAPGVSSFCTRETHRRCSSEPCVHGG 689
Query: 272 SCVPLYDGYKCVCTQSCKESHLTEVMCA--SFDHGASFLHYLDPEIIHSSGLLHYKFQLH 329
C ++ + C CT + E+ A S+D G+ FL L P HS
Sbjct: 690 RCREGWNRHVCDCTGTGYMGPNCEMESAVLSYD-GSMFLKVLMPHAAHSEA--------- 739
Query: 330 VDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXX 389
E ++ +R + + GL++ T S +S D L L + G +
Sbjct: 740 --------E-DVSLRFMSQRAYGLLMATTSKESADTLRLELDGGRVKLTVNLDCIGIDCN 790
Query: 390 XXQT-----------KINNGVWHRLTVHR 407
T K+N+ WH + V R
Sbjct: 791 LNSTSKGPETLFAGHKLNDNEWHSVKVVR 819
Score = 129 (50.5 bits), Expect = 0.00024, P = 0.00024
Identities = 52/218 (23%), Positives = 94/218 (43%)
Query: 37 GRSKECLED---KCNKTPCEHGGKCITTPGSSYCLCP-LGFTGDLCQTRLDLQVPQFNGS 92
G S C + +C+ PC HGG+C C C G+ G C+ ++ V ++GS
Sbjct: 667 GVSSFCTRETHRRCSSEPCVHGGRCREGWNRHVCDCTGTGYMGPNCE--MESAVLSYDGS 724
Query: 93 SYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHR--ADGV-----GDFIALYLNDRY 145
+L+ + D+++ F + G+L+ + AD + G + L +N
Sbjct: 725 MFLKVLMPHAAHSEAEDVSLRFMSQRAYGLLMATTSKESADTLRLELDGGRVKLTVNLDC 784
Query: 146 VDFTFDLGT---GAATLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQ 202
+ +L + G TL + + ++ EWH +++ R G+ L VD +S G TQ
Sbjct: 785 IGIDCNLNSTSKGPETLFAGHKLNDNEWHSVKVVRRGKSLQLSVDNVTVEGQMS-GAHTQ 843
Query: 203 XXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLIN 240
G + + +S + S+FIG +Q + N
Sbjct: 844 LEFHHIET-GIMTERRFISV---MPSNFIGHLQGLSFN 877
Score = 109 (43.4 bits), Expect = 3.6e-05, Sum P(4) = 3.6e-05
Identities = 43/180 (23%), Positives = 79/180 (43%)
Query: 86 VPQFNGSSYLRYQGLGEQYLSLLD-LTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDR 144
V F G+ + Y + S D +T+ F+ ++ NG+LL+ G AD ++ L L
Sbjct: 280 VATFKGNEFFSYDLSQKPIQSSTDEITLSFRTLQRNGLLLHTGKSAD----YVNLSLKSG 335
Query: 145 YVDFTFDLGTGA--ATLRSSN-PISLGEWHKLRLTRTGRHA------------YL---QV 186
V +LG+GA A + S+ + WH +R++R R Y+ V
Sbjct: 336 AVCLVINLGSGAFEALVEPSDGKFNDNAWHAVRVSRNLRQRAGVGLPTVNKLHYMVTISV 395
Query: 187 DRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNI 246
D ++ + +T GG P+ + P + ++F+GC++ V+ N+E +
Sbjct: 396 DGLLTTTGYTQEDYTMLGSDDFFYVGGSPNTADL-PGSPVSNNFMGCLKDVVYTNNEFRL 454
Score = 106 (42.4 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 52/198 (26%), Positives = 79/198 (39%)
Query: 109 DLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGA-ATLRSSNPISL 167
+L+ K I+LY G DF+ L +ND + F + G A+L IS
Sbjct: 51 ELSFTMKTNISKAIVLYLDD--GGNCDFLELLINDGRLQLRFAIHCGEPASLHMETHISD 108
Query: 168 GEWHKLRLTRTGRHAYLQVDRFPSSQILS-PGPFTQXXXXXXXXXGGVP-DYNI---VSP 222
WH++ LTR R L +D S++ + GG+P D + S
Sbjct: 109 ERWHRVLLTRNYRETMLVMDG--ESKVAEVKSKRREMMVASDLYVGGIPPDVRLSALTSS 166
Query: 223 KVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNCAHPCITQ-PCGSGS-CVPLYDGY 280
VK + F G I + + +L QGV + + C Q PC +G C
Sbjct: 167 TVKYEPPFRGLIANLKLGETAPALLDS--QGVKN-DLDYLCTKQNPCSNGGRCSIQGSEV 223
Query: 281 KCVCTQS-CKESHLTEVM 297
C C+ + K + TEV+
Sbjct: 224 LCDCSNTGYKGKYCTEVL 241
Score = 67 (28.6 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 18/70 (25%), Positives = 32/70 (45%)
Query: 341 IDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQT--KINNG 398
I + +T +GL+L TG +S D++ L + +G ++ + K N+
Sbjct: 305 ITLSFRTLQRNGLLLHTG--KSADYVNLSLKSGAVCLVINLGSGAFEALVEPSDGKFNDN 362
Query: 399 VWHRLTVHRN 408
WH + V RN
Sbjct: 363 AWHAVRVSRN 372
Score = 63 (27.2 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14
Identities = 14/41 (34%), Positives = 18/41 (43%)
Query: 40 KECLEDKCNK-TPCEHGGKCITTPGSSYCLCP-LGFTGDLC 78
K L+ C K PC +GG+C C C G+ G C
Sbjct: 197 KNDLDYLCTKQNPCSNGGRCSIQGSEVLCDCSNTGYKGKYC 237
Score = 63 (27.2 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 14/50 (28%), Positives = 28/50 (56%)
Query: 462 FEQLNTDSGLYVGGVEDIEELTRSKYHHSFKGWISNLILSNDYQVKLPLS 511
+ L +D YVGG + +L S ++F G + +++ +N+ + +L LS
Sbjct: 409 YTMLGSDDFFYVGGSPNTADLPGSPVSNNFMGCLKDVVYTNN-EFRLELS 457
Score = 63 (27.2 bits), Expect = 3.6e-05, Sum P(4) = 3.6e-05
Identities = 18/76 (23%), Positives = 35/76 (46%)
Query: 340 NIDMRIKTSSSSGLILWT-GSSQ-SKD------FLALGIHNGYAHVMYXXXXXXXXXXXX 391
++ +T+ +GL+L++ G Q SKD F A+ + +G+ H++
Sbjct: 507 SVSFDFRTTEPNGLLLFSHGRPQGSKDHRPRVDFFAMELLDGFLHLLMDMGSGSIKIKVG 566
Query: 392 QTKINNGVWHRLTVHR 407
K+N+G W + R
Sbjct: 567 NKKVNDGEWCHVDFQR 582
Score = 39 (18.8 bits), Expect = 3.6e-05, Sum P(4) = 3.6e-05
Identities = 24/96 (25%), Positives = 42/96 (43%)
Query: 439 RTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVE----DIE---ELTRSKYHHSF 491
R G++ I ++ S + G E L+ D +Y+GG+ D+ E+ ++ F
Sbjct: 582 REGRKGSISVNGRSLPFSTNEGS-EILDLDGEMYLGGLPENSGDLSLPPEVWTARLRLGF 640
Query: 492 KGWISNLIL---SNDYQVKLPLSRSQGSSCQLTCET 524
G + +L + S D + L + G S T ET
Sbjct: 641 VGCVRDLFVDGRSKDLRRLAELQSAPGVSSFCTRET 676
>UNIPROTKB|F1NLP0 [details] [associations]
symbol:FAT4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0007156 "homophilic cell
adhesion" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR002126 InterPro:IPR015919 InterPro:IPR018097
InterPro:IPR020894 Pfam:PF00008 Pfam:PF00028 Pfam:PF07645
PRINTS:PR00205 PROSITE:PS00232 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS50268 SMART:SM00112 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 GO:GO:0016021 GO:GO:0005886 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 InterPro:IPR001791 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 GO:GO:0007156 SUPFAM:SSF49313 Gene3D:2.60.40.60
GeneTree:ENSGT00700000104207 Pfam:PF02210 OMA:GKMCESS
EMBL:AADN02009217 EMBL:AADN02009218 EMBL:AADN02009219
EMBL:AADN02009220 IPI:IPI00603180 Ensembl:ENSGALT00000019298
ArrayExpress:F1NLP0 Uniprot:F1NLP0
Length = 4964
Score = 230 (86.0 bits), Expect = 3.0e-14, Sum P(2) = 3.0e-14
Identities = 90/396 (22%), Positives = 156/396 (39%)
Query: 37 GRSKECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQFNGSSYLR 96
G++ + + C PC +GG C + YC CP G G+ C+ L F SY+
Sbjct: 3912 GKTCDSTVNYCECNPCFNGGSCQSGLEGYYCHCPFGVFGNHCE----LNSYGFEELSYME 3967
Query: 97 YQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGV-GDFIALYLNDRYVDFTFDLGTG 155
+ + + I F I+ N ++LYN G +F+AL + + + F+++LG+G
Sbjct: 3968 FPSMDPNNNYIY---IKFATIKRNALMLYNYDNQTGERAEFLALEIIEGRLRFSYNLGSG 4024
Query: 156 AATLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXX------ 209
L ++ +S G++H + R G A L VD Q PG T
Sbjct: 4025 TYKLTTTKKVSDGQFHTVIARRAGMAASLTVDSCSEDQ--EPGYCTVSNVAVSTDWTLDV 4082
Query: 210 -----XXGGVPDYN-IVSPKVKIKS-SFIGCIQKVLINNHELN-ILGEAIQGVNVVNCAH 261
GG+ I+ + +++S F+GCI + +N L A QG+ + C
Sbjct: 4083 QPNRLTVGGIRSVEPILQRRGQVESHDFVGCIMEFAVNGRPLEPSQALAAQGI-LDQCPR 4141
Query: 262 ---PCITQPCG-SGSCVPLYDGYKCVCTQSCKESHLTEVMCASFDHGASFLHYLDPEIIH 317
C T PC G+C + +C C H + + A LD H
Sbjct: 4142 LEGACTTSPCQHGGTCTDHWSWQQCQCKDGLTGDHCEKYITADTALSLEGKGRLD---YH 4198
Query: 318 SSGLLHYKFQLHVDFR-ITGYEFNID---MRIKTSSSSGLILWTGSSQSKDFLALGIHNG 373
S ++ + R + N+D ++ +T S +G++ +S +F + I G
Sbjct: 4199 MSPNKKREYMMRHSARGASPGPLNVDSLEVKFRTRSENGILFHI--QESSNFTTVKIRAG 4256
Query: 374 YAHVMYXXXXXXXXXXXX-QTKINNGVWHRLTVHRN 408
H + + +G WH + + +N
Sbjct: 4257 KVHYISDAGIAGKVERNIPEVYTADGQWHSVRIEKN 4292
Score = 174 (66.3 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 70/279 (25%), Positives = 102/279 (36%)
Query: 43 LEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQT--------------RLDLQVPQ 88
LE C +PC+HGG C C C G TGD C+ RLD +
Sbjct: 4142 LEGACTTSPCQHGGTCTDHWSWQQCQCKDGLTGDHCEKYITADTALSLEGKGRLDYHMSP 4201
Query: 89 FNGSSYL-RYQGLGEQY--LSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRY 145
Y+ R+ G L++ L + F+ NGIL H + +F + +
Sbjct: 4202 NKKREYMMRHSARGASPGPLNVDSLEVKFRTRSENGILF---HIQES-SNFTTVKIRAGK 4257
Query: 146 VDFTFDLGTGAATLRSSNPISL--GEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQX 203
V + D G R+ + G+WH +R+ + G L VD+ IL
Sbjct: 4258 VHYISDAGIAGKVERNIPEVYTADGQWHSVRIEKNGSTTVLSVDKTHKRDILHVTQDFGG 4317
Query: 204 XXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKV--------LINNHELNILGEAIQGVN 255
GG+P N P + F GCI + H L L + V
Sbjct: 4318 LNVLTISLGGIPP-N--QPFKSTVAGFDGCISYIKYGGESLPFAGKHSLATLSKTDPSVK 4374
Query: 256 VVNCAHP--CITQPC-GSGSCVPLYDGYKCVCTQSCKES 291
+ C P C + PC G C+ + Y+CV +C S
Sbjct: 4375 M-GCRGPNVCASSPCWGELMCINQWYTYQCVPPGACASS 4412
Score = 50 (22.7 bits), Expect = 3.0e-14, Sum P(2) = 3.0e-14
Identities = 6/15 (40%), Positives = 12/15 (80%)
Query: 45 DKCNKTPCEHGGKCI 59
+ C ++PC++GG C+
Sbjct: 3784 NSCLQSPCQNGGSCM 3798
>UNIPROTKB|Q8WYK1 [details] [associations]
symbol:CNTNAP5 "Contactin-associated protein-like 5"
species:9606 "Homo sapiens" [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR000421 InterPro:IPR000742 Pfam:PF00754 PROSITE:PS01285
PROSITE:PS01286 PROSITE:PS50022 PROSITE:PS50026 SMART:SM00181
SMART:SM00231 INTERPRO:IPR002181 GO:GO:0016021 GO:GO:0007165
GO:GO:0007155 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 EMBL:CH471103
PROSITE:PS01186 InterPro:IPR008979 SUPFAM:SSF49785
InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025 SUPFAM:SSF56496
PROSITE:PS00514 PROSITE:PS51406 Pfam:PF02210 HOVERGEN:HBG057718
eggNOG:NOG291100 CTD:129684 EMBL:AB077881 EMBL:AC019105
EMBL:AC019159 EMBL:AC074362 EMBL:AC079154 EMBL:AC097715
EMBL:AC104648 EMBL:AK056528 IPI:IPI00292300 RefSeq:NP_570129.1
UniGene:Hs.660653 HSSP:P01132 ProteinModelPortal:Q8WYK1 SMR:Q8WYK1
STRING:Q8WYK1 PhosphoSite:Q8WYK1 DMDM:74716461 PaxDb:Q8WYK1
PRIDE:Q8WYK1 DNASU:129684 Ensembl:ENST00000431078 GeneID:129684
KEGG:hsa:129684 UCSC:uc002tno.3 GeneCards:GC02P124879
HGNC:HGNC:18748 MIM:610519 neXtProt:NX_Q8WYK1 PharmGKB:PA134898715
InParanoid:Q8WYK1 OMA:FANRRMH GenomeRNAi:129684 NextBio:82625
Bgee:Q8WYK1 CleanEx:HS_CNTNAP5 Genevestigator:Q8WYK1 Uniprot:Q8WYK1
Length = 1306
Score = 190 (71.9 bits), Expect = 3.6e-14, Sum P(2) = 3.6e-14
Identities = 86/360 (23%), Positives = 145/360 (40%)
Query: 89 FNGSSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLND-RYVD 147
+ +SYL + ++ + D++ FK +G+ L N G+ DFI L ++ +
Sbjct: 796 YTEASYLHFPTFHAEFSA--DISFFFKTTALSGVFLENL----GIKDFIRLEISSPSEIT 849
Query: 148 FTFDLGTGAATLRSSNPISLGE--WHKLRLTRTGRHAYLQVDRFPSS--QILSPGPFTQX 203
F D+G G L +P L + WH +R R + LQVD P S + G F +
Sbjct: 850 FAIDVGNGPVELVVQSPSLLNDNQWHYVRAERNLKETSLQVDNLPRSTRETSEEGHF-RL 908
Query: 204 XXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEA--IQGVNVVNCAH 261
GG S + K F+GCI+ + +N ++++ A GV C
Sbjct: 909 QLNSQLFVGGT------SSRQK---GFLGCIRSLHLNGQKMDLEERAKVTSGVRP-GCPG 958
Query: 262 PCITQP--C-GSGSCVPLYDGYKCVCTQSCKESHLTEV-MCASFDHGASFLHYLDPEIIH 317
C + C G CV ++GY C CT S E + + A F+ G S +
Sbjct: 959 HCSSYGSICHNGGKCVEKHNGYLCDCTNSPYEGPFCKKEVSAVFEAGTSVTYMFQEPYPV 1018
Query: 318 SSGLLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGI-HNGYAH 376
+ + ++ D + + NI + T+ + L+L+ SS S+DF+ + + NG
Sbjct: 1019 TKNISLSSSAIYTDSAPS--KENIALSFVTTQAPSLLLFINSS-SQDFVVVLLCKNGSLQ 1075
Query: 377 VMYXXXXXXXXXXXXQT-KINNGVWHRLTVHRN---FMVVMHGSSHTRSNKSSKIEFKCL 432
V Y N H L ++R + M N S ++EF+ +
Sbjct: 1076 VRYHLNKEETHVFTIDADNFANRRMHHLKINREGRELTIQMDQQLRLSYNFSPEVEFRVI 1135
Score = 135 (52.6 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 54/209 (25%), Positives = 91/209 (43%)
Query: 78 CQTRLDLQVPQFNGSSYLRYQGLGEQYLSLLD--LTIVFKAIEPNGILLYN-GHRADGVG 134
C + D V F+G S L Y+ ++ +S L +++ FK+++ +G+L + G R G
Sbjct: 174 CSYKSD--VADFDGRSSLLYR-FNQKLMSTLKDVISLKFKSMQGDGVLFHGEGQR----G 226
Query: 135 DFIALYLNDRYVDFTFDLGTGAATLRSSNP-ISLGE------WHKLRLTRTGRHAYLQVD 187
D I L L + +LG A L SS P +LG WH + + R G+ VD
Sbjct: 227 DHITLELQKGRLALHLNLGDSKARLSSSLPSATLGSLLDDQHWHSVLIERVGKQVNFTVD 286
Query: 188 RFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNIL 247
+ + + G GG+P P +K +F GCI+ + N +NI+
Sbjct: 287 KH-TQHFRTKGETDALDIDYELSFGGIPVPG--KPGTFLKKNFHGCIENLYYNG--VNII 341
Query: 248 GEAIQGVNVVNCAHPCITQPCGSGSCVPL 276
A + + + + +T C VP+
Sbjct: 342 DLAKRRKHQIYTGN--VTFSCSEPQIVPI 368
Score = 79 (32.9 bits), Expect = 3.6e-14, Sum P(2) = 3.6e-14
Identities = 14/41 (34%), Positives = 21/41 (51%)
Query: 43 LEDKCNKTPCEHGGKCITTPGSSYCLCP-LGFTGDLCQTRL 82
++D+C CEHGG C + + YC C +TG C +
Sbjct: 546 IKDRCLPNYCEHGGSCSQSWTTFYCNCSDTSYTGATCHNSI 586
Score = 71 (30.1 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 13/67 (19%), Positives = 31/67 (46%)
Query: 340 NIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGV 399
++ + +T + GL+L T S+ L L + G ++ + +N+G+
Sbjct: 390 SVSFQFRTWNKDGLLLSTELSEGSGTLLLSLEGGILRLVIQKMTERVAEILTGSNLNDGL 449
Query: 400 WHRLTVH 406
WH ++++
Sbjct: 450 WHSVSIN 456
>MGI|MGI:1914047 [details] [associations]
symbol:Cntnap2 "contactin associated protein-like 2"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005769 "early endosome" evidence=ISO]
[GO:0005794 "Golgi apparatus" evidence=ISO] [GO:0007155 "cell
adhesion" evidence=TAS] [GO:0007610 "behavior" evidence=ISO]
[GO:0008038 "neuron recognition" evidence=TAS] [GO:0008076
"voltage-gated potassium channel complex" evidence=ISO;IDA]
[GO:0009986 "cell surface" evidence=ISO] [GO:0016020 "membrane"
evidence=ISO] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0019899 "enzyme binding" evidence=ISO] [GO:0030673 "axolemma"
evidence=ISO] [GO:0031175 "neuron projection development"
evidence=IGI] [GO:0034613 "cellular protein localization"
evidence=IMP] [GO:0044224 "juxtaparanode region of axon"
evidence=IDA] [GO:0045163 "clustering of voltage-gated potassium
channels" evidence=IMP] [GO:0071205 "protein localization to
juxtaparanode region of axon" evidence=IMP] [GO:0071625
"vocalization behavior" evidence=ISO] InterPro:IPR000421
InterPro:IPR000742 Pfam:PF00008 Pfam:PF00754 PROSITE:PS01285
PROSITE:PS01286 PROSITE:PS50022 PROSITE:PS50026 SMART:SM00181
SMART:SM00231 MGI:MGI:1914047 INTERPRO:IPR002181 GO:GO:0016021
GO:GO:0005794 GO:GO:0007165 GO:GO:0009986 GO:GO:0030425
GO:GO:0043204 GO:GO:0007155 GO:GO:0030673 GO:GO:0019899
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186
InterPro:IPR008979 SUPFAM:SSF49785 InterPro:IPR001791 SMART:SM00282
PROSITE:PS50025 GO:GO:0031175 GO:GO:0005769 SUPFAM:SSF56496
PROSITE:PS00514 PROSITE:PS51406 GO:GO:0008038 Pfam:PF02210
InterPro:IPR003585 SMART:SM00294 HOVERGEN:HBG057718 GO:GO:0044224
GO:GO:0045163 eggNOG:NOG291100 HOGENOM:HOG000230964
GeneTree:ENSGT00560000076804 CTD:26047 KO:K07380 OrthoDB:EOG4RV2QH
ChiTaRS:CNTNAP2 GO:GO:0021761 GO:GO:0071205 EMBL:AK017341
EMBL:AK013139 EMBL:AK129232 EMBL:BC029826 EMBL:BC064467
IPI:IPI00420554 IPI:IPI00467267 RefSeq:NP_001004357.2
RefSeq:NP_080047.1 UniGene:Mm.440084 ProteinModelPortal:Q9CPW0
SMR:Q9CPW0 STRING:Q9CPW0 PhosphoSite:Q9CPW0 PaxDb:Q9CPW0
PRIDE:Q9CPW0 Ensembl:ENSMUST00000060839 GeneID:66797 KEGG:mmu:66797
UCSC:uc009bst.2 InParanoid:Q9CPW0 NextBio:322675 Bgee:Q9CPW0
CleanEx:MM_CNTNAP2 Genevestigator:Q9CPW0
GermOnline:ENSMUSG00000039419 Uniprot:Q9CPW0
Length = 1332
Score = 184 (69.8 bits), Expect = 4.0e-14, Sum P(2) = 4.0e-14
Identities = 63/230 (27%), Positives = 97/230 (42%)
Query: 90 NGSSYLRYQGL-GEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRY-VD 147
N SSYL + GE + D++ FK + P G+ L N G DFI L L V
Sbjct: 805 NPSSYLHFSTFQGE---TSADISFYFKTLIPRGVFLENL----GNTDFIKLELKSATEVS 857
Query: 148 FTFDLGTGAATL--RSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGP-FTQXX 204
F+FD+G G + RS +P++ +WH++ R + A LQVDR P +P T+
Sbjct: 858 FSFDVGNGPVEIVVRSPSPLNDDQWHRVTAERNVKQASLQVDRLPQQIRKAPTEGHTRLE 917
Query: 205 XXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEA-IQGVNVVNCAHPC 263
GG + F+GCI+ + +N L++ A + C+ C
Sbjct: 918 LYSQLFVGGAGG----------QQGFLGCIRSLRMNGVTLDLEERAKVTSGFKSGCSGHC 967
Query: 264 ITQP--C-GSGSCVPLYDGYKCVCTQSCKESHLTEVMCASFDHGASFLHY 310
+ C G C+ Y GY C C+ + + +F +L Y
Sbjct: 968 TSYGANCENGGKCIEKYHGYSCDCSNTAYDGTFCNKDVGAFFEEGMWLRY 1017
Score = 175 (66.7 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 60/246 (24%), Positives = 110/246 (44%)
Query: 89 FNGSSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDF 148
FN +SYL G Q L ++ F+ P+G+LL++ H AD +G+ + + L + V
Sbjct: 378 FNATSYLEVPGRLNQ--DLFSVSFQFRTWNPSGLLLFS-HFADNLGN-VEIDLVESKVGV 433
Query: 149 TFD---LGTGAATLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXX 205
+ T + S + ++ G+WH++R A L +D +S + + P Q
Sbjct: 434 HINNTQTKTSQIDISSGSGLNDGQWHEVRFLAKENFAVLTIDGDEASAVRTNSPL-QVKT 492
Query: 206 XXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEA------IQGVNVVNC 259
GG ++ + ++ SF GC+Q + +++ +N+ A V + C
Sbjct: 493 GEKYFFGGFLNHMNNASYSALQPSFQGCMQLIQVDDQLVNLYEVAQRKPGSFANVTIDMC 552
Query: 260 A--HPCITQPCG-SGSCVPLYDGYKCVCTQS------CKESHLTEVMCASFDH-GASFLH 309
A C+ C G C +D +KC C ++ C S + E C ++ H G + +
Sbjct: 553 AIIDRCVPNHCEHGGKCSQTWDSFKCTCDETGYSGATCHNS-IYEPSCEAYKHLGQTSNY 611
Query: 310 Y-LDPE 314
Y +DP+
Sbjct: 612 YWIDPD 617
Score = 123 (48.4 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 45/189 (23%), Positives = 78/189 (41%)
Query: 86 VPQFNGSSYLRYQGLGEQYLSLLD-LTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDR 144
V F+G L Y+ ++ +L D + + FK E G+LL H GD+I L L
Sbjct: 187 VINFDGHGVLPYRFRNKKMKTLKDVIALKFKTSESEGVLL---HGEGQQGDYITLELKKA 243
Query: 145 YVDFTFDLGT-------GAATLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSP 197
+ + +LG+ G ++ S + + WH + + R GR L +DR +
Sbjct: 244 KLVLSLNLGSNQLGPIYGHTSVTSGSLLDDHHWHSVLIERQGRSINLTLDR-SMQHFRTN 302
Query: 198 GPFTQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILG--EAIQGVN 255
G F GG+P P + +F GC++ + N + L + + N
Sbjct: 303 GEFDYLDLDYEITFGGIPFSG--KPSSSNRKNFKGCMESINYNGVNITDLARRKKLGPSN 360
Query: 256 VVNCAHPCI 264
+ N + C+
Sbjct: 361 MGNLSFSCV 369
Score = 85 (35.0 bits), Expect = 4.0e-14, Sum P(2) = 4.0e-14
Identities = 16/39 (41%), Positives = 20/39 (51%)
Query: 45 DKCNKTPCEHGGKCITTPGSSYCLCP-LGFTGDLCQTRL 82
D+C CEHGGKC T S C C G++G C +
Sbjct: 556 DRCVPNHCEHGGKCSQTWDSFKCTCDETGYSGATCHNSI 594
Score = 61 (26.5 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 21/108 (19%), Positives = 45/108 (41%)
Query: 328 LHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYA--HVMYXXXXXX 385
L V R+ F++ + +T + SGL+L++ + + + + + H+
Sbjct: 384 LEVPGRLNQDLFSVSFQFRTWNPSGLLLFSHFADNLGNVEIDLVESKVGVHINNTQTKTS 443
Query: 386 XXXXXXQTKINNGVWH--RLTVHRNFMVV-MHGSSHTRSNKSSKIEFK 430
+ +N+G WH R NF V+ + G + +S ++ K
Sbjct: 444 QIDISSGSGLNDGQWHEVRFLAKENFAVLTIDGDEASAVRTNSPLQVK 491
Score = 48 (22.0 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 27/105 (25%), Positives = 44/105 (41%)
Query: 395 INNGVWHRLTVHRNFMVVMHGSSHTRSNKSSKIEFKCLSIQRLHRTGKQCLIRIDTDYSM 454
+N+ WHR+T RN K + ++ L Q++ + + R++ YS
Sbjct: 877 LNDDQWHRVTAERNV-------------KQASLQVDRLP-QQIRKAPTEGHTRLEL-YSQ 921
Query: 455 QSISGGKFEQ--LNTDSGLYVGGVE-DIEELTRSKYHHSFKGWIS 496
+ G +Q L L + GV D+EE R+K FK S
Sbjct: 922 LFVGGAGGQQGFLGCIRSLRMNGVTLDLEE--RAKVTSGFKSGCS 964
>UNIPROTKB|B1AMA2 [details] [associations]
symbol:CNTNAP3 "Contactin-associated protein-like 3"
species:9606 "Homo sapiens" [GO:0007155 "cell adhesion"
evidence=IEA] InterPro:IPR000421 InterPro:IPR000742 Pfam:PF00754
PROSITE:PS01286 PROSITE:PS50022 PROSITE:PS50026 SMART:SM00181
INTERPRO:IPR002181 GO:GO:0007165 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
InterPro:IPR008979 SUPFAM:SSF49785 InterPro:IPR001791 SMART:SM00282
PROSITE:PS50025 Gene3D:3.90.215.10 InterPro:IPR014716 SMART:SM00186
SUPFAM:SSF56496 PROSITE:PS51406 Pfam:PF02210 UniGene:Hs.521495
UniGene:Hs.604441 HOVERGEN:HBG057718 HOGENOM:HOG000230964
EMBL:AL162501 EMBL:AL353729 UniGene:Hs.128474 HGNC:HGNC:13834
IPI:IPI00889519 SMR:B1AMA2 Ensembl:ENST00000358144 Uniprot:B1AMA2
Length = 1039
Score = 184 (69.8 bits), Expect = 4.4e-14, Sum P(2) = 4.4e-14
Identities = 90/362 (24%), Positives = 150/362 (41%)
Query: 64 SSYCLCPLGFTGDLCQTRLDLQVPQFNG-SSYLRYQGLGEQYLSLLDLTIVFKAIEPNGI 122
++Y L PL GD Q+ + FN +SYL + + + D+ FK +G+
Sbjct: 688 AAYTLGPLLCRGD--QSFWNSA--SFNTETSYLHFPAFHGELTA--DVCFFFKTTVSSGV 741
Query: 123 LLYNGHRADGVGDFIALYLN-DRYVDFTFDLGTGAA--TLRSSNPISLGEWHKLRLTRTG 179
+ N G+ DFI + L V F+FD+G G T++S P + +WH +R R
Sbjct: 742 FMENL----GITDFIRIELRAPTEVTFSFDVGNGPCEVTVQSPTPFNDNQWHHVRAERNV 797
Query: 180 RHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLI 239
+ A LQVD+ P Q + P P + + + F+GCI+ + +
Sbjct: 798 KGASLQVDQLP--QKMQPAPADGHVRLQ------LNSQLFIGGTATRQRGFLGCIRSLQL 849
Query: 240 NNHELNILGEAIQGVNVV-NCAHPCITQP--CGSGS-CVPLYDGYKCVCTQSCKESHL-T 294
N L++ A V CA C T C +G C G C C S + +
Sbjct: 850 NGVALDLEERATVTPGVEPGCAGHCSTYGHLCRNGGRCREKRRGVTCDCAFSAYDGPFCS 909
Query: 295 EVMCASFDHGASFLHYLDPEIIHSSGLLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLI 354
+ A F G+S ++ S LH D +T E I + +T+ + L+
Sbjct: 910 NEISAYFATGSSMTYHFQEHYTLSENSSSLVSSLHRDVTLTR-EM-ITLSFRTTRTPSLL 967
Query: 355 LWTGSSQSKDFLALGI-HNGYAHVMYXXXXXXXXXXXXQTKIN--NGVWHRLTVHRNFMV 411
L+ SS +++L++ + +NG + Y N +G H++ ++R V
Sbjct: 968 LYV-SSFYEEYLSVILANNGSLQIRYKLDRHQNPDAFTFDFKNMADGQLHQVKINREEAV 1026
Query: 412 VM 413
VM
Sbjct: 1027 VM 1028
Score = 82 (33.9 bits), Expect = 4.4e-14, Sum P(2) = 4.4e-14
Identities = 15/41 (36%), Positives = 24/41 (58%)
Query: 43 LEDKCNKTPCEHGGKCITTPGSSYCLC-PLGFTGDLCQTRL 82
+ D+C + CEHGG+C + + C C G+TG+ C + L
Sbjct: 459 ITDRCLPSYCEHGGECSQSWDTFSCDCLGTGYTGETCHSSL 499
Score = 40 (19.1 bits), Expect = 9.8e-10, Sum P(2) = 9.8e-10
Identities = 10/23 (43%), Positives = 11/23 (47%)
Query: 56 GKCITTPGSSYCLCPLG-FTGDL 77
G C+ S C PLG F G L
Sbjct: 404 GGCLDNSSGSGCKSPLGGFQGCL 426
>UNIPROTKB|E2RR85 [details] [associations]
symbol:FAT4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007156 "homophilic cell adhesion" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005509 "calcium ion binding"
evidence=IEA] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR002126 InterPro:IPR015919 InterPro:IPR018097
InterPro:IPR020894 Pfam:PF00028 Pfam:PF07645 PRINTS:PR00205
PROSITE:PS00232 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS50268
SMART:SM00112 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0016021 GO:GO:0005886 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186
InterPro:IPR001791 SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025
GO:GO:0007156 SUPFAM:SSF49313 Gene3D:2.60.40.60
GeneTree:ENSGT00700000104207 Pfam:PF02210 OMA:GKMCESS
EMBL:AAEX03011791 EMBL:AAEX03011792 EMBL:AAEX03011793
Ensembl:ENSCAFT00000006363 Uniprot:E2RR85
Length = 4982
Score = 225 (84.3 bits), Expect = 5.2e-14, Sum P(2) = 5.2e-14
Identities = 94/401 (23%), Positives = 161/401 (40%)
Query: 37 GRSKECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQFNGSSYLR 96
G+ E + C PC +GG C + S YC CP G G C+ L F SY+
Sbjct: 3934 GKMCESSVNYCECNPCFNGGSCQSGVESYYCHCPFGVFGKHCE----LNSYGFEELSYME 3989
Query: 97 YQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGV-GDFIALYLNDRYVDFTFDLGTG 155
+ L + + F I+ + +LLYN G +F+AL + + + F+++LG+G
Sbjct: 3990 FPSLDPNNNYIY---VKFATIKSHALLLYNYDNQTGDRAEFLALEIAEERLRFSYNLGSG 4046
Query: 156 AATLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPG-----------PFTQXX 204
L + +S G +H + R G A L VD +Q PG +T
Sbjct: 4047 TYKLTTMKKVSDGHFHTVIARRAGMAASLTVDSCSENQ--EPGYCTVSNVAVSDDWTLDV 4104
Query: 205 XXXXXXXGGVPDYN-IVSPKVKIKS-SFIGCIQKVLINNHELN-ILGEAIQGVNVVNCAH 261
GG+ I+ + ++S F+GCI + +N L A QG+ + C
Sbjct: 4105 QPNRVTVGGIRSLEPILQRRGHVESHDFVGCIMEFAVNGRPLEPSQALAAQGI-LDQCPR 4163
Query: 262 ---PCITQPCG-SGSCVPLYDGYKCVCTQS-----CKESHLTEVMCASFDHGASFLHYLD 312
C PC G+C + +C C + C++S +T S + G L Y
Sbjct: 4164 LEGACTHSPCQHGGTCTDYWSWQQCHCKEGLTGKYCEKS-ITPDTALSLE-GKGRLDY-- 4219
Query: 313 PEIIHSSGLLHYKFQLHVDFR---ITGYEFN-IDMRIKTSSSSGLILWTGSSQSKDFLAL 368
H S ++ L R + + N ++++ +T S +G+++ +S ++ +
Sbjct: 4220 ----HMSQNEKREYLLKQSIRGAMLEPFGVNSLEIKFRTRSENGILIHI--QESSNYTTV 4273
Query: 369 GIHNGYAHVMYXXXXXXXXXXXX-QTKINNGVWHRLTVHRN 408
I NG H + + +G WH + +N
Sbjct: 4274 KIKNGKVHFTSDAGIAGKVERNIPEVYVADGHWHTFLIGKN 4314
Score = 156 (60.0 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 59/268 (22%), Positives = 97/268 (36%)
Query: 36 KGRSKEC--LEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVP-QFNGS 92
+G +C LE C +PC+HGG C C C G TG C+ + G
Sbjct: 4155 QGILDQCPRLEGACTHSPCQHGGTCTDYWSWQQCHCKEGLTGKYCEKSITPDTALSLEGK 4214
Query: 93 SYLRYQ-GLGEQYLSLLDLTIVFKAIEPNGI----LLYNGHRADGV-------GDFIALY 140
L Y E+ LL +I +EP G+ + + +G+ ++ +
Sbjct: 4215 GRLDYHMSQNEKREYLLKQSIRGAMLEPFGVNSLEIKFRTRSENGILIHIQESSNYTTVK 4274
Query: 141 LNDRYVDFTFDLGTGAATLRSSNPISL--GEWHKLRLTRTGRHAYLQVDRFPSSQILSPG 198
+ + V FT D G R+ + + G WH + + G L +DR + I+ P
Sbjct: 4275 IKNGKVHFTSDAGIAGKVERNIPEVYVADGHWHTFLIGKNGTATVLSIDRLYNRDIIHPT 4334
Query: 199 PFTQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVN 258
GG+P ++ F GCI +L L G+ + ++
Sbjct: 4335 QDFGGLDVLTISLGGIPPNQAHRDS---QTGFDGCIASMLYGGESLPFSGK--HSLASIS 4389
Query: 259 CAHPCITQPC-GSGSCV--PLYDGYKCV 283
P + C G C P + C+
Sbjct: 4390 KTDPSVKIGCRGPNICASNPCWGDLLCI 4417
Score = 140 (54.3 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 55/227 (24%), Positives = 87/227 (38%)
Query: 81 RLDLQVPQFNGSSYLRYQGLGEQYLS---LLDLTIVFKAIEPNGILLYNGHRADGVGDFI 137
RLD + Q YL Q + L + L I F+ NGIL+ H + ++
Sbjct: 4216 RLDYHMSQNEKREYLLKQSIRGAMLEPFGVNSLEIKFRTRSENGILI---HIQES-SNYT 4271
Query: 138 ALYLNDRYVDFTFDLGTGAATLRSSNPISL--GEWHKLRLTRTGRHAYLQVDRFPSSQIL 195
+ + + V FT D G R+ + + G WH + + G L +DR + I+
Sbjct: 4272 TVKIKNGKVHFTSDAGIAGKVERNIPEVYVADGHWHTFLIGKNGTATVLSIDRLYNRDII 4331
Query: 196 SPGPFTQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGE-AIQGV 254
P GG+P ++ F GCI +L L G+ ++ +
Sbjct: 4332 HPTQDFGGLDVLTISLGGIPPNQAHRDS---QTGFDGCIASMLYGGESLPFSGKHSLASI 4388
Query: 255 NV------VNCAHP--CITQPC-GSGSCVPLYDGYKCVCTQSCKESH 292
+ + C P C + PC G C+ + YKCV C SH
Sbjct: 4389 SKTDPSVKIGCRGPNICASNPCWGDLLCINQWYAYKCVPPGDCA-SH 4434
Score = 110 (43.8 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 22/59 (37%), Positives = 34/59 (57%)
Query: 37 GRSKECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQV--PQFNGSS 93
GR+ E ++C PC++G C PGS C+C G+TG +C++ ++ P FNG S
Sbjct: 3896 GRACERDINECLPGPCKNGAVCQNVPGSFNCVCKTGYTGKMCESSVNYCECNPCFNGGS 3954
Score = 99 (39.9 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 20/50 (40%), Positives = 27/50 (54%)
Query: 45 DKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLD--LQVPQFNGS 92
D+C +PC +GG C G C CP GFTG C+ ++ L P NG+
Sbjct: 3866 DECLPSPCHNGGTCHNLVGGFSCSCPDGFTGRACERDINECLPGPCKNGA 3915
Score = 53 (23.7 bits), Expect = 5.2e-14, Sum P(2) = 5.2e-14
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 45 DKCNKTPCEHGGKCI 59
D C PC++GG CI
Sbjct: 3806 DSCIHGPCQNGGSCI 3820
Score = 45 (20.9 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 67 CLCPLGFTGDLCQTRLD--LQVPQFNGSS 93
C C G+ G C+ +D L P NG +
Sbjct: 3850 CKCLPGYAGSWCEIDIDECLPSPCHNGGT 3878
>ZFIN|ZDB-GENE-050425-1 [details] [associations]
symbol:fat1 "FAT tumor suppressor homolog 1"
species:7955 "Danio rerio" [GO:0005509 "calcium ion binding"
evidence=IEA;ISS] [GO:0007155 "cell adhesion" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA;ISS] [GO:0007156 "homophilic
cell adhesion" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016339 "calcium-dependent cell-cell adhesion"
evidence=ISS] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR002126
InterPro:IPR015919 InterPro:IPR018097 InterPro:IPR020894
Pfam:PF00008 Pfam:PF00028 Pfam:PF07645 PRINTS:PR00205
PROSITE:PS00232 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS50268
SMART:SM00112 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
ZFIN:ZDB-GENE-050425-1 GO:GO:0016021 GO:GO:0005886 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 eggNOG:NOG12793 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 GO:GO:0007156 SUPFAM:SSF49313
Gene3D:2.60.40.60 GeneTree:ENSGT00700000104156 Pfam:PF02210
OMA:PYEAFIV HOGENOM:HOG000046499 HOVERGEN:HBG005641 EMBL:BX511093
EMBL:BX537280 EMBL:BX908758 IPI:IPI00866597
Ensembl:ENSDART00000145068 InParanoid:A2BGT8 OrthoDB:EOG47WNMQ
Uniprot:A2BGT8
Length = 4611
Score = 222 (83.2 bits), Expect = 6.0e-14, P = 6.0e-14
Identities = 74/281 (26%), Positives = 125/281 (44%)
Query: 41 EC--LEDKCNKTPCEHGGKCITTPG-SSY-CLCPLGFTGDLCQTRLDLQVPQFNGSSYLR 96
EC L C +PC G +C+ P S Y C+CP G + C R L F+G+ Y R
Sbjct: 3792 ECSILSKLCEGSPCPDGMECVEDPTHSKYRCICPEGKQEE-CSERQSLT---FSGNGYAR 3847
Query: 97 YQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGA 156
Y+ + + + L++ + + ++Y A G I +N R + + FD G+G
Sbjct: 3848 YRLMENENKEEMKLSLRLRTFSTHATVMY----AKGTDYSILEIVNGR-LQYKFDCGSGP 3902
Query: 157 ATLR-SSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVP 215
+ S +S G+WH + L G +A L +D+ ++ +PG GG
Sbjct: 3903 GVVSVHSTQVSDGQWHTVSLEVDGNYARLVLDQVHAASGTAPGTLRTLNLDTSMYFGGHV 3962
Query: 216 DYNIVSPKVKIKSSFIGCIQKVLINNHEL---------NILGEAIQGVNVVNCAHP---C 263
S ++ + + GC++ ++ N EL ++L E ++ + A P C
Sbjct: 3963 RPASGSGRL-VMNGLRGCLEGIVFNGRELPLSQVRGAHSVLEELVEAAPGCSLAPPIQGC 4021
Query: 264 ITQPC-GSGSCVPLYDG-YKCVCTQSCKESH--LTEVMCAS 300
+ PC G+C+ L +G Y C CT + +H +T CAS
Sbjct: 4022 TSNPCTNGGTCLALPNGGYFCKCTAAFMGTHCEVTISPCAS 4062
>UNIPROTKB|F1NNM6 [details] [associations]
symbol:NRXN1 "Neurexin-1" species:9031 "Gallus gallus"
[GO:0007269 "neurotransmitter secretion" evidence=IEA] [GO:0007416
"synapse assembly" evidence=IEA] [GO:0051965 "positive regulation
of synapse assembly" evidence=IEA] [GO:0090129 "positive regulation
of synapse maturation" evidence=IEA] InterPro:IPR000742
InterPro:IPR027158 Pfam:PF00008 PROSITE:PS50026 SMART:SM00181
InterPro:IPR000152 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 Pfam:PF02210
GeneTree:ENSGT00560000076996 PANTHER:PTHR10127:SF309
EMBL:AADN02036293 EMBL:AADN02036298 EMBL:AADN02036299
EMBL:AADN02036300 EMBL:AADN02036301 EMBL:AADN02036302
EMBL:AADN02036303 EMBL:AC157664 EMBL:AC157952 IPI:IPI01017378
Ensembl:ENSGALT00000031962 ArrayExpress:F1NNM6 Uniprot:F1NNM6
Length = 854
Score = 152 (58.6 bits), Expect = 6.4e-14, Sum P(3) = 6.4e-14
Identities = 43/170 (25%), Positives = 80/170 (47%)
Query: 81 RLDLQVPQFNGSSYLRYQGLGEQYLSLLD-LTIVFKAIEPNGILLYNGHRADGVGDFIAL 139
R + + F GS Y Y S D +T+ FK ++ NG++L+ G AD ++ L
Sbjct: 8 RKEEYIATFKGSEYFCYDLSQNPIQSSSDEITLSFKTLQRNGLMLHTGKSAD----YVNL 63
Query: 140 YLNDRYVDFTFDLGTGA--ATLRSSN-PISLGEWHKLRLTRTGRHAYLQVDRFPSSQILS 196
L + V +LG+GA A + N + WH +++TR R + VD ++ +
Sbjct: 64 ALKNGAVSLVINLGSGAFEALVEPVNGKFNDNAWHDVKVTRNLRQVTISVDGILTTTGYT 123
Query: 197 PGPFTQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNI 246
+T GG P + P + ++F+GC+++V+ N+++ +
Sbjct: 124 QEDYTMLGSDDFFYVGGSPSTADL-PGSPVSNNFMGCLKEVVYKNNDVRL 172
Score = 146 (56.5 bits), Expect = 6.6e-07, Sum P(3) = 6.6e-07
Identities = 49/165 (29%), Positives = 81/165 (49%)
Query: 92 SSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFD 151
+SY+ L + Y S+ L FK +G++LYN DG DFI + L Y+ + FD
Sbjct: 635 ASYVALATL-QAYTSM-HLFFQFKTTSLDGLILYNS--GDG-NDFIVVELVKGYLHYVFD 689
Query: 152 LGTGAATLR-SSN-PISLGEWHKLRLTRTGRHAY-LQVDRFPSSQILSPGPFTQXXXXXX 208
LG GA ++ SSN P++ +WH + ++R + + +++D ++Q S
Sbjct: 690 LGNGANLIKGSSNKPLNDNQWHNVMISRDTNNLHTVKIDTKITTQ--STAGARNLDLKSD 747
Query: 209 XXXGGVPDYNIVS-PK-VKIKSSFIGCIQKVLINNHELNILGEAI 251
GGV S PK V K F GC+ V +N +++ +A+
Sbjct: 748 LYIGGVAKEMYKSLPKLVHAKEGFQGCLASVDLNGRLPDLISDAL 792
Score = 134 (52.2 bits), Expect = 6.0e-12, Sum P(3) = 6.0e-12
Identities = 62/279 (22%), Positives = 117/279 (41%)
Query: 114 FKAIEPNGILLYN-G---HRADGVG------DFIALYLNDRYVDFTFDLGTGAATLRS-S 162
F+ EPNG++L++ G H+ D DF A+ + D ++ D+G+G +++
Sbjct: 230 FRTTEPNGLILFSHGKPRHQKDAKHPQMVKVDFFAIEMLDGHLYLLLDMGSGTIKIKALQ 289
Query: 163 NPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYN--IV 220
++ GEW+ + R GR + V+ + +PG GG+P+ +V
Sbjct: 290 KKVNDGEWYHVDFQRDGRSGTISVNTL-RTPYTAPGESEILDLDDDLYLGGLPENKAGLV 348
Query: 221 SPK----VKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNCAHPCITQPCGSGSCVPL 276
P + ++GCI+ + I+ +I Q + + A + C + P
Sbjct: 349 FPTEVWTALLNYGYVGCIRDLFIDGQSKDIR----QMAEIQSTAG--VKPSCSRETAKPC 402
Query: 277 YDGYKCVCTQSCKESHLTEVM-CASFDH-GASFLHYLDPEIIHSSGLLHYKFQLHVDFRI 334
C C++ V C+ + G S + I+ G + K QL V
Sbjct: 403 LSN-PCKNNGVCRDGWNRYVCDCSGTGYLGRSCER--EATILSYDGSMFMKIQLPVVMH- 458
Query: 335 TGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNG 373
T E ++ +R ++ + G+++ T S +S D L L + G
Sbjct: 459 TEAE-DVSLRFRSQRAYGILMATTSRESADTLRLELDAG 496
Score = 116 (45.9 bits), Expect = 5.4e-10, Sum P(3) = 5.4e-10
Identities = 54/226 (23%), Positives = 92/226 (40%)
Query: 25 AWIQLNDGNKIKGRSKECLEDKCNKTPCEHGGKCITTPGSSYCLCP-LGFTGDLCQTRLD 83
A IQ G K S+E + C PC++ G C C C G+ G C+ +
Sbjct: 382 AEIQSTAGVK-PSCSRETAKP-CLSNPCKNNGVCRDGWNRYVCDCSGTGYLGRSCER--E 437
Query: 84 LQVPQFNGSSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLND 143
+ ++GS +++ Q + D+++ F++ GIL+ R D + L L+
Sbjct: 438 ATILSYDGSMFMKIQLPVVMHTEAEDVSLRFRSQRAYGILMATTSRESA--DTLRLELDA 495
Query: 144 RYVDFTFDL---------GTGAATLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQI 194
V T +L G TL + ++ EWH +R+ R G+ L VD +
Sbjct: 496 GRVKLTVNLDCIRINCNSSKGPETLFAGYNLNDNEWHTVRVVRRGKSLKLMVDDQQAMTG 555
Query: 195 LSPGPFTQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLIN 240
G T+ G + + +S + S+FIG +Q + N
Sbjct: 556 QMAGDHTRLEFHNIET-GIITERRYLS---SVPSNFIGHLQSLTFN 597
Score = 84 (34.6 bits), Expect = 6.4e-14, Sum P(3) = 6.4e-14
Identities = 18/66 (27%), Positives = 31/66 (46%)
Query: 344 RIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTK-INNGVWHR 402
+ KT+S GLIL+ S DF+ + + GY H ++ K +N+ WH
Sbjct: 654 QFKTTSLDGLILYN-SGDGNDFIVVELVKGYLHYVFDLGNGANLIKGSSNKPLNDNQWHN 712
Query: 403 LTVHRN 408
+ + R+
Sbjct: 713 VMISRD 718
Score = 71 (30.1 bits), Expect = 6.4e-14, Sum P(3) = 6.4e-14
Identities = 22/66 (33%), Positives = 37/66 (56%)
Query: 446 IRIDTDYSMQSISGGKFEQLNTDSGLYVGGVEDIEELTRS--KYHHSFKGWISNLILSND 503
++IDT + QS +G + L+ S LY+GGV +E+ +S K H+ +G+ + S D
Sbjct: 725 VKIDTKITTQSTAGAR--NLDLKSDLYIGGVA--KEMYKSLPKLVHAKEGF-QGCLASVD 779
Query: 504 YQVKLP 509
+LP
Sbjct: 780 LNGRLP 785
Score = 58 (25.5 bits), Expect = 2.8e-11, Sum P(3) = 2.8e-11
Identities = 10/45 (22%), Positives = 22/45 (48%)
Query: 364 DFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGVWHRLTVHRN 408
DF A+ + +G+ +++ Q K+N+G W+ + R+
Sbjct: 261 DFFAIEMLDGHLYLLLDMGSGTIKIKALQKKVNDGEWYHVDFQRD 305
Score = 50 (22.7 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 263 CITQPCGS-GSCVPLYDGYKCVCTQS 287
C C + G C+ +DG+ C C+ +
Sbjct: 820 CQEDSCANQGVCLQQWDGFSCDCSMT 845
Score = 48 (22.0 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 15/51 (29%), Positives = 27/51 (52%)
Query: 428 EFKCLSIQRLHRTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVED 478
E+ + QR R+G + + T Y+ + G+ E L+ D LY+GG+ +
Sbjct: 296 EWYHVDFQRDGRSGTISVNTLRTPYT----APGESEILDLDDDLYLGGLPE 342
Score = 42 (19.8 bits), Expect = 6.6e-07, Sum P(3) = 6.6e-07
Identities = 8/28 (28%), Positives = 16/28 (57%)
Query: 11 DDWNTVRVFRHRWDAWIQLNDGNKIKGR 38
++W+TVRV R + ++D + G+
Sbjct: 529 NEWHTVRVVRRGKSLKLMVDDQQAMTGQ 556
>UNIPROTKB|E1B949 [details] [associations]
symbol:FAT4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005509 "calcium
ion binding" evidence=IEA] [GO:0007156 "homophilic cell adhesion"
evidence=IEA] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR002126 InterPro:IPR015919 InterPro:IPR018097
InterPro:IPR020894 Pfam:PF00028 Pfam:PF07645 PRINTS:PR00205
PROSITE:PS00232 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS50268
SMART:SM00112 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0016021 GO:GO:0005886 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186
InterPro:IPR001791 SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025
GO:GO:0007156 SUPFAM:SSF49313 Gene3D:2.60.40.60
GeneTree:ENSGT00700000104207 Pfam:PF02210 OMA:GKMCESS
EMBL:DAAA02044707 EMBL:DAAA02044708 EMBL:DAAA02044709
IPI:IPI00704274 Ensembl:ENSBTAT00000013316 Uniprot:E1B949
Length = 4983
Score = 224 (83.9 bits), Expect = 6.7e-14, Sum P(2) = 6.7e-14
Identities = 92/399 (23%), Positives = 160/399 (40%)
Query: 37 GRSKECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQFNGSSYLR 96
G+ E + C PC +GG C + S YC CP G G C+ L F SY+
Sbjct: 3932 GKMCESSVNYCECNPCFNGGSCQSGVESYYCHCPFGVFGKHCE----LNSYGFEELSYME 3987
Query: 97 YQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGV-GDFIALYLNDRYVDFTFDLGTG 155
+ L + + F I+ + +LLYN G +F+AL + + + F+++LG+G
Sbjct: 3988 FPSLDPNNNYIY---VKFATIKSHALLLYNYDNQTGDRAEFLALEIAEERLRFSYNLGSG 4044
Query: 156 AATLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQ---------ILSPGPFTQXXXX 206
L + +S G +H + R G A L VD +Q + +T
Sbjct: 4045 TYKLTTMKKVSDGHFHTVIARRAGMAASLTVDSCSENQEAGYCTVSNVAVSDDWTLDVQP 4104
Query: 207 XXXXXGGVPDYN-IVSPKVKIKS-SFIGCIQKVLINNHELN-ILGEAIQGVNVVNCAH-- 261
GG+ I+ + ++S F+GCI + +N L A QG+ + C
Sbjct: 4105 NRVTVGGIRALEPILQRRGHVESHDFVGCIMEFAVNGRPLEPSQALAAQGI-LDQCPRLE 4163
Query: 262 -PCITQPCG-SGSCVPLYDGYKCVCTQS-----CKESHLTEVMCASFDHGASFLHYLDPE 314
C PC G+C + +C C + C++S +T S + G L Y
Sbjct: 4164 GACTHSPCQHGGTCTDYWSWQQCHCREGLTGKYCEKS-ITPDTALSLE-GKGRLDY---- 4217
Query: 315 IIHSSGLLHYKFQLHVDFR---ITGYEFN-IDMRIKTSSSSGLILWTGSSQSKDFLALGI 370
H S ++ L R + + N ++++ +T S +G+++ +S ++ + I
Sbjct: 4218 --HMSQNEKREYLLRQSIRGAMLEPFGVNSLEVKFRTRSENGILIHI--QESSNYTTVKI 4273
Query: 371 HNGYAHVMYXXXXXXXXXXXX-QTKINNGVWHRLTVHRN 408
NG H + + +G WH + +N
Sbjct: 4274 KNGKVHFTSDAGIAGKVERNIPEVYVADGHWHTFLIGKN 4312
Score = 158 (60.7 bits), Expect = 6.1e-09, Sum P(3) = 6.1e-09
Identities = 60/268 (22%), Positives = 96/268 (35%)
Query: 36 KGRSKEC--LEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVP-QFNGS 92
+G +C LE C +PC+HGG C C C G TG C+ + G
Sbjct: 4153 QGILDQCPRLEGACTHSPCQHGGTCTDYWSWQQCHCREGLTGKYCEKSITPDTALSLEGK 4212
Query: 93 SYLRYQ-GLGEQYLSLLDLTIVFKAIEPNGI----LLYNGHRADGV-------GDFIALY 140
L Y E+ LL +I +EP G+ + + +G+ ++ +
Sbjct: 4213 GRLDYHMSQNEKREYLLRQSIRGAMLEPFGVNSLEVKFRTRSENGILIHIQESSNYTTVK 4272
Query: 141 LNDRYVDFTFDLGTGAATLRSSNPISL--GEWHKLRLTRTGRHAYLQVDRFPSSQILSPG 198
+ + V FT D G R+ + + G WH + + G L VDR + I+ P
Sbjct: 4273 IKNGKVHFTSDAGIAGKVERNIPEVYVADGHWHTFLIGKNGTATVLSVDRIHNRDIIHPT 4332
Query: 199 PFTQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVN 258
GG+P + F GCI +L L G+ + ++
Sbjct: 4333 QDFGGLDVLTISLGGIPPNQAHRDAQTGPAGFDGCIASMLYGGESLPFSGK--HSLASIS 4390
Query: 259 CAHPCITQPC-GSGSCV--PLYDGYKCV 283
P + C G C P + C+
Sbjct: 4391 KTDPSVKIGCRGPNICASNPCWGDLLCI 4418
Score = 144 (55.7 bits), Expect = 9.8e-11, Sum P(2) = 9.8e-11
Identities = 55/227 (24%), Positives = 86/227 (37%)
Query: 81 RLDLQVPQFNGSSYLRYQGLGEQYLS---LLDLTIVFKAIEPNGILLYNGHRADGVGDFI 137
RLD + Q YL Q + L + L + F+ NGIL+ H + ++
Sbjct: 4214 RLDYHMSQNEKREYLLRQSIRGAMLEPFGVNSLEVKFRTRSENGILI---HIQES-SNYT 4269
Query: 138 ALYLNDRYVDFTFDLGTGAATLRSSNPISL--GEWHKLRLTRTGRHAYLQVDRFPSSQIL 195
+ + + V FT D G R+ + + G WH + + G L VDR + I+
Sbjct: 4270 TVKIKNGKVHFTSDAGIAGKVERNIPEVYVADGHWHTFLIGKNGTATVLSVDRIHNRDII 4329
Query: 196 SPGPFTQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGE-AIQGV 254
P GG+P + F GCI +L L G+ ++ +
Sbjct: 4330 HPTQDFGGLDVLTISLGGIPPNQAHRDAQTGPAGFDGCIASMLYGGESLPFSGKHSLASI 4389
Query: 255 NV------VNCAHP--CITQPC-GSGSCVPLYDGYKCVCTQSCKESH 292
+ + C P C + PC G C+ + YKCV C SH
Sbjct: 4390 SKTDPSVKIGCRGPNICASNPCWGDLLCINQWYAYKCVPPGDCA-SH 4435
Score = 106 (42.4 bits), Expect = 9.8e-11, Sum P(2) = 9.8e-11
Identities = 21/59 (35%), Positives = 34/59 (57%)
Query: 37 GRSKECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQV--PQFNGSS 93
GR+ E ++C +PC++G C PG C+C G+TG +C++ ++ P FNG S
Sbjct: 3894 GRACERDINECLPSPCKNGAICQNFPGGFNCVCKTGYTGKMCESSVNYCECNPCFNGGS 3952
Score = 102 (41.0 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 21/57 (36%), Positives = 29/57 (50%)
Query: 45 DKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLD--LQVPQFNGSSYLRYQG 99
D+C +PC +GG C G C CP GFTG C+ ++ L P NG+ + G
Sbjct: 3864 DECLPSPCHNGGTCHNLVGGFSCSCPDGFTGRACERDINECLPSPCKNGAICQNFPG 3920
Score = 71 (30.1 bits), Expect = 6.1e-09, Sum P(3) = 6.1e-09
Identities = 17/38 (44%), Positives = 20/38 (52%)
Query: 259 CAHP--CITQPC-GSGSCVP-LYDGYKCVCTQSCKESH 292
C P C + PC GSC P L+ G+ C SC ESH
Sbjct: 4426 CVPPGDCASHPCQNGGSCEPGLHSGFTC----SCPESH 4459
Score = 53 (23.7 bits), Expect = 6.7e-14, Sum P(2) = 6.7e-14
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 45 DKCNKTPCEHGGKCI 59
D C PC++GG C+
Sbjct: 3804 DSCAPGPCQNGGSCV 3818
Score = 50 (22.7 bits), Expect = 2.3e-05, Sum P(3) = 2.3e-05
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 67 CLCPLGFTGDLCQTRLD--LQVPQFNGSS 93
C C G+TG C+ +D L P NG +
Sbjct: 3848 CKCLPGYTGSWCEIDIDECLPSPCHNGGT 3876
>UNIPROTKB|Q9BZ76 [details] [associations]
symbol:CNTNAP3 "Contactin-associated protein-like 3"
species:9606 "Homo sapiens" [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0008037 "cell
recognition" evidence=NAS] [GO:0016021 "integral to membrane"
evidence=NAS] InterPro:IPR000421 InterPro:IPR000742 Pfam:PF00754
PROSITE:PS01285 PROSITE:PS01286 PROSITE:PS50022 PROSITE:PS50026
SMART:SM00181 SMART:SM00231 INTERPRO:IPR002181 GO:GO:0016021
GO:GO:0005886 GO:GO:0007165 GO:GO:0005576 GO:GO:0007155
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186
InterPro:IPR008979 SUPFAM:SSF49785 InterPro:IPR001791 SMART:SM00282
PROSITE:PS50025 Gene3D:3.90.215.10 InterPro:IPR014716 SMART:SM00186
SUPFAM:SSF56496 PROSITE:PS00514 PROSITE:PS51406 Pfam:PF02210
GO:GO:0008037 UniGene:Hs.521495 UniGene:Hs.604441 HPA:HPA015604
HPA:HPA047731 eggNOG:NOG314648 HOVERGEN:HBG057718
HOGENOM:HOG000230964 EMBL:AF333769 EMBL:AB051501 EMBL:AL162501
EMBL:AL353729 IPI:IPI00001245 IPI:IPI00645313 RefSeq:NP_387504.2
UniGene:Hs.128474 ProteinModelPortal:Q9BZ76 SMR:Q9BZ76
STRING:Q9BZ76 PhosphoSite:Q9BZ76 DMDM:209572752 PaxDb:Q9BZ76
PRIDE:Q9BZ76 Ensembl:ENST00000297668 GeneID:79937 KEGG:hsa:79937
UCSC:uc004abi.3 UCSC:uc004abk.1 CTD:79937 GeneCards:GC09M039064
H-InvDB:HIX0008061 HGNC:HGNC:13834 MIM:610517 neXtProt:NX_Q9BZ76
PharmGKB:PA134963289 InParanoid:Q9BZ76 OMA:FHCKKSR
OrthoDB:EOG4VMFDJ PhylomeDB:Q9BZ76 GenomeRNAi:79937 NextBio:69878
ArrayExpress:Q9BZ76 Bgee:Q9BZ76 CleanEx:HS_CNTNAP3
Genevestigator:Q9BZ76 GermOnline:ENSG00000106714 Uniprot:Q9BZ76
Length = 1288
Score = 184 (69.8 bits), Expect = 7.6e-14, Sum P(2) = 7.6e-14
Identities = 90/362 (24%), Positives = 150/362 (41%)
Query: 64 SSYCLCPLGFTGDLCQTRLDLQVPQFNG-SSYLRYQGLGEQYLSLLDLTIVFKAIEPNGI 122
++Y L PL GD Q+ + FN +SYL + + + D+ FK +G+
Sbjct: 776 AAYTLGPLLCRGD--QSFWNSA--SFNTETSYLHFPAFHGELTA--DVCFFFKTTVSSGV 829
Query: 123 LLYNGHRADGVGDFIALYLN-DRYVDFTFDLGTGAA--TLRSSNPISLGEWHKLRLTRTG 179
+ N G+ DFI + L V F+FD+G G T++S P + +WH +R R
Sbjct: 830 FMENL----GITDFIRIELRAPTEVTFSFDVGNGPCEVTVQSPTPFNDNQWHHVRAERNV 885
Query: 180 RHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLI 239
+ A LQVD+ P Q + P P + + + F+GCI+ + +
Sbjct: 886 KGASLQVDQLP--QKMQPAPADGHVRLQ------LNSQLFIGGTATRQRGFLGCIRSLQL 937
Query: 240 NNHELNILGEAIQGVNVV-NCAHPCITQP--CGSGS-CVPLYDGYKCVCTQSCKESHL-T 294
N L++ A V CA C T C +G C G C C S + +
Sbjct: 938 NGVALDLEERATVTPGVEPGCAGHCSTYGHLCRNGGRCREKRRGVTCDCAFSAYDGPFCS 997
Query: 295 EVMCASFDHGASFLHYLDPEIIHSSGLLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLI 354
+ A F G+S ++ S LH D +T E I + +T+ + L+
Sbjct: 998 NEISAYFATGSSMTYHFQEHYTLSENSSSLVSSLHRDVTLTR-EM-ITLSFRTTRTPSLL 1055
Query: 355 LWTGSSQSKDFLALGI-HNGYAHVMYXXXXXXXXXXXXQTKIN--NGVWHRLTVHRNFMV 411
L+ SS +++L++ + +NG + Y N +G H++ ++R V
Sbjct: 1056 LYV-SSFYEEYLSVILANNGSLQIRYKLDRHQNPDAFTFDFKNMADGQLHQVKINREEAV 1114
Query: 412 VM 413
VM
Sbjct: 1115 VM 1116
Score = 82 (33.9 bits), Expect = 7.6e-14, Sum P(2) = 7.6e-14
Identities = 15/41 (36%), Positives = 24/41 (58%)
Query: 43 LEDKCNKTPCEHGGKCITTPGSSYCLC-PLGFTGDLCQTRL 82
+ D+C + CEHGG+C + + C C G+TG+ C + L
Sbjct: 547 ITDRCLPSYCEHGGECSQSWDTFSCDCLGTGYTGETCHSSL 587
Score = 40 (19.1 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 10/23 (43%), Positives = 11/23 (47%)
Query: 56 GKCITTPGSSYCLCPLG-FTGDL 77
G C+ S C PLG F G L
Sbjct: 492 GGCLDNSSGSGCKSPLGGFQGCL 514
>UNIPROTKB|F1NDL6 [details] [associations]
symbol:F1NDL6 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005769 "early endosome" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0008076
"voltage-gated potassium channel complex" evidence=IEA] [GO:0009986
"cell surface" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=IEA] [GO:0021756 "striatum development" evidence=IEA]
[GO:0021761 "limbic system development" evidence=IEA] [GO:0021794
"thalamus development" evidence=IEA] [GO:0030673 "axolemma"
evidence=IEA] [GO:0031175 "neuron projection development"
evidence=IEA] [GO:0044224 "juxtaparanode region of axon"
evidence=IEA] [GO:0071109 "superior temporal gyrus development"
evidence=IEA] [GO:0071205 "protein localization to juxtaparanode
region of axon" evidence=IEA] [GO:0071625 "vocalization behavior"
evidence=IEA] InterPro:IPR000742 PROSITE:PS50026 SMART:SM00181
INTERPRO:IPR002181 GO:GO:0016021 GO:GO:0007165 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025 SUPFAM:SSF56496
PROSITE:PS51406 Pfam:PF02210 InterPro:IPR003585 SMART:SM00294
GeneTree:ENSGT00560000076804 OMA:TSQKCDE EMBL:AADN02027247
EMBL:AADN02027248 EMBL:AADN02027249 EMBL:AADN02027250
EMBL:AADN02027251 EMBL:AADN02027252 EMBL:AADN02027253
EMBL:AADN02027254 EMBL:AADN02027255 EMBL:AADN02027256
EMBL:AADN02027257 EMBL:AADN02027258 EMBL:AADN02027259
EMBL:AADN02027260 EMBL:AADN02027261 EMBL:AADN02027262
EMBL:AADN02027263 EMBL:AADN02027264 EMBL:AADN02027265
EMBL:AADN02027266 EMBL:AADN02027267 EMBL:AADN02027268
EMBL:AADN02027269 EMBL:AADN02027270 EMBL:AADN02027271
EMBL:AADN02027272 EMBL:AADN02027273 EMBL:AADN02027274
EMBL:AADN02027275 EMBL:AADN02027276 EMBL:AADN02027277
EMBL:AADN02027278 EMBL:AADN02027279 EMBL:AADN02027280
EMBL:AADN02027281 EMBL:AADN02027282 EMBL:AADN02027283
EMBL:AADN02027284 IPI:IPI00590315 Ensembl:ENSGALT00000020230
Uniprot:F1NDL6
Length = 882
Score = 181 (68.8 bits), Expect = 9.9e-14, Sum P(2) = 9.9e-14
Identities = 100/407 (24%), Positives = 170/407 (41%)
Query: 92 SSYLRYQGL-GEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYL-NDRYVDFT 149
SSYL + GE + D++ FK +G+ L N G DFI L L + V F+
Sbjct: 358 SSYLHFSTFQGE---TSADISFYFKTSASDGVFLENL----GNTDFIKLELKSSTEVSFS 410
Query: 150 FDLGTGAATL--RSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGP-FTQXXXX 206
FD+G G + +S N ++ +WH++ R + A LQVD+ P +P T+
Sbjct: 411 FDVGNGPVEIIVQSPNQLNDDQWHRVSAERNVKQASLQVDQLPPEVRKAPTEGHTRLELY 470
Query: 207 XXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVV-NCAHPCIT 265
G + F+GCI+ + +N L++ A + V C+ C +
Sbjct: 471 SQLYVGAAGG----------QQGFLGCIRSLRMNGITLDLEERAKVTLGVKPGCSGHCTS 520
Query: 266 QP--CGSGS-CVPLYDGYKCVCTQSCKESHLT-EVMCASFDHGASFLHYLDPEIIHSSG- 320
C +G CV Y+GY C C+++ + + + A F+ G +L Y HS G
Sbjct: 521 YGMYCANGGKCVEKYNGYSCDCSKTAYDGPFCIKDVGAFFEEGM-WLRYN----FHSPGT 575
Query: 321 ----LLHYKFQLHVD--FRITGYEFN---IDMRIKTSSSSGLILWTGSSQSKDFLALGIH 371
L+ D +T + N + T+ S ++L+ SS ++DF+A+ +
Sbjct: 576 SMKDLVSRTLLSSTDPEITVTSHNLNKEELSFSFSTTKSPCVLLYI-SSYTQDFMAVLVK 634
Query: 372 -NGYAHVMYXXXXXXXXXXXXQTKIN--NGVWHRLTVHRN----FMVVMHGSSHTRS-NK 423
+G + Y N NG H + + RN + + H T S
Sbjct: 635 PSGNLQIRYSLGGTKEPYNIDVDHRNMANGQPHTVNITRNERDIILQIDHYPPATYSLPA 694
Query: 424 SSKIEF---KCLSIQRLHRTGK--QCLIRIDTDYSMQSISGGKFEQL 465
+S I+F K L + ++ GK Q + + +T +S +F Q+
Sbjct: 695 ASDIQFNSPKALFLGKVIEIGKIDQDIYKYNTPGFTGCLSRVQFNQI 741
Score = 80 (33.2 bits), Expect = 9.9e-14, Sum P(2) = 9.9e-14
Identities = 15/39 (38%), Positives = 19/39 (48%)
Query: 45 DKCNKTPCEHGGKCITTPGSSYCLCP-LGFTGDLCQTRL 82
D+C CEH GKC T S C C G++G C +
Sbjct: 107 DRCMPNYCEHDGKCTQTWDSFKCTCDGTGYSGTTCHNSI 145
>UNIPROTKB|P82279 [details] [associations]
symbol:CRB1 "Protein crumbs homolog 1" species:9606 "Homo
sapiens" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005902
"microvillus" evidence=IEA] [GO:0007009 "plasma membrane
organization" evidence=IEA] [GO:0042462 "eye photoreceptor cell
development" evidence=IEA] [GO:0005576 "extracellular region"
evidence=IEA] [GO:0016324 "apical plasma membrane" evidence=IEA]
[GO:0007163 "establishment or maintenance of cell polarity"
evidence=TAS] [GO:0007267 "cell-cell signaling" evidence=TAS]
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 SMART:SM00179
SMART:SM00181 InterPro:IPR000152 GO:GO:0016021 GO:GO:0005576
GO:GO:0007163 GO:GO:0016324 GO:GO:0007009 GO:GO:0005509
EMBL:CH471067 GO:GO:0007267 Orphanet:791 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186 eggNOG:NOG12793
InterPro:IPR001791 SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025
Orphanet:65 GO:GO:0005902 Pfam:PF02210 GO:GO:0042462 Pfam:PF12661
KO:K16681 EMBL:AF154671 EMBL:AY043323 EMBL:AY043324 EMBL:AY043325
EMBL:AJ748821 EMBL:BX640729 EMBL:AK299368 EMBL:AL513325
EMBL:AL136322 EMBL:AL139136 EMBL:AL356315 EMBL:BC136271
IPI:IPI00015785 IPI:IPI00397504 IPI:IPI00607552 IPI:IPI00607891
RefSeq:NP_001180569.1 RefSeq:NP_001244894.1 RefSeq:NP_001244895.1
RefSeq:NP_957705.1 UniGene:Hs.126135 ProteinModelPortal:P82279
SMR:P82279 IntAct:P82279 MINT:MINT-1774304 STRING:P82279
PhosphoSite:P82279 DMDM:71153499 PaxDb:P82279 PRIDE:P82279
Ensembl:ENST00000367397 Ensembl:ENST00000367399
Ensembl:ENST00000367400 Ensembl:ENST00000448952
Ensembl:ENST00000484075 Ensembl:ENST00000538660 GeneID:23418
KEGG:hsa:23418 UCSC:uc001gtz.3 UCSC:uc009wza.3 CTD:23418
GeneCards:GC01P197170 HGNC:HGNC:2343 MIM:172870 MIM:268000
MIM:600105 MIM:604210 MIM:613835 neXtProt:NX_P82279 Orphanet:251295
PharmGKB:PA26863 HOVERGEN:HBG080001 InParanoid:P82279 OMA:QYIRVWL
OrthoDB:EOG4VX24C PhylomeDB:P82279 GenomeRNAi:23418 NextBio:45631
ArrayExpress:P82279 Bgee:P82279 CleanEx:HS_CRB1
Genevestigator:P82279 GermOnline:ENSG00000134376 Uniprot:P82279
Length = 1406
Score = 173 (66.0 bits), Expect = 1.1e-13, Sum P(4) = 1.1e-13
Identities = 68/263 (25%), Positives = 109/263 (41%)
Query: 47 CNKTPCEHGGKCIT--TPGSS--YCLCPLGFTGDLCQTRLDLQVPQFNGSSYLRYQ-GLG 101
C C + G CI G CLCP G+TG LC+ L F G +L + G
Sbjct: 445 CTHQQCLNNGTCIPHFQDGQHGFSCLCPSGYTGSLCEIATTLS---FEGDGFLWVKSGSV 501
Query: 102 EQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRS 161
S+ ++ + F+ ++P +LL+ +R F+ L L Y+ + + + L
Sbjct: 502 TTKGSVCNIALRFQTVQPMALLLFRSNR----DVFVKLELLSGYIHLSIQVNNQSKVLLF 557
Query: 162 -SNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILS--PGPFTQXXXXXX---XXXGGVP 215
S+ S GEWH + + +D + ++ P P GG+P
Sbjct: 558 ISHNTSDGEWHFVEVIFAEAVTLTLIDDSCKEKCIAKAPTPLESDQSICAFQNSFLGGLP 617
Query: 216 DYNIVSPKVKIKS--------SFIGCIQKVLIN-NH-ELNILGEAIQGVNV-VNCAHP-- 262
+ S V + + SF+GC+Q + I+ NH L + +NV C
Sbjct: 618 -VGMTSNGVALLNFYNMPSTPSFVGCLQDIKIDWNHITLENISSG-SSLNVKAGCVRKDW 675
Query: 263 CITQPCGS-GSCVPLYDGYKCVC 284
C +QPC S G C+ L+ Y+C C
Sbjct: 676 CESQPCQSRGRCINLWLSYQCDC 698
Score = 143 (55.4 bits), Expect = 9.6e-06, Sum P(3) = 9.6e-06
Identities = 86/403 (21%), Positives = 153/403 (37%)
Query: 29 LNDGNKIKGRSKECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLC-QTRLDLQVP 87
++ G+ + ++ +D C PC+ G+CI S C C + G C + + +
Sbjct: 658 ISSGSSLNVKAGCVRKDWCESQPCQSRGRCINLWLSYQCDCHRPYEGPNCLREYVAGRFG 717
Query: 88 QFNGSSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVD 147
Q + + Y+ + L E Y + L++ + ++P+G+LL + +I ++L +
Sbjct: 718 QDDSTGYVIFT-LDESYGDTISLSMFVRTLQPSGLLLA---LENSTYQYIRVWLERGRLA 773
Query: 148 FTFDLGTGAATLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILS--PGPFTQXXX 205
L + L ++ G H + L Y +++ + SSQ L +
Sbjct: 774 M---LTPNSPKLVVKFVLNDGNVHLISLKIK---PY-KIELYQSSQNLGFISASTWKIEK 826
Query: 206 XXXXXXGGVPDYNIVSPKVKIKSSFI-GCIQKVLINNHELNILGEAIQG-------VNVV 257
GG+PD + ++ F GCIQ V +NN L VNV
Sbjct: 827 GDVIYIGGLPD----KQETELNGGFFKGCIQDVRLNNQNLEFFPNPTNNASLNPVLVNVT 882
Query: 258 N-CA--HPCITQPCGSGS-CVPLYDGYKCVCTQSCKESHLTEVMCASFD---HGASFLHY 310
CA + C + PC +G C +D + C C EV F HGA
Sbjct: 883 QGCAGDNSCKSNPCHNGGVCHSRWDDFSCSCPALTSGKACEEVQWCGFSPCPHGAQCQPV 942
Query: 311 LDP-EIIHSSGLLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGL------ILWTGSSQSK 363
L E I ++ Q+ FR G NI + T+ + G ++ + +
Sbjct: 943 LQGFECIANAVFNGQSGQIL--FRSNG---NITREL-TNITFGFRTRDANVIILHAEKEP 996
Query: 364 DFLALGIHNGYAHVMYXXXXXXXXXXXXQTK-INNGVWHRLTV 405
+FL + I + + +N+G WH +T+
Sbjct: 997 EFLNISIQDSRLFFQLQSGNSFYMLSLTSLQSVNDGTWHEVTL 1039
Score = 113 (44.8 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 19/43 (44%), Positives = 26/43 (60%)
Query: 42 CLE-DKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLD 83
CL+ + CN PC HGG C S +C CPLG++G C+ +D
Sbjct: 1137 CLQLNVCNSNPCLHGGNCEDIYSSYHCSCPLGWSGKHCELNID 1179
Score = 108 (43.1 bits), Expect = 0.00011, Sum P(4) = 0.00011
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 40 KEC--LEDKCNKTPCEHGGKCITTPG--SSYCLCPLGFTGDLCQTRL 82
K+C ++D C PC+ C+ TPG S C CP G++G +C+T +
Sbjct: 65 KDCDNMKDPCFSNPCQGSATCVNTPGERSFLCKCPPGYSGTICETTI 111
Score = 84 (34.6 bits), Expect = 1.1e-13, Sum P(4) = 1.1e-13
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 42 CLED--KCNKTPCEHGGKCITTPGSSYCLCP 70
C ED +C+ PC++GG C PG+ C CP
Sbjct: 394 CEEDVNECSSNPCQNGGTCENLPGNYTCHCP 424
Score = 68 (29.0 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 16/57 (28%), Positives = 27/57 (47%)
Query: 253 GVNVVNCA---HPCITQPCGSGS-CVPLYDGYKCVCTQS-----CKESHLTEVMCAS 300
G VNC C + C +G+ C+ +GY C+C + C++S L +C +
Sbjct: 1205 GYTGVNCEVDIDNCQSHQCANGATCISHTNGYSCLCFGNFTGKFCRQSRLPSTVCGN 1261
Score = 66 (28.3 bits), Expect = 0.00011, Sum P(4) = 0.00011
Identities = 16/41 (39%), Positives = 20/41 (48%)
Query: 263 CITQPCGSGS-CVPLYDGYKCVCTQSCKESHLT-EV-MCAS 300
C + PC +G+ C DGY C C + H EV CAS
Sbjct: 152 CASSPCQNGAVCQDGIDGYSCFCVPGYQGRHCDLEVDECAS 192
Score = 60 (26.2 bits), Expect = 0.00040, Sum P(4) = 0.00040
Identities = 12/46 (26%), Positives = 18/46 (39%)
Query: 240 NNHELNILGEAIQGVNVVNCAHPCITQPC-GSGSCVPLYDGYKCVC 284
N + N G G + C ++PC + +C D Y C C
Sbjct: 282 NRYSCNCTGSGFTGTHCETLMPLCWSKPCHNNATCEDSVDNYTCHC 327
Score = 57 (25.1 bits), Expect = 1.1e-13, Sum P(4) = 1.1e-13
Identities = 10/31 (32%), Positives = 13/31 (41%)
Query: 263 CITQPC-GSGSCVPLYDGYKCVCTQSCKESH 292
C + PC G+C +Y Y C C H
Sbjct: 1143 CNSNPCLHGGNCEDIYSSYHCSCPLGWSGKH 1173
Score = 57 (25.1 bits), Expect = 0.00077, Sum P(4) = 0.00077
Identities = 12/26 (46%), Positives = 14/26 (53%)
Query: 263 CITQPC-GSGSCVPLYDGYKCVCTQS 287
C +QPC G CV + Y C CT S
Sbjct: 266 CASQPCLHGGLCVDGENRYSCNCTGS 291
Score = 54 (24.1 bits), Expect = 0.00011, Sum P(4) = 0.00011
Identities = 16/66 (24%), Positives = 27/66 (40%)
Query: 340 NIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGV 399
NI +R +T L+L+ S F+ L + +GY H+ ++G
Sbjct: 509 NIALRFQTVQPMALLLFR--SNRDVFVKLELLSGYIHLSIQVNNQSKVLLFISHNTSDGE 566
Query: 400 WHRLTV 405
WH + V
Sbjct: 567 WHFVEV 572
Score = 53 (23.7 bits), Expect = 1.3e-13, Sum P(3) = 1.3e-13
Identities = 8/22 (36%), Positives = 10/22 (45%)
Query: 263 CITQPCGSGSCVPLYDGYKCVC 284
C + PC G+C Y C C
Sbjct: 1181 CFSNPCIHGNCSDRVAAYHCTC 1202
Score = 53 (23.7 bits), Expect = 1.3e-10, Sum P(4) = 1.3e-10
Identities = 6/15 (40%), Positives = 11/15 (73%)
Query: 45 DKCNKTPCEHGGKCI 59
++CN PC+ G+C+
Sbjct: 341 NECNSNPCQSNGECV 355
Score = 51 (23.0 bits), Expect = 2.1e-13, Sum P(3) = 2.1e-13
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 263 CITQPCGSGS-CVPLYDGYKCVC 284
C + PC +G C L + ++C+C
Sbjct: 1301 CASDPCVNGGLCQDLLNKFQCLC 1323
Score = 43 (20.2 bits), Expect = 1.4e-12, Sum P(3) = 1.4e-12
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 471 LYVGGVEDIEELTRSKYHHSFKGWISNLILSN 502
+Y+GG+ D +E + FKG I ++ L+N
Sbjct: 830 IYIGGLPDKQETELNGGF--FKGCIQDVRLNN 859
Score = 39 (18.8 bits), Expect = 3.5e-12, Sum P(3) = 3.5e-12
Identities = 12/49 (24%), Positives = 26/49 (53%)
Query: 437 LHRTGK-QCLIRIDTDYSMQSISGGKFEQLNTDSGLYVG--GVEDIEEL 482
L +T + Q + +T + +I+ G L ++ +YVG +++I+ L
Sbjct: 1045 LSQTSRWQMEVDNETPFVTSTIATGSLNFLKDNTDIYVGDRAIDNIKGL 1093
Score = 38 (18.4 bits), Expect = 1.1e-13, Sum P(4) = 1.1e-13
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 440 TGKQCLIRIDTDYSMQSISG 459
+GK C + ID +S I G
Sbjct: 1170 SGKHCELNIDECFSNPCIHG 1189
>ZFIN|ZDB-GENE-030722-4 [details] [associations]
symbol:slit1b "slit homolog 1b (Drosophila)"
species:7955 "Danio rerio" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0007411 "axon guidance" evidence=NAS]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 ZFIN:ZDB-GENE-030722-4 GO:GO:0007411
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
Pfam:PF02210 Pfam:PF12661 Pfam:PF01463 HOVERGEN:HBG057959
EMBL:DQ153065 IPI:IPI00481688 RefSeq:NP_001030147.1
UniGene:Dr.48282 ProteinModelPortal:Q3Y6S4 SMR:Q3Y6S4 STRING:Q3Y6S4
GeneID:561685 KEGG:dre:561685 CTD:561685 NextBio:20884046
Uniprot:Q3Y6S4
Length = 1532
Score = 214 (80.4 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 79/268 (29%), Positives = 115/268 (42%)
Query: 37 GRSKECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQFNGSSYLR 96
GR E C+ C +G C G++ C C GF G C+ +L L V + SYL
Sbjct: 1114 GRLCEASVSACDLLQCVNGAPCEEISGTAVCQCLPGFNGLRCE-KL-LSVNFIDRDSYLL 1171
Query: 97 YQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTG- 155
Q ++T+ E NGILLYNG V + IA+ L+D +V T+D G
Sbjct: 1172 LLRDATQSTHN-NITLQVSTAEDNGILLYNG-----VNEHIAVELHDGHVKVTYDAGRQP 1225
Query: 156 AATLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVP 215
+T+ SS ++ G++H + L R L +D + + S G GG+P
Sbjct: 1226 GSTIYSSEIVNDGQFHTVELVTYERMVNLSIDGGLPTTLDSSGHIQPLTRDAPLYVGGMP 1285
Query: 216 DY--NIVS---PKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNCAHPCITQPCGS 270
+ ++ S P V SSF GCI+ + INN EL + VV C C +
Sbjct: 1286 ENAKSLSSNHWPPVN-GSSFQGCIRNLYINN-ELQDFTQTQMKPGVVPGCQACQELLCVN 1343
Query: 271 GSCVP-LYDGYKCVCTQSCKESHLTEVM 297
G C P G C C H +++
Sbjct: 1344 GLCQPDSAIGPVCHCQPGWGGKHCDQIL 1371
Score = 98 (39.6 bits), Expect = 1.9e-07, Sum P(3) = 1.9e-07
Identities = 18/43 (41%), Positives = 23/43 (53%)
Query: 38 RSKECLEDKC--NKTPCEHGGKCITTPGSSYCLCPLGFTGDLC 78
+ +E ED C + PC+ G CI T C+CP GF GD C
Sbjct: 1037 KCEEYEEDLCYPGQNPCQRGSTCIPTVSGPKCICPPGFVGDDC 1079
Score = 93 (37.8 bits), Expect = 6.4e-07, Sum P(3) = 6.4e-07
Identities = 21/52 (40%), Positives = 26/52 (50%)
Query: 36 KGRSKECLEDKCNKTPCEHGGKCITTPGSSY----CLCPLGFTGDLCQTRLD 83
KGR+ E C PC +GG C P S C+CPLGF G C+ +D
Sbjct: 956 KGRNCELSISACEANPCVNGGTC--RPEESRRGFRCVCPLGFEGLFCELDVD 1005
Score = 82 (33.9 bits), Expect = 1.9e-07, Sum P(3) = 1.9e-07
Identities = 50/219 (22%), Positives = 84/219 (38%)
Query: 219 IVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNCAHPCITQPCG-SGS-C--- 273
+ PK F+G V N E + + V+ V + C+ P G SG C
Sbjct: 1063 VSGPKCICPPGFVGDDCSVDYNECEGHYCQNGARCVDHV-AGYTCVC-PAGYSGRLCEAS 1120
Query: 274 VPLYDGYKCVCTQSCKESHLTEV-MCASFDHGASFLHYLDPEIIHSSGLLHYKFQLHVDF 332
V D +CV C+E T V C +G L I Y L
Sbjct: 1121 VSACDLLQCVNGAPCEEISGTAVCQCLPGFNGLRCEKLLSVNFIDRDS---YLLLLRDAT 1177
Query: 333 RITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQ 392
+ T NI +++ T+ +G++L+ G ++ +A+ +H+G+ V Y
Sbjct: 1178 QST--HNNITLQVSTAEDNGILLYNGVNEH---IAVELHDGHVKVTYDAGRQPGSTIYSS 1232
Query: 393 TKINNGVWHRL---TVHRNFMVVMHGSSHTRSNKSSKIE 428
+N+G +H + T R + + G T + S I+
Sbjct: 1233 EIVNDGQFHTVELVTYERMVNLSIDGGLPTTLDSSGHIQ 1271
Score = 81 (33.6 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 47 CNKTPCEHGGKCITTPGSSY-CLCPLGFTGDLCQ 79
C+ PC++ G+C P Y C CP G+ G C+
Sbjct: 928 CSSNPCQNQGRCHNDPLHQYKCSCPQGYKGRNCE 961
Score = 75 (31.5 bits), Expect = 1.9e-07, Sum P(3) = 1.9e-07
Identities = 24/75 (32%), Positives = 37/75 (49%)
Query: 458 SGGKFEQLNTDSGLYVGGV-EDIEELTRSKYH----HSFKGWISNLILSNDYQVKLPLSR 512
S G + L D+ LYVGG+ E+ + L+ + + SF+G I NL ++N+ Q
Sbjct: 1266 SSGHIQPLTRDAPLYVGGMPENAKSLSSNHWPPVNGSSFQGCIRNLYINNELQDFTQTQM 1325
Query: 513 SQG--SSCQLTCETL 525
G CQ C+ L
Sbjct: 1326 KPGVVPGCQ-ACQEL 1339
Score = 63 (27.2 bits), Expect = 0.00068, Sum P(3) = 0.00068
Identities = 15/47 (31%), Positives = 21/47 (44%)
Query: 45 DKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQT-RLDLQVPQFN 90
D C C +G C+ G+ C+C F+G C+ DL P N
Sbjct: 1005 DDCVDHQCVNGTICVDGVGNYSCVCAQPFSGQKCEEYEEDLCYPGQN 1051
Score = 60 (26.2 bits), Expect = 9.7e-05, Sum P(3) = 9.7e-05
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 267 PCGSGS-CVPLYDGYKCVC 284
PC GS C+P G KC+C
Sbjct: 1052 PCQRGSTCIPTVSGPKCIC 1070
Score = 55 (24.4 bits), Expect = 0.00030, Sum P(3) = 0.00030
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 263 CITQPCGSGS-CVPLYDGYKCVCTQ 286
C+ C +G+ CV Y CVC Q
Sbjct: 1007 CVDHQCVNGTICVDGVGNYSCVCAQ 1031
>UNIPROTKB|H3BLY1 [details] [associations]
symbol:CNTNAP3B "Contactin-associated protein-like 3B"
species:9606 "Homo sapiens" [GO:0007155 "cell adhesion"
evidence=IEA] InterPro:IPR000421 InterPro:IPR000742 Pfam:PF00754
PROSITE:PS01285 PROSITE:PS01286 PROSITE:PS50022 PROSITE:PS50026
SMART:SM00181 SMART:SM00231 INTERPRO:IPR002181 GO:GO:0007165
GO:GO:0007155 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 InterPro:IPR008979
SUPFAM:SSF49785 InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025
Gene3D:3.90.215.10 InterPro:IPR014716 SUPFAM:SSF56496
PROSITE:PS51406 Pfam:PF02210 EMBL:BX649569 EMBL:BX664735
EMBL:CR788268 HGNC:HGNC:32035 ProteinModelPortal:H3BLY1
PRIDE:H3BLY1 Ensembl:ENST00000377561 Uniprot:H3BLY1
Length = 1176
Score = 180 (68.4 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 89/362 (24%), Positives = 147/362 (40%)
Query: 64 SSYCLCPLGFTGDLCQTRLDLQVPQFNG-SSYLRYQGLGEQYLSLLDLTIVFKAIEPNGI 122
+ Y L PL GD + FN +SYL + + + D+ FK +G+
Sbjct: 825 ADYTLGPLLCRGD----KSFWNSASFNTETSYLHFPAFHGELTA--DVCFFFKTTVSSGV 878
Query: 123 LLYNGHRADGVGDFIALYLN-DRYVDFTFDLGTGAA--TLRSSNPISLGEWHKLRLTRTG 179
+ N G+ DFI + L V F+FD+G G T++S P + +WH +R R
Sbjct: 879 FMENL----GITDFIRIELRAPTEVTFSFDVGNGPCEVTVQSPTPFNDNQWHHVRAERNV 934
Query: 180 RHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLI 239
+ A LQVD+ P Q + P P + + + F+GCI+ + +
Sbjct: 935 KGASLQVDQLP--QKMQPAPADGHVRLQ------LNSQLFIGGTATRQRGFLGCIRSLQL 986
Query: 240 NNHELNILGEAIQGVNVV-NCAHPCITQP--CGSGS-CVPLYDGYKCVCTQSCKESHL-T 294
N L++ A V CA C T C +G C G C C S + +
Sbjct: 987 NGVALDLEERATVTPGVEPGCAGHCSTYGHLCRNGGRCREKRRGVTCDCAFSAYDGPFCS 1046
Query: 295 EVMCASFDHGASFLHYLDPEIIHSSGLLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLI 354
+ A F G+S ++ S L+ D +T E I + +T+ S L+
Sbjct: 1047 NEISAYFATGSSMTYHFQEHYTLSENSSSLVSSLYRDVTLTR-EM-ITLSFRTTRSPSLL 1104
Query: 355 LWTGSSQSKDFLALGI-HNGYAHVMYXXXXXXXXXXXXQTKIN--NGVWHRLTVHRNFMV 411
L+ SS +++L++ + +NG + Y N +G H++ ++R V
Sbjct: 1105 LYV-SSFYEEYLSVILANNGSLQIRYKLDRHQNPDAFTFDFKNMADGQLHQVKINREEAV 1163
Query: 412 VM 413
VM
Sbjct: 1164 VM 1165
Score = 82 (33.9 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 15/41 (36%), Positives = 24/41 (58%)
Query: 43 LEDKCNKTPCEHGGKCITTPGSSYCLC-PLGFTGDLCQTRL 82
+ D+C + CEHGG+C + + C C G+TG+ C + L
Sbjct: 596 ITDRCLPSYCEHGGECSQSWDTFSCDCLGTGYTGETCHSSL 636
Score = 39 (18.8 bits), Expect = 4.7e-09, Sum P(2) = 4.7e-09
Identities = 10/23 (43%), Positives = 11/23 (47%)
Query: 56 GKCITTPGSSYCLCPLG-FTGDL 77
G C+ S C PLG F G L
Sbjct: 541 GGCLGNSSGSGCKSPLGGFQGCL 563
>UNIPROTKB|Q96NU0 [details] [associations]
symbol:CNTNAP3B "Contactin-associated protein-like 3B"
species:9606 "Homo sapiens" [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR000421 InterPro:IPR000742 Pfam:PF00754 PROSITE:PS01285
PROSITE:PS01286 PROSITE:PS50022 PROSITE:PS50026 SMART:SM00181
SMART:SM00231 INTERPRO:IPR002181 GO:GO:0016021 GO:GO:0007165
GO:GO:0007155 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 InterPro:IPR008979 SUPFAM:SSF49785
InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025 Gene3D:3.90.215.10
InterPro:IPR014716 SUPFAM:SSF56496 PROSITE:PS00514 PROSITE:PS51406
Pfam:PF02210 EMBL:AK024257 EMBL:AK054645 EMBL:BX649569
EMBL:BX664735 EMBL:CR788268 EMBL:AL353791 IPI:IPI00255103
IPI:IPI00647097 IPI:IPI00895814 IPI:IPI00980464
RefSeq:NP_001188309.1 UniGene:Hs.521495 UniGene:Hs.604441
HSSP:O14786 ProteinModelPortal:Q96NU0 SMR:Q96NU0 PhosphoSite:Q96NU0
DMDM:190358858 PaxDb:Q96NU0 PRIDE:Q96NU0 Ensembl:ENST00000276974
Ensembl:ENST00000341990 Ensembl:ENST00000377564 GeneID:728577
KEGG:hsa:728577 UCSC:uc004abr.1 UCSC:uc004ada.2 CTD:728577
GeneCards:GC09P043624 H-InvDB:HIX0034795 H-InvDB:HIX0035297
HGNC:HGNC:32035 HPA:HPA015604 HPA:HPA047731 neXtProt:NX_Q96NU0
eggNOG:NOG314648 HOVERGEN:HBG057718 InParanoid:Q96NU0 OMA:KEERSSA
GenomeRNAi:728577 NextBio:127623 ArrayExpress:Q96NU0 Bgee:Q96NU0
CleanEx:HS_CNTNAP3B Genevestigator:Q96NU0 Uniprot:Q96NU0
Length = 1288
Score = 180 (68.4 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 89/362 (24%), Positives = 147/362 (40%)
Query: 64 SSYCLCPLGFTGDLCQTRLDLQVPQFNG-SSYLRYQGLGEQYLSLLDLTIVFKAIEPNGI 122
+ Y L PL GD + FN +SYL + + + D+ FK +G+
Sbjct: 776 ADYTLGPLLCRGD----KSFWNSASFNTETSYLHFPAFHGELTA--DVCFFFKTTVSSGV 829
Query: 123 LLYNGHRADGVGDFIALYLN-DRYVDFTFDLGTGAA--TLRSSNPISLGEWHKLRLTRTG 179
+ N G+ DFI + L V F+FD+G G T++S P + +WH +R R
Sbjct: 830 FMENL----GITDFIRIELRAPTEVTFSFDVGNGPCEVTVQSPTPFNDNQWHHVRAERNV 885
Query: 180 RHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLI 239
+ A LQVD+ P Q + P P + + + F+GCI+ + +
Sbjct: 886 KGASLQVDQLP--QKMQPAPADGHVRLQ------LNSQLFIGGTATRQRGFLGCIRSLQL 937
Query: 240 NNHELNILGEAIQGVNVV-NCAHPCITQP--CGSGS-CVPLYDGYKCVCTQSCKESHL-T 294
N L++ A V CA C T C +G C G C C S + +
Sbjct: 938 NGVALDLEERATVTPGVEPGCAGHCSTYGHLCRNGGRCREKRRGVTCDCAFSAYDGPFCS 997
Query: 295 EVMCASFDHGASFLHYLDPEIIHSSGLLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLI 354
+ A F G+S ++ S L+ D +T E I + +T+ S L+
Sbjct: 998 NEISAYFATGSSMTYHFQEHYTLSENSSSLVSSLYRDVTLTR-EM-ITLSFRTTRSPSLL 1055
Query: 355 LWTGSSQSKDFLALGI-HNGYAHVMYXXXXXXXXXXXXQTKIN--NGVWHRLTVHRNFMV 411
L+ SS +++L++ + +NG + Y N +G H++ ++R V
Sbjct: 1056 LYV-SSFYEEYLSVILANNGSLQIRYKLDRHQNPDAFTFDFKNMADGQLHQVKINREEAV 1114
Query: 412 VM 413
VM
Sbjct: 1115 VM 1116
Score = 82 (33.9 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 15/41 (36%), Positives = 24/41 (58%)
Query: 43 LEDKCNKTPCEHGGKCITTPGSSYCLC-PLGFTGDLCQTRL 82
+ D+C + CEHGG+C + + C C G+TG+ C + L
Sbjct: 547 ITDRCLPSYCEHGGECSQSWDTFSCDCLGTGYTGETCHSSL 587
Score = 39 (18.8 bits), Expect = 5.8e-09, Sum P(2) = 5.8e-09
Identities = 10/23 (43%), Positives = 11/23 (47%)
Query: 56 GKCITTPGSSYCLCPLG-FTGDL 77
G C+ S C PLG F G L
Sbjct: 492 GGCLGNSSGSGCKSPLGGFQGCL 514
>UNIPROTKB|Q6V0I7 [details] [associations]
symbol:FAT4 "Protocadherin Fat 4" species:9606 "Homo
sapiens" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007156 "homophilic
cell adhesion" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR002126
InterPro:IPR015919 InterPro:IPR018097 InterPro:IPR020894
Pfam:PF00028 Pfam:PF07645 PRINTS:PR00205 PROSITE:PS00232
PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS50268 SMART:SM00112
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0016021
GO:GO:0005886 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 eggNOG:NOG12793 InterPro:IPR001791
SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025 GO:GO:0007156
SUPFAM:SSF49313 Gene3D:2.60.40.60 HSSP:P97291 Pfam:PF02210
EMBL:AY356402 EMBL:AC079835 EMBL:AC092629 EMBL:AC098865
EMBL:AB075518 EMBL:AK026709 EMBL:AK291461 EMBL:AL713715
IPI:IPI00419327 IPI:IPI00852735 IPI:IPI00888207 RefSeq:NP_078858.4
UniGene:Hs.563205 ProteinModelPortal:Q6V0I7 SMR:Q6V0I7
IntAct:Q6V0I7 MINT:MINT-2876314 STRING:Q6V0I7 PhosphoSite:Q6V0I7
DMDM:172046149 PaxDb:Q6V0I7 PRIDE:Q6V0I7 Ensembl:ENST00000335110
Ensembl:ENST00000394329 GeneID:79633 KEGG:hsa:79633 UCSC:uc003ifi.1
UCSC:uc003ifj.4 CTD:79633 GeneCards:GC04P126237 H-InvDB:HIX0004488
HGNC:HGNC:23109 MIM:612411 neXtProt:NX_Q6V0I7 PharmGKB:PA134954366
HOGENOM:HOG000074162 HOVERGEN:HBG104800 InParanoid:Q6V0I7 KO:K16669
OMA:GKMCESS OrthoDB:EOG4HDSSK ChiTaRS:FAT4 GenomeRNAi:79633
NextBio:68741 ArrayExpress:Q6V0I7 Bgee:Q6V0I7 CleanEx:HS_FAT4
Genevestigator:Q6V0I7 Uniprot:Q6V0I7
Length = 4981
Score = 221 (82.9 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 93/401 (23%), Positives = 162/401 (40%)
Query: 37 GRSKECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQFNGSSYLR 96
G+ E + C PC +GG C + S YC CP G G C+ L F SY+
Sbjct: 3932 GKMCESSVNYCECNPCFNGGSCQSGVDSYYCHCPFGVFGKHCE----LNSYGFEELSYME 3987
Query: 97 YQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGV-GDFIALYLNDRYVDFTFDLGTG 155
+ L + + F I+ + +LLYN G +F+AL + + + F+++LG+G
Sbjct: 3988 FPSLDPNNNYIY---VKFATIKSHALLLYNYDNQTGDRAEFLALEIAEERLRFSYNLGSG 4044
Query: 156 AATLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPG-----------PFTQXX 204
L + +S G +H + R G A L VD +Q PG +T
Sbjct: 4045 TYKLTTMKKVSDGHFHTVIARRAGMAASLTVDSCSENQ--EPGYCTVSNVAVSDDWTLDV 4102
Query: 205 XXXXXXXGGVPDYN-IVSPKVKIKS-SFIGCIQKVLINNHELN-ILGEAIQGVNVVNCAH 261
GG+ I+ + ++S F+GCI + +N L A QG+ + C
Sbjct: 4103 QPNRVTVGGIRSLEPILQRRGHVESHDFVGCIMEFAVNGRPLEPSQALAAQGI-LDQCPR 4161
Query: 262 ---PCITQPCG-SGSCVPLYDGYKCVCTQS-----CKESHLTEVMCASFDHGASFLHYLD 312
C PC G+C+ + +C C + C++S +T S + G L Y
Sbjct: 4162 LEGACTRSPCQHGGTCMDYWSWQQCHCKEGLTGKYCEKS-VTPDTALSLE-GKGRLDY-- 4217
Query: 313 PEIIHSSGLLHYKFQLHVDFR---ITGYEFN-IDMRIKTSSSSGLILWTGSSQSKDFLAL 368
H S ++ L R + + N ++++ +T S +G+++ +S ++ +
Sbjct: 4218 ----HMSQNEKREYLLRQSLRGAMLEPFGVNSLEVKFRTRSENGVLIHI--QESSNYTTV 4271
Query: 369 GIHNGYAHVMYXXXXXXXXXXXX-QTKINNGVWHRLTVHRN 408
I NG + + + +G WH + +N
Sbjct: 4272 KIKNGKVYFTSDAGIAGKVERNIPEVYVADGHWHTFLIGKN 4312
Score = 151 (58.2 bits), Expect = 8.0e-06, Sum P(2) = 8.0e-06
Identities = 60/268 (22%), Positives = 99/268 (36%)
Query: 36 KGRSKEC--LEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVP-QFNGS 92
+G +C LE C ++PC+HGG C+ C C G TG C+ + G
Sbjct: 4153 QGILDQCPRLEGACTRSPCQHGGTCMDYWSWQQCHCKEGLTGKYCEKSVTPDTALSLEGK 4212
Query: 93 SYLRYQ-GLGEQYLSLLDLTIVFKAIEPNGI----LLYNGHRADGV-------GDFIALY 140
L Y E+ LL ++ +EP G+ + + +GV ++ +
Sbjct: 4213 GRLDYHMSQNEKREYLLRQSLRGAMLEPFGVNSLEVKFRTRSENGVLIHIQESSNYTTVK 4272
Query: 141 LNDRYVDFTFDLGTGAATLRSSNPISL--GEWHKLRLTRTGRHAYLQVDRFPSSQILSPG 198
+ + V FT D G R+ + + G WH + + G L VDR + I+ P
Sbjct: 4273 IKNGKVYFTSDAGIAGKVERNIPEVYVADGHWHTFLIGKNGTATVLSVDRIYNRDIIHPT 4332
Query: 199 PFTQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVN 258
GG+P N + + F GCI + L G+ + ++
Sbjct: 4333 QDFGGLDVLTISLGGIPP-NQAHRDAQT-AGFDGCIASMWYGGESLPFSGK--HSLASIS 4388
Query: 259 CAHPCITQPC-GSGSCV--PLYDGYKCV 283
P + C G C P + C+
Sbjct: 4389 KTDPSVKIGCRGPNICASNPCWGDLLCI 4416
Score = 51 (23.0 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 45 DKCNKTPCEHGGKCI 59
D C PC++GG C+
Sbjct: 3804 DSCVHGPCQNGGSCL 3818
>FB|FBgn0015609 [details] [associations]
symbol:CadN "Cadherin-N" species:7227 "Drosophila
melanogaster" [GO:0005911 "cell-cell junction" evidence=IDA]
[GO:0016021 "integral to membrane" evidence=ISS] [GO:0007156
"homophilic cell adhesion" evidence=ISS;IDA] [GO:0005886 "plasma
membrane" evidence=ISS;IDA;TAS] [GO:0016339 "calcium-dependent
cell-cell adhesion" evidence=ISS;IPI] [GO:0005515 "protein binding"
evidence=IPI] [GO:0007413 "axonal fasciculation" evidence=TAS]
[GO:0050839 "cell adhesion molecule binding" evidence=ISS]
[GO:0005887 "integral to plasma membrane" evidence=ISS] [GO:0004872
"receptor activity" evidence=ISS] [GO:0007155 "cell adhesion"
evidence=NAS] [GO:0007412 "axon target recognition" evidence=IMP]
[GO:0008013 "beta-catenin binding" evidence=NAS] [GO:0007411 "axon
guidance" evidence=IGI;IMP;NAS] [GO:0050774 "negative regulation of
dendrite morphogenesis" evidence=IMP] [GO:0048846 "axon extension
involved in axon guidance" evidence=IMP] [GO:0016318 "ommatidial
rotation" evidence=IMP] [GO:0045463 "R8 cell development"
evidence=IMP] [GO:0044331 "cell-cell adhesion mediated by cadherin"
evidence=IDA] [GO:0045467 "R7 cell development" evidence=IMP]
[GO:0031290 "retinal ganglion cell axon guidance" evidence=IMP]
[GO:0048841 "regulation of axon extension involved in axon
guidance" evidence=IMP] [GO:0048675 "axon extension" evidence=IMP]
[GO:0048814 "regulation of dendrite morphogenesis" evidence=IMP]
[GO:0045296 "cadherin binding" evidence=IPI] [GO:0005509 "calcium
ion binding" evidence=IDA] [GO:0042803 "protein homodimerization
activity" evidence=IPI] InterPro:IPR000233 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR002126 InterPro:IPR015919
InterPro:IPR020894 Pfam:PF00008 Pfam:PF00028 Pfam:PF01049
PRINTS:PR00205 PROSITE:PS00232 PROSITE:PS50026 PROSITE:PS50268
SMART:SM00112 SMART:SM00179 SMART:SM00181 GO:GO:0050774
GO:GO:0005887 EMBL:AE014134 GO:GO:0045467 GO:GO:0005509
GO:GO:0004872 GO:GO:0005911 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 GO:GO:0050839 InterPro:IPR001791
SMART:SM00282 PROSITE:PS50025 GO:GO:0016339 GO:GO:0008013
GO:GO:0007413 GO:GO:0007156 SUPFAM:SSF49313 GO:GO:0007412
GO:GO:0031290 Gene3D:2.60.40.60 GeneTree:ENSGT00700000104156
GO:GO:0044331 GO:GO:0016318 Pfam:PF02210 GO:GO:0048846
GO:GO:0045463 EMBL:AB002397 PIR:T00021 RefSeq:NP_724068.1
RefSeq:NP_724069.1 RefSeq:NP_724070.1 RefSeq:NP_724071.1
RefSeq:NP_724072.1 RefSeq:NP_724073.1 RefSeq:NP_724074.1
RefSeq:NP_724075.1 PDB:3UBF PDB:3UBG PDB:3UBH PDBsum:3UBF
PDBsum:3UBG PDBsum:3UBH ProteinModelPortal:O15943 SMR:O15943
IntAct:O15943 MINT:MINT-1327969 STRING:O15943 PaxDb:O15943
PRIDE:O15943 EnsemblMetazoa:FBtr0081015 GeneID:35070
KEGG:dme:Dmel_CG7100 CTD:35070 FlyBase:FBgn0015609 eggNOG:NOG298859
InParanoid:O15943 OrthoDB:EOG41ZCRN GenomeRNAi:35070 NextBio:791671
Bgee:O15943 GermOnline:CG7100 GO:GO:0048676 GO:GO:0048841
Uniprot:O15943
Length = 3097
Score = 204 (76.9 bits), Expect = 2.7e-13, Sum P(2) = 2.7e-13
Identities = 54/184 (29%), Positives = 84/184 (45%)
Query: 45 DKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQY 104
+ C TPC +GG+C+ T +C CP+G+TG CQ F G+ + Y L +
Sbjct: 2344 ESCRTTPCHNGGRCVDTRFGPHCSCPVGYTGPRCQQT----TRSFRGNGWAWYPPL--EM 2397
Query: 105 LSLLDLTIVFKAIEPNGILLYNG-----HRADG-VGDFIALYLNDRYVDFTFDLGTGAAT 158
L++ F +P+G+++YNG R + + DFIAL L Y D G+G
Sbjct: 2398 CDESHLSLEFITRKPDGLIIYNGPIVPPERDETLISDFIALELERGYPRLLIDFGSGTLE 2457
Query: 159 LRSSNPISL--GEWHKLRLTRTGRHAYLQVDRFPSSQI--LSPGPFTQXXXXXXXXXGGV 214
LR +L GEWH++ L + VD S++I + G + G +
Sbjct: 2458 LRVKTKKTLDDGEWHRIDLFWDTESIRMVVDFCKSAEIAEMEDGTPPEFDDMSCQARGQI 2517
Query: 215 PDYN 218
P +N
Sbjct: 2518 PPFN 2521
Score = 64 (27.6 bits), Expect = 2.7e-13, Sum P(2) = 2.7e-13
Identities = 32/182 (17%), Positives = 64/182 (35%)
Query: 230 FIGCIQKVLINNHELNILGEAIQGVNVVNCAHPCITQPCG-SGSCVPLYDGYKCVCTQSC 288
F GCI+ ++ N+ ++ + +V C P + C + + ++ CV + S
Sbjct: 2556 FDGCIRNLVHNSKLYDLAHPGLSRNSVAGC--PQTEEVCAQTETTARCWEHGNCVGSLSE 2613
Query: 289 KESHLTEVMCASFDHGASFLHYLDPEIIHSSGLLHYKFQLHVDFRITGYEFNIDMRIKTS 348
H C G + P + + Y D + + +R +T
Sbjct: 2614 ARCH-----CRPGWTGPACNIPTIPTTFKAQSYVKYALSFEPD----RFSTQVQLRFRTR 2664
Query: 349 SSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTK---INNGVWHRLTV 405
G + ++++ L I +G+ H Y +N+G WH + V
Sbjct: 2665 EEYGELFRVSDQHNREYGILEIKDGHLHFRYNLNSLRTEEKDLWLNAIVVNDGQWHVVKV 2724
Query: 406 HR 407
+R
Sbjct: 2725 NR 2726
Score = 47 (21.6 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 262 PCITQPCGSG-SCVPLYDGYKCVC 284
PC C CV L++ Y+C C
Sbjct: 2827 PCSNVICPDPFECVDLWNVYECTC 2850
>UNIPROTKB|F5GYC7 [details] [associations]
symbol:NRXN1 "Neurexin-1-beta" species:9606 "Homo sapiens"
[GO:0007269 "neurotransmitter secretion" evidence=IEA] [GO:0007416
"synapse assembly" evidence=IEA] [GO:0051965 "positive regulation
of synapse assembly" evidence=IEA] [GO:0090129 "positive regulation
of synapse maturation" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR000742 InterPro:IPR027158
PROSITE:PS50026 SMART:SM00181 InterPro:IPR000152 GO:GO:0016021
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 InterPro:IPR001791 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 Pfam:PF02210 InterPro:IPR003585 SMART:SM00294
PANTHER:PTHR10127:SF309 EMBL:AC007462 EMBL:AC007682 EMBL:AC009234
EMBL:AC068725 EMBL:AC069550 EMBL:AC078994 EMBL:AC068715
HGNC:HGNC:8008 ChiTaRS:NRXN1 EMBL:AC007560 IPI:IPI00893903
ProteinModelPortal:F5GYC7 SMR:F5GYC7 Ensembl:ENST00000402717
ArrayExpress:F5GYC7 Bgee:F5GYC7 Uniprot:F5GYC7
Length = 1499
Score = 204 (76.9 bits), Expect = 3.0e-12, Sum P(2) = 3.0e-12
Identities = 84/322 (26%), Positives = 138/322 (42%)
Query: 92 SSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFD 151
SSY+ L + Y S+ L FK +G++LYN DG DFI + L Y+ + FD
Sbjct: 905 SSYVALATL-QAYTSM-HLFFQFKTTSLDGLILYNS--GDG-NDFIVVELVKGYLHYVFD 959
Query: 152 LGTGAATLR-SSN-PISLGEWHKLRLTRTGRHAY-LQVDRFPSSQILSPGPFTQXXXXXX 208
LG GA ++ SSN P++ +WH + ++R + + +++D ++QI +
Sbjct: 960 LGNGANLIKGSSNKPLNDNQWHNVMISRDTSNLHTVKIDTKITTQITAGA--RNLDLKSD 1017
Query: 209 XXXGGVPDYNIVS-PK-VKIKSSFIGCIQKVLINNHELNILGEAI--QGVNVVNCAHP-- 262
GGV S PK V K F GC+ V +N +++ +A+ G C P
Sbjct: 1018 LYIGGVAKETYKSLPKLVHAKEGFQGCLASVDLNGRLPDLISDALFCNGQIERGCEGPST 1077
Query: 263 -CITQPCGS-GSCVPLYDGYKCVCTQSCKESHLTEVMCASFDHGASFLHYLDPEIIHSSG 320
C C + G C+ +DG+ C C+ + L C D G +++ G
Sbjct: 1078 TCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPL----CN--DPGTTYI------FSKGGG 1125
Query: 321 LLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSK-DFLALGIHNGYAHVMY 379
+ YK+ + D T + + + T +++ SS D+L L IH G V +
Sbjct: 1126 QITYKWPPN-DRPSTRAD-RLAIGFSTVQKEAVLVRVDSSSGLGDYLELHIHQGKIGVKF 1183
Query: 380 XXXXXXXXXXXXQTKINNGVWH 401
IN+G +H
Sbjct: 1184 NVGTDDIAIEESNAIINDGKYH 1205
Score = 155 (59.6 bits), Expect = 2.7e-13, Sum P(4) = 2.7e-13
Identities = 45/177 (25%), Positives = 84/177 (47%)
Query: 75 GDLCQT-RLDLQVPQFNGSSYLRYQGLGEQYLSLLD-LTIVFKAIEPNGILLYNGHRADG 132
GD ++ R + + F GS Y Y S D +T+ FK ++ NG++L+ G AD
Sbjct: 271 GDQAKSKRKEEYIATFKGSEYFCYDLSQNPIQSSSDEITLSFKTLQRNGLMLHTGKSAD- 329
Query: 133 VGDFIALYLNDRYVDFTFDLGTGA--ATLRSSN-PISLGEWHKLRLTRTGRHAYLQVDRF 189
++ L L + V +LG+GA A + N + WH +++TR R + VD
Sbjct: 330 ---YVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNAWHDVKVTRNLRQVTISVDGI 386
Query: 190 PSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNI 246
++ + +T GG P + P + ++F+GC+++V+ N+++ +
Sbjct: 387 LTTTGYTQEDYTMLGSDDFFYVGGSPSTADL-PGSPVSNNFMGCLKEVVYKNNDVRL 442
Score = 146 (56.5 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 43/159 (27%), Positives = 76/159 (47%)
Query: 36 KGRSKECLEDKCNKTPCEHGGKCITTPGSSYCLCPL-GFTGDLCQTRLDLQVPQFNGSSY 94
+G S C ED C+ G C+ C C + F+G LC + G
Sbjct: 1073 EGPSTTCQEDSCSNQ-----GVCLQQWDGFSCDCSMTSFSGPLCNDPGTTYIFS-KGGGQ 1126
Query: 95 LRYQGL-GEQYLSLLD-LTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDL 152
+ Y+ ++ + D L I F ++ +L+ + G+GD++ L+++ + F++
Sbjct: 1127 ITYKWPPNDRPSTRADRLAIGFSTVQKEAVLV-RVDSSSGLGDYLELHIHQGKIGVKFNV 1185
Query: 153 GTGAATLRSSNPI-SLGEWHKLRLTRTGRHAYLQVDRFP 190
GT + SN I + G++H +R TR+G +A LQVD +P
Sbjct: 1186 GTDDIAIEESNAIINDGKYHVVRFTRSGGNATLQVDSWP 1224
Score = 132 (51.5 bits), Expect = 8.4e-11, Sum P(4) = 8.4e-11
Identities = 62/279 (22%), Positives = 116/279 (41%)
Query: 114 FKAIEPNGILLYN-G---HRADGVG------DFIALYLNDRYVDFTFDLGTGAATLRSS- 162
F+ EPNG++L++ G H+ D DF A+ + D ++ D+G+G +++
Sbjct: 500 FRTTEPNGLILFSHGKPRHQKDAKHPQMIKVDFFAIEMLDGHLYLLLDMGSGTIKIKALL 559
Query: 163 NPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYN--IV 220
++ GEW+ + R GR + V+ + +PG GG+P+ +V
Sbjct: 560 KKVNDGEWYHVDFQRDGRSGTISVNTL-RTPYTAPGESEILDLDDELYLGGLPENKAGLV 618
Query: 221 SPK----VKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNCAHPCITQPCGSGSCVPL 276
P + ++GCI+ + I+ +I Q V + A + C + P
Sbjct: 619 FPTEVWTALLNYGYVGCIRDLFIDGQSKDIR----QMAEVQSTAG--VKPSCSKETAKPC 672
Query: 277 YDGYKCVCTQSCKESHLTEVM-CASFDH-GASFLHYLDPEIIHSSGLLHYKFQLHVDFRI 334
C C++ V C+ + G S + ++ G + K QL V
Sbjct: 673 LSN-PCKNNGMCRDGWNRYVCDCSGTGYLGRSCER--EATVLSYDGSMFMKIQLPVVMH- 728
Query: 335 TGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNG 373
T E ++ +R ++ + G+++ T S S D L L + G
Sbjct: 729 TEAE-DVSLRFRSQRAYGILMATTSRDSADTLRLELDAG 766
Score = 119 (46.9 bits), Expect = 6.7e-09, Sum P(3) = 6.7e-09
Identities = 52/212 (24%), Positives = 88/212 (41%)
Query: 39 SKECLEDKCNKTPCEHGGKCITTPGSSYCLCP-LGFTGDLCQTRLDLQVPQFNGSSYLRY 97
SKE + C PC++ G C C C G+ G C+ + V ++GS +++
Sbjct: 665 SKETAKP-CLSNPCKNNGMCRDGWNRYVCDCSGTGYLGRSCER--EATVLSYDGSMFMKI 721
Query: 98 QGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDL----- 152
Q + D+++ F++ GIL+ R D D + L L+ V T +L
Sbjct: 722 QLPVVMHTEAEDVSLRFRSQRAYGILMATTSR-DSA-DTLRLELDAGRVKLTVNLDCIRI 779
Query: 153 ----GTGAATLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXX 208
G TL + ++ EWH +R+ R G+ L VD + G T+
Sbjct: 780 NCNSSKGPETLFAGYNLNDNEWHTVRVVRRGKSLKLTVDDQQAMTGQMAGDHTRLEFHNI 839
Query: 209 XXXGGVPDYNIVSPKVKIKSSFIGCIQKVLIN 240
G + + +S + S+FIG +Q + N
Sbjct: 840 ET-GIITERRYLS---SVPSNFIGHLQSLTFN 867
Score = 91 (37.1 bits), Expect = 6.1e-06, Sum P(3) = 6.1e-06
Identities = 42/198 (21%), Positives = 77/198 (38%)
Query: 56 GKCITTPGSSYCLC-PLGFTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQYLSLLDLTIVF 114
G + G + LC L G + L+ P G + R+ S +++
Sbjct: 2 GTALLQRGGCFLLCLSLLLLGCWAELGSGLEFPGAEGQ-WTRFPKWNACCES--EMSFQL 58
Query: 115 KAIEPNGILLYNGHRADGVGDFIALYLN-DRYVDFTFDLGTGA-ATLRSSNPISLGEWHK 172
K G++LY +G DF+ L L + +F + ATL + P++ G WH
Sbjct: 59 KTRSARGLVLYFDD--EGFCDFLELILTRGGRLQLSFSIFCAEPATLLADTPVNDGAWHS 116
Query: 173 LRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPD------YNIVSPKVKI 226
+R+ R R+ L +D+ + + GG+P + V+
Sbjct: 117 VRIRRQFRNTTLFIDQVEAKWVEVKSKRRDMTVFSGLFVGGLPPELRAAALKLTLASVRE 176
Query: 227 KSSFIGCIQKVLINNHEL 244
+ F G I+ V +N+ ++
Sbjct: 177 REPFKGWIRDVRVNSSQV 194
Score = 84 (34.6 bits), Expect = 2.7e-13, Sum P(4) = 2.7e-13
Identities = 18/66 (27%), Positives = 31/66 (46%)
Query: 344 RIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTK-INNGVWHR 402
+ KT+S GLIL+ S DF+ + + GY H ++ K +N+ WH
Sbjct: 924 QFKTTSLDGLILYN-SGDGNDFIVVELVKGYLHYVFDLGNGANLIKGSSNKPLNDNQWHN 982
Query: 403 LTVHRN 408
+ + R+
Sbjct: 983 VMISRD 988
Score = 75 (31.5 bits), Expect = 6.1e-06, Sum P(3) = 6.1e-06
Identities = 20/77 (25%), Positives = 36/77 (46%)
Query: 436 RLHRTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVEDIEELTRSKYHHSFKGWI 495
++ R +Q I +D + + + L +D YVGG +L S ++F G +
Sbjct: 371 KVTRNLRQVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGCL 430
Query: 496 SNLILSNDYQVKLPLSR 512
++ N+ V+L LSR
Sbjct: 431 KEVVYKNN-DVRLELSR 446
Score = 74 (31.1 bits), Expect = 6.1e-06, Sum P(3) = 6.1e-06
Identities = 21/74 (28%), Positives = 32/74 (43%)
Query: 341 IDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQT--KINNG 398
I + KT +GL+L TG +S D++ L + NG ++ K N+
Sbjct: 308 ITLSFKTLQRNGLMLHTG--KSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDN 365
Query: 399 VWHRLTVHRNFMVV 412
WH + V RN V
Sbjct: 366 AWHDVKVTRNLRQV 379
Score = 65 (27.9 bits), Expect = 2.7e-13, Sum P(4) = 2.7e-13
Identities = 25/88 (28%), Positives = 38/88 (43%)
Query: 446 IRIDTDYSMQSISGGKFEQLNTDSGLYVGGVEDIEELTRSKYHHSFKGWISNLILSNDYQ 505
++IDT + Q +G + L+ S LY+GGV + K H+ +G+ + S D
Sbjct: 995 VKIDTKITTQITAGAR--NLDLKSDLYIGGVAKETYKSLPKLVHAKEGF-QGCLASVDLN 1051
Query: 506 VKLPLSRSQGSSCQLTCETLNTG-QVTC 532
+LP S C E G TC
Sbjct: 1052 GRLPDLISDALFCNGQIERGCEGPSTTC 1079
Score = 51 (23.0 bits), Expect = 5.1e-10, Sum P(4) = 5.1e-10
Identities = 9/45 (20%), Positives = 21/45 (46%)
Query: 364 DFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGVWHRLTVHRN 408
DF A+ + +G+ +++ K+N+G W+ + R+
Sbjct: 531 DFFAIEMLDGHLYLLLDMGSGTIKIKALLKKVNDGEWYHVDFQRD 575
Score = 47 (21.6 bits), Expect = 2.7e-13, Sum P(4) = 2.7e-13
Identities = 14/54 (25%), Positives = 21/54 (38%)
Query: 27 IQLNDGNKIKGRSKEC-LEDKCNKTPCEHGGKCITTPGSSYCLCP-LGFTGDLC 78
++L+D G C ++ C +GG C + C C GF G C
Sbjct: 202 VKLDDEPPNSGGGSPCEAGEEGEGGVCLNGGVCSVVDDQAVCDCSRTGFRGKDC 255
Score = 47 (21.6 bits), Expect = 3.1e-07, Sum P(3) = 3.1e-07
Identities = 15/51 (29%), Positives = 27/51 (52%)
Query: 428 EFKCLSIQRLHRTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVED 478
E+ + QR R+G + + T Y+ + G+ E L+ D LY+GG+ +
Sbjct: 566 EWYHVDFQRDGRSGTISVNTLRTPYT----APGESEILDLDDELYLGGLPE 612
Score = 41 (19.5 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 8/28 (28%), Positives = 16/28 (57%)
Query: 11 DDWNTVRVFRHRWDAWIQLNDGNKIKGR 38
++W+TVRV R + ++D + G+
Sbjct: 799 NEWHTVRVVRRGKSLKLTVDDQQAMTGQ 826
>UNIPROTKB|F1MMZ4 [details] [associations]
symbol:NRXN1 "Neurexin-1-beta" species:9913 "Bos taurus"
[GO:0090129 "positive regulation of synapse maturation"
evidence=IEA] [GO:0051965 "positive regulation of synapse assembly"
evidence=IEA] [GO:0007416 "synapse assembly" evidence=IEA]
[GO:0007269 "neurotransmitter secretion" evidence=IEA]
InterPro:IPR000742 InterPro:IPR027158 PROSITE:PS50026 SMART:SM00181
InterPro:IPR000152 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 Pfam:PF02210
GeneTree:ENSGT00560000076996 PANTHER:PTHR10127:SF309
EMBL:DAAA02030804 EMBL:DAAA02030805 EMBL:DAAA02030806
EMBL:DAAA02030807 IPI:IPI00924356 Ensembl:ENSBTAT00000061495
Uniprot:F1MMZ4
Length = 836
Score = 188 (71.2 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 61/207 (29%), Positives = 99/207 (47%)
Query: 92 SSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFD 151
SSY+ L + Y S+ L FK +G++LYN DG DFI + L Y+ + FD
Sbjct: 628 SSYVALATL-QAYTSM-HLFFQFKTTSLDGLILYNS--GDG-NDFIVVELVKGYLHYVFD 682
Query: 152 LGTGAATLR-SSN-PISLGEWHKLRLTRTGRHAY-LQVDRFPSSQILSPGPFTQXXXXXX 208
LG GA ++ SSN P++ +WH + ++R + + +++D ++QI +
Sbjct: 683 LGNGANLIKGSSNKPLNDNQWHNVMISRDTSNLHTVKIDTKITTQITAGA--RNLDLKSD 740
Query: 209 XXXGGVPDYNIVS-PK-VKIKSSFIGCIQKVLINNHELNILGEAI--QGVNVVNCAHP-- 262
GGV S PK V K F GC+ V +N +++ +A+ G C P
Sbjct: 741 LYIGGVAKETYKSLPKLVHAKEGFQGCLASVDLNGRLPDLISDALFCNGQIERGCEGPST 800
Query: 263 -CITQPCGS-GSCVPLYDGYKCVCTQS 287
C C + G C+ +DG+ C C+ +
Sbjct: 801 TCQEDSCSNQGVCLQQWDGFSCDCSMT 827
Score = 151 (58.2 bits), Expect = 3.1e-13, Sum P(3) = 3.1e-13
Identities = 42/165 (25%), Positives = 78/165 (47%)
Query: 86 VPQFNGSSYLRYQGLGEQYLSLLD-LTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDR 144
+ F GS Y Y S D +T+ FK ++ NG++L+ G AD ++ L L +
Sbjct: 6 IATFKGSEYFCYDLSQNPIQSSSDEITLSFKTLQRNGLMLHTGKSAD----YVNLALKNG 61
Query: 145 YVDFTFDLGTGA--ATLRSSN-PISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFT 201
V +LG+GA A + N + WH +++TR R + VD ++ + +T
Sbjct: 62 AVSLVINLGSGAFEALVEPVNGKFNDNAWHDVKVTRNLRQVTISVDGILTTTGYTQEDYT 121
Query: 202 QXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNI 246
GG P + P + ++F+GC+++V+ N+++ +
Sbjct: 122 MLGSDDFFYVGGSPSTADL-PGSPVSNNFMGCLKEVVYKNNDVRL 165
Score = 133 (51.9 bits), Expect = 2.9e-11, Sum P(3) = 2.9e-11
Identities = 62/279 (22%), Positives = 116/279 (41%)
Query: 114 FKAIEPNGILLYN-G---HRADGVG------DFIALYLNDRYVDFTFDLGTGAATLRS-S 162
F+ EPNG++L++ G H+ D DF A+ + D ++ D+G+G +++
Sbjct: 223 FRTTEPNGLILFSHGKPRHQKDAKHPQMIKVDFFAIEMLDGHLYLLLDMGSGTIKIKALQ 282
Query: 163 NPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYN--IV 220
++ GEW+ + R GR + V+ + +PG GG+P+ +V
Sbjct: 283 KKVNDGEWYHVDFQRDGRSGTISVNTL-RTPYTAPGESEILDLDDELYLGGLPENKAGLV 341
Query: 221 SPK----VKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNCAHPCITQPCGSGSCVPL 276
P + ++GCI+ + I+ +I Q V + A + C + P
Sbjct: 342 FPTEVWTALLNYGYVGCIRDLFIDGQSKDIR----QMAEVQSTAG--VKPSCSRETAKPC 395
Query: 277 YDGYKCVCTQSCKESHLTEVM-CASFDH-GASFLHYLDPEIIHSSGLLHYKFQLHVDFRI 334
C C++ V C+ + G S + ++ G + K QL V
Sbjct: 396 LSN-PCKNNGMCRDGWNRYVCDCSGTGYLGRSCER--EATVLSYDGSMFMKIQLPVVMH- 451
Query: 335 TGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNG 373
T E ++ +R ++ + G+++ T S S D L L + G
Sbjct: 452 TEAE-DVSLRFRSQRAYGILMATTSRDSADTLRLELDAG 489
Score = 116 (45.9 bits), Expect = 2.0e-09, Sum P(3) = 2.0e-09
Identities = 49/204 (24%), Positives = 84/204 (41%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCP-LGFTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQYL 105
C PC++ G C C C G+ G C+ + V ++GS +++ Q +
Sbjct: 395 CLSNPCKNNGMCRDGWNRYVCDCSGTGYLGRSCER--EATVLSYDGSMFMKIQLPVVMHT 452
Query: 106 SLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDL---------GTGA 156
D+++ F++ GIL+ R D D + L L+ V T +L G
Sbjct: 453 EAEDVSLRFRSQRAYGILMATTSR-DSA-DTLRLELDAGRVKLTVNLDCIRINCNSSKGP 510
Query: 157 ATLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPD 216
TL + ++ EWH +R+ R G+ L VD + G T+ G + +
Sbjct: 511 ETLFAGYNLNDNEWHTVRVVRRGKSLKLTVDDQQAMTGQMAGDHTRLEFHNIET-GIITE 569
Query: 217 YNIVSPKVKIKSSFIGCIQKVLIN 240
+S + S+FIG +Q + N
Sbjct: 570 RRYLS---SVPSNFIGHLQSLTFN 590
Score = 84 (34.6 bits), Expect = 3.1e-13, Sum P(3) = 3.1e-13
Identities = 18/66 (27%), Positives = 31/66 (46%)
Query: 344 RIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTK-INNGVWHR 402
+ KT+S GLIL+ S DF+ + + GY H ++ K +N+ WH
Sbjct: 647 QFKTTSLDGLILYN-SGDGNDFIVVELVKGYLHYVFDLGNGANLIKGSSNKPLNDNQWHN 705
Query: 403 LTVHRN 408
+ + R+
Sbjct: 706 VMISRD 711
Score = 65 (27.9 bits), Expect = 3.1e-13, Sum P(3) = 3.1e-13
Identities = 25/88 (28%), Positives = 38/88 (43%)
Query: 446 IRIDTDYSMQSISGGKFEQLNTDSGLYVGGVEDIEELTRSKYHHSFKGWISNLILSNDYQ 505
++IDT + Q +G + L+ S LY+GGV + K H+ +G+ + S D
Sbjct: 718 VKIDTKITTQITAGAR--NLDLKSDLYIGGVAKETYKSLPKLVHAKEGF-QGCLASVDLN 774
Query: 506 VKLPLSRSQGSSCQLTCETLNTG-QVTC 532
+LP S C E G TC
Sbjct: 775 GRLPDLISDALFCNGQIERGCEGPSTTC 802
Score = 58 (25.5 bits), Expect = 1.3e-10, Sum P(3) = 1.3e-10
Identities = 10/45 (22%), Positives = 22/45 (48%)
Query: 364 DFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGVWHRLTVHRN 408
DF A+ + +G+ +++ Q K+N+G W+ + R+
Sbjct: 254 DFFAIEMLDGHLYLLLDMGSGTIKIKALQKKVNDGEWYHVDFQRD 298
Score = 47 (21.6 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 15/51 (29%), Positives = 27/51 (52%)
Query: 428 EFKCLSIQRLHRTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVED 478
E+ + QR R+G + + T Y+ + G+ E L+ D LY+GG+ +
Sbjct: 289 EWYHVDFQRDGRSGTISVNTLRTPYT----APGESEILDLDDELYLGGLPE 335
Score = 41 (19.5 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 8/28 (28%), Positives = 16/28 (57%)
Query: 11 DDWNTVRVFRHRWDAWIQLNDGNKIKGR 38
++W+TVRV R + ++D + G+
Sbjct: 522 NEWHTVRVVRRGKSLKLTVDDQQAMTGQ 549
>UNIPROTKB|F1M3K8 [details] [associations]
symbol:F1M3K8 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0007269 "neurotransmitter secretion"
evidence=IEA] [GO:0007416 "synapse assembly" evidence=IEA]
[GO:0051965 "positive regulation of synapse assembly" evidence=IEA]
[GO:0090129 "positive regulation of synapse maturation"
evidence=IEA] InterPro:IPR000742 InterPro:IPR027158 PROSITE:PS50026
SMART:SM00181 InterPro:IPR000152 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
InterPro:IPR001791 SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025
Pfam:PF02210 GeneTree:ENSGT00560000076996 PANTHER:PTHR10127:SF309
IPI:IPI00208055 Ensembl:ENSRNOT00000050128 ArrayExpress:F1M3K8
Uniprot:F1M3K8
Length = 836
Score = 188 (71.2 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 61/207 (29%), Positives = 99/207 (47%)
Query: 92 SSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFD 151
SSY+ L + Y S+ L FK +G++LYN DG DFI + L Y+ + FD
Sbjct: 628 SSYVALATL-QAYTSM-HLFFQFKTTSLDGLILYNS--GDG-NDFIVVELVKGYLHYVFD 682
Query: 152 LGTGAATLR-SSN-PISLGEWHKLRLTRTGRHAY-LQVDRFPSSQILSPGPFTQXXXXXX 208
LG GA ++ SSN P++ +WH + ++R + + +++D ++QI +
Sbjct: 683 LGNGANLIKGSSNKPLNDNQWHNVMISRDTSNLHTVKIDTKITTQITAGA--RNLDLKSD 740
Query: 209 XXXGGVPDYNIVS-PK-VKIKSSFIGCIQKVLINNHELNILGEAI--QGVNVVNCAHP-- 262
GGV S PK V K F GC+ V +N +++ +A+ G C P
Sbjct: 741 LYIGGVAKETYKSLPKLVHAKEGFQGCLASVDLNGRLPDLISDALFCNGQIERGCEGPST 800
Query: 263 -CITQPCGS-GSCVPLYDGYKCVCTQS 287
C C + G C+ +DG+ C C+ +
Sbjct: 801 TCQEDSCSNQGVCLQQWDGFSCDCSMT 827
Score = 151 (58.2 bits), Expect = 3.1e-13, Sum P(3) = 3.1e-13
Identities = 42/165 (25%), Positives = 78/165 (47%)
Query: 86 VPQFNGSSYLRYQGLGEQYLSLLD-LTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDR 144
+ F GS Y Y S D +T+ FK ++ NG++L+ G AD ++ L L +
Sbjct: 6 IATFKGSEYFCYDLSQNPIQSSSDEITLSFKTLQRNGLMLHTGKSAD----YVNLALKNG 61
Query: 145 YVDFTFDLGTGA--ATLRSSN-PISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFT 201
V +LG+GA A + N + WH +++TR R + VD ++ + +T
Sbjct: 62 AVSLVINLGSGAFEALVEPVNGKFNDNAWHDVKVTRNLRQVTISVDGILTTTGYTQEDYT 121
Query: 202 QXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNI 246
GG P + P + ++F+GC+++V+ N+++ +
Sbjct: 122 MLGSDDFFYVGGSPSTADL-PGSPVSNNFMGCLKEVVYKNNDVRL 165
Score = 132 (51.5 bits), Expect = 3.7e-11, Sum P(3) = 3.7e-11
Identities = 61/279 (21%), Positives = 116/279 (41%)
Query: 114 FKAIEPNGILLYN-G---HRADGVG------DFIALYLNDRYVDFTFDLGTGAATLRS-S 162
F+ EPNG++L++ G H+ D DF A+ + D ++ D+G+G +++
Sbjct: 223 FRTTEPNGLILFSHGKPRHQKDAKHPQMIKVDFFAIEMLDGHLYLLLDMGSGTIKIKALQ 282
Query: 163 NPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYN--IV 220
++ GEW+ + R GR + V+ + +PG GG+P+ +V
Sbjct: 283 KKVNDGEWYHVDFQRDGRSGTISVNTL-RTPYTAPGESEILDLDDELYLGGLPENKAGLV 341
Query: 221 SPK----VKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNCAHPCITQPCGSGSCVPL 276
P + ++GCI+ + I+ +I Q + + A + C + P
Sbjct: 342 FPTEVWTALLNYGYVGCIRDLFIDGQSKDIR----QMAEIQSTAG--VKPSCSRETAKPC 395
Query: 277 YDGYKCVCTQSCKESHLTEVM-CASFDH-GASFLHYLDPEIIHSSGLLHYKFQLHVDFRI 334
C C++ V C+ + G S + ++ G + K QL V
Sbjct: 396 LSN-PCKNNGMCRDGWNRYVCDCSGTGYLGRSCER--EATVLSYDGSMFMKIQLPVVMH- 451
Query: 335 TGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNG 373
T E ++ +R ++ + G+++ T S S D L L + G
Sbjct: 452 TEAE-DVSLRFRSQRAYGILMATTSRDSADTLRLELDAG 489
Score = 117 (46.2 bits), Expect = 1.6e-09, Sum P(3) = 1.6e-09
Identities = 56/226 (24%), Positives = 93/226 (41%)
Query: 25 AWIQLNDGNKIKGRSKECLEDKCNKTPCEHGGKCITTPGSSYCLCP-LGFTGDLCQTRLD 83
A IQ G K S+E + C PC++ G C C C G+ G C+ +
Sbjct: 375 AEIQSTAGVK-PSCSRETAKP-CLSNPCKNNGMCRDGWNRYVCDCSGTGYLGRSCER--E 430
Query: 84 LQVPQFNGSSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLND 143
V ++GS +++ Q + D+++ F++ GIL+ R D D + L L+
Sbjct: 431 ATVLSYDGSMFMKIQLPVVMHTEAEDVSLRFRSQRAYGILMATTSR-DSA-DTLRLELDA 488
Query: 144 RYVDFTFDL---------GTGAATLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQI 194
V T +L G TL + ++ EWH +R+ R G+ L VD +
Sbjct: 489 GRVKLTVNLDCIRINCNSSKGPETLFAGYNLNDNEWHTVRVVRRGKSLKLTVDDQQAMTG 548
Query: 195 LSPGPFTQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLIN 240
G T+ G + + +S + S+FIG +Q + N
Sbjct: 549 QMAGDHTRLEFHNIET-GIITERRYLS---SVPSNFIGHLQSLTFN 590
Score = 84 (34.6 bits), Expect = 3.1e-13, Sum P(3) = 3.1e-13
Identities = 18/66 (27%), Positives = 31/66 (46%)
Query: 344 RIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTK-INNGVWHR 402
+ KT+S GLIL+ S DF+ + + GY H ++ K +N+ WH
Sbjct: 647 QFKTTSLDGLILYN-SGDGNDFIVVELVKGYLHYVFDLGNGANLIKGSSNKPLNDNQWHN 705
Query: 403 LTVHRN 408
+ + R+
Sbjct: 706 VMISRD 711
Score = 65 (27.9 bits), Expect = 3.1e-13, Sum P(3) = 3.1e-13
Identities = 25/88 (28%), Positives = 38/88 (43%)
Query: 446 IRIDTDYSMQSISGGKFEQLNTDSGLYVGGVEDIEELTRSKYHHSFKGWISNLILSNDYQ 505
++IDT + Q +G + L+ S LY+GGV + K H+ +G+ + S D
Sbjct: 718 VKIDTKITTQITAGAR--NLDLKSDLYIGGVAKETYKSLPKLVHAKEGF-QGCLASVDLN 774
Query: 506 VKLPLSRSQGSSCQLTCETLNTG-QVTC 532
+LP S C E G TC
Sbjct: 775 GRLPDLISDALFCNGQIERGCEGPSTTC 802
Score = 58 (25.5 bits), Expect = 1.3e-10, Sum P(3) = 1.3e-10
Identities = 10/45 (22%), Positives = 22/45 (48%)
Query: 364 DFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGVWHRLTVHRN 408
DF A+ + +G+ +++ Q K+N+G W+ + R+
Sbjct: 254 DFFAIEMLDGHLYLLLDMGSGTIKIKALQKKVNDGEWYHVDFQRD 298
Score = 47 (21.6 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 15/51 (29%), Positives = 27/51 (52%)
Query: 428 EFKCLSIQRLHRTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVED 478
E+ + QR R+G + + T Y+ + G+ E L+ D LY+GG+ +
Sbjct: 289 EWYHVDFQRDGRSGTISVNTLRTPYT----APGESEILDLDDELYLGGLPE 335
Score = 41 (19.5 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 8/28 (28%), Positives = 16/28 (57%)
Query: 11 DDWNTVRVFRHRWDAWIQLNDGNKIKGR 38
++W+TVRV R + ++D + G+
Sbjct: 522 NEWHTVRVVRRGKSLKLTVDDQQAMTGQ 549
>UNIPROTKB|D4AA49 [details] [associations]
symbol:D4AA49 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0007155 "cell adhesion" evidence=IEA]
InterPro:IPR000421 InterPro:IPR000742 Pfam:PF00754 PROSITE:PS01285
PROSITE:PS01286 PROSITE:PS50022 PROSITE:PS50026 SMART:SM00181
SMART:SM00231 INTERPRO:IPR002181 GO:GO:0007165 GO:GO:0007155
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 InterPro:IPR008979 SUPFAM:SSF49785
InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025 Gene3D:3.90.215.10
InterPro:IPR014716 SMART:SM00186 SUPFAM:SSF56496 PROSITE:PS51406
Pfam:PF02210 GeneTree:ENSGT00560000076804 OrthoDB:EOG4VMFDJ
IPI:IPI00568482 ProteinModelPortal:D4AA49
Ensembl:ENSRNOT00000046525 ArrayExpress:D4AA49 Uniprot:D4AA49
Length = 1289
Score = 191 (72.3 bits), Expect = 3.7e-13, Sum P(2) = 3.7e-13
Identities = 106/418 (25%), Positives = 171/418 (40%)
Query: 64 SSYCLCPLGFTGDLCQTRLDL-QVPQFNG-SSYLRYQGLGEQYLSLLDLTIVFKAIEPNG 121
++Y L PL LCQ FN +SYL + + + D+ +FK +G
Sbjct: 780 AAYTLGPL-----LCQGDKSFWNSASFNTEASYLHFPTFHGELTA--DVHFLFKTTISSG 832
Query: 122 ILLYNGHRADGVGDFIALYLN-DRYVDFTFDLGTGAA--TLRSSNPISLGEWHKLRLTRT 178
+ + N G+ DFI + L V F+FD+G G T++S P + WH +R R
Sbjct: 833 VFMENL----GITDFIRIELRAPTEVTFSFDVGNGPCELTVQSLTPFNDNRWHHVRAERN 888
Query: 179 GRHAYLQVDRFPSSQILSPGP-FTQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKV 237
+ A LQVD+ P +P + GG + F+GCI+ +
Sbjct: 889 VKGASLQVDQLPQKTQPNPADGHVRLQLNSQLFIGGTASR---------QKGFLGCIRSL 939
Query: 238 LINNHELNILGEAIQGVNVV-NCAHPCITQP--C-GSGSCVPLYDGYKCVCTQSCKESHL 293
+N L++ G AI V C C + C G C G C C S + L
Sbjct: 940 QVNGIALDLEGRAIMTPGVEPGCPGHCSSYGHLCRNGGKCQEKRRGIACDCAFSAYDGPL 999
Query: 294 -TEVMCASFDHGASFLHYLD--PEIIHSSGLLHYKFQLHVDFRITGYEFNIDMRIKTSSS 350
+ + A F+ G+S + P + ++ L LH D I E I + +T+ +
Sbjct: 1000 CSHEISAYFEMGSSVTYNFQERPPLDENTSSL--ASSLHGDV-ILSRE-TITLSFRTTQT 1055
Query: 351 SGLILWTGSSQSKDFLALGI-HNGYAHVMYXXXXXXXXXXXXQTKIN--NGVWHRLTVHR 407
L+L+ SS +++L++ + +NG V Y N +G +H+L ++R
Sbjct: 1056 PCLLLYV-SSFDEEYLSVILANNGSLQVRYKLDRHRNADAFNFDLRNLADGHFHQLMINR 1114
Query: 408 NFMVV---MHGSSHTRSNKSSKIEFKCLSIQRLHRTGKQCLIRIDTDYSMQSISGGKF 462
VV ++ S+ + SS EF + L GK L +D D Q + F
Sbjct: 1115 EEAVVSVEVNQSTKRQVILSSGTEFNAVKSLTL---GK-VLEPLDVDPETQQAAAQGF 1168
Score = 68 (29.0 bits), Expect = 3.7e-13, Sum P(2) = 3.7e-13
Identities = 13/39 (33%), Positives = 19/39 (48%)
Query: 45 DKCNKTPCEHGGKCITTPGSSYCLCP-LGFTGDLCQTRL 82
D+C CEHG C + + C C G+TG C + +
Sbjct: 554 DRCLPNYCEHGSGCTQSWDTFSCDCDGTGYTGTTCHSSI 592
>UNIPROTKB|J9NZ68 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005576 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 Pfam:PF00054 SMART:SM00274 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF12661 Pfam:PF01463
GeneTree:ENSGT00700000104083 EMBL:AAEX03002614 EMBL:AAEX03002615
EMBL:AAEX03002616 Ensembl:ENSCAFT00000044488 Uniprot:J9NZ68
Length = 1337
Score = 201 (75.8 bits), Expect = 4.5e-13, Sum P(2) = 4.5e-13
Identities = 66/247 (26%), Positives = 108/247 (43%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQYLS 106
C+ C++G +CI G C C G+ GD C+ +L + V N SYL+ +
Sbjct: 932 CDNFDCQNGAQCIVRAGEPICQCLPGYQGDKCE-KL-VSVNFVNKESYLQIPSA--KVRP 987
Query: 107 LLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTG-AATLRSSNPI 165
++T+ E +GILLY G + D IA+ L V ++D G+ A+ + S I
Sbjct: 988 QTNITLQIATDEDSGILLYKGDK-----DHIAVELYRGRVRASYDTGSHPASAIYSVETI 1042
Query: 166 SLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSPKVK 225
+ G +H + L + L VD I + + GG+P N V+ ++
Sbjct: 1043 NDGNFHIVELLALDQSLSLSVDGGSPKIITNLSKQSTLNFDSPLYVGGMPGRNNVAAALR 1102
Query: 226 IK-----SSFIGCIQKVLINNHELNILGEAIQGVNVVNCAHPCITQPCGSGSCVPL-YDG 279
+SF GCI+ + IN+ EL + ++ PC + C G+C P G
Sbjct: 1103 QAPGHNGTSFHGCIRNLYINS-ELQDFRQVPMQTGILPGCEPCHRKVCAHGACQPSSQSG 1161
Query: 280 YKCVCTQ 286
+ C C +
Sbjct: 1162 FTCECEE 1168
Score = 106 (42.4 bits), Expect = 2.2e-05, Sum P(3) = 2.2e-05
Identities = 21/65 (32%), Positives = 30/65 (46%)
Query: 26 WIQLNDGNKIKGRSKECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQ 85
W DG +G + E D C CE+ C+ + CLCP +TG+LC+ +LD
Sbjct: 790 WCICADG--FEGENCEVNVDDCEDNDCENNSTCVDGINNYTCLCPPEYTGELCEEKLDFC 847
Query: 86 VPQFN 90
N
Sbjct: 848 AQDLN 852
Score = 77 (32.2 bits), Expect = 2.2e-05, Sum P(3) = 2.2e-05
Identities = 24/96 (25%), Positives = 42/96 (43%)
Query: 340 NIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGV 399
NI ++I T SG++L+ G KD +A+ ++ G Y IN+G
Sbjct: 990 NITLQIATDEDSGILLYKGD---KDHIAVELYRGRVRASYDTGSHPASAIYSVETINDGN 1046
Query: 400 WH---RLTVHRNFMVVMHGSSH---TRSNKSSKIEF 429
+H L + ++ + + G S T +K S + F
Sbjct: 1047 FHIVELLALDQSLSLSVDGGSPKIITNLSKQSTLNF 1082
Score = 63 (27.2 bits), Expect = 0.00052, Sum P(3) = 0.00052
Identities = 25/76 (32%), Positives = 36/76 (47%)
Query: 445 LIRIDTDYSMQSISGG---------KFEQLNTDSGLYVGGV---EDIEELTRSKYHH--- 489
L+ +D S+ S+ GG K LN DS LYVGG+ ++ R H
Sbjct: 1052 LLALDQSLSL-SVDGGSPKIITNLSKQSTLNFDSPLYVGGMPGRNNVAAALRQAPGHNGT 1110
Query: 490 SFKGWISNLILSNDYQ 505
SF G I NL ++++ Q
Sbjct: 1111 SFHGCIRNLYINSELQ 1126
Score = 57 (25.1 bits), Expect = 4.5e-13, Sum P(2) = 4.5e-13
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 262 PCITQPCGSGSCVPLYD-GYKCVCTQ 286
PC+ C G+C+P+ Y C C +
Sbjct: 1182 PCLGNKCVHGTCLPINAFSYSCKCLE 1207
Score = 49 (22.3 bits), Expect = 2.2e-05, Sum P(3) = 2.2e-05
Identities = 10/27 (37%), Positives = 13/27 (48%)
Query: 267 PCGSGS-CVPLYDGYKCVCTQSCKESH 292
PC S C+ + G+KC CT H
Sbjct: 853 PCQHDSKCILMPKGFKCDCTPGYVGEH 879
Score = 48 (22.0 bits), Expect = 2.7e-05, Sum P(3) = 2.7e-05
Identities = 8/25 (32%), Positives = 12/25 (48%)
Query: 263 CITQPCGSGS-CVPLYDGYKCVCTQ 286
C C +G+ C +GY C C +
Sbjct: 887 CQDHKCKNGAHCTDAVNGYTCTCPE 911
>UNIPROTKB|F1P8A1 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005576 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 Pfam:PF00054 SMART:SM00274 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF12661 Pfam:PF01463
GeneTree:ENSGT00700000104083 CTD:9353 KO:K06839 OMA:RHKMFKG
EMBL:AAEX03002614 EMBL:AAEX03002615 EMBL:AAEX03002616
RefSeq:XP_854843.1 ProteinModelPortal:F1P8A1
Ensembl:ENSCAFT00000026343 GeneID:595148 KEGG:cfa:595148
Uniprot:F1P8A1
Length = 1530
Score = 201 (75.8 bits), Expect = 6.2e-13, Sum P(2) = 6.2e-13
Identities = 66/247 (26%), Positives = 108/247 (43%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQYLS 106
C+ C++G +CI G C C G+ GD C+ +L + V N SYL+ +
Sbjct: 1125 CDNFDCQNGAQCIVRAGEPICQCLPGYQGDKCE-KL-VSVNFVNKESYLQIPSA--KVRP 1180
Query: 107 LLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTG-AATLRSSNPI 165
++T+ E +GILLY G + D IA+ L V ++D G+ A+ + S I
Sbjct: 1181 QTNITLQIATDEDSGILLYKGDK-----DHIAVELYRGRVRASYDTGSHPASAIYSVETI 1235
Query: 166 SLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSPKVK 225
+ G +H + L + L VD I + + GG+P N V+ ++
Sbjct: 1236 NDGNFHIVELLALDQSLSLSVDGGSPKIITNLSKQSTLNFDSPLYVGGMPGRNNVAAALR 1295
Query: 226 IK-----SSFIGCIQKVLINNHELNILGEAIQGVNVVNCAHPCITQPCGSGSCVPL-YDG 279
+SF GCI+ + IN+ EL + ++ PC + C G+C P G
Sbjct: 1296 QAPGHNGTSFHGCIRNLYINS-ELQDFRQVPMQTGILPGCEPCHRKVCAHGACQPSSQSG 1354
Query: 280 YKCVCTQ 286
+ C C +
Sbjct: 1355 FTCECEE 1361
Score = 106 (42.4 bits), Expect = 3.3e-05, Sum P(3) = 3.3e-05
Identities = 21/65 (32%), Positives = 30/65 (46%)
Query: 26 WIQLNDGNKIKGRSKECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQ 85
W DG +G + E D C CE+ C+ + CLCP +TG+LC+ +LD
Sbjct: 983 WCICADG--FEGENCEVNVDDCEDNDCENNSTCVDGINNYTCLCPPEYTGELCEEKLDFC 1040
Query: 86 VPQFN 90
N
Sbjct: 1041 AQDLN 1045
Score = 77 (32.2 bits), Expect = 3.3e-05, Sum P(3) = 3.3e-05
Identities = 24/96 (25%), Positives = 42/96 (43%)
Query: 340 NIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGV 399
NI ++I T SG++L+ G KD +A+ ++ G Y IN+G
Sbjct: 1183 NITLQIATDEDSGILLYKGD---KDHIAVELYRGRVRASYDTGSHPASAIYSVETINDGN 1239
Query: 400 WH---RLTVHRNFMVVMHGSSH---TRSNKSSKIEF 429
+H L + ++ + + G S T +K S + F
Sbjct: 1240 FHIVELLALDQSLSLSVDGGSPKIITNLSKQSTLNF 1275
Score = 63 (27.2 bits), Expect = 0.00079, Sum P(3) = 0.00079
Identities = 25/76 (32%), Positives = 36/76 (47%)
Query: 445 LIRIDTDYSMQSISGG---------KFEQLNTDSGLYVGGV---EDIEELTRSKYHH--- 489
L+ +D S+ S+ GG K LN DS LYVGG+ ++ R H
Sbjct: 1245 LLALDQSLSL-SVDGGSPKIITNLSKQSTLNFDSPLYVGGMPGRNNVAAALRQAPGHNGT 1303
Query: 490 SFKGWISNLILSNDYQ 505
SF G I NL ++++ Q
Sbjct: 1304 SFHGCIRNLYINSELQ 1319
Score = 57 (25.1 bits), Expect = 6.2e-13, Sum P(2) = 6.2e-13
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 262 PCITQPCGSGSCVPLYD-GYKCVCTQ 286
PC+ C G+C+P+ Y C C +
Sbjct: 1375 PCLGNKCVHGTCLPINAFSYSCKCLE 1400
Score = 49 (22.3 bits), Expect = 3.3e-05, Sum P(3) = 3.3e-05
Identities = 10/27 (37%), Positives = 13/27 (48%)
Query: 267 PCGSGS-CVPLYDGYKCVCTQSCKESH 292
PC S C+ + G+KC CT H
Sbjct: 1046 PCQHDSKCILMPKGFKCDCTPGYVGEH 1072
Score = 48 (22.0 bits), Expect = 4.2e-05, Sum P(3) = 4.2e-05
Identities = 8/25 (32%), Positives = 12/25 (48%)
Query: 263 CITQPCGSGS-CVPLYDGYKCVCTQ 286
C C +G+ C +GY C C +
Sbjct: 1080 CQDHKCKNGAHCTDAVNGYTCTCPE 1104
>WB|WBGene00000396 [details] [associations]
symbol:cdh-4 species:6239 "Caenorhabditis elegans"
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0007156
"homophilic cell adhesion" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0007413 "axonal fasciculation"
evidence=IMP] [GO:0007163 "establishment or maintenance of cell
polarity" evidence=IMP] [GO:0007411 "axon guidance" evidence=IMP]
InterPro:IPR000742 InterPro:IPR002126 InterPro:IPR015919
InterPro:IPR020894 Pfam:PF00028 PRINTS:PR00205 PROSITE:PS00232
PROSITE:PS50026 PROSITE:PS50268 SMART:SM00112 SMART:SM00181
GO:GO:0016021 GO:GO:0005886 GO:GO:0007411 GO:GO:0007163
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 eggNOG:NOG12793 InterPro:IPR001791
SMART:SM00282 PROSITE:PS50025 GO:GO:0007413 GO:GO:0007156
SUPFAM:SSF49313 Gene3D:2.60.40.60 GeneTree:ENSGT00700000104156
Pfam:PF02210 EMBL:Z34802 EMBL:Z35599 EMBL:Z35662 PIR:T20721
RefSeq:NP_001254917.1 HSSP:P00740 ProteinModelPortal:Q19319
SMR:Q19319 STRING:Q19319 PaxDb:Q19319 EnsemblMetazoa:F25F2.2a
GeneID:175590 KEGG:cel:CELE_F25F2.2 UCSC:F25F2.2 CTD:175590
WormBase:F25F2.2a HOGENOM:HOG000021369 KO:K16506 OMA:PYEAFIV
ArrayExpress:Q19319 Uniprot:Q19319
Length = 4292
Score = 191 (72.3 bits), Expect = 6.3e-13, Sum P(2) = 6.3e-13
Identities = 77/294 (26%), Positives = 124/294 (42%)
Query: 7 QVILDDWNTVRVFRHRWDAWIQLNDGNKIKGRSKECLEDKCNKTPCEHGGKCI-TTPGSS 65
+V DD++ V F R A DG G+ E ++C K+PCE CI + S+
Sbjct: 3637 KVSTDDFSFVSPFHSR-SAQCLCPDG--FGGKRCEVETNQCAKSPCEQWQLCIPSVHNST 3693
Query: 66 Y-CLCPLGFTGDLCQT---RLD---LQVPQFN--GSSYLRYQGLGEQYLSLLDLTIVFKA 116
Y C+CPLG GD C + D L+ + + G Y L + + ++L I K
Sbjct: 3694 YECVCPLGMEGDKCSVPSCQNDGKCLEEAELSVGGDGYFEIS-LSNEIETRMELEIELKT 3752
Query: 117 IEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSNPISLGEWHKLRLT 176
NGI++++ G DF L L + ++ ++ GTG + S + G+WH++ ++
Sbjct: 3753 TTHNGIIMWSR----GKRDFHMLRLVNGTPEYHWNAGTGTGIVTSKTSVVDGQWHRIAIS 3808
Query: 177 RTGRHAYLQVDRFPSSQILSP-GP--FTQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGC 233
R R + VD + SP G G D ++ V I
Sbjct: 3809 RRQRRTRMTVDDEDLQEAFSPIGSTVINLHRYSQKLVLGAKVDDGELTDGVSACFRTISV 3868
Query: 234 I-QKVLINNHELNILGEAIQGVNVVNCAHPCITQPCG-SGSCVPLYDG-YKCVC 284
KVL + + G A G + + + PC PC +G+C+ +KC C
Sbjct: 3869 DGMKVLKTRQGMKLFG-AQPGCSALTSS-PCNDLPCQHAGTCISQGKSHFKCEC 3920
Score = 77 (32.2 bits), Expect = 6.3e-13, Sum P(2) = 6.3e-13
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 262 PCITQPCGSG-SCVPLYDGYKCVCTQSCKESH 292
PC + PC +G C+P Y+ Y C C H
Sbjct: 3935 PCASSPCPTGIQCIPFYNDYLCKCPNGFTGKH 3966
>UNIPROTKB|F1LZ16 [details] [associations]
symbol:F1LZ16 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0007269 "neurotransmitter secretion"
evidence=IEA] [GO:0007416 "synapse assembly" evidence=IEA]
[GO:0051965 "positive regulation of synapse assembly" evidence=IEA]
[GO:0090129 "positive regulation of synapse maturation"
evidence=IEA] InterPro:IPR000742 InterPro:IPR027158 PROSITE:PS50026
SMART:SM00181 InterPro:IPR000152 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
InterPro:IPR001791 SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025
Pfam:PF02210 GeneTree:ENSGT00560000076996 PANTHER:PTHR10127:SF309
IPI:IPI01016279 Ensembl:ENSRNOT00000061624 ArrayExpress:F1LZ16
Uniprot:F1LZ16
Length = 842
Score = 188 (71.2 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 61/207 (29%), Positives = 99/207 (47%)
Query: 92 SSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFD 151
SSY+ L + Y S+ L FK +G++LYN DG DFI + L Y+ + FD
Sbjct: 634 SSYVALATL-QAYTSM-HLFFQFKTTSLDGLILYNS--GDG-NDFIVVELVKGYLHYVFD 688
Query: 152 LGTGAATLR-SSN-PISLGEWHKLRLTRTGRHAY-LQVDRFPSSQILSPGPFTQXXXXXX 208
LG GA ++ SSN P++ +WH + ++R + + +++D ++QI +
Sbjct: 689 LGNGANLIKGSSNKPLNDNQWHNVMISRDTSNLHTVKIDTKITTQITAGA--RNLDLKSD 746
Query: 209 XXXGGVPDYNIVS-PK-VKIKSSFIGCIQKVLINNHELNILGEAI--QGVNVVNCAHP-- 262
GGV S PK V K F GC+ V +N +++ +A+ G C P
Sbjct: 747 LYIGGVAKETYKSLPKLVHAKEGFQGCLASVDLNGRLPDLISDALFCNGQIERGCEGPST 806
Query: 263 -CITQPCGS-GSCVPLYDGYKCVCTQS 287
C C + G C+ +DG+ C C+ +
Sbjct: 807 TCQEDSCSNQGVCLQQWDGFSCDCSMT 833
Score = 148 (57.2 bits), Expect = 6.9e-13, Sum P(3) = 6.9e-13
Identities = 57/217 (26%), Positives = 94/217 (43%)
Query: 25 AWIQLNDGNKIKGRSKECLEDKCNKTPCEHGGKCITTPGSSYCLCP-LGFTGDLCQTRLD 83
A IQ G K S+E + C PC++ G C C C G+ G C+ +
Sbjct: 390 AEIQSTAGVK-PSCSRETAKP-CLSNPCKNNGMCRDGWNRYVCDCSGTGYLGRSCER--E 445
Query: 84 LQVPQFNGSSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLND 143
V ++GS +++ Q + D+++ F++ GIL+ R D D + L L+
Sbjct: 446 ATVLSYDGSMFMKIQLPVVMHTEAEDVSLRFRSQRAYGILMATTSR-DSA-DTLRLELDA 503
Query: 144 RYVDFTFDLGTGAATLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQX 203
V T +LG G TL + ++ EWH +R+ R G+ L VD + G T+
Sbjct: 504 GRVKLTVNLGKGPETLFAGYNLNDNEWHTVRVVRRGKSLKLTVDDQQAMTGQMAGDHTRL 563
Query: 204 XXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLIN 240
G + + +S + S+FIG +Q + N
Sbjct: 564 EFHNIET-GIITERRYLS---SVPSNFIGHLQSLTFN 596
Score = 138 (53.6 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 66/313 (21%), Positives = 125/313 (39%)
Query: 114 FKAIEPNGILLYN-G---HRADGVG------DFIALYLNDRYVDFTFDLGTGAATLRS-S 162
F+ EPNG++L++ G H+ D DF A+ + D ++ D+G+G +++
Sbjct: 238 FRTTEPNGLILFSHGKPRHQKDAKHPQMIKVDFFAIEMLDGHLYLLLDMGSGTIKIKALQ 297
Query: 163 NPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYN--IV 220
++ GEW+ + R GR + V+ + +PG GG+P+ +V
Sbjct: 298 KKVNDGEWYHVDFQRDGRSGTISVNTL-RTPYTAPGESEILDLDDELYLGGLPENKAGLV 356
Query: 221 SPK----VKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNCAHPCITQPCGSGSCVPL 276
P + ++GCI+ + I+ +I Q + + A + C + P
Sbjct: 357 FPTEVWTALLNYGYVGCIRDLFIDGQSKDIR----QMAEIQSTAG--VKPSCSRETAKPC 410
Query: 277 YDGYKCVCTQSCKESHLTEVM-CASFDH-GASFLHYLDPEIIHSSGLLHYKFQLHVDFRI 334
C C++ V C+ + G S + ++ G + K QL V
Sbjct: 411 LSN-PCKNNGMCRDGWNRYVCDCSGTGYLGRSCER--EATVLSYDGSMFMKIQLPVVMH- 466
Query: 335 TGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTK 394
T E ++ +R ++ + G+++ T S S D L L + G +
Sbjct: 467 TEAE-DVSLRFRSQRAYGILMATTSRDSADTLRLELDAGRVKLTVNLGKGPETLFAGYN- 524
Query: 395 INNGVWHRLTVHR 407
+N+ WH + V R
Sbjct: 525 LNDNEWHTVRVVR 537
Score = 121 (47.7 bits), Expect = 5.9e-10, Sum P(3) = 5.9e-10
Identities = 46/180 (25%), Positives = 83/180 (46%)
Query: 86 VPQFNGSSYLRYQGLGEQYLSLLD-LTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDR 144
+ F GS Y Y S D +T+ FK ++ NG++L+ G AD ++ L L +
Sbjct: 6 IATFKGSEYFCYDLSQNPIQSSSDEITLSFKTLQRNGLMLHTGKSAD----YVNLALKNG 61
Query: 145 YVDFTFDLGTGA--ATLRSSN-PISLGEWHKLRLTRTGR-HA---YLQVDRFPSSQ---- 193
V +LG+GA A + N + WH +++TR R H+ + V++ S
Sbjct: 62 AVSLVINLGSGAFEALVEPVNGKFNDNAWHDVKVTRNLRQHSGIGHAMVNKLHCSVTISV 121
Query: 194 --ILSPGPFTQXXXXXXXXX-----GGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNI 246
IL+ +TQ GG P + P + ++F+GC+++V+ N+++ +
Sbjct: 122 DGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADL-PGSPVSNNFMGCLKEVVYKNNDVRL 180
Score = 84 (34.6 bits), Expect = 6.9e-13, Sum P(3) = 6.9e-13
Identities = 18/66 (27%), Positives = 31/66 (46%)
Query: 344 RIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTK-INNGVWHR 402
+ KT+S GLIL+ S DF+ + + GY H ++ K +N+ WH
Sbjct: 653 QFKTTSLDGLILYN-SGDGNDFIVVELVKGYLHYVFDLGNGANLIKGSSNKPLNDNQWHN 711
Query: 403 LTVHRN 408
+ + R+
Sbjct: 712 VMISRD 717
Score = 65 (27.9 bits), Expect = 6.9e-13, Sum P(3) = 6.9e-13
Identities = 25/88 (28%), Positives = 38/88 (43%)
Query: 446 IRIDTDYSMQSISGGKFEQLNTDSGLYVGGVEDIEELTRSKYHHSFKGWISNLILSNDYQ 505
++IDT + Q +G + L+ S LY+GGV + K H+ +G+ + S D
Sbjct: 724 VKIDTKITTQITAGAR--NLDLKSDLYIGGVAKETYKSLPKLVHAKEGF-QGCLASVDLN 780
Query: 506 VKLPLSRSQGSSCQLTCETLNTG-QVTC 532
+LP S C E G TC
Sbjct: 781 GRLPDLISDALFCNGQIERGCEGPSTTC 808
Score = 58 (25.5 bits), Expect = 2.4e-07, Sum P(3) = 2.4e-07
Identities = 10/45 (22%), Positives = 22/45 (48%)
Query: 364 DFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGVWHRLTVHRN 408
DF A+ + +G+ +++ Q K+N+G W+ + R+
Sbjct: 269 DFFAIEMLDGHLYLLLDMGSGTIKIKALQKKVNDGEWYHVDFQRD 313
Score = 47 (21.6 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 15/51 (29%), Positives = 27/51 (52%)
Query: 428 EFKCLSIQRLHRTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVED 478
E+ + QR R+G + + T Y+ + G+ E L+ D LY+GG+ +
Sbjct: 304 EWYHVDFQRDGRSGTISVNTLRTPYT----APGESEILDLDDELYLGGLPE 350
Score = 41 (19.5 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 8/28 (28%), Positives = 16/28 (57%)
Query: 11 DDWNTVRVFRHRWDAWIQLNDGNKIKGR 38
++W+TVRV R + ++D + G+
Sbjct: 528 NEWHTVRVVRRGKSLKLTVDDQQAMTGQ 555
>UNIPROTKB|Q9Y4C0 [details] [associations]
symbol:NRXN3 "Neurexin-3" species:9606 "Homo sapiens"
[GO:0004872 "receptor activity" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005246 "calcium channel regulator activity"
evidence=IEA] [GO:0007269 "neurotransmitter secretion"
evidence=IEA] [GO:0007416 "synapse assembly" evidence=IEA]
[GO:0005887 "integral to plasma membrane" evidence=TAS] [GO:0007411
"axon guidance" evidence=TAS] InterPro:IPR000742 InterPro:IPR027149
PROSITE:PS50026 SMART:SM00181 InterPro:IPR000152 GO:GO:0007411
GO:GO:0005887 EMBL:CH471061 GO:GO:0046872 GO:GO:0007155
GO:GO:0004872 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0007416
PROSITE:PS01186 InterPro:IPR001791 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 GO:GO:0007269 GO:GO:0005246 Pfam:PF02210
InterPro:IPR003585 SMART:SM00294 eggNOG:NOG302266
HOVERGEN:HBG052670 KO:K07377 CTD:9369 PANTHER:PTHR10127:SF405
EMBL:AJ316284 EMBL:AF099810 EMBL:AF123462 EMBL:AB018286
EMBL:AC008056 EMBL:AC012099 EMBL:AC009396 EMBL:AC008045
EMBL:AC011440 EMBL:AC026888 EMBL:BC152457 IPI:IPI00414249
IPI:IPI00854729 IPI:IPI01025492 RefSeq:NP_004787.2
UniGene:Hs.368307 HSSP:Q63373 ProteinModelPortal:Q9Y4C0 SMR:Q9Y4C0
IntAct:Q9Y4C0 STRING:Q9Y4C0 PhosphoSite:Q9Y4C0 DMDM:224471902
PaxDb:Q9Y4C0 PRIDE:Q9Y4C0 Ensembl:ENST00000335750
Ensembl:ENST00000554719 Ensembl:ENST00000554738 GeneID:9369
KEGG:hsa:9369 UCSC:uc001xun.3 GeneCards:GC14P078710 HGNC:HGNC:8010
HPA:HPA002727 MIM:600567 neXtProt:NX_Q9Y4C0 PharmGKB:PA31788
ChiTaRS:NRXN3 GenomeRNAi:9369 NextBio:35088 ArrayExpress:Q9Y4C0
Bgee:Q9Y4C0 CleanEx:HS_NRXN3 Genevestigator:Q9Y4C0
GermOnline:ENSG00000021645 Uniprot:Q9Y4C0
Length = 1643
Score = 220 (82.5 bits), Expect = 7.2e-13, Sum P(2) = 7.2e-13
Identities = 80/327 (24%), Positives = 142/327 (43%)
Query: 92 SSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFD 151
SSYL L + Y S+ L FK P+G +L+N DG DFIA+ L Y+ + FD
Sbjct: 879 SSYLSLATL-QAYTSM-HLFFQFKTTSPDGFILFNS--GDG-NDFIAVELVKGYIHYVFD 933
Query: 152 LGTGAATLR--SSNPISLGEWHKLRLTRTGRHAY-LQVDRFPSSQILSPGPFTQXXXXXX 208
LG G ++ S P++ +WH + +TR + + L+VD +Q+++
Sbjct: 934 LGNGPNVIKGNSDRPLNDNQWHNVVITRDNSNTHSLKVDTKVVTQVINGAKNLDLKGDLY 993
Query: 209 XXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVN--CAHP---C 263
Y+ + V + F GC+ V +N +++ +A+ + C P C
Sbjct: 994 MAGLAQGMYSNLPKLVASRDGFQGCLASVDLNGRLPDLINDALHRSGQIERGCEGPSTTC 1053
Query: 264 ITQPCGS-GSCVPLYDGYKCVCTQSCKESHLTEVMCASFDHGASFLHYLDPEIIHSSGLL 322
C + G C+ ++G+ C C+ + + C D GA+++ S GL+
Sbjct: 1054 QEDSCANQGVCMQQWEGFTCDCSMTSYSGN----QCN--DPGATYIFG------KSGGLI 1101
Query: 323 HYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSK-DFLALGIHNGYAHVMYXX 381
Y + + D T + + + T+ G+++ S+ DFL L I G V++
Sbjct: 1102 LYTWPAN-DRPSTRSD-RLAVGFSTTVKDGILVRIDSAPGLGDFLQLHIEQGKIGVVFNI 1159
Query: 382 XXXXXXXXXXQTKINNGVWHRLTVHRN 408
+T +N+G +H + RN
Sbjct: 1160 GTVDISIKEERTPVNDGKYHVVRFTRN 1186
Score = 183 (69.5 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 81/319 (25%), Positives = 126/319 (39%)
Query: 109 DLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSNPISLG 168
DL+ FK G+LLY GV DF+ L L D V F + + S+ ++
Sbjct: 50 DLSFQFKTNVSTGLLLYLDD--GGVCDFLCLSLVDGRVQLRFSMDCAETAVLSNKQVNDS 107
Query: 169 EWHKLRLTRTGRHAYLQVDRFPSSQILSPG-PFTQXXXXXXXXXGGVP-DYN---IVSPK 223
WH L ++R L +D S L P P+ GGVP D +
Sbjct: 108 SWHFLMVSRDRLRTVLMLDGEGQSGELQPQRPYMDVVSDLFL--GGVPTDIRPSALTLDG 165
Query: 224 VKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNCAHPCITQPCGSGSCVPLYDGYKCV 283
V+ F G I + N E +LG +GV + + PC +PC +G L DG+
Sbjct: 166 VQAMPGFKGLILDLKYGNSEPRLLGS--RGVQM-DAEGPCGERPCENGGICFLLDGHP-T 221
Query: 284 CTQSCKESHLTEVMCA---SFDHGASFLHYLDPEIIHSSGLLHYKFQLHVDFRITGYEFN 340
C C + +C+ S D G S H + E + ++ ++ + ++
Sbjct: 222 C--DCSTTGYGGKLCSEDVSQDPGLS--HLMMSEQAREENVATFRGSEYLCYDLSQNPIQ 277
Query: 341 -----IDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQT-- 393
I + KT +GLIL TG +S D++ L + +G ++
Sbjct: 278 SSSDEITLSFKTWQRNGLILHTG--KSADYVNLALKDGAVSLVINLGSGAFEAIVEPVNG 335
Query: 394 KINNGVWHRLTVHRNFMVV 412
K N+ WH + V RN V
Sbjct: 336 KFNDNAWHDVKVTRNLRQV 354
Score = 139 (54.0 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 38/150 (25%), Positives = 72/150 (48%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCPL-GFTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQYL 105
C + C + G C+ C C + ++G+ C + +G L ++
Sbjct: 1053 CQEDSCANQGVCMQQWEGFTCDCSMTSYSGNQCNDPGATYIFGKSGGLILYTWPANDRPS 1112
Query: 106 SLLD-LTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSN- 163
+ D L + F +GIL+ A G+GDF+ L++ + F++GT +++
Sbjct: 1113 TRSDRLAVGFSTTVKDGILV-RIDSAPGLGDFLQLHIEQGKIGVVFNIGTVDISIKEERT 1171
Query: 164 PISLGEWHKLRLTRTGRHAYLQVDRFPSSQ 193
P++ G++H +R TR G +A LQVD +P ++
Sbjct: 1172 PVNDGKYHVVRFTRNGGNATLQVDNWPVNE 1201
Score = 129 (50.5 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 71/329 (21%), Positives = 130/329 (39%)
Query: 114 FKAIEPNGILLY-NG---HRADGVG------DFIALYLNDRYVDFTFDLGTGAATLRSSN 163
F+ EPNG++L+ +G R D DF A+ L D + D+G+G ++++
Sbjct: 475 FRTTEPNGLILFTHGKPQERKDARSQKNTKVDFFAVELLDGNLYLLLDMGSGTIKVKATQ 534
Query: 164 P-ISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYN--IV 220
+ GEW+ + + R GR + V+ + + G GG+P+ ++
Sbjct: 535 KKANDGEWYHVDIQRDGRSGTISVNS-RRTPFTASGESEILDLEGDMYLGGLPENRAGLI 593
Query: 221 SPK----VKIKSSFIGCIQKVLINNHELNI--LGEAIQGVNVVN-C----AHPCITQPCG 269
P + ++GCI+ + I+ NI L E V + C A C + PC
Sbjct: 594 LPTELWTAMLNYGYVGCIRDLFIDGRSKNIRQLAEMQNAAGVKSSCSRMSAKQCDSYPCK 653
Query: 270 SGS-CVPLYDGYKCVCTQSCKESHLTE--VMCASFDHGASFLHYLDPEIIHSSGLLHYKF 326
+ + C ++ + C CT + E S+D G+ ++ + P ++H+
Sbjct: 654 NNAVCKDGWNRFICDCTGTGYWGRTCEREASILSYD-GSMYMKIIMPMVMHTEA------ 706
Query: 327 QLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXX 386
E ++ R + + GL++ T S S D L L + G +M
Sbjct: 707 -----------E-DVSFRFMSQRAYGLLVATTSRDSADTLRLELDGGRVKLMVNLDCIRI 754
Query: 387 XXXXXQ--------TKINNGVWHRLTVHR 407
+ K+N+ WH + V R
Sbjct: 755 NCNSSKGPETLYAGQKLNDNEWHTVRVVR 783
Score = 74 (31.1 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 19/77 (24%), Positives = 36/77 (46%)
Query: 436 RLHRTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVEDIEELTRSKYHHSFKGWI 495
++ R +Q I +D + + + L +D YVGG +L S ++F G +
Sbjct: 346 KVTRNLRQVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGCL 405
Query: 496 SNLILSNDYQVKLPLSR 512
++ N+ ++L LSR
Sbjct: 406 KEVVYKNN-DIRLELSR 421
Score = 48 (22.0 bits), Expect = 5.7e-10, Sum P(2) = 5.7e-10
Identities = 16/59 (27%), Positives = 31/59 (52%)
Query: 446 IRIDTDYSMQSISGGKFEQLNTD---SGLYVGGVEDIEELTRSKYHHSFKGWISNLILS 501
+++DT Q I+G K L D +GL G ++ +L S+ F+G ++++ L+
Sbjct: 969 LKVDTKVVTQVINGAKNLDLKGDLYMAGLAQGMYSNLPKLVASR--DGFQGCLASVDLN 1025
Score = 43 (20.2 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 19/101 (18%), Positives = 47/101 (46%)
Query: 437 LHRTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVEDIE-------ELTRSKYHH 489
+ R G+ I +++ + + SG + E L+ + +Y+GG+ + EL + ++
Sbjct: 547 IQRDGRSGTISVNSRRTPFTASG-ESEILDLEGDMYLGGLPENRAGLILPTELWTAMLNY 605
Query: 490 SFKGWISNLILSNDYQVKLPLSRSQGSS-CQLTCETLNTGQ 529
+ G I +L + + L+ Q ++ + +C ++ Q
Sbjct: 606 GYVGCIRDLFIDGRSKNIRQLAEMQNAAGVKSSCSRMSAKQ 646
Score = 37 (18.1 bits), Expect = 7.2e-13, Sum P(2) = 7.2e-13
Identities = 6/10 (60%), Positives = 9/10 (90%)
Query: 11 DDWNTVRVFR 20
++W+TVRV R
Sbjct: 774 NEWHTVRVVR 783
>UNIPROTKB|F1N119 [details] [associations]
symbol:NRXN1 "Neurexin-1-beta" species:9913 "Bos taurus"
[GO:0090129 "positive regulation of synapse maturation"
evidence=IEA] [GO:0051965 "positive regulation of synapse assembly"
evidence=IEA] [GO:0007416 "synapse assembly" evidence=IEA]
[GO:0007269 "neurotransmitter secretion" evidence=IEA]
InterPro:IPR000742 InterPro:IPR027158 PROSITE:PS50026 SMART:SM00181
InterPro:IPR000152 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 Pfam:PF02210
GeneTree:ENSGT00560000076996 PANTHER:PTHR10127:SF309
IPI:IPI00708029 EMBL:DAAA02030804 EMBL:DAAA02030805
EMBL:DAAA02030806 EMBL:DAAA02030807 Ensembl:ENSBTAT00000026956
Uniprot:F1N119
Length = 842
Score = 188 (71.2 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 61/207 (29%), Positives = 99/207 (47%)
Query: 92 SSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFD 151
SSY+ L + Y S+ L FK +G++LYN DG DFI + L Y+ + FD
Sbjct: 634 SSYVALATL-QAYTSM-HLFFQFKTTSLDGLILYNS--GDG-NDFIVVELVKGYLHYVFD 688
Query: 152 LGTGAATLR-SSN-PISLGEWHKLRLTRTGRHAY-LQVDRFPSSQILSPGPFTQXXXXXX 208
LG GA ++ SSN P++ +WH + ++R + + +++D ++QI +
Sbjct: 689 LGNGANLIKGSSNKPLNDNQWHNVMISRDTSNLHTVKIDTKITTQITAGA--RNLDLKSD 746
Query: 209 XXXGGVPDYNIVS-PK-VKIKSSFIGCIQKVLINNHELNILGEAI--QGVNVVNCAHP-- 262
GGV S PK V K F GC+ V +N +++ +A+ G C P
Sbjct: 747 LYIGGVAKETYKSLPKLVHAKEGFQGCLASVDLNGRLPDLISDALFCNGQIERGCEGPST 806
Query: 263 -CITQPCGS-GSCVPLYDGYKCVCTQS 287
C C + G C+ +DG+ C C+ +
Sbjct: 807 TCQEDSCSNQGVCLQQWDGFSCDCSMT 833
Score = 147 (56.8 bits), Expect = 8.8e-13, Sum P(3) = 8.8e-13
Identities = 50/195 (25%), Positives = 85/195 (43%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCP-LGFTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQYL 105
C PC++ G C C C G+ G C+ + V ++GS +++ Q +
Sbjct: 410 CLSNPCKNNGMCRDGWNRYVCDCSGTGYLGRSCER--EATVLSYDGSMFMKIQLPVVMHT 467
Query: 106 SLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSNPI 165
D+++ F++ GIL+ R D D + L L+ V T +LG G TL + +
Sbjct: 468 EAEDVSLRFRSQRAYGILMATTSR-DSA-DTLRLELDAGRVKLTVNLGKGPETLFAGYNL 525
Query: 166 SLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSPKVK 225
+ EWH +R+ R G+ L VD + G T+ G + + +S
Sbjct: 526 NDNEWHTVRVVRRGKSLKLTVDDQQAMTGQMAGDHTRLEFHNIET-GIITERRYLS---S 581
Query: 226 IKSSFIGCIQKVLIN 240
+ S+FIG +Q + N
Sbjct: 582 VPSNFIGHLQSLTFN 596
Score = 139 (54.0 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 67/313 (21%), Positives = 125/313 (39%)
Query: 114 FKAIEPNGILLYN-G---HRADGVG------DFIALYLNDRYVDFTFDLGTGAATLRS-S 162
F+ EPNG++L++ G H+ D DF A+ + D ++ D+G+G +++
Sbjct: 238 FRTTEPNGLILFSHGKPRHQKDAKHPQMIKVDFFAIEMLDGHLYLLLDMGSGTIKIKALQ 297
Query: 163 NPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYN--IV 220
++ GEW+ + R GR + V+ + +PG GG+P+ +V
Sbjct: 298 KKVNDGEWYHVDFQRDGRSGTISVNTL-RTPYTAPGESEILDLDDELYLGGLPENKAGLV 356
Query: 221 SPK----VKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNCAHPCITQPCGSGSCVPL 276
P + ++GCI+ + I+ +I Q V + A + C + P
Sbjct: 357 FPTEVWTALLNYGYVGCIRDLFIDGQSKDIR----QMAEVQSTAG--VKPSCSRETAKPC 410
Query: 277 YDGYKCVCTQSCKESHLTEVM-CASFDH-GASFLHYLDPEIIHSSGLLHYKFQLHVDFRI 334
C C++ V C+ + G S + ++ G + K QL V
Sbjct: 411 LSN-PCKNNGMCRDGWNRYVCDCSGTGYLGRSCER--EATVLSYDGSMFMKIQLPVVMH- 466
Query: 335 TGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTK 394
T E ++ +R ++ + G+++ T S S D L L + G +
Sbjct: 467 TEAE-DVSLRFRSQRAYGILMATTSRDSADTLRLELDAGRVKLTVNLGKGPETLFAGYN- 524
Query: 395 INNGVWHRLTVHR 407
+N+ WH + V R
Sbjct: 525 LNDNEWHTVRVVR 537
Score = 121 (47.7 bits), Expect = 5.9e-10, Sum P(3) = 5.9e-10
Identities = 46/180 (25%), Positives = 83/180 (46%)
Query: 86 VPQFNGSSYLRYQGLGEQYLSLLD-LTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDR 144
+ F GS Y Y S D +T+ FK ++ NG++L+ G AD ++ L L +
Sbjct: 6 IATFKGSEYFCYDLSQNPIQSSSDEITLSFKTLQRNGLMLHTGKSAD----YVNLALKNG 61
Query: 145 YVDFTFDLGTGA--ATLRSSN-PISLGEWHKLRLTRTGR-HA---YLQVDRFPSSQ---- 193
V +LG+GA A + N + WH +++TR R H+ + V++ S
Sbjct: 62 AVSLVINLGSGAFEALVEPVNGKFNDNAWHDVKVTRNLRQHSGIGHAMVNKLHCSVTISV 121
Query: 194 --ILSPGPFTQXXXXXXXXX-----GGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNI 246
IL+ +TQ GG P + P + ++F+GC+++V+ N+++ +
Sbjct: 122 DGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADL-PGSPVSNNFMGCLKEVVYKNNDVRL 180
Score = 84 (34.6 bits), Expect = 8.8e-13, Sum P(3) = 8.8e-13
Identities = 18/66 (27%), Positives = 31/66 (46%)
Query: 344 RIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTK-INNGVWHR 402
+ KT+S GLIL+ S DF+ + + GY H ++ K +N+ WH
Sbjct: 653 QFKTTSLDGLILYN-SGDGNDFIVVELVKGYLHYVFDLGNGANLIKGSSNKPLNDNQWHN 711
Query: 403 LTVHRN 408
+ + R+
Sbjct: 712 VMISRD 717
Score = 65 (27.9 bits), Expect = 8.8e-13, Sum P(3) = 8.8e-13
Identities = 25/88 (28%), Positives = 38/88 (43%)
Query: 446 IRIDTDYSMQSISGGKFEQLNTDSGLYVGGVEDIEELTRSKYHHSFKGWISNLILSNDYQ 505
++IDT + Q +G + L+ S LY+GGV + K H+ +G+ + S D
Sbjct: 724 VKIDTKITTQITAGAR--NLDLKSDLYIGGVAKETYKSLPKLVHAKEGF-QGCLASVDLN 780
Query: 506 VKLPLSRSQGSSCQLTCETLNTG-QVTC 532
+LP S C E G TC
Sbjct: 781 GRLPDLISDALFCNGQIERGCEGPSTTC 808
Score = 58 (25.5 bits), Expect = 2.4e-07, Sum P(3) = 2.4e-07
Identities = 10/45 (22%), Positives = 22/45 (48%)
Query: 364 DFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGVWHRLTVHRN 408
DF A+ + +G+ +++ Q K+N+G W+ + R+
Sbjct: 269 DFFAIEMLDGHLYLLLDMGSGTIKIKALQKKVNDGEWYHVDFQRD 313
Score = 47 (21.6 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 15/51 (29%), Positives = 27/51 (52%)
Query: 428 EFKCLSIQRLHRTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVED 478
E+ + QR R+G + + T Y+ + G+ E L+ D LY+GG+ +
Sbjct: 304 EWYHVDFQRDGRSGTISVNTLRTPYT----APGESEILDLDDELYLGGLPE 350
Score = 41 (19.5 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 8/28 (28%), Positives = 16/28 (57%)
Query: 11 DDWNTVRVFRHRWDAWIQLNDGNKIKGR 38
++W+TVRV R + ++D + G+
Sbjct: 528 NEWHTVRVVRRGKSLKLTVDDQQAMTGQ 555
>ZFIN|ZDB-GENE-060118-1 [details] [associations]
symbol:lama1 "laminin, alpha 1" species:7955 "Danio
rerio" [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0005606 "laminin-1 complex" evidence=IEA]
[GO:0030155 "regulation of cell adhesion" evidence=IEA] [GO:0005102
"receptor binding" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0005604 "basement membrane" evidence=IEA]
[GO:0043010 "camera-type eye development" evidence=IMP] [GO:0007409
"axonogenesis" evidence=IMP] [GO:0030903 "notochord development"
evidence=IMP] [GO:0048514 "blood vessel morphogenesis"
evidence=IGI] [GO:0001568 "blood vessel development" evidence=IGI]
[GO:0007634 "optokinetic behavior" evidence=IMP] [GO:0007411 "axon
guidance" evidence=IMP] [GO:0008045 "motor neuron axon guidance"
evidence=IMP] [GO:0001764 "neuron migration" evidence=IGI;IMP]
[GO:0031290 "retinal ganglion cell axon guidance" evidence=IMP]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
ZFIN:ZDB-GENE-060118-1 GO:GO:0001764 GO:GO:0030155 GO:GO:0048514
GO:GO:0007155 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0043010 GO:GO:0030334
GO:GO:0008045 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
Pfam:PF00054 SMART:SM00180 SMART:SM00282 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 GO:GO:0031290 Pfam:PF02210
GO:GO:0045995 GO:GO:0030903 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 GO:GO:0007634
CTD:284217 HOVERGEN:HBG052298 KO:K05637 OrthoDB:EOG4K3KVB
GO:GO:0005606 EMBL:DQ131910 IPI:IPI00492896 RefSeq:NP_001030158.1
UniGene:Dr.94156 ProteinModelPortal:Q45H72 SMR:Q45H72 STRING:Q45H72
GeneID:569971 KEGG:dre:569971 NextBio:20889926 Uniprot:Q45H72
Length = 3075
Score = 183 (69.5 bits), Expect = 3.1e-10, Sum P(3) = 3.1e-10
Identities = 65/219 (29%), Positives = 106/219 (48%)
Query: 89 FNGSSYLRYQGLGEQYLSLLDLTIV--FKAIEPNGILLYNGHRADGVGDFIALYLNDRYV 146
F+GS + + E+ L + ++V FK + PNG+LLY ++G DF+++ L + V
Sbjct: 2313 FDGSGF----SVVEKSLRSMSTSVVMFFKTLSPNGLLLYLA--SNGTRDFLSIELVEGKV 2366
Query: 147 DFTFDLGTGAATLRSSNPISLGEWHKLRLTRTGRHAYLQVDRF--PSS-QIL---SPGPF 200
TF+LG+GA T+ SS + G W+++ L R R +L V PS ++L +PG
Sbjct: 2367 HLTFELGSGALTMTSSRTYNTGSWYRIALQRNKRKGHLSVMAASNPSEREVLEAEAPGQA 2426
Query: 201 TQXXXXXXX--XXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVN 258
+ GG+P + +V + SF+GC++ V I ++L EA GV
Sbjct: 2427 SDLNRSDLDPIYIGGLPASRPIRRQV-VARSFVGCMKNVEIARTNFDLLREAY-GVK--- 2481
Query: 259 CAHPCITQPCGSGSCVPLYDGYKCVCTQSCKESHLTEVM 297
C+ +P S V ++ G SH TE+M
Sbjct: 2482 --KGCVLKPIRS---VSVFGGGFLEMPAVLLSSH-TEIM 2514
Score = 154 (59.3 bits), Expect = 9.0e-13, Sum P(4) = 9.0e-13
Identities = 45/145 (31%), Positives = 71/145 (48%)
Query: 110 LTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSN-PISLG 168
LT+ K EP+ +L Y G + DF+AL ++D V F +D G+G L + I+
Sbjct: 2146 LTLTMKTSEPDNLLFYMGSSSSE--DFMALEMHDGKVSFLWDAGSGHNRLEYPDVQINND 2203
Query: 169 EWHKLRLTRTGRHAYLQVDR-----FPSSQILSPGPFT--QXXXXXXXXXGGVPDYNIVS 221
+WH++ TR GRHA L V + P+ + + G T GG+ S
Sbjct: 2204 KWHRINATRFGRHATLTVQQTDSEPLPAVKSSAAGSATVMDVNKHTWVYVGGLGGQVKKS 2263
Query: 222 PKVKIKSSFIGCIQKVLINNHELNI 246
P VKI + F GC+ + L+N + + +
Sbjct: 2264 PAVKI-THFRGCMGEALLNENNIGL 2287
Score = 101 (40.6 bits), Expect = 9.0e-13, Sum P(4) = 9.0e-13
Identities = 20/69 (28%), Positives = 37/69 (53%)
Query: 340 NIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGV 399
++ M KT S +GL+L+ S+ ++DFL++ + G H+ + +T N G
Sbjct: 2331 SVVMFFKTLSPNGLLLYLASNGTRDFLSIELVEGKVHLTFELGSGALTMTSSRT-YNTGS 2389
Query: 400 WHRLTVHRN 408
W+R+ + RN
Sbjct: 2390 WYRIALQRN 2398
Score = 62 (26.9 bits), Expect = 9.0e-13, Sum P(4) = 9.0e-13
Identities = 17/56 (30%), Positives = 23/56 (41%)
Query: 32 GNKIKGRSKECLEDKCNKTPCEHGGK--C-ITTPGSSYC-LCPLGFTGDLCQTRLD 83
G+ +G +C C T + C + PG C C G+TGD CQ D
Sbjct: 781 GDASEGTPDDCQRCSCPLTLASNNFSPTCQLQAPGEFICDQCQSGYTGDKCQRCAD 836
Score = 47 (21.6 bits), Expect = 2.8e-11, Sum P(4) = 2.8e-11
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 39 SKECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLC 78
S C+ D + P + G +PG C+C GF G+ C
Sbjct: 413 SPVCIRDDNHANP-DAG----LSPGQ--CVCKEGFAGEKC 445
Score = 47 (21.6 bits), Expect = 1.2e-07, Sum P(3) = 1.2e-07
Identities = 21/99 (21%), Positives = 40/99 (40%)
Query: 405 VHRNFMVVMHGSSHTRSNKSSKIEFKCLSIQRLHRTGKQCLIRIDTDYSMQSISG---GK 461
VH F + + T S + + +++QR R G ++ + + G+
Sbjct: 2366 VHLTFELGSGALTMTSSRTYNTGSWYRIALQRNKRKGHLSVMAASNPSEREVLEAEAPGQ 2425
Query: 462 FEQLN-TD-SGLYVGGVEDIEELTRSKYHHSFKGWISNL 498
LN +D +Y+GG+ + R SF G + N+
Sbjct: 2426 ASDLNRSDLDPIYIGGLPASRPIRRQVVARSFVGCMKNV 2464
Score = 46 (21.3 bits), Expect = 3.5e-11, Sum P(4) = 3.5e-11
Identities = 6/14 (42%), Positives = 10/14 (71%)
Query: 66 YCLCPLGFTGDLCQ 79
+C CP G++G C+
Sbjct: 711 HCECPWGYSGTSCE 724
Score = 45 (20.9 bits), Expect = 4.4e-11, Sum P(4) = 4.4e-11
Identities = 11/31 (35%), Positives = 12/31 (38%)
Query: 51 PCE---HGGKCITTPGSSYCLCPLGFTGDLC 78
PCE G + C C G TGD C
Sbjct: 953 PCECNQSGALSASCDEEGRCQCITGVTGDKC 983
Score = 42 (19.8 bits), Expect = 9.0e-13, Sum P(4) = 9.0e-13
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 467 TDSGLYVGG-VEDIEELTRSKYHHSFKGWISNL 498
T + +YVGG D+++ S SF+G + NL
Sbjct: 3015 TKNPIYVGGHPADVKQNCLS-VRQSFRGCMRNL 3046
Score = 42 (19.8 bits), Expect = 8.7e-11, Sum P(4) = 8.7e-11
Identities = 7/13 (53%), Positives = 8/13 (61%)
Query: 67 CLCPLGFTGDLCQ 79
C CP G+ G CQ
Sbjct: 1365 CECPPGYAGLSCQ 1377
Score = 41 (19.5 bits), Expect = 1.1e-10, Sum P(4) = 1.1e-10
Identities = 10/29 (34%), Positives = 13/29 (44%)
Query: 42 CLEDKCNKTPCE-HGGKCITTPGSSYCLC 69
C E + C+ H G+C PG LC
Sbjct: 1514 CSESGSVHSVCDAHTGRCECKPGVRGHLC 1542
Score = 40 (19.1 bits), Expect = 1.4e-10, Sum P(4) = 1.4e-10
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 64 SSYCLCPLGFTGDLC 78
S C+C L F+G C
Sbjct: 1063 SGQCVCALQFSGLTC 1077
Score = 39 (18.8 bits), Expect = 1.8e-12, Sum P(4) = 1.8e-12
Identities = 15/60 (25%), Positives = 22/60 (36%)
Query: 461 KFEQLNTDSGLYVGGVEDIEELTR-SKYHHSFKGWISNLILSN-DYQVKLPLSRSQGSSC 518
K L+ + LYVGG+ R HS + +L + + PLS C
Sbjct: 2831 KGHTLDVEGKLYVGGLPPTYTAKRIGNVTHSVAACVQDLTFNGVPMNLNNPLSSHATGFC 2890
Score = 39 (18.8 bits), Expect = 1.7e-10, Sum P(4) = 1.7e-10
Identities = 13/44 (29%), Positives = 16/44 (36%)
Query: 45 DKCNKTPCEHGGKCITTPGSSY-CLCPLGFTGDLCQTRLDLQVP 87
D+C P +G TP C CPL + LQ P
Sbjct: 773 DQC--LPGFYGDASEGTPDDCQRCSCPLTLASNNFSPTCQLQAP 814
>ZFIN|ZDB-GENE-030722-3 [details] [associations]
symbol:slit1a "slit homolog 1a (Drosophila)"
species:7955 "Danio rerio" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0007411 "axon guidance" evidence=NAS] [GO:0005576
"extracellular region" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IMP] InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152
ZFIN:ZDB-GENE-030722-3 GO:GO:0007411 GO:GO:0005576
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 GO:GO:0045773 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 Pfam:PF12661
GO:GO:0051964 Pfam:PF01463 HOVERGEN:HBG057959 KO:K06838
EMBL:DQ177286 IPI:IPI00506990 RefSeq:NP_001030140.1
UniGene:Dr.88478 ProteinModelPortal:Q3S2J2 SMR:Q3S2J2 STRING:Q3S2J2
GeneID:556123 KEGG:dre:556123 CTD:556123 NextBio:20881326
Uniprot:Q3S2J2
Length = 1524
Score = 206 (77.6 bits), Expect = 9.5e-13, P = 9.5e-13
Identities = 73/269 (27%), Positives = 118/269 (43%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQYLS 106
C + C++ C+ G C C GF G C+ +L + V + SYL L +
Sbjct: 1121 CERADCQNNAPCVERAGHPLCQCLEGFGGPRCE-KL-VSVNFVDRDSYLLLSDL--KNWP 1176
Query: 107 LLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAA-TLRSSNPI 165
++T+ E NGILLYNG D IA+ +++ +V ++D G+ + + S+ +
Sbjct: 1177 QANITLQVSTAEDNGILLYNGDN-----DHIAVEIHEGHVKVSYDPGSQQSHAIYSTETV 1231
Query: 166 SLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVP-DYNIVSPKV 224
+ G++H + L + L +D + + S G GG+P + +P+V
Sbjct: 1232 NDGQFHTVELVTFDQMVNLSIDGGSPTTMDSFGKVQPLRGEAPLYVGGMPVSVHPTAPRV 1291
Query: 225 -KIK--SSFIGCIQKVLINNHELNILGEAIQGVNVVNCAHPCITQPCGSGSCVP-LYDGY 280
+I+ SSF GCIQ + INN EL + VV PC C G C P G
Sbjct: 1292 WQIQNSSSFHGCIQNLYINN-ELQDFTKTQMKPGVVPGCEPCRKIYCLHGICQPNTATGP 1350
Query: 281 KCVCTQSCKESHLTEVMCASFDHGASFLH 309
C C H + + A+ G+ +H
Sbjct: 1351 VCHCQPGWSGQHCDQPL-ANPCMGSKCVH 1378
Score = 87 (35.7 bits), Expect = 1.6e-06, Sum P(4) = 1.6e-06
Identities = 20/56 (35%), Positives = 29/56 (51%)
Query: 31 DGNKIKGRSKECLEDKCNKTPCEHGGKC-ITTP-GSSY-CLCPLGFTGDLCQTRLD 83
DG KG++ E + + C PC++GG C ++T Y C C GF G C+ D
Sbjct: 947 DG--FKGKNCETVVNACVSEPCKNGGTCHVSTDEDEGYSCSCAAGFEGPSCEVDTD 1000
Score = 87 (35.7 bits), Expect = 1.6e-06, Sum P(4) = 1.6e-06
Identities = 21/92 (22%), Positives = 43/92 (46%)
Query: 340 NIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGV 399
NI +++ T+ +G++L+ G + D +A+ IH G+ V Y +N+G
Sbjct: 1179 NITLQVSTAEDNGILLYNGDN---DHIAVEIHEGHVKVSYDPGSQQSHAIYSTETVNDGQ 1235
Query: 400 WHRL---TVHRNFMVVMHGSSHTRSNKSSKIE 428
+H + T + + + G S T + K++
Sbjct: 1236 FHTVELVTFDQMVNLSIDGGSPTTMDSFGKVQ 1267
Score = 86 (35.3 bits), Expect = 2.0e-06, Sum P(4) = 2.0e-06
Identities = 16/49 (32%), Positives = 26/49 (53%)
Query: 36 KGRSKECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDL 84
+G S E D+C C++G CI + CLC +TG++C+ D+
Sbjct: 991 EGPSCEVDTDECRDNDCQNGATCIDGINNYTCLCAPFYTGEMCEDLEDM 1039
Score = 85 (35.0 bits), Expect = 2.5e-06, Sum P(4) = 2.5e-06
Identities = 16/49 (32%), Positives = 23/49 (46%)
Query: 37 GRSKECLEDKCN--KTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLD 83
G E LED C+ ++PC+ C T C+C G+ G+ C D
Sbjct: 1030 GEMCEDLEDMCSSARSPCKQQSTCFITVTGPKCICAAGYVGEDCSVNYD 1078
Score = 78 (32.5 bits), Expect = 0.00032, Sum P(3) = 0.00032
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 45 DKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQ 79
D C C++G +C+ C+C G++G LC+
Sbjct: 1078 DDCKDHRCQNGAQCVDELNGYSCVCQKGYSGQLCE 1112
Score = 75 (31.5 bits), Expect = 2.3e-05, Sum P(4) = 2.3e-05
Identities = 22/64 (34%), Positives = 28/64 (43%)
Query: 36 KGRSKECLEDKCNKT---PCEHGGKCITTPGSSY-CLCPLGFTGDLCQTRLDLQV--PQF 89
+G + KCN PC H G C SY C C GF G C+T ++ V P
Sbjct: 908 QGEVDSAILAKCNPCASGPCLHQGVCEADQTDSYRCRCADGFKGKNCETVVNACVSEPCK 967
Query: 90 NGSS 93
NG +
Sbjct: 968 NGGT 971
Score = 58 (25.5 bits), Expect = 1.6e-06, Sum P(4) = 1.6e-06
Identities = 18/53 (33%), Positives = 26/53 (49%)
Query: 458 SGGKFEQLNTDSGLYVGGVEDIEELTRSKYHH-----SFKGWISNLILSNDYQ 505
S GK + L ++ LYVGG+ T + SF G I NL ++N+ Q
Sbjct: 1262 SFGKVQPLRGEAPLYVGGMPVSVHPTAPRVWQIQNSSSFHGCIQNLYINNELQ 1314
Score = 56 (24.8 bits), Expect = 1.6e-06, Sum P(4) = 1.6e-06
Identities = 14/35 (40%), Positives = 17/35 (48%)
Query: 263 CITQPCGSGS-CVPLYDGYKCVCTQSCKESHLTEV 296
C C +G+ CV +GY CVC Q L EV
Sbjct: 1080 CKDHRCQNGAQCVDELNGYSCVC-QKGYSGQLCEV 1113
>RGD|1306459 [details] [associations]
symbol:Cntnap4 "contactin associated protein-like 4"
species:10116 "Rattus norvegicus" [GO:0030425 "dendrite"
evidence=ISO] REFSEQ:NM_001107432 Ncbi:NP_001100902
Length = 1310
Score = 178 (67.7 bits), Expect = 9.8e-13, Sum P(3) = 9.8e-13
Identities = 98/385 (25%), Positives = 153/385 (39%)
Query: 64 SSYCLCPLGFTGDLCQTRLDLQVPQFNG-SSYLRYQGL-GEQYLSLLDLTIVFKAIEPNG 121
++Y L PL GD R FN +SYL + GE LS D++ FK +G
Sbjct: 778 AAYKLGPLLCRGD----RPFWNAASFNTEASYLHFPTFHGE--LSA-DVSFYFKTTALSG 830
Query: 122 ILLYNGHRADGVGDFIALYLND-RYVDFTFDLGTGAATLRSSNPISLGE--WHKLRLTRT 178
+ L N G+ DFI + L V F+FD+G G L +P + WH +R+ R
Sbjct: 831 VFLENL----GITDFIRIELRSPTTVTFSFDVGNGPFELSVHSPTHFNDNQWHHVRVERN 886
Query: 179 GRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVL 238
+ A LQVD P P Q + V + F+GCI+ +
Sbjct: 887 TKEASLQVDELP--------PKIQAAPTDGHVLLQLNSQLFVGGTATRQRGFLGCIRSLQ 938
Query: 239 INNHELNILGEAIQGVNVV-NCAHPCIT--QPCG-SGSCVPLYDGYKCVCTQSCKESHL- 293
+N L++ A V C C + + C G C G+ C C+ S
Sbjct: 939 LNGMALDLEERATVTPGVQPGCRGHCGSYGKLCRHGGKCREKPSGFFCDCSSSAYAGPFC 998
Query: 294 TEVMCASFDHGASFLHYLDPEIIHSSGLLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGL 353
++ + A F G+S ++ S + H D ++ G E + +T+ + L
Sbjct: 999 SKEISAYFGSGSSVIYNFQENYSLSKNSSFHAASFHGDMKL-GRE-TVKFNFRTTRAPSL 1056
Query: 354 ILWTGSSQSKDFLALGI-HNGYAHVMYXXXXXXX-XXXXXQTK-INNGVWHRLTVHRNF- 409
+L+ SS K++L++ I NG + Y K + +G H L + R
Sbjct: 1057 LLYM-SSFYKEYLSVIIAKNGSLQIRYRLNKYHEPDVISFDLKSMADGQLHHLKISREEG 1115
Query: 410 MVVMHGSSHTRSNK--SSKIEFKCL 432
MV + +TR SS EF +
Sbjct: 1116 MVFVEIDENTRRQTYLSSGTEFSAV 1140
Score = 84 (34.6 bits), Expect = 9.8e-13, Sum P(3) = 9.8e-13
Identities = 14/39 (35%), Positives = 22/39 (56%)
Query: 43 LEDKCNKTPCEHGGKCITTPGSSYCLCP-LGFTGDLCQT 80
+ D+C CEHGG+C + + +C C G+TG C +
Sbjct: 551 ISDRCLPNSCEHGGECSQSWSTFHCNCTNTGYTGATCHS 589
Score = 38 (18.4 bits), Expect = 9.8e-13, Sum P(3) = 9.8e-13
Identities = 19/91 (20%), Positives = 39/91 (42%)
Query: 436 RLHRTGKQCLIRIDTDYSMQSI--SGGKFEQLNTDSGLYVGGV---EDIEELTRSKYHHS 490
++ R + ID + Q+ SG +F + + L +G + D+++ T H
Sbjct: 1109 KISREEGMVFVEIDENTRRQTYLSSGTEFSAVKS---LVLGRMLEYSDVDQETALAAAHG 1165
Query: 491 FKGWISNLILSNDYQVKLPLSRSQGSSCQLT 521
F G +S + S+ +K L + + +T
Sbjct: 1166 FTGCLSAVQFSHIAPLKAALQPGRPAPVTVT 1196
>UNIPROTKB|F1LX29 [details] [associations]
symbol:Cntnap4 "Protein Cntnap4" species:10116 "Rattus
norvegicus" [GO:0007155 "cell adhesion" evidence=IEA]
InterPro:IPR000421 InterPro:IPR000742 Pfam:PF00754 PROSITE:PS01285
PROSITE:PS01286 PROSITE:PS50022 PROSITE:PS50026 SMART:SM00181
SMART:SM00231 INTERPRO:IPR002181 GO:GO:0007165 GO:GO:0007155
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 InterPro:IPR008979 SUPFAM:SSF49785
InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025 Gene3D:3.90.215.10
InterPro:IPR014716 SUPFAM:SSF56496 PROSITE:PS51406 Pfam:PF02210
IPI:IPI00366453 PRIDE:F1LX29 Ensembl:ENSRNOT00000015337
Uniprot:F1LX29
Length = 1242
Score = 177 (67.4 bits), Expect = 1.1e-12, Sum P(3) = 1.1e-12
Identities = 98/385 (25%), Positives = 153/385 (39%)
Query: 64 SSYCLCPLGFTGDLCQTRLDLQVPQFNG-SSYLRYQGL-GEQYLSLLDLTIVFKAIEPNG 121
++Y L PL GD R FN +SYL + GE LS D++ FK +G
Sbjct: 710 AAYKLGPLLCRGD----RPFWNAASFNTEASYLHFPTFHGE--LSA-DVSFYFKTTALSG 762
Query: 122 ILLYNGHRADGVGDFIALYLND-RYVDFTFDLGTGAATLRSSNPISLGE--WHKLRLTRT 178
+ L N G+ DFI + L V F+FD+G G L +P + WH +R+ R
Sbjct: 763 VFLENL----GITDFIRIELRSPTTVTFSFDVGNGPFELSVHSPTHFNDNQWHHVRVERN 818
Query: 179 GRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVL 238
+ A LQVD P P Q + V + F+GCI+ +
Sbjct: 819 TKEASLQVDELP--------PKIQAAPTDGHVLLQLNSQLFVGGTATRQRGFLGCIRSLQ 870
Query: 239 INNHELNILGEAIQGVNVV-NCAHPCIT--QPCG-SGSCVPLYDGYKCVCTQSCKESHL- 293
+N L++ A V C C + + C G C G+ C C+ S
Sbjct: 871 LNGMALDLEERATVTPGVQPGCRGHCGSYGKLCRHGGKCREKPSGFFCDCSSSAYAGPFC 930
Query: 294 TEVMCASFDHGASFLHYLDPEIIHSSGLLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGL 353
++ + A F G+S ++ S + H D ++ G E + +T+ + L
Sbjct: 931 SKEISAYFGSGSSVIYNFQENYSLSKNSSFHAASFHGDMKL-GRE-TVKFNFRTTRAPSL 988
Query: 354 ILWTGSSQSKDFLALGI-HNGYAHVMYXXXXXXX-XXXXXQTK-INNGVWHRLTVHRNF- 409
+L+ SS K++L++ I NG + Y K + +G H L + R
Sbjct: 989 LLYM-SSFYKEYLSVIIAKNGDLQIRYRLNKYHEPDVISFDLKSMADGQLHHLKISREEG 1047
Query: 410 MVVMHGSSHTRSNK--SSKIEFKCL 432
MV + +TR SS EF +
Sbjct: 1048 MVFVEIDENTRRQTYLSSGTEFSAV 1072
Score = 84 (34.6 bits), Expect = 1.1e-12, Sum P(3) = 1.1e-12
Identities = 14/39 (35%), Positives = 22/39 (56%)
Query: 43 LEDKCNKTPCEHGGKCITTPGSSYCLCP-LGFTGDLCQT 80
+ D+C CEHGG+C + + +C C G+TG C +
Sbjct: 483 ISDRCLPNSCEHGGECSQSWSTFHCNCTNTGYTGATCHS 521
Score = 38 (18.4 bits), Expect = 1.1e-12, Sum P(3) = 1.1e-12
Identities = 19/91 (20%), Positives = 39/91 (42%)
Query: 436 RLHRTGKQCLIRIDTDYSMQSI--SGGKFEQLNTDSGLYVGGV---EDIEELTRSKYHHS 490
++ R + ID + Q+ SG +F + + L +G + D+++ T H
Sbjct: 1041 KISREEGMVFVEIDENTRRQTYLSSGTEFSAVKS---LVLGRMLEYSDVDQETALAAAHG 1097
Query: 491 FKGWISNLILSNDYQVKLPLSRSQGSSCQLT 521
F G +S + S+ +K L + + +T
Sbjct: 1098 FTGCLSAVQFSHIAPLKAALQPGRPAPVTVT 1128
>UNIPROTKB|F1M3J7 [details] [associations]
symbol:Cntnap4 "Protein Cntnap4" species:10116 "Rattus
norvegicus" [GO:0007155 "cell adhesion" evidence=IEA]
InterPro:IPR000421 InterPro:IPR000742 Pfam:PF00754 PROSITE:PS01285
PROSITE:PS01286 PROSITE:PS50022 PROSITE:PS50026 SMART:SM00181
SMART:SM00231 INTERPRO:IPR002181 GO:GO:0007165 GO:GO:0030425
GO:GO:0007155 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 InterPro:IPR008979
SUPFAM:SSF49785 InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025
Gene3D:3.90.215.10 InterPro:IPR014716 SUPFAM:SSF56496
PROSITE:PS51406 Pfam:PF02210 GeneTree:ENSGT00560000076804
IPI:IPI00950084 Ensembl:ENSRNOT00000066057 Uniprot:F1M3J7
Length = 1242
Score = 177 (67.4 bits), Expect = 1.1e-12, Sum P(3) = 1.1e-12
Identities = 98/385 (25%), Positives = 153/385 (39%)
Query: 64 SSYCLCPLGFTGDLCQTRLDLQVPQFNG-SSYLRYQGL-GEQYLSLLDLTIVFKAIEPNG 121
++Y L PL GD R FN +SYL + GE LS D++ FK +G
Sbjct: 710 AAYKLGPLLCRGD----RPFWNAASFNTEASYLHFPTFHGE--LSA-DVSFYFKTTALSG 762
Query: 122 ILLYNGHRADGVGDFIALYLND-RYVDFTFDLGTGAATLRSSNPISLGE--WHKLRLTRT 178
+ L N G+ DFI + L V F+FD+G G L +P + WH +R+ R
Sbjct: 763 VFLENL----GITDFIRIELRSPTTVTFSFDVGNGPFELSVHSPTHFNDNQWHHVRVERN 818
Query: 179 GRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVL 238
+ A LQVD P P Q + V + F+GCI+ +
Sbjct: 819 TKEASLQVDELP--------PKIQAAPTDGHVLLQLNSQLFVGGTATRQRGFLGCIRSLQ 870
Query: 239 INNHELNILGEAIQGVNVV-NCAHPCIT--QPCG-SGSCVPLYDGYKCVCTQSCKESHL- 293
+N L++ A V C C + + C G C G+ C C+ S
Sbjct: 871 LNGMALDLEERATVTPGVQPGCRGHCGSYGKLCRHGGKCREKPSGFFCDCSSSAYAGPFC 930
Query: 294 TEVMCASFDHGASFLHYLDPEIIHSSGLLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGL 353
++ + A F G+S ++ S + H D ++ G E + +T+ + L
Sbjct: 931 SKEISAYFGSGSSVIYNFQENYSLSKNSSFHAASFHGDMKL-GRE-TVKFNFRTTRAPSL 988
Query: 354 ILWTGSSQSKDFLALGI-HNGYAHVMYXXXXXXX-XXXXXQTK-INNGVWHRLTVHRNF- 409
+L+ SS K++L++ I NG + Y K + +G H L + R
Sbjct: 989 LLYM-SSFYKEYLSVIIAKNGDLQIRYRLNKYHEPDVISFDLKSMADGQLHHLKISREEG 1047
Query: 410 MVVMHGSSHTRSNK--SSKIEFKCL 432
MV + +TR SS EF +
Sbjct: 1048 MVFVEIDENTRRQTYLSSGTEFSAV 1072
Score = 84 (34.6 bits), Expect = 1.1e-12, Sum P(3) = 1.1e-12
Identities = 14/39 (35%), Positives = 22/39 (56%)
Query: 43 LEDKCNKTPCEHGGKCITTPGSSYCLCP-LGFTGDLCQT 80
+ D+C CEHGG+C + + +C C G+TG C +
Sbjct: 483 ISDRCLPNSCEHGGECSQSWSTFHCNCTNTGYTGATCHS 521
Score = 38 (18.4 bits), Expect = 1.1e-12, Sum P(3) = 1.1e-12
Identities = 19/91 (20%), Positives = 39/91 (42%)
Query: 436 RLHRTGKQCLIRIDTDYSMQSI--SGGKFEQLNTDSGLYVGGV---EDIEELTRSKYHHS 490
++ R + ID + Q+ SG +F + + L +G + D+++ T H
Sbjct: 1041 KISREEGMVFVEIDENTRRQTYLSSGTEFSAVKS---LVLGRMLEYSDVDQETALAAAHG 1097
Query: 491 FKGWISNLILSNDYQVKLPLSRSQGSSCQLT 521
F G +S + S+ +K L + + +T
Sbjct: 1098 FTGCLSAVQFSHIAPLKAALQPGRPAPVTVT 1128
>UNIPROTKB|G5E9G7 [details] [associations]
symbol:NRXN2 "Neurexin-2" species:9606 "Homo sapiens"
[GO:0007269 "neurotransmitter secretion" evidence=IEA] [GO:0007416
"synapse assembly" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR000742 InterPro:IPR027160 PROSITE:PS50026
SMART:SM00181 GO:GO:0016021 EMBL:CH471076 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025 Pfam:PF02210
InterPro:IPR003585 SMART:SM00294 EMBL:AP001462 UniGene:Hs.372938
HGNC:HGNC:8009 ChiTaRS:NRXN2 PANTHER:PTHR10127:SF307 EMBL:AP001092
ProteinModelPortal:G5E9G7 SMR:G5E9G7 Ensembl:ENST00000409571
ArrayExpress:G5E9G7 Bgee:G5E9G7 Uniprot:G5E9G7
Length = 1705
Score = 192 (72.6 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 86/328 (26%), Positives = 143/328 (43%)
Query: 92 SSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFD 151
SSYL L + Y S+ L FK P+G+LL+N +G DFI + L Y+ + FD
Sbjct: 919 SSYLALATL-QAYASM-HLFFQFKTTAPDGLLLFNS--GNG-NDFIVIELVKGYIHYVFD 973
Query: 152 LGTGAATLR--SSNPISLGEWHKLRLTRTGRHAY-LQVDRFPSSQILSPGPFTQXXXXXX 208
LG G + ++ S P++ +WH + ++R + + L++D +Q S G
Sbjct: 974 LGNGPSLMKGNSDKPVNDNQWHNVVVSRDPGNVHTLKIDSRTVTQH-SNGA-RNLDLKGE 1031
Query: 209 XXXGGVPDYNIVS--PK-VKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVN--CAHP- 262
GG+ N+ S PK V + F GC+ V +N +++ +A+ + V C P
Sbjct: 1032 LYIGGLSK-NMFSNLPKLVASRDGFQGCLASVDLNGRLPDLIADALHRIGQVERGCDGPS 1090
Query: 263 --CITQPCGS-GSCVPLYDGYKCVCTQS------CKESHLTEVMCASFDHGASFLHYLDP 313
C + C + G C+ +DG+ C CT + C + T + F G + + Y P
Sbjct: 1091 TTCTEESCANQGVCLQQWDGFTCDCTMTSYGGPVCNDPGTTYI----FGKGGALITYTWP 1146
Query: 314 EIIHSSGLLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNG 373
S + +L V F T + +R+ S+SGL G D+L L I G
Sbjct: 1147 PNDRPSTRMD---RLAVGFS-THQRSAVLVRV--DSASGL----G-----DYLQLHIDQG 1191
Query: 374 YAHVMYXXXXXXXXXXXXQTKINNGVWH 401
V++ +++G +H
Sbjct: 1192 TVGVIFNVGTDDITIDEPNAIVSDGKYH 1219
Score = 170 (64.9 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 84/332 (25%), Positives = 143/332 (43%)
Query: 110 LTIVFKAIEPNGILLYN-GHRADG-VG--------DFIALYLNDRYVDFTFDLGTGAATL 159
+++ F+ EPNG+LL++ G RA G G D+ A+ L D ++ D+G+G L
Sbjct: 510 ISLDFRTTEPNGLLLFSQGRRAGGGAGSHSSAQRADYFAMELLDGHLYLLLDMGSGGIKL 569
Query: 160 R-SSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYN 218
R SS ++ GEW + R GR + V+ S+ L+ G GG+P+
Sbjct: 570 RASSRKVNDGEWCHVDFQRDGRKGSISVNS-RSTPFLATGDSEILDLESELYLGGLPEGG 628
Query: 219 IVS----PKV---KIKSSFIGCIQKVLIN--NHELNILGEAIQGVNVVN-CAHP----CI 264
V P+V +++ ++GC++ + I+ + +L L EA V V C+ C
Sbjct: 629 RVDLPLPPEVWTAALRAGYVGCVRDLFIDGRSRDLRGLAEAQGAVGVAPFCSRETLKQCA 688
Query: 265 TQPCGSGS-CVPLYDGYKCVCTQSCKESHLTEVMCASFDHGASFLHYLDPEIIHSSGLLH 323
+ PC +G C ++ + C C + L V C + A+ L Y G ++
Sbjct: 689 SAPCRNGGVCREGWNRFICDCIGT---GFLGRV-C---EREATVLSY--------DGSMY 733
Query: 324 YKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXX 383
K L T E ++ +R + + GL++ T S +S D L L + G +
Sbjct: 734 MKIMLPNAMH-TEAE-DVSLRFMSQRAYGLMMATTSRESADTLRLELDGGQMKLTVNLDC 791
Query: 384 XXXXXXXX---QT-----KINNGVWHRLTVHR 407
+T K+N+ WH + V R
Sbjct: 792 LRVGCAPSKGPETLFAGHKLNDNEWHTVRVVR 823
Score = 139 (54.0 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 42/159 (26%), Positives = 77/159 (48%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCPL-GFTGDLCQTRLDLQVPQFN-GSSYLRYQGL-GEQ 103
C + C + G C+ C C + + G +C + F G + + Y ++
Sbjct: 1093 CTEESCANQGVCLQQWDGFTCDCTMTSYGGPVCNDPGTTYI--FGKGGALITYTWPPNDR 1150
Query: 104 YLSLLD-LTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSS 162
+ +D L + F + + +L+ A G+GD++ L+++ V F++GT T+
Sbjct: 1151 PSTRMDRLAVGFSTHQRSAVLV-RVDSASGLGDYLQLHIDQGTVGVIFNVGTDDITIDEP 1209
Query: 163 NPI-SLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPF 200
N I S G++H +R TR+G +A LQVD +P ++ G F
Sbjct: 1210 NAIVSDGKYHVVRFTRSGGNATLQVDSWPVNERYPAGNF 1248
Score = 127 (49.8 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 40/159 (25%), Positives = 70/159 (44%)
Query: 39 SKECLEDKCNKTPCEHGGKCITTPGSSYCLC-PLGFTGDLCQTRLDLQVPQFNGSSYLRY 97
S+E L+ +C PC +GG C C C GF G +C+ + V ++GS Y++
Sbjct: 680 SRETLK-QCASAPCRNGGVCREGWNRFICDCIGTGFLGRVCER--EATVLSYDGSMYMKI 736
Query: 98 QGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDL----- 152
+ D+++ F + G+++ R D + L L+ + T +L
Sbjct: 737 MLPNAMHTEAEDVSLRFMSQRAYGLMMATTSRESA--DTLRLELDGGQMKLTVNLDCLRV 794
Query: 153 ----GTGAATLRSSNPISLGEWHKLRLTRTGRHAYLQVD 187
G TL + + ++ EWH +R+ R G+ L VD
Sbjct: 795 GCAPSKGPETLFAGHKLNDNEWHTVRVVRRGKSLQLSVD 833
Score = 126 (49.4 bits), Expect = 4.6e-09, Sum P(3) = 4.6e-09
Identities = 47/189 (24%), Positives = 84/189 (44%)
Query: 72 GFTGDLCQTRLDLQ--VPQFNGSSYLRYQGLGEQYLSLLD-LTIVFKAIEPNGILLYNGH 128
G GD+ Q + V F G+ + Y S D +T+ F+ ++ NG++L+ G
Sbjct: 273 GGAGDVHQPTKGKEEFVATFKGNEFFCYDLSHNPIQSSTDEITLAFRTLQRNGLMLHTGK 332
Query: 129 RADGVGDFIALYLNDRYVDFTFDLGTGA--ATLRSSN-PISLGEWHKLRLTRTGR----- 180
AD ++ L L V +LG+GA A + N + WH +R+TR R
Sbjct: 333 SAD----YVNLSLKSGAVWLVINLGSGAFEALVEPVNGKFNDNAWHDVRVTRNLRQHAGI 388
Query: 181 -HAY--LQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKV 237
HA + VD ++ + +T GG P+ + P + ++F+GC++ V
Sbjct: 389 GHAMVTISVDGILTTTGYTQEDYTMLGSDDFFYIGGSPNTADL-PGSPVSNNFMGCLKDV 447
Query: 238 LINNHELNI 246
+ N++ +
Sbjct: 448 VYKNNDFKL 456
Score = 110 (43.8 bits), Expect = 5.6e-06, Sum P(3) = 5.6e-06
Identities = 47/188 (25%), Positives = 75/188 (39%)
Query: 109 DLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGA-ATLRSSNPISL 167
+L+ + +LLY D DF+ L L D + F L ATL+ P++
Sbjct: 52 ELSFSLRTNATRALLLYLDDGGDC--DFLELLLVDGRLRLRFTLSCAEPATLQLDTPVAD 109
Query: 168 GEWHKLRLTRTGRHAYLQVD-RFPSSQILSPGPFTQXXXXXXXXXGGVP-DYNIVS---P 222
WH + LTR R L VD ++++ S Q GG+P D + +
Sbjct: 110 DRWHMVLLTRDARRTALAVDGEARAAEVRSKRREMQVASDLFV--GGIPPDVRLSALTLS 167
Query: 223 KVKIKSSFIGCIQKVLINNHELNILG-EAIQGVNVVNCAHPCITQPCGSGS-CVPLYDG- 279
VK + F G + + + +LG + ++G P PC +G C L G
Sbjct: 168 TVKYEPPFRGLLANLKLGERPPALLGSQGLRGATADPLCAPA-RNPCANGGLCTVLAPGE 226
Query: 280 YKCVCTQS 287
C C+ +
Sbjct: 227 VGCDCSHT 234
Score = 80 (33.2 bits), Expect = 4.6e-09, Sum P(3) = 4.6e-09
Identities = 17/66 (25%), Positives = 31/66 (46%)
Query: 344 RIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTK-INNGVWHR 402
+ KT++ GL+L+ S DF+ + + GY H ++ K +N+ WH
Sbjct: 938 QFKTTAPDGLLLFN-SGNGNDFIVIELVKGYIHYVFDLGNGPSLMKGNSDKPVNDNQWHN 996
Query: 403 LTVHRN 408
+ V R+
Sbjct: 997 VVVSRD 1002
Score = 67 (28.6 bits), Expect = 5.6e-06, Sum P(3) = 5.6e-06
Identities = 15/51 (29%), Positives = 27/51 (52%)
Query: 462 FEQLNTDSGLYVGGVEDIEELTRSKYHHSFKGWISNLILSNDYQVKLPLSR 512
+ L +D Y+GG + +L S ++F G + +++ N+ KL LSR
Sbjct: 411 YTMLGSDDFFYIGGSPNTADLPGSPVSNNFMGCLKDVVYKNN-DFKLELSR 460
Score = 65 (27.9 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 13/32 (40%), Positives = 16/32 (50%)
Query: 49 KTPCEHGGKC-ITTPGSSYCLCP-LGFTGDLC 78
+ PC +GG C + PG C C GF G C
Sbjct: 210 RNPCANGGLCTVLAPGEVGCDCSHTGFGGKFC 241
Score = 64 (27.6 bits), Expect = 5.6e-06, Sum P(3) = 5.6e-06
Identities = 18/70 (25%), Positives = 31/70 (44%)
Query: 341 IDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQT--KINNG 398
I + +T +GL+L TG +S D++ L + +G ++ K N+
Sbjct: 314 ITLAFRTLQRNGLMLHTG--KSADYVNLSLKSGAVWLVINLGSGAFEALVEPVNGKFNDN 371
Query: 399 VWHRLTVHRN 408
WH + V RN
Sbjct: 372 AWHDVRVTRN 381
Score = 54 (24.1 bits), Expect = 8.5e-07, Sum P(4) = 8.5e-07
Identities = 10/50 (20%), Positives = 23/50 (46%)
Query: 359 SSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGVWHRLTVHRN 408
S+Q D+ A+ + +G+ +++ K+N+G W + R+
Sbjct: 540 SAQRADYFAMELLDGHLYLLLDMGSGGIKLRASSRKVNDGEWCHVDFQRD 589
Score = 45 (20.9 bits), Expect = 8.5e-07, Sum P(4) = 8.5e-07
Identities = 12/40 (30%), Positives = 24/40 (60%)
Query: 439 RTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVED 478
R G++ I +++ S ++ G E L+ +S LY+GG+ +
Sbjct: 588 RDGRKGSISVNSR-STPFLATGDSEILDLESELYLGGLPE 626
Score = 38 (18.4 bits), Expect = 7.1e-10, Sum P(2) = 7.1e-10
Identities = 11/29 (37%), Positives = 20/29 (68%)
Query: 11 DDWNTVRVFRHRWDAWIQLN-DGNKIKGR 38
++W+TVRV R R + +QL+ D ++G+
Sbjct: 814 NEWHTVRVVR-RGKS-LQLSVDNVTVEGQ 840
>UNIPROTKB|Q9P2S2 [details] [associations]
symbol:NRXN2 "Neurexin-2" species:9606 "Homo sapiens"
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005246 "calcium channel regulator activity"
evidence=IEA] [GO:0007269 "neurotransmitter secretion"
evidence=IEA] [GO:0097118 "neuroligin clustering" evidence=ISS]
[GO:0097119 "postsynaptic density protein 95 clustering"
evidence=ISS] [GO:0097104 "postsynaptic membrane assembly"
evidence=ISS] [GO:0097116 "gephyrin clustering" evidence=ISS]
[GO:0050839 "cell adhesion molecule binding" evidence=ISS]
InterPro:IPR000742 InterPro:IPR027160 PROSITE:PS50026 SMART:SM00181
GO:GO:0016021 GO:GO:0046872 GO:GO:0007155 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 GO:GO:0050839 InterPro:IPR001791
SMART:SM00282 PROSITE:PS50025 GO:GO:0007269 GO:GO:0005246
Pfam:PF02210 InterPro:IPR003585 SMART:SM00294 GO:GO:0097119
GO:GO:0097104 GO:GO:0097116 eggNOG:NOG302266 HOGENOM:HOG000230481
HOVERGEN:HBG052670 KO:K07377 OrthoDB:EOG41G339 GO:GO:0097118
EMBL:AB035266 EMBL:AB023138 EMBL:AC044790 EMBL:BC150275
IPI:IPI00007921 IPI:IPI00185612 RefSeq:NP_055895.1
RefSeq:NP_620060.1 UniGene:Hs.372938 ProteinModelPortal:Q9P2S2
SMR:Q9P2S2 IntAct:Q9P2S2 MINT:MINT-1381393 STRING:Q9P2S2
PhosphoSite:Q9P2S2 DMDM:17369343 PaxDb:Q9P2S2 PRIDE:Q9P2S2
Ensembl:ENST00000265459 Ensembl:ENST00000377551
Ensembl:ENST00000377559 GeneID:9379 KEGG:hsa:9379 UCSC:uc001oas.3
UCSC:uc021qkw.1 CTD:9379 GeneCards:GC11M064373 HGNC:HGNC:8009
MIM:600566 neXtProt:NX_Q9P2S2 PharmGKB:PA31787 InParanoid:Q9P2S2
OMA:GGDCDFL ChiTaRS:NRXN2 GenomeRNAi:9379 NextBio:35140
ArrayExpress:Q9P2S2 Bgee:Q9P2S2 CleanEx:HS_NRXN2
Genevestigator:Q9P2S2 GermOnline:ENSG00000110076
PANTHER:PTHR10127:SF307 Uniprot:Q9P2S2
Length = 1712
Score = 192 (72.6 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 86/328 (26%), Positives = 143/328 (43%)
Query: 92 SSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFD 151
SSYL L + Y S+ L FK P+G+LL+N +G DFI + L Y+ + FD
Sbjct: 926 SSYLALATL-QAYASM-HLFFQFKTTAPDGLLLFNS--GNG-NDFIVIELVKGYIHYVFD 980
Query: 152 LGTGAATLR--SSNPISLGEWHKLRLTRTGRHAY-LQVDRFPSSQILSPGPFTQXXXXXX 208
LG G + ++ S P++ +WH + ++R + + L++D +Q S G
Sbjct: 981 LGNGPSLMKGNSDKPVNDNQWHNVVVSRDPGNVHTLKIDSRTVTQH-SNGA-RNLDLKGE 1038
Query: 209 XXXGGVPDYNIVS--PK-VKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVN--CAHP- 262
GG+ N+ S PK V + F GC+ V +N +++ +A+ + V C P
Sbjct: 1039 LYIGGLSK-NMFSNLPKLVASRDGFQGCLASVDLNGRLPDLIADALHRIGQVERGCDGPS 1097
Query: 263 --CITQPCGS-GSCVPLYDGYKCVCTQS------CKESHLTEVMCASFDHGASFLHYLDP 313
C + C + G C+ +DG+ C CT + C + T + F G + + Y P
Sbjct: 1098 TTCTEESCANQGVCLQQWDGFTCDCTMTSYGGPVCNDPGTTYI----FGKGGALITYTWP 1153
Query: 314 EIIHSSGLLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNG 373
S + +L V F T + +R+ S+SGL G D+L L I G
Sbjct: 1154 PNDRPSTRMD---RLAVGFS-THQRSAVLVRV--DSASGL----G-----DYLQLHIDQG 1198
Query: 374 YAHVMYXXXXXXXXXXXXQTKINNGVWH 401
V++ +++G +H
Sbjct: 1199 TVGVIFNVGTDDITIDEPNAIVSDGKYH 1226
Score = 170 (64.9 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 84/332 (25%), Positives = 143/332 (43%)
Query: 110 LTIVFKAIEPNGILLYN-GHRADG-VG--------DFIALYLNDRYVDFTFDLGTGAATL 159
+++ F+ EPNG+LL++ G RA G G D+ A+ L D ++ D+G+G L
Sbjct: 517 ISLDFRTTEPNGLLLFSQGRRAGGGAGSHSSAQRADYFAMELLDGHLYLLLDMGSGGIKL 576
Query: 160 R-SSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYN 218
R SS ++ GEW + R GR + V+ S+ L+ G GG+P+
Sbjct: 577 RASSRKVNDGEWCHVDFQRDGRKGSISVNS-RSTPFLATGDSEILDLESELYLGGLPEGG 635
Query: 219 IVS----PKV---KIKSSFIGCIQKVLIN--NHELNILGEAIQGVNVVN-CAHP----CI 264
V P+V +++ ++GC++ + I+ + +L L EA V V C+ C
Sbjct: 636 RVDLPLPPEVWTAALRAGYVGCVRDLFIDGRSRDLRGLAEAQGAVGVAPFCSRETLKQCA 695
Query: 265 TQPCGSGS-CVPLYDGYKCVCTQSCKESHLTEVMCASFDHGASFLHYLDPEIIHSSGLLH 323
+ PC +G C ++ + C C + L V C + A+ L Y G ++
Sbjct: 696 SAPCRNGGVCREGWNRFICDCIGT---GFLGRV-C---EREATVLSY--------DGSMY 740
Query: 324 YKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXX 383
K L T E ++ +R + + GL++ T S +S D L L + G +
Sbjct: 741 MKIMLPNAMH-TEAE-DVSLRFMSQRAYGLMMATTSRESADTLRLELDGGQMKLTVNLDC 798
Query: 384 XXXXXXXX---QT-----KINNGVWHRLTVHR 407
+T K+N+ WH + V R
Sbjct: 799 LRVGCAPSKGPETLFAGHKLNDNEWHTVRVVR 830
Score = 139 (54.0 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 42/159 (26%), Positives = 77/159 (48%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCPL-GFTGDLCQTRLDLQVPQFN-GSSYLRYQGL-GEQ 103
C + C + G C+ C C + + G +C + F G + + Y ++
Sbjct: 1100 CTEESCANQGVCLQQWDGFTCDCTMTSYGGPVCNDPGTTYI--FGKGGALITYTWPPNDR 1157
Query: 104 YLSLLD-LTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSS 162
+ +D L + F + + +L+ A G+GD++ L+++ V F++GT T+
Sbjct: 1158 PSTRMDRLAVGFSTHQRSAVLV-RVDSASGLGDYLQLHIDQGTVGVIFNVGTDDITIDEP 1216
Query: 163 NPI-SLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPF 200
N I S G++H +R TR+G +A LQVD +P ++ G F
Sbjct: 1217 NAIVSDGKYHVVRFTRSGGNATLQVDSWPVNERYPAGNF 1255
Score = 127 (49.8 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 40/159 (25%), Positives = 70/159 (44%)
Query: 39 SKECLEDKCNKTPCEHGGKCITTPGSSYCLC-PLGFTGDLCQTRLDLQVPQFNGSSYLRY 97
S+E L+ +C PC +GG C C C GF G +C+ + V ++GS Y++
Sbjct: 687 SRETLK-QCASAPCRNGGVCREGWNRFICDCIGTGFLGRVCER--EATVLSYDGSMYMKI 743
Query: 98 QGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDL----- 152
+ D+++ F + G+++ R D + L L+ + T +L
Sbjct: 744 MLPNAMHTEAEDVSLRFMSQRAYGLMMATTSRESA--DTLRLELDGGQMKLTVNLDCLRV 801
Query: 153 ----GTGAATLRSSNPISLGEWHKLRLTRTGRHAYLQVD 187
G TL + + ++ EWH +R+ R G+ L VD
Sbjct: 802 GCAPSKGPETLFAGHKLNDNEWHTVRVVRRGKSLQLSVD 840
Score = 115 (45.5 bits), Expect = 6.9e-08, Sum P(3) = 6.9e-08
Identities = 49/196 (25%), Positives = 85/196 (43%)
Query: 72 GFTGDLCQTRLDLQ--VPQFNGSSYLRYQGLGEQYLSLLD-LTIVFKAIEPNGILLYNGH 128
G GD+ Q + V F G+ + Y S D +T+ F+ ++ NG++L+ G
Sbjct: 273 GGAGDVHQPTKGKEEFVATFKGNEFFCYDLSHNPIQSSTDEITLAFRTLQRNGLMLHTGK 332
Query: 129 RADGVGDFIALYLNDRYVDFTFDLGTGA--ATLRSSN-PISLGEWHKLRLTRTGR----- 180
AD ++ L L V +LG+GA A + N + WH +R+TR R
Sbjct: 333 SAD----YVNLSLKSGAVWLVINLGSGAFEALVEPVNGKFNDNAWHDVRVTRNLRQHAGI 388
Query: 181 -HA------YL---QVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSPKVKIKSSF 230
HA YL VD ++ + +T GG P+ + P + ++F
Sbjct: 389 GHAMVNKLHYLVTISVDGILTTTGYTQEDYTMLGSDDFFYIGGSPNTADL-PGSPVSNNF 447
Query: 231 IGCIQKVLINNHELNI 246
+GC++ V+ N++ +
Sbjct: 448 MGCLKDVVYKNNDFKL 463
Score = 110 (43.8 bits), Expect = 1.1e-06, Sum P(3) = 1.1e-06
Identities = 47/188 (25%), Positives = 75/188 (39%)
Query: 109 DLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGA-ATLRSSNPISL 167
+L+ + +LLY D DF+ L L D + F L ATL+ P++
Sbjct: 52 ELSFSLRTNATRALLLYLDDGGDC--DFLELLLVDGRLRLRFTLSCAEPATLQLDTPVAD 109
Query: 168 GEWHKLRLTRTGRHAYLQVD-RFPSSQILSPGPFTQXXXXXXXXXGGVP-DYNIVS---P 222
WH + LTR R L VD ++++ S Q GG+P D + +
Sbjct: 110 DRWHMVLLTRDARRTALAVDGEARAAEVRSKRREMQVASDLFV--GGIPPDVRLSALTLS 167
Query: 223 KVKIKSSFIGCIQKVLINNHELNILG-EAIQGVNVVNCAHPCITQPCGSGS-CVPLYDG- 279
VK + F G + + + +LG + ++G P PC +G C L G
Sbjct: 168 TVKYEPPFRGLLANLKLGERPPALLGSQGLRGATADPLCAPA-RNPCANGGLCTVLAPGE 226
Query: 280 YKCVCTQS 287
C C+ +
Sbjct: 227 VGCDCSHT 234
Score = 80 (33.2 bits), Expect = 6.9e-08, Sum P(3) = 6.9e-08
Identities = 17/66 (25%), Positives = 31/66 (46%)
Query: 344 RIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTK-INNGVWHR 402
+ KT++ GL+L+ S DF+ + + GY H ++ K +N+ WH
Sbjct: 945 QFKTTAPDGLLLFN-SGNGNDFIVIELVKGYIHYVFDLGNGPSLMKGNSDKPVNDNQWHN 1003
Query: 403 LTVHRN 408
+ V R+
Sbjct: 1004 VVVSRD 1009
Score = 71 (30.1 bits), Expect = 1.1e-06, Sum P(3) = 1.1e-06
Identities = 23/86 (26%), Positives = 36/86 (41%)
Query: 341 IDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQT--KINNG 398
I + +T +GL+L TG +S D++ L + +G ++ K N+
Sbjct: 314 ITLAFRTLQRNGLMLHTG--KSADYVNLSLKSGAVWLVINLGSGAFEALVEPVNGKFNDN 371
Query: 399 VWHRLTVHRNFMVVMH-GSSHTRSNK 423
WH + V RN H G H NK
Sbjct: 372 AWHDVRVTRNLR--QHAGIGHAMVNK 395
Score = 67 (28.6 bits), Expect = 1.1e-06, Sum P(3) = 1.1e-06
Identities = 15/51 (29%), Positives = 27/51 (52%)
Query: 462 FEQLNTDSGLYVGGVEDIEELTRSKYHHSFKGWISNLILSNDYQVKLPLSR 512
+ L +D Y+GG + +L S ++F G + +++ N+ KL LSR
Sbjct: 418 YTMLGSDDFFYIGGSPNTADLPGSPVSNNFMGCLKDVVYKNN-DFKLELSR 467
Score = 65 (27.9 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 13/32 (40%), Positives = 16/32 (50%)
Query: 49 KTPCEHGGKC-ITTPGSSYCLCP-LGFTGDLC 78
+ PC +GG C + PG C C GF G C
Sbjct: 210 RNPCANGGLCTVLAPGEVGCDCSHTGFGGKFC 241
Score = 54 (24.1 bits), Expect = 1.2e-05, Sum P(4) = 1.2e-05
Identities = 10/50 (20%), Positives = 23/50 (46%)
Query: 359 SSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGVWHRLTVHRN 408
S+Q D+ A+ + +G+ +++ K+N+G W + R+
Sbjct: 547 SAQRADYFAMELLDGHLYLLLDMGSGGIKLRASSRKVNDGEWCHVDFQRD 596
Score = 45 (20.9 bits), Expect = 1.2e-05, Sum P(4) = 1.2e-05
Identities = 12/40 (30%), Positives = 24/40 (60%)
Query: 439 RTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVED 478
R G++ I +++ S ++ G E L+ +S LY+GG+ +
Sbjct: 595 RDGRKGSISVNSR-STPFLATGDSEILDLESELYLGGLPE 633
Score = 38 (18.4 bits), Expect = 7.1e-10, Sum P(2) = 7.1e-10
Identities = 11/29 (37%), Positives = 20/29 (68%)
Query: 11 DDWNTVRVFRHRWDAWIQLN-DGNKIKGR 38
++W+TVRV R R + +QL+ D ++G+
Sbjct: 821 NEWHTVRVVR-RGKS-LQLSVDNVTVEGQ 847
>UNIPROTKB|F1PSE5 [details] [associations]
symbol:F1PSE5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007155 "cell adhesion" evidence=IEA]
InterPro:IPR000421 InterPro:IPR000742 Pfam:PF00754 PROSITE:PS01285
PROSITE:PS01286 PROSITE:PS50022 PROSITE:PS50026 SMART:SM00181
SMART:SM00231 GO:GO:0007155 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 InterPro:IPR008979
SUPFAM:SSF49785 InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025
Pfam:PF02210 GeneTree:ENSGT00560000076804 EMBL:AAEX03000623
Ensembl:ENSCAFT00000003391 OMA:FNDDRWH Uniprot:F1PSE5
Length = 1294
Score = 177 (67.4 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 96/365 (26%), Positives = 146/365 (40%)
Query: 64 SSYCLCPLGFTGDLCQTRLDL-QVPQFNG-SSYLRYQGL-GEQYLSLLDLTIVFKAIEPN 120
++Y L PL LCQ FN +SYL + GE LS D++ FK P+
Sbjct: 781 AAYALGPL-----LCQGDNSFWNSASFNTETSYLHFPTFRGE--LSA-DVSFFFKTTAPS 832
Query: 121 GILLYNGHRADGVGDFIALYLN-DRYVDFTFDLGTGAA--TLRSSNPISLGEWHKLRLTR 177
G+ + N G+ DFI L L V F+FD+G G T+RS P + WH +R R
Sbjct: 833 GVFVENL----GITDFIRLELQAPAEVTFSFDVGNGRCEVTVRSPTPFNDDRWHHVRAER 888
Query: 178 TGRHAYLQVDRFPSSQILSPGP-FTQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQK 236
+ A LQVD+ P+ +P + GG + F+GCI+
Sbjct: 889 NVKEASLQVDQLPTRTQPAPADGHARLQLNSQLFVGGTATR---------QRGFLGCIRS 939
Query: 237 VLINNHELNILGEAIQGVNVV-NCAHPCITQP--CGSGS-CVPLYDGYKCVCTQSCKESH 292
+ +N L++ A V C C + C +G C G C C S E
Sbjct: 940 LRLNGLALDLEERATMTPGVEPGCPGHCSSYEHLCRNGGRCRERPRGVACDCAFSAYEGP 999
Query: 293 LTE-VMCASFDHGASFLHYLDPEI-IHSSGLLHYKFQLHVDFRITGYEFNIDMRIKTSSS 350
E VM + L +I +H L F H D + G + R T+ +
Sbjct: 1000 FCESVMLEVVSWKQHWEETLLEDIRLHLRSSLAAIF--HEDLTLAGEIATLSFR--TTGT 1055
Query: 351 SGLILWTGSSQSKDFLALGIH-NGYAHVMYXXXXXXX--XXXXXQTKINNGVWHRLTVHR 407
L+L+ SS +++L++ + NG + Y + +G H++ +HR
Sbjct: 1056 PSLLLYV-SSFYEEYLSVILAPNGSLQIRYKLDKHHEPDVFNFGFKNLADGQLHQVKIHR 1114
Query: 408 NFMVV 412
VV
Sbjct: 1115 EAAVV 1119
Score = 78 (32.5 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 16/41 (39%), Positives = 23/41 (56%)
Query: 43 LEDKCNKTPCEHGGKCITTPGSSYCLCP-LGFTGDLCQTRL 82
L D+C + CEHGG+C + + C C G+TG C + L
Sbjct: 552 LMDRCLPSYCEHGGECSQSWDTFSCDCAHTGYTGATCHSFL 592
>UNIPROTKB|F1MYL5 [details] [associations]
symbol:F1MYL5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007155 "cell adhesion" evidence=IEA]
InterPro:IPR000421 InterPro:IPR000742 PROSITE:PS01286
PROSITE:PS50022 PROSITE:PS50026 SMART:SM00181 INTERPRO:IPR002181
GO:GO:0007165 GO:GO:0007155 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 InterPro:IPR008979
SUPFAM:SSF49785 InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025
SUPFAM:SSF56496 PROSITE:PS51406 Pfam:PF02210
GeneTree:ENSGT00560000076804 OMA:NTENFAN EMBL:DAAA02005291
EMBL:DAAA02005292 EMBL:DAAA02005293 EMBL:DAAA02005294
EMBL:DAAA02005295 EMBL:DAAA02005296 EMBL:DAAA02005297
EMBL:DAAA02005298 EMBL:DAAA02005299 EMBL:DAAA02005300
EMBL:DAAA02005301 EMBL:DAAA02005302 EMBL:DAAA02005303
EMBL:DAAA02005304 EMBL:DAAA02005305 EMBL:DAAA02005306
EMBL:DAAA02005307 EMBL:DAAA02005308 EMBL:DAAA02005309
EMBL:DAAA02005310 IPI:IPI00723450 Ensembl:ENSBTAT00000045240
Uniprot:F1MYL5
Length = 1191
Score = 172 (65.6 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 78/304 (25%), Positives = 125/304 (41%)
Query: 146 VDFTFDLGTGAATLRSSNPISLGE--WHKLRLTRTGRHAYLQVDRFP--SSQILSPGPFT 201
+ F D+G G L +P SL + WH +R R + LQVD P + + G F
Sbjct: 731 ITFAIDVGNGPIELIVQSPSSLNDNQWHYVRAERNLKETSLQVDNLPRMTRETSEEGHFR 790
Query: 202 -QXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEA--IQGVNVVN 258
Q GG S + K F+GCI+ + +N +L++ A GV
Sbjct: 791 LQLNSQLFVGSGGT------SSRQK---GFLGCIRSLHLNGQKLDLEERAKVTSGVRP-G 840
Query: 259 CAHPCITQP--C-GSGSCVPLYDGYKCVCTQSCKESHLTEV-MCASFDHGASFLH-YLDP 313
C C + C G CV + GY C CT S E + + A F+ G S + + +P
Sbjct: 841 CPGHCSSYGSICHNGGKCVEKHSGYFCDCTSSPYEGPFCKKEVSAVFEAGTSVTYMFQEP 900
Query: 314 EIIHSSGLLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGI-HN 372
+ + L ++ D ++ + NI + T+ + L+L+ SS S+DFLA+ + N
Sbjct: 901 YPVTKNVSLSSS-AIYADAALS--KENIALSFVTAQAPSLLLYINSS-SQDFLAVLLCKN 956
Query: 373 GYAHVMYXXXXXXXXXXXXQTK-INNGVWHRLTVHRN---FMVVMHGSSHTRSNKSSKIE 428
G V T+ N H L ++R + M N S ++E
Sbjct: 957 GSLQVRSQLNKEETHVFTINTENFANRRLHHLKINREGRGLTIQMDQQLRLSYNFSPEVE 1016
Query: 429 FKCL 432
F+ +
Sbjct: 1017 FRAM 1020
Score = 125 (49.1 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 51/201 (25%), Positives = 85/201 (42%)
Query: 86 VPQFNGSSYLRYQGLGEQYLSLLD--LTIVFKAIEPNGILLYN-GHRADGVGDFIALYLN 142
+P F+ ++ L Y + + LD +++ FK+++ +G+L + G R GD I L L
Sbjct: 54 LPLFDMATSLLYLKFSKFLMKQLDQVISLKFKSMQGDGVLFHGEGQR----GDHITLELQ 109
Query: 143 DRYVDFTFDLGTGAATLRSSNP-ISLGE------WHKLRLTRTGRHAYLQVDRFPSSQIL 195
+ +L L SS P +LG WH + L R G+H VDR +
Sbjct: 110 RGRLALHLNLDDSKPRLSSSPPSATLGSLLDDQHWHSVLLERVGKHVNFTVDRH-TQHFR 168
Query: 196 SPGPFTQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVN 255
+ G GG+P P +K +F GCI+ + N +NI+ A + +
Sbjct: 169 TKGEADALDIDYELSFGGIPVPG--KPGTFLKKNFHGCIENLYYNG--VNIIDLAKRRKH 224
Query: 256 VVNCAHPCITQPCGSGSCVPL 276
+ +T C VP+
Sbjct: 225 QIYTVGN-VTFSCSEPQIVPI 244
Score = 82 (33.9 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 15/41 (36%), Positives = 21/41 (51%)
Query: 43 LEDKCNKTPCEHGGKCITTPGSSYCLCP-LGFTGDLCQTRL 82
++D+C CEHGG C + + YC C G+ G C L
Sbjct: 422 IKDRCLPNYCEHGGSCSQSWTTFYCNCTDTGYVGATCHNSL 462
Score = 69 (29.3 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 13/67 (19%), Positives = 31/67 (46%)
Query: 340 NIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGV 399
++ + +T + GL+L T S+ L L + +G ++ +N+G+
Sbjct: 266 SVSFQFRTWNKDGLLLSTRLSEGSGTLLLSLEDGTLRLVIQKMTERAAEILTGRDLNDGL 325
Query: 400 WHRLTVH 406
WH ++++
Sbjct: 326 WHSVSIN 332
Score = 38 (18.4 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 8/27 (29%), Positives = 15/27 (55%)
Query: 495 ISNLILSNDYQVKLPLSRSQGSSCQLT 521
+S +L N+ +VKL S + ++T
Sbjct: 706 VSGTVLENNLEVKLLASLEVSAPSEIT 732
>MGI|MGI:3646013 [details] [associations]
symbol:Cntnap5c "contactin associated protein-like 5C"
species:10090 "Mus musculus" [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR000421
InterPro:IPR000742 Pfam:PF00754 PROSITE:PS01285 PROSITE:PS01286
PROSITE:PS50022 PROSITE:PS50026 SMART:SM00181 SMART:SM00231
MGI:MGI:3646013 INTERPRO:IPR002181 GO:GO:0016021 GO:GO:0007165
GO:GO:0007155 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 InterPro:IPR008979 SUPFAM:SSF49785
InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025 SUPFAM:SSF56496
PROSITE:PS00514 PROSITE:PS51406 Pfam:PF02210 HOVERGEN:HBG057718
eggNOG:NOG291100 HOGENOM:HOG000230964 GeneTree:ENSGT00560000076804
OrthoDB:EOG441Q9K EMBL:AC118684 EMBL:AC120548 EMBL:AC122209
EMBL:AC127557 EMBL:AC154498 EMBL:CT025622 EMBL:CT025736
EMBL:BN000867 IPI:IPI00624911 RefSeq:NP_001075122.1
UniGene:Mm.391030 ProteinModelPortal:Q0V8T7 SMR:Q0V8T7 PRIDE:Q0V8T7
DNASU:620292 Ensembl:ENSMUST00000076038 GeneID:620292
KEGG:mmu:620292 UCSC:uc008dew.1 CTD:620292 InParanoid:Q0V8T7
OMA:KEAICIN NextBio:415135 Bgee:Q0V8T7 CleanEx:MM_CNTNAP5C
Genevestigator:Q0V8T7 Uniprot:Q0V8T7
Length = 1305
Score = 165 (63.1 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 81/331 (24%), Positives = 136/331 (41%)
Query: 92 SSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLND-RYVDFTF 150
+S+L + ++ + D+ FK +G+ L G+ DF+ L ++ V F
Sbjct: 799 ASFLHFPTFRVEFSA--DIFFFFKTTALSGVFL----EILGIKDFLRLEMSSPSEVIFAI 852
Query: 151 DLGTGAATL--RSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSS--QILSPGPFTQXXXX 206
D+G G L +S P++ +WH +R R + LQVD P S + G F Q
Sbjct: 853 DVGNGPIDLLVQSPYPLNDNQWHYIRAERNLKETSLQVDNLPQSMREASEEGHF-QFQLN 911
Query: 207 XXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLIN--NHELNILGEAIQGVNVVNCAHPCI 264
GG K + F GCI+ + +N N +L + GV C C
Sbjct: 912 SQLFVGG---------KSSRQKGFFGCIRSLHLNGQNIDLEERAKVTSGVRP-GCPGHCS 961
Query: 265 T--QPC-GSGSCVPLYDGYKCVCTQSCKESHLTEV-MCASFDHGASFLH-YLDPEIIHSS 319
+ + C G CV + GY C CT S E + + A FD S + + +P + +
Sbjct: 962 SYGRNCQNGGKCVEKHIGYSCDCTNSPYEGPFCQKEISALFDSDTSVTYMFQEPYSVTKN 1021
Query: 320 GLLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIH-NGYAHVM 378
L ++ D E I + T+ + L+L+ S S++FLA+ + NG +
Sbjct: 1022 TNLSSS-AIYTD-TAPSKEI-IMLSFMTAQAPTLLLYLNFS-SQNFLAILLSWNGSLQIH 1077
Query: 379 YXXXXXXXXXXXXQTK-INNGVWHRLTVHRN 408
Y T+ + N H++ + R+
Sbjct: 1078 YQLSKEESHVFTINTENLANRRVHQVKMSRD 1108
Score = 137 (53.3 bits), Expect = 6.9e-07, Sum P(2) = 6.9e-07
Identities = 55/208 (26%), Positives = 93/208 (44%)
Query: 78 CQTRLDLQVPQFNGSSYLRYQGLGEQYLSLLD-LTIVFKAIEPNGILLYN-GHRADGVGD 135
C R D V F+G S L Y+ + +L D +++ FK+I+ +G+L + G R GD
Sbjct: 174 CSYRSD--VADFDGWSSLLYRFNQKTMSTLKDVISLKFKSIQRDGVLFHGEGQR----GD 227
Query: 136 FIALYLNDRYVDFTFDLGTGAATLRSSNPIS-LGE------WHKLRLTRTGRHAYLQVDR 188
I L L + + +L A + S+ P++ LG WH + L R G+ A VD+
Sbjct: 228 HITLELQNGRLALYLNLDDSKAQVSSTAPLATLGSLLDDQHWHSVLLERVGKQANFTVDK 287
Query: 189 FPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILG 248
+ + G GG+P + P +K +F GCI+ + N +NI+
Sbjct: 288 -NTQHFQTKGETDALDIDYELSFGGIPVPS--KPGTFLKKNFHGCIENLYYNG--VNIID 342
Query: 249 EAIQGVNVVNCAHPCITQPCGSGSCVPL 276
A + + + + +T C VP+
Sbjct: 343 LAKRRKHQIYSGN--VTFSCSEPQTVPI 368
Score = 90 (36.7 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 16/37 (43%), Positives = 22/37 (59%)
Query: 43 LEDKCNKTPCEHGGKCITTPGSSYCLCP-LGFTGDLC 78
++D+C CEHGG+C T + YC C G+TG C
Sbjct: 546 IKDRCLPNYCEHGGQCAQTWTNFYCNCSDTGYTGATC 582
Score = 64 (27.6 bits), Expect = 6.9e-07, Sum P(2) = 6.9e-07
Identities = 13/66 (19%), Positives = 30/66 (45%)
Query: 340 NIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGV 399
++ + +T + GL+L T S+ L L + G ++ + +N+G+
Sbjct: 390 SVSFQFRTWNEDGLLLSTELSEGSGTLLLILEGGTLRLLIKKLARHGTEIFTGSGLNDGM 449
Query: 400 WHRLTV 405
WH +++
Sbjct: 450 WHSVSI 455
>FB|FBgn0013997 [details] [associations]
symbol:Nrx-IV "Neurexin IV" species:7227 "Drosophila
melanogaster" [GO:0005886 "plasma membrane" evidence=ISS;IDA]
[GO:0008104 "protein localization" evidence=TAS] [GO:0007391
"dorsal closure" evidence=IMP;NAS;TAS] [GO:0005918 "septate
junction" evidence=NAS;TAS] [GO:0016080 "synaptic vesicle
targeting" evidence=NAS] [GO:0016081 "synaptic vesicle docking
involved in exocytosis" evidence=NAS] [GO:0004888 "transmembrane
signaling receptor activity" evidence=ISS] [GO:0008065
"establishment of blood-nerve barrier" evidence=NAS] [GO:0016021
"integral to membrane" evidence=NAS] [GO:0019991 "septate junction
assembly" evidence=IMP;NAS] [GO:0005887 "integral to plasma
membrane" evidence=NAS] [GO:0045216 "cell-cell junction
organization" evidence=TAS] [GO:0007163 "establishment or
maintenance of cell polarity" evidence=NAS] [GO:0035151 "regulation
of tube size, open tracheal system" evidence=IMP] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0005919 "pleated septate junction"
evidence=IDA] [GO:0060857 "establishment of glial blood-brain
barrier" evidence=IMP] [GO:0021682 "nerve maturation" evidence=IMP]
[GO:0008366 "axon ensheathment" evidence=IMP] [GO:0008039 "synaptic
target recognition" evidence=IMP] InterPro:IPR000421
InterPro:IPR000742 Pfam:PF00754 PROSITE:PS01285 PROSITE:PS01286
PROSITE:PS50022 PROSITE:PS50026 SMART:SM00181 SMART:SM00231
GO:GO:0008104 EMBL:AE014296 GO:GO:0005887 GO:GO:0007391
GO:GO:0060857 GO:GO:0007163 GO:GO:0035151 GO:GO:0019991
GO:GO:0007155 GO:GO:0048786 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 InterPro:IPR008979 SUPFAM:SSF49785
InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025 GO:GO:0016081
Pfam:PF02210 InterPro:IPR003585 SMART:SM00294 GO:GO:0008366
eggNOG:NOG291100 GO:GO:0021682 GO:GO:0016080 GO:GO:0072553
GO:GO:0097105 GeneTree:ENSGT00560000076996 GO:GO:0005919
EMBL:X86685 PIR:T13799 RefSeq:NP_524034.2 UniGene:Dm.1843
ProteinModelPortal:Q94887 SMR:Q94887 STRING:Q94887 PaxDb:Q94887
PRIDE:Q94887 EnsemblMetazoa:FBtr0075998 GeneID:39387
KEGG:dme:Dmel_CG6827 CTD:39387 FlyBase:FBgn0013997
InParanoid:Q94887 OrthoDB:EOG40RXWG PhylomeDB:Q94887
GenomeRNAi:39387 NextBio:813387 Bgee:Q94887 GermOnline:CG6827
Uniprot:Q94887
Length = 1284
Score = 169 (64.5 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 45/186 (24%), Positives = 85/186 (45%)
Query: 109 DLTIVFKAIEPNGILLYNGHRADGVGDFIALYLND-RYVDFTFDLGTG--AATLRSSNPI 165
D+ + F+ + N ++ + A G D+I L LN + F + G+G + +S +
Sbjct: 819 DIYLEFRTTQENSVIFH----ATGPTDYIKLSLNGGNKLQFQYQAGSGPLGVNVGTSYHL 874
Query: 166 SLGEWHKLRLTRTGRHAYLQVDRFPSSQILSP-GPFTQXXXXXXXXXGGVPDYNIVSPKV 224
+ WH + + R + A L VD +++ P GP G +Y
Sbjct: 875 NDNNWHTVSVERNRKEARLVVDGSIKAEVREPPGPVRALHLTSDLVIGATTEY------- 927
Query: 225 KIKSSFIGCIQKVLINNHELNILGEAIQGVNVVN--CAHPCITQPC-GSGSCVPLYDGYK 281
+ ++GCI+ +L+N +++ + +G+ ++ C C + PC +G+C+ YDGY
Sbjct: 928 --RDGYVGCIRALLLNGKMVDLKEYSKRGLYGISTGCVGRCESNPCLNNGTCIERYDGYS 985
Query: 282 CVCTQS 287
C C S
Sbjct: 986 CDCRWS 991
Score = 139 (54.0 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 43/155 (27%), Positives = 70/155 (45%)
Query: 89 FNGSSYLRYQGLGEQYLSLLD-LTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVD 147
FNG+ +RY E S + + FK NG+++Y+ R GD+ AL L D +
Sbjct: 194 FNGTGLVRYDLRREPITSTKESIRFRFKTAFANGVMMYS--RGTQ-GDYYALQLKDNKMV 250
Query: 148 FTFDLGTGAAT-LRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXX 206
DLG+ T L + + WH + ++R R VDR + G FT+
Sbjct: 251 LNLDLGSRVMTSLSVGSLLDDNVWHDVVISRNQRDIIFSVDRVIVRGRIQ-GEFTRLNLN 309
Query: 207 XXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINN 241
GGVP+ V + ++ +F GC++ + N+
Sbjct: 310 RELYLGGVPN---VQEGLIVQQNFSGCLENIYFNS 341
Score = 127 (49.8 bits), Expect = 0.00085, Sum P(2) = 0.00085
Identities = 51/252 (20%), Positives = 97/252 (38%)
Query: 27 IQLNDGNK--IKGRSKECLEDKCNKTPCEHGGKCITTPGSSYCLCPLG-FTGDLCQTRLD 83
+ L + +K + G S C+ +C PC + G CI C C F G +C +
Sbjct: 945 VDLKEYSKRGLYGISTGCV-GRCESNPCLNNGTCIERYDGYSCDCRWSAFKGPICADEIG 1003
Query: 84 LQVPQFNGSSYLRYQGLGEQYLSLLD-LTIVFKAIEPNGILLYNGHRADGVGDFIALYL- 141
+ + SS +RY+ G ++ + + + F P G LL G ++ G+++ + +
Sbjct: 1004 VNL---RSSSIIRYEFEGSFRSTIAENIRVGFTTTIPKGFLL--GFSSNLTGEYLTIQIS 1058
Query: 142 NDRYVDFTFDLG-TGAATLRSSNPISLGEWHKLRLTRT--GRHAYLQVDRFPSSQILSPG 198
N ++ FD G + LG++H + R G L+VD + P
Sbjct: 1059 NSGHLRCVFDFGFERQEIIFPKKHFGLGQYHDMHFMRKNGGSTVVLKVDNY------EPV 1112
Query: 199 PFTQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINN-HELNILGEAIQGVNVV 257
+ Y + + F+GC+ +V ++ + L ++ + NV
Sbjct: 1113 EYNFDIKASADAQFNNIQYMYIGKNESMTDGFVGCVSRVQFDDIYPLKLMFQQNPPKNVK 1172
Query: 258 NCAHPCITQPCG 269
+ CG
Sbjct: 1173 SLGTQLTEDFCG 1184
Score = 83 (34.3 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 14/37 (37%), Positives = 19/37 (51%)
Query: 45 DKCNKTPCEHGGKCITTPGSSYCLCP-LGFTGDLCQT 80
D+CN PC+H G C +C C G+ G +C T
Sbjct: 544 DRCNPNPCQHKGLCHQNSREFFCDCGHTGYAGAVCHT 580
Score = 47 (21.6 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 16/76 (21%), Positives = 33/76 (43%)
Query: 336 GYEFNIDMRIKTSSSSGLILW-TGSSQSKDFLALGIHNGYA-HVMYXXXXXXXXXXXXQT 393
G+ +I + +T+ + +I TG + D++ L ++ G Y +
Sbjct: 815 GHSGDIYLEFRTTQENSVIFHATGPT---DYIKLSLNGGNKLQFQYQAGSGPLGVNVGTS 871
Query: 394 -KINNGVWHRLTVHRN 408
+N+ WH ++V RN
Sbjct: 872 YHLNDNNWHTVSVERN 887
Score = 44 (20.5 bits), Expect = 0.00085, Sum P(2) = 0.00085
Identities = 12/31 (38%), Positives = 21/31 (67%)
Query: 11 DDWNTVRVFRHRWDAWIQLNDGNKIKGRSKE 41
++W+TV V R+R +A + + DG+ IK +E
Sbjct: 877 NNWHTVSVERNRKEARLVV-DGS-IKAEVRE 905
Score = 41 (19.5 bits), Expect = 9.1e-05, Sum P(2) = 9.1e-05
Identities = 16/64 (25%), Positives = 26/64 (40%)
Query: 450 TDYSMQSISGGKFEQLNTDSGLYVGGVEDIEELTRSKYHHSFKGWISNLILSNDYQVKLP 509
TDY S++GG Q +G GV + YH + W + + N + +L
Sbjct: 840 TDYIKLSLNGGNKLQFQYQAGSGPLGVN-----VGTSYHLNDNNWHTVSVERNRKEARLV 894
Query: 510 LSRS 513
+ S
Sbjct: 895 VDGS 898
>UNIPROTKB|E1BP10 [details] [associations]
symbol:SLIT1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050919 "negative chemotaxis" evidence=IEA] [GO:0048846
"axon extension involved in axon guidance" evidence=IEA]
[GO:0048495 "Roundabout binding" evidence=IEA] [GO:0040023
"establishment of nucleus localization" evidence=IEA] [GO:0033563
"dorsal/ventral axon guidance" evidence=IEA] [GO:0031290 "retinal
ganglion cell axon guidance" evidence=IEA] [GO:0022028 "tangential
migration from the subventricular zone to the olfactory bulb"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005509 "calcium ion
binding" evidence=IEA] InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 GO:GO:0005737 GO:GO:0005615 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0008045
PROSITE:PS01186 InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274
SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0040023 InterPro:IPR025875
Pfam:PF12799 GO:GO:0031290 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
Pfam:PF12661 GO:GO:0033563 Pfam:PF01463
GeneTree:ENSGT00700000104083 GO:GO:0022028 GO:GO:0050919
OMA:KCVHGKC EMBL:DAAA02058910 IPI:IPI00697614
Ensembl:ENSBTAT00000061296 Uniprot:E1BP10
Length = 1396
Score = 197 (74.4 bits), Expect = 2.8e-12, Sum P(2) = 2.8e-12
Identities = 70/244 (28%), Positives = 108/244 (44%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQYLS 106
C T C++G C+ C C GF G C+ +L L V + +YL++ L Q
Sbjct: 993 CEGTECQNGANCVDQGNGPVCQCLPGFGGPECE-KL-LSVNFVDRDTYLQFTDL--QNWP 1048
Query: 107 LLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGT-GAATLRSSNPI 165
++T+ E NGILLYNG D IA+ L +V ++D G+ ++ + S+ I
Sbjct: 1049 RANITLQVSTAEDNGILLYNGDN-----DHIAVELYQGHVRVSYDPGSYPSSAIYSTETI 1103
Query: 166 SLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVP-DYNIVSPKV 224
+ G++H + L + L +D + + G GG+P D N + ++
Sbjct: 1104 NDGQFHTVELVTFDQMVNLSIDGGSPMTMDNFGKHYTLNSDAPLYVGGMPVDVNSAAFRL 1163
Query: 225 -KIKS--SFIGCIQKVLINNHELNILGEAIQGVNVVNCAHPCITQPCGSGSCVP-LYDGY 280
+I + SF GCI+ + INN EL + VV PC C G C P G
Sbjct: 1164 WQILNGTSFHGCIRNLYINN-ELQDFTKTRMKPGVVPGCEPCRKLYCLHGICQPNATPGP 1222
Query: 281 KCVC 284
C C
Sbjct: 1223 VCHC 1226
Score = 99 (39.9 bits), Expect = 1.3e-08, Sum P(4) = 1.3e-08
Identities = 17/46 (36%), Positives = 24/46 (52%)
Query: 45 DKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQFN 90
D C + C +GG C+ GS C CPL ++G C+ +D P N
Sbjct: 869 DDCVEHSCANGGTCVDGVGSYTCQCPLQYSGRACELLVDFCAPDLN 914
Score = 98 (39.6 bits), Expect = 1.7e-08, Sum P(4) = 1.7e-08
Identities = 20/51 (39%), Positives = 24/51 (47%)
Query: 36 KGRSKECLEDKCNKTPCEHGGKCITTPGSSY---CLCPLGFTGDLCQTRLD 83
KGR E D C+ +PC +GG C + G C CP GF G C D
Sbjct: 819 KGRDCEVSLDSCSSSPCGNGGTCRSQEGEDAGFTCSCPTGFEGPTCGVDTD 869
Score = 93 (37.8 bits), Expect = 1.3e-06, Sum P(4) = 1.3e-06
Identities = 18/49 (36%), Positives = 25/49 (51%)
Query: 37 GRSKECLEDKC--NKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLD 83
GR+ E L D C + PC+H +C+ TP C C G+ G C + D
Sbjct: 899 GRACELLVDFCAPDLNPCQHEAQCVGTPDGPRCECAPGYAGGNCTEKQD 947
Score = 90 (36.7 bits), Expect = 2.7e-06, Sum P(4) = 2.7e-06
Identities = 13/37 (35%), Positives = 21/37 (56%)
Query: 44 EDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQT 80
+D C C++G +C+ CLC G++G LC+T
Sbjct: 946 QDDCRDHRCQNGAQCVDEANGYSCLCTQGYSGQLCET 982
Score = 89 (36.4 bits), Expect = 1.5e-07, Sum P(4) = 1.5e-07
Identities = 20/58 (34%), Positives = 27/58 (46%)
Query: 45 DKCNKTPCEHGGKCITTPGSSY-CLCPLGFTGDLCQTRLDL--QVPQFNGSSYLRYQG 99
D C +PC++ G C P Y C CP G+ G C+ LD P NG + +G
Sbjct: 789 DPCLSSPCQNQGTCRNDPLVGYRCACPSGYKGRDCEVSLDSCSSSPCGNGGTCRSQEG 846
Score = 76 (31.8 bits), Expect = 1.3e-08, Sum P(4) = 1.3e-08
Identities = 15/62 (24%), Positives = 31/62 (50%)
Query: 340 NIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGV 399
NI +++ T+ +G++L+ G + D +A+ ++ G+ V Y IN+G
Sbjct: 1051 NITLQVSTAEDNGILLYNGDN---DHIAVELYQGHVRVSYDPGSYPSSAIYSTETINDGQ 1107
Query: 400 WH 401
+H
Sbjct: 1108 FH 1109
Score = 71 (30.1 bits), Expect = 1.3e-08, Sum P(4) = 1.3e-08
Identities = 22/65 (33%), Positives = 32/65 (49%)
Query: 446 IRIDTDYSMQSISGGKFEQLNTDSGLYVGGVE-DIEELTRSKYH----HSFKGWISNLIL 500
+ ID M + GK LN+D+ LYVGG+ D+ + SF G I NL +
Sbjct: 1122 LSIDGGSPMTMDNFGKHYTLNSDAPLYVGGMPVDVNSAAFRLWQILNGTSFHGCIRNLYI 1181
Query: 501 SNDYQ 505
+N+ Q
Sbjct: 1182 NNELQ 1186
Score = 61 (26.5 bits), Expect = 1.3e-08, Sum P(4) = 1.3e-08
Identities = 13/35 (37%), Positives = 17/35 (48%)
Query: 253 GVNVVNCAHPCITQPCGSGS-CVPLYDGYKCVCTQ 286
G N C C +G+ CV +GY C+CTQ
Sbjct: 939 GGNCTEKQDDCRDHRCQNGAQCVDEANGYSCLCTQ 973
Score = 54 (24.1 bits), Expect = 2.8e-12, Sum P(2) = 2.8e-12
Identities = 11/24 (45%), Positives = 11/24 (45%)
Query: 262 PCITQPCGSGSCVPLYD-GYKCVC 284
PC C G CVPL Y C C
Sbjct: 1242 PCHGHKCVHGKCVPLDALSYSCQC 1265
Score = 47 (21.6 bits), Expect = 3.0e-07, Sum P(4) = 3.0e-07
Identities = 15/46 (32%), Positives = 18/46 (39%)
Query: 259 CAHPCITQPCG-SGSCVPLYDGYKCVCTQSCKESHLTEVMCASFDH 303
CA P + PC CV DG +C C + TE DH
Sbjct: 909 CA-PDLN-PCQHEAQCVGTPDGPRCECAPGYAGGNCTEKQDDCRDH 952
Score = 47 (21.6 bits), Expect = 3.0e-07, Sum P(4) = 3.0e-07
Identities = 12/52 (23%), Positives = 22/52 (42%)
Query: 262 PCITQPCGSGS-CVPLYDGYKCVCTQSCKESHLTEVMCASFDHGASFLHYLD 312
PC C +G+ CV +G C C +++ +F ++L + D
Sbjct: 992 PCEGTECQNGANCVDQGNGPVCQCLPGFGGPECEKLLSVNFVDRDTYLQFTD 1043
Score = 46 (21.3 bits), Expect = 4.9e-07, Sum P(4) = 4.9e-07
Identities = 8/23 (34%), Positives = 11/23 (47%)
Query: 263 CITQPCGSG-SCVPLYDGYKCVC 284
C+ C +G +CV Y C C
Sbjct: 871 CVEHSCANGGTCVDGVGSYTCQC 893
>UNIPROTKB|F8WB18 [details] [associations]
symbol:NRXN1 "Neurexin-1-beta" species:9606 "Homo sapiens"
[GO:0007269 "neurotransmitter secretion" evidence=IEA] [GO:0007416
"synapse assembly" evidence=IEA] [GO:0051965 "positive regulation
of synapse assembly" evidence=IEA] [GO:0090129 "positive regulation
of synapse maturation" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR000742 InterPro:IPR027158
PROSITE:PS50026 SMART:SM00181 InterPro:IPR000152 GO:GO:0016021
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 InterPro:IPR001791 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 Pfam:PF02210 InterPro:IPR003585 SMART:SM00294
PANTHER:PTHR10127:SF309 EMBL:AC007462 EMBL:AC007682 EMBL:AC009234
EMBL:AC068725 EMBL:AC069550 EMBL:AC078994 EMBL:AC068715
IPI:IPI00442299 HGNC:HGNC:8008 ChiTaRS:NRXN1 EMBL:AC007560
ProteinModelPortal:F8WB18 SMR:F8WB18 Ensembl:ENST00000406859
ArrayExpress:F8WB18 Bgee:F8WB18 Uniprot:F8WB18
Length = 1477
Score = 204 (76.9 bits), Expect = 2.9e-12, Sum P(2) = 2.9e-12
Identities = 84/322 (26%), Positives = 138/322 (42%)
Query: 92 SSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFD 151
SSY+ L + Y S+ L FK +G++LYN DG DFI + L Y+ + FD
Sbjct: 913 SSYVALATL-QAYTSM-HLFFQFKTTSLDGLILYNS--GDG-NDFIVVELVKGYLHYVFD 967
Query: 152 LGTGAATLR-SSN-PISLGEWHKLRLTRTGRHAY-LQVDRFPSSQILSPGPFTQXXXXXX 208
LG GA ++ SSN P++ +WH + ++R + + +++D ++QI +
Sbjct: 968 LGNGANLIKGSSNKPLNDNQWHNVMISRDTSNLHTVKIDTKITTQITAGA--RNLDLKSD 1025
Query: 209 XXXGGVPDYNIVS-PK-VKIKSSFIGCIQKVLINNHELNILGEAI--QGVNVVNCAHP-- 262
GGV S PK V K F GC+ V +N +++ +A+ G C P
Sbjct: 1026 LYIGGVAKETYKSLPKLVHAKEGFQGCLASVDLNGRLPDLISDALFCNGQIERGCEGPST 1085
Query: 263 -CITQPCGS-GSCVPLYDGYKCVCTQSCKESHLTEVMCASFDHGASFLHYLDPEIIHSSG 320
C C + G C+ +DG+ C C+ + L C D G +++ G
Sbjct: 1086 TCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPL----CN--DPGTTYI------FSKGGG 1133
Query: 321 LLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSK-DFLALGIHNGYAHVMY 379
+ YK+ + D T + + + T +++ SS D+L L IH G V +
Sbjct: 1134 QITYKWPPN-DRPSTRAD-RLAIGFSTVQKEAVLVRVDSSSGLGDYLELHIHQGKIGVKF 1191
Query: 380 XXXXXXXXXXXXQTKINNGVWH 401
IN+G +H
Sbjct: 1192 NVGTDDIAIEESNAIINDGKYH 1213
Score = 146 (56.5 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 43/159 (27%), Positives = 76/159 (47%)
Query: 36 KGRSKECLEDKCNKTPCEHGGKCITTPGSSYCLCPL-GFTGDLCQTRLDLQVPQFNGSSY 94
+G S C ED C+ G C+ C C + F+G LC + G
Sbjct: 1081 EGPSTTCQEDSCSNQ-----GVCLQQWDGFSCDCSMTSFSGPLCNDPGTTYIFS-KGGGQ 1134
Query: 95 LRYQGL-GEQYLSLLD-LTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDL 152
+ Y+ ++ + D L I F ++ +L+ + G+GD++ L+++ + F++
Sbjct: 1135 ITYKWPPNDRPSTRADRLAIGFSTVQKEAVLV-RVDSSSGLGDYLELHIHQGKIGVKFNV 1193
Query: 153 GTGAATLRSSNPI-SLGEWHKLRLTRTGRHAYLQVDRFP 190
GT + SN I + G++H +R TR+G +A LQVD +P
Sbjct: 1194 GTDDIAIEESNAIINDGKYHVVRFTRSGGNATLQVDSWP 1232
Score = 138 (53.6 bits), Expect = 1.8e-11, Sum P(4) = 1.8e-11
Identities = 47/185 (25%), Positives = 86/185 (46%)
Query: 75 GDLCQT-RLDLQVPQFNGSSYLRYQGLGEQYLSLLD-LTIVFKAIEPNGILLYNGHRADG 132
GD ++ R + + F GS Y Y S D +T+ FK ++ NG++L+ G AD
Sbjct: 271 GDQAKSKRKEEYIATFKGSEYFCYDLSQNPIQSSSDEITLSFKTLQRNGLMLHTGKSAD- 329
Query: 133 VGDFIALYLNDRYVDFTFDLGTGA--ATLRSSN-PISLGEWHKLRLTRTGR------HAY 183
++ L L + V +LG+GA A + N + WH +++TR R HA
Sbjct: 330 ---YVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNAWHDVKVTRNLRQHSGIGHAM 386
Query: 184 --LQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINN 241
+ VD ++ + +T GG P + P + ++F+GC+++V+ N
Sbjct: 387 VTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADL-PGSPVSNNFMGCLKEVVYKN 445
Query: 242 HELNI 246
+++ +
Sbjct: 446 NDVRL 450
Score = 132 (51.5 bits), Expect = 7.9e-11, Sum P(4) = 7.9e-11
Identities = 62/279 (22%), Positives = 116/279 (41%)
Query: 114 FKAIEPNGILLYN-G---HRADGVG------DFIALYLNDRYVDFTFDLGTGAATLRSS- 162
F+ EPNG++L++ G H+ D DF A+ + D ++ D+G+G +++
Sbjct: 508 FRTTEPNGLILFSHGKPRHQKDAKHPQMIKVDFFAIEMLDGHLYLLLDMGSGTIKIKALL 567
Query: 163 NPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYN--IV 220
++ GEW+ + R GR + V+ + +PG GG+P+ +V
Sbjct: 568 KKVNDGEWYHVDFQRDGRSGTISVNTL-RTPYTAPGESEILDLDDELYLGGLPENKAGLV 626
Query: 221 SPK----VKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNCAHPCITQPCGSGSCVPL 276
P + ++GCI+ + I+ +I Q V + A + C + P
Sbjct: 627 FPTEVWTALLNYGYVGCIRDLFIDGQSKDIR----QMAEVQSTAG--VKPSCSKETAKPC 680
Query: 277 YDGYKCVCTQSCKESHLTEVM-CASFDH-GASFLHYLDPEIIHSSGLLHYKFQLHVDFRI 334
C C++ V C+ + G S + ++ G + K QL V
Sbjct: 681 LSN-PCKNNGMCRDGWNRYVCDCSGTGYLGRSCER--EATVLSYDGSMFMKIQLPVVMH- 736
Query: 335 TGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNG 373
T E ++ +R ++ + G+++ T S S D L L + G
Sbjct: 737 TEAE-DVSLRFRSQRAYGILMATTSRDSADTLRLELDAG 774
Score = 119 (46.9 bits), Expect = 6.4e-09, Sum P(3) = 6.4e-09
Identities = 52/212 (24%), Positives = 88/212 (41%)
Query: 39 SKECLEDKCNKTPCEHGGKCITTPGSSYCLCP-LGFTGDLCQTRLDLQVPQFNGSSYLRY 97
SKE + C PC++ G C C C G+ G C+ + V ++GS +++
Sbjct: 673 SKETAKP-CLSNPCKNNGMCRDGWNRYVCDCSGTGYLGRSCER--EATVLSYDGSMFMKI 729
Query: 98 QGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDL----- 152
Q + D+++ F++ GIL+ R D D + L L+ V T +L
Sbjct: 730 QLPVVMHTEAEDVSLRFRSQRAYGILMATTSR-DSA-DTLRLELDAGRVKLTVNLDCIRI 787
Query: 153 ----GTGAATLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXX 208
G TL + ++ EWH +R+ R G+ L VD + G T+
Sbjct: 788 NCNSSKGPETLFAGYNLNDNEWHTVRVVRRGKSLKLTVDDQQAMTGQMAGDHTRLEFHNI 847
Query: 209 XXXGGVPDYNIVSPKVKIKSSFIGCIQKVLIN 240
G + + +S + S+FIG +Q + N
Sbjct: 848 ET-GIITERRYLS---SVPSNFIGHLQSLTFN 875
Score = 91 (37.1 bits), Expect = 5.8e-06, Sum P(3) = 5.8e-06
Identities = 42/198 (21%), Positives = 77/198 (38%)
Query: 56 GKCITTPGSSYCLC-PLGFTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQYLSLLDLTIVF 114
G + G + LC L G + L+ P G + R+ S +++
Sbjct: 2 GTALLQRGGCFLLCLSLLLLGCWAELGSGLEFPGAEGQ-WTRFPKWNACCES--EMSFQL 58
Query: 115 KAIEPNGILLYNGHRADGVGDFIALYLN-DRYVDFTFDLGTGA-ATLRSSNPISLGEWHK 172
K G++LY +G DF+ L L + +F + ATL + P++ G WH
Sbjct: 59 KTRSARGLVLYFDD--EGFCDFLELILTRGGRLQLSFSIFCAEPATLLADTPVNDGAWHS 116
Query: 173 LRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPD------YNIVSPKVKI 226
+R+ R R+ L +D+ + + GG+P + V+
Sbjct: 117 VRIRRQFRNTTLFIDQVEAKWVEVKSKRRDMTVFSGLFVGGLPPELRAAALKLTLASVRE 176
Query: 227 KSSFIGCIQKVLINNHEL 244
+ F G I+ V +N+ ++
Sbjct: 177 REPFKGWIRDVRVNSSQV 194
Score = 84 (34.6 bits), Expect = 1.8e-11, Sum P(4) = 1.8e-11
Identities = 18/66 (27%), Positives = 31/66 (46%)
Query: 344 RIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTK-INNGVWHR 402
+ KT+S GLIL+ S DF+ + + GY H ++ K +N+ WH
Sbjct: 932 QFKTTSLDGLILYN-SGDGNDFIVVELVKGYLHYVFDLGNGANLIKGSSNKPLNDNQWHN 990
Query: 403 LTVHRN 408
+ + R+
Sbjct: 991 VMISRD 996
Score = 73 (30.8 bits), Expect = 3.6e-05, Sum P(3) = 3.6e-05
Identities = 20/70 (28%), Positives = 31/70 (44%)
Query: 341 IDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQT--KINNG 398
I + KT +GL+L TG +S D++ L + NG ++ K N+
Sbjct: 308 ITLSFKTLQRNGLMLHTG--KSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDN 365
Query: 399 VWHRLTVHRN 408
WH + V RN
Sbjct: 366 AWHDVKVTRN 375
Score = 68 (29.0 bits), Expect = 3.6e-05, Sum P(3) = 3.6e-05
Identities = 16/51 (31%), Positives = 26/51 (50%)
Query: 462 FEQLNTDSGLYVGGVEDIEELTRSKYHHSFKGWISNLILSNDYQVKLPLSR 512
+ L +D YVGG +L S ++F G + ++ N+ V+L LSR
Sbjct: 405 YTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGCLKEVVYKNN-DVRLELSR 454
Score = 65 (27.9 bits), Expect = 1.8e-11, Sum P(4) = 1.8e-11
Identities = 25/88 (28%), Positives = 38/88 (43%)
Query: 446 IRIDTDYSMQSISGGKFEQLNTDSGLYVGGVEDIEELTRSKYHHSFKGWISNLILSNDYQ 505
++IDT + Q +G + L+ S LY+GGV + K H+ +G+ + S D
Sbjct: 1003 VKIDTKITTQITAGAR--NLDLKSDLYIGGVAKETYKSLPKLVHAKEGF-QGCLASVDLN 1059
Query: 506 VKLPLSRSQGSSCQLTCETLNTG-QVTC 532
+LP S C E G TC
Sbjct: 1060 GRLPDLISDALFCNGQIERGCEGPSTTC 1087
Score = 51 (23.0 bits), Expect = 3.1e-08, Sum P(4) = 3.1e-08
Identities = 9/45 (20%), Positives = 21/45 (46%)
Query: 364 DFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGVWHRLTVHRN 408
DF A+ + +G+ +++ K+N+G W+ + R+
Sbjct: 539 DFFAIEMLDGHLYLLLDMGSGTIKIKALLKKVNDGEWYHVDFQRD 583
Score = 47 (21.6 bits), Expect = 2.9e-12, Sum P(2) = 2.9e-12
Identities = 14/54 (25%), Positives = 21/54 (38%)
Query: 27 IQLNDGNKIKGRSKEC-LEDKCNKTPCEHGGKCITTPGSSYCLCP-LGFTGDLC 78
++L+D G C ++ C +GG C + C C GF G C
Sbjct: 202 VKLDDEPPNSGGGSPCEAGEEGEGGVCLNGGVCSVVDDQAVCDCSRTGFRGKDC 255
Score = 47 (21.6 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
Identities = 15/51 (29%), Positives = 27/51 (52%)
Query: 428 EFKCLSIQRLHRTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVED 478
E+ + QR R+G + + T Y+ + G+ E L+ D LY+GG+ +
Sbjct: 574 EWYHVDFQRDGRSGTISVNTLRTPYT----APGESEILDLDDELYLGGLPE 620
Score = 41 (19.5 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 8/28 (28%), Positives = 16/28 (57%)
Query: 11 DDWNTVRVFRHRWDAWIQLNDGNKIKGR 38
++W+TVRV R + ++D + G+
Sbjct: 807 NEWHTVRVVRRGKSLKLTVDDQQAMTGQ 834
>UNIPROTKB|Q9ULB1 [details] [associations]
symbol:NRXN1 "Neurexin-1" species:9606 "Homo sapiens"
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005246 "calcium channel regulator activity"
evidence=IEA] [GO:0007269 "neurotransmitter secretion"
evidence=IEA] [GO:0033130 "acetylcholine receptor binding"
evidence=IEA] [GO:0042734 "presynaptic membrane" evidence=IEA]
[GO:0051965 "positive regulation of synapse assembly" evidence=IEA]
[GO:0090129 "positive regulation of synapse maturation"
evidence=IEA] [GO:2000821 "regulation of grooming behavior"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0004872 "receptor activity" evidence=TAS] [GO:0005887 "integral
to plasma membrane" evidence=TAS] [GO:0007411 "axon guidance"
evidence=TAS] [GO:0009986 "cell surface" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IC] [GO:0051968 "positive regulation of
synaptic transmission, glutamatergic" evidence=ISS] [GO:0007612
"learning" evidence=ISS] [GO:0050885 "neuromuscular process
controlling balance" evidence=ISS] [GO:2000463 "positive regulation
of excitatory postsynaptic membrane potential" evidence=ISS]
[GO:0060134 "prepulse inhibition" evidence=ISS] [GO:0035176 "social
behavior" evidence=IMP] [GO:0071625 "vocalization behavior"
evidence=IMP] [GO:0097118 "neuroligin clustering" evidence=ISS]
[GO:0097119 "postsynaptic density protein 95 clustering"
evidence=ISS] [GO:0097109 "neuroligin family protein binding"
evidence=ISS] [GO:0097104 "postsynaptic membrane assembly"
evidence=ISS] [GO:0097116 "gephyrin clustering" evidence=ISS]
[GO:0050839 "cell adhesion molecule binding" evidence=ISS]
[GO:0030534 "adult behavior" evidence=ISS] InterPro:IPR000742
InterPro:IPR027158 PROSITE:PS50026 SMART:SM00181 InterPro:IPR000152
GO:GO:0007411 GO:GO:0009986 GO:GO:0005887 GO:GO:0046872
GO:GO:0030054 GO:GO:0007612 GO:GO:0050885 GO:GO:0007155
GO:GO:0045202 GO:GO:0051968 GO:GO:0060134 GO:GO:0004872
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0035176 PROSITE:PS01186
GO:GO:0030534 GO:GO:0050839 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 Orphanet:106 Pfam:PF02210
InterPro:IPR003585 SMART:SM00294 Orphanet:221150 GO:GO:0071625
Orphanet:3140 GO:GO:2000463 GO:GO:0097119 GO:GO:0097104
GO:GO:0097116 eggNOG:NOG302266 HOVERGEN:HBG052670 KO:K07377
OrthoDB:EOG41G339 PANTHER:PTHR10127:SF309 CTD:9378 EMBL:EF539882
EMBL:AB035356 EMBL:AB011150 EMBL:AC007462 EMBL:AC007682
EMBL:AC009234 EMBL:AC068725 EMBL:AC069550 EMBL:AC078994
EMBL:AC068715 IPI:IPI00442299 IPI:IPI00855821 IPI:IPI01010752
RefSeq:NP_001129131.1 RefSeq:NP_004792.1 RefSeq:NP_620072.1
UniGene:Hs.637685 ProteinModelPortal:Q9ULB1 SMR:Q9ULB1
IntAct:Q9ULB1 STRING:Q9ULB1 PhosphoSite:Q9ULB1 DMDM:17369704
PaxDb:Q9ULB1 PRIDE:Q9ULB1 Ensembl:ENST00000404971
Ensembl:ENST00000405472 Ensembl:ENST00000406316 GeneID:9378
KEGG:hsa:9378 UCSC:uc021vhg.1 UCSC:uc021vhh.1 GeneCards:GC02M050145
HGNC:HGNC:8008 MIM:600565 neXtProt:NX_Q9ULB1 PharmGKB:PA31786
ChiTaRS:NRXN1 GenomeRNAi:9378 NextBio:35134 ArrayExpress:Q9ULB1
Bgee:Q9ULB1 CleanEx:HS_NRXN1 Genevestigator:Q9ULB1 GO:GO:0097109
GO:GO:0097118 Uniprot:Q9ULB1
Length = 1477
Score = 204 (76.9 bits), Expect = 2.9e-12, Sum P(2) = 2.9e-12
Identities = 84/322 (26%), Positives = 138/322 (42%)
Query: 92 SSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFD 151
SSY+ L + Y S+ L FK +G++LYN DG DFI + L Y+ + FD
Sbjct: 913 SSYVALATL-QAYTSM-HLFFQFKTTSLDGLILYNS--GDG-NDFIVVELVKGYLHYVFD 967
Query: 152 LGTGAATLR-SSN-PISLGEWHKLRLTRTGRHAY-LQVDRFPSSQILSPGPFTQXXXXXX 208
LG GA ++ SSN P++ +WH + ++R + + +++D ++QI +
Sbjct: 968 LGNGANLIKGSSNKPLNDNQWHNVMISRDTSNLHTVKIDTKITTQITAGA--RNLDLKSD 1025
Query: 209 XXXGGVPDYNIVS-PK-VKIKSSFIGCIQKVLINNHELNILGEAI--QGVNVVNCAHP-- 262
GGV S PK V K F GC+ V +N +++ +A+ G C P
Sbjct: 1026 LYIGGVAKETYKSLPKLVHAKEGFQGCLASVDLNGRLPDLISDALFCNGQIERGCEGPST 1085
Query: 263 -CITQPCGS-GSCVPLYDGYKCVCTQSCKESHLTEVMCASFDHGASFLHYLDPEIIHSSG 320
C C + G C+ +DG+ C C+ + L C D G +++ G
Sbjct: 1086 TCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPL----CN--DPGTTYI------FSKGGG 1133
Query: 321 LLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSK-DFLALGIHNGYAHVMY 379
+ YK+ + D T + + + T +++ SS D+L L IH G V +
Sbjct: 1134 QITYKWPPN-DRPSTRAD-RLAIGFSTVQKEAVLVRVDSSSGLGDYLELHIHQGKIGVKF 1191
Query: 380 XXXXXXXXXXXXQTKINNGVWH 401
IN+G +H
Sbjct: 1192 NVGTDDIAIEESNAIINDGKYH 1213
Score = 146 (56.5 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 43/159 (27%), Positives = 76/159 (47%)
Query: 36 KGRSKECLEDKCNKTPCEHGGKCITTPGSSYCLCPL-GFTGDLCQTRLDLQVPQFNGSSY 94
+G S C ED C+ G C+ C C + F+G LC + G
Sbjct: 1081 EGPSTTCQEDSCSNQ-----GVCLQQWDGFSCDCSMTSFSGPLCNDPGTTYIFS-KGGGQ 1134
Query: 95 LRYQGL-GEQYLSLLD-LTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDL 152
+ Y+ ++ + D L I F ++ +L+ + G+GD++ L+++ + F++
Sbjct: 1135 ITYKWPPNDRPSTRADRLAIGFSTVQKEAVLV-RVDSSSGLGDYLELHIHQGKIGVKFNV 1193
Query: 153 GTGAATLRSSNPI-SLGEWHKLRLTRTGRHAYLQVDRFP 190
GT + SN I + G++H +R TR+G +A LQVD +P
Sbjct: 1194 GTDDIAIEESNAIINDGKYHVVRFTRSGGNATLQVDSWP 1232
Score = 134 (52.2 bits), Expect = 4.8e-11, Sum P(4) = 4.8e-11
Identities = 44/173 (25%), Positives = 80/173 (46%)
Query: 86 VPQFNGSSYLRYQGLGEQYLSLLD-LTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDR 144
+ F GS Y Y S D +T+ FK ++ NG++L+ G AD ++ L L +
Sbjct: 283 IATFKGSEYFCYDLSQNPIQSSSDEITLSFKTLQRNGLMLHTGKSAD----YVNLALKNG 338
Query: 145 YVDFTFDLGTGA--ATLRSSN-PISLGEWHKLRLTRTGR------HAY--LQVDRFPSSQ 193
V +LG+GA A + N + WH +++TR R HA + VD ++
Sbjct: 339 AVSLVINLGSGAFEALVEPVNGKFNDNAWHDVKVTRNLRQHSGIGHAMVTISVDGILTTT 398
Query: 194 ILSPGPFTQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNI 246
+ +T GG P + P + ++F+GC+++V+ N+++ +
Sbjct: 399 GYTQEDYTMLGSDDFFYVGGSPSTADL-PGSPVSNNFMGCLKEVVYKNNDVRL 450
Score = 132 (51.5 bits), Expect = 7.9e-11, Sum P(4) = 7.9e-11
Identities = 62/279 (22%), Positives = 116/279 (41%)
Query: 114 FKAIEPNGILLYN-G---HRADGVG------DFIALYLNDRYVDFTFDLGTGAATLRSS- 162
F+ EPNG++L++ G H+ D DF A+ + D ++ D+G+G +++
Sbjct: 508 FRTTEPNGLILFSHGKPRHQKDAKHPQMIKVDFFAIEMLDGHLYLLLDMGSGTIKIKALL 567
Query: 163 NPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYN--IV 220
++ GEW+ + R GR + V+ + +PG GG+P+ +V
Sbjct: 568 KKVNDGEWYHVDFQRDGRSGTISVNTL-RTPYTAPGESEILDLDDELYLGGLPENKAGLV 626
Query: 221 SPK----VKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNCAHPCITQPCGSGSCVPL 276
P + ++GCI+ + I+ +I Q V + A + C + P
Sbjct: 627 FPTEVWTALLNYGYVGCIRDLFIDGQSKDIR----QMAEVQSTAG--VKPSCSKETAKPC 680
Query: 277 YDGYKCVCTQSCKESHLTEVM-CASFDH-GASFLHYLDPEIIHSSGLLHYKFQLHVDFRI 334
C C++ V C+ + G S + ++ G + K QL V
Sbjct: 681 LSN-PCKNNGMCRDGWNRYVCDCSGTGYLGRSCER--EATVLSYDGSMFMKIQLPVVMH- 736
Query: 335 TGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNG 373
T E ++ +R ++ + G+++ T S S D L L + G
Sbjct: 737 TEAE-DVSLRFRSQRAYGILMATTSRDSADTLRLELDAG 774
Score = 119 (46.9 bits), Expect = 6.4e-09, Sum P(3) = 6.4e-09
Identities = 52/212 (24%), Positives = 88/212 (41%)
Query: 39 SKECLEDKCNKTPCEHGGKCITTPGSSYCLCP-LGFTGDLCQTRLDLQVPQFNGSSYLRY 97
SKE + C PC++ G C C C G+ G C+ + V ++GS +++
Sbjct: 673 SKETAKP-CLSNPCKNNGMCRDGWNRYVCDCSGTGYLGRSCER--EATVLSYDGSMFMKI 729
Query: 98 QGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDL----- 152
Q + D+++ F++ GIL+ R D D + L L+ V T +L
Sbjct: 730 QLPVVMHTEAEDVSLRFRSQRAYGILMATTSR-DSA-DTLRLELDAGRVKLTVNLDCIRI 787
Query: 153 ----GTGAATLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXX 208
G TL + ++ EWH +R+ R G+ L VD + G T+
Sbjct: 788 NCNSSKGPETLFAGYNLNDNEWHTVRVVRRGKSLKLTVDDQQAMTGQMAGDHTRLEFHNI 847
Query: 209 XXXGGVPDYNIVSPKVKIKSSFIGCIQKVLIN 240
G + + +S + S+FIG +Q + N
Sbjct: 848 ET-GIITERRYLS---SVPSNFIGHLQSLTFN 875
Score = 91 (37.1 bits), Expect = 5.8e-06, Sum P(3) = 5.8e-06
Identities = 42/198 (21%), Positives = 77/198 (38%)
Query: 56 GKCITTPGSSYCLC-PLGFTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQYLSLLDLTIVF 114
G + G + LC L G + L+ P G + R+ S +++
Sbjct: 2 GTALLQRGGCFLLCLSLLLLGCWAELGSGLEFPGAEGQ-WTRFPKWNACCES--EMSFQL 58
Query: 115 KAIEPNGILLYNGHRADGVGDFIALYLN-DRYVDFTFDLGTGA-ATLRSSNPISLGEWHK 172
K G++LY +G DF+ L L + +F + ATL + P++ G WH
Sbjct: 59 KTRSARGLVLYFDD--EGFCDFLELILTRGGRLQLSFSIFCAEPATLLADTPVNDGAWHS 116
Query: 173 LRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPD------YNIVSPKVKI 226
+R+ R R+ L +D+ + + GG+P + V+
Sbjct: 117 VRIRRQFRNTTLFIDQVEAKWVEVKSKRRDMTVFSGLFVGGLPPELRAAALKLTLASVRE 176
Query: 227 KSSFIGCIQKVLINNHEL 244
+ F G I+ V +N+ ++
Sbjct: 177 REPFKGWIRDVRVNSSQV 194
Score = 84 (34.6 bits), Expect = 4.8e-11, Sum P(4) = 4.8e-11
Identities = 18/66 (27%), Positives = 31/66 (46%)
Query: 344 RIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTK-INNGVWHR 402
+ KT+S GLIL+ S DF+ + + GY H ++ K +N+ WH
Sbjct: 932 QFKTTSLDGLILYN-SGDGNDFIVVELVKGYLHYVFDLGNGANLIKGSSNKPLNDNQWHN 990
Query: 403 LTVHRN 408
+ + R+
Sbjct: 991 VMISRD 996
Score = 73 (30.8 bits), Expect = 3.6e-05, Sum P(3) = 3.6e-05
Identities = 20/70 (28%), Positives = 31/70 (44%)
Query: 341 IDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQT--KINNG 398
I + KT +GL+L TG +S D++ L + NG ++ K N+
Sbjct: 308 ITLSFKTLQRNGLMLHTG--KSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDN 365
Query: 399 VWHRLTVHRN 408
WH + V RN
Sbjct: 366 AWHDVKVTRN 375
Score = 68 (29.0 bits), Expect = 3.6e-05, Sum P(3) = 3.6e-05
Identities = 16/51 (31%), Positives = 26/51 (50%)
Query: 462 FEQLNTDSGLYVGGVEDIEELTRSKYHHSFKGWISNLILSNDYQVKLPLSR 512
+ L +D YVGG +L S ++F G + ++ N+ V+L LSR
Sbjct: 405 YTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGCLKEVVYKNN-DVRLELSR 454
Score = 65 (27.9 bits), Expect = 4.8e-11, Sum P(4) = 4.8e-11
Identities = 25/88 (28%), Positives = 38/88 (43%)
Query: 446 IRIDTDYSMQSISGGKFEQLNTDSGLYVGGVEDIEELTRSKYHHSFKGWISNLILSNDYQ 505
++IDT + Q +G + L+ S LY+GGV + K H+ +G+ + S D
Sbjct: 1003 VKIDTKITTQITAGAR--NLDLKSDLYIGGVAKETYKSLPKLVHAKEGF-QGCLASVDLN 1059
Query: 506 VKLPLSRSQGSSCQLTCETLNTG-QVTC 532
+LP S C E G TC
Sbjct: 1060 GRLPDLISDALFCNGQIERGCEGPSTTC 1087
Score = 51 (23.0 bits), Expect = 8.4e-08, Sum P(4) = 8.4e-08
Identities = 9/45 (20%), Positives = 21/45 (46%)
Query: 364 DFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGVWHRLTVHRN 408
DF A+ + +G+ +++ K+N+G W+ + R+
Sbjct: 539 DFFAIEMLDGHLYLLLDMGSGTIKIKALLKKVNDGEWYHVDFQRD 583
Score = 47 (21.6 bits), Expect = 2.9e-12, Sum P(2) = 2.9e-12
Identities = 14/54 (25%), Positives = 21/54 (38%)
Query: 27 IQLNDGNKIKGRSKEC-LEDKCNKTPCEHGGKCITTPGSSYCLCP-LGFTGDLC 78
++L+D G C ++ C +GG C + C C GF G C
Sbjct: 202 VKLDDEPPNSGGGSPCEAGEEGEGGVCLNGGVCSVVDDQAVCDCSRTGFRGKDC 255
Score = 47 (21.6 bits), Expect = 5.0e-05, Sum P(3) = 5.0e-05
Identities = 15/51 (29%), Positives = 27/51 (52%)
Query: 428 EFKCLSIQRLHRTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVED 478
E+ + QR R+G + + T Y+ + G+ E L+ D LY+GG+ +
Sbjct: 574 EWYHVDFQRDGRSGTISVNTLRTPYT----APGESEILDLDDELYLGGLPE 620
Score = 41 (19.5 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 8/28 (28%), Positives = 16/28 (57%)
Query: 11 DDWNTVRVFRHRWDAWIQLNDGNKIKGR 38
++W+TVRV R + ++D + G+
Sbjct: 807 NEWHTVRVVRRGKSLKLTVDDQQAMTGQ 834
>UNIPROTKB|E7ERL8 [details] [associations]
symbol:NRXN1 "Neurexin-1-beta" species:9606 "Homo sapiens"
[GO:0007269 "neurotransmitter secretion" evidence=IEA] [GO:0007416
"synapse assembly" evidence=IEA] [GO:0051965 "positive regulation
of synapse assembly" evidence=IEA] [GO:0090129 "positive regulation
of synapse maturation" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR000742 InterPro:IPR027158
PROSITE:PS50026 SMART:SM00181 InterPro:IPR000152 GO:GO:0016021
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 InterPro:IPR001791 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 Pfam:PF02210 InterPro:IPR003585 SMART:SM00294
PANTHER:PTHR10127:SF309 EMBL:AC007462 EMBL:AC007682 EMBL:AC009234
EMBL:AC068725 EMBL:AC069550 EMBL:AC078994 EMBL:AC068715
HGNC:HGNC:8008 ChiTaRS:NRXN1 EMBL:AC007560 IPI:IPI00893903
ProteinModelPortal:E7ERL8 SMR:E7ERL8 Ensembl:ENST00000401669
ArrayExpress:E7ERL8 Bgee:E7ERL8 Uniprot:E7ERL8
Length = 1507
Score = 204 (76.9 bits), Expect = 3.1e-12, Sum P(2) = 3.1e-12
Identities = 84/322 (26%), Positives = 138/322 (42%)
Query: 92 SSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFD 151
SSY+ L + Y S+ L FK +G++LYN DG DFI + L Y+ + FD
Sbjct: 913 SSYVALATL-QAYTSM-HLFFQFKTTSLDGLILYNS--GDG-NDFIVVELVKGYLHYVFD 967
Query: 152 LGTGAATLR-SSN-PISLGEWHKLRLTRTGRHAY-LQVDRFPSSQILSPGPFTQXXXXXX 208
LG GA ++ SSN P++ +WH + ++R + + +++D ++QI +
Sbjct: 968 LGNGANLIKGSSNKPLNDNQWHNVMISRDTSNLHTVKIDTKITTQITAGA--RNLDLKSD 1025
Query: 209 XXXGGVPDYNIVS-PK-VKIKSSFIGCIQKVLINNHELNILGEAI--QGVNVVNCAHP-- 262
GGV S PK V K F GC+ V +N +++ +A+ G C P
Sbjct: 1026 LYIGGVAKETYKSLPKLVHAKEGFQGCLASVDLNGRLPDLISDALFCNGQIERGCEGPST 1085
Query: 263 -CITQPCGS-GSCVPLYDGYKCVCTQSCKESHLTEVMCASFDHGASFLHYLDPEIIHSSG 320
C C + G C+ +DG+ C C+ + L C D G +++ G
Sbjct: 1086 TCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPL----CN--DPGTTYI------FSKGGG 1133
Query: 321 LLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSK-DFLALGIHNGYAHVMY 379
+ YK+ + D T + + + T +++ SS D+L L IH G V +
Sbjct: 1134 QITYKWPPN-DRPSTRAD-RLAIGFSTVQKEAVLVRVDSSSGLGDYLELHIHQGKIGVKF 1191
Query: 380 XXXXXXXXXXXXQTKINNGVWH 401
IN+G +H
Sbjct: 1192 NVGTDDIAIEESNAIINDGKYH 1213
Score = 146 (56.5 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 43/159 (27%), Positives = 76/159 (47%)
Query: 36 KGRSKECLEDKCNKTPCEHGGKCITTPGSSYCLCPL-GFTGDLCQTRLDLQVPQFNGSSY 94
+G S C ED C+ G C+ C C + F+G LC + G
Sbjct: 1081 EGPSTTCQEDSCSNQ-----GVCLQQWDGFSCDCSMTSFSGPLCNDPGTTYIFS-KGGGQ 1134
Query: 95 LRYQGL-GEQYLSLLD-LTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDL 152
+ Y+ ++ + D L I F ++ +L+ + G+GD++ L+++ + F++
Sbjct: 1135 ITYKWPPNDRPSTRADRLAIGFSTVQKEAVLV-RVDSSSGLGDYLELHIHQGKIGVKFNV 1193
Query: 153 GTGAATLRSSNPI-SLGEWHKLRLTRTGRHAYLQVDRFP 190
GT + SN I + G++H +R TR+G +A LQVD +P
Sbjct: 1194 GTDDIAIEESNAIINDGKYHVVRFTRSGGNATLQVDSWP 1232
Score = 134 (52.2 bits), Expect = 5.2e-11, Sum P(4) = 5.2e-11
Identities = 44/173 (25%), Positives = 80/173 (46%)
Query: 86 VPQFNGSSYLRYQGLGEQYLSLLD-LTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDR 144
+ F GS Y Y S D +T+ FK ++ NG++L+ G AD ++ L L +
Sbjct: 283 IATFKGSEYFCYDLSQNPIQSSSDEITLSFKTLQRNGLMLHTGKSAD----YVNLALKNG 338
Query: 145 YVDFTFDLGTGA--ATLRSSN-PISLGEWHKLRLTRTGR------HAY--LQVDRFPSSQ 193
V +LG+GA A + N + WH +++TR R HA + VD ++
Sbjct: 339 AVSLVINLGSGAFEALVEPVNGKFNDNAWHDVKVTRNLRQHSGIGHAMVTISVDGILTTT 398
Query: 194 ILSPGPFTQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNI 246
+ +T GG P + P + ++F+GC+++V+ N+++ +
Sbjct: 399 GYTQEDYTMLGSDDFFYVGGSPSTADL-PGSPVSNNFMGCLKEVVYKNNDVRL 450
Score = 132 (51.5 bits), Expect = 8.6e-11, Sum P(4) = 8.6e-11
Identities = 62/279 (22%), Positives = 116/279 (41%)
Query: 114 FKAIEPNGILLYN-G---HRADGVG------DFIALYLNDRYVDFTFDLGTGAATLRSS- 162
F+ EPNG++L++ G H+ D DF A+ + D ++ D+G+G +++
Sbjct: 508 FRTTEPNGLILFSHGKPRHQKDAKHPQMIKVDFFAIEMLDGHLYLLLDMGSGTIKIKALL 567
Query: 163 NPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYN--IV 220
++ GEW+ + R GR + V+ + +PG GG+P+ +V
Sbjct: 568 KKVNDGEWYHVDFQRDGRSGTISVNTL-RTPYTAPGESEILDLDDELYLGGLPENKAGLV 626
Query: 221 SPK----VKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNCAHPCITQPCGSGSCVPL 276
P + ++GCI+ + I+ +I Q V + A + C + P
Sbjct: 627 FPTEVWTALLNYGYVGCIRDLFIDGQSKDIR----QMAEVQSTAG--VKPSCSKETAKPC 680
Query: 277 YDGYKCVCTQSCKESHLTEVM-CASFDH-GASFLHYLDPEIIHSSGLLHYKFQLHVDFRI 334
C C++ V C+ + G S + ++ G + K QL V
Sbjct: 681 LSN-PCKNNGMCRDGWNRYVCDCSGTGYLGRSCER--EATVLSYDGSMFMKIQLPVVMH- 736
Query: 335 TGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNG 373
T E ++ +R ++ + G+++ T S S D L L + G
Sbjct: 737 TEAE-DVSLRFRSQRAYGILMATTSRDSADTLRLELDAG 774
Score = 119 (46.9 bits), Expect = 6.8e-09, Sum P(3) = 6.8e-09
Identities = 52/212 (24%), Positives = 88/212 (41%)
Query: 39 SKECLEDKCNKTPCEHGGKCITTPGSSYCLCP-LGFTGDLCQTRLDLQVPQFNGSSYLRY 97
SKE + C PC++ G C C C G+ G C+ + V ++GS +++
Sbjct: 673 SKETAKP-CLSNPCKNNGMCRDGWNRYVCDCSGTGYLGRSCER--EATVLSYDGSMFMKI 729
Query: 98 QGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDL----- 152
Q + D+++ F++ GIL+ R D D + L L+ V T +L
Sbjct: 730 QLPVVMHTEAEDVSLRFRSQRAYGILMATTSR-DSA-DTLRLELDAGRVKLTVNLDCIRI 787
Query: 153 ----GTGAATLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXX 208
G TL + ++ EWH +R+ R G+ L VD + G T+
Sbjct: 788 NCNSSKGPETLFAGYNLNDNEWHTVRVVRRGKSLKLTVDDQQAMTGQMAGDHTRLEFHNI 847
Query: 209 XXXGGVPDYNIVSPKVKIKSSFIGCIQKVLIN 240
G + + +S + S+FIG +Q + N
Sbjct: 848 ET-GIITERRYLS---SVPSNFIGHLQSLTFN 875
Score = 91 (37.1 bits), Expect = 6.2e-06, Sum P(3) = 6.2e-06
Identities = 42/198 (21%), Positives = 77/198 (38%)
Query: 56 GKCITTPGSSYCLC-PLGFTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQYLSLLDLTIVF 114
G + G + LC L G + L+ P G + R+ S +++
Sbjct: 2 GTALLQRGGCFLLCLSLLLLGCWAELGSGLEFPGAEGQ-WTRFPKWNACCES--EMSFQL 58
Query: 115 KAIEPNGILLYNGHRADGVGDFIALYLN-DRYVDFTFDLGTGA-ATLRSSNPISLGEWHK 172
K G++LY +G DF+ L L + +F + ATL + P++ G WH
Sbjct: 59 KTRSARGLVLYFDD--EGFCDFLELILTRGGRLQLSFSIFCAEPATLLADTPVNDGAWHS 116
Query: 173 LRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPD------YNIVSPKVKI 226
+R+ R R+ L +D+ + + GG+P + V+
Sbjct: 117 VRIRRQFRNTTLFIDQVEAKWVEVKSKRRDMTVFSGLFVGGLPPELRAAALKLTLASVRE 176
Query: 227 KSSFIGCIQKVLINNHEL 244
+ F G I+ V +N+ ++
Sbjct: 177 REPFKGWIRDVRVNSSQV 194
Score = 84 (34.6 bits), Expect = 5.2e-11, Sum P(4) = 5.2e-11
Identities = 18/66 (27%), Positives = 31/66 (46%)
Query: 344 RIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTK-INNGVWHR 402
+ KT+S GLIL+ S DF+ + + GY H ++ K +N+ WH
Sbjct: 932 QFKTTSLDGLILYN-SGDGNDFIVVELVKGYLHYVFDLGNGANLIKGSSNKPLNDNQWHN 990
Query: 403 LTVHRN 408
+ + R+
Sbjct: 991 VMISRD 996
Score = 73 (30.8 bits), Expect = 3.8e-05, Sum P(3) = 3.8e-05
Identities = 20/70 (28%), Positives = 31/70 (44%)
Query: 341 IDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQT--KINNG 398
I + KT +GL+L TG +S D++ L + NG ++ K N+
Sbjct: 308 ITLSFKTLQRNGLMLHTG--KSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDN 365
Query: 399 VWHRLTVHRN 408
WH + V RN
Sbjct: 366 AWHDVKVTRN 375
Score = 68 (29.0 bits), Expect = 3.8e-05, Sum P(3) = 3.8e-05
Identities = 16/51 (31%), Positives = 26/51 (50%)
Query: 462 FEQLNTDSGLYVGGVEDIEELTRSKYHHSFKGWISNLILSNDYQVKLPLSR 512
+ L +D YVGG +L S ++F G + ++ N+ V+L LSR
Sbjct: 405 YTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGCLKEVVYKNN-DVRLELSR 454
Score = 65 (27.9 bits), Expect = 5.2e-11, Sum P(4) = 5.2e-11
Identities = 25/88 (28%), Positives = 38/88 (43%)
Query: 446 IRIDTDYSMQSISGGKFEQLNTDSGLYVGGVEDIEELTRSKYHHSFKGWISNLILSNDYQ 505
++IDT + Q +G + L+ S LY+GGV + K H+ +G+ + S D
Sbjct: 1003 VKIDTKITTQITAGAR--NLDLKSDLYIGGVAKETYKSLPKLVHAKEGF-QGCLASVDLN 1059
Query: 506 VKLPLSRSQGSSCQLTCETLNTG-QVTC 532
+LP S C E G TC
Sbjct: 1060 GRLPDLISDALFCNGQIERGCEGPSTTC 1087
Score = 51 (23.0 bits), Expect = 9.1e-08, Sum P(4) = 9.1e-08
Identities = 9/45 (20%), Positives = 21/45 (46%)
Query: 364 DFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGVWHRLTVHRN 408
DF A+ + +G+ +++ K+N+G W+ + R+
Sbjct: 539 DFFAIEMLDGHLYLLLDMGSGTIKIKALLKKVNDGEWYHVDFQRD 583
Score = 47 (21.6 bits), Expect = 3.1e-12, Sum P(2) = 3.1e-12
Identities = 14/54 (25%), Positives = 21/54 (38%)
Query: 27 IQLNDGNKIKGRSKEC-LEDKCNKTPCEHGGKCITTPGSSYCLCP-LGFTGDLC 78
++L+D G C ++ C +GG C + C C GF G C
Sbjct: 202 VKLDDEPPNSGGGSPCEAGEEGEGGVCLNGGVCSVVDDQAVCDCSRTGFRGKDC 255
Score = 47 (21.6 bits), Expect = 5.4e-05, Sum P(3) = 5.4e-05
Identities = 15/51 (29%), Positives = 27/51 (52%)
Query: 428 EFKCLSIQRLHRTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVED 478
E+ + QR R+G + + T Y+ + G+ E L+ D LY+GG+ +
Sbjct: 574 EWYHVDFQRDGRSGTISVNTLRTPYT----APGESEILDLDDELYLGGLPE 620
Score = 41 (19.5 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 8/28 (28%), Positives = 16/28 (57%)
Query: 11 DDWNTVRVFRHRWDAWIQLNDGNKIKGR 38
++W+TVRV R + ++D + G+
Sbjct: 807 NEWHTVRVVRRGKSLKLTVDDQQAMTGQ 834
>MGI|MGI:1096391 [details] [associations]
symbol:Nrxn1 "neurexin I" species:10090 "Mus musculus"
[GO:0001525 "angiogenesis" evidence=IEA] [GO:0005102 "receptor
binding" evidence=ISO] [GO:0005246 "calcium channel regulator
activity" evidence=IGI] [GO:0005509 "calcium ion binding"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005623 "cell" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=IC;ISO] [GO:0007155 "cell adhesion" evidence=IEA]
[GO:0007157 "heterophilic cell-cell adhesion" evidence=IDA]
[GO:0007158 "neuron cell-cell adhesion" evidence=IDA] [GO:0007268
"synaptic transmission" evidence=IGI] [GO:0007269 "neurotransmitter
secretion" evidence=IGI;TAS] [GO:0007416 "synapse assembly"
evidence=IGI] [GO:0007612 "learning" evidence=IMP] [GO:0009986
"cell surface" evidence=ISO;IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016339 "calcium-dependent cell-cell adhesion" evidence=IDA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0030139 "endocytic
vesicle" evidence=ISO] [GO:0030534 "adult behavior" evidence=IMP]
[GO:0033130 "acetylcholine receptor binding" evidence=IDA]
[GO:0035176 "social behavior" evidence=ISO] [GO:0035418 "protein
localization to synapse" evidence=IDA] [GO:0042734 "presynaptic
membrane" evidence=IDA] [GO:0043473 "pigmentation" evidence=ISO]
[GO:0043499 "eukaryotic cell surface binding" evidence=IDA]
[GO:0044295 "axonal growth cone" evidence=IDA] [GO:0045184
"establishment of protein localization" evidence=IDA] [GO:0045202
"synapse" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0048306 "calcium-dependent protein binding"
evidence=IDA] [GO:0050839 "cell adhesion molecule binding"
evidence=ISO;IPI] [GO:0050885 "neuromuscular process controlling
balance" evidence=IMP] [GO:0051290 "protein heterotetramerization"
evidence=ISO] [GO:0051490 "negative regulation of filopodium
assembly" evidence=IDA] [GO:0051965 "positive regulation of synapse
assembly" evidence=IGI] [GO:0051968 "positive regulation of
synaptic transmission, glutamatergic" evidence=IDA;IMP] [GO:0060076
"excitatory synapse" evidence=IC] [GO:0060077 "inhibitory synapse"
evidence=IC] [GO:0060134 "prepulse inhibition" evidence=IMP]
[GO:0060325 "face morphogenesis" evidence=ISO] [GO:0071625
"vocalization behavior" evidence=ISO] [GO:0090004 "positive
regulation of establishment of protein localization to plasma
membrane" evidence=IDA] [GO:0090129 "positive regulation of synapse
maturation" evidence=IDA] [GO:0097091 "synaptic vesicle clustering"
evidence=IDA] [GO:0097104 "postsynaptic membrane assembly"
evidence=IDA] [GO:0097105 "presynaptic membrane assembly"
evidence=IDA] [GO:0097109 "neuroligin family protein binding"
evidence=ISO;IPI] [GO:0097112 "gamma-aminobutyric acid receptor
clustering" evidence=IDA] [GO:0097114 "N-methyl-D-aspartate
receptor clustering" evidence=IDA] [GO:0097116 "gephyrin
clustering" evidence=IDA] [GO:0097117 "guanylate kinase-associated
protein clustering" evidence=IDA] [GO:0097118 "neuroligin
clustering" evidence=IDA] [GO:0097119 "postsynaptic density protein
95 clustering" evidence=IDA] [GO:0097120 "receptor localization to
synapse" evidence=IDA] [GO:2000310 "regulation of
N-methyl-D-aspartate selective glutamate receptor activity"
evidence=IDA] [GO:2000311 "regulation of
alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IDA] [GO:2000463 "positive
regulation of excitatory postsynaptic membrane potential"
evidence=IDA;IMP] [GO:2000821 "regulation of grooming behavior"
evidence=IMP] InterPro:IPR000742 InterPro:IPR027158 PROSITE:PS50026
SMART:SM00181 InterPro:IPR000152 MGI:MGI:1096391 GO:GO:0016021
GO:GO:0005886 GO:GO:0009986 GO:GO:0046872 GO:GO:0030054
GO:GO:0007612 GO:GO:0050885 GO:GO:0007155 GO:GO:0042734
GO:GO:0051968 GO:GO:0060134 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 GO:GO:0030534 GO:GO:0051965 InterPro:IPR001791
SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025 GO:GO:0090129
GO:GO:0007269 GO:GO:0005246 Pfam:PF02210 InterPro:IPR003585
SMART:SM00294 GO:GO:2000463 GO:GO:2000821 GO:GO:0097119
GO:GO:0097104 GO:GO:0097116 eggNOG:NOG302266
GeneTree:ENSGT00560000076996 HOGENOM:HOG000230481
HOVERGEN:HBG052670 KO:K07377 OMA:NAYACEC OrthoDB:EOG41G339
PANTHER:PTHR10127:SF309 CTD:9378 ChiTaRS:NRXN1 GO:GO:0097118
EMBL:AB093249 EMBL:AC101872 EMBL:AC131326 EMBL:AC151286
EMBL:AC154325 EMBL:AC154599 EMBL:AC167814 EMBL:AC170901
EMBL:AC171209 EMBL:CT025708 EMBL:CT486002 EMBL:BC047146
EMBL:AF387674 EMBL:AK017578 EMBL:AJ006802 IPI:IPI00230050
IPI:IPI00230051 IPI:IPI00468539 IPI:IPI00970455 RefSeq:NP_064648.3
RefSeq:NP_796258.2 UniGene:Mm.312068 PDB:3BOD PDB:3MW2 PDBsum:3BOD
PDBsum:3MW2 ProteinModelPortal:Q9CS84 SMR:Q9CS84 IntAct:Q9CS84
STRING:Q9CS84 PhosphoSite:Q9CS84 PaxDb:Q9CS84 PRIDE:Q9CS84
Ensembl:ENSMUST00000054059 Ensembl:ENSMUST00000160844
Ensembl:ENSMUST00000161402 Ensembl:ENSMUST00000174331 GeneID:18189
KEGG:mmu:18189 UCSC:uc008dvz.2 UCSC:uc008dwa.2 UCSC:uc012ayq.1
InParanoid:Q9CS84 EvolutionaryTrace:Q9CS84 NextBio:293528
Bgee:Q9CS84 CleanEx:MM_NRXN1 Genevestigator:Q9CS84
GermOnline:ENSMUSG00000024109 GO:GO:0033130 Uniprot:Q9CS84
Length = 1514
Score = 204 (76.9 bits), Expect = 3.1e-12, Sum P(2) = 3.1e-12
Identities = 84/322 (26%), Positives = 138/322 (42%)
Query: 92 SSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFD 151
SSY+ L + Y S+ L FK +G++LYN DG DFI + L Y+ + FD
Sbjct: 920 SSYVALATL-QAYTSM-HLFFQFKTTSLDGLILYNS--GDG-NDFIVVELVKGYLHYVFD 974
Query: 152 LGTGAATLR-SSN-PISLGEWHKLRLTRTGRHAY-LQVDRFPSSQILSPGPFTQXXXXXX 208
LG GA ++ SSN P++ +WH + ++R + + +++D ++QI +
Sbjct: 975 LGNGANLIKGSSNKPLNDNQWHNVMISRDTSNLHTVKIDTKITTQITAGA--RNLDLKSD 1032
Query: 209 XXXGGVPDYNIVS-PK-VKIKSSFIGCIQKVLINNHELNILGEAI--QGVNVVNCAHP-- 262
GGV S PK V K F GC+ V +N +++ +A+ G C P
Sbjct: 1033 LYIGGVAKETYKSLPKLVHAKEGFQGCLASVDLNGRLPDLISDALFCNGQIERGCEGPST 1092
Query: 263 -CITQPCGS-GSCVPLYDGYKCVCTQSCKESHLTEVMCASFDHGASFLHYLDPEIIHSSG 320
C C + G C+ +DG+ C C+ + L C D G +++ G
Sbjct: 1093 TCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPL----CN--DPGTTYI------FSKGGG 1140
Query: 321 LLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSK-DFLALGIHNGYAHVMY 379
+ YK+ + D T + + + T +++ SS D+L L IH G V +
Sbjct: 1141 QITYKWPPN-DRPSTRAD-RLAIGFSTVQKEAVLVRVDSSSGLGDYLELHIHQGKIGVKF 1198
Query: 380 XXXXXXXXXXXXQTKINNGVWH 401
IN+G +H
Sbjct: 1199 NVGTDDIAIEESNAIINDGKYH 1220
Score = 146 (56.5 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 43/159 (27%), Positives = 76/159 (47%)
Query: 36 KGRSKECLEDKCNKTPCEHGGKCITTPGSSYCLCPL-GFTGDLCQTRLDLQVPQFNGSSY 94
+G S C ED C+ G C+ C C + F+G LC + G
Sbjct: 1088 EGPSTTCQEDSCSNQ-----GVCLQQWDGFSCDCSMTSFSGPLCNDPGTTYIFS-KGGGQ 1141
Query: 95 LRYQGL-GEQYLSLLD-LTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDL 152
+ Y+ ++ + D L I F ++ +L+ + G+GD++ L+++ + F++
Sbjct: 1142 ITYKWPPNDRPSTRADRLAIGFSTVQKEAVLV-RVDSSSGLGDYLELHIHQGKIGVKFNV 1200
Query: 153 GTGAATLRSSNPI-SLGEWHKLRLTRTGRHAYLQVDRFP 190
GT + SN I + G++H +R TR+G +A LQVD +P
Sbjct: 1201 GTDDIAIEESNAIINDGKYHVVRFTRSGGNATLQVDSWP 1239
Score = 133 (51.9 bits), Expect = 6.8e-11, Sum P(4) = 6.8e-11
Identities = 61/279 (21%), Positives = 116/279 (41%)
Query: 114 FKAIEPNGILLYN-G---HRADGVG------DFIALYLNDRYVDFTFDLGTGAATLRS-S 162
F+ EPNG++L++ G H+ D DF A+ + D ++ D+G+G +++
Sbjct: 515 FRTTEPNGLILFSHGKPRHQKDAKHPQMIKVDFFAIEMLDGHLYLLLDMGSGTIKIKALQ 574
Query: 163 NPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYN--IV 220
++ GEW+ + R GR + V+ + +PG GG+P+ +V
Sbjct: 575 KKVNDGEWYHVDFQRDGRSGTISVNTL-RTPYTAPGESEILDLDDELYLGGLPENKAGLV 633
Query: 221 SPK----VKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNCAHPCITQPCGSGSCVPL 276
P + ++GCI+ + I+ +I Q + + A + C + P
Sbjct: 634 FPTEVWTALLNYGYVGCIRDLFIDGQSKDIR----QMAEIQSTAG--VKPSCSKETAKPC 687
Query: 277 YDGYKCVCTQSCKESHLTEVM-CASFDH-GASFLHYLDPEIIHSSGLLHYKFQLHVDFRI 334
C C++ V C+ + G S + ++ G + K QL V
Sbjct: 688 LSN-PCKNNGMCRDGWNRYVCDCSGTGYLGRSCER--EATVLSYDGSMFMKIQLPVVMH- 743
Query: 335 TGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNG 373
T E ++ +R ++ + G+++ T S S D L L + G
Sbjct: 744 TEAE-DVSLRFRSQRAYGILMATTSRDSADTLRLELDAG 781
Score = 126 (49.4 bits), Expect = 0.00045, P = 0.00045
Identities = 94/429 (21%), Positives = 162/429 (37%)
Query: 109 DLTIVFKAIEPNGILLYNGHRADGVGDFIALYLN-DRYVDFTFDLGTGA-ATLRSSNPIS 166
+++ K G++LY +G DF+ L L + +F + ATL + P++
Sbjct: 53 EMSFQLKTRSARGLVLYFDD--EGFCDFLELILTRGGRLQLSFSIFCAEPATLLADTPVN 110
Query: 167 LGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPD------YNIV 220
G WH +R+ R R+ L +DR + + GG+P +
Sbjct: 111 DGAWHSVRIRRQFRNTTLYIDRAEAKWVEVKSKRRDMTVFSGLFVGGLPPELRAAALKLT 170
Query: 221 SPKVKIKSSFIGCIQKVLINNHE-LNILGEAIQ-GVNVVNCA--HPCITQPCGSGSCVPL 276
V+ + F G I+ V +N+ + L + G ++ N PC G G V L
Sbjct: 171 LASVREREPFKGWIRDVRVNSSQALPVDGGEVKLDDEPPNSGGGSPCEAGEEGEGG-VCL 229
Query: 277 YDGY------KCVCTQSCKESHLTEVMCASFDHGASFLHYLDPEIIHSSGLLHYKFQLHV 330
G + VC C + C+ D+ L +L ++ G K +
Sbjct: 230 NGGVCSVVDDQAVC--DCSRTGFRGKDCSQEDNNVEGLAHL---MMGDQGKSKGKEEYIA 284
Query: 331 DFRITGYEFNIDM-RIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXX 389
F+ + Y F D+ + SSS I + + ++ L L H G + Y
Sbjct: 285 TFKGSEY-FCYDLSQNPIQSSSDEITLSFKTLQRNGLML--HTGKS-ADYVNLALKNGAV 340
Query: 390 XXQTKINNGVWHRLT--VHRNFMV-VMHGSSHTRS-NKSSKIEFKCLSIQRLHRTGKQCL 445
+ +G + L V+ F H TR+ + S I + +LH C
Sbjct: 341 SLVINLGSGAFEALVEPVNGKFNDNAWHDVKVTRNLRQHSGIGHAM--VNKLH-----CS 393
Query: 446 IRIDTD--YSMQSISGGKFEQLNTDSGLYVGGVEDIEELTRSKYHHSFKGWISNLILSND 503
+ I D + + + L +D YVGG +L S ++F G + ++ N+
Sbjct: 394 VTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGCLKEVVYKNN 453
Query: 504 YQVKLPLSR 512
V+L LSR
Sbjct: 454 -DVRLELSR 461
Score = 120 (47.3 bits), Expect = 5.4e-09, Sum P(3) = 5.4e-09
Identities = 57/226 (25%), Positives = 93/226 (41%)
Query: 25 AWIQLNDGNKIKGRSKECLEDKCNKTPCEHGGKCITTPGSSYCLCP-LGFTGDLCQTRLD 83
A IQ G K SKE + C PC++ G C C C G+ G C+ +
Sbjct: 667 AEIQSTAGVK-PSCSKETAKP-CLSNPCKNNGMCRDGWNRYVCDCSGTGYLGRSCER--E 722
Query: 84 LQVPQFNGSSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLND 143
V ++GS +++ Q + D+++ F++ GIL+ R D D + L L+
Sbjct: 723 ATVLSYDGSMFMKIQLPVVMHTEAEDVSLRFRSQRAYGILMATTSR-DSA-DTLRLELDA 780
Query: 144 RYVDFTFDL---------GTGAATLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQI 194
V T +L G TL + ++ EWH +R+ R G+ L VD +
Sbjct: 781 GRVKLTVNLDCIRINCNSSKGPETLFAGYNLNDNEWHTVRVVRRGKSLKLTVDDQQAMTG 840
Query: 195 LSPGPFTQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLIN 240
G T+ G + + +S + S+FIG +Q + N
Sbjct: 841 QMAGDHTRLEFHNIET-GIITERRYLS---SVPSNFIGHLQSLTFN 882
Score = 84 (34.6 bits), Expect = 6.8e-11, Sum P(4) = 6.8e-11
Identities = 18/66 (27%), Positives = 31/66 (46%)
Query: 344 RIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTK-INNGVWHR 402
+ KT+S GLIL+ S DF+ + + GY H ++ K +N+ WH
Sbjct: 939 QFKTTSLDGLILYN-SGDGNDFIVVELVKGYLHYVFDLGNGANLIKGSSNKPLNDNQWHN 997
Query: 403 LTVHRN 408
+ + R+
Sbjct: 998 VMISRD 1003
Score = 65 (27.9 bits), Expect = 6.8e-11, Sum P(4) = 6.8e-11
Identities = 25/88 (28%), Positives = 38/88 (43%)
Query: 446 IRIDTDYSMQSISGGKFEQLNTDSGLYVGGVEDIEELTRSKYHHSFKGWISNLILSNDYQ 505
++IDT + Q +G + L+ S LY+GGV + K H+ +G+ + S D
Sbjct: 1010 VKIDTKITTQITAGAR--NLDLKSDLYIGGVAKETYKSLPKLVHAKEGF-QGCLASVDLN 1066
Query: 506 VKLPLSRSQGSSCQLTCETLNTG-QVTC 532
+LP S C E G TC
Sbjct: 1067 GRLPDLISDALFCNGQIERGCEGPSTTC 1094
Score = 47 (21.6 bits), Expect = 3.1e-12, Sum P(2) = 3.1e-12
Identities = 14/54 (25%), Positives = 21/54 (38%)
Query: 27 IQLNDGNKIKGRSKEC-LEDKCNKTPCEHGGKCITTPGSSYCLCP-LGFTGDLC 78
++L+D G C ++ C +GG C + C C GF G C
Sbjct: 202 VKLDDEPPNSGGGSPCEAGEEGEGGVCLNGGVCSVVDDQAVCDCSRTGFRGKDC 255
Score = 41 (19.5 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 8/28 (28%), Positives = 16/28 (57%)
Query: 11 DDWNTVRVFRHRWDAWIQLNDGNKIKGR 38
++W+TVRV R + ++D + G+
Sbjct: 814 NEWHTVRVVRRGKSLKLTVDDQQAMTGQ 841
>UNIPROTKB|P78357 [details] [associations]
symbol:CNTNAP1 "Contactin-associated protein 1"
species:9606 "Homo sapiens" [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0017124 "SH3 domain binding" evidence=IEA]
[GO:0050884 "neuromuscular process controlling posture"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0005070 "SH3/SH2 adaptor activity"
evidence=TAS] [GO:0005887 "integral to plasma membrane"
evidence=TAS] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0004872 "receptor activity" evidence=TAS] [GO:0007411 "axon
guidance" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008076 "voltage-gated potassium channel complex" evidence=ISS]
[GO:0008088 "axon cargo transport" evidence=ISS] [GO:0048812
"neuron projection morphogenesis" evidence=ISS] [GO:0007010
"cytoskeleton organization" evidence=ISS] [GO:0033270 "paranode
region of axon" evidence=ISS] [GO:0030913 "paranodal junction
assembly" evidence=ISS] [GO:0002175 "protein localization to
paranode region of axon" evidence=ISS] InterPro:IPR000421
InterPro:IPR000742 Pfam:PF00754 PROSITE:PS01285 PROSITE:PS01286
PROSITE:PS50022 PROSITE:PS50026 SMART:SM00181 SMART:SM00231
INTERPRO:IPR002181 Reactome:REACT_111045 GO:GO:0007411
GO:GO:0007165 GO:GO:0007010 GO:GO:0005887 GO:GO:0005070
GO:GO:0008088 GO:GO:0050885 GO:GO:0007155 GO:GO:0004872
GO:GO:0008076 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 InterPro:IPR008979 SUPFAM:SSF49785
InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025 Gene3D:3.90.215.10
InterPro:IPR014716 SMART:SM00186 SUPFAM:SSF56496 PROSITE:PS00514
PROSITE:PS51406 GO:GO:0033270 Pfam:PF02210 InterPro:IPR003585
SMART:SM00294 GO:GO:0030913 GO:GO:0002175 GO:GO:0050884
HOVERGEN:HBG057718 EMBL:U87223 IPI:IPI00219249 RefSeq:NP_003623.1
UniGene:Hs.408730 ProteinModelPortal:P78357 SMR:P78357
IntAct:P78357 STRING:P78357 PhosphoSite:P78357 DMDM:17433016
PaxDb:P78357 PRIDE:P78357 DNASU:8506 Ensembl:ENST00000264638
GeneID:8506 KEGG:hsa:8506 UCSC:uc002iay.3 CTD:8506
GeneCards:GC17P040835 HGNC:HGNC:8011 HPA:HPA011772 MIM:602346
neXtProt:NX_P78357 PharmGKB:PA26691 eggNOG:NOG291100
HOGENOM:HOG000230964 InParanoid:P78357 KO:K07379 OMA:RHDLHYH
OrthoDB:EOG40GCQ0 PhylomeDB:P78357 ChiTaRS:CNTNAP1 GenomeRNAi:8506
NextBio:31835 Bgee:P78357 CleanEx:HS_CNTNAP1 Genevestigator:P78357
GermOnline:ENSG00000108797 Uniprot:P78357
Length = 1384
Score = 165 (63.1 bits), Expect = 3.2e-12, Sum P(2) = 3.2e-12
Identities = 67/237 (28%), Positives = 103/237 (43%)
Query: 60 TTPGSSYCLCPLGFTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQYLSLLDLTIVFKAIEP 119
+T + + L PL GD R F+ + LR+ + + LD++ F+ P
Sbjct: 765 STSEAQFFLRPLRCYGD----RNSWNTISFHTGAALRFPPIRANHS--LDVSFYFRTSAP 818
Query: 120 NGILLYN--GHRADGVGDFIALYLN-DRYVDFTFDLGTGAATLR-SSNPISLG--EWHKL 173
+G+ L N G ++ + LN R V F FD+G G L S+ EWH +
Sbjct: 819 SGVFLENMGGPYCQWRRPYVRVELNTSRDVVFAFDVGNGDENLTVHSDDFEFNDDEWHLV 878
Query: 174 RLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGC 233
R + A L+VD P +L P P P Y + S ++K + F+GC
Sbjct: 879 RAEINVKQARLRVDHRP--WVLRPMPLQTYIWMEYDQ----PLY-VGSAELK-RRPFVGC 930
Query: 234 IQKVLINNHELNILGEA--IQGVN---VVNCAHPCITQPC-GSGSCVPLYDGYKCVC 284
++ + +N LN+ G A +G + +CAHP + PC G CV Y Y C C
Sbjct: 931 LRAMRLNGVTLNLEGRANASEGTSPNCTGHCAHPRL--PCFHGGRCVERYSYYTCDC 985
Score = 119 (46.9 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 49/191 (25%), Positives = 83/191 (43%)
Query: 71 LGFTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQYLSLLDL-TIVFKAIEPNGILLYNGHR 129
LG G C + D+ F+G + Y+ SL D+ FK E +G+LL+
Sbjct: 163 LGLYG--CPYKADILY--FDGDDAISYRFPRGVSRSLWDVFAFSFKTEEKDGLLLH---- 214
Query: 130 ADGV-GDFIALYLNDRYVDFTFDLGT-------GAATLRSSNPISLGEWHKLRLTRTGRH 181
A+G GD++ L L ++ LG+ G T+ + ++ WH +R+ R GR
Sbjct: 215 AEGAQGDYVTLELEGAHLLLHMSLGSSPIQPRPGHTTVSAGGVLNDQHWHYVRVDRFGRD 274
Query: 182 AYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINN 241
+D + IL+ G F + GG+ + + +F GCI+ V+ N
Sbjct: 275 VNFTLDGYVQRFILN-GDFERLNLDTEMFIGGL--VGAARKNLAYRHNFRGCIENVIFNR 331
Query: 242 HELNILGEAIQ 252
+NI A++
Sbjct: 332 --VNIADLAVR 340
Score = 116 (45.9 bits), Expect = 6.0e-07, Sum P(2) = 6.0e-07
Identities = 34/138 (24%), Positives = 68/138 (49%)
Query: 109 DLTIVFKAIEPNGILLYNGHRADGVGDFIALYL-NDRYVDFTFDLGTGAATLR-SSNPIS 166
+++ F +LLY + V D++A+ + +D + + LGT + ++ P++
Sbjct: 1083 EVSFSFSTSSAPAVLLYV---SSFVRDYMAVLIKDDGTLQLRYQLGTSPYVYQLTTRPVT 1139
Query: 167 LGEWHKLRLTRTGRHAYLQVDRFP-SSQILSPGPFTQXXXXXXXXXGGVPDYNIVSPKVK 225
G+ H + +TR R+ ++QVD FP + Q S +Q G V + ++ P+++
Sbjct: 1140 DGQPHSINITRVYRNLFIQVDYFPLTEQKFSLLVDSQLDSPKALYLGRVMETGVIDPEIQ 1199
Query: 226 IKSS--FIGCIQKVLINN 241
++ F GC+ V NN
Sbjct: 1200 RYNTPGFSGCLSGVRFNN 1217
Score = 87 (35.7 bits), Expect = 3.2e-12, Sum P(2) = 3.2e-12
Identities = 15/41 (36%), Positives = 22/41 (53%)
Query: 43 LEDKCNKTPCEHGGKCITTPGSSYCLCPL-GFTGDLCQTRL 82
+ D+C+ CEH G+C + C C L G+ G+ C T L
Sbjct: 540 ITDRCSPNMCEHDGRCYQSWDDFICYCELTGYKGETCHTPL 580
Score = 69 (29.3 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 16/48 (33%), Positives = 21/48 (43%)
Query: 33 NKIKGRSKECLEDKCN-KTPCEHGGKCITTPGSSYCLCPL-GFTGDLC 78
N +G S C + + PC HGG+C+ C C L F G C
Sbjct: 948 NASEGTSPNCTGHCAHPRLPCFHGGRCVERYSYYTCDCDLTAFDGPYC 995
Score = 56 (24.8 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 12/63 (19%), Positives = 25/63 (39%)
Query: 341 IDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGVW 400
+ R +T +GL+L++ + L + G +V ++N+G W
Sbjct: 385 VSFRFRTWDLTGLLLFSRLGDGLGHVELTLSEGQVNVSIAQSGRKKLQFAAGYRLNDGFW 444
Query: 401 HRL 403
H +
Sbjct: 445 HEV 447
>UNIPROTKB|F1S8Z0 [details] [associations]
symbol:SLIT1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050919 "negative chemotaxis" evidence=IEA] [GO:0048846
"axon extension involved in axon guidance" evidence=IEA]
[GO:0048495 "Roundabout binding" evidence=IEA] [GO:0040023
"establishment of nucleus localization" evidence=IEA] [GO:0033563
"dorsal/ventral axon guidance" evidence=IEA] [GO:0031290 "retinal
ganglion cell axon guidance" evidence=IEA] [GO:0022028 "tangential
migration from the subventricular zone to the olfactory bulb"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005509 "calcium ion
binding" evidence=IEA] InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 GO:GO:0005737 GO:GO:0005615 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0008045
PROSITE:PS01186 InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274
SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0040023 InterPro:IPR025875
Pfam:PF12799 GO:GO:0031290 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
Pfam:PF12661 GO:GO:0033563 Pfam:PF01463
GeneTree:ENSGT00700000104083 GO:GO:0022028 GO:GO:0050919
OMA:KCVHGKC EMBL:FP340446 ProteinModelPortal:F1S8Z0
Ensembl:ENSSSCT00000011502 Uniprot:F1S8Z0
Length = 1397
Score = 199 (75.1 bits), Expect = 4.9e-12, P = 4.9e-12
Identities = 71/244 (29%), Positives = 108/244 (44%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQYLS 106
C T C++G C+ C C GF G C+ +L L V + +YL++ L Q
Sbjct: 994 CEGTECQNGANCVDQGNRPVCQCLPGFGGPECE-KL-LSVNFVDRDTYLQFTDL--QNWP 1049
Query: 107 LLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGT-GAATLRSSNPI 165
++T+ E NGILLYNG D IA+ L +V ++D G+ ++ + S+ I
Sbjct: 1050 RANITLQVSTAEDNGILLYNGDN-----DHIAVELYQGHVRVSYDPGSYPSSAIYSAETI 1104
Query: 166 SLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVP-DYNIVSPKV 224
+ G++H + L + L +D + + G GG+P D N + ++
Sbjct: 1105 NDGQFHTVELVTFDQMVNLSIDGGSPMTMDNFGKHYTLNSEAPLYVGGMPVDVNSAAFRL 1164
Query: 225 -KIK--SSFIGCIQKVLINNHELNILGEAIQGVNVVNCAHPCITQPCGSGSCVP-LYDGY 280
+I SSF GCI+ + INN EL + VV PC C G C P G
Sbjct: 1165 WQILNGSSFHGCIRNLYINN-ELQDFTKTRMKPGVVPGCEPCRKLYCLHGICQPNATPGP 1223
Query: 281 KCVC 284
C C
Sbjct: 1224 VCHC 1227
Score = 99 (39.9 bits), Expect = 5.1e-08, Sum P(4) = 5.1e-08
Identities = 20/51 (39%), Positives = 24/51 (47%)
Query: 36 KGRSKECLEDKCNKTPCEHGGKCITTPGSSY---CLCPLGFTGDLCQTRLD 83
KGR E D C+ +PC +GG C + G C CP GF G C D
Sbjct: 820 KGRDCEVSLDSCSSSPCGNGGTCHSQQGEDAGFTCSCPTGFEGPTCGENTD 870
Score = 96 (38.9 bits), Expect = 4.6e-06, Sum P(3) = 4.6e-06
Identities = 19/49 (38%), Positives = 26/49 (53%)
Query: 37 GRSKECLEDKCNK--TPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLD 83
GR+ E L D C+ PC++ +C+ TP C C G+TGD C D
Sbjct: 900 GRACEQLVDFCSPDLNPCQNEAQCVGTPDGPRCECAPGYTGDNCSENQD 948
Score = 91 (37.1 bits), Expect = 3.5e-07, Sum P(4) = 3.5e-07
Identities = 21/58 (36%), Positives = 27/58 (46%)
Query: 45 DKCNKTPCEHGGKCITTPGSSY-CLCPLGFTGDLCQTRLDL--QVPQFNGSSYLRYQG 99
D C +PC++ G C P Y C CP G+ G C+ LD P NG + QG
Sbjct: 790 DPCLSSPCQNQGTCRNDPLEVYRCACPSGYKGRDCEVSLDSCSSSPCGNGGTCHSQQG 847
Score = 88 (36.0 bits), Expect = 3.2e-05, Sum P(3) = 3.2e-05
Identities = 13/37 (35%), Positives = 21/37 (56%)
Query: 44 EDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQT 80
+D C C++G +C+ C+C GF+G LC+T
Sbjct: 947 QDDCRDHRCQNGAQCVDEVNGYTCVCAEGFSGQLCET 983
Score = 85 (35.0 bits), Expect = 1.5e-06, Sum P(4) = 1.5e-06
Identities = 15/46 (32%), Positives = 23/46 (50%)
Query: 45 DKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQFN 90
D C + C +GG C+ G+ C CP ++G C+ +D P N
Sbjct: 870 DDCVEHSCANGGICVDGVGNYTCQCPPQYSGRACEQLVDFCSPDLN 915
Score = 76 (31.8 bits), Expect = 5.1e-08, Sum P(4) = 5.1e-08
Identities = 15/62 (24%), Positives = 31/62 (50%)
Query: 340 NIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGV 399
NI +++ T+ +G++L+ G + D +A+ ++ G+ V Y IN+G
Sbjct: 1052 NITLQVSTAEDNGILLYNGDN---DHIAVELYQGHVRVSYDPGSYPSSAIYSAETINDGQ 1108
Query: 400 WH 401
+H
Sbjct: 1109 FH 1110
Score = 68 (29.0 bits), Expect = 5.1e-08, Sum P(4) = 5.1e-08
Identities = 21/65 (32%), Positives = 32/65 (49%)
Query: 446 IRIDTDYSMQSISGGKFEQLNTDSGLYVGGVE-DIEELTRSKYH----HSFKGWISNLIL 500
+ ID M + GK LN+++ LYVGG+ D+ + SF G I NL +
Sbjct: 1123 LSIDGGSPMTMDNFGKHYTLNSEAPLYVGGMPVDVNSAAFRLWQILNGSSFHGCIRNLYI 1182
Query: 501 SNDYQ 505
+N+ Q
Sbjct: 1183 NNELQ 1187
Score = 58 (25.5 bits), Expect = 5.1e-08, Sum P(4) = 5.1e-08
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 249 EAIQGVNVVNCAH---PCITQPCGSGS-CVPLYDGYKCVCTQ 286
E G NC+ C C +G+ CV +GY CVC +
Sbjct: 933 ECAPGYTGDNCSENQDDCRDHRCQNGAQCVDEVNGYTCVCAE 974
Score = 43 (20.2 bits), Expect = 1.5e-06, Sum P(4) = 1.5e-06
Identities = 11/38 (28%), Positives = 14/38 (36%)
Query: 267 PC-GSGSCVPLYDGYKCVCTQSCKESHLTEVMCASFDH 303
PC CV DG +C C + +E DH
Sbjct: 916 PCQNEAQCVGTPDGPRCECAPGYTGDNCSENQDDCRDH 953
>UNIPROTKB|Q9C0A0 [details] [associations]
symbol:CNTNAP4 "Contactin-associated protein-like 4"
species:9606 "Homo sapiens" [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR000421 InterPro:IPR000742 Pfam:PF00754 PROSITE:PS01285
PROSITE:PS01286 PROSITE:PS50022 PROSITE:PS50026 SMART:SM00181
SMART:SM00231 INTERPRO:IPR002181 GO:GO:0016021 GO:GO:0007165
GO:GO:0007155 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 InterPro:IPR008979 SUPFAM:SSF49785
InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025 Gene3D:3.90.215.10
InterPro:IPR014716 SMART:SM00186 SUPFAM:SSF56496 PROSITE:PS00514
PROSITE:PS51406 Pfam:PF02210 HOVERGEN:HBG057718 eggNOG:NOG291100
HOGENOM:HOG000230964 EMBL:AB100093 EMBL:AB051550 EMBL:AC010528
EMBL:AC106741 IPI:IPI00216250 IPI:IPI00644276 RefSeq:NP_207837.2
RefSeq:NP_620481.2 UniGene:Hs.461389 ProteinModelPortal:Q9C0A0
SMR:Q9C0A0 IntAct:Q9C0A0 MINT:MINT-241176 STRING:Q9C0A0
PhosphoSite:Q9C0A0 DMDM:209572753 PaxDb:Q9C0A0 PRIDE:Q9C0A0
DNASU:85445 Ensembl:ENST00000307431 Ensembl:ENST00000478060
GeneID:85445 KEGG:hsa:85445 UCSC:uc002feu.1 CTD:85445
GeneCards:GC16P076311 HGNC:HGNC:18747 HPA:HPA031859 MIM:610518
neXtProt:NX_Q9C0A0 PharmGKB:PA134874662 InParanoid:Q9C0A0
GenomeRNAi:85445 NextBio:76043 ArrayExpress:Q9C0A0 Bgee:Q9C0A0
CleanEx:HS_CNTNAP4 Genevestigator:Q9C0A0 GermOnline:ENSG00000152910
Uniprot:Q9C0A0
Length = 1308
Score = 171 (65.3 bits), Expect = 5.4e-12, Sum P(2) = 5.4e-12
Identities = 79/300 (26%), Positives = 127/300 (42%)
Query: 92 SSYLRYQGL-GEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLND-RYVDFT 149
+SYL + GE LS D++ FK +G+ L N G+ DFI + L V F+
Sbjct: 801 ASYLHFPTFHGE--LSA-DVSFFFKTTASSGVFLENL----GIADFIRIELRSPTVVTFS 853
Query: 150 FDLGTGAATLRSSNPISLGE--WHKLRLTRTGRHAYLQVDRF-PSSQILSPGPFTQXXXX 206
FD+G G + +P + WH +R+ R + A LQVD+ P +Q P P
Sbjct: 854 FDVGNGPFEISVQSPTHFNDNQWHHVRVERNMKEASLQVDQLTPKTQ---PAPADGHVLL 910
Query: 207 XXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVN--CAHPCI 264
+ V + F+GCI+ + +N L+ L E Q V C C
Sbjct: 911 Q------LNSQLFVGGTATRQRGFLGCIRSLQLNGMTLD-LEERAQVTPEVQPGCRGHCS 963
Query: 265 T--QPC-GSGSCVPLYDGYKCVCTQSCKESHL-TEVMCASFDHGASFLHYLDPEIIHSSG 320
+ + C G C G+ C CT S + + A F G+S ++ + S
Sbjct: 964 SYGKLCRNGGKCRERPIGFFCDCTFSAYTGPFCSNEISAYFGSGSSVIYNFQENYLLSKN 1023
Query: 321 LLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGI-HNGYAHVMY 379
+ H D +++ E I +T+ + L+L+ SS K++L++ I NG + Y
Sbjct: 1024 SSSHAASFHGDMKLSR-EM-IKFSFRTTRTPSLLLFV-SSFYKEYLSVIIAKNGSLQIRY 1080
Score = 78 (32.5 bits), Expect = 5.4e-12, Sum P(2) = 5.4e-12
Identities = 23/90 (25%), Positives = 41/90 (45%)
Query: 43 LEDKCNKTPCEHGGKCITTPGSSYCLCP-LGFTGDLCQTRL---DLQVPQFNGSS----Y 94
+ D+C CEHGG+C + + +C C G+ G C + + + G++ Y
Sbjct: 549 ISDRCLPNYCEHGGECSQSWSTFHCNCTNTGYRGATCHNSIYEQSCEAYKHRGNTSGFYY 608
Query: 95 LRYQGLG--EQYLSLLDLT-IVFKAIEPNG 121
+ G G E +L ++T + I+ NG
Sbjct: 609 IDSDGSGPLEPFLLYCNMTETAWTIIQHNG 638
>UNIPROTKB|E9PDN6 [details] [associations]
symbol:CNTNAP4 "Contactin-associated protein-like 4"
species:9606 "Homo sapiens" [GO:0007155 "cell adhesion"
evidence=IEA] InterPro:IPR000421 InterPro:IPR000742 Pfam:PF00754
PROSITE:PS01285 PROSITE:PS01286 PROSITE:PS50022 PROSITE:PS50026
SMART:SM00181 SMART:SM00231 INTERPRO:IPR002181 GO:GO:0007165
GO:GO:0007155 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 InterPro:IPR008979
SUPFAM:SSF49785 InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025
Gene3D:3.90.215.10 InterPro:IPR014716 SMART:SM00186 SUPFAM:SSF56496
PROSITE:PS51406 Pfam:PF02210 EMBL:AC010528 EMBL:AC106741
IPI:IPI00216250 HGNC:HGNC:18747 ProteinModelPortal:E9PDN6
SMR:E9PDN6 PRIDE:E9PDN6 Ensembl:ENST00000476707 UCSC:uc002fex.1
OMA:CMRLISI ArrayExpress:E9PDN6 Bgee:E9PDN6 Uniprot:E9PDN6
Length = 1311
Score = 171 (65.3 bits), Expect = 5.4e-12, Sum P(2) = 5.4e-12
Identities = 79/300 (26%), Positives = 127/300 (42%)
Query: 92 SSYLRYQGL-GEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLND-RYVDFT 149
+SYL + GE LS D++ FK +G+ L N G+ DFI + L V F+
Sbjct: 804 ASYLHFPTFHGE--LSA-DVSFFFKTTASSGVFLENL----GIADFIRIELRSPTVVTFS 856
Query: 150 FDLGTGAATLRSSNPISLGE--WHKLRLTRTGRHAYLQVDRF-PSSQILSPGPFTQXXXX 206
FD+G G + +P + WH +R+ R + A LQVD+ P +Q P P
Sbjct: 857 FDVGNGPFEISVQSPTHFNDNQWHHVRVERNMKEASLQVDQLTPKTQ---PAPADGHVLL 913
Query: 207 XXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVN--CAHPCI 264
+ V + F+GCI+ + +N L+ L E Q V C C
Sbjct: 914 Q------LNSQLFVGGTATRQRGFLGCIRSLQLNGMTLD-LEERAQVTPEVQPGCRGHCS 966
Query: 265 T--QPC-GSGSCVPLYDGYKCVCTQSCKESHL-TEVMCASFDHGASFLHYLDPEIIHSSG 320
+ + C G C G+ C CT S + + A F G+S ++ + S
Sbjct: 967 SYGKLCRNGGKCRERPIGFFCDCTFSAYTGPFCSNEISAYFGSGSSVIYNFQENYLLSKN 1026
Query: 321 LLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGI-HNGYAHVMY 379
+ H D +++ E I +T+ + L+L+ SS K++L++ I NG + Y
Sbjct: 1027 SSSHAASFHGDMKLSR-EM-IKFSFRTTRTPSLLLFV-SSFYKEYLSVIIAKNGSLQIRY 1083
Score = 78 (32.5 bits), Expect = 5.4e-12, Sum P(2) = 5.4e-12
Identities = 23/90 (25%), Positives = 41/90 (45%)
Query: 43 LEDKCNKTPCEHGGKCITTPGSSYCLCP-LGFTGDLCQTRL---DLQVPQFNGSS----Y 94
+ D+C CEHGG+C + + +C C G+ G C + + + G++ Y
Sbjct: 552 ISDRCLPNYCEHGGECSQSWSTFHCNCTNTGYRGATCHNSIYEQSCEAYKHRGNTSGFYY 611
Query: 95 LRYQGLG--EQYLSLLDLT-IVFKAIEPNG 121
+ G G E +L ++T + I+ NG
Sbjct: 612 IDSDGSGPLEPFLLYCNMTETAWTIIQHNG 641
>MGI|MGI:2183572 [details] [associations]
symbol:Cntnap4 "contactin associated protein-like 4"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030425 "dendrite" evidence=IDA]
InterPro:IPR000421 InterPro:IPR000742 Pfam:PF00754 PROSITE:PS01285
PROSITE:PS01286 PROSITE:PS50022 PROSITE:PS50026 SMART:SM00181
SMART:SM00231 MGI:MGI:2183572 INTERPRO:IPR002181 GO:GO:0016021
GO:GO:0007165 GO:GO:0030425 GO:GO:0007155 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR008979 SUPFAM:SSF49785
InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025 EMBL:CH466525
SUPFAM:SSF56496 PROSITE:PS00514 PROSITE:PS51406 Pfam:PF02210
HOVERGEN:HBG057718 eggNOG:NOG291100 GeneTree:ENSGT00560000076804
CTD:85445 EMBL:AF333770 EMBL:AK142816 EMBL:BC034628 IPI:IPI00120292
RefSeq:NP_569724.2 UniGene:Mm.209232 UniGene:Mm.403088
ProteinModelPortal:Q99P47 SMR:Q99P47 STRING:Q99P47
PhosphoSite:Q99P47 PaxDb:Q99P47 PRIDE:Q99P47
Ensembl:ENSMUST00000034225 GeneID:170571 KEGG:mmu:170571
NextBio:370119 Bgee:Q99P47 CleanEx:MM_CNTNAP4 Genevestigator:Q99P47
GermOnline:ENSMUSG00000031772 Uniprot:Q99P47
Length = 1310
Score = 165 (63.1 bits), Expect = 5.8e-12, Sum P(2) = 5.8e-12
Identities = 96/385 (24%), Positives = 153/385 (39%)
Query: 64 SSYCLCPLGFTGDLCQTRLDLQVPQFNG-SSYLRYQGL-GEQYLSLLDLTIVFKAIEPNG 121
++Y L PL GD R FN +SYL + GE LS D++ FK +G
Sbjct: 778 AAYKLGPLLCRGD----RPFWNAASFNTEASYLHFPTFHGE--LSA-DVSFFFKTTALSG 830
Query: 122 ILLYNGHRADGVGDFIALYLND-RYVDFTFDLGTGAATLRSSNPISLGE--WHKLRLTRT 178
+ L N G+ DFI + L V F+FD+G G L +P + WH +R+ R
Sbjct: 831 VFLENL----GITDFIRIELRSPTTVTFSFDVGNGPFELSVHSPTHFNDNQWHHVRVERN 886
Query: 179 GRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVL 238
+ A L+VD P P Q + V + F+GCI+ +
Sbjct: 887 MKEASLRVDELP--------PKIQAAPTDGHVLLQLNSQLFVGGTATRQRGFLGCIRSLQ 938
Query: 239 INNHELNILGEAIQGVNVV-NCAHPCIT--QPCG-SGSCVPLYDGYKCVCTQSCKESHL- 293
+N L++ A V C C + + C G C G+ C C+ S
Sbjct: 939 LNGMALDLEERATVTPGVQPGCRGHCGSYGKLCRHGGKCREKPSGFFCDCSSSAYAGPFC 998
Query: 294 TEVMCASFDHGASFLHYLDPEIIHSSGLLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGL 353
++ + A F G+S ++ S + H D +++ E I +T+ + L
Sbjct: 999 SKEISAYFGSGSSVIYNFQENYSLSKNSSFHAASFHGDMKLSR-EM-IKFSFRTTRAPSL 1056
Query: 354 ILWTGSSQSKDFLALGI-HNGYAHVMYXXXXXXX-XXXXXQTK-INNGVWHRLTVHRNF- 409
+L SS K++L++ I NG + Y K + +G H + ++R
Sbjct: 1057 LLHM-SSFYKEYLSIIIAKNGSLQIRYKLNKYHEPDVISFDLKSMADGQLHHIKINREEG 1115
Query: 410 MVVMHGSSHTRSNK--SSKIEFKCL 432
MV + +TR SS EF +
Sbjct: 1116 MVFVEIDENTRRQTYLSSGTEFSAV 1140
Score = 128 (50.1 bits), Expect = 0.00023, P = 0.00023
Identities = 57/244 (23%), Positives = 100/244 (40%)
Query: 114 FKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFT-FDLGTGAATLRSSNPISLGEWHK 172
F+ G+LL++ + V + L L+D + T + G + + + + G+WH
Sbjct: 400 FRTWNKAGLLLFSELQL--VSGSLLLLLSDGKLKLTLYQPGKSPSDITAGAGLGDGQWHS 457
Query: 173 LRLTRTGRHAYLQVDRF--PSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSPKVKIKSSF 230
+ L+ H + VD P+S L P Q GG PD S F
Sbjct: 458 VSLSAKRNHLSVVVDGHISPASPWLGP---EQVNSGGVFYFGGCPDKGFGSKCKSPLGGF 514
Query: 231 IGCIQKVLINNHELNILG--EAIQG----VNVVNC--AHPCITQPCG-SGSCVPLYDGYK 281
GC++ + INN ++++ + G + + +C + C+ C G C + +
Sbjct: 515 QGCMRLISINNKMVDLIAVQQGALGNFSDLQIDSCGISDRCLPNSCEHGGECSQSWSTFH 574
Query: 282 CVCTQS------CKESHLTEVMCASFDH--GASFLHYLDPEIIHSSGLLHYKFQLHVDFR 333
C CT + C S + E C ++ H AS +Y+D + SG L F L+ +
Sbjct: 575 CNCTNTGYTGATCHSS-VYEQSCEAYKHQGNASGFYYIDSD---GSGPLQ-PFLLYCNMT 629
Query: 334 ITGY 337
T +
Sbjct: 630 ETAW 633
Score = 84 (34.6 bits), Expect = 5.8e-12, Sum P(2) = 5.8e-12
Identities = 14/39 (35%), Positives = 22/39 (56%)
Query: 43 LEDKCNKTPCEHGGKCITTPGSSYCLCP-LGFTGDLCQT 80
+ D+C CEHGG+C + + +C C G+TG C +
Sbjct: 551 ISDRCLPNSCEHGGECSQSWSTFHCNCTNTGYTGATCHS 589
>WB|WBGene00002248 [details] [associations]
symbol:lam-3 species:6239 "Caenorhabditis elegans"
[GO:0005604 "basement membrane" evidence=IEA;IDA] [GO:0005102
"receptor binding" evidence=IEA] [GO:0005606 "laminin-1 complex"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040018 "positive regulation of multicellular organism growth"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0009790 "embryo development" evidence=IMP] InterPro:IPR009254
InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009 GO:GO:0009792
GO:GO:0040007 GO:GO:0002119 GO:GO:0030155 GO:GO:0010171
GO:GO:0040011 GO:GO:0040018 GO:GO:0007155 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 GO:GO:0005604
HSSP:P02468 Pfam:PF02210 GO:GO:0045995 GeneTree:ENSGT00700000104140
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 KO:K05637 GO:GO:0005606 EMBL:Z81125
EMBL:AF074902 EMBL:AL008585 PIR:F87908 PIR:T23064 PIR:T43291
RefSeq:NP_492775.2 UniGene:Cel.19655 ProteinModelPortal:G5ECE3
SMR:G5ECE3 EnsemblMetazoa:T22A3.8 GeneID:172952
KEGG:cel:CELE_T22A3.8 CTD:172952 WormBase:T22A3.8 OMA:TAINEAH
NextBio:877661 Uniprot:G5ECE3
Length = 3102
Score = 169 (64.5 bits), Expect = 5.9e-12, Sum P(3) = 5.9e-12
Identities = 36/79 (45%), Positives = 49/79 (62%)
Query: 110 LTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGA-ATLRSSNPISLG 168
+T++F A PNG+L + G A G DF+A+YLND V F +LG G+ A L S N + G
Sbjct: 2492 ITVIFNAFSPNGLLYFRGSEASG--DFVAIYLNDGKVMFKINLGGGSVAELTSQNVYNDG 2549
Query: 169 EWHKLRLTRTGRHAYLQVD 187
+ H ++ RTG YLQVD
Sbjct: 2550 KEHTVKAIRTGSEMYLQVD 2568
Score = 108 (43.1 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 42/152 (27%), Positives = 63/152 (41%)
Query: 114 FKAIEPNGILLYNGHRA----------DGVGDFIALYLNDRYVDFTFDLGTGA----ATL 159
F+ E NG L+Y + DG G +IA YL Y+ F + T
Sbjct: 2680 FRTREENGTLVYQSSKLQKVSKRDSEDDGKG-YIAFYLFRGYLVLHFGKDASSRKEVVTF 2738
Query: 160 RSSNPISLGEWHKLRLTRTGRHAYLQVD--RFPSSQILSPGPFTQXXXXXXXXXGGVPDY 217
RSS+P + G+ H + + R G+ ++VD SQ LS G D
Sbjct: 2739 RSSHPYNDGQVHAVFMERNGKIISVKVDDKEIGDSQSLSDETSVGTTSGRLILGGFSDDL 2798
Query: 218 NIVSPKVKIKSSFIGCIQKVLINNHELNILGE 249
+ ++ I S FIGCI V +N +++ E
Sbjct: 2799 KPPNNEIPITSFFIGCISDVFLNMKRVSLAPE 2830
Score = 80 (33.2 bits), Expect = 5.9e-12, Sum P(3) = 5.9e-12
Identities = 17/71 (23%), Positives = 34/71 (47%)
Query: 338 EFNIDMRIKTSSSSGLI-LWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTKIN 396
+F + + ++T +S+G+I W ++ L I +G+A + +IN
Sbjct: 2935 DFTVKLSLQTETSNGMIWAWANYKNYTRYIFLDIIDGFATLEVKGHKQPKILKHLGNRIN 2994
Query: 397 NGVWHRLTVHR 407
+G WH +TV +
Sbjct: 2995 DGQWHDITVEK 3005
Score = 56 (24.8 bits), Expect = 5.9e-12, Sum P(3) = 5.9e-12
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 39 SKECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQ 79
S+ C E C PC G+ + P C+CP G++C+
Sbjct: 1128 SEGCTE--CE--PCPAPGQ-VCDPIDGSCVCPPNTVGEMCE 1163
Score = 55 (24.4 bits), Expect = 7.5e-12, Sum P(3) = 7.5e-12
Identities = 14/52 (26%), Positives = 21/52 (40%)
Query: 32 GNKIKGRSKECLEDKCNKTPCEHGGKCITTP-GSSY-C-LCPLGFTGDLCQT 80
G+ +G + C + C C+ G Y C C G+TG C+T
Sbjct: 1577 GDAREGGANACTKCACPLVENSFSDSCVAVDHGRGYVCNSCKPGYTGQYCET 1628
Score = 49 (22.3 bits), Expect = 3.0e-11, Sum P(3) = 3.0e-11
Identities = 10/35 (28%), Positives = 17/35 (48%)
Query: 46 KCNKTPCEHGGKCITTPGSSYCL-CPLGFTGDLCQ 79
+C T G + + C+ CPLG+ G+ C+
Sbjct: 837 ECISTELAVLGSVASNEDNYVCINCPLGYEGNKCE 871
Score = 48 (22.0 bits), Expect = 3.8e-11, Sum P(3) = 3.8e-11
Identities = 10/18 (55%), Positives = 11/18 (61%)
Query: 63 GSSYCL-CPLGFTGDLCQ 79
G CL CP G+TG CQ
Sbjct: 1493 GVEKCLGCPQGYTGLSCQ 1510
Score = 48 (22.0 bits), Expect = 3.8e-11, Sum P(3) = 3.8e-11
Identities = 18/54 (33%), Positives = 20/54 (37%)
Query: 31 DGNKIKGRSKECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTG---DLCQTR 81
D I G C C+ HG C P S C C G TG +CQ R
Sbjct: 1636 DPQHIGGTCSPC---DCHPDGSLHGA-C--NPLSGQCECKPGVTGRTCSMCQER 1683
Score = 45 (20.9 bits), Expect = 7.7e-11, Sum P(3) = 7.7e-11
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 63 GSSYCLCPLGFTGDLCQT 80
G C CP F G+ C++
Sbjct: 737 GVEVCECPENFAGNSCES 754
Score = 45 (20.9 bits), Expect = 7.7e-11, Sum P(3) = 7.7e-11
Identities = 12/37 (32%), Positives = 14/37 (37%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLD 83
CN GKC T G C C G +C+ D
Sbjct: 1038 CNIYGSIEDGKCDQTTGK--CECRENVEGTMCEKCAD 1072
Score = 44 (20.5 bits), Expect = 9.7e-11, Sum P(3) = 9.7e-11
Identities = 16/51 (31%), Positives = 19/51 (37%)
Query: 45 DKCNKTPCEHGGK----CITTPGSSYCLCPLGFTGDLCQTRLDLQVPQFNG 91
D C C+ G C G C+C G TG C + L P F G
Sbjct: 1081 DGCEDCGCDPTGSEDVSCNLVTGQ--CVCKPGVTGLKCDSCL----PNFYG 1125
Score = 43 (20.2 bits), Expect = 1.2e-10, Sum P(3) = 1.2e-10
Identities = 13/39 (33%), Positives = 18/39 (46%)
Query: 43 LEDKC--NKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQ 79
+ D C + E+G K PG C+C GF G C+
Sbjct: 431 VSDACVRDDQSAENGQK----PGD--CICKPGFGGRRCE 463
Score = 43 (20.2 bits), Expect = 1.2e-10, Sum P(3) = 1.2e-10
Identities = 15/41 (36%), Positives = 18/41 (43%)
Query: 37 GRSKECLEDKCNKTPCEHGGKCITTPGSSYCL-CPLGFTGD 76
G S+ C D T CEH T G +C C G+ GD
Sbjct: 1544 GHSQTCNPDTSVCTDCEHN-----TFGD-FCEHCLPGYIGD 1578
Score = 39 (18.8 bits), Expect = 8.0e-08, Sum P(3) = 8.0e-08
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 415 GSSHTRSNKSSKIEFK 430
G+ H KSSK+ F+
Sbjct: 2856 GNGHNGHRKSSKLSFE 2871
>UNIPROTKB|F5H107 [details] [associations]
symbol:CNTNAP4 "Contactin-associated protein-like 4"
species:9606 "Homo sapiens" [GO:0007155 "cell adhesion"
evidence=IEA] InterPro:IPR000421 InterPro:IPR000742 Pfam:PF00754
PROSITE:PS01285 PROSITE:PS01286 PROSITE:PS50022 PROSITE:PS50026
SMART:SM00181 SMART:SM00231 INTERPRO:IPR002181 GO:GO:0007165
GO:GO:0007155 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 InterPro:IPR008979
SUPFAM:SSF49785 InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025
Gene3D:3.90.215.10 InterPro:IPR014716 SMART:SM00186 SUPFAM:SSF56496
PROSITE:PS51406 Pfam:PF02210 EMBL:AC010528 EMBL:AC106741
IPI:IPI00644276 HGNC:HGNC:18747 ProteinModelPortal:F5H107
SMR:F5H107 Ensembl:ENST00000377504 ArrayExpress:F5H107 Bgee:F5H107
Uniprot:F5H107
Length = 1259
Score = 170 (64.9 bits), Expect = 6.3e-12, Sum P(2) = 6.3e-12
Identities = 79/300 (26%), Positives = 127/300 (42%)
Query: 92 SSYLRYQGL-GEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLND-RYVDFT 149
+SYL + GE LS D++ FK +G+ L N G+ DFI + L V F+
Sbjct: 752 ASYLHFPTFHGE--LSA-DVSFFFKTTASSGVFLENL----GIADFIRIELRSPTVVTFS 804
Query: 150 FDLGTGAATLRSSNPISLGE--WHKLRLTRTGRHAYLQVDRF-PSSQILSPGPFTQXXXX 206
FD+G G + +P + WH +R+ R + A LQVD+ P +Q P P
Sbjct: 805 FDVGNGPFEISVQSPTHFNDNQWHHVRVERNMKEASLQVDQLTPKTQ---PAPADGHVLL 861
Query: 207 XXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVN--CAHPCI 264
+ V + F+GCI+ + +N L+ L E Q V C C
Sbjct: 862 Q------LNSQLFVGGTATRQRGFLGCIRSLQLNGMTLD-LEERAQVTPEVQPGCRGHCS 914
Query: 265 T--QPC-GSGSCVPLYDGYKCVCTQSCKESHL-TEVMCASFDHGASFLHYLDPEIIHSSG 320
+ + C G C G+ C CT S + + A F G+S ++ + S
Sbjct: 915 SYGKLCRNGGKCRERPIGFFCDCTFSAYTGPFCSNEISAYFGSGSSVIYNFQENYLLSKN 974
Query: 321 LLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGI-HNGYAHVMY 379
+ H D +++ E I +T+ + L+L+ SS K++L++ I NG + Y
Sbjct: 975 SSSHAASFHGDMKLSR-EM-IKFSFRTTRTPSLLLFV-SSFYKEYLSVIIAKNGDLQIRY 1031
Score = 78 (32.5 bits), Expect = 6.3e-12, Sum P(2) = 6.3e-12
Identities = 23/90 (25%), Positives = 41/90 (45%)
Query: 43 LEDKCNKTPCEHGGKCITTPGSSYCLCP-LGFTGDLCQTRL---DLQVPQFNGSS----Y 94
+ D+C CEHGG+C + + +C C G+ G C + + + G++ Y
Sbjct: 500 ISDRCLPNYCEHGGECSQSWSTFHCNCTNTGYRGATCHNSIYEQSCEAYKHRGNTSGFYY 559
Query: 95 LRYQGLG--EQYLSLLDLT-IVFKAIEPNG 121
+ G G E +L ++T + I+ NG
Sbjct: 560 IDSDGSGPLEPFLLYCNMTETAWTIIQHNG 589
>UNIPROTKB|F1LS74 [details] [associations]
symbol:Slit1 "Slit homolog 1 protein" species:10116 "Rattus
norvegicus" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
RGD:69307 GO:GO:0005737 GO:GO:0005615 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0008045
PROSITE:PS01186 InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274
SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0040023 GO:GO:0031290
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 GO:GO:0048846 Pfam:PF12661 GO:GO:0033563 Pfam:PF01463
GeneTree:ENSGT00700000104083 GO:GO:0022028 GO:GO:0050919
IPI:IPI00389760 Ensembl:ENSRNOT00000034758 ArrayExpress:F1LS74
Uniprot:F1LS74
Length = 1417
Score = 198 (74.8 bits), Expect = 6.4e-12, P = 6.4e-12
Identities = 74/271 (27%), Positives = 116/271 (42%)
Query: 45 DKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQY 104
+ C T C++G C+ C C GF G C+ +L L V + +YL++ L Q
Sbjct: 1012 NSCEGTECQNGANCVDQGSRPVCQCLPGFGGPECE-KL-LSVNFVDRDTYLQFTDL--QN 1067
Query: 105 LSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGT-GAATLRSSN 163
++T+ E NGILLYNG D IA+ L +V ++D G+ ++ + S+
Sbjct: 1068 WPRANITLQVSTAEDNGILLYNGDN-----DHIAVELYQGHVRVSYDPGSYPSSAIYSAE 1122
Query: 164 PISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVP-DYNIVSP 222
I+ G++H + L + L +D + + G GG+P D N +
Sbjct: 1123 TINDGQFHTVELVTFDQMVNLSIDGGSPMTMDNFGKHYTLNSEAPLYVGGMPVDVNSAAF 1182
Query: 223 KV-KIKS--SFIGCIQKVLINNHELNILGEAIQGVNVVNCAHPCITQPCGSGSCVP-LYD 278
++ +I + SF GCI+ + INN EL + VV PC C G C P
Sbjct: 1183 RLWQILNGTSFHGCIRNLYINN-ELQDFTKTQMKPGVVPGCEPCRKLYCLHGICQPNATP 1241
Query: 279 GYKCVCTQSCKESHLTEVMCASFDHGASFLH 309
G C C H + + HG +H
Sbjct: 1242 GPVCHCEAGWGGLHCDQPVDGPC-HGHKCVH 1271
Score = 101 (40.6 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 20/49 (40%), Positives = 26/49 (53%)
Query: 37 GRSKECLEDKCNK--TPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLD 83
GR+ E L D C+ PC+H +C+ TP C C G+TGD C D
Sbjct: 923 GRACEQLVDFCSPDLNPCQHEAQCVGTPEGPRCECVPGYTGDNCSKNQD 971
Score = 99 (39.9 bits), Expect = 2.1e-07, Sum P(4) = 2.1e-07
Identities = 18/46 (39%), Positives = 24/46 (52%)
Query: 45 DKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQFN 90
D C K C +GG C+ G+ C CPL +TG C+ +D P N
Sbjct: 893 DDCVKHDCVNGGVCVDGIGNYTCQCPLQYTGRACEQLVDFCSPDLN 938
Score = 94 (38.1 bits), Expect = 6.9e-07, Sum P(4) = 6.9e-07
Identities = 20/51 (39%), Positives = 23/51 (45%)
Query: 36 KGRSKECLEDKCNKTPCEHGGKCITTPGSSY---CLCPLGFTGDLCQTRLD 83
KGR+ E D C+ PC +GG C G C CP GF G C D
Sbjct: 843 KGRNCEVSLDSCSSNPCGNGGTCHAQEGEDAGFTCSCPSGFEGLTCGMNTD 893
Score = 89 (36.4 bits), Expect = 2.3e-06, Sum P(4) = 2.3e-06
Identities = 16/40 (40%), Positives = 21/40 (52%)
Query: 45 DKCNKTPCEHGGKCITTPGSSY-CLCPLGFTGDLCQTRLD 83
D C +PC++ G C P Y C CP G+ G C+ LD
Sbjct: 813 DPCLSSPCQNQGTCHNDPLEVYRCTCPSGYKGRNCEVSLD 852
Score = 87 (35.7 bits), Expect = 5.3e-05, Sum P(3) = 5.3e-05
Identities = 13/36 (36%), Positives = 21/36 (58%)
Query: 44 EDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQ 79
+D C C++G +C+ S CLC G++G LC+
Sbjct: 970 QDDCKDHQCQNGAQCVDEINSYACLCAEGYSGQLCE 1005
Score = 76 (31.8 bits), Expect = 2.1e-07, Sum P(4) = 2.1e-07
Identities = 15/62 (24%), Positives = 31/62 (50%)
Query: 340 NIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGV 399
NI +++ T+ +G++L+ G + D +A+ ++ G+ V Y IN+G
Sbjct: 1072 NITLQVSTAEDNGILLYNGDN---DHIAVELYQGHVRVSYDPGSYPSSAIYSAETINDGQ 1128
Query: 400 WH 401
+H
Sbjct: 1129 FH 1130
Score = 67 (28.6 bits), Expect = 2.1e-07, Sum P(4) = 2.1e-07
Identities = 21/65 (32%), Positives = 32/65 (49%)
Query: 446 IRIDTDYSMQSISGGKFEQLNTDSGLYVGGVE-DIEELTRSKYH----HSFKGWISNLIL 500
+ ID M + GK LN+++ LYVGG+ D+ + SF G I NL +
Sbjct: 1143 LSIDGGSPMTMDNFGKHYTLNSEAPLYVGGMPVDVNSAAFRLWQILNGTSFHGCIRNLYI 1202
Query: 501 SNDYQ 505
+N+ Q
Sbjct: 1203 NNELQ 1207
Score = 53 (23.7 bits), Expect = 2.1e-07, Sum P(4) = 2.1e-07
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 249 EAIQGVNVVNCAH---PCITQPCGSGS-CVPLYDGYKCVCTQ 286
E + G NC+ C C +G+ CV + Y C+C +
Sbjct: 956 ECVPGYTGDNCSKNQDDCKDHQCQNGAQCVDEINSYACLCAE 997
Score = 51 (23.0 bits), Expect = 3.2e-07, Sum P(4) = 3.2e-07
Identities = 14/36 (38%), Positives = 16/36 (44%)
Query: 259 CAHP--CITQPCGSG-SCVPLYDGYKCVCTQS-CKE 290
C H C+ P G CVP Y G C Q CK+
Sbjct: 940 CQHEAQCVGTPEGPRCECVPGYTGDNCSKNQDDCKD 975
Score = 46 (21.3 bits), Expect = 1.1e-05, Sum P(4) = 1.1e-05
Identities = 9/26 (34%), Positives = 12/26 (46%)
Query: 263 CITQPCGSGSCVPLYDGYKCVCTQSC 288
C + PCG+G +G T SC
Sbjct: 854 CSSNPCGNGGTCHAQEGEDAGFTCSC 879
>UNIPROTKB|P25391 [details] [associations]
symbol:LAMA1 "Laminin subunit alpha-1" species:9606 "Homo
sapiens" [GO:0005102 "receptor binding" evidence=IEA] [GO:0030155
"regulation of cell adhesion" evidence=IEA] [GO:0030334 "regulation
of cell migration" evidence=IEA] [GO:0045995 "regulation of
embryonic development" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0002011 "morphogenesis of an epithelial sheet"
evidence=IEA] [GO:0005911 "cell-cell junction" evidence=IEA]
[GO:0043208 "glycosphingolipid binding" evidence=IEA] [GO:0045198
"establishment of epithelial cell apical/basal polarity"
evidence=IEA] [GO:0060441 "epithelial tube branching involved in
lung morphogenesis" evidence=IEA] [GO:0060445 "branching involved
in salivary gland morphogenesis" evidence=IEA] [GO:0061304 "retinal
blood vessel morphogenesis" evidence=IEA] [GO:0005606 "laminin-1
complex" evidence=IDA;IPI] [GO:0005608 "laminin-3 complex"
evidence=IPI] [GO:0005201 "extracellular matrix structural
constituent" evidence=ISS] [GO:0005578 "proteinaceous extracellular
matrix" evidence=ISS] [GO:0007166 "cell surface receptor signaling
pathway" evidence=ISS] [GO:0005615 "extracellular space"
evidence=IDA] [GO:0005604 "basement membrane" evidence=IDA]
[GO:0005576 "extracellular region" evidence=TAS] [GO:0007411 "axon
guidance" evidence=TAS] [GO:0031012 "extracellular matrix"
evidence=TAS] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway
Reactome:REACT_111045 Reactome:REACT_111102 GO:GO:0007411
GO:GO:0005615 GO:GO:0030155
Pathway_Interaction_DB:syndecan_2_pathway GO:GO:0007155
Pathway_Interaction_DB:glypican_1pathway GO:GO:0005911
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0007166
Pathway_Interaction_DB:syndecan_4_pathway PROSITE:PS01186
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 Pathway_Interaction_DB:amb2_neutrophils_pathway
DrugBank:DB00009 DrugBank:DB00029 DrugBank:DB00031 GO:GO:0060441
GO:GO:0060445 GO:GO:0045198 DrugBank:DB00015 GO:GO:0045995
GO:GO:0005201 GO:GO:0043208 GO:GO:0002011 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0061304 EMBL:AP002409 EMBL:AP005062 EMBL:AP005210 EMBL:X58531
IPI:IPI00375294 PIR:S14458 RefSeq:NP_005550.2 UniGene:Hs.270364
ProteinModelPortal:P25391 SMR:P25391 DIP:DIP-29324N
MINT:MINT-6740485 STRING:P25391 PhosphoSite:P25391 PaxDb:P25391
PRIDE:P25391 Ensembl:ENST00000389658 GeneID:284217 KEGG:hsa:284217
UCSC:uc002knm.3 CTD:284217 GeneCards:GC18M006941 H-InvDB:HIX0014316
HGNC:HGNC:6481 HPA:CAB010179 MIM:150320 neXtProt:NX_P25391
PharmGKB:PA30270 eggNOG:NOG247347 HOGENOM:HOG000293201
HOVERGEN:HBG052298 InParanoid:P25391 KO:K05637 OMA:EPFYWRL
OrthoDB:EOG4K3KVB ChiTaRS:LAMA1 GenomeRNAi:284217 NextBio:94628
ArrayExpress:P25391 Bgee:P25391 CleanEx:HS_LAMA1
Genevestigator:P25391 GermOnline:ENSG00000101680 GO:GO:0005606
GO:GO:0005608 Uniprot:P25391
Length = 3075
Score = 144 (55.7 bits), Expect = 1.3e-09, Sum P(4) = 1.3e-09
Identities = 58/202 (28%), Positives = 92/202 (45%)
Query: 89 FNGSSYLRYQGLGEQYL--SLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYV 146
F+GS Y + E+ L ++ + ++F PNG+LLY G + G DF+++ L V
Sbjct: 2310 FDGSGY----SVVEKSLPATVTQIIMLFNTFSPNGLLLYLG--SYGTKDFLSIELFRGRV 2363
Query: 147 DFTFDLGTGAATLRSSNPISLGEWHKLRLTRTGRHAYLQV-DRFPSS-----QILSPGPF 200
DLG+G TL + + G W+K+ R + L V D + +S Q +PG
Sbjct: 2364 KVMTDLGSGPITLLTDRRYNNGTWYKIAFQRNRKQGVLAVIDAYNTSNKETKQGETPGAS 2423
Query: 201 TQXXXXXXX--XXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVN 258
+ GG+P +V V KS F+GCI+ + I+ ++L + GV
Sbjct: 2424 SDLNRLDKDPIYVGGLPRSRVVRRGVTTKS-FVGCIKNLEISRSTFDLLRNSY-GVR--- 2478
Query: 259 CAHPCITQPCGSGSCVPLYDGY 280
C+ +P S S L GY
Sbjct: 2479 --KGCLLEPIRSVSF--LKGGY 2496
Score = 129 (50.5 bits), Expect = 6.9e-12, Sum P(4) = 6.9e-12
Identities = 41/146 (28%), Positives = 63/146 (43%)
Query: 110 LTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSN-PISLG 168
LT+ K EP+ +L Y G + DF+A+ + V F +DLG+G+ L + PI
Sbjct: 2142 LTLNVKTQEPDNLLFYLG--SSTASDFLAVEMRRGRVAFLWDLGSGSTRLEFPDFPIDDN 2199
Query: 169 EWHKLRLTRTGRHAYLQVDRFPSSQ------ILSPGPFT--QXXXXXXXXXGGVPDYNIV 220
WH + + R G L V S+Q SPG GG+
Sbjct: 2200 RWHSIHVARFGNIGSLSVKEMSSNQKSPTKTSKSPGTANVLDVNNSTLMFVGGLGGQIKK 2259
Query: 221 SPKVKIKSSFIGCIQKVLINNHELNI 246
SP VK+ + F GC+ + +N + +
Sbjct: 2260 SPAVKV-THFKGCLGEAFLNGKSIGL 2284
Score = 128 (50.1 bits), Expect = 1.6e-05, Sum P(4) = 1.6e-05
Identities = 42/176 (23%), Positives = 68/176 (38%)
Query: 108 LDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSNPISL 167
L + + + +G++ Y H+ D+ L L+ + F FDLG G + +S
Sbjct: 2737 LSVELSIRTFASSGLIYYMAHQNQA--DYAVLQLHGGRLHFMFDLGKGRTKVSHPALLSD 2794
Query: 168 GEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSPKVKIK 227
G+WH ++ R ++ VD S + G T GG+P I
Sbjct: 2795 GKWHTVKTDYVKRKGFITVDGRESPMVTVVGDGTMLDVEGLFYLGGLPSQYQARKIGNIT 2854
Query: 228 SSFIGCIQKVLINNHELNILGEAIQGVNVVNCAHPCI--TQPCGSGSCVPLYDGYK 281
S CI V +N+ +L+ + V C T GSG + +GYK
Sbjct: 2855 HSIPACIGDVTVNSKQLD-KDSPVSAFTVNRCYAVAQEGTYFDGSGYAALVKEGYK 2909
Score = 102 (41.0 bits), Expect = 6.9e-12, Sum P(4) = 6.9e-12
Identities = 27/88 (30%), Positives = 42/88 (47%)
Query: 341 IDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGVW 400
I M T S +GL+L+ GS +KDFL++ + G VM + NNG W
Sbjct: 2329 IIMLFNTFSPNGLLLYLGSYGTKDFLSIELFRGRVKVM-TDLGSGPITLLTDRRYNNGTW 2387
Query: 401 HRLTVHRNFM--VVMHGSSHTRSNKSSK 426
+++ RN V+ ++ SNK +K
Sbjct: 2388 YKIAFQRNRKQGVLAVIDAYNTSNKETK 2415
Score = 83 (34.3 bits), Expect = 1.3e-09, Sum P(4) = 1.3e-09
Identities = 18/73 (24%), Positives = 35/73 (47%)
Query: 338 EFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINN 397
+ ++++ I+T +SSGLI + D+ L +H G H M+ +++
Sbjct: 2736 KLSVELSIRTFASSGLIYYMAHQNQADYAVLQLHGGRLHFMFDLGKGRTKVSH-PALLSD 2794
Query: 398 GVWHRLTVHRNFM 410
G WH TV +++
Sbjct: 2795 GKWH--TVKTDYV 2805
Score = 62 (26.9 bits), Expect = 6.9e-12, Sum P(4) = 6.9e-12
Identities = 19/66 (28%), Positives = 31/66 (46%)
Query: 437 LHRTGKQCLIRIDTDYSMQSISGGKFEQLNTD-SGLYVGGVEDIEELTRSKYHHSFKGWI 495
L R + +++D + ++ G E + S LYVGG+ + E + SF G I
Sbjct: 2588 LVRNRRIITVQLDENNPVEMKLGTLVESRTINVSNLYVGGIPEGEGTSLLTMRRSFHGCI 2647
Query: 496 SNLILS 501
NLI +
Sbjct: 2648 KNLIFN 2653
Score = 59 (25.8 bits), Expect = 6.9e-12, Sum P(4) = 6.9e-12
Identities = 17/42 (40%), Positives = 20/42 (47%)
Query: 47 CNKTPCE-HG---GKCITTPGSSYCLCPLGFTG---DLCQTR 81
C K C HG G C T G C+C LG +G D C+ R
Sbjct: 1506 CQKCDCNPHGSVHGDCDRTSGQ--CVCRLGASGLRCDECEPR 1545
Score = 58 (25.5 bits), Expect = 3.5e-07, Sum P(4) = 3.5e-07
Identities = 20/75 (26%), Positives = 35/75 (46%)
Query: 338 EFNIDMRIKTSSSSGLILWTGSSQSK-DFLALGIHNGYA--HVMYXXXXXXXXXX-XXQT 393
+ NI + +TSS +G++L G S +K D + L + +G HV T
Sbjct: 2913 DVNITLEFRTSSQNGVLL--GISTAKVDAIGLELVDGKVLFHVNNGAGRITAAYEPKTAT 2970
Query: 394 KINNGVWHRLTVHRN 408
+ +G WH L +++
Sbjct: 2971 VLCDGKWHTLQANKS 2985
Score = 52 (23.4 bits), Expect = 3.4e-11, Sum P(4) = 3.4e-11
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 66 YCLCPLGFTGDLCQTRL 82
+C CP G+TG C++ L
Sbjct: 708 HCECPQGYTGTSCESCL 724
Score = 51 (23.0 bits), Expect = 4.3e-11, Sum P(4) = 4.3e-11
Identities = 14/40 (35%), Positives = 19/40 (47%)
Query: 39 SKECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLC 78
S C++D + H GK PG C C G+TG+ C
Sbjct: 406 SSVCIKDDLHSDL--HNGK---QPGQ--CPCKEGYTGEKC 438
Score = 47 (21.6 bits), Expect = 2.1e-10, Sum P(4) = 2.1e-10
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 464 QLNTDSGLYVGGVEDIEELTRSKYHHSFKGWISNLILS 501
+L+ D +YVGG+ + R SF G I NL +S
Sbjct: 2428 RLDKDP-IYVGGLPRSRVVRRGVTTKSFVGCIKNLEIS 2464
Score = 42 (19.8 bits), Expect = 3.4e-10, Sum P(4) = 3.4e-10
Identities = 7/13 (53%), Positives = 8/13 (61%)
Query: 67 CLCPLGFTGDLCQ 79
C+CP G G CQ
Sbjct: 1362 CVCPPGTVGFSCQ 1374
Score = 42 (19.8 bits), Expect = 3.4e-10, Sum P(4) = 3.4e-10
Identities = 10/37 (27%), Positives = 14/37 (37%)
Query: 44 EDKCNKTPCEHG-GKCITTPGSSYCLCPLGFTGDLCQ 79
+ C C H C P + C+CP G C+
Sbjct: 992 DGSCTPCDCPHTQNTC--DPETGECVCPPHTQGVKCE 1026
Score = 42 (19.8 bits), Expect = 6.6e-10, Sum P(4) = 6.6e-10
Identities = 12/43 (27%), Positives = 22/43 (51%)
Query: 465 LNTDSGLYVGGVEDIEELTRSKYHHSFKGWISNLILSNDYQVK 507
++T++ +YVGG + + SF+G + L L QV+
Sbjct: 3010 VDTNNPIYVGGYPAGVKQKCLRSQTSFRGCLRKLALIKSPQVQ 3052
Score = 37 (18.1 bits), Expect = 1.0e-09, Sum P(4) = 1.0e-09
Identities = 8/32 (25%), Positives = 10/32 (31%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCPLGFTGDLC 78
C C G P + C+C G C
Sbjct: 451 CVSCGCNPVGSASDEPCTGPCVCKENVEGKAC 482
>RGD|69307 [details] [associations]
symbol:Slit1 "slit homolog 1 (Drosophila)" species:10116 "Rattus
norvegicus" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005615
"extracellular space" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0007409 "axonogenesis" evidence=ISO]
[GO:0007411 "axon guidance" evidence=ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0008045 "motor neuron axon guidance"
evidence=IEA;ISO] [GO:0021510 "spinal cord development"
evidence=IEP] [GO:0021772 "olfactory bulb development" evidence=ISO]
[GO:0022028 "tangential migration from the subventricular zone to
the olfactory bulb" evidence=IEA;ISO] [GO:0022029 "telencephalon
cell migration" evidence=ISO] [GO:0031290 "retinal ganglion cell
axon guidance" evidence=IEA;ISO] [GO:0033563 "dorsal/ventral axon
guidance" evidence=IEA;ISO] [GO:0040023 "establishment of nucleus
localization" evidence=IEA;ISO] [GO:0043395 "heparan sulfate
proteoglycan binding" evidence=IDA] [GO:0048495 "Roundabout binding"
evidence=IEA;ISO] [GO:0048812 "neuron projection morphogenesis"
evidence=ISO] [GO:0048843 "negative regulation of axon extension
involved in axon guidance" evidence=IDA] [GO:0048846 "axon extension
involved in axon guidance" evidence=IEA;ISO] [GO:0050919 "negative
chemotaxis" evidence=IEA;ISO] [GO:0051964 "negative regulation of
synapse assembly" evidence=ISS] [GO:0021834 "chemorepulsion involved
in embryonic olfactory bulb interneuron precursor migration"
evidence=ISO] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 RGD:69307 GO:GO:0005737 GO:GO:0005615
GO:GO:0007420 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0008045 PROSITE:PS01186
GO:GO:0043395 InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274
SMART:SM00282 PROSITE:PS50025 GO:GO:0021510 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0040023 GO:GO:0031290
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 GO:GO:0048846 Pfam:PF12661 GO:GO:0033563 GO:GO:0051964
Pfam:PF01463 GO:GO:0022028 GO:GO:0050919 GO:GO:0048843 CTD:6585
HOGENOM:HOG000116120 HOVERGEN:HBG057959 KO:K06838 OrthoDB:EOG4VDPXM
EMBL:AB011530 EMBL:AF133730 EMBL:AB073213 EMBL:AB073214
EMBL:AB073215 EMBL:AB017170 IPI:IPI00389760 IPI:IPI00409983
IPI:IPI00409984 IPI:IPI00409985 PIR:T42218 RefSeq:NP_075242.1
UniGene:Rn.30002 ProteinModelPortal:O88279 SMR:O88279 STRING:O88279
PRIDE:O88279 GeneID:65047 KEGG:rno:65047 UCSC:RGD:69307
InParanoid:O88279 NextBio:613884 ArrayExpress:O88279
Genevestigator:O88279 GermOnline:ENSRNOG00000026065 Uniprot:O88279
Length = 1531
Score = 198 (74.8 bits), Expect = 7.1e-12, P = 7.1e-12
Identities = 74/271 (27%), Positives = 116/271 (42%)
Query: 45 DKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQY 104
+ C T C++G C+ C C GF G C+ +L L V + +YL++ L Q
Sbjct: 1126 NSCEGTECQNGANCVDQGSRPVCQCLPGFGGPECE-KL-LSVNFVDRDTYLQFTDL--QN 1181
Query: 105 LSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGT-GAATLRSSN 163
++T+ E NGILLYNG D IA+ L +V ++D G+ ++ + S+
Sbjct: 1182 WPRANITLQVSTAEDNGILLYNGDN-----DHIAVELYQGHVRVSYDPGSYPSSAIYSAE 1236
Query: 164 PISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVP-DYNIVSP 222
I+ G++H + L + L +D + + G GG+P D N +
Sbjct: 1237 TINDGQFHTVELVTFDQMVNLSIDGGSPMTMDNFGKHYTLNSEAPLYVGGMPVDVNSAAF 1296
Query: 223 KV-KIKS--SFIGCIQKVLINNHELNILGEAIQGVNVVNCAHPCITQPCGSGSCVP-LYD 278
++ +I + SF GCI+ + INN EL + VV PC C G C P
Sbjct: 1297 RLWQILNGTSFHGCIRNLYINN-ELQDFTKTQMKPGVVPGCEPCRKLYCLHGICQPNATP 1355
Query: 279 GYKCVCTQSCKESHLTEVMCASFDHGASFLH 309
G C C H + + HG +H
Sbjct: 1356 GPVCHCEAGWGGLHCDQPVDGPC-HGHKCVH 1385
Score = 101 (40.6 bits), Expect = 2.3e-06, Sum P(3) = 2.3e-06
Identities = 20/49 (40%), Positives = 26/49 (53%)
Query: 37 GRSKECLEDKCNK--TPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLD 83
GR+ E L D C+ PC+H +C+ TP C C G+TGD C D
Sbjct: 1037 GRACEQLVDFCSPDLNPCQHEAQCVGTPEGPRCECVPGYTGDNCSKNQD 1085
Score = 99 (39.9 bits), Expect = 2.8e-07, Sum P(4) = 2.8e-07
Identities = 18/46 (39%), Positives = 24/46 (52%)
Query: 45 DKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQFN 90
D C K C +GG C+ G+ C CPL +TG C+ +D P N
Sbjct: 1007 DDCVKHDCVNGGVCVDGIGNYTCQCPLQYTGRACEQLVDFCSPDLN 1052
Score = 94 (38.1 bits), Expect = 9.4e-07, Sum P(4) = 9.4e-07
Identities = 20/51 (39%), Positives = 23/51 (45%)
Query: 36 KGRSKECLEDKCNKTPCEHGGKCITTPGSSY---CLCPLGFTGDLCQTRLD 83
KGR+ E D C+ PC +GG C G C CP GF G C D
Sbjct: 957 KGRNCEVSLDSCSSNPCGNGGTCHAQEGEDAGFTCSCPSGFEGLTCGMNTD 1007
Score = 89 (36.4 bits), Expect = 3.1e-06, Sum P(4) = 3.1e-06
Identities = 16/40 (40%), Positives = 21/40 (52%)
Query: 45 DKCNKTPCEHGGKCITTPGSSY-CLCPLGFTGDLCQTRLD 83
D C +PC++ G C P Y C CP G+ G C+ LD
Sbjct: 927 DPCLSSPCQNQGTCHNDPLEVYRCTCPSGYKGRNCEVSLD 966
Score = 87 (35.7 bits), Expect = 6.7e-05, Sum P(3) = 6.7e-05
Identities = 13/36 (36%), Positives = 21/36 (58%)
Query: 44 EDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQ 79
+D C C++G +C+ S CLC G++G LC+
Sbjct: 1084 QDDCKDHQCQNGAQCVDEINSYACLCAEGYSGQLCE 1119
Score = 76 (31.8 bits), Expect = 2.8e-07, Sum P(4) = 2.8e-07
Identities = 15/62 (24%), Positives = 31/62 (50%)
Query: 340 NIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGV 399
NI +++ T+ +G++L+ G + D +A+ ++ G+ V Y IN+G
Sbjct: 1186 NITLQVSTAEDNGILLYNGDN---DHIAVELYQGHVRVSYDPGSYPSSAIYSAETINDGQ 1242
Query: 400 WH 401
+H
Sbjct: 1243 FH 1244
Score = 67 (28.6 bits), Expect = 2.8e-07, Sum P(4) = 2.8e-07
Identities = 21/65 (32%), Positives = 32/65 (49%)
Query: 446 IRIDTDYSMQSISGGKFEQLNTDSGLYVGGVE-DIEELTRSKYH----HSFKGWISNLIL 500
+ ID M + GK LN+++ LYVGG+ D+ + SF G I NL +
Sbjct: 1257 LSIDGGSPMTMDNFGKHYTLNSEAPLYVGGMPVDVNSAAFRLWQILNGTSFHGCIRNLYI 1316
Query: 501 SNDYQ 505
+N+ Q
Sbjct: 1317 NNELQ 1321
Score = 53 (23.7 bits), Expect = 2.8e-07, Sum P(4) = 2.8e-07
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 249 EAIQGVNVVNCAH---PCITQPCGSGS-CVPLYDGYKCVCTQ 286
E + G NC+ C C +G+ CV + Y C+C +
Sbjct: 1070 ECVPGYTGDNCSKNQDDCKDHQCQNGAQCVDEINSYACLCAE 1111
Score = 51 (23.0 bits), Expect = 4.4e-07, Sum P(4) = 4.4e-07
Identities = 14/36 (38%), Positives = 16/36 (44%)
Query: 259 CAHP--CITQPCGSG-SCVPLYDGYKCVCTQS-CKE 290
C H C+ P G CVP Y G C Q CK+
Sbjct: 1054 CQHEAQCVGTPEGPRCECVPGYTGDNCSKNQDDCKD 1089
Score = 46 (21.3 bits), Expect = 1.5e-05, Sum P(4) = 1.5e-05
Identities = 9/26 (34%), Positives = 12/26 (46%)
Query: 263 CITQPCGSGSCVPLYDGYKCVCTQSC 288
C + PCG+G +G T SC
Sbjct: 968 CSSNPCGNGGTCHAQEGEDAGFTCSC 993
>UNIPROTKB|O88279 [details] [associations]
symbol:Slit1 "Slit homolog 1 protein" species:10116 "Rattus
norvegicus" [GO:0005509 "calcium ion binding" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 RGD:69307 GO:GO:0005737 GO:GO:0005615
GO:GO:0007420 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0008045 PROSITE:PS01186
GO:GO:0043395 InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274
SMART:SM00282 PROSITE:PS50025 GO:GO:0021510 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0040023 GO:GO:0031290
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 GO:GO:0048846 Pfam:PF12661 GO:GO:0033563 GO:GO:0051964
Pfam:PF01463 GO:GO:0022028 GO:GO:0050919 GO:GO:0048843 CTD:6585
HOGENOM:HOG000116120 HOVERGEN:HBG057959 KO:K06838 OrthoDB:EOG4VDPXM
EMBL:AB011530 EMBL:AF133730 EMBL:AB073213 EMBL:AB073214
EMBL:AB073215 EMBL:AB017170 IPI:IPI00389760 IPI:IPI00409983
IPI:IPI00409984 IPI:IPI00409985 PIR:T42218 RefSeq:NP_075242.1
UniGene:Rn.30002 ProteinModelPortal:O88279 SMR:O88279 STRING:O88279
PRIDE:O88279 GeneID:65047 KEGG:rno:65047 UCSC:RGD:69307
InParanoid:O88279 NextBio:613884 ArrayExpress:O88279
Genevestigator:O88279 GermOnline:ENSRNOG00000026065 Uniprot:O88279
Length = 1531
Score = 198 (74.8 bits), Expect = 7.1e-12, P = 7.1e-12
Identities = 74/271 (27%), Positives = 116/271 (42%)
Query: 45 DKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQY 104
+ C T C++G C+ C C GF G C+ +L L V + +YL++ L Q
Sbjct: 1126 NSCEGTECQNGANCVDQGSRPVCQCLPGFGGPECE-KL-LSVNFVDRDTYLQFTDL--QN 1181
Query: 105 LSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGT-GAATLRSSN 163
++T+ E NGILLYNG D IA+ L +V ++D G+ ++ + S+
Sbjct: 1182 WPRANITLQVSTAEDNGILLYNGDN-----DHIAVELYQGHVRVSYDPGSYPSSAIYSAE 1236
Query: 164 PISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVP-DYNIVSP 222
I+ G++H + L + L +D + + G GG+P D N +
Sbjct: 1237 TINDGQFHTVELVTFDQMVNLSIDGGSPMTMDNFGKHYTLNSEAPLYVGGMPVDVNSAAF 1296
Query: 223 KV-KIKS--SFIGCIQKVLINNHELNILGEAIQGVNVVNCAHPCITQPCGSGSCVP-LYD 278
++ +I + SF GCI+ + INN EL + VV PC C G C P
Sbjct: 1297 RLWQILNGTSFHGCIRNLYINN-ELQDFTKTQMKPGVVPGCEPCRKLYCLHGICQPNATP 1355
Query: 279 GYKCVCTQSCKESHLTEVMCASFDHGASFLH 309
G C C H + + HG +H
Sbjct: 1356 GPVCHCEAGWGGLHCDQPVDGPC-HGHKCVH 1385
Score = 101 (40.6 bits), Expect = 2.3e-06, Sum P(3) = 2.3e-06
Identities = 20/49 (40%), Positives = 26/49 (53%)
Query: 37 GRSKECLEDKCNK--TPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLD 83
GR+ E L D C+ PC+H +C+ TP C C G+TGD C D
Sbjct: 1037 GRACEQLVDFCSPDLNPCQHEAQCVGTPEGPRCECVPGYTGDNCSKNQD 1085
Score = 99 (39.9 bits), Expect = 2.8e-07, Sum P(4) = 2.8e-07
Identities = 18/46 (39%), Positives = 24/46 (52%)
Query: 45 DKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQFN 90
D C K C +GG C+ G+ C CPL +TG C+ +D P N
Sbjct: 1007 DDCVKHDCVNGGVCVDGIGNYTCQCPLQYTGRACEQLVDFCSPDLN 1052
Score = 94 (38.1 bits), Expect = 9.4e-07, Sum P(4) = 9.4e-07
Identities = 20/51 (39%), Positives = 23/51 (45%)
Query: 36 KGRSKECLEDKCNKTPCEHGGKCITTPGSSY---CLCPLGFTGDLCQTRLD 83
KGR+ E D C+ PC +GG C G C CP GF G C D
Sbjct: 957 KGRNCEVSLDSCSSNPCGNGGTCHAQEGEDAGFTCSCPSGFEGLTCGMNTD 1007
Score = 89 (36.4 bits), Expect = 3.1e-06, Sum P(4) = 3.1e-06
Identities = 16/40 (40%), Positives = 21/40 (52%)
Query: 45 DKCNKTPCEHGGKCITTPGSSY-CLCPLGFTGDLCQTRLD 83
D C +PC++ G C P Y C CP G+ G C+ LD
Sbjct: 927 DPCLSSPCQNQGTCHNDPLEVYRCTCPSGYKGRNCEVSLD 966
Score = 87 (35.7 bits), Expect = 6.7e-05, Sum P(3) = 6.7e-05
Identities = 13/36 (36%), Positives = 21/36 (58%)
Query: 44 EDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQ 79
+D C C++G +C+ S CLC G++G LC+
Sbjct: 1084 QDDCKDHQCQNGAQCVDEINSYACLCAEGYSGQLCE 1119
Score = 76 (31.8 bits), Expect = 2.8e-07, Sum P(4) = 2.8e-07
Identities = 15/62 (24%), Positives = 31/62 (50%)
Query: 340 NIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGV 399
NI +++ T+ +G++L+ G + D +A+ ++ G+ V Y IN+G
Sbjct: 1186 NITLQVSTAEDNGILLYNGDN---DHIAVELYQGHVRVSYDPGSYPSSAIYSAETINDGQ 1242
Query: 400 WH 401
+H
Sbjct: 1243 FH 1244
Score = 67 (28.6 bits), Expect = 2.8e-07, Sum P(4) = 2.8e-07
Identities = 21/65 (32%), Positives = 32/65 (49%)
Query: 446 IRIDTDYSMQSISGGKFEQLNTDSGLYVGGVE-DIEELTRSKYH----HSFKGWISNLIL 500
+ ID M + GK LN+++ LYVGG+ D+ + SF G I NL +
Sbjct: 1257 LSIDGGSPMTMDNFGKHYTLNSEAPLYVGGMPVDVNSAAFRLWQILNGTSFHGCIRNLYI 1316
Query: 501 SNDYQ 505
+N+ Q
Sbjct: 1317 NNELQ 1321
Score = 53 (23.7 bits), Expect = 2.8e-07, Sum P(4) = 2.8e-07
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 249 EAIQGVNVVNCAH---PCITQPCGSGS-CVPLYDGYKCVCTQ 286
E + G NC+ C C +G+ CV + Y C+C +
Sbjct: 1070 ECVPGYTGDNCSKNQDDCKDHQCQNGAQCVDEINSYACLCAE 1111
Score = 51 (23.0 bits), Expect = 4.4e-07, Sum P(4) = 4.4e-07
Identities = 14/36 (38%), Positives = 16/36 (44%)
Query: 259 CAHP--CITQPCGSG-SCVPLYDGYKCVCTQS-CKE 290
C H C+ P G CVP Y G C Q CK+
Sbjct: 1054 CQHEAQCVGTPEGPRCECVPGYTGDNCSKNQDDCKD 1089
Score = 46 (21.3 bits), Expect = 1.5e-05, Sum P(4) = 1.5e-05
Identities = 9/26 (34%), Positives = 12/26 (46%)
Query: 263 CITQPCGSGSCVPLYDGYKCVCTQSC 288
C + PCG+G +G T SC
Sbjct: 968 CSSNPCGNGGTCHAQEGEDAGFTCSC 993
>UNIPROTKB|F1PSS7 [details] [associations]
symbol:SLIT1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005576 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 Pfam:PF12661 Pfam:PF01463 GeneTree:ENSGT00700000104083
OMA:KCVHGKC EMBL:AAEX03015440 Ensembl:ENSCAFT00000014303
Uniprot:F1PSS7
Length = 1534
Score = 194 (73.4 bits), Expect = 7.5e-12, Sum P(2) = 7.5e-12
Identities = 69/244 (28%), Positives = 108/244 (44%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQYLS 106
C T C++G C+ C C GF G C+ +L L V + +YL++ L Q
Sbjct: 1131 CEGTECQNGANCVDQGSGPVCQCLPGFGGPECE-KL-LSVNFVDRDTYLQFTDL--QNWP 1186
Query: 107 LLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGT-GAATLRSSNPI 165
++T+ E NGILLYNG D +A+ L +V ++D G+ ++ + S+ I
Sbjct: 1187 RANITLQVSTAEDNGILLYNGDN-----DHMAVELYQGHVRVSYDPGSYPSSAIYSAETI 1241
Query: 166 SLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVP-DYNIVSPKV 224
+ G++H + L + L +D + + G GG+P D N + ++
Sbjct: 1242 NDGQFHTVELVTFDQMVNLSIDGGSPMTMDNFGKHYTLNSEAPLYVGGMPVDVNSAAFRL 1301
Query: 225 -KIKS--SFIGCIQKVLINNHELNILGEAIQGVNVVNCAHPCITQPCGSGSCVP-LYDGY 280
+I + SF GCI+ + INN EL + VV PC C G C P G
Sbjct: 1302 WQILNGTSFHGCIRNLYINN-ELQDFTKTRMKPGVVPGCEPCRKLYCLHGICQPNATPGP 1360
Query: 281 KCVC 284
C C
Sbjct: 1361 VCHC 1364
Score = 98 (39.6 bits), Expect = 1.7e-06, Sum P(4) = 1.7e-06
Identities = 20/51 (39%), Positives = 24/51 (47%)
Query: 36 KGRSKECLEDKCNKTPCEHGGKCITTPGSSY---CLCPLGFTGDLCQTRLD 83
KGR E D C+ +PC +GG C G C CP GF G C+ D
Sbjct: 957 KGRDCEVSLDGCSSSPCGNGGTCRPQEGGDAGFTCSCPPGFEGPTCEVNTD 1007
Score = 98 (39.6 bits), Expect = 4.8e-06, Sum P(3) = 4.8e-06
Identities = 19/49 (38%), Positives = 24/49 (48%)
Query: 37 GRSKECLEDKCNK--TPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLD 83
GR E L D C+ PC+H +C+ TP C C G+ GD C D
Sbjct: 1037 GRGCEQLVDFCSSDLNPCQHEAQCVGTPDGPRCECAPGYVGDNCSENQD 1085
Score = 90 (36.7 bits), Expect = 3.3e-05, Sum P(3) = 3.3e-05
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 44 EDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQ 79
+D C C+HG +C+ S CLC G++G C+
Sbjct: 1084 QDDCRDHRCQHGAQCVDEVNSYSCLCAEGYSGQFCE 1119
Score = 88 (36.0 bits), Expect = 1.9e-05, Sum P(4) = 1.9e-05
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 36 KGRSKECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLD 83
+G + E D C + C +GG C+ G+ C CPL +TG C+ +D
Sbjct: 998 EGPTCEVNTDDCVEHTCANGGICVDGVGNYTCQCPLQYTGRGCEQLVD 1045
Score = 80 (33.2 bits), Expect = 8.0e-05, Sum P(4) = 8.0e-05
Identities = 15/40 (37%), Positives = 20/40 (50%)
Query: 45 DKCNKTPCEHGGKCITTPGSSY-CLCPLGFTGDLCQTRLD 83
D C +PC + G C P Y C+C G+ G C+ LD
Sbjct: 927 DPCLSSPCRNQGTCHNDPLEVYRCVCSSGYKGRDCEVSLD 966
Score = 76 (31.8 bits), Expect = 1.7e-06, Sum P(4) = 1.7e-06
Identities = 15/62 (24%), Positives = 31/62 (50%)
Query: 340 NIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGV 399
NI +++ T+ +G++L+ G + D +A+ ++ G+ V Y IN+G
Sbjct: 1189 NITLQVSTAEDNGILLYNGDN---DHMAVELYQGHVRVSYDPGSYPSSAIYSAETINDGQ 1245
Query: 400 WH 401
+H
Sbjct: 1246 FH 1247
Score = 67 (28.6 bits), Expect = 1.7e-06, Sum P(4) = 1.7e-06
Identities = 21/65 (32%), Positives = 32/65 (49%)
Query: 446 IRIDTDYSMQSISGGKFEQLNTDSGLYVGGVE-DIEELTRSKYH----HSFKGWISNLIL 500
+ ID M + GK LN+++ LYVGG+ D+ + SF G I NL +
Sbjct: 1260 LSIDGGSPMTMDNFGKHYTLNSEAPLYVGGMPVDVNSAAFRLWQILNGTSFHGCIRNLYI 1319
Query: 501 SNDYQ 505
+N+ Q
Sbjct: 1320 NNELQ 1324
Score = 54 (24.1 bits), Expect = 7.5e-12, Sum P(2) = 7.5e-12
Identities = 11/24 (45%), Positives = 11/24 (45%)
Query: 262 PCITQPCGSGSCVPLYD-GYKCVC 284
PC C G CVPL Y C C
Sbjct: 1380 PCHGHKCVHGKCVPLDALSYSCQC 1403
Score = 48 (22.0 bits), Expect = 8.0e-05, Sum P(4) = 8.0e-05
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 263 CITQPCGSG-SCVPLYDG---YKCVC 284
C + PCG+G +C P G + C C
Sbjct: 968 CSSSPCGNGGTCRPQEGGDAGFTCSC 993
Score = 46 (21.3 bits), Expect = 1.7e-06, Sum P(4) = 1.7e-06
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 258 NCAH---PCITQPCGSGS-CVPLYDGYKCVCTQ 286
NC+ C C G+ CV + Y C+C +
Sbjct: 1079 NCSENQDDCRDHRCQHGAQCVDEVNSYSCLCAE 1111
Score = 40 (19.1 bits), Expect = 6.6e-06, Sum P(4) = 6.6e-06
Identities = 11/38 (28%), Positives = 14/38 (36%)
Query: 267 PCG-SGSCVPLYDGYKCVCTQSCKESHLTEVMCASFDH 303
PC CV DG +C C + +E DH
Sbjct: 1053 PCQHEAQCVGTPDGPRCECAPGYVGDNCSENQDDCRDH 1090
>UNIPROTKB|F1S5C4 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090288 "negative regulation of cellular response to
growth factor stimulus" evidence=IEA] [GO:0090260 "negative
regulation of retinal ganglion cell axon guidance" evidence=IEA]
[GO:0090024 "negative regulation of neutrophil chemotaxis"
evidence=IEA] [GO:0071676 "negative regulation of mononuclear cell
migration" evidence=IEA] [GO:0071672 "negative regulation of smooth
muscle cell chemotaxis" evidence=IEA] [GO:0071504 "cellular
response to heparin" evidence=IEA] [GO:0070100 "negative regulation
of chemokine-mediated signaling pathway" evidence=IEA] [GO:0061364
"apoptotic process involved in luteolysis" evidence=IEA]
[GO:0060763 "mammary duct terminal end bud growth" evidence=IEA]
[GO:0051414 "response to cortisol stimulus" evidence=IEA]
[GO:0051058 "negative regulation of small GTPase mediated signal
transduction" evidence=IEA] [GO:0050929 "induction of negative
chemotaxis" evidence=IEA] [GO:0048846 "axon extension involved in
axon guidance" evidence=IEA] [GO:0048754 "branching morphogenesis
of an epithelial tube" evidence=IEA] [GO:0048495 "Roundabout
binding" evidence=IEA] [GO:0045499 "chemorepellent activity"
evidence=IEA] [GO:0043394 "proteoglycan binding" evidence=IEA]
[GO:0043237 "laminin-1 binding" evidence=IEA] [GO:0043116 "negative
regulation of vascular permeability" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0033563 "dorsal/ventral axon guidance" evidence=IEA]
[GO:0032870 "cellular response to hormone stimulus" evidence=IEA]
[GO:0031290 "retinal ganglion cell axon guidance" evidence=IEA]
[GO:0030837 "negative regulation of actin filament polymerization"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0021972 "corticospinal neuron axon guidance
through spinal cord" evidence=IEA] [GO:0021836 "chemorepulsion
involved in postnatal olfactory bulb interneuron migration"
evidence=IEA] [GO:0016337 "cell-cell adhesion" evidence=IEA]
[GO:0010629 "negative regulation of gene expression" evidence=IEA]
[GO:0010596 "negative regulation of endothelial cell migration"
evidence=IEA] [GO:0010593 "negative regulation of lamellipodium
assembly" evidence=IEA] [GO:0009986 "cell surface" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0008201 "heparin binding" evidence=IEA]
[GO:0008045 "motor neuron axon guidance" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005615 "extracellular space"
evidence=IEA] [GO:0005095 "GTPase inhibitor activity" evidence=IEA]
[GO:0002042 "cell migration involved in sprouting angiogenesis"
evidence=IEA] [GO:0001933 "negative regulation of protein
phosphorylation" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001657 "ureteric bud development"
evidence=IEA] [GO:0001656 "metanephros development" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005737 GO:GO:0008285 GO:GO:0005615 GO:GO:0009986
GO:GO:0030308 GO:GO:0001701 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0008201 GO:GO:0005509
GO:GO:0043116 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0043065 GO:GO:0008045 GO:GO:0071504
GO:GO:0005095 GO:GO:0016337 PROSITE:PS01186 GO:GO:0032870
GO:GO:0030837 GO:GO:0010629 InterPro:IPR003645 InterPro:IPR001791
Pfam:PF00054 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 GO:GO:0071672 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0001656 GO:GO:0010596 GO:GO:0001657
GO:GO:0001933 GO:GO:0048754 GO:GO:0071676 GO:GO:0031290
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
GO:GO:0048846 GO:GO:0060763 GO:GO:0070100 GO:GO:0090288
GO:GO:0033563 GO:GO:0045499 GO:GO:0002042 Pfam:PF01463
GO:GO:0010593 GO:GO:0051414 GeneTree:ENSGT00700000104083
GO:GO:0090260 GO:GO:0021836 GO:GO:0061364 GO:GO:0021972
GO:GO:0050929 GO:GO:0090024 GO:GO:0051058 EMBL:CU929485
Ensembl:ENSSSCT00000009572 OMA:XVETIND Uniprot:F1S5C4
Length = 1045
Score = 187 (70.9 bits), Expect = 8.2e-12, Sum P(2) = 8.2e-12
Identities = 64/247 (25%), Positives = 107/247 (43%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQYLS 106
C+ C++G +CI C C G+ G+ C+ +L + V N SYL+ +
Sbjct: 640 CDNFDCQNGAQCIIRLNEPICQCLPGYQGEKCE-KL-VSVNFVNKESYLQIPSA--KVRP 695
Query: 107 LLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTG-AATLRSSNPI 165
++T+ E +GILLY G + D IA+ L V ++D G+ A+ + S I
Sbjct: 696 QTNITLQIATDEDSGILLYKGDK-----DHIAVELYRGRVRASYDTGSHPASAIYSVETI 750
Query: 166 SLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSPKVK 225
+ G +H + L + L VD I + + GG+P N V+ ++
Sbjct: 751 NDGNFHIVELLALDQSLSLSVDGGSPKIITNLSKQSTLNFDSPLYVGGMPGKNNVAAALR 810
Query: 226 IK-----SSFIGCIQKVLINNHELNILGEAIQGVNVVNCAHPCITQPCGSGSCVPL-YDG 279
+SF GCI+ + IN+ EL + ++ PC + C G+C P G
Sbjct: 811 QAPGHNGTSFHGCIRNLYINS-ELQDFRKVPMQTGILPGCEPCHKKVCAHGTCQPSSQSG 869
Query: 280 YKCVCTQ 286
+ C C +
Sbjct: 870 FTCECEE 876
Score = 106 (42.4 bits), Expect = 6.3e-06, Sum P(3) = 6.3e-06
Identities = 21/65 (32%), Positives = 30/65 (46%)
Query: 26 WIQLNDGNKIKGRSKECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQ 85
W DG +G + E D C CE+ C+ + CLCP +TG+LC+ +LD
Sbjct: 496 WCICADG--FEGENCEINVDDCEDNDCENNSTCVDGINNYTCLCPPEYTGELCEEKLDFC 553
Query: 86 VPQFN 90
N
Sbjct: 554 AQDLN 558
Score = 77 (32.2 bits), Expect = 6.3e-06, Sum P(3) = 6.3e-06
Identities = 24/96 (25%), Positives = 42/96 (43%)
Query: 340 NIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGV 399
NI ++I T SG++L+ G KD +A+ ++ G Y IN+G
Sbjct: 698 NITLQIATDEDSGILLYKGD---KDHIAVELYRGRVRASYDTGSHPASAIYSVETINDGN 754
Query: 400 WH---RLTVHRNFMVVMHGSSH---TRSNKSSKIEF 429
+H L + ++ + + G S T +K S + F
Sbjct: 755 FHIVELLALDQSLSLSVDGGSPKIITNLSKQSTLNF 790
Score = 69 (29.3 bits), Expect = 3.9e-05, Sum P(3) = 3.9e-05
Identities = 31/105 (29%), Positives = 45/105 (42%)
Query: 445 LIRIDTDYSMQSISGG---------KFEQLNTDSGLYVGGV---EDIEELTRSKYHH--- 489
L+ +D S+ S+ GG K LN DS LYVGG+ ++ R H
Sbjct: 760 LLALDQSLSL-SVDGGSPKIITNLSKQSTLNFDSPLYVGGMPGKNNVAAALRQAPGHNGT 818
Query: 490 SFKGWISNLILSNDYQV--KLPLSRSQGSSCQLTCETLNTGQVTC 532
SF G I NL ++++ Q K+P+ C+ C TC
Sbjct: 819 SFHGCIRNLYINSELQDFRKVPMQTGILPGCE-PCHKKVCAHGTC 862
Score = 57 (25.1 bits), Expect = 8.2e-12, Sum P(2) = 8.2e-12
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 262 PCITQPCGSGSCVPLYD-GYKCVCTQ 286
PC+ C G+C+P+ Y C C +
Sbjct: 890 PCLGNKCVHGTCLPINAFSYSCKCLE 915
Score = 51 (23.0 bits), Expect = 6.3e-06, Sum P(3) = 6.3e-06
Identities = 8/25 (32%), Positives = 13/25 (52%)
Query: 263 CITQPCGSGS-CVPLYDGYKCVCTQ 286
C C +G+ C +GY C+C +
Sbjct: 595 CQDNKCKNGAHCTDAVNGYTCICPE 619
>UNIPROTKB|Q5T0V0 [details] [associations]
symbol:SLIT1 "Slit homolog 1 protein" species:9606 "Homo
sapiens" [GO:0005509 "calcium ion binding" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186
InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR025875 Pfam:PF12799 Pfam:PF02210
Pfam:PF12661 Pfam:PF01463 EMBL:AL442123 EMBL:AL512424
IPI:IPI00871419 UniGene:Hs.632082 HGNC:HGNC:11085
HOGENOM:HOG000116120 HOVERGEN:HBG057959 ChiTaRS:SLIT1 SMR:Q5T0V0
STRING:Q5T0V0 Ensembl:ENST00000371070 Uniprot:Q5T0V0
Length = 1461
Score = 193 (73.0 bits), Expect = 8.5e-12, Sum P(2) = 8.5e-12
Identities = 69/244 (28%), Positives = 107/244 (43%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQYLS 106
C T C++G C+ C C GF G C+ +L L V + +YL++ L Q
Sbjct: 1131 CEGTECQNGANCVDQGNRPVCQCLPGFGGPECE-KL-LSVNFVDRDTYLQFTDL--QNWP 1186
Query: 107 LLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGT-GAATLRSSNPI 165
++T+ E NGILLYNG D IA+ L +V ++D G+ ++ + S+ I
Sbjct: 1187 RANITLQVSTAEDNGILLYNGDN-----DHIAVELYQGHVRVSYDPGSYPSSAIYSAETI 1241
Query: 166 SLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVP-DYNIVSPKV 224
+ G++H + L + L +D + + G GG+P D N + ++
Sbjct: 1242 NDGQFHTVELVAFDQMVNLSIDGGSPMTMDNFGKHYTLNSEAPLYVGGMPVDVNSAAFRL 1301
Query: 225 -KIKSS--FIGCIQKVLINNHELNILGEAIQGVNVVNCAHPCITQPCGSGSCVP-LYDGY 280
+I + F GCI+ + INN EL + VV PC C G C P G
Sbjct: 1302 WQILNGTGFHGCIRNLYINN-ELQDFTKTQMKPGVVPGCEPCRKLYCLHGICQPNATPGP 1360
Query: 281 KCVC 284
C C
Sbjct: 1361 MCHC 1364
Score = 104 (41.7 bits), Expect = 6.6e-07, Sum P(4) = 6.6e-07
Identities = 29/86 (33%), Positives = 34/86 (39%)
Query: 36 KGRSKECLEDKCNKTPCEHGGKCITTPGSSY---CLCPLGFTGDLCQTRLDLQVPQFNGS 92
KGR E D C+ PCE+GG C G C CP GF G C D V +
Sbjct: 957 KGRDCEVSLDSCSSGPCENGGTCHAQEGEDAPFTCSCPTGFEGPTCGVNTDDCVDHACAN 1016
Query: 93 SYLRYQGLGEQYLSLLDLTIVFKAIE 118
+ G+G Y L KA E
Sbjct: 1017 GGVCVDGVGN-YTCQCPLQYEGKACE 1041
Score = 96 (38.9 bits), Expect = 1.6e-05, Sum P(3) = 1.6e-05
Identities = 18/50 (36%), Positives = 26/50 (52%)
Query: 36 KGRSKECLEDKCNK--TPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLD 83
+G++ E L D C+ PC+H +C+ TP C C G+ GD C D
Sbjct: 1036 EGKACEQLVDLCSPDLNPCQHEAQCVGTPDGPRCECMPGYAGDNCSENQD 1085
Score = 94 (38.1 bits), Expect = 7.2e-06, Sum P(4) = 7.2e-06
Identities = 17/46 (36%), Positives = 23/46 (50%)
Query: 45 DKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQFN 90
D C C +GG C+ G+ C CPL + G C+ +DL P N
Sbjct: 1007 DDCVDHACANGGVCVDGVGNYTCQCPLQYEGKACEQLVDLCSPDLN 1052
Score = 89 (36.4 bits), Expect = 8.9e-05, Sum P(3) = 8.9e-05
Identities = 15/45 (33%), Positives = 24/45 (53%)
Query: 44 EDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQ 88
+D C C++G +C+ S CLC G++G LC+ L P+
Sbjct: 1084 QDDCRDHRCQNGAQCMDEVNSYSCLCAEGYSGQLCEIPPHLPAPK 1128
Score = 87 (35.7 bits), Expect = 3.8e-05, Sum P(4) = 3.8e-05
Identities = 16/40 (40%), Positives = 21/40 (52%)
Query: 45 DKCNKTPCEHGGKCITTPGSSY-CLCPLGFTGDLCQTRLD 83
D C +PC++ G C P Y C CP G+ G C+ LD
Sbjct: 927 DLCLSSPCQNQGTCHNDPLEVYRCACPSGYKGRDCEVSLD 966
Score = 76 (31.8 bits), Expect = 6.6e-07, Sum P(4) = 6.6e-07
Identities = 15/62 (24%), Positives = 31/62 (50%)
Query: 340 NIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGV 399
NI +++ T+ +G++L+ G + D +A+ ++ G+ V Y IN+G
Sbjct: 1189 NITLQVSTAEDNGILLYNGDN---DHIAVELYQGHVRVSYDPGSYPSSAIYSAETINDGQ 1245
Query: 400 WH 401
+H
Sbjct: 1246 FH 1247
Score = 63 (27.2 bits), Expect = 6.6e-07, Sum P(4) = 6.6e-07
Identities = 20/65 (30%), Positives = 31/65 (47%)
Query: 446 IRIDTDYSMQSISGGKFEQLNTDSGLYVGGVE-DIEELTRSKYH----HSFKGWISNLIL 500
+ ID M + GK LN+++ LYVGG+ D+ + F G I NL +
Sbjct: 1260 LSIDGGSPMTMDNFGKHYTLNSEAPLYVGGMPVDVNSAAFRLWQILNGTGFHGCIRNLYI 1319
Query: 501 SNDYQ 505
+N+ Q
Sbjct: 1320 NNELQ 1324
Score = 54 (24.1 bits), Expect = 8.5e-12, Sum P(2) = 8.5e-12
Identities = 11/24 (45%), Positives = 11/24 (45%)
Query: 262 PCITQPCGSGSCVPLYD-GYKCVC 284
PC C G CVPL Y C C
Sbjct: 1380 PCHGHKCVHGQCVPLDALSYSCQC 1403
Score = 47 (21.6 bits), Expect = 6.6e-07, Sum P(4) = 6.6e-07
Identities = 11/42 (26%), Positives = 19/42 (45%)
Query: 249 EAIQGVNVVNCAH---PCITQPCGSGS-CVPLYDGYKCVCTQ 286
E + G NC+ C C +G+ C+ + Y C+C +
Sbjct: 1070 ECMPGYAGDNCSENQDDCRDHRCQNGAQCMDEVNSYSCLCAE 1111
Score = 42 (19.8 bits), Expect = 2.0e-06, Sum P(4) = 2.0e-06
Identities = 15/57 (26%), Positives = 23/57 (40%)
Query: 248 GEAIQGVNVVNCAHPCITQPCG-SGSCVPLYDGYKCVCTQSCKESHLTEVMCASFDH 303
G+A + +V+ P + PC CV DG +C C + +E DH
Sbjct: 1037 GKACE--QLVDLCSPDLN-PCQHEAQCVGTPDGPRCECMPGYAGDNCSENQDDCRDH 1090
Score = 37 (18.1 bits), Expect = 0.00034, Sum P(4) = 0.00034
Identities = 8/26 (30%), Positives = 11/26 (42%)
Query: 263 CITQPCGSGSCVPLYDGYKCVCTQSC 288
C + PC +G +G T SC
Sbjct: 968 CSSGPCENGGTCHAQEGEDAPFTCSC 993
>UNIPROTKB|Q28146 [details] [associations]
symbol:NRXN1 "Neurexin-1" species:9913 "Bos taurus"
[GO:0097109 "neuroligin family protein binding" evidence=IPI]
[GO:0042734 "presynaptic membrane" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0090129 "positive regulation of synapse
maturation" evidence=IEA] [GO:0051965 "positive regulation of
synapse assembly" evidence=IEA] [GO:0007416 "synapse assembly"
evidence=IEA] [GO:0007269 "neurotransmitter secretion"
evidence=IEA] InterPro:IPR000742 InterPro:IPR027158 PROSITE:PS50026
SMART:SM00181 InterPro:IPR000152 GO:GO:0016021 GO:GO:0005886
GO:GO:0046872 GO:GO:0030054 GO:GO:0007155 GO:GO:0042734
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186
InterPro:IPR001791 SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025
Pfam:PF02210 InterPro:IPR003585 SMART:SM00294 eggNOG:NOG302266
HOGENOM:HOG000230481 HOVERGEN:HBG052670 KO:K07377 OrthoDB:EOG41G339
PANTHER:PTHR10127:SF309 EMBL:L14855 IPI:IPI00691987 IPI:IPI00694649
IPI:IPI00699150 IPI:IPI00702399 IPI:IPI00704131 IPI:IPI00707999
IPI:IPI00708029 IPI:IPI00709925 IPI:IPI00711380 IPI:IPI00713374
IPI:IPI00714819 IPI:IPI00716804 PIR:I45944 RefSeq:NP_776829.1
UniGene:Bt.5497 PDB:2H0B PDB:2R16 PDB:3ASI PDB:3POY PDB:3QCW
PDB:3R05 PDBsum:2H0B PDBsum:2R16 PDBsum:3ASI PDBsum:3POY
PDBsum:3QCW PDBsum:3R05 ProteinModelPortal:Q28146 SMR:Q28146
DIP:DIP-59135N STRING:Q28146 PRIDE:Q28146 GeneID:281950
KEGG:bta:281950 CTD:9378 InParanoid:Q28146 EvolutionaryTrace:Q28146
NextBio:20805826 Uniprot:Q28146
Length = 1530
Score = 200 (75.5 bits), Expect = 8.7e-12, Sum P(2) = 8.7e-12
Identities = 84/322 (26%), Positives = 137/322 (42%)
Query: 92 SSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFD 151
SSY+ L + Y S+ L FK +G++LYN DG DFI + L Y+ + FD
Sbjct: 936 SSYVALATL-QAYTSM-HLFFQFKTTSLDGLILYNS--GDG-NDFIVVELVKGYLHYVFD 990
Query: 152 LGTGAATLR-SSN-PISLGEWHKLRLTRTGRHAY-LQVDRFPSSQILSPGPFTQXXXXXX 208
LG GA ++ SSN P++ +WH + ++R + + +++D ++QI +
Sbjct: 991 LGNGANLIKGSSNKPLNDNQWHNVMISRDTSNLHTVKIDTKITTQITAGA--RNLDLKSD 1048
Query: 209 XXXGGVPDYNIVS-PK-VKIKSSFIGCIQKVLINNHELNILGEAI--QGVNVVNCAHP-- 262
GGV S PK V K F GC+ V +N +++ +A+ G C P
Sbjct: 1049 LYIGGVAKETYKSLPKLVHAKEGFQGCLASVDLNGRLPDLISDALFCNGQIERGCEGPST 1108
Query: 263 -CITQPCGS-GSCVPLYDGYKCVCTQSCKESHLTEVMCASFDHGASFLHYLDPEIIHSSG 320
C C + G C+ +DG C C+ + L C D G +++ G
Sbjct: 1109 TCQEDSCSNQGVCLQQWDGISCDCSMTSFSGPL----CN--DPGTTYI------FSKGGG 1156
Query: 321 LLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSK-DFLALGIHNGYAHVMY 379
+ YK+ + D T + + + T +++ SS D+L L IH G V +
Sbjct: 1157 QITYKWPPN-DRPSTRAD-RLAIGFSTVQKEAVLVRVDSSSGLGDYLELHIHQGKIGVKF 1214
Query: 380 XXXXXXXXXXXXQTKINNGVWH 401
IN+G +H
Sbjct: 1215 NVGTDDIAIEESNAIINDGKYH 1236
Score = 146 (56.5 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 43/159 (27%), Positives = 76/159 (47%)
Query: 36 KGRSKECLEDKCNKTPCEHGGKCITTPGSSYCLCPL-GFTGDLCQTRLDLQVPQFNGSSY 94
+G S C ED C+ G C+ C C + F+G LC + G
Sbjct: 1104 EGPSTTCQEDSCSNQ-----GVCLQQWDGISCDCSMTSFSGPLCNDPGTTYIFS-KGGGQ 1157
Query: 95 LRYQGL-GEQYLSLLD-LTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDL 152
+ Y+ ++ + D L I F ++ +L+ + G+GD++ L+++ + F++
Sbjct: 1158 ITYKWPPNDRPSTRADRLAIGFSTVQKEAVLV-RVDSSSGLGDYLELHIHQGKIGVKFNV 1216
Query: 153 GTGAATLRSSNPI-SLGEWHKLRLTRTGRHAYLQVDRFP 190
GT + SN I + G++H +R TR+G +A LQVD +P
Sbjct: 1217 GTDDIAIEESNAIINDGKYHVVRFTRSGGNATLQVDSWP 1255
Score = 133 (51.9 bits), Expect = 7.1e-11, Sum P(4) = 7.1e-11
Identities = 62/279 (22%), Positives = 116/279 (41%)
Query: 114 FKAIEPNGILLYN-G---HRADGVG------DFIALYLNDRYVDFTFDLGTGAATLRS-S 162
F+ EPNG++L++ G H+ D DF A+ + D ++ D+G+G +++
Sbjct: 531 FRTTEPNGLILFSHGKPRHQKDAKHPQMIKVDFFAIEMLDGHLYLLLDMGSGTIKIKALQ 590
Query: 163 NPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYN--IV 220
++ GEW+ + R GR + V+ + +PG GG+P+ +V
Sbjct: 591 KKVNDGEWYHVDFQRDGRSGTISVNTL-RTPYTAPGESQILDLDDELYLGGLPENKAGLV 649
Query: 221 SPK----VKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNCAHPCITQPCGSGSCVPL 276
P + ++GCI+ + I+ +I Q V + A + C + P
Sbjct: 650 FPTEVWTALLNYGYVGCIRDLFIDGQSKDIR----QMAEVQSTAG--VKPSCSRETAKPC 703
Query: 277 YDGYKCVCTQSCKESHLTEVM-CASFDH-GASFLHYLDPEIIHSSGLLHYKFQLHVDFRI 334
C C++ V C+ + G S + ++ G + K QL V
Sbjct: 704 LSN-PCKNNGMCRDGWNRYVCDCSGTGYLGRSCER--EATVLSYDGSMFMKIQLPVVMH- 759
Query: 335 TGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNG 373
T E ++ +R ++ + G+++ T S S D L L + G
Sbjct: 760 TEAE-DVSLRFRSQRAYGILMATTSRDSADTLRLELDAG 797
Score = 120 (47.3 bits), Expect = 1.7e-09, Sum P(4) = 1.7e-09
Identities = 44/180 (24%), Positives = 80/180 (44%)
Query: 86 VPQFNGSSYLRYQGLGEQYLSLLD-LTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDR 144
+ F GS Y Y S D +T+ FK ++ NG++L+ G AD ++ L L +
Sbjct: 299 IATFKGSEYFCYDLSQNPIQSSSDEITLSFKTLQRNGLMLHTGKSAD----YVNLALKNG 354
Query: 145 YVDFTFDLGTGA--ATLRSSN-PISLGEWHKLRLTRTGR------HAY---------LQV 186
V +LG+GA A + N + WH +++TR R HA + V
Sbjct: 355 AVSLVINLGSGAFEALVEPVNGKFNDNAWHDVKVTRNLRQTSGIGHAMVNKLHCSVTISV 414
Query: 187 DRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNI 246
D ++ + +T GG P + P + ++F+GC+++V+ N+++ +
Sbjct: 415 DGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADL-PGSPVSNNFMGCLKEVVYKNNDVRL 473
Score = 116 (45.9 bits), Expect = 1.5e-08, Sum P(3) = 1.5e-08
Identities = 49/204 (24%), Positives = 84/204 (41%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCP-LGFTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQYL 105
C PC++ G C C C G+ G C+ + V ++GS +++ Q +
Sbjct: 703 CLSNPCKNNGMCRDGWNRYVCDCSGTGYLGRSCER--EATVLSYDGSMFMKIQLPVVMHT 760
Query: 106 SLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDL---------GTGA 156
D+++ F++ GIL+ R D D + L L+ V T +L G
Sbjct: 761 EAEDVSLRFRSQRAYGILMATTSR-DSA-DTLRLELDAGRVKLTVNLDCIRINCNSSKGP 818
Query: 157 ATLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPD 216
TL + ++ EWH +R+ R G+ L VD + G T+ G + +
Sbjct: 819 ETLFAGYNLNDNEWHTVRVVRRGKSLKLTVDDQQAMTGQMAGDHTRLEFHNIET-GIITE 877
Query: 217 YNIVSPKVKIKSSFIGCIQKVLIN 240
+S + S+FIG +Q + N
Sbjct: 878 RRYLS---SVPSNFIGHLQSLTFN 898
Score = 89 (36.4 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 42/195 (21%), Positives = 75/195 (38%)
Query: 56 GKCITTPGSSYCLC-PLGFTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQYLSLLDLTIVF 114
G + G + LC L G + L+ P G + R+ S +++
Sbjct: 2 GTALLQRGGCFLLCLSLLLLGCWAELGSGLEFPGAEGQ-WTRFPKWNACCES--EMSFQL 58
Query: 115 KAIEPNGILLYNGHRADGVGDFIALYLN-DRYVDFTFDLGTGA-ATLRSSNPISLGEWHK 172
K G++LY +G DF+ L L + +F + ATL + P++ G WH
Sbjct: 59 KTRSARGLVLYFDD--EGFCDFLELILTRGGRLQLSFSIFCAEPATLLTDTPVNDGAWHN 116
Query: 173 LRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPD------YNIVSPKVKI 226
+R+ R R+ L +D+ + + GG+P + V+
Sbjct: 117 VRIRRQFRNTTLFIDQVEAKWVEVKSKRRDMTVFSGLFVGGLPPELRAAALKLTLASVRE 176
Query: 227 KSSFIGCIQKVLINN 241
+ F G I+ V +N+
Sbjct: 177 REPFKGWIRDVRVNS 191
Score = 84 (34.6 bits), Expect = 7.1e-11, Sum P(4) = 7.1e-11
Identities = 18/66 (27%), Positives = 31/66 (46%)
Query: 344 RIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTK-INNGVWHR 402
+ KT+S GLIL+ S DF+ + + GY H ++ K +N+ WH
Sbjct: 955 QFKTTSLDGLILYN-SGDGNDFIVVELVKGYLHYVFDLGNGANLIKGSSNKPLNDNQWHN 1013
Query: 403 LTVHRN 408
+ + R+
Sbjct: 1014 VMISRD 1019
Score = 80 (33.2 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 24/85 (28%), Positives = 35/85 (41%)
Query: 341 IDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQT--KINNG 398
I + KT +GL+L TG +S D++ L + NG ++ K N+
Sbjct: 324 ITLSFKTLQRNGLMLHTG--KSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDN 381
Query: 399 VWHRLTVHRNFMVVMHGSSHTRSNK 423
WH + V RN G H NK
Sbjct: 382 AWHDVKVTRNLRQTS-GIGHAMVNK 405
Score = 69 (29.3 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 19/71 (26%), Positives = 32/71 (45%)
Query: 444 CLIRIDTD--YSMQSISGGKFEQLNTDSGLYVGGVEDIEELTRSKYHHSFKGWISNLILS 501
C + I D + + + L +D YVGG +L S ++F G + ++
Sbjct: 408 CSVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGCLKEVVYK 467
Query: 502 NDYQVKLPLSR 512
N+ V+L LSR
Sbjct: 468 NN-DVRLELSR 477
Score = 65 (27.9 bits), Expect = 7.1e-11, Sum P(4) = 7.1e-11
Identities = 25/88 (28%), Positives = 38/88 (43%)
Query: 446 IRIDTDYSMQSISGGKFEQLNTDSGLYVGGVEDIEELTRSKYHHSFKGWISNLILSNDYQ 505
++IDT + Q +G + L+ S LY+GGV + K H+ +G+ + S D
Sbjct: 1026 VKIDTKITTQITAGAR--NLDLKSDLYIGGVAKETYKSLPKLVHAKEGF-QGCLASVDLN 1082
Query: 506 VKLPLSRSQGSSCQLTCETLNTG-QVTC 532
+LP S C E G TC
Sbjct: 1083 GRLPDLISDALFCNGQIERGCEGPSTTC 1110
Score = 58 (25.5 bits), Expect = 6.0e-07, Sum P(4) = 6.0e-07
Identities = 10/45 (22%), Positives = 22/45 (48%)
Query: 364 DFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGVWHRLTVHRN 408
DF A+ + +G+ +++ Q K+N+G W+ + R+
Sbjct: 562 DFFAIEMLDGHLYLLLDMGSGTIKIKALQKKVNDGEWYHVDFQRD 606
Score = 47 (21.6 bits), Expect = 8.7e-12, Sum P(2) = 8.7e-12
Identities = 14/54 (25%), Positives = 21/54 (38%)
Query: 27 IQLNDGNKIKGRSKEC-LEDKCNKTPCEHGGKCITTPGSSYCLCP-LGFTGDLC 78
++L+D G C ++ C +GG C + C C GF G C
Sbjct: 202 VKLDDEPPNSGGGSPCEAGEEGEGGVCLNGGVCSVVDDQAVCDCSRTGFRGKDC 255
Score = 41 (19.5 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 8/28 (28%), Positives = 16/28 (57%)
Query: 11 DDWNTVRVFRHRWDAWIQLNDGNKIKGR 38
++W+TVRV R + ++D + G+
Sbjct: 830 NEWHTVRVVRRGKSLKLTVDDQQAMTGQ 857
>UNIPROTKB|Q63372 [details] [associations]
symbol:Nrxn1 "Neurexin-1" species:10116 "Rattus norvegicus"
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0007269 "neurotransmitter secretion"
evidence=IEA] [GO:0007612 "learning" evidence=ISS] [GO:0009986
"cell surface" evidence=ISS] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0030534
"adult behavior" evidence=ISS] [GO:0042734 "presynaptic membrane"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0050839 "cell adhesion molecule binding" evidence=ISS]
[GO:0050885 "neuromuscular process controlling balance"
evidence=ISS] [GO:0051965 "positive regulation of synapse assembly"
evidence=IEA] [GO:0051968 "positive regulation of synaptic
transmission, glutamatergic" evidence=ISS] [GO:0060134 "prepulse
inhibition" evidence=ISS] [GO:0090129 "positive regulation of
synapse maturation" evidence=IEA] [GO:0097104 "postsynaptic
membrane assembly" evidence=ISS] [GO:0097109 "neuroligin family
protein binding" evidence=ISS] [GO:0097116 "gephyrin clustering"
evidence=ISS] [GO:0097118 "neuroligin clustering" evidence=ISS]
[GO:0097119 "postsynaptic density protein 95 clustering"
evidence=ISS] [GO:2000463 "positive regulation of excitatory
postsynaptic membrane potential" evidence=ISS] [GO:2000821
"regulation of grooming behavior" evidence=ISS] InterPro:IPR000742
InterPro:IPR027158 PROSITE:PS50026 SMART:SM00181 InterPro:IPR000152
RGD:628659 GO:GO:0016021 GO:GO:0005886 GO:GO:0009986 GO:GO:0046872
GO:GO:0030054 GO:GO:0007612 GO:GO:0050885 GO:GO:0007155
GO:GO:0042734 GO:GO:0051968 GO:GO:0060134 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 GO:GO:0030534 GO:GO:0050839
InterPro:IPR001791 SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025
Pfam:PF02210 InterPro:IPR003585 SMART:SM00294 GO:GO:2000463
GO:GO:2000821 GO:GO:0097119 GO:GO:0097104 PDB:3BIW PDBsum:3BIW
GO:GO:0097116 HOVERGEN:HBG052670 KO:K07377 PANTHER:PTHR10127:SF309
CTD:9378 GO:GO:0097109 GO:GO:0097118 EMBL:M96374 IPI:IPI00208055
IPI:IPI00829418 IPI:IPI00829424 IPI:IPI00829429 IPI:IPI00829436
IPI:IPI00829444 IPI:IPI00829446 IPI:IPI00829455 IPI:IPI00829463
IPI:IPI00829476 IPI:IPI00829484 IPI:IPI00829494 IPI:IPI00829507
PIR:A40228 RefSeq:NP_068535.2 UniGene:Rn.54924
ProteinModelPortal:Q63372 SMR:Q63372 PhosphoSite:Q63372
PRIDE:Q63372 GeneID:60391 KEGG:rno:60391 EvolutionaryTrace:Q63372
NextBio:612088 Genevestigator:Q63372 Uniprot:Q63372
Length = 1530
Score = 199 (75.1 bits), Expect = 8.8e-12, Sum P(2) = 8.8e-12
Identities = 83/322 (25%), Positives = 138/322 (42%)
Query: 92 SSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFD 151
SSY+ L + Y S+ L FK +G++LYN DG DFI + L Y+ + FD
Sbjct: 936 SSYVALATL-QAYTSM-HLFFQFKTTSLDGLILYNS--GDG-NDFIVVELVKGYLHYVFD 990
Query: 152 LGTGAATLR-SSN-PISLGEWHKLRLTRTGRHAY-LQVDRFPSSQILSPGPFTQXXXXXX 208
LG GA ++ SSN P++ +WH + ++R + + +++D ++QI +
Sbjct: 991 LGNGANLIKGSSNKPLNDNQWHNVMISRDTSNLHTVKIDTKITTQITAGA--RNLDLKSD 1048
Query: 209 XXXGGVPDYNIVS-PK-VKIKSSFIGCIQKVLINNHELNILGEAI--QGVNVVNCAHP-- 262
GGV S PK V K F GC+ V +N +++ +A+ G C P
Sbjct: 1049 LYIGGVAKETYKSLPKLVHAKEGFQGCLASVDLNGRLPDLISDALFCNGQIERGCEGPST 1108
Query: 263 -CITQPCGS-GSCVPLYDGYKCVCTQSCKESHLTEVMCASFDHGASFLHYLDPEIIHSSG 320
C C + G C+ +DG+ C C+ + L C D G +++ G
Sbjct: 1109 TCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPL----CN--DPGTTYI------FSKGGG 1156
Query: 321 LLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSK-DFLALGIHNGYAHVMY 379
+ +K+ + D T + + + T +++ SS D+L L IH G V +
Sbjct: 1157 QITHKWPPN-DRPSTRAD-RLAIGFSTVQKEAVLVRVDSSSGLGDYLELHIHQGKIGVKF 1214
Query: 380 XXXXXXXXXXXXQTKINNGVWH 401
IN+G +H
Sbjct: 1215 NVGTDDIAIEESNAIINDGKYH 1236
Score = 147 (56.8 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 42/158 (26%), Positives = 73/158 (46%)
Query: 36 KGRSKECLEDKCNKTPCEHGGKCITTPGSSYCLCPL-GFTGDLCQTRLDLQVPQFNGSSY 94
+G S C ED C+ G C+ C C + F+G LC + G
Sbjct: 1104 EGPSTTCQEDSCSNQ-----GVCLQQWDGFSCDCSMTSFSGPLCNDPGTTYIFSKGGGQI 1158
Query: 95 LRYQGLGEQYLSLLD-LTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLG 153
++ + D L I F ++ +L+ + G+GD++ L+++ + F++G
Sbjct: 1159 THKWPPNDRPSTRADRLAIGFSTVQKEAVLV-RVDSSSGLGDYLELHIHQGKIGVKFNVG 1217
Query: 154 TGAATLRSSNPI-SLGEWHKLRLTRTGRHAYLQVDRFP 190
T + SN I + G++H +R TR+G +A LQVD +P
Sbjct: 1218 TDDIAIEESNAIINDGKYHVVRFTRSGGNATLQVDSWP 1255
Score = 132 (51.5 bits), Expect = 7.3e-11, Sum P(4) = 7.3e-11
Identities = 61/279 (21%), Positives = 116/279 (41%)
Query: 114 FKAIEPNGILLYN-G---HRADGVG------DFIALYLNDRYVDFTFDLGTGAATLRS-S 162
F+ EPNG++L++ G H+ D DF A+ + D ++ D+G+G +++
Sbjct: 531 FRTTEPNGLILFSHGKPRHQKDAKHPQMIKVDFFAIEMLDGHLYLLLDMGSGTIKIKALQ 590
Query: 163 NPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYN--IV 220
++ GEW+ + R GR + V+ + +PG GG+P+ +V
Sbjct: 591 KKVNDGEWYHVDFQRDGRSGTISVNTL-RTPYTAPGESEILDLDDELYLGGLPENKAGLV 649
Query: 221 SPK----VKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNCAHPCITQPCGSGSCVPL 276
P + ++GCI+ + I+ +I Q + + A + C + P
Sbjct: 650 FPTEVWTALLNYGYVGCIRDLFIDGQSKDIR----QMAEIQSTAG--VKPSCSRETAKPC 703
Query: 277 YDGYKCVCTQSCKESHLTEVM-CASFDH-GASFLHYLDPEIIHSSGLLHYKFQLHVDFRI 334
C C++ V C+ + G S + ++ G + K QL V
Sbjct: 704 LSN-PCKNNGMCRDGWNRYVCDCSGTGYLGRSCER--EATVLSYDGSMFMKIQLPVVMH- 759
Query: 335 TGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNG 373
T E ++ +R ++ + G+++ T S S D L L + G
Sbjct: 760 TEAE-DVSLRFRSQRAYGILMATTSRDSADTLRLELDAG 797
Score = 121 (47.7 bits), Expect = 1.1e-09, Sum P(4) = 1.1e-09
Identities = 46/180 (25%), Positives = 83/180 (46%)
Query: 86 VPQFNGSSYLRYQGLGEQYLSLLD-LTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDR 144
+ F GS Y Y S D +T+ FK ++ NG++L+ G AD ++ L L +
Sbjct: 299 IATFKGSEYFCYDLSQNPIQSSSDEITLSFKTLQRNGLMLHTGKSAD----YVNLALKNG 354
Query: 145 YVDFTFDLGTGA--ATLRSSN-PISLGEWHKLRLTRTGR-HA---YLQVDRFPSSQ---- 193
V +LG+GA A + N + WH +++TR R H+ + V++ S
Sbjct: 355 AVSLVINLGSGAFEALVEPVNGKFNDNAWHDVKVTRNLRQHSGIGHAMVNKLHCSVTISV 414
Query: 194 --ILSPGPFTQXXXXXXXXX-----GGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNI 246
IL+ +TQ GG P + P + ++F+GC+++V+ N+++ +
Sbjct: 415 DGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADL-PGSPVSNNFMGCLKEVVYKNNDVRL 473
Score = 117 (46.2 bits), Expect = 1.2e-08, Sum P(3) = 1.2e-08
Identities = 56/226 (24%), Positives = 93/226 (41%)
Query: 25 AWIQLNDGNKIKGRSKECLEDKCNKTPCEHGGKCITTPGSSYCLCP-LGFTGDLCQTRLD 83
A IQ G K S+E + C PC++ G C C C G+ G C+ +
Sbjct: 683 AEIQSTAGVK-PSCSRETAKP-CLSNPCKNNGMCRDGWNRYVCDCSGTGYLGRSCER--E 738
Query: 84 LQVPQFNGSSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLND 143
V ++GS +++ Q + D+++ F++ GIL+ R D D + L L+
Sbjct: 739 ATVLSYDGSMFMKIQLPVVMHTEAEDVSLRFRSQRAYGILMATTSR-DSA-DTLRLELDA 796
Query: 144 RYVDFTFDL---------GTGAATLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQI 194
V T +L G TL + ++ EWH +R+ R G+ L VD +
Sbjct: 797 GRVKLTVNLDCIRINCNSSKGPETLFAGYNLNDNEWHTVRVVRRGKSLKLTVDDQQAMTG 856
Query: 195 LSPGPFTQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLIN 240
G T+ G + + +S + S+FIG +Q + N
Sbjct: 857 QMAGDHTRLEFHNIET-GIITERRYLS---SVPSNFIGHLQSLTFN 898
Score = 97 (39.2 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 47/209 (22%), Positives = 83/209 (39%)
Query: 53 EHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQYLSLLDLTI 112
+HGG C+ CL L G + L+ P G + R+ S +++
Sbjct: 7 QHGGCCLL------CLSLL-LLGCWAELGSGLEFPGAEGQ-WTRFPKWNACCES--EMSF 56
Query: 113 VFKAIEPNGILLYNGHRADGVGDFIALYLN-DRYVDFTFDLGTGA-ATLRSSNPISLGEW 170
K G++LY +G DF+ L L + +F + ATL + P++ G W
Sbjct: 57 QLKTRSARGLVLYFDD--EGFCDFLELILTRGGRLQLSFSIFCAEPATLLADTPVNDGAW 114
Query: 171 HKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPD------YNIVSPKV 224
H +R+ R R+ L +DR + + GG+P + V
Sbjct: 115 HSVRIRRQFRNTTLYIDRAEAKWVEVKSKRRDMTVFSGLFVGGLPPELRAAALKLTLASV 174
Query: 225 KIKSSFIGCIQKVLINNHE-LNILGEAIQ 252
+ + F G I+ V +N+ + L + G ++
Sbjct: 175 REREPFKGWIRDVRVNSSQALPVDGSEVK 203
Score = 84 (34.6 bits), Expect = 7.3e-11, Sum P(4) = 7.3e-11
Identities = 18/66 (27%), Positives = 31/66 (46%)
Query: 344 RIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTK-INNGVWHR 402
+ KT+S GLIL+ S DF+ + + GY H ++ K +N+ WH
Sbjct: 955 QFKTTSLDGLILYN-SGDGNDFIVVELVKGYLHYVFDLGNGANLIKGSSNKPLNDNQWHN 1013
Query: 403 LTVHRN 408
+ + R+
Sbjct: 1014 VMISRD 1019
Score = 80 (33.2 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 25/86 (29%), Positives = 36/86 (41%)
Query: 341 IDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQT--KINNG 398
I + KT +GL+L TG +S D++ L + NG ++ K N+
Sbjct: 324 ITLSFKTLQRNGLMLHTG--KSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDN 381
Query: 399 VWHRLTVHRNFMVVMH-GSSHTRSNK 423
WH + V RN H G H NK
Sbjct: 382 AWHDVKVTRNLR--QHSGIGHAMVNK 405
Score = 69 (29.3 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 19/71 (26%), Positives = 32/71 (45%)
Query: 444 CLIRIDTD--YSMQSISGGKFEQLNTDSGLYVGGVEDIEELTRSKYHHSFKGWISNLILS 501
C + I D + + + L +D YVGG +L S ++F G + ++
Sbjct: 408 CSVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGCLKEVVYK 467
Query: 502 NDYQVKLPLSR 512
N+ V+L LSR
Sbjct: 468 NN-DVRLELSR 477
Score = 65 (27.9 bits), Expect = 7.3e-11, Sum P(4) = 7.3e-11
Identities = 25/88 (28%), Positives = 38/88 (43%)
Query: 446 IRIDTDYSMQSISGGKFEQLNTDSGLYVGGVEDIEELTRSKYHHSFKGWISNLILSNDYQ 505
++IDT + Q +G + L+ S LY+GGV + K H+ +G+ + S D
Sbjct: 1026 VKIDTKITTQITAGAR--NLDLKSDLYIGGVAKETYKSLPKLVHAKEGF-QGCLASVDLN 1082
Query: 506 VKLPLSRSQGSSCQLTCETLNTG-QVTC 532
+LP S C E G TC
Sbjct: 1083 GRLPDLISDALFCNGQIERGCEGPSTTC 1110
Score = 58 (25.5 bits), Expect = 3.8e-07, Sum P(4) = 3.8e-07
Identities = 10/45 (22%), Positives = 22/45 (48%)
Query: 364 DFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGVWHRLTVHRN 408
DF A+ + +G+ +++ Q K+N+G W+ + R+
Sbjct: 562 DFFAIEMLDGHLYLLLDMGSGTIKIKALQKKVNDGEWYHVDFQRD 606
Score = 48 (22.0 bits), Expect = 8.8e-12, Sum P(2) = 8.8e-12
Identities = 14/54 (25%), Positives = 22/54 (40%)
Query: 27 IQLNDGNKIKGRSKEC-LEDKCNKTPCEHGGKCITTPGSSYCLCP-LGFTGDLC 78
++L++ G C D+ + C +GG C + C C GF G C
Sbjct: 202 VKLDEEPPNSGGGSPCEAGDEGDGGVCLNGGVCSVVDDQAVCDCSRTGFRGKDC 255
Score = 47 (21.6 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 15/51 (29%), Positives = 27/51 (52%)
Query: 428 EFKCLSIQRLHRTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVED 478
E+ + QR R+G + + T Y+ + G+ E L+ D LY+GG+ +
Sbjct: 597 EWYHVDFQRDGRSGTISVNTLRTPYT----APGESEILDLDDELYLGGLPE 643
Score = 41 (19.5 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 8/28 (28%), Positives = 16/28 (57%)
Query: 11 DDWNTVRVFRHRWDAWIQLNDGNKIKGR 38
++W+TVRV R + ++D + G+
Sbjct: 830 NEWHTVRVVRRGKSLKLTVDDQQAMTGQ 857
>MGI|MGI:1315203 [details] [associations]
symbol:Slit1 "slit homolog 1 (Drosophila)" species:10090
"Mus musculus" [GO:0005102 "receptor binding" evidence=TAS]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005615 "extracellular
space" evidence=ISO;IDA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IMP;IDA]
[GO:0007411 "axon guidance" evidence=ISO;IGI;IDA] [GO:0008045
"motor neuron axon guidance" evidence=ISO] [GO:0021772 "olfactory
bulb development" evidence=IGI] [GO:0022028 "tangential migration
from the subventricular zone to the olfactory bulb" evidence=IMP]
[GO:0022029 "telencephalon cell migration" evidence=IGI]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0031290
"retinal ganglion cell axon guidance" evidence=IGI;IMP] [GO:0033563
"dorsal/ventral axon guidance" evidence=IGI] [GO:0040023
"establishment of nucleus localization" evidence=IDA] [GO:0043395
"heparan sulfate proteoglycan binding" evidence=ISO] [GO:0048495
"Roundabout binding" evidence=ISO;IPI] [GO:0048812 "neuron
projection morphogenesis" evidence=IGI] [GO:0048843 "negative
regulation of axon extension involved in axon guidance"
evidence=ISO] [GO:0048846 "axon extension involved in axon
guidance" evidence=ISO] [GO:0050919 "negative chemotaxis"
evidence=ISO;IMP] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 MGI:MGI:1315203
GO:GO:0005737 GO:GO:0005615 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005102
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0008045 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS50025
GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0040023 GO:GO:0031290 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
Pfam:PF12661 GO:GO:0033563 GO:GO:0051964 Pfam:PF01463
GeneTree:ENSGT00700000104083 GO:GO:0022028 GO:GO:0050919
GO:GO:0048843 CTD:6585 HOGENOM:HOG000116120 HOVERGEN:HBG057959
KO:K06838 OrthoDB:EOG4VDPXM EMBL:AF144627 EMBL:AK122376
EMBL:BC057131 EMBL:BC062091 IPI:IPI00330211 RefSeq:NP_056563.2
UniGene:Mm.40322 ProteinModelPortal:Q80TR4 SMR:Q80TR4 STRING:Q80TR4
PhosphoSite:Q80TR4 PRIDE:Q80TR4 Ensembl:ENSMUST00000025993
GeneID:20562 KEGG:mmu:20562 UCSC:uc008hmf.2 InParanoid:Q80TR4
OMA:KCVHGKC NextBio:298853 Bgee:Q80TR4 CleanEx:MM_SLIT1
Genevestigator:Q80TR4 GermOnline:ENSMUSG00000025020 Uniprot:Q80TR4
Length = 1531
Score = 197 (74.4 bits), Expect = 9.1e-12, P = 9.1e-12
Identities = 74/269 (27%), Positives = 115/269 (42%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQYLS 106
C T C++G C+ C C GF G C+ +L L V + +YL++ L Q
Sbjct: 1128 CEGTECQNGANCVDQGSRPVCQCLPGFGGPECE-KL-LSVNFVDRDTYLQFTDL--QNWP 1183
Query: 107 LLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGT-GAATLRSSNPI 165
++T+ E NGILLYNG D IA+ L +V ++D G+ ++ + S+ I
Sbjct: 1184 RANITLQVSTAEDNGILLYNGDN-----DHIAVELYQGHVRVSYDPGSYPSSAIYSAETI 1238
Query: 166 SLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVP-DYNIVSPKV 224
+ G++H + L + L +D + + G GG+P D N + ++
Sbjct: 1239 NDGQFHTVELVTFDQMVNLSIDGGSPMTMDNFGKHYTLNSEAPLYVGGMPVDVNSAAFRL 1298
Query: 225 -KIKS--SFIGCIQKVLINNHELNILGEAIQGVNVVNCAHPCITQPCGSGSCVP-LYDGY 280
+I + SF GCI+ + INN EL + VV PC C G C P G
Sbjct: 1299 WQILNGTSFHGCIRNLYINN-ELQDFTKTQMKPGVVPGCEPCRKLYCLHGICQPNATPGP 1357
Query: 281 KCVCTQSCKESHLTEVMCASFDHGASFLH 309
C C H + + HG +H
Sbjct: 1358 VCHCEAGWGGLHCDQPVDGPC-HGHKCVH 1385
Score = 109 (43.4 bits), Expect = 3.3e-07, Sum P(3) = 3.3e-07
Identities = 21/49 (42%), Positives = 27/49 (55%)
Query: 37 GRSKECLEDKCNK--TPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLD 83
GR+ E L D C+ PC+H +C+ TP C C LG+TGD C D
Sbjct: 1037 GRACEQLVDFCSPDMNPCQHEAQCVGTPDGPRCECMLGYTGDNCSENQD 1085
Score = 100 (40.3 bits), Expect = 3.5e-07, Sum P(4) = 3.5e-07
Identities = 18/46 (39%), Positives = 24/46 (52%)
Query: 45 DKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQFN 90
D C K C +GG C+ G+ C CPL +TG C+ +D P N
Sbjct: 1007 DDCVKHACVNGGVCVDGVGNYTCQCPLQYTGRACEQLVDFCSPDMN 1052
Score = 92 (37.4 bits), Expect = 2.4e-06, Sum P(4) = 2.4e-06
Identities = 20/51 (39%), Positives = 22/51 (43%)
Query: 36 KGRSKECLEDKCNKTPCEHGGKCITTPGSSY---CLCPLGFTGDLCQTRLD 83
KGR E D C+ PC +GG C G C CP GF G C D
Sbjct: 957 KGRHCEVSLDGCSSNPCGNGGTCHAQEGEDAGFTCSCPSGFEGPTCGVDTD 1007
Score = 89 (36.4 bits), Expect = 4.9e-06, Sum P(4) = 4.9e-06
Identities = 16/40 (40%), Positives = 21/40 (52%)
Query: 45 DKCNKTPCEHGGKCITTPGSSY-CLCPLGFTGDLCQTRLD 83
D C +PC++ G C P Y C CP G+ G C+ LD
Sbjct: 927 DPCLSSPCQNQGTCHNDPLEVYRCTCPSGYKGRHCEVSLD 966
Score = 87 (35.7 bits), Expect = 6.7e-05, Sum P(3) = 6.7e-05
Identities = 13/36 (36%), Positives = 21/36 (58%)
Query: 44 EDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQ 79
+D C C++G +C+ S CLC G++G LC+
Sbjct: 1084 QDDCKDHKCQNGAQCVDEVNSYACLCVEGYSGQLCE 1119
Score = 76 (31.8 bits), Expect = 3.3e-07, Sum P(3) = 3.3e-07
Identities = 15/62 (24%), Positives = 31/62 (50%)
Query: 340 NIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGV 399
NI +++ T+ +G++L+ G + D +A+ ++ G+ V Y IN+G
Sbjct: 1186 NITLQVSTAEDNGILLYNGDN---DHIAVELYQGHVRVSYDPGSYPSSAIYSAETINDGQ 1242
Query: 400 WH 401
+H
Sbjct: 1243 FH 1244
Score = 67 (28.6 bits), Expect = 3.3e-07, Sum P(3) = 3.3e-07
Identities = 21/65 (32%), Positives = 32/65 (49%)
Query: 446 IRIDTDYSMQSISGGKFEQLNTDSGLYVGGVE-DIEELTRSKYH----HSFKGWISNLIL 500
+ ID M + GK LN+++ LYVGG+ D+ + SF G I NL +
Sbjct: 1257 LSIDGGSPMTMDNFGKHYTLNSEAPLYVGGMPVDVNSAAFRLWQILNGTSFHGCIRNLYI 1316
Query: 501 SNDYQ 505
+N+ Q
Sbjct: 1317 NNELQ 1321
Score = 51 (23.0 bits), Expect = 3.5e-07, Sum P(4) = 3.5e-07
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 249 EAIQGVNVVNCAH---PCITQPCGSGS-CVPLYDGYKCVCTQ 286
E + G NC+ C C +G+ CV + Y C+C +
Sbjct: 1070 ECMLGYTGDNCSENQDDCKDHKCQNGAQCVDEVNSYACLCVE 1111
Score = 46 (21.3 bits), Expect = 1.5e-05, Sum P(4) = 1.5e-05
Identities = 9/26 (34%), Positives = 12/26 (46%)
Query: 263 CITQPCGSGSCVPLYDGYKCVCTQSC 288
C + PCG+G +G T SC
Sbjct: 968 CSSNPCGNGGTCHAQEGEDAGFTCSC 993
Score = 40 (19.1 bits), Expect = 2.7e-05, Sum P(4) = 2.7e-05
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 244 LNILGEAIQGVNVVNCAHPCITQPCG-SGSCVPLYDGYKCVC 284
L G A + +V+ P + PC CV DG +C C
Sbjct: 1033 LQYTGRACE--QLVDFCSPDMN-PCQHEAQCVGTPDGPRCEC 1071
>UNIPROTKB|O75093 [details] [associations]
symbol:SLIT1 "Slit homolog 1 protein" species:9606 "Homo
sapiens" [GO:0021510 "spinal cord development" evidence=IEA]
[GO:0031290 "retinal ganglion cell axon guidance" evidence=IEA]
[GO:0033563 "dorsal/ventral axon guidance" evidence=IEA]
[GO:0040023 "establishment of nucleus localization" evidence=IEA]
[GO:0043395 "heparan sulfate proteoglycan binding" evidence=IEA]
[GO:0048843 "negative regulation of axon extension involved in axon
guidance" evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IMP] [GO:0005509 "calcium ion binding" evidence=NAS]
[GO:0005615 "extracellular space" evidence=NAS] [GO:0048853
"forebrain morphogenesis" evidence=NAS] [GO:0048846 "axon extension
involved in axon guidance" evidence=IDA] [GO:0050919 "negative
chemotaxis" evidence=IDA] [GO:0051964 "negative regulation of
synapse assembly" evidence=ISS] [GO:0048495 "Roundabout binding"
evidence=IPI] [GO:0021834 "chemorepulsion involved in embryonic
olfactory bulb interneuron precursor migration" evidence=IDA]
[GO:0007411 "axon guidance" evidence=IDA;TAS] [GO:0005737
"cytoplasm" evidence=IDA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005737
Reactome:REACT_111045 GO:GO:0005615 EMBL:CH471066 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0008045 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS50025
GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0040023 InterPro:IPR025875 Pfam:PF12799 GO:GO:0031290
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 GO:GO:0048846 Pfam:PF12661 GO:GO:0033563 GO:GO:0051964
GO:GO:0048853 Pfam:PF01463 EMBL:AL442123 GO:GO:0022028
GO:GO:0050919 GO:GO:0048843 EMBL:AB017167 EMBL:AB011537
EMBL:AL512424 EMBL:BC146851 EMBL:AY029183 IPI:IPI00296434
IPI:IPI00871419 RefSeq:NP_003052.2 UniGene:Hs.632082
ProteinModelPortal:O75093 SMR:O75093 IntAct:O75093
MINT:MINT-2797238 STRING:O75093 PhosphoSite:O75093 PaxDb:O75093
PRIDE:O75093 Ensembl:ENST00000266058 GeneID:6585 KEGG:hsa:6585
UCSC:uc001kmw.2 CTD:6585 GeneCards:GC10M098747 H-InvDB:HIX0079168
H-InvDB:HIX0170440 HGNC:HGNC:11085 HPA:HPA006879 MIM:603742
neXtProt:NX_O75093 PharmGKB:PA35938 HOGENOM:HOG000116120
HOVERGEN:HBG057959 InParanoid:O75093 KO:K06838 OrthoDB:EOG4VDPXM
PhylomeDB:O75093 ChiTaRS:SLIT1 GenomeRNAi:6585 NextBio:25625
ArrayExpress:O75093 Bgee:O75093 CleanEx:HS_SLIT1
Genevestigator:O75093 GermOnline:ENSG00000187122 Uniprot:O75093
Length = 1534
Score = 193 (73.0 bits), Expect = 9.6e-12, Sum P(2) = 9.6e-12
Identities = 69/244 (28%), Positives = 107/244 (43%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQYLS 106
C T C++G C+ C C GF G C+ +L L V + +YL++ L Q
Sbjct: 1131 CEGTECQNGANCVDQGNRPVCQCLPGFGGPECE-KL-LSVNFVDRDTYLQFTDL--QNWP 1186
Query: 107 LLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGT-GAATLRSSNPI 165
++T+ E NGILLYNG D IA+ L +V ++D G+ ++ + S+ I
Sbjct: 1187 RANITLQVSTAEDNGILLYNGDN-----DHIAVELYQGHVRVSYDPGSYPSSAIYSAETI 1241
Query: 166 SLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVP-DYNIVSPKV 224
+ G++H + L + L +D + + G GG+P D N + ++
Sbjct: 1242 NDGQFHTVELVAFDQMVNLSIDGGSPMTMDNFGKHYTLNSEAPLYVGGMPVDVNSAAFRL 1301
Query: 225 -KIKSS--FIGCIQKVLINNHELNILGEAIQGVNVVNCAHPCITQPCGSGSCVP-LYDGY 280
+I + F GCI+ + INN EL + VV PC C G C P G
Sbjct: 1302 WQILNGTGFHGCIRNLYINN-ELQDFTKTQMKPGVVPGCEPCRKLYCLHGICQPNATPGP 1360
Query: 281 KCVC 284
C C
Sbjct: 1361 MCHC 1364
Score = 104 (41.7 bits), Expect = 8.1e-07, Sum P(4) = 8.1e-07
Identities = 29/86 (33%), Positives = 34/86 (39%)
Query: 36 KGRSKECLEDKCNKTPCEHGGKCITTPGSSY---CLCPLGFTGDLCQTRLDLQVPQFNGS 92
KGR E D C+ PCE+GG C G C CP GF G C D V +
Sbjct: 957 KGRDCEVSLDSCSSGPCENGGTCHAQEGEDAPFTCSCPTGFEGPTCGVNTDDCVDHACAN 1016
Query: 93 SYLRYQGLGEQYLSLLDLTIVFKAIE 118
+ G+G Y L KA E
Sbjct: 1017 GGVCVDGVGN-YTCQCPLQYEGKACE 1041
Score = 96 (38.9 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
Identities = 18/50 (36%), Positives = 26/50 (52%)
Query: 36 KGRSKECLEDKCNK--TPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLD 83
+G++ E L D C+ PC+H +C+ TP C C G+ GD C D
Sbjct: 1036 EGKACEQLVDLCSPDLNPCQHEAQCVGTPDGPRCECMPGYAGDNCSENQD 1085
Score = 94 (38.1 bits), Expect = 8.8e-06, Sum P(4) = 8.8e-06
Identities = 17/46 (36%), Positives = 23/46 (50%)
Query: 45 DKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQFN 90
D C C +GG C+ G+ C CPL + G C+ +DL P N
Sbjct: 1007 DDCVDHACANGGVCVDGVGNYTCQCPLQYEGKACEQLVDLCSPDLN 1052
Score = 89 (36.4 bits), Expect = 0.00010, Sum P(3) = 0.00010
Identities = 15/45 (33%), Positives = 24/45 (53%)
Query: 44 EDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQ 88
+D C C++G +C+ S CLC G++G LC+ L P+
Sbjct: 1084 QDDCRDHRCQNGAQCMDEVNSYSCLCAEGYSGQLCEIPPHLPAPK 1128
Score = 87 (35.7 bits), Expect = 4.6e-05, Sum P(4) = 4.6e-05
Identities = 16/40 (40%), Positives = 21/40 (52%)
Query: 45 DKCNKTPCEHGGKCITTPGSSY-CLCPLGFTGDLCQTRLD 83
D C +PC++ G C P Y C CP G+ G C+ LD
Sbjct: 927 DLCLSSPCQNQGTCHNDPLEVYRCACPSGYKGRDCEVSLD 966
Score = 76 (31.8 bits), Expect = 8.1e-07, Sum P(4) = 8.1e-07
Identities = 15/62 (24%), Positives = 31/62 (50%)
Query: 340 NIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGV 399
NI +++ T+ +G++L+ G + D +A+ ++ G+ V Y IN+G
Sbjct: 1189 NITLQVSTAEDNGILLYNGDN---DHIAVELYQGHVRVSYDPGSYPSSAIYSAETINDGQ 1245
Query: 400 WH 401
+H
Sbjct: 1246 FH 1247
Score = 63 (27.2 bits), Expect = 8.1e-07, Sum P(4) = 8.1e-07
Identities = 20/65 (30%), Positives = 31/65 (47%)
Query: 446 IRIDTDYSMQSISGGKFEQLNTDSGLYVGGVE-DIEELTRSKYH----HSFKGWISNLIL 500
+ ID M + GK LN+++ LYVGG+ D+ + F G I NL +
Sbjct: 1260 LSIDGGSPMTMDNFGKHYTLNSEAPLYVGGMPVDVNSAAFRLWQILNGTGFHGCIRNLYI 1319
Query: 501 SNDYQ 505
+N+ Q
Sbjct: 1320 NNELQ 1324
Score = 54 (24.1 bits), Expect = 9.6e-12, Sum P(2) = 9.6e-12
Identities = 11/24 (45%), Positives = 11/24 (45%)
Query: 262 PCITQPCGSGSCVPLYD-GYKCVC 284
PC C G CVPL Y C C
Sbjct: 1380 PCHGHKCVHGQCVPLDALSYSCQC 1403
Score = 47 (21.6 bits), Expect = 8.1e-07, Sum P(4) = 8.1e-07
Identities = 11/42 (26%), Positives = 19/42 (45%)
Query: 249 EAIQGVNVVNCAH---PCITQPCGSGS-CVPLYDGYKCVCTQ 286
E + G NC+ C C +G+ C+ + Y C+C +
Sbjct: 1070 ECMPGYAGDNCSENQDDCRDHRCQNGAQCMDEVNSYSCLCAE 1111
Score = 42 (19.8 bits), Expect = 2.5e-06, Sum P(4) = 2.5e-06
Identities = 15/57 (26%), Positives = 23/57 (40%)
Query: 248 GEAIQGVNVVNCAHPCITQPCG-SGSCVPLYDGYKCVCTQSCKESHLTEVMCASFDH 303
G+A + +V+ P + PC CV DG +C C + +E DH
Sbjct: 1037 GKACE--QLVDLCSPDLN-PCQHEAQCVGTPDGPRCECMPGYAGDNCSENQDDCRDH 1090
Score = 37 (18.1 bits), Expect = 0.00042, Sum P(4) = 0.00042
Identities = 8/26 (30%), Positives = 11/26 (42%)
Query: 263 CITQPCGSGSCVPLYDGYKCVCTQSC 288
C + PC +G +G T SC
Sbjct: 968 CSSGPCENGGTCHAQEGEDAPFTCSC 993
>UNIPROTKB|D4AC66 [details] [associations]
symbol:Celsr3 "Cadherin EGF LAG seven-pass G-type receptor
3" species:10116 "Rattus norvegicus" [GO:0004930 "G-protein coupled
receptor activity" evidence=IEA] [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007156 "homophilic cell adhesion" evidence=IEA] [GO:0007218
"neuropeptide signaling pathway" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR000203
InterPro:IPR000742 InterPro:IPR000832 InterPro:IPR001879
InterPro:IPR002126 InterPro:IPR015919 InterPro:IPR017981
InterPro:IPR017983 InterPro:IPR020894 Pfam:PF00002 Pfam:PF00008
Pfam:PF00028 Pfam:PF01825 Pfam:PF02793 PRINTS:PR00205
PRINTS:PR00249 PROSITE:PS00232 PROSITE:PS00650 PROSITE:PS50026
PROSITE:PS50221 PROSITE:PS50227 PROSITE:PS50261 PROSITE:PS50268
SMART:SM00008 SMART:SM00112 SMART:SM00181 SMART:SM00303 RGD:621787
GO:GO:0016021 GO:GO:0005886 GO:GO:0004930 GO:GO:0007218
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR002049
InterPro:IPR001791 SMART:SM00180 SMART:SM00282 PROSITE:PS50025
GO:GO:0007156 SUPFAM:SSF49313 InterPro:IPR022624 Pfam:PF12003
Gene3D:2.60.40.60 Pfam:PF02210 IPI:IPI00559259
ProteinModelPortal:D4AC66 Ensembl:ENSRNOT00000042104
ArrayExpress:D4AC66 Uniprot:D4AC66
Length = 3303
Score = 173 (66.0 bits), Expect = 9.7e-12, Sum P(2) = 9.7e-12
Identities = 42/135 (31%), Positives = 69/135 (51%)
Query: 46 KCNKTPCEHGGKCITTPGSSY-CLCPLG--FTGDLCQTRLDLQVPQFNGSSYLRYQGLGE 102
+C C +GG C P + C CP G F G C+ + F SS++ ++GL +
Sbjct: 1469 RCVPGVCRNGGTCTNAPNGGFRCQCPAGGAFEGPRCE----VAARSFPPSSFVMFRGLRQ 1524
Query: 103 QYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSS 162
++ L L++ F ++P+G+L YNG R + DF+AL L V T+ G + + +
Sbjct: 1525 RFH--LTLSLSFATVQPSGLLFYNG-RLNEKHDFLALELVAGQVRLTYSTGESSTVVSPT 1581
Query: 163 NP--ISLGEWHKLRL 175
P +S G+WH + L
Sbjct: 1582 VPGGLSDGQWHTVHL 1596
Score = 152 (58.6 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 67/259 (25%), Positives = 98/259 (37%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVP-QFNGSSYLRYQGLGEQYL 105
C PC++GG C G C CP+GF G C RL + P F G+ L + + +
Sbjct: 1717 CASGPCKNGGLCSERWGGFSCDCPVGFGGKDC--RLTMAHPYHFQGNGTLSWDFGNDMPV 1774
Query: 106 SL-LDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAAT--LRSS 162
S+ L + F+ G+L+ G + L+ + T +G A L
Sbjct: 1775 SVPWYLGLSFRTRATKGVLM---QVQLGPHSVLLCKLDQGLLSVTLSRASGHAVHLLLDQ 1831
Query: 163 NPISLGEWHKLRLT-------RTGRHAYL-QVDRFPSSQILSPGPFTQXXXXXXXXXGGV 214
+S G WH LRL R G H ++ +D ++ G + GG
Sbjct: 1832 MTVSDGRWHDLRLELQEEPGGRRGHHIFMVSLDFTLFQDTMAMGSELEGLKVKHLHVGGP 1891
Query: 215 PDYNIVSPKVKIKSSFIGCIQKVLINNHEL--NILGEAIQGVNVV-NCAHPCITQPCGSG 271
P S K + +GCIQ V + L +NV C +T PC SG
Sbjct: 1892 PP----SSKEEGPQGLVGCIQGVWTGFTPFGSSALPPPSHRINVEPGCT---VTNPCASG 1944
Query: 272 SCVP------LYDGYKCVC 284
C P L+ + C C
Sbjct: 1945 PCPPHANCKDLWQTFSCTC 1963
Score = 82 (33.9 bits), Expect = 9.7e-12, Sum P(2) = 9.7e-12
Identities = 20/77 (25%), Positives = 34/77 (44%)
Query: 212 GGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNC---AHPCITQPC 268
GGVP N+ + FIGC++ + I+ +++ C +H C + PC
Sbjct: 1665 GGVP--NLPENFPVSRKDFIGCMRDLHIDGRRVDMAAFVANNGTTAGCQAKSHFCASGPC 1722
Query: 269 GSGS-CVPLYDGYKCVC 284
+G C + G+ C C
Sbjct: 1723 KNGGLCSERWGGFSCDC 1739
Score = 42 (19.8 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 6/17 (35%), Positives = 12/17 (70%)
Query: 44 EDKCNKTPCEHGGKCIT 60
++ C + PCE+ KC++
Sbjct: 1367 DNVCLREPCENYMKCVS 1383
Score = 40 (19.1 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 266 QPCGSGSCVPLYDGYKCVCT-QSCKESHLTEVMC 298
+P GS SC+P D Y T +SC H + C
Sbjct: 2058 RPRGSDSCLPC-DCYPVGSTSRSCAP-HSGQCPC 2089
>RGD|621787 [details] [associations]
symbol:Celsr3 "cadherin, EGF LAG seven-pass G-type receptor 3"
species:10116 "Rattus norvegicus" [GO:0001764 "neuron migration"
evidence=IEA;ISO] [GO:0004930 "G-protein coupled receptor activity"
evidence=IEA] [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007156 "homophilic
cell adhesion" evidence=IEA] [GO:0007218 "neuropeptide signaling
pathway" evidence=IEA] [GO:0007413 "axonal fasciculation"
evidence=IEA;ISO] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0032880 "regulation of protein localization" evidence=ISO]
[GO:0042384 "cilium assembly" evidence=ISO] InterPro:IPR000203
InterPro:IPR000742 InterPro:IPR000832 InterPro:IPR001879
InterPro:IPR002126 InterPro:IPR015919 InterPro:IPR017981
InterPro:IPR017983 InterPro:IPR020894 Pfam:PF00002 Pfam:PF00008
Pfam:PF00028 Pfam:PF01825 Pfam:PF02793 PRINTS:PR00205
PRINTS:PR00249 PROSITE:PS00232 PROSITE:PS00649 PROSITE:PS00650
PROSITE:PS50026 PROSITE:PS50221 PROSITE:PS50227 PROSITE:PS50261
PROSITE:PS50268 SMART:SM00008 SMART:SM00112 SMART:SM00181
SMART:SM00303 RGD:621787 GO:GO:0016021 GO:GO:0005886 GO:GO:0001764
GO:GO:0004930 GO:GO:0007218 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186 eggNOG:NOG12793
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 SMART:SM00180
SMART:SM00282 PROSITE:PS00010 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 GO:GO:0007413 GO:GO:0007156 SUPFAM:SSF49313
InterPro:IPR022624 Pfam:PF12003 Gene3D:2.60.40.60 Pfam:PF02210
HOGENOM:HOG000231346 HOVERGEN:HBG050887 CTD:1951 KO:K04602
OrthoDB:EOG4C87RG EMBL:AB011528 IPI:IPI00207551 RefSeq:NP_112610.1
UniGene:Rn.14558 ProteinModelPortal:O88278 STRING:O88278
PhosphoSite:O88278 PRIDE:O88278 GeneID:83466 KEGG:rno:83466
UCSC:RGD:621787 InParanoid:O88278 NextBio:615859
ArrayExpress:O88278 Genevestigator:O88278
GermOnline:ENSRNOG00000034005 Uniprot:O88278
Length = 3313
Score = 173 (66.0 bits), Expect = 9.8e-12, Sum P(2) = 9.8e-12
Identities = 42/135 (31%), Positives = 69/135 (51%)
Query: 46 KCNKTPCEHGGKCITTPGSSY-CLCPLG--FTGDLCQTRLDLQVPQFNGSSYLRYQGLGE 102
+C C +GG C P + C CP G F G C+ + F SS++ ++GL +
Sbjct: 1469 RCVPGVCRNGGTCTNAPNGGFRCQCPAGGAFEGPRCE----VAARSFPPSSFVMFRGLRQ 1524
Query: 103 QYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSS 162
++ L L++ F ++P+G+L YNG R + DF+AL L V T+ G + + +
Sbjct: 1525 RFH--LTLSLSFATVQPSGLLFYNG-RLNEKHDFLALELVAGQVRLTYSTGESSTVVSPT 1581
Query: 163 NP--ISLGEWHKLRL 175
P +S G+WH + L
Sbjct: 1582 VPGGLSDGQWHTVHL 1596
Score = 152 (58.6 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 67/259 (25%), Positives = 98/259 (37%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVP-QFNGSSYLRYQGLGEQYL 105
C PC++GG C G C CP+GF G C RL + P F G+ L + + +
Sbjct: 1717 CASGPCKNGGLCSERWGGFSCDCPVGFGGKDC--RLTMAHPYHFQGNGTLSWDFGNDMPV 1774
Query: 106 SL-LDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAAT--LRSS 162
S+ L + F+ G+L+ G + L+ + T +G A L
Sbjct: 1775 SVPWYLGLSFRTRATKGVLM---QVQLGPHSVLLCKLDQGLLSVTLSRASGHAVHLLLDQ 1831
Query: 163 NPISLGEWHKLRLT-------RTGRHAYL-QVDRFPSSQILSPGPFTQXXXXXXXXXGGV 214
+S G WH LRL R G H ++ +D ++ G + GG
Sbjct: 1832 MTVSDGRWHDLRLELQEEPGGRRGHHIFMVSLDFTLFQDTMAMGSELEGLKVKHLHVGGP 1891
Query: 215 PDYNIVSPKVKIKSSFIGCIQKVLINNHEL--NILGEAIQGVNVV-NCAHPCITQPCGSG 271
P S K + +GCIQ V + L +NV C +T PC SG
Sbjct: 1892 PP----SSKEEGPQGLVGCIQGVWTGFTPFGSSALPPPSHRINVEPGCT---VTNPCASG 1944
Query: 272 SCVP------LYDGYKCVC 284
C P L+ + C C
Sbjct: 1945 PCPPHANCKDLWQTFSCTC 1963
Score = 82 (33.9 bits), Expect = 9.8e-12, Sum P(2) = 9.8e-12
Identities = 20/77 (25%), Positives = 34/77 (44%)
Query: 212 GGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNC---AHPCITQPC 268
GGVP N+ + FIGC++ + I+ +++ C +H C + PC
Sbjct: 1665 GGVP--NLPENFPVSRKDFIGCMRDLHIDGRRVDMAAFVANNGTTAGCQAKSHFCASGPC 1722
Query: 269 GSGS-CVPLYDGYKCVC 284
+G C + G+ C C
Sbjct: 1723 KNGGLCSERWGGFSCDC 1739
Score = 42 (19.8 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 6/17 (35%), Positives = 12/17 (70%)
Query: 44 EDKCNKTPCEHGGKCIT 60
++ C + PCE+ KC++
Sbjct: 1367 DNVCLREPCENYMKCVS 1383
Score = 40 (19.1 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 266 QPCGSGSCVPLYDGYKCVCT-QSCKESHLTEVMC 298
+P GS SC+P D Y T +SC H + C
Sbjct: 2058 RPRGSDSCLPC-DCYPVGSTSRSCAP-HSGQCPC 2089
>UNIPROTKB|O88278 [details] [associations]
symbol:Celsr3 "Cadherin EGF LAG seven-pass G-type receptor
3" species:10116 "Rattus norvegicus" [GO:0004930 "G-protein coupled
receptor activity" evidence=IEA] [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0007156 "homophilic cell adhesion" evidence=IEA]
[GO:0007218 "neuropeptide signaling pathway" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR000203
InterPro:IPR000742 InterPro:IPR000832 InterPro:IPR001879
InterPro:IPR002126 InterPro:IPR015919 InterPro:IPR017981
InterPro:IPR017983 InterPro:IPR020894 Pfam:PF00002 Pfam:PF00008
Pfam:PF00028 Pfam:PF01825 Pfam:PF02793 PRINTS:PR00205
PRINTS:PR00249 PROSITE:PS00232 PROSITE:PS00649 PROSITE:PS00650
PROSITE:PS50026 PROSITE:PS50221 PROSITE:PS50227 PROSITE:PS50261
PROSITE:PS50268 SMART:SM00008 SMART:SM00112 SMART:SM00181
SMART:SM00303 RGD:621787 GO:GO:0016021 GO:GO:0005886 GO:GO:0001764
GO:GO:0004930 GO:GO:0007218 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186 eggNOG:NOG12793
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 SMART:SM00180
SMART:SM00282 PROSITE:PS00010 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 GO:GO:0007413 GO:GO:0007156 SUPFAM:SSF49313
InterPro:IPR022624 Pfam:PF12003 Gene3D:2.60.40.60 Pfam:PF02210
HOGENOM:HOG000231346 HOVERGEN:HBG050887 CTD:1951 KO:K04602
OrthoDB:EOG4C87RG EMBL:AB011528 IPI:IPI00207551 RefSeq:NP_112610.1
UniGene:Rn.14558 ProteinModelPortal:O88278 STRING:O88278
PhosphoSite:O88278 PRIDE:O88278 GeneID:83466 KEGG:rno:83466
UCSC:RGD:621787 InParanoid:O88278 NextBio:615859
ArrayExpress:O88278 Genevestigator:O88278
GermOnline:ENSRNOG00000034005 Uniprot:O88278
Length = 3313
Score = 173 (66.0 bits), Expect = 9.8e-12, Sum P(2) = 9.8e-12
Identities = 42/135 (31%), Positives = 69/135 (51%)
Query: 46 KCNKTPCEHGGKCITTPGSSY-CLCPLG--FTGDLCQTRLDLQVPQFNGSSYLRYQGLGE 102
+C C +GG C P + C CP G F G C+ + F SS++ ++GL +
Sbjct: 1469 RCVPGVCRNGGTCTNAPNGGFRCQCPAGGAFEGPRCE----VAARSFPPSSFVMFRGLRQ 1524
Query: 103 QYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSS 162
++ L L++ F ++P+G+L YNG R + DF+AL L V T+ G + + +
Sbjct: 1525 RFH--LTLSLSFATVQPSGLLFYNG-RLNEKHDFLALELVAGQVRLTYSTGESSTVVSPT 1581
Query: 163 NP--ISLGEWHKLRL 175
P +S G+WH + L
Sbjct: 1582 VPGGLSDGQWHTVHL 1596
Score = 152 (58.6 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 67/259 (25%), Positives = 98/259 (37%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVP-QFNGSSYLRYQGLGEQYL 105
C PC++GG C G C CP+GF G C RL + P F G+ L + + +
Sbjct: 1717 CASGPCKNGGLCSERWGGFSCDCPVGFGGKDC--RLTMAHPYHFQGNGTLSWDFGNDMPV 1774
Query: 106 SL-LDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAAT--LRSS 162
S+ L + F+ G+L+ G + L+ + T +G A L
Sbjct: 1775 SVPWYLGLSFRTRATKGVLM---QVQLGPHSVLLCKLDQGLLSVTLSRASGHAVHLLLDQ 1831
Query: 163 NPISLGEWHKLRLT-------RTGRHAYL-QVDRFPSSQILSPGPFTQXXXXXXXXXGGV 214
+S G WH LRL R G H ++ +D ++ G + GG
Sbjct: 1832 MTVSDGRWHDLRLELQEEPGGRRGHHIFMVSLDFTLFQDTMAMGSELEGLKVKHLHVGGP 1891
Query: 215 PDYNIVSPKVKIKSSFIGCIQKVLINNHEL--NILGEAIQGVNVV-NCAHPCITQPCGSG 271
P S K + +GCIQ V + L +NV C +T PC SG
Sbjct: 1892 PP----SSKEEGPQGLVGCIQGVWTGFTPFGSSALPPPSHRINVEPGCT---VTNPCASG 1944
Query: 272 SCVP------LYDGYKCVC 284
C P L+ + C C
Sbjct: 1945 PCPPHANCKDLWQTFSCTC 1963
Score = 82 (33.9 bits), Expect = 9.8e-12, Sum P(2) = 9.8e-12
Identities = 20/77 (25%), Positives = 34/77 (44%)
Query: 212 GGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNC---AHPCITQPC 268
GGVP N+ + FIGC++ + I+ +++ C +H C + PC
Sbjct: 1665 GGVP--NLPENFPVSRKDFIGCMRDLHIDGRRVDMAAFVANNGTTAGCQAKSHFCASGPC 1722
Query: 269 GSGS-CVPLYDGYKCVC 284
+G C + G+ C C
Sbjct: 1723 KNGGLCSERWGGFSCDC 1739
Score = 42 (19.8 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 6/17 (35%), Positives = 12/17 (70%)
Query: 44 EDKCNKTPCEHGGKCIT 60
++ C + PCE+ KC++
Sbjct: 1367 DNVCLREPCENYMKCVS 1383
Score = 40 (19.1 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 266 QPCGSGSCVPLYDGYKCVCT-QSCKESHLTEVMC 298
+P GS SC+P D Y T +SC H + C
Sbjct: 2058 RPRGSDSCLPC-DCYPVGSTSRSCAP-HSGQCPC 2089
>MGI|MGI:2136343 [details] [associations]
symbol:Crb1 "crumbs homolog 1 (Drosophila)" species:10090
"Mus musculus" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0005902 "microvillus" evidence=IDA]
[GO:0007009 "plasma membrane organization" evidence=IMP]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016044 "cellular membrane
organization" evidence=IMP] [GO:0042462 "eye photoreceptor cell
development" evidence=IMP] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 MGI:MGI:2136343
GO:GO:0016021 GO:GO:0005886 GO:GO:0007009 GO:GO:0005509
EMBL:CH466520 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 eggNOG:NOG12793 InterPro:IPR001791
SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025 GO:GO:0005902
EMBL:AL606536 Pfam:PF02210 GO:GO:0042462 Pfam:PF12661 KO:K16681
CTD:23418 HOVERGEN:HBG080001 OrthoDB:EOG4VX24C EMBL:AF406641
EMBL:AY450552 EMBL:AF492496 EMBL:AK044345 EMBL:AK044704
EMBL:AC116810 EMBL:AC138741 IPI:IPI00128647 IPI:IPI00402927
IPI:IPI00607975 IPI:IPI00608061 RefSeq:NP_573502.2 UniGene:Mm.95700
ProteinModelPortal:Q8VHS2 SMR:Q8VHS2 STRING:Q8VHS2
PhosphoSite:Q8VHS2 PRIDE:Q8VHS2 DNASU:170788
Ensembl:ENSMUST00000059825 GeneID:170788 KEGG:mmu:170788
UCSC:uc007cwe.1 UCSC:uc007cwf.1 GeneTree:ENSGT00690000101660
HOGENOM:HOG000230899 InParanoid:Q8VHS2 NextBio:370423 Bgee:Q8VHS2
CleanEx:MM_CRB1 Genevestigator:Q8VHS2 GermOnline:ENSMUSG00000063681
Uniprot:Q8VHS2
Length = 1405
Score = 150 (57.9 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 83/353 (23%), Positives = 146/353 (41%)
Query: 47 CNKTPCEHGGKCIT--TPGSS--YCLCPLGFTGDLCQTRLDLQVPQFNGSSYLR---YQG 99
C C + GKCI G C C G+ G LC+T L NG ++ + G
Sbjct: 444 CTHHQCLNNGKCIPHFQNGQHGFTCQCLSGYAGPLCETVTTLSFGS-NGFLWVTSGSHTG 502
Query: 100 LGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATL 159
+G + ++++ F ++PN +LL G++ V + L L + V + ++ L
Sbjct: 503 IGPE----CNISLRFHTVQPNALLLIRGNK--DVS--MKLELLNGCVHLSIEVWNQLKVL 554
Query: 160 RS-SNPISLGEWHKLRLTRTGRHAYLQV-----DRFPSSQILSPGPFTQXXXXXXXXXGG 213
S S+ S GEWH + +T V ++ + + GG
Sbjct: 555 LSISHNTSDGEWHFVEVTIAETLTLALVGGSCKEKCTTKSSVPVENHQSICALQDSFLGG 614
Query: 214 VP---DYNIVSP----KVKIKSSFIGCIQKVLIN-NH-ELNILGEAIQGVNVVNCAHP-- 262
+P N VS V SF+GC+Q + + NH L + + C
Sbjct: 615 LPMGTANNSVSVLNIYNVPSTPSFVGCLQDIRFDLNHITLENVSSGLSSNVKAGCLGKDW 674
Query: 263 CITQPCGS-GSCVPLYDGYKCVCTQSCKESH-LTEVMCASFDHGASFLHYLDPEIIHSSG 320
C +QPC + G C+ L+ GY+C C + S+ L E + F D S+G
Sbjct: 675 CESQPCQNRGRCINLWQGYQCECDRPYTGSNCLKEYVAGRFGQD-------D-----STG 722
Query: 321 LLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNG 373
+ F ++ ++ G F++ M ++T GL+L +S + ++++ + +G
Sbjct: 723 --YAAFSVNDNY---GQNFSLSMFVRTRQPLGLLLALENS-TYQYVSVWLEHG 769
Score = 146 (56.5 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 107/508 (21%), Positives = 195/508 (38%)
Query: 42 CL-EDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLC-QTRLDLQVPQFNGSSYLRYQG 99
CL +D C PC++ G+CI C C +TG C + + + Q + + Y +
Sbjct: 669 CLGKDWCESQPCQNRGRCINLWQGYQCECDRPYTGSNCLKEYVAGRFGQDDSTGYAAFS- 727
Query: 100 LGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGT-GAAT 158
+ + Y L++ + +P G+LL + +++++L + L T G+
Sbjct: 728 VNDNYGQNFSLSMFVRTRQPLGLLLA---LENSTYQYVSVWLEHG----SLALQTPGSPK 780
Query: 159 LRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILS--PGPFTQXXXXXXXXXGGVPD 216
+ +S G H + L R +++ + SSQ L P GG+PD
Sbjct: 781 FMVNFFLSDGNVHLISL----RIKPNEIELYQSSQNLGFISVPTWTIRRGDVIFIGGLPD 836
Query: 217 YNIVSPKVKIKSSFI-GCIQKVLINNHELNILGEAIQG-------VNVVN-CA--HPCIT 265
K ++ F GC+Q V +N+ L + VNV C + C +
Sbjct: 837 RE----KTEVYGGFFKGCVQDVRLNSQTLEFFPNSTNNAYDDPILVNVTQGCPGDNTCKS 892
Query: 266 QPCGSGS-CVPLYDGYKCVCTQSCKESHLTEVM-CASFDHGASFLHYLDPE----IIHS- 318
PC +G C L+D + C C + +V C + L P+ I ++
Sbjct: 893 NPCHNGGVCHSLWDDFSCSCPTNTAGRACEQVQWCQLSPCPPTAECQLLPQGFECIANAV 952
Query: 319 -SGLLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHV 377
SGL + + IT NI +T ++ +IL + + +FL + I +
Sbjct: 953 FSGLSR-EILFRSNGNITRELTNITFAFRTHDTNVMILH--AEKEPEFLNISIQDARLFF 1009
Query: 378 MYXXXXXXXXXXXXQTK-INNGVWHRLTVHRNFMVVMHGSSHTRSNKSSKIEFKCLSIQR 436
++ +N+G WH++T V +S + + + F +
Sbjct: 1010 QLRSGNSFYTLHLMGSQLVNDGTWHQVTFSMIDPVAQ--TSRWQMEVNDQTPFVISEVA- 1066
Query: 437 LHRTGKQCLIRIDTDYSM--QSISGGKFEQ--LNTDS--GLYVGGVEDIEELTRSKYHHS 490
TG ++ +TD + QS+ K Q L+T G+Y+ E++
Sbjct: 1067 ---TGSLNFLKDNTDIYVGDQSVDNPKGLQGCLSTIEIGGIYLSYFENLHGFPGKPQEEQ 1123
Query: 491 FKGWISNLILSNDYQVKLPLSRSQGSSC 518
F +N++L+ LP + S C
Sbjct: 1124 FLKVSTNMVLTGC----LPSNACHSSPC 1147
Score = 98 (39.6 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 16/44 (36%), Positives = 22/44 (50%)
Query: 37 GRSKECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQT 80
G + E + C C+HGG C P C+CP G+ G C+T
Sbjct: 103 GLNCETATNSCGGNLCQHGGTCRKDPEHPVCICPPGYAGRFCET 146
Score = 92 (37.4 bits), Expect = 4.2e-11, Sum P(2) = 4.2e-11
Identities = 15/35 (42%), Positives = 18/35 (51%)
Query: 45 DKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQ 79
D+C PC HG C PG C C GF G+ C+
Sbjct: 225 DECRSQPCLHGATCQDAPGGYSCDCAPGFLGEHCE 259
Score = 89 (36.4 bits), Expect = 8.6e-11, Sum P(2) = 8.6e-11
Identities = 17/45 (37%), Positives = 25/45 (55%)
Query: 40 KEC--LEDKCNKTPCEHGGKCITTPGSS--YCLCPLGFTGDLCQT 80
K+C L+D C +PC+ C+ PG C CP G++G C+T
Sbjct: 64 KDCEDLKDPCFSSPCQGIATCVKIPGEGNFLCQCPPGYSGLNCET 108
Score = 88 (36.0 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 18/49 (36%), Positives = 25/49 (51%)
Query: 37 GRSKECLEDKCNKTPCEHGGKCITTPGSSYCLCP-LGFTGDLCQTRLDL 84
G E ++C PC HGG C+ S +C C GFTG C++ + L
Sbjct: 255 GEHCELSVNECESQPCLHGGLCVDGRNSYHCDCTGSGFTGMHCESLIPL 303
Score = 85 (35.0 bits), Expect = 6.1e-10, Sum P(2) = 6.1e-10
Identities = 15/48 (31%), Positives = 25/48 (52%)
Query: 36 KGRSKECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLD 83
+GR + D+C PC++ C+ G C+CP F+G C+ +D
Sbjct: 178 QGRHCDLEVDECVSDPCKNEAVCLNEIGRYTCVCPQEFSGVNCELEID 225
Score = 83 (34.3 bits), Expect = 9.8e-10, Sum P(2) = 9.8e-10
Identities = 18/52 (34%), Positives = 24/52 (46%)
Query: 32 GNKIKGRSKECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLD 83
G+ G E L C PC + C T S C C G+TG LC+T ++
Sbjct: 289 GSGFTGMHCESLIPLCWSKPCHNDATCEDTVDSYICHCRPGYTGALCETDIN 340
Score = 72 (30.4 bits), Expect = 4.9e-09, Sum P(2) = 4.9e-09
Identities = 13/30 (43%), Positives = 16/30 (53%)
Query: 45 DKCNKTPCEHGGKCITTPGSSYCLCPLGFT 74
D+C PC +GG C PG+ C CP T
Sbjct: 398 DECLLHPCLNGGTCENLPGNYACHCPFDDT 427
Score = 71 (30.1 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 14/47 (29%), Positives = 20/47 (42%)
Query: 37 GRSKECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLD 83
GR E ++C +PC +G C C C G+ G C +D
Sbjct: 141 GRFCETDHNECASSPCHNGAMCQDGINGYSCFCVPGYQGRHCDLEVD 187
Score = 46 (21.3 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 5/15 (33%), Positives = 11/15 (73%)
Query: 45 DKCNKTPCEHGGKCI 59
++C+ PC+ G+C+
Sbjct: 340 NECSSNPCQFWGECV 354
Score = 46 (21.3 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06
Identities = 13/45 (28%), Positives = 21/45 (46%)
Query: 46 KCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQFN 90
+C PC++ C P + C C L +L + DL+ P F+
Sbjct: 33 RCLSGPCQNNSTCKHFPQDNNC-C-LDTANNLDKDCEDLKDPCFS 75
>UNIPROTKB|F1N3A5 [details] [associations]
symbol:CRB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042462 "eye photoreceptor cell development"
evidence=IEA] [GO:0007009 "plasma membrane organization"
evidence=IEA] [GO:0005902 "microvillus" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005509 "calcium ion binding"
evidence=IEA] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 Pfam:PF07645 PROSITE:PS01187
PROSITE:PS50026 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005886 GO:GO:0007009 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186
InterPro:IPR001791 SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025
GO:GO:0005902 Pfam:PF02210 GO:GO:0042462 Pfam:PF12661 OMA:QYIRVWL
GeneTree:ENSGT00690000101660 EMBL:DAAA02043890 EMBL:DAAA02043891
EMBL:DAAA02043892 EMBL:DAAA02043893 EMBL:DAAA02043894
EMBL:DAAA02043895 EMBL:DAAA02043896 IPI:IPI00905795
UniGene:Bt.62177 Ensembl:ENSBTAT00000033880 NextBio:20873098
Uniprot:F1N3A5
Length = 1408
Score = 163 (62.4 bits), Expect = 1.1e-11, Sum P(3) = 1.1e-11
Identities = 83/352 (23%), Positives = 140/352 (39%)
Query: 47 CNKTPCEHGGKCITTPGSSY----CLCPLGFTGDLCQTRLDLQVPQFNGSSYLRYQGLGE 102
C PC + G C+ CLCP G+TG C T L F GS +L + G
Sbjct: 445 CADHPCLNNGTCVPHVHDGQHGFDCLCPPGYTGSRCGTVTTLS---FLGSGFL-WVSSGS 500
Query: 103 QYLSLLDLTIV--FKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGA-ATL 159
T+ F+ ++P +LL+ G R F+ L + +V T + L
Sbjct: 501 ALAQDSGCTVALRFQTVQPAALLLFRGDR----DVFVMLEVLAGFVHLTVQVSDRPKVVL 556
Query: 160 RSSNPISLGEWHKLRLTRTGRHAY-LQVDRFPSSQIL-SPGPFTQXXXXX----XXXXGG 213
+ S G WH + T L+ D + + +P PF GG
Sbjct: 557 LIPHDTSDGGWHAVEATFAEAVTLALRDDSCMGTCVARAPSPFESDGSSACALQNSFLGG 616
Query: 214 VPDYNIVSPKV-----KIKS--SFIGCIQKVLINNHELNILG-EAIQGVNV-VNCAHP-- 262
+P+ S +I S S +GC+Q V ++++ + + Q +NV CA
Sbjct: 617 LPEGRAHSGDALLNVYRIPSAPSLVGCLQDVHLDSNAITAENVSSDQSLNVKAGCARKDW 676
Query: 263 CITQPCGS-GSCVPLYDGYKCVCTQSCKESHLTEVMCASFDHGASFLHYLDPEIIHSSGL 321
C +QPC + G C+ L+ G++C C + + C HG Y+
Sbjct: 677 CESQPCRNRGRCLNLWLGHRCECYRPYRGRS-----C----HG----EYVAGRFGQDDSP 723
Query: 322 LHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNG 373
+ F L+ D+ + + M ++T +GL+L G+ + +L + + +G
Sbjct: 724 GYAVFHLNKDYE---EDLTLSMFVRTRRPTGLLLALGNG-TYQYLRVWLEHG 771
Score = 142 (55.0 bits), Expect = 2.0e-08, Sum P(3) = 2.0e-08
Identities = 86/390 (22%), Positives = 150/390 (38%)
Query: 44 EDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDL-QVPQFNGSSYLRYQGLGE 102
+D C PC + G+C+ C C + G C + Q + Y + L +
Sbjct: 674 KDWCESQPCRNRGRCLNLWLGHRCECYRPYRGRSCHGEYVAGRFGQDDSPGYAVFH-LNK 732
Query: 103 QYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSS 162
Y L L++ + P G+LL G+ G ++ ++L + L G+ L +
Sbjct: 733 DYEEDLTLSMFVRTRRPTGLLLALGN---GTYQYLRVWLEHGRLAM---LTPGSPKLLVT 786
Query: 163 NPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILS--PGPFTQXXXXXXXXXGGVPDYNIV 220
+S G +RL + +++ + SSQ L P + GG+PD
Sbjct: 787 FVLSDGN---VRLVSL-KIKPNKIELYESSQNLGFLSAPTWKLQRGDVLYVGGLPDRR-- 840
Query: 221 SPKVKIKSSFI-GCIQKVLINNHEL----NILGEAIQGVNVVNCAH--P----CITQPCG 269
+ ++ F GCIQ + +NN L N A +VN P C PC
Sbjct: 841 --ETEVSGGFFKGCIQDMRLNNENLEFFPNPTSSAAHNAVLVNVTEGCPGDNLCEPNPCH 898
Query: 270 SGS-CVPLYDGYKCVCT-----QSCKESHLTEVMCASFDHGASFLHYLDPEIIHSSGLLH 323
G C PL+D + C C ++C+E E+ GA L P
Sbjct: 899 HGGICYPLWDDFSCSCPVNTAGKACQELRWCEL--GPCPPGAQCLRL--PRGFECIANAV 954
Query: 324 YKFQLH-VDFRITGY---EF-NIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVM 378
+ Q + FR G E N+ +T + +IL + + +FL + I + + ++
Sbjct: 955 FNGQSREIIFRSNGNITRELTNVTFGFRTRDAHAIILH--AEKEPEFLRIHIQD--SRLL 1010
Query: 379 YXXXXXXXXXXXXQTK---INNGVWHRLTV 405
+ T +++GVW+++T+
Sbjct: 1011 FQLRSGNSFYTLSLTSLQPVSDGVWYQVTI 1040
Score = 80 (33.2 bits), Expect = 1.1e-11, Sum P(3) = 1.1e-11
Identities = 18/45 (40%), Positives = 21/45 (46%)
Query: 40 KEC--LEDKCNKTPCEHGGKCITTPGS--SYCLCPLGFTGDLCQT 80
K+C ED C +PC C PG S C CP G +G C T
Sbjct: 65 KDCGEEEDPCLSSPCPGHATCARVPGERRSRCRCPPGHSGAGCDT 109
Score = 76 (31.8 bits), Expect = 5.0e-08, Sum P(3) = 5.0e-08
Identities = 17/52 (32%), Positives = 22/52 (42%)
Query: 32 GNKIKGRSKECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLD 83
G+ G E L C PC + C + C C G+TG C+T LD
Sbjct: 290 GSGFTGTRCETLLPPCWSEPCHNNAICEDSADRYTCRCRPGYTGAQCETDLD 341
Score = 72 (30.4 bits), Expect = 6.9e-11, Sum P(3) = 6.9e-11
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 45 DKCNKTPCEHGGKCITTPGSSYCLCP 70
D+C +PC +GG C +P C CP
Sbjct: 399 DECLSSPCRNGGTCENSPEGYTCHCP 424
Score = 53 (23.7 bits), Expect = 5.7e-09, Sum P(3) = 5.7e-09
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 45 DKCNKTPCEHGGKCI 59
D C PC+ GG+C+
Sbjct: 341 DGCGSGPCQAGGRCV 355
Score = 49 (22.3 bits), Expect = 1.1e-11, Sum P(3) = 1.1e-11
Identities = 14/33 (42%), Positives = 19/33 (57%)
Query: 471 LYVGGVEDIEELTRSKYHHSFKGWISNLILSND 503
LYVGG+ D E S FKG I ++ L+N+
Sbjct: 831 LYVGGLPDRRETEVSGGF--FKGCIQDMRLNNE 861
Score = 39 (18.8 bits), Expect = 1.1e-10, Sum P(3) = 1.1e-10
Identities = 12/49 (24%), Positives = 24/49 (48%)
Query: 456 SISGGKFEQLNTDSGLYVGGVEDIEELTRSKYHHSFKGWISNLILSNDY 504
+++ G L D+ +YVG + + TR+ +G +S + +S Y
Sbjct: 1066 AVAAGSLSFLKDDTDVYVG--DRASDSTRA-----LRGCLSTIAISGLY 1107
Score = 38 (18.4 bits), Expect = 0.00029, Sum P(3) = 0.00029
Identities = 11/38 (28%), Positives = 14/38 (36%)
Query: 44 EDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTR 81
+D C T + GSS C F G L + R
Sbjct: 584 DDSCMGTCVARAPSPFESDGSSACALQNSFLGGLPEGR 621
>UNIPROTKB|E2R4F0 [details] [associations]
symbol:CELSR2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0021591 "ventricular system development"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0004930 "G-protein coupled
receptor activity" evidence=IEA] [GO:0007218 "neuropeptide
signaling pathway" evidence=IEA] [GO:0007156 "homophilic cell
adhesion" evidence=IEA] [GO:0005509 "calcium ion binding"
evidence=IEA] InterPro:IPR000203 InterPro:IPR000742
InterPro:IPR000832 InterPro:IPR001368 InterPro:IPR001879
InterPro:IPR001881 InterPro:IPR002126 InterPro:IPR015919
InterPro:IPR017981 InterPro:IPR020894 Pfam:PF00002 Pfam:PF00008
Pfam:PF00028 Pfam:PF01825 PRINTS:PR00205 PRINTS:PR00249
PROSITE:PS00232 PROSITE:PS50026 PROSITE:PS50221 PROSITE:PS50227
PROSITE:PS50261 PROSITE:PS50268 SMART:SM00008 SMART:SM00112
SMART:SM00179 SMART:SM00181 SMART:SM00208 SMART:SM00303
InterPro:IPR000152 GO:GO:0016021 GO:GO:0005886 GO:GO:0001764
GO:GO:0004930 GO:GO:0007218 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 SMART:SM00180
SMART:SM00282 PROSITE:PS00010 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 GO:GO:0007156 SUPFAM:SSF49313 InterPro:IPR022624
Pfam:PF12003 Gene3D:2.60.40.60 GeneTree:ENSGT00700000104170
Pfam:PF02210 CTD:1952 KO:K04601 OMA:YILRAYA EMBL:AAEX03004736
RefSeq:XP_537042.2 ProteinModelPortal:E2R4F0
Ensembl:ENSCAFT00000031564 GeneID:479916 KEGG:cfa:479916
NextBio:20855025 Uniprot:E2R4F0
Length = 2926
Score = 213 (80.0 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 76/265 (28%), Positives = 115/265 (43%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQ-FNGSSYLRYQGLGEQYL 105
C+ + C +GG C+ + C CPLGF G C ++ PQ F GSS + + GL
Sbjct: 1581 CDSSTCNNGGTCVNQWDAFSCECPLGFGGKSCAQ--EMANPQRFLGSSLVAWHGLSLPIS 1638
Query: 106 SLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTG--AATLR-SS 162
L+++F+ + NG+LL R I L L + +V + + GTG A++L+
Sbjct: 1639 QPWHLSLMFRTRQANGVLLQAVTRGRST---ITLQLREGHVVLSVE-GTGLQASSLQLEP 1694
Query: 163 NPISLGEWH--KLRLTRTGR--HAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYN 218
+ G+WH +L L +G HA L D + GP GGVP
Sbjct: 1695 GRANDGDWHHAQLALGASGGPGHAILSFDYGQQRAEGNLGPRLHGLHLSNITVGGVP--- 1751
Query: 219 IVSPKVKIKSSFIGCIQKVLINNHELNILG-EAIQG--VNVV-NCA--HPCITQPCGSGS 272
P + F GC+Q V ++ + + +G VNV C+ PC + PC + S
Sbjct: 1752 --GPASGVARGFRGCLQGVRVSETSEGVSSLDPSRGESVNVEPGCSLPDPCDSNPCPANS 1809
Query: 273 -CVPLYDGYKCVCTQSCKESHLTEV 296
C +D Y C C + T V
Sbjct: 1810 YCSDDWDSYSCSCDPGYYGDNCTNV 1834
Score = 161 (61.7 bits), Expect = 9.2e-11, Sum P(2) = 9.2e-11
Identities = 43/134 (32%), Positives = 66/134 (49%)
Query: 46 KCNKTPCEHGGKCITT-PGSSYCLCPLG-FTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQ 103
+C C++GG C+ G C CP G F CQ + F S++ ++GL ++
Sbjct: 1334 RCTPGVCKNGGTCVNLLVGGFKCDCPSGDFEKPYCQ----VTTRSFPAHSFITFRGLRQR 1389
Query: 104 YLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSN 163
+ L L+ K E +G+LLYNG R + DF+AL + V TF G T+
Sbjct: 1390 FHFTLALSFATK--ERDGLLLYNG-RFNEKHDFVALEVIQEQVQLTFSAGESTTTVSPFV 1446
Query: 164 P--ISLGEWHKLRL 175
P +S G+WH ++L
Sbjct: 1447 PGGVSDGQWHTVQL 1460
Score = 84 (34.6 bits), Expect = 9.2e-11, Sum P(2) = 9.2e-11
Identities = 20/77 (25%), Positives = 38/77 (49%)
Query: 212 GGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNCA---HPCITQPC 268
GGVPD P V+ + F+GC++ + +++ +++ V C + C + C
Sbjct: 1529 GGVPDLPESFP-VRTRH-FVGCMRNLQVDSRHVDMADFVANNGTVPGCPAKKNVCDSSTC 1586
Query: 269 GSG-SCVPLYDGYKCVC 284
+G +CV +D + C C
Sbjct: 1587 NNGGTCVNQWDAFSCEC 1603
Score = 52 (23.4 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 13/34 (38%), Positives = 16/34 (47%)
Query: 258 NCAHPCITQPCGSGS-CV--PLYD-GYKCVCTQS 287
NC + C PC S C+ P GY C C Q+
Sbjct: 1830 NCTNVCDLNPCEHQSVCIRKPSAPHGYTCECPQN 1863
Score = 38 (18.4 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 5/14 (35%), Positives = 10/14 (71%)
Query: 47 CNKTPCEHGGKCIT 60
C + PCE+ +C++
Sbjct: 1235 CLREPCENYMRCVS 1248
>UNIPROTKB|F1NLI2 [details] [associations]
symbol:F1NLI2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004872 "receptor activity" evidence=IEA]
[GO:0007268 "synaptic transmission" evidence=IEA] [GO:0007416
"synapse assembly" evidence=IEA] InterPro:IPR000742
InterPro:IPR027149 PROSITE:PS50026 SMART:SM00181 InterPro:IPR000152
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 InterPro:IPR001791 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 Pfam:PF02210 GeneTree:ENSGT00560000076996
PANTHER:PTHR10127:SF405 EMBL:AADN02003517 EMBL:AADN02003518
EMBL:AADN02003519 EMBL:AADN02003520 EMBL:AADN02003521
EMBL:AADN02003522 EMBL:AADN02003523 EMBL:AADN02003524
EMBL:AADN02003525 EMBL:AADN02003526 EMBL:AADN02003527
EMBL:AADN02003528 EMBL:AADN02003529 EMBL:AADN02003530
EMBL:AADN02003531 EMBL:AADN02003532 EMBL:AADN02003533
EMBL:AADN02003534 EMBL:AADN02003535 EMBL:AADN02003536
EMBL:AADN02003537 EMBL:AADN02003538 EMBL:AADN02003539
IPI:IPI00681032 Ensembl:ENSGALT00000017123 ArrayExpress:F1NLI2
Uniprot:F1NLI2
Length = 861
Score = 157 (60.3 bits), Expect = 1.3e-11, Sum P(3) = 1.3e-11
Identities = 45/168 (26%), Positives = 79/168 (47%)
Query: 83 DLQVPQFNGSSYLRYQGLGEQYLSLLD-LTIVFKAIEPNGILLYNGHRADGVGDFIALYL 141
D + F GS YL Y S D +T+ FK + NG++L+ G AD ++ L L
Sbjct: 10 DENMATFRGSEYLCYDLSQNPIQSSSDEITLSFKTWQRNGLILHTGKSAD----YVNLAL 65
Query: 142 NDRYVDFTFDLGTGA--ATLRSSN-PISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPG 198
D V +LG+GA A + N + WH +++TR R + VD ++ +
Sbjct: 66 KDGAVSLVINLGSGAFEAIVEPVNGKFNDNAWHDVKVTRNLRQVTISVDGILTTTGYTQE 125
Query: 199 PFTQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNI 246
+T GG P + P + ++F+GC+++V+ N+++ +
Sbjct: 126 DYTMLGSDDFFYVGGSPSTADL-PGSPVSNNFMGCLKEVVYKNNDIRL 172
Score = 147 (56.8 bits), Expect = 1.0e-05, Sum P(3) = 1.0e-05
Identities = 44/163 (26%), Positives = 76/163 (46%)
Query: 92 SSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFD 151
SSYL L + Y S+ L FK +G +L+N DG DFIA+ L Y+ + FD
Sbjct: 634 SSYLSLATL-QAYTSM-HLFFQFKTTSADGFILFNS--GDG-NDFIAVELVKGYIHYVFD 688
Query: 152 LGTGAATLR--SSNPISLGEWHKLRLTRTGRHAY-LQVDRFPSSQILSPGPFTQXXXXXX 208
LG G ++ S P++ +WH + +TR + + L+VD +Q+++
Sbjct: 689 LGNGPNVIKGNSDRPLNDNQWHNVVITRDNSNTHSLKVDTKMVTQVINGAKNLDLKGDLY 748
Query: 209 XXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAI 251
Y+ + V + F GC+ V +N +++ +A+
Sbjct: 749 IAGLAQGMYSNLPKLVASRDGFQGCLASVDLNGRLPDLINDAL 791
Score = 133 (51.9 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 71/329 (21%), Positives = 131/329 (39%)
Query: 114 FKAIEPNGILLY-NG---HRADGVG------DFIALYLNDRYVDFTFDLGTGAATLRSSN 163
F+ EPNG++L+ +G R D DF A+ L D + D+G+G ++++
Sbjct: 230 FRTTEPNGLILFTHGKPQERKDARSQKNTKVDFFAVELLDGNLYLLLDMGSGTIKVKATQ 289
Query: 164 P-ISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYN--IV 220
+ GEW+ + + R GR + V+ + + G GG+P+ ++
Sbjct: 290 KKANDGEWYHVDIQRDGRSGTISVNS-RRTPFTASGESEILDLEGDMYLGGLPENRAGLI 348
Query: 221 SPK----VKIKSSFIGCIQKVLINNHELNI--LGEAIQGVNVVN-CAH----PCITQPCG 269
P + ++GCI+ + I+ NI L EA V + C+ C + PC
Sbjct: 349 LPTELWTAMLNYGYVGCIRDLFIDGRSKNIRQLAEAQNAAGVKSSCSRLSTKQCDSYPCK 408
Query: 270 SGS-CVPLYDGYKCVCTQSCKESHLTE--VMCASFDHGASFLHYLDPEIIHSSGLLHYKF 326
+ + C ++ + C CT + E S+D G+ ++ + P ++H+
Sbjct: 409 NNAVCKDGWNRFICDCTGTGYWGRTCEREASILSYD-GSMYMKIIMPMVMHTEA------ 461
Query: 327 QLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXX 386
E ++ R + + GL++ T S S D L L + G +M
Sbjct: 462 -----------E-DVSFRFMSQRAYGLLMATTSRDSADTLRLELDGGRVKLMVNLDCIRI 509
Query: 387 XXXXXQ--------TKINNGVWHRLTVHR 407
+ K+N+ WH + V R
Sbjct: 510 NCNASKGPETLYAGQKLNDNEWHTVRVVR 538
Score = 120 (47.3 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
Identities = 52/224 (23%), Positives = 90/224 (40%)
Query: 28 QLNDGNKIKGRSKEC--LEDK-CNKTPCEHGGKCITTPGSSYCLCP-LGFTGDLCQTRLD 83
QL + G C L K C+ PC++ C C C G+ G C+ +
Sbjct: 380 QLAEAQNAAGVKSSCSRLSTKQCDSYPCKNNAVCKDGWNRFICDCTGTGYWGRTCER--E 437
Query: 84 LQVPQFNGSSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHR--ADGV-----GDF 136
+ ++GS Y++ + D++ F + G+L+ R AD + G
Sbjct: 438 ASILSYDGSMYMKIIMPMVMHTEAEDVSFRFMSQRAYGLLMATTSRDSADTLRLELDGGR 497
Query: 137 IALYLNDRYVDFTFDLGTGAATLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILS 196
+ L +N + + G TL + ++ EWH +R+ R G+ L VD + +
Sbjct: 498 VKLMVNLDCIRINCNASKGPETLYAGQKLNDNEWHTVRVVRRGKSLKLMVDDDVAEGTMV 557
Query: 197 PGPFTQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLIN 240
G T+ G + + +S I SSFIG +Q ++ N
Sbjct: 558 -GDHTRLEFHNIET-GIMTEKRYISV---IPSSFIGHLQSLMFN 596
Score = 79 (32.9 bits), Expect = 1.3e-11, Sum P(3) = 1.3e-11
Identities = 17/66 (25%), Positives = 32/66 (48%)
Query: 344 RIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTK-INNGVWHR 402
+ KT+S+ G IL+ S DF+A+ + GY H ++ + +N+ WH
Sbjct: 653 QFKTTSADGFILFN-SGDGNDFIAVELVKGYIHYVFDLGNGPNVIKGNSDRPLNDNQWHN 711
Query: 403 LTVHRN 408
+ + R+
Sbjct: 712 VVITRD 717
Score = 64 (27.6 bits), Expect = 1.7e-10, Sum P(3) = 1.7e-10
Identities = 19/81 (23%), Positives = 36/81 (44%)
Query: 340 NIDMRIKTSSSSGLILWT-GSSQSK-----------DFLALGIHNGYAHVMYXXXXXXXX 387
+I +T+ +GLIL+T G Q + DF A+ + +G +++
Sbjct: 225 SISFDFRTTEPNGLILFTHGKPQERKDARSQKNTKVDFFAVELLDGNLYLLLDMGSGTIK 284
Query: 388 XXXXQTKINNGVWHRLTVHRN 408
Q K N+G W+ + + R+
Sbjct: 285 VKATQKKANDGEWYHVDIQRD 305
Score = 52 (23.4 bits), Expect = 1.7e-10, Sum P(3) = 1.7e-10
Identities = 21/101 (20%), Positives = 49/101 (48%)
Query: 437 LHRTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVEDIE-------ELTRSKYHH 489
+ R G+ I +++ + + SG + E L+ + +Y+GG+ + EL + ++
Sbjct: 302 IQRDGRSGTISVNSRRTPFTASG-ESEILDLEGDMYLGGLPENRAGLILPTELWTAMLNY 360
Query: 490 SFKGWISNLILSNDYQVKLPLSRSQGSS-CQLTCETLNTGQ 529
+ G I +L + + L+ +Q ++ + +C L+T Q
Sbjct: 361 GYVGCIRDLFIDGRSKNIRQLAEAQNAAGVKSSCSRLSTKQ 401
Score = 48 (22.0 bits), Expect = 1.3e-11, Sum P(3) = 1.3e-11
Identities = 16/59 (27%), Positives = 31/59 (52%)
Query: 446 IRIDTDYSMQSISGGKFEQLNTD---SGLYVGGVEDIEELTRSKYHHSFKGWISNLILS 501
+++DT Q I+G K L D +GL G ++ +L S+ F+G ++++ L+
Sbjct: 724 LKVDTKMVTQVINGAKNLDLKGDLYIAGLAQGMYSNLPKLVASR--DGFQGCLASVDLN 780
Score = 41 (19.5 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 7/26 (26%), Positives = 13/26 (50%)
Query: 263 CITQPCGS-GSCVPLYDGYKCVCTQS 287
C C + G C ++G+ C C+ +
Sbjct: 820 CQEDSCANQGICNQQWEGFTCDCSMT 845
Score = 38 (18.4 bits), Expect = 1.0e-05, Sum P(3) = 1.0e-05
Identities = 7/21 (33%), Positives = 13/21 (61%)
Query: 11 DDWNTVRVFRHRWDAWIQLND 31
++W+TVRV R + ++D
Sbjct: 529 NEWHTVRVVRRGKSLKLMVDD 549
>UNIPROTKB|D4ABC1 [details] [associations]
symbol:Celsr2 "Cadherin EGF LAG seven-pass G-type receptor
2" species:10116 "Rattus norvegicus" [GO:0004930 "G-protein coupled
receptor activity" evidence=IEA] [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007218 "neuropeptide signaling pathway" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR000203
InterPro:IPR000742 InterPro:IPR000832 InterPro:IPR001368
InterPro:IPR001879 InterPro:IPR001881 InterPro:IPR017981
Pfam:PF00002 Pfam:PF00008 Pfam:PF01825 PRINTS:PR00249
PROSITE:PS50026 PROSITE:PS50221 PROSITE:PS50227 PROSITE:PS50261
SMART:SM00008 SMART:SM00179 SMART:SM00181 SMART:SM00208
SMART:SM00303 InterPro:IPR000152 RGD:69237 GO:GO:0016021
GO:GO:0005886 GO:GO:0004930 GO:GO:0007218 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS00010 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 InterPro:IPR022624 Pfam:PF12003
Pfam:PF02210 OrthoDB:EOG4KKZ23 IPI:IPI00779219
ProteinModelPortal:D4ABC1 Ensembl:ENSRNOT00000055873
ArrayExpress:D4ABC1 Uniprot:D4ABC1
Length = 1553
Score = 207 (77.9 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 75/265 (28%), Positives = 113/265 (42%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQ-FNGSSYLRYQGLGEQYL 105
C+ C +GG C+ + C CPLGF G C ++ PQ F GSS + + GL
Sbjct: 443 CDSNTCHNGGTCVNQWDAFSCECPLGFGGKSCAQ--EMANPQRFLGSSLVAWHGLSLPIS 500
Query: 106 SLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTG--AATLR-SS 162
L+++F+ + +G+LL R I L L +V + + GTG A++LR
Sbjct: 501 QPWHLSLMFRTRQADGVLLQAVTRGRST---ITLQLRAGHVVLSVE-GTGLQASSLRLEP 556
Query: 163 NPISLGEWH--KLRLTRTGR--HAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYN 218
+ G+WH +L L +G HA L D + GP GGVP
Sbjct: 557 GRANDGDWHHAQLSLGASGGPGHAILSFDYGQQKAEGNLGPRLHGLHLSNMTVGGVP--- 613
Query: 219 IVSPKVKIKSSFIGCIQKVLINNHELNILG-EAIQG--VNVV-NCA--HPCITQPCGSGS 272
P + F GC+Q V ++ + + +G +NV C+ PC + PC + S
Sbjct: 614 --GPASSVARGFRGCLQGVRVSETPEGVSSLDPSRGESINVEPGCSWPDPCDSNPCPTNS 671
Query: 273 -CVPLYDGYKCVCTQSCKESHLTEV 296
C +D Y C C + T V
Sbjct: 672 YCSNDWDSYSCSCDPGYYGDNCTNV 696
Score = 162 (62.1 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 43/134 (32%), Positives = 66/134 (49%)
Query: 46 KCNKTPCEHGGKCITT-PGSSYCLCPLG-FTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQ 103
+C C++GG C+ G C CP G F CQ + F S++ ++GL ++
Sbjct: 196 RCTPGVCKNGGTCVNLLVGGFKCDCPSGDFEKPFCQ----VTTRSFPARSFITFRGLRQR 251
Query: 104 YLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSN 163
+ L L+ K E +G+LLYNG R + DF+AL + V TF G T+
Sbjct: 252 FHFTLALSFATK--ERDGLLLYNG-RFNEKHDFVALEVIQEQVQLTFSAGESTTTVSPFV 308
Query: 164 P--ISLGEWHKLRL 175
P +S G+WH ++L
Sbjct: 309 PGGVSDGQWHTVQL 322
Score = 84 (34.6 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 20/77 (25%), Positives = 38/77 (49%)
Query: 212 GGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNCA---HPCITQPC 268
GGVPD P V+++ F+GC++ + +++ +++ V C + C + C
Sbjct: 391 GGVPDLPESFP-VRMRH-FVGCMKNLQVDSRHVDMADFIANNGTVPGCPTKKNVCDSNTC 448
Query: 269 -GSGSCVPLYDGYKCVC 284
G+CV +D + C C
Sbjct: 449 HNGGTCVNQWDAFSCEC 465
Score = 42 (19.8 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 12/31 (38%), Positives = 13/31 (41%)
Query: 258 NCAHPCITQPCGSGS-CV--PLYD-GYKCVC 284
NC + C PC S C P GY C C
Sbjct: 692 NCTNVCDLNPCEHQSVCTRKPSAPHGYICEC 722
Score = 38 (18.4 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 5/14 (35%), Positives = 10/14 (71%)
Query: 47 CNKTPCEHGGKCIT 60
C + PCE+ +C++
Sbjct: 97 CLREPCENYMRCVS 110
>UNIPROTKB|F1SKK7 [details] [associations]
symbol:CELSR3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007413 "axonal fasciculation" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0004930 "G-protein coupled receptor activity"
evidence=IEA] [GO:0007218 "neuropeptide signaling pathway"
evidence=IEA] [GO:0007156 "homophilic cell adhesion" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] InterPro:IPR000203
InterPro:IPR000742 InterPro:IPR000832 InterPro:IPR001879
InterPro:IPR002126 InterPro:IPR015919 InterPro:IPR017981
InterPro:IPR017983 InterPro:IPR020894 Pfam:PF00002 Pfam:PF00008
Pfam:PF00028 Pfam:PF01825 Pfam:PF02793 PRINTS:PR00205
PRINTS:PR00249 PROSITE:PS00232 PROSITE:PS00650 PROSITE:PS50026
PROSITE:PS50221 PROSITE:PS50227 PROSITE:PS50261 PROSITE:PS50268
SMART:SM00008 SMART:SM00112 SMART:SM00181 SMART:SM00303
GO:GO:0016021 GO:GO:0005886 GO:GO:0001764 GO:GO:0004930
GO:GO:0007218 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 GO:GO:0007413
GO:GO:0007156 SUPFAM:SSF49313 InterPro:IPR022624 Pfam:PF12003
Gene3D:2.60.40.60 GeneTree:ENSGT00700000104170 Pfam:PF02210
EMBL:CU861514 EMBL:CU633242 Ensembl:ENSSSCT00000012437 OMA:PLYAPRW
Uniprot:F1SKK7
Length = 3307
Score = 166 (63.5 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 42/135 (31%), Positives = 68/135 (50%)
Query: 46 KCNKTPCEHGGKCITTPGSSY-CLCPLG--FTGDLCQTRLDLQVPQFNGSSYLRYQGLGE 102
+C C +GG C P + C CP G F G C+ + F SS++ ++GL +
Sbjct: 1472 RCVPGVCRNGGTCADGPDGGFRCQCPAGGAFEGPRCE----VAARSFPPSSFVMFRGLRQ 1527
Query: 103 QYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSS 162
++ L L++ F ++P+G+L YNG R + DF+AL L V T+ G + +
Sbjct: 1528 RFH--LTLSLSFATVQPSGLLFYNG-RLNEKHDFLALELVAGQVRLTYSTGESNTVVSPT 1584
Query: 163 NP--ISLGEWHKLRL 175
P +S G+WH + L
Sbjct: 1585 VPGGLSDGQWHTVHL 1599
Score = 159 (61.0 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 67/257 (26%), Positives = 101/257 (39%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQ-FNGSSYLRYQGLGEQYL 105
C+ PC++ G C G C CP+GF G C RL + P F G+ L + + +
Sbjct: 1720 CDSGPCKNSGFCSERWGGFSCDCPVGFGGKDC--RLTMAHPHHFRGNGTLSWDFGNDMAV 1777
Query: 106 SL-LDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAAT--LRSS 162
S+ L + F+ G+L+ +A G + L+ + T G+G A L
Sbjct: 1778 SVPWYLGLAFRTRATQGVLMQV--QA-GPHSTLLCQLDRGLLSVTVTKGSGRAAHLLLDE 1834
Query: 163 NPISLGEWHKLRLT-------RTGRHAYL-QVDRFPSSQILSPGPFTQXXXXXXXXXGGV 214
+S G WH LRL R G H + +D L+ G Q GG+
Sbjct: 1835 VTVSDGRWHDLRLELQEEPGGRRGHHVLMVSLDFSLFQDTLAVGSELQGLKVKRLHVGGL 1894
Query: 215 PDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNCAHPCI-TQPCGSGSC 273
P + + +GCIQ V + + L + + VN C+ T C SG C
Sbjct: 1895 PP----GSEEEAPQGLVGCIQGVWLGSTPLGSPA-LLPPSHRVNVEPGCVVTNACASGPC 1949
Query: 274 VP------LYDGYKCVC 284
P L+ + C C
Sbjct: 1950 PPHADCRDLWQTFSCTC 1966
Score = 88 (36.0 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 23/77 (29%), Positives = 37/77 (48%)
Query: 212 GGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNCA---HPCITQPC 268
GGVP+ P V K F+GC++ + I+ ++++ G + C H C + PC
Sbjct: 1668 GGVPNLPENFP-VSHKD-FVGCMRDLHIDGRQVDMAGFVANNGTMAGCQAKLHFCDSGPC 1725
Query: 269 -GSGSCVPLYDGYKCVC 284
SG C + G+ C C
Sbjct: 1726 KNSGFCSERWGGFSCDC 1742
Score = 42 (19.8 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 6/17 (35%), Positives = 12/17 (70%)
Query: 44 EDKCNKTPCEHGGKCIT 60
++ C + PCE+ KC++
Sbjct: 1370 DNVCLREPCENYMKCVS 1386
>UNIPROTKB|Q9DDD0 [details] [associations]
symbol:NRXN1 "Neurexin-1" species:9031 "Gallus gallus"
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005246 "calcium channel regulator activity"
evidence=IEA] [GO:0007269 "neurotransmitter secretion"
evidence=IEA] [GO:0007612 "learning" evidence=IEA] [GO:0009986
"cell surface" evidence=IEA] [GO:0030534 "adult behavior"
evidence=IEA] [GO:0033130 "acetylcholine receptor binding"
evidence=IEA] [GO:0035176 "social behavior" evidence=IEA]
[GO:0042734 "presynaptic membrane" evidence=IEA] [GO:0050839 "cell
adhesion molecule binding" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0051965 "positive
regulation of synapse assembly" evidence=IEA] [GO:0051968 "positive
regulation of synaptic transmission, glutamatergic" evidence=IEA]
[GO:0060134 "prepulse inhibition" evidence=IEA] [GO:0071625
"vocalization behavior" evidence=IEA] [GO:0090129 "positive
regulation of synapse maturation" evidence=IEA] [GO:0097104
"postsynaptic membrane assembly" evidence=IEA] [GO:0097109
"neuroligin family protein binding" evidence=IEA] [GO:0097116
"gephyrin clustering" evidence=IEA] [GO:0097118 "neuroligin
clustering" evidence=IEA] [GO:0097119 "postsynaptic density protein
95 clustering" evidence=IEA] [GO:2000463 "positive regulation of
excitatory postsynaptic membrane potential" evidence=IEA]
[GO:2000821 "regulation of grooming behavior" evidence=IEA]
InterPro:IPR000742 InterPro:IPR027158 PROSITE:PS50026 SMART:SM00181
InterPro:IPR000152 GO:GO:0016021 GO:GO:0009986 GO:GO:0046872
GO:GO:0007155 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 InterPro:IPR001791 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 Pfam:PF02210 InterPro:IPR003585 SMART:SM00294
eggNOG:NOG302266 HOGENOM:HOG000230481 HOVERGEN:HBG052670
OrthoDB:EOG41G339 PANTHER:PTHR10127:SF309 EMBL:AJ300473
IPI:IPI00571039 IPI:IPI00571531 IPI:IPI00582277 IPI:IPI00586877
IPI:IPI00596273 IPI:IPI00598025 IPI:IPI00598148 IPI:IPI00600703
IPI:IPI00812400 UniGene:Gga.212 ProteinModelPortal:Q9DDD0
SMR:Q9DDD0 STRING:Q9DDD0 InParanoid:Q9DDD0 Uniprot:Q9DDD0
Length = 1363
Score = 191 (72.3 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 85/323 (26%), Positives = 135/323 (41%)
Query: 92 SSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFD 151
+SY+ L + Y S+ L FK +G++LYN DG DFI + L Y+ + FD
Sbjct: 769 ASYVALATL-QAYTSM-HLFFQFKTTSLDGLILYNS--GDG-NDFIVVELVKGYLHYVFD 823
Query: 152 LGTGAATLR-SSN-PISLGEWHKLRLTRTGRHAY-LQVDRFPSSQILSPGPFTQXXXXXX 208
LG GA ++ SSN P++ +WH + ++R + + +++D ++Q S
Sbjct: 824 LGNGANLIKGSSNKPLNDNQWHNVMISRDTNNLHTVKIDTKITTQ--STAGARNLDLKSD 881
Query: 209 XXXGGVPDYNIVS-PK-VKIKSSFIGCIQKVLINNHELNILGEAI--QGVNVVNCAHP-- 262
GGV S PK V K F GC+ V +N +++ +A+ G C P
Sbjct: 882 LYIGGVAKEMYKSLPKLVHAKEGFQGCLASVDLNGRLPDLISDALFCNGQIERGCEGPST 941
Query: 263 -CITQPCGS-GSCVPLYDGYKCVCTQSCKESHLTEVMCAS--FDHGASFLHYLDPEIIHS 318
C C + G C+ +DG+ C C+ + L + F G + Y P
Sbjct: 942 TCQEDSCANQGVCLQQWDGFSCDCSMTSFSGPLCNDPGTTYIFSKGGGQITYTWPPNDRP 1001
Query: 319 SGLLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVM 378
S +L + F E + ++ SS+GL G D+L L IH G V
Sbjct: 1002 STRAD---RLAIGFSTVQKEAVL---VRVDSSTGL----G-----DYLELHIHQGKIGVK 1046
Query: 379 YXXXXXXXXXXXXQTKINNGVWH 401
+ IN+G +H
Sbjct: 1047 FNVGTDDIAIEEINAIINDGKYH 1069
Score = 137 (53.3 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 37/147 (25%), Positives = 68/147 (46%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCPL-GFTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQYL 105
C + C + G C+ C C + F+G LC + G ++
Sbjct: 943 CQEDSCANQGVCLQQWDGFSCDCSMTSFSGPLCNDPGTTYIFSKGGGQITYTWPPNDRPS 1002
Query: 106 SLLD-LTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSNP 164
+ D L I F ++ +L+ + G+GD++ L+++ + F++GT + N
Sbjct: 1003 TRADRLAIGFSTVQKEAVLV-RVDSSTGLGDYLELHIHQGKIGVKFNVGTDDIAIEEINA 1061
Query: 165 I-SLGEWHKLRLTRTGRHAYLQVDRFP 190
I + G++H +R TR+G +A LQVD +P
Sbjct: 1062 IINDGKYHVVRFTRSGGNATLQVDNWP 1088
Score = 134 (52.2 bits), Expect = 1.4e-11, Sum P(4) = 1.4e-11
Identities = 62/279 (22%), Positives = 117/279 (41%)
Query: 114 FKAIEPNGILLYN-G---HRADGVG------DFIALYLNDRYVDFTFDLGTGAATLRS-S 162
F+ EPNG++L++ G H+ D DF A+ + D ++ D+G+G +++
Sbjct: 364 FRTTEPNGLILFSHGKPRHQKDAKHPQMVKVDFFAIEMLDGHLYLLLDMGSGTIKIKALQ 423
Query: 163 NPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYN--IV 220
++ GEW+ + R GR + V+ + +PG GG+P+ +V
Sbjct: 424 KKVNDGEWYHVDFQRDGRSGTISVNTL-RTPYTAPGESEILDLDDDLYLGGLPENKAGLV 482
Query: 221 SPK----VKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNCAHPCITQPCGSGSCVPL 276
P + ++GCI+ + I+ +I Q + + A + C + P
Sbjct: 483 FPTEVWTALLNYGYVGCIRDLFIDGQSKDIR----QMAEIQSTAG--VKPSCSRETAKPC 536
Query: 277 YDGYKCVCTQSCKESHLTEVM-CASFDH-GASFLHYLDPEIIHSSGLLHYKFQLHVDFRI 334
C C++ V C+ + G S + I+ G + K QL V
Sbjct: 537 LSN-PCKNNGVCRDGWNRYVCDCSGTGYLGRSCER--EATILSYDGSMFMKIQLPVVMH- 592
Query: 335 TGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNG 373
T E ++ +R ++ + G+++ T S +S D L L + G
Sbjct: 593 TEAE-DVSLRFRSQRAYGILMATTSRESADTLRLELDAG 630
Score = 121 (47.7 bits), Expect = 3.3e-10, Sum P(4) = 3.3e-10
Identities = 46/180 (25%), Positives = 83/180 (46%)
Query: 86 VPQFNGSSYLRYQGLGEQYLSLLD-LTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDR 144
+ F GS Y Y S D +T+ FK ++ NG++L+ G AD ++ L L +
Sbjct: 132 IATFKGSEYFCYDLSQNPIQSSSDEITLSFKTLQRNGLMLHTGKSAD----YVNLALKNG 187
Query: 145 YVDFTFDLGTGA--ATLRSSN-PISLGEWHKLRLTRTGR-HA---YLQVDRFPSSQ---- 193
V +LG+GA A + N + WH +++TR R H+ + V++ S
Sbjct: 188 AVSLVINLGSGAFEALVEPVNGKFNDNAWHDVKVTRNLRQHSGIGHAMVNKLHCSVTISV 247
Query: 194 --ILSPGPFTQXXXXXXXXX-----GGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNI 246
IL+ +TQ GG P + P + ++F+GC+++V+ N+++ +
Sbjct: 248 DGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADL-PGSPVSNNFMGCLKEVVYKNNDVRL 306
Score = 116 (45.9 bits), Expect = 2.0e-09, Sum P(3) = 2.0e-09
Identities = 54/226 (23%), Positives = 92/226 (40%)
Query: 25 AWIQLNDGNKIKGRSKECLEDKCNKTPCEHGGKCITTPGSSYCLCP-LGFTGDLCQTRLD 83
A IQ G K S+E + C PC++ G C C C G+ G C+ +
Sbjct: 516 AEIQSTAGVK-PSCSRETAKP-CLSNPCKNNGVCRDGWNRYVCDCSGTGYLGRSCER--E 571
Query: 84 LQVPQFNGSSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLND 143
+ ++GS +++ Q + D+++ F++ GIL+ R D + L L+
Sbjct: 572 ATILSYDGSMFMKIQLPVVMHTEAEDVSLRFRSQRAYGILMATTSRESA--DTLRLELDA 629
Query: 144 RYVDFTFDL---------GTGAATLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQI 194
V T +L G TL + ++ EWH +R+ R G+ L VD +
Sbjct: 630 GRVKLTVNLDCIRINCNSSKGPETLFAGYNLNDNEWHTVRVVRRGKSLKLMVDDQQAMTG 689
Query: 195 LSPGPFTQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLIN 240
G T+ G + + +S + S+FIG +Q + N
Sbjct: 690 QMAGDHTRLEFHNIET-GIITERRYLS---SVPSNFIGHLQSLTFN 731
Score = 84 (34.6 bits), Expect = 1.4e-11, Sum P(4) = 1.4e-11
Identities = 18/66 (27%), Positives = 31/66 (46%)
Query: 344 RIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTK-INNGVWHR 402
+ KT+S GLIL+ S DF+ + + GY H ++ K +N+ WH
Sbjct: 788 QFKTTSLDGLILYN-SGDGNDFIVVELVKGYLHYVFDLGNGANLIKGSSNKPLNDNQWHN 846
Query: 403 LTVHRN 408
+ + R+
Sbjct: 847 VMISRD 852
Score = 72 (30.4 bits), Expect = 1.4e-11, Sum P(4) = 1.4e-11
Identities = 28/90 (31%), Positives = 43/90 (47%)
Query: 446 IRIDTDYSMQSISGGKFEQLNTDSGLYVGGVEDIEELTRS--KYHHSFKGWISNLILSND 503
++IDT + QS +G + L+ S LY+GGV +E+ +S K H+ +G+ + S D
Sbjct: 859 VKIDTKITTQSTAGAR--NLDLKSDLYIGGVA--KEMYKSLPKLVHAKEGF-QGCLASVD 913
Query: 504 YQVKLPLSRSQGSSCQLTCETLNTG-QVTC 532
+LP S C E G TC
Sbjct: 914 LNGRLPDLISDALFCNGQIERGCEGPSTTC 943
Score = 58 (25.5 bits), Expect = 1.2e-07, Sum P(4) = 1.2e-07
Identities = 10/45 (22%), Positives = 22/45 (48%)
Query: 364 DFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGVWHRLTVHRN 408
DF A+ + +G+ +++ Q K+N+G W+ + R+
Sbjct: 395 DFFAIEMLDGHLYLLLDMGSGTIKIKALQKKVNDGEWYHVDFQRD 439
Score = 44 (20.5 bits), Expect = 1.4e-11, Sum P(4) = 1.4e-11
Identities = 10/28 (35%), Positives = 12/28 (42%)
Query: 52 CEHGGKCITTPGSSYCLCP-LGFTGDLC 78
C +GG C + C C GF G C
Sbjct: 77 CLNGGVCSVLNDQAVCDCSQTGFRGKDC 104
Score = 42 (19.8 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 8/28 (28%), Positives = 16/28 (57%)
Query: 11 DDWNTVRVFRHRWDAWIQLNDGNKIKGR 38
++W+TVRV R + ++D + G+
Sbjct: 663 NEWHTVRVVRRGKSLKLMVDDQQAMTGQ 690
>UNIPROTKB|G3MXZ5 [details] [associations]
symbol:CELSR2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0004930 "G-protein
coupled receptor activity" evidence=IEA] [GO:0007218 "neuropeptide
signaling pathway" evidence=IEA] [GO:0005509 "calcium ion binding"
evidence=IEA] InterPro:IPR000203 InterPro:IPR000742
InterPro:IPR000832 InterPro:IPR001368 InterPro:IPR001879
InterPro:IPR001881 InterPro:IPR017981 Pfam:PF00002 Pfam:PF00008
Pfam:PF01825 PRINTS:PR00249 PROSITE:PS50026 PROSITE:PS50221
PROSITE:PS50227 PROSITE:PS50261 SMART:SM00008 SMART:SM00179
SMART:SM00181 SMART:SM00208 SMART:SM00303 InterPro:IPR000152
GO:GO:0016021 GO:GO:0005886 GO:GO:0004930 GO:GO:0007218
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 SMART:SM00180 SMART:SM00282
PROSITE:PS00010 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
InterPro:IPR022624 Pfam:PF12003 GeneTree:ENSGT00700000104170
Pfam:PF02210 EMBL:DAAA02007576 Ensembl:ENSBTAT00000063317
Uniprot:G3MXZ5
Length = 1482
Score = 204 (76.9 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 75/265 (28%), Positives = 113/265 (42%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQ-FNGSSYLRYQGLGEQYL 105
C+ C +GG C+ + C CPLGF G C ++ PQ F GSS L + GL
Sbjct: 443 CDSNSCHNGGTCVNQWDAFSCECPLGFGGKSCAQ--EMANPQRFLGSSLLAWHGLSLPIS 500
Query: 106 SLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTG--AATLR-SS 162
L+++F+ + +G+LL R I L L + V + + GTG A++L+
Sbjct: 501 QPWHLSLMFRTRQADGVLLQAVTRGRST---ITLQLREGRVVLSVE-GTGLQASSLQLEP 556
Query: 163 NPISLGEWH--KLRLTRTGR--HAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYN 218
+ G+WH +L L +G HA L D + GP GGVP
Sbjct: 557 GRANDGDWHHAQLALGASGGPGHAILSFDYGQQRAEGNLGPRLHGLHLSNVTVGGVP--- 613
Query: 219 IVSPKVKIKSSFIGCIQKVLINNHELNILG-EAIQG--VNVV-NCA--HPCITQPCGSGS 272
P + F GC+Q V ++ + + +G +NV C+ PC + PC + S
Sbjct: 614 --GPASGVARGFRGCLQGVRVSETPEGVSSLDPSRGESINVEPGCSLPDPCDSNPCPANS 671
Query: 273 -CVPLYDGYKCVCTQSCKESHLTEV 296
C +D Y C C + T V
Sbjct: 672 YCSDDWDSYSCSCDPGYYGDNCTNV 696
Score = 163 (62.4 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 43/134 (32%), Positives = 66/134 (49%)
Query: 46 KCNKTPCEHGGKCITT-PGSSYCLCPLG-FTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQ 103
+C C++GG C+ G C CP G F CQ + F S++ ++GL ++
Sbjct: 196 RCTPGVCKNGGTCVNLLVGGFKCNCPSGDFEKPFCQ----VTTRSFPARSFITFRGLRQR 251
Query: 104 YLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSN 163
+ L L+ K E +G+LLYNG R + DF+AL + V TF G T+
Sbjct: 252 FHFTLALSFATK--ERDGLLLYNG-RFNEKHDFVALEVIQEQVQLTFSAGESTTTVSPFV 308
Query: 164 P--ISLGEWHKLRL 175
P +S G+WH ++L
Sbjct: 309 PGGVSDGQWHTVQL 322
Score = 83 (34.3 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 20/77 (25%), Positives = 37/77 (48%)
Query: 212 GGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNCA---HPCITQPC 268
GGVPD P V+ + F+GCI+ + +++ +++ + C + C + C
Sbjct: 391 GGVPDLPESFP-VRTRQ-FVGCIRNLQVDSRHVDMADFIANNGTMPGCPAKKNVCDSNSC 448
Query: 269 -GSGSCVPLYDGYKCVC 284
G+CV +D + C C
Sbjct: 449 HNGGTCVNQWDAFSCEC 465
Score = 46 (21.3 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 13/34 (38%), Positives = 14/34 (41%)
Query: 258 NCAHPCITQPCGSGS-CV--PLYD-GYKCVCTQS 287
NC + C PC S C P GY C C S
Sbjct: 692 NCTNVCDLNPCEHQSMCTRKPSAPHGYTCECPPS 725
Score = 38 (18.4 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 5/14 (35%), Positives = 10/14 (71%)
Query: 47 CNKTPCEHGGKCIT 60
C + PCE+ +C++
Sbjct: 97 CLREPCENYMRCVS 110
>MGI|MGI:1858236 [details] [associations]
symbol:Celsr3 "cadherin, EGF LAG seven-pass G-type receptor
3 (flamingo homolog, Drosophila)" species:10090 "Mus musculus"
[GO:0001764 "neuron migration" evidence=IMP] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0004888 "transmembrane
signaling receptor activity" evidence=IEA] [GO:0004930 "G-protein
coupled receptor activity" evidence=IEA] [GO:0005509 "calcium ion
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0007156 "homophilic
cell adhesion" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0007166 "cell surface receptor signaling pathway"
evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0007218 "neuropeptide signaling pathway"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007413 "axonal fasciculation" evidence=IMP]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0032880 "regulation of protein
localization" evidence=IGI] [GO:0042384 "cilium assembly"
evidence=IGI] InterPro:IPR000203 InterPro:IPR000742
InterPro:IPR000832 InterPro:IPR001879 InterPro:IPR002126
InterPro:IPR015919 InterPro:IPR017981 InterPro:IPR017983
InterPro:IPR020894 Pfam:PF00002 Pfam:PF00008 Pfam:PF00028
Pfam:PF01825 Pfam:PF02793 PRINTS:PR00205 PRINTS:PR00249
PROSITE:PS00232 PROSITE:PS00649 PROSITE:PS00650 PROSITE:PS50026
PROSITE:PS50221 PROSITE:PS50227 PROSITE:PS50261 PROSITE:PS50268
SMART:SM00008 SMART:SM00112 SMART:SM00181 SMART:SM00303
MGI:MGI:1858236 GO:GO:0016021 GO:GO:0005886 GO:GO:0001764
GO:GO:0004930 GO:GO:0007218 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186 eggNOG:NOG12793
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 SMART:SM00180
SMART:SM00282 PROSITE:PS00010 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 GO:GO:0007413 GO:GO:0007156 SUPFAM:SSF49313
InterPro:IPR022624 Pfam:PF12003 Gene3D:2.60.40.60
GeneTree:ENSGT00700000104170 Pfam:PF02210 HOGENOM:HOG000231346
HOVERGEN:HBG050887 CTD:1951 KO:K04602 OMA:DGRRVDM OrthoDB:EOG4C87RG
EMBL:AF427498 EMBL:AC168054 EMBL:AF188752 IPI:IPI00284505
RefSeq:NP_536685.2 UniGene:Mm.39945 ProteinModelPortal:Q91ZI0
IntAct:Q91ZI0 STRING:Q91ZI0 PhosphoSite:Q91ZI0 PaxDb:Q91ZI0
PRIDE:Q91ZI0 Ensembl:ENSMUST00000024238 GeneID:107934
KEGG:mmu:107934 UCSC:uc009rrb.1 InParanoid:Q91ZI0 NextBio:359739
Bgee:Q91ZI0 Genevestigator:Q91ZI0 GermOnline:ENSMUSG00000023473
Uniprot:Q91ZI0
Length = 3301
Score = 170 (64.9 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 42/135 (31%), Positives = 68/135 (50%)
Query: 46 KCNKTPCEHGGKCITTPGSSY-CLCPLG--FTGDLCQTRLDLQVPQFNGSSYLRYQGLGE 102
+C C +GG C P + C CP G F G C+ + F SS++ ++GL +
Sbjct: 1467 RCVPGVCRNGGTCTNAPNGGFRCQCPAGGAFEGPRCE----VAARSFPPSSFVMFRGLRQ 1522
Query: 103 QYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSS 162
++ L L++ F ++P+G+L YNG R + DF+AL L V T+ G + +
Sbjct: 1523 RFH--LTLSLSFATVQPSGLLFYNG-RLNEKHDFLALELVAGQVRLTYSTGESNTVVSPT 1579
Query: 163 NP--ISLGEWHKLRL 175
P +S G+WH + L
Sbjct: 1580 VPGGLSDGQWHTVHL 1594
Score = 155 (59.6 bits), Expect = 5.7e-05, Sum P(3) = 5.7e-05
Identities = 67/257 (26%), Positives = 98/257 (38%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVP-QFNGSSYLRYQGLGEQYL 105
C PC++ G C G C CP+GF G C RL + P F G+ L + + +
Sbjct: 1715 CASGPCKNNGFCSERWGGFSCDCPVGFGGKDC--RLTMAHPYHFQGNGTLSWDFGNDMAV 1772
Query: 106 SL-LDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAAT--LRSS 162
S+ L + F+ GIL+ G + L+ + T + +G L
Sbjct: 1773 SVPWYLGLSFRTRATKGILM---QVQLGPHSVLLCKLDRGLLSVTLNRASGHTVHLLLDQ 1829
Query: 163 NPISLGEWHKLRLT-------RTGRHAYL-QVDRFPSSQILSPGPFTQXXXXXXXXXGGV 214
+S G WH LRL R G H ++ +D ++ G Q GG+
Sbjct: 1830 MTVSDGRWHDLRLELQEEPGGRRGHHIFMVSLDFTLFQDTMAMGGELQGLKVKQLHVGGL 1889
Query: 215 PDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNCAHPC-ITQPCGSGSC 273
P S K + +GCIQ V I + + VN C +T PC SG C
Sbjct: 1890 PP----SSKEEGHQGLVGCIQGVWIGFTPFGS-SALLPPSHRVNVEPGCTVTNPCASGPC 1944
Query: 274 VP------LYDGYKCVC 284
P L+ + C C
Sbjct: 1945 PPHADCKDLWQTFSCTC 1961
Score = 83 (34.3 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 22/77 (28%), Positives = 36/77 (46%)
Query: 212 GGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNC---AHPCITQPC 268
GGVP+ P V K FIGC++ + I+ +++ + C +H C + PC
Sbjct: 1663 GGVPNLPENFP-VSHKD-FIGCMRDLHIDGRRMDMAAFVANNGTMAGCQAKSHFCASGPC 1720
Query: 269 -GSGSCVPLYDGYKCVC 284
+G C + G+ C C
Sbjct: 1721 KNNGFCSERWGGFSCDC 1737
Score = 42 (19.8 bits), Expect = 5.7e-05, Sum P(3) = 5.7e-05
Identities = 6/17 (35%), Positives = 12/17 (70%)
Query: 44 EDKCNKTPCEHGGKCIT 60
++ C + PCE+ KC++
Sbjct: 1367 DNVCLREPCENYMKCVS 1383
Score = 40 (19.1 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 266 QPCGSGSCVPLYDGYKCVCT-QSCKESHLTEVMC 298
+P GS SC+P D Y T +SC H + C
Sbjct: 2056 RPRGSDSCLPC-DCYPVGSTSRSCAP-HSGQCPC 2087
>UNIPROTKB|G5EA25 [details] [associations]
symbol:FAT3 "Protocadherin Fat 3" species:9606 "Homo
sapiens" [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 EMBL:CH471065
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 Pfam:PF02210 EMBL:AP000722
EMBL:AP000805 EMBL:AP002514 EMBL:AP003171 EMBL:AP003718
HGNC:HGNC:23112 ChiTaRS:FAT3 ProteinModelPortal:G5EA25 SMR:G5EA25
Ensembl:ENST00000533797 ArrayExpress:G5EA25 Bgee:G5EA25
Uniprot:G5EA25
Length = 892
Score = 184 (69.8 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 74/262 (28%), Positives = 110/262 (41%)
Query: 45 DKCNKTPCEHGGKCITTPGSS---YCLCPLGFTGDLCQTRLDLQVPQFNGSSYLRYQGLG 101
D C + PC +C++ S C CP G G+ C L F G+SY++Y+ L
Sbjct: 132 DPCVEKPCPGDMQCVSYEASRRPFLCQCPPGKLGE-CSGHTSLS---FAGNSYIKYR-LS 186
Query: 102 EQYLSL-LDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLR 160
E L + + ++ NGI++Y RA+ I L + D + F D G+G L
Sbjct: 187 ENSKEEDFKLALRLRTLQSNGIIMYT--RANPC---IILKIVDGKLWFQLDCGSGPGILG 241
Query: 161 -SSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGG-VPDYN 218
S ++ G WH + L L +D + +P F G V N
Sbjct: 242 ISGRAVNDGSWHSVFLELNRNFTSLSLDDSYVERRRAPLYFQTLSTESSIYFGALVQADN 301
Query: 219 IVS---PKV-KIKSSFIGCIQKVLINNHELNILGEAIQGVNVVN-------CA-HP--CI 264
I S +V ++ S F GC+ V++NN+EL + + VV C +P C
Sbjct: 302 IRSLTDTRVTQVLSGFQGCLDSVILNNNELPLQNKRSSFAEVVGLTELKLGCVLYPDACK 361
Query: 265 TQPCG-SGSCVPLYDG-YKCVC 284
PC GSC L G Y+C C
Sbjct: 362 RSPCQHGGSCTGLPSGGYQCTC 383
Score = 55 (24.4 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 15/37 (40%), Positives = 18/37 (48%)
Query: 263 CITQPC-GSGSCVPLYDGYKCVCTQSCKESHLTEVMC 298
C PC GSC P+ G +C +CK LT V C
Sbjct: 399 CFPNPCRNGGSCDPI--GNTFIC--NCKAG-LTGVTC 430
>UNIPROTKB|F1NR89 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0001656
"metanephros development" evidence=IEA] [GO:0001657 "ureteric bud
development" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001933 "negative regulation of
protein phosphorylation" evidence=IEA] [GO:0002042 "cell migration
involved in sprouting angiogenesis" evidence=IEA] [GO:0005095
"GTPase inhibitor activity" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0008201 "heparin binding" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0010593
"negative regulation of lamellipodium assembly" evidence=IEA]
[GO:0010596 "negative regulation of endothelial cell migration"
evidence=IEA] [GO:0010629 "negative regulation of gene expression"
evidence=IEA] [GO:0016337 "cell-cell adhesion" evidence=IEA]
[GO:0021836 "chemorepulsion involved in postnatal olfactory bulb
interneuron migration" evidence=IEA] [GO:0021972 "corticospinal
neuron axon guidance through spinal cord" evidence=IEA] [GO:0030308
"negative regulation of cell growth" evidence=IEA] [GO:0030837
"negative regulation of actin filament polymerization"
evidence=IEA] [GO:0031290 "retinal ganglion cell axon guidance"
evidence=IEA] [GO:0032870 "cellular response to hormone stimulus"
evidence=IEA] [GO:0033563 "dorsal/ventral axon guidance"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043116 "negative regulation of vascular
permeability" evidence=IEA] [GO:0043237 "laminin-1 binding"
evidence=IEA] [GO:0043394 "proteoglycan binding" evidence=IEA]
[GO:0045499 "chemorepellent activity" evidence=IEA] [GO:0048495
"Roundabout binding" evidence=IEA] [GO:0048754 "branching
morphogenesis of an epithelial tube" evidence=IEA] [GO:0048846
"axon extension involved in axon guidance" evidence=IEA]
[GO:0050929 "induction of negative chemotaxis" evidence=IEA]
[GO:0051058 "negative regulation of small GTPase mediated signal
transduction" evidence=IEA] [GO:0051414 "response to cortisol
stimulus" evidence=IEA] [GO:0060763 "mammary duct terminal end bud
growth" evidence=IEA] [GO:0061364 "apoptotic process involved in
luteolysis" evidence=IEA] [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IEA] [GO:0071504
"cellular response to heparin" evidence=IEA] [GO:0071672 "negative
regulation of smooth muscle cell chemotaxis" evidence=IEA]
[GO:0071676 "negative regulation of mononuclear cell migration"
evidence=IEA] [GO:0090024 "negative regulation of neutrophil
chemotaxis" evidence=IEA] [GO:0090260 "negative regulation of
retinal ganglion cell axon guidance" evidence=IEA] [GO:0090288
"negative regulation of cellular response to growth factor
stimulus" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005737
GO:GO:0008285 GO:GO:0005615 GO:GO:0009986 GO:GO:0030308
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0008201 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0043065 GO:GO:0071504 GO:GO:0005095
GO:GO:0016337 PROSITE:PS01186 GO:GO:0032870 GO:GO:0030837
GO:GO:0010629 InterPro:IPR003645 InterPro:IPR001791 Pfam:PF00054
SMART:SM00274 SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025
GO:GO:0071672 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0010596 GO:GO:0001933 GO:GO:0071676 InterPro:IPR006207
PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041 GO:GO:0070100
GO:GO:0090288 GO:GO:0045499 Pfam:PF01463 GO:GO:0010593
GO:GO:0051414 GeneTree:ENSGT00700000104083 GO:GO:0050929
GO:GO:0090024 GO:GO:0051058 EMBL:AADN02015249 EMBL:AADN02015250
EMBL:AADN02015251 EMBL:AADN02015252 EMBL:AADN02015253
EMBL:AADN02015254 EMBL:AADN02015255 EMBL:AADN02015256
EMBL:AADN02015257 EMBL:AADN02015258 EMBL:AADN02015259
EMBL:AADN02015260 EMBL:AADN02015261 EMBL:AADN02015262
EMBL:AADN02015263 EMBL:AADN02015264 EMBL:AADN02015265
EMBL:AADN02015266 EMBL:AADN02015267 EMBL:AADN02015268
EMBL:AADN02015269 EMBL:AADN02015270 EMBL:AADN02015271
IPI:IPI00821752 Ensembl:ENSGALT00000037322 ArrayExpress:F1NR89
Uniprot:F1NR89
Length = 870
Score = 175 (66.7 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 61/245 (24%), Positives = 103/245 (42%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQYLS 106
C+ C++G +CI C C G+ G+ C+ + + N SYL+ + S
Sbjct: 466 CDNYECQNGAQCIVKESEPICQCLSGYQGEKCEKLISINF--VNKESYLQIPSA--KIHS 521
Query: 107 LLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGT-GAATLRSSNPI 165
++T+ E +GILLY G + D IA+ L V ++D G+ A+ + S I
Sbjct: 522 QTNITLQIATDEDSGILLYKGDK-----DHIAVELYRGRVRVSYDTGSYPASAIYSVETI 576
Query: 166 SLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIV----- 220
+ G +H + L + L +D I + + GG+P N +
Sbjct: 577 NDGNFHIVELLAMDQILSLSIDGGSPKIITNLSKQSTLNFDSPLYVGGMPVKNNIAALRQ 636
Query: 221 SPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNCAHPCITQPCGSGSC-VPLYDG 279
SP +SF GCI+ + IN+ + +Q V ++ PC + C G+C
Sbjct: 637 SPGQN-GTSFHGCIRNLYINSELQDFRNVPLQ-VGILPGCEPCHKKVCVHGTCHATSQSS 694
Query: 280 YKCVC 284
+ C C
Sbjct: 695 FTCEC 699
Score = 108 (43.1 bits), Expect = 7.2e-09, Sum P(4) = 7.2e-09
Identities = 21/65 (32%), Positives = 30/65 (46%)
Query: 26 WIQLNDGNKIKGRSKECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQ 85
W DG +G + E D C CE+ C+ + CLCP +TG+LC+ +LD
Sbjct: 324 WCTCADG--FEGENCEINVDDCEDNDCENNSTCVDGINNYTCLCPPEYTGELCEEKLDFC 381
Query: 86 VPQFN 90
N
Sbjct: 382 AQNLN 386
Score = 89 (36.4 bits), Expect = 7.6e-07, Sum P(4) = 7.6e-07
Identities = 17/41 (41%), Positives = 20/41 (48%)
Query: 45 DKC--NKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLD 83
D C N PC+H KCI TP C C G+ G+ C D
Sbjct: 379 DFCAQNLNPCQHDSKCILTPKGYKCDCTPGYVGEHCDIDFD 419
Score = 86 (35.3 bits), Expect = 1.6e-06, Sum P(4) = 1.6e-06
Identities = 17/51 (33%), Positives = 23/51 (45%)
Query: 36 KGRSKECLEDKCNKTPCEHGGKCITTPGSS---YCLCPLGFTGDLCQTRLD 83
KG+ + C PC HGG C G +C C GF G+ C+ +D
Sbjct: 291 KGQDCDIPIHACISNPCNHGGTCHLKEGEKDGFWCTCADGFEGENCEINVD 341
Score = 80 (33.2 bits), Expect = 9.8e-05, Sum P(3) = 9.8e-05
Identities = 12/44 (27%), Positives = 22/44 (50%)
Query: 45 DKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQ 88
D C C++G +C C+CP G++G C+ + +P+
Sbjct: 419 DDCQDNKCKNGAQCTDAVNGYTCICPEGYSGLFCEFSPPMVLPR 462
Score = 79 (32.9 bits), Expect = 3.5e-06, Sum P(4) = 3.5e-06
Identities = 16/37 (43%), Positives = 18/37 (48%)
Query: 46 KCN---KTPCEHGGKCITTPGSSY-CLCPLGFTGDLC 78
KCN PC++ G C P Y C CP GF G C
Sbjct: 259 KCNPCLSNPCKNDGTCNNDPVDFYRCTCPYGFKGQDC 295
Score = 77 (32.2 bits), Expect = 7.2e-09, Sum P(4) = 7.2e-09
Identities = 18/62 (29%), Positives = 29/62 (46%)
Query: 340 NIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGV 399
NI ++I T SG++L+ G KD +A+ ++ G V Y IN+G
Sbjct: 524 NITLQIATDEDSGILLYKGD---KDHIAVELYRGRVRVSYDTGSYPASAIYSVETINDGN 580
Query: 400 WH 401
+H
Sbjct: 581 FH 582
Score = 64 (27.6 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 22/68 (32%), Positives = 27/68 (39%)
Query: 262 PCITQPCGSGSCVPLYD-GYKCVCTQS-----CKESHLTEVMCASF--DHGASFLHYLD- 312
PC+ C G+C+P+ Y C C Q C E + C S HG L L
Sbjct: 715 PCLGNKCVHGTCLPINAFSYSCKCLQGHGGVLCDEEEMLFNPCQSIRCKHGKCRLSGLGK 774
Query: 313 PEIIHSSG 320
P SSG
Sbjct: 775 PYCECSSG 782
Score = 64 (27.6 bits), Expect = 7.2e-09, Sum P(4) = 7.2e-09
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 461 KFEQLNTDSGLYVGGV---EDIEELTRSKYHH--SFKGWISNLILSNDYQ 505
K LN DS LYVGG+ +I L +S + SF G I NL ++++ Q
Sbjct: 610 KQSTLNFDSPLYVGGMPVKNNIAALRQSPGQNGTSFHGCIRNLYINSELQ 659
Score = 55 (24.4 bits), Expect = 3.5e-06, Sum P(4) = 3.5e-06
Identities = 11/28 (39%), Positives = 13/28 (46%)
Query: 261 HPCITQPCGSGSCVPLY----DGYKCVC 284
H CI+ PC G L DG+ C C
Sbjct: 300 HACISNPCNHGGTCHLKEGEKDGFWCTC 327
Score = 51 (23.0 bits), Expect = 7.2e-09, Sum P(4) = 7.2e-09
Identities = 8/25 (32%), Positives = 13/25 (52%)
Query: 263 CITQPCGSGS-CVPLYDGYKCVCTQ 286
C C +G+ C +GY C+C +
Sbjct: 421 CQDNKCKNGAQCTDAVNGYTCICPE 445
Score = 50 (22.7 bits), Expect = 9.0e-09, Sum P(4) = 9.0e-09
Identities = 11/27 (40%), Positives = 12/27 (44%)
Query: 267 PCGSGS-CVPLYDGYKCVCTQSCKESH 292
PC S C+ GYKC CT H
Sbjct: 387 PCQHDSKCILTPKGYKCDCTPGYVGEH 413
Score = 43 (20.2 bits), Expect = 4.9e-05, Sum P(4) = 4.9e-05
Identities = 10/37 (27%), Positives = 15/37 (40%)
Query: 249 EAIQGVNVVNCAHPCITQPCGSGS-CVPLYDGYKCVC 284
+ +G N C C + S CV + Y C+C
Sbjct: 329 DGFEGENCEINVDDCEDNDCENNSTCVDGINNYTCLC 365
>UNIPROTKB|E1C8Q7 [details] [associations]
symbol:E1C8Q7 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004872 "receptor activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005246
"calcium channel regulator activity" evidence=IEA] [GO:0007269
"neurotransmitter secretion" evidence=IEA] [GO:0007416 "synapse
assembly" evidence=IEA] InterPro:IPR000742 InterPro:IPR027149
Pfam:PF00008 PROSITE:PS50026 SMART:SM00181 InterPro:IPR000152
GO:GO:0016021 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 GO:GO:0005246 Pfam:PF02210
InterPro:IPR003585 SMART:SM00294 GeneTree:ENSGT00560000076996
PANTHER:PTHR10127:SF405 EMBL:AADN02003517 EMBL:AADN02003518
EMBL:AADN02003519 EMBL:AADN02003520 EMBL:AADN02003521
EMBL:AADN02003522 EMBL:AADN02003523 EMBL:AADN02003524
EMBL:AADN02003525 EMBL:AADN02003526 EMBL:AADN02003527
EMBL:AADN02003528 EMBL:AADN02003529 EMBL:AADN02003530
EMBL:AADN02003531 EMBL:AADN02003532 EMBL:AADN02003533
EMBL:AADN02003534 EMBL:AADN02003535 EMBL:AADN02003536
EMBL:AADN02003537 EMBL:AADN02003538 EMBL:AADN02003539
IPI:IPI00971464 ProteinModelPortal:E1C8Q7
Ensembl:ENSGALT00000017127 OMA:CSRLSTK ArrayExpress:E1C8Q7
Uniprot:E1C8Q7
Length = 1540
Score = 205 (77.2 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 79/327 (24%), Positives = 138/327 (42%)
Query: 92 SSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFD 151
SSYL L + Y S+ L FK +G +L+N DG DFIA+ L Y+ + FD
Sbjct: 879 SSYLSLATL-QAYTSM-HLFFQFKTTSADGFILFNS--GDG-NDFIAVELVKGYIHYVFD 933
Query: 152 LGTGAATLR--SSNPISLGEWHKLRLTRTGRHAY-LQVDRFPSSQILSPGPFTQXXXXXX 208
LG G ++ S P++ +WH + +TR + + L+VD +Q+++
Sbjct: 934 LGNGPNVIKGNSDRPLNDNQWHNVVITRDNSNTHSLKVDTKMVTQVINGAKNLDLKGDLY 993
Query: 209 XXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVN--CAHP---C 263
Y+ + V + F GC+ V +N +++ +A+ + C P C
Sbjct: 994 IAGLAQGMYSNLPKLVASRDGFQGCLASVDLNGRLPDLINDALHRSGQIERGCEGPSTTC 1053
Query: 264 ITQPCGS-GSCVPLYDGYKCVCTQSCKESHLTEVMCASFDHGASFLHYLDPEIIHSSGLL 322
C + G C ++G+ C C+ + C D GA+++ S GL+
Sbjct: 1054 QEDSCANQGICNQQWEGFTCDCSMTSYSGS----QCN--DPGATYIFG------KSGGLI 1101
Query: 323 HYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSK-DFLALGIHNGYAHVMYXX 381
Y + + D T + + + T+ G+++ S+ DFL L I G V++
Sbjct: 1102 LYTWPAN-DRPSTRTD-RLAVGFSTTVKDGILVRIDSAPGLGDFLQLHIEQGKIGVVFNI 1159
Query: 382 XXXXXXXXXXQTKINNGVWHRLTVHRN 408
T +N+G +H + RN
Sbjct: 1160 GTVDISIKEESTPVNDGKYHVVRFTRN 1186
Score = 167 (63.8 bits), Expect = 5.5e-11, Sum P(2) = 5.5e-11
Identities = 79/315 (25%), Positives = 118/315 (37%)
Query: 109 DLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSNPISLG 168
+L+ FK G+LLY GV DF+ L L D + F + T+ + ++
Sbjct: 50 ELSFQFKTNVSAGLLLYFDD--GGVCDFLCLSLVDGRIQLQFSVDCAETTVITDKQVNDS 107
Query: 169 EWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDY----NIVSPKV 224
WH L ++R L +D + P GGVP Y + V
Sbjct: 108 NWHFLMVSRNHLRTVLVLDGEAKPGEVRPQR-QYMNIVSDLFVGGVPSYIRPAALTLDGV 166
Query: 225 KIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNCAHPCITQPCGSGSCVPLYDGY-KCV 283
+ F G I + N E +LG QGV + C PC +G L DG +C
Sbjct: 167 LSEPPFQGFILNLKYGNSEPQLLGS--QGVRL-EMEGLCTENPCENGGTCFLLDGEPRCD 223
Query: 284 CTQSCKESHLTEVMCASFDHGASFL----HYLDPEIIHSSGLLHYKFQLHVDFRITGYEF 339
C+ + L + SF G S L D + G + + L + I
Sbjct: 224 CSATGYTGKLCSEVSLSFK-GLSHLMMSEQARDENMATFRGSEYLCYDLSQN-PIQSSSD 281
Query: 340 NIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQT--KINN 397
I + KT +GLIL TG +S D++ L + +G ++ K N+
Sbjct: 282 EITLSFKTWQRNGLILHTG--KSADYVNLALKDGAVSLVINLGSGAFEAIVEPVNGKFND 339
Query: 398 GVWHRLTVHRNFMVV 412
WH + V RN V
Sbjct: 340 NAWHDVKVTRNLRQV 354
Score = 141 (54.7 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 44/162 (27%), Positives = 77/162 (47%)
Query: 36 KGRSKECLEDKC-NKTPCEHGGKCITTPGSSYCLCPL-GFTGDLCQTRLDLQVPQFNGSS 93
+G S C ED C N+ C + T C C + ++G C + +G
Sbjct: 1047 EGPSTTCQEDSCANQGICNQQWEGFT------CDCSMTSYSGSQCNDPGATYIFGKSGGL 1100
Query: 94 YLRYQGLGEQYLSLLD-LTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDL 152
L ++ + D L + F +GIL+ A G+GDF+ L++ + F++
Sbjct: 1101 ILYTWPANDRPSTRTDRLAVGFSTTVKDGILV-RIDSAPGLGDFLQLHIEQGKIGVVFNI 1159
Query: 153 GTGAATLRS-SNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQ 193
GT +++ S P++ G++H +R TR G +A LQVD +P ++
Sbjct: 1160 GTVDISIKEESTPVNDGKYHVVRFTRNGGNATLQVDSWPVNE 1201
Score = 133 (51.9 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 71/329 (21%), Positives = 131/329 (39%)
Query: 114 FKAIEPNGILLY-NG---HRADGVG------DFIALYLNDRYVDFTFDLGTGAATLRSSN 163
F+ EPNG++L+ +G R D DF A+ L D + D+G+G ++++
Sbjct: 475 FRTTEPNGLILFTHGKPQERKDARSQKNTKVDFFAVELLDGNLYLLLDMGSGTIKVKATQ 534
Query: 164 P-ISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYN--IV 220
+ GEW+ + + R GR + V+ + + G GG+P+ ++
Sbjct: 535 KKANDGEWYHVDIQRDGRSGTISVNS-RRTPFTASGESEILDLEGDMYLGGLPENRAGLI 593
Query: 221 SPK----VKIKSSFIGCIQKVLINNHELNI--LGEAIQGVNVVN-CAH----PCITQPCG 269
P + ++GCI+ + I+ NI L EA V + C+ C + PC
Sbjct: 594 LPTELWTAMLNYGYVGCIRDLFIDGRSKNIRQLAEAQNAAGVKSSCSRLSTKQCDSYPCK 653
Query: 270 SGS-CVPLYDGYKCVCTQSCKESHLTE--VMCASFDHGASFLHYLDPEIIHSSGLLHYKF 326
+ + C ++ + C CT + E S+D G+ ++ + P ++H+
Sbjct: 654 NNAVCKDGWNRFICDCTGTGYWGRTCEREASILSYD-GSMYMKIIMPMVMHTEA------ 706
Query: 327 QLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXX 386
E ++ R + + GL++ T S S D L L + G +M
Sbjct: 707 -----------E-DVSFRFMSQRAYGLLMATTSRDSADTLRLELDGGRVKLMVNLDCIRI 754
Query: 387 XXXXXQ--------TKINNGVWHRLTVHR 407
+ K+N+ WH + V R
Sbjct: 755 NCNASKGPETLYAGQKLNDNEWHTVRVVR 783
Score = 102 (41.0 bits), Expect = 0.00085, Sum P(3) = 0.00085
Identities = 52/227 (22%), Positives = 93/227 (40%)
Query: 43 LEDKCNKTPCEHGGKCITTPGSSYCLCPL-GFTGDLCQTRLDLQVPQFNGSSYL------ 95
+E C + PCE+GG C G C C G+TG LC + + L F G S+L
Sbjct: 198 MEGLCTENPCENGGTCFLLDGEPRCDCSATGYTGKLC-SEVSLS---FKGLSHLMMSEQA 253
Query: 96 RYQGL----GEQYLSLLDLTI-VFKAIEPNGILLYNGHRADGV-------GDFIALYLND 143
R + + G +YL DL+ ++ L + + +G+ D++ L L D
Sbjct: 254 RDENMATFRGSEYLCY-DLSQNPIQSSSDEITLSFKTWQRNGLILHTGKSADYVNLALKD 312
Query: 144 RYVDFTFDLGTGAATLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQX 203
V +LG+GA P++ G+++ L+ IL+ +TQ
Sbjct: 313 GAVSLVINLGSGAFEA-IVEPVN-GKFNDNAWHDVKVTRNLRQVTISVDGILTTTGYTQE 370
Query: 204 XXXXXXXXG----GVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNI 246
G P + ++F+GC+++V+ N+++ +
Sbjct: 371 DYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGCLKEVVYKNNDIRL 417
Score = 74 (31.1 bits), Expect = 5.5e-11, Sum P(2) = 5.5e-11
Identities = 19/77 (24%), Positives = 36/77 (46%)
Query: 436 RLHRTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVEDIEELTRSKYHHSFKGWI 495
++ R +Q I +D + + + L +D YVGG +L S ++F G +
Sbjct: 346 KVTRNLRQVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGCL 405
Query: 496 SNLILSNDYQVKLPLSR 512
++ N+ ++L LSR
Sbjct: 406 KEVVYKNN-DIRLELSR 421
Score = 64 (27.6 bits), Expect = 0.00085, Sum P(3) = 0.00085
Identities = 19/81 (23%), Positives = 36/81 (44%)
Query: 340 NIDMRIKTSSSSGLILWT-GSSQSK-----------DFLALGIHNGYAHVMYXXXXXXXX 387
+I +T+ +GLIL+T G Q + DF A+ + +G +++
Sbjct: 470 SISFDFRTTEPNGLILFTHGKPQERKDARSQKNTKVDFFAVELLDGNLYLLLDMGSGTIK 529
Query: 388 XXXXQTKINNGVWHRLTVHRN 408
Q K N+G W+ + + R+
Sbjct: 530 VKATQKKANDGEWYHVDIQRD 550
Score = 52 (23.4 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 21/101 (20%), Positives = 49/101 (48%)
Query: 437 LHRTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVEDIE-------ELTRSKYHH 489
+ R G+ I +++ + + SG + E L+ + +Y+GG+ + EL + ++
Sbjct: 547 IQRDGRSGTISVNSRRTPFTASG-ESEILDLEGDMYLGGLPENRAGLILPTELWTAMLNY 605
Query: 490 SFKGWISNLILSNDYQVKLPLSRSQGSS-CQLTCETLNTGQ 529
+ G I +L + + L+ +Q ++ + +C L+T Q
Sbjct: 606 GYVGCIRDLFIDGRSKNIRQLAEAQNAAGVKSSCSRLSTKQ 646
Score = 48 (22.0 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 16/59 (27%), Positives = 31/59 (52%)
Query: 446 IRIDTDYSMQSISGGKFEQLNTD---SGLYVGGVEDIEELTRSKYHHSFKGWISNLILS 501
+++DT Q I+G K L D +GL G ++ +L S+ F+G ++++ L+
Sbjct: 969 LKVDTKMVTQVINGAKNLDLKGDLYIAGLAQGMYSNLPKLVASR--DGFQGCLASVDLN 1025
Score = 38 (18.4 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 7/21 (33%), Positives = 13/21 (61%)
Query: 11 DDWNTVRVFRHRWDAWIQLND 31
++W+TVRV R + ++D
Sbjct: 774 NEWHTVRVVRRGKSLKLMVDD 794
>UNIPROTKB|F1N812 [details] [associations]
symbol:SLC26A6 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0007156 "homophilic cell adhesion" evidence=IEA] [GO:0007218
"neuropeptide signaling pathway" evidence=IEA] [GO:0008271
"secondary active sulfate transmembrane transporter activity"
evidence=IEA] [GO:0008272 "sulfate transport" evidence=IEA]
[GO:0004930 "G-protein coupled receptor activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0007413 "axonal fasciculation" evidence=IEA]
InterPro:IPR000203 InterPro:IPR000742 InterPro:IPR000832
InterPro:IPR001879 InterPro:IPR001881 InterPro:IPR001902
InterPro:IPR002126 InterPro:IPR011547 InterPro:IPR015919
InterPro:IPR017981 InterPro:IPR017983 InterPro:IPR020894
Pfam:PF00002 Pfam:PF00008 Pfam:PF00028 Pfam:PF00916 Pfam:PF01825
PRINTS:PR00205 PRINTS:PR00249 PROSITE:PS00232 PROSITE:PS00650
PROSITE:PS50026 PROSITE:PS50221 PROSITE:PS50227 PROSITE:PS50261
PROSITE:PS50268 SMART:SM00008 SMART:SM00112 SMART:SM00179
SMART:SM00181 SMART:SM00303 InterPro:IPR000152 GO:GO:0016021
GO:GO:0005886 GO:GO:0004930 GO:GO:0007218 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS00010 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 GO:GO:0008272 GO:GO:0007156
SUPFAM:SSF49313 InterPro:IPR022624 Pfam:PF12003 Gene3D:2.60.40.60
GeneTree:ENSGT00700000104170 Pfam:PF02210 OMA:DGRRVDM GO:GO:0008271
Gene3D:3.30.750.24 InterPro:IPR002645 SUPFAM:SSF52091
PROSITE:PS50801 Pfam:PF01740 TIGRFAMs:TIGR00815 EMBL:AADN02014037
EMBL:AADN02014038 EMBL:AADN02014039 EMBL:AADN02014040
IPI:IPI00594732 Ensembl:ENSGALT00000009205 ArrayExpress:F1N812
Uniprot:F1N812
Length = 3737
Score = 190 (71.9 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 69/275 (25%), Positives = 121/275 (44%)
Query: 25 AWIQLNDGNKIKGRSKECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDL 84
++I N+G +K C+ +PC++GG C + G+ CLCP+GF G C+ +
Sbjct: 1369 SYIANNNGTTAGCHAKHSF---CDSSPCKNGGTCSVSWGTYSCLCPVGFGGKDCRHAMH- 1424
Query: 85 QVPQFNGSSYLRYQGLGEQYLSL-LDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLND 143
F G+S L + + +S+ L + F+ + +G+LL H G + L+
Sbjct: 1425 HAHYFQGNSVLSWDFKADMKISVPWYLGLAFRTRQMDGVLL-QAHA--GQYTTLLCQLSG 1481
Query: 144 RYVDFTFDLGTGAATLRSSNPISL--GEWHKLRL----TRTGRHAYLQVDRFPSSQILSP 197
+ F G+G +T + + L G WH L+L R+GR + R+ + +L
Sbjct: 1482 GLLSFMVSRGSGRSTSLVLDQLQLNDGRWHDLQLELRDVRSGRDS-----RYVITIMLDF 1536
Query: 198 GPFTQXXXXXXXXXG-GVPDYNI--VSPKVKIKSSFIGCIQKVLINNHELN-ILGEAIQG 253
G + G V ++ V ++++ GCIQ V + + +L +
Sbjct: 1537 GLYQDTVVVGNELHGLKVKHLHVGGVLGSGEVQNGLRGCIQGVRLGDSVTGTVLPKPSHA 1596
Query: 254 VNV-VNCA--HPCITQPCGSGS-CVPLYDGYKCVC 284
+ V C+ PC + PC + S C + Y CVC
Sbjct: 1597 LRVEAGCSVPSPCDSNPCPANSICKDEWQSYSCVC 1631
Score = 163 (62.4 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 41/134 (30%), Positives = 65/134 (48%)
Query: 46 KCNKTPCEHGGKCIT-TPGSSYCLCPLG-FTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQ 103
+C C +GG C G C CP G F C+ L F S++ ++GL ++
Sbjct: 1140 RCQPGVCRNGGTCTNGADGGFRCQCPAGGFETPFCE----LSTRSFPPRSFVMFRGLRQR 1195
Query: 104 YLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSN 163
+ L L++ F +EP G+LLYNG R + DF+A+ + V + G + +
Sbjct: 1196 FH--LTLSLSFSTVEPGGLLLYNG-RLNERHDFLAVEIIQGQVQLKYSTGESSTVVSPYL 1252
Query: 164 P--ISLGEWHKLRL 175
P +S G+WH L+L
Sbjct: 1253 PGGVSDGQWHTLQL 1266
Score = 90 (36.7 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 43/198 (21%), Positives = 73/198 (36%)
Query: 212 GGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGE-AIQGVNVVNC--AHP-CITQP 267
GGVP+ P V + F+GC++ + I+N +++ A C H C + P
Sbjct: 1335 GGVPNLPENFP-VSHRD-FVGCMRDLYIDNKRIDLASYIANNNGTTAGCHAKHSFCDSSP 1392
Query: 268 C-GSGSCVPLYDGYKCVCTQSCKESHLTEVMCASFDHGASFLHYLDPEIIHSSGLLHYKF 326
C G+C + Y C+C M H A HY + +L + F
Sbjct: 1393 CKNGGTCSVSWGTYSCLCPVGFGGKDCRHAM-----HHA---HYFQ-----GNSVLSWDF 1439
Query: 327 QLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXX 386
+ + + Y + + +T G++L + Q L + G M
Sbjct: 1440 KADMKISVPWY---LGLAFRTRQMDGVLLQAHAGQYTTLLCQ-LSGGLLSFMVSRGSGRS 1495
Query: 387 XXXXX-QTKINNGVWHRL 403
Q ++N+G WH L
Sbjct: 1496 TSLVLDQLQLNDGRWHDL 1513
Score = 43 (20.2 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 213 GVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNIL 247
G PD+ +S K+ SF G I V++ N + +L
Sbjct: 2339 GNPDFCWISVHDKLVWSFAGPITVVIVMNGVMFLL 2373
>UNIPROTKB|F1NFR0 [details] [associations]
symbol:NRXN1 "Neurexin-1" species:9031 "Gallus gallus"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005246
"calcium channel regulator activity" evidence=IEA] [GO:0007269
"neurotransmitter secretion" evidence=IEA] [GO:0007612 "learning"
evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0030534
"adult behavior" evidence=IEA] [GO:0033130 "acetylcholine receptor
binding" evidence=IEA] [GO:0035176 "social behavior" evidence=IEA]
[GO:0042734 "presynaptic membrane" evidence=IEA] [GO:0050839 "cell
adhesion molecule binding" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0051965 "positive
regulation of synapse assembly" evidence=IEA] [GO:0051968 "positive
regulation of synaptic transmission, glutamatergic" evidence=IEA]
[GO:0060134 "prepulse inhibition" evidence=IEA] [GO:0071625
"vocalization behavior" evidence=IEA] [GO:0090129 "positive
regulation of synapse maturation" evidence=IEA] [GO:0097104
"postsynaptic membrane assembly" evidence=IEA] [GO:0097109
"neuroligin family protein binding" evidence=IEA] [GO:0097116
"gephyrin clustering" evidence=IEA] [GO:0097118 "neuroligin
clustering" evidence=IEA] [GO:0097119 "postsynaptic density protein
95 clustering" evidence=IEA] [GO:2000463 "positive regulation of
excitatory postsynaptic membrane potential" evidence=IEA]
[GO:2000821 "regulation of grooming behavior" evidence=IEA]
InterPro:IPR000742 InterPro:IPR027158 PROSITE:PS50026 SMART:SM00181
InterPro:IPR000152 GO:GO:0016021 GO:GO:0009986 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
InterPro:IPR001791 SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025
Pfam:PF02210 InterPro:IPR003585 SMART:SM00294
GeneTree:ENSGT00560000076996 PANTHER:PTHR10127:SF309
IPI:IPI00812400 OMA:GRSCERX EMBL:AADN02036293 EMBL:AADN02036298
EMBL:AADN02036299 EMBL:AADN02036300 EMBL:AADN02036301
EMBL:AADN02036302 EMBL:AADN02036303 EMBL:AC157664 EMBL:AC157952
Ensembl:ENSGALT00000014832 ArrayExpress:F1NFR0 Uniprot:F1NFR0
Length = 1357
Score = 191 (72.3 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 85/323 (26%), Positives = 135/323 (41%)
Query: 92 SSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFD 151
+SY+ L + Y S+ L FK +G++LYN DG DFI + L Y+ + FD
Sbjct: 763 ASYVALATL-QAYTSM-HLFFQFKTTSLDGLILYNS--GDG-NDFIVVELVKGYLHYVFD 817
Query: 152 LGTGAATLR-SSN-PISLGEWHKLRLTRTGRHAY-LQVDRFPSSQILSPGPFTQXXXXXX 208
LG GA ++ SSN P++ +WH + ++R + + +++D ++Q S
Sbjct: 818 LGNGANLIKGSSNKPLNDNQWHNVMISRDTNNLHTVKIDTKITTQ--STAGARNLDLKSD 875
Query: 209 XXXGGVPDYNIVS-PK-VKIKSSFIGCIQKVLINNHELNILGEAI--QGVNVVNCAHP-- 262
GGV S PK V K F GC+ V +N +++ +A+ G C P
Sbjct: 876 LYIGGVAKEMYKSLPKLVHAKEGFQGCLASVDLNGRLPDLISDALFCNGQIERGCEGPST 935
Query: 263 -CITQPCGS-GSCVPLYDGYKCVCTQSCKESHLTEVMCAS--FDHGASFLHYLDPEIIHS 318
C C + G C+ +DG+ C C+ + L + F G + Y P
Sbjct: 936 TCQEDSCANQGVCLQQWDGFSCDCSMTSFSGPLCNDPGTTYIFSKGGGQITYTWPPNDRP 995
Query: 319 SGLLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVM 378
S +L + F E + ++ SS+GL G D+L L IH G V
Sbjct: 996 STRAD---RLAIGFSTVQKEAVL---VRVDSSTGL----G-----DYLELHIHQGKIGVK 1040
Query: 379 YXXXXXXXXXXXXQTKINNGVWH 401
+ IN+G +H
Sbjct: 1041 FNVGTDDIAIEEINAIINDGKYH 1063
Score = 137 (53.3 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 37/147 (25%), Positives = 68/147 (46%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCPL-GFTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQYL 105
C + C + G C+ C C + F+G LC + G ++
Sbjct: 937 CQEDSCANQGVCLQQWDGFSCDCSMTSFSGPLCNDPGTTYIFSKGGGQITYTWPPNDRPS 996
Query: 106 SLLD-LTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSNP 164
+ D L I F ++ +L+ + G+GD++ L+++ + F++GT + N
Sbjct: 997 TRADRLAIGFSTVQKEAVLV-RVDSSTGLGDYLELHIHQGKIGVKFNVGTDDIAIEEINA 1055
Query: 165 I-SLGEWHKLRLTRTGRHAYLQVDRFP 190
I + G++H +R TR+G +A LQVD +P
Sbjct: 1056 IINDGKYHVVRFTRSGGNATLQVDNWP 1082
Score = 134 (52.2 bits), Expect = 2.4e-11, Sum P(3) = 2.4e-11
Identities = 62/279 (22%), Positives = 117/279 (41%)
Query: 114 FKAIEPNGILLYN-G---HRADGVG------DFIALYLNDRYVDFTFDLGTGAATLRS-S 162
F+ EPNG++L++ G H+ D DF A+ + D ++ D+G+G +++
Sbjct: 358 FRTTEPNGLILFSHGKPRHQKDAKHPQMVKVDFFAIEMLDGHLYLLLDMGSGTIKIKALQ 417
Query: 163 NPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYN--IV 220
++ GEW+ + R GR + V+ + +PG GG+P+ +V
Sbjct: 418 KKVNDGEWYHVDFQRDGRSGTISVNTL-RTPYTAPGESEILDLDDDLYLGGLPENKAGLV 476
Query: 221 SPK----VKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNCAHPCITQPCGSGSCVPL 276
P + ++GCI+ + I+ +I Q + + A + C + P
Sbjct: 477 FPTEVWTALLNYGYVGCIRDLFIDGQSKDIR----QMAEIQSTAG--VKPSCSRETAKPC 530
Query: 277 YDGYKCVCTQSCKESHLTEVM-CASFDH-GASFLHYLDPEIIHSSGLLHYKFQLHVDFRI 334
C C++ V C+ + G S + I+ G + K QL V
Sbjct: 531 LSN-PCKNNGVCRDGWNRYVCDCSGTGYLGRSCER--EATILSYDGSMFMKIQLPVVMH- 586
Query: 335 TGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNG 373
T E ++ +R ++ + G+++ T S +S D L L + G
Sbjct: 587 TEAE-DVSLRFRSQRAYGILMATTSRESADTLRLELDAG 624
Score = 132 (51.5 bits), Expect = 3.9e-11, Sum P(3) = 3.9e-11
Identities = 57/229 (24%), Positives = 98/229 (42%)
Query: 52 CEHGGKCITTPGSSYCLCP-LGFTGDLCQ--------------TRLDLQVPQFNGSSYLR 96
C +GG C + C C GF G C +R + + F GS Y
Sbjct: 77 CLNGGVCSVLNDQAVCDCSQTGFRGKDCSEGLAHLMMGDQGEASRKEEYIATFKGSEYFC 136
Query: 97 YQGLGEQYLSLLD-LTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTG 155
Y S D +T+ FK ++ NG++L+ G AD ++ L L + V +LG+G
Sbjct: 137 YDLSQNPIQSSSDEITLSFKTLQRNGLMLHTGKSAD----YVNLALKNGAVSLVINLGSG 192
Query: 156 A--ATLRSSN-PISLGEWHKLRLTRTGR-HA---YLQVDRFPSSQ------ILSPGPFTQ 202
A A + N + WH +++TR R H+ + V++ S IL+ +TQ
Sbjct: 193 AFEALVEPVNGKFNDNAWHDVKVTRNLRQHSGIGHAMVNKLHCSVTISVDGILTTTGYTQ 252
Query: 203 XXXXXXXXX-----GGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNI 246
GG P + P + ++F+GC+++V+ N+++ +
Sbjct: 253 EDYTMLGSDDFFYVGGSPSTADL-PGSPVSNNFMGCLKEVVYKNNDVRL 300
Score = 116 (45.9 bits), Expect = 2.0e-09, Sum P(3) = 2.0e-09
Identities = 54/226 (23%), Positives = 92/226 (40%)
Query: 25 AWIQLNDGNKIKGRSKECLEDKCNKTPCEHGGKCITTPGSSYCLCP-LGFTGDLCQTRLD 83
A IQ G K S+E + C PC++ G C C C G+ G C+ +
Sbjct: 510 AEIQSTAGVK-PSCSRETAKP-CLSNPCKNNGVCRDGWNRYVCDCSGTGYLGRSCER--E 565
Query: 84 LQVPQFNGSSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLND 143
+ ++GS +++ Q + D+++ F++ GIL+ R D + L L+
Sbjct: 566 ATILSYDGSMFMKIQLPVVMHTEAEDVSLRFRSQRAYGILMATTSRESA--DTLRLELDA 623
Query: 144 RYVDFTFDL---------GTGAATLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQI 194
V T +L G TL + ++ EWH +R+ R G+ L VD +
Sbjct: 624 GRVKLTVNLDCIRINCNSSKGPETLFAGYNLNDNEWHTVRVVRRGKSLKLMVDDQQAMTG 683
Query: 195 LSPGPFTQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLIN 240
G T+ G + + +S + S+FIG +Q + N
Sbjct: 684 QMAGDHTRLEFHNIET-GIITERRYLS---SVPSNFIGHLQSLTFN 725
Score = 84 (34.6 bits), Expect = 2.4e-11, Sum P(3) = 2.4e-11
Identities = 18/66 (27%), Positives = 31/66 (46%)
Query: 344 RIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTK-INNGVWHR 402
+ KT+S GLIL+ S DF+ + + GY H ++ K +N+ WH
Sbjct: 782 QFKTTSLDGLILYN-SGDGNDFIVVELVKGYLHYVFDLGNGANLIKGSSNKPLNDNQWHN 840
Query: 403 LTVHRN 408
+ + R+
Sbjct: 841 VMISRD 846
Score = 72 (30.4 bits), Expect = 2.4e-11, Sum P(3) = 2.4e-11
Identities = 28/90 (31%), Positives = 43/90 (47%)
Query: 446 IRIDTDYSMQSISGGKFEQLNTDSGLYVGGVEDIEELTRS--KYHHSFKGWISNLILSND 503
++IDT + QS +G + L+ S LY+GGV +E+ +S K H+ +G+ + S D
Sbjct: 853 VKIDTKITTQSTAGAR--NLDLKSDLYIGGVA--KEMYKSLPKLVHAKEGF-QGCLASVD 907
Query: 504 YQVKLPLSRSQGSSCQLTCETLNTG-QVTC 532
+LP S C E G TC
Sbjct: 908 LNGRLPDLISDALFCNGQIERGCEGPSTTC 937
Score = 58 (25.5 bits), Expect = 1.6e-08, Sum P(3) = 1.6e-08
Identities = 10/45 (22%), Positives = 22/45 (48%)
Query: 364 DFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGVWHRLTVHRN 408
DF A+ + +G+ +++ Q K+N+G W+ + R+
Sbjct: 389 DFFAIEMLDGHLYLLLDMGSGTIKIKALQKKVNDGEWYHVDFQRD 433
Score = 48 (22.0 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 15/51 (29%), Positives = 27/51 (52%)
Query: 428 EFKCLSIQRLHRTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVED 478
E+ + QR R+G + + T Y+ + G+ E L+ D LY+GG+ +
Sbjct: 424 EWYHVDFQRDGRSGTISVNTLRTPYT----APGESEILDLDDDLYLGGLPE 470
Score = 42 (19.8 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 8/28 (28%), Positives = 16/28 (57%)
Query: 11 DDWNTVRVFRHRWDAWIQLNDGNKIKGR 38
++W+TVRV R + ++D + G+
Sbjct: 657 NEWHTVRVVRRGKSLKLMVDDQQAMTGQ 684
>UNIPROTKB|F1PJ02 [details] [associations]
symbol:LAMA1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR008979 SUPFAM:SSF49785 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 GeneTree:ENSGT00700000104140
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 OMA:EPFYWRL GO:GO:0005606
EMBL:AAEX03005489 EMBL:AAEX03005490 EMBL:AAEX03005491
Ensembl:ENSCAFT00000029520 Uniprot:F1PJ02
Length = 3034
Score = 150 (57.9 bits), Expect = 1.2e-06, Sum P(3) = 1.2e-06
Identities = 46/178 (25%), Positives = 75/178 (42%)
Query: 108 LDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSNPISL 167
L + + + +G++ Y H+ + V D+ L L+ Y+ F FDLG G + PIS
Sbjct: 2696 LSVQLSIRTFASSGLIYYMAHQ-NQV-DYATLQLHGGYLHFMFDLGKGRTKVSHPAPISD 2753
Query: 168 GEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSPKVKIK 227
G+WH ++ R ++ VD S +++ G T GG+P I
Sbjct: 2754 GKWHTVKTEHFKRKGFMTVDGQESPTVITVGDGTMLDVEGKLYLGGLPSEYKARNIGNIT 2813
Query: 228 SSFIGCIQKVLINNHELNILGEAIQGVNVVNCAHPCITQPC----GSGSCVPLYDGYK 281
S CI +V +N +L+ + V C + Q GSG + +GYK
Sbjct: 2814 HSVPACIGEVTVNGKQLD-KDSPVSAFAVTRCY--AVAQEGTFFEGSGYAALVKEGYK 2868
Score = 142 (55.0 bits), Expect = 2.6e-11, Sum P(4) = 2.6e-11
Identities = 59/208 (28%), Positives = 94/208 (45%)
Query: 87 PQFNGSSYLRYQGLG----EQYL--SLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALY 140
PQ SS+ + G G E+ L ++ + ++F PNG+LLY ++G DF+++
Sbjct: 2255 PQNEDSSF-HFDGSGYSVVEKTLRVTVTQIIMLFSTFSPNGLLLYLA--SNGTKDFLSIE 2311
Query: 141 LNDRYVDFTFDLGTGAATLRSSNPISLGEWHKLRLTRTGRHAYLQV-DRFPSS-----QI 194
L V DLG+G L + + G W+K+ R + +L V D + +S Q
Sbjct: 2312 LVRGRVRVVVDLGSGPLALITDRRYNNGTWYKIAFQRNRKQGFLAVIDAYNTSYKETKQG 2371
Query: 195 LSPGPFTQXXXXXXX--XXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQ 252
+PG + GG+P IV V KS ++GCI+ + I+ ++L +
Sbjct: 2372 ETPGASSDLNRLDKDPIYVGGLPRSRIVRKGVTSKS-YVGCIKNLEISRSTFDLLRHSY- 2429
Query: 253 GVNVVNCAHPCITQPCGSGSCVPLYDGY 280
GV CI +P S S L GY
Sbjct: 2430 GVR-----KGCILEPIRSVSF--LKGGY 2450
Score = 128 (50.1 bits), Expect = 8.0e-10, Sum P(4) = 8.0e-10
Identities = 49/179 (27%), Positives = 73/179 (40%)
Query: 110 LTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSN-PISLG 168
LT+ K EP+ +L Y G DF+A+ + V F +D+G+G+ L + PI
Sbjct: 2096 LTLNVKTSEPDNLLFYLGSSTSA--DFMAVEMRRGKVAFLWDMGSGSTRLEFPDFPIDDN 2153
Query: 169 EWHKLRLTRTGRHAYLQV------DRFPSSQILSPGPFT--QXXXXXXXXXGGVPDYNIV 220
WH + +TR G L V ++ P SPG GG+
Sbjct: 2154 RWHSIYVTRFGNIGSLSVKEMSAIEKPPMKTSKSPGAANVLDINNSTLMFVGGLGGQIKK 2213
Query: 221 SPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNCAHPCITQPCGSGSCVPLYDG 279
SP VK+ + F GC+ + +N + L I+ C H C P S +DG
Sbjct: 2214 SPAVKV-THFKGCMGEAFLNGQSIG-LWNYIEREG--RC-HGCFGSPQNEDSSFH-FDG 2266
Score = 101 (40.6 bits), Expect = 5.4e-07, Sum P(4) = 5.4e-07
Identities = 36/131 (27%), Positives = 60/131 (45%)
Query: 136 FIALYLNDRYVDFTFDLGTGA----ATLRS-SNPISLGEWHKLRLTRTGRHAYLQVDRF- 189
F ++ L D +V+ + G G A LR+ S G+ H + L RT R +Q+D
Sbjct: 2501 FFSIMLIDGHVEVHVNSGDGTSLRRALLRAPKGTYSDGQEHSISLIRTRRVITVQMDETN 2560
Query: 190 PSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGE 249
P L P ++ GG+P+ S +K++ SF GCI+ ++ N L+
Sbjct: 2561 PVEMKLVPSAESRAINVSNLYVGGIPEGEGTSV-LKMRKSFHGCIKNLIFNMEHLDFTHV 2619
Query: 250 A-IQGVNVVNC 259
A + V++ C
Sbjct: 2620 ADYEQVDLDTC 2630
Score = 100 (40.3 bits), Expect = 2.6e-11, Sum P(4) = 2.6e-11
Identities = 31/108 (28%), Positives = 46/108 (42%)
Query: 313 PEII---HSSGLLHYK-FQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLAL 368
PE I H GL+ F L + ++ + I+T +SSGLI + D+ L
Sbjct: 2666 PEYIPNAHQFGLMQGSHFVLPFNQLAVRKRLSVQLSIRTFASSGLIYYMAHQNQVDYATL 2725
Query: 369 GIHNGYAHVMYXXXXXXXXXXXXQTKINNGVWHRL-TVH---RNFMVV 412
+H GY H M+ I++G WH + T H + FM V
Sbjct: 2726 QLHGGYLHFMFDLGKGRTKVSH-PAPISDGKWHTVKTEHFKRKGFMTV 2772
Score = 100 (40.3 bits), Expect = 1.0e-09, Sum P(3) = 1.0e-09
Identities = 52/205 (25%), Positives = 90/205 (43%)
Query: 341 IDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGVW 400
I M T S +GL+L+ S+ +KDFL++ + G V+ + + NNG W
Sbjct: 2283 IIMLFSTFSPNGLLLYLASNGTKDFLSIELVRGRVRVVVDLGSGPLALITDR-RYNNGTW 2341
Query: 401 HRLTVHRN----FMVVMHGSSHTRSNKSSKIEFKCLSIQRLHRTGKQCLIRIDTDYSMQS 456
+++ RN F+ V+ ++ S K +K + L+R K D Y +
Sbjct: 2342 YKIAFQRNRKQGFLAVI--DAYNTSYKETKQGETPGASSDLNRLDK------DPIY-VGG 2392
Query: 457 ISGGKFEQLNTDSGLYVGGVEDIEELTRSKY---HHSF---KGWISNLILSNDY----QV 506
+ + + S YVG ++++E ++RS + HS+ KG I I S + +
Sbjct: 2393 LPRSRIVRKGVTSKSYVGCIKNLE-ISRSTFDLLRHSYGVRKGCILEPIRSVSFLKGGYI 2451
Query: 507 KL-PLSRSQGSSCQLTCETLNTGQV 530
+L P S S S T T N+ +
Sbjct: 2452 ELSPKSLSPESELLATFATKNSSGI 2476
Score = 74 (31.1 bits), Expect = 1.4e-08, Sum P(3) = 1.4e-08
Identities = 21/70 (30%), Positives = 35/70 (50%)
Query: 437 LHRTGKQCLIRID--TDYSMQSISGGKFEQLNTDSGLYVGGVEDIEELTRSKYHHSFKGW 494
L RT + +++D M+ + + +N S LYVGG+ + E + K SF G
Sbjct: 2545 LIRTRRVITVQMDETNPVEMKLVPSAESRAINV-SNLYVGGIPEGEGTSVLKMRKSFHGC 2603
Query: 495 ISNLILSNDY 504
I NLI + ++
Sbjct: 2604 IKNLIFNMEH 2613
Score = 57 (25.1 bits), Expect = 2.6e-11, Sum P(4) = 2.6e-11
Identities = 12/49 (24%), Positives = 22/49 (44%)
Query: 34 KIKGRSKECLEDKCNKT-PCEHGGKCITTPGSSY-C-LCPLGFTGDLCQ 79
K+ G + +C C ++ P C+ + + C C LG+ G C+
Sbjct: 1394 KVTGSASDCSPCACPRSHPASFSPTCVLEGDADFRCDACVLGYEGQYCE 1442
Score = 56 (24.8 bits), Expect = 3.3e-11, Sum P(4) = 3.3e-11
Identities = 17/56 (30%), Positives = 19/56 (33%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQFNGSSYLRYQGLGE 102
C + C G P S CLC GD C DL P F +G E
Sbjct: 404 CIRCECSRAGSVNEDPCSEPCLCKENVEGDNC----DLCKPGFYNLKERNPEGCSE 455
Score = 50 (22.7 bits), Expect = 1.3e-10, Sum P(4) = 1.3e-10
Identities = 13/38 (34%), Positives = 17/38 (44%)
Query: 42 CLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQ 79
C C+ + HG C GS C+C G TG C+
Sbjct: 1459 CQRCDCSPSGSVHGD-C--DRGSGQCVCRPGATGLRCE 1493
Score = 46 (21.3 bits), Expect = 2.6e-11, Sum P(4) = 2.6e-11
Identities = 15/43 (34%), Positives = 22/43 (51%)
Query: 466 NTDSGLYVGGVE-DIEELTRSKYHHSFKGWISNLILSNDYQVK 507
+T +YVGG DI++ S SF+G + L L D V+
Sbjct: 2970 DTIDPIYVGGYPADIKQNCLSS-QTSFRGCLRKLTLIKDSHVQ 3011
Score = 46 (21.3 bits), Expect = 3.2e-10, Sum P(4) = 3.2e-10
Identities = 13/34 (38%), Positives = 16/34 (47%)
Query: 50 TPCEHGGKCITT-PGSSYCLCP---LGFTGDLCQ 79
TPC+ T P S C+CP G T D C+
Sbjct: 949 TPCDCAHTQHTCDPESGACICPPHTRGATCDQCE 982
Score = 45 (20.9 bits), Expect = 4.0e-10, Sum P(4) = 4.0e-10
Identities = 8/13 (61%), Positives = 8/13 (61%)
Query: 67 CLCPLGFTGDLCQ 79
CLCP G G CQ
Sbjct: 1315 CLCPPGTAGFSCQ 1327
Score = 45 (20.9 bits), Expect = 4.0e-10, Sum P(4) = 4.0e-10
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 66 YCLCPLGFTGDLCQTRL 82
+C CP G+ G C++ L
Sbjct: 661 HCECPQGYAGISCESCL 677
Score = 44 (20.5 bits), Expect = 5.0e-10, Sum P(4) = 5.0e-10
Identities = 13/40 (32%), Positives = 18/40 (45%)
Query: 39 SKECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLC 78
S C++D+ H GK PG C C G+ G+ C
Sbjct: 359 SSVCIKDELQSGL--HKGK---QPGQ--CPCKEGYAGEKC 391
Score = 42 (19.8 bits), Expect = 2.1e-05, Sum P(3) = 2.1e-05
Identities = 18/77 (23%), Positives = 35/77 (45%)
Query: 403 LTVHRNFMVVMH--GSSHTRSNKSSKI-EFKCLSIQRLHRTGKQCLIRIDTDYSMQSISG 459
L +H ++ M G T+ + + I + K +++ H K + +D S I+
Sbjct: 2725 LQLHGGYLHFMFDLGKGRTKVSHPAPISDGKWHTVKTEHFKRKG-FMTVDGQESPTVITV 2783
Query: 460 GKFEQLNTDSGLYVGGV 476
G L+ + LY+GG+
Sbjct: 2784 GDGTMLDVEGKLYLGGL 2800
>UNIPROTKB|F1MLJ7 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090288 "negative regulation of cellular response to
growth factor stimulus" evidence=IEA] [GO:0090260 "negative
regulation of retinal ganglion cell axon guidance" evidence=IEA]
[GO:0090024 "negative regulation of neutrophil chemotaxis"
evidence=IEA] [GO:0071676 "negative regulation of mononuclear cell
migration" evidence=IEA] [GO:0071672 "negative regulation of smooth
muscle cell chemotaxis" evidence=IEA] [GO:0071504 "cellular
response to heparin" evidence=IEA] [GO:0070100 "negative regulation
of chemokine-mediated signaling pathway" evidence=IEA] [GO:0061364
"apoptotic process involved in luteolysis" evidence=IEA]
[GO:0060763 "mammary duct terminal end bud growth" evidence=IEA]
[GO:0051414 "response to cortisol stimulus" evidence=IEA]
[GO:0051058 "negative regulation of small GTPase mediated signal
transduction" evidence=IEA] [GO:0050929 "induction of negative
chemotaxis" evidence=IEA] [GO:0048846 "axon extension involved in
axon guidance" evidence=IEA] [GO:0048754 "branching morphogenesis
of an epithelial tube" evidence=IEA] [GO:0048495 "Roundabout
binding" evidence=IEA] [GO:0045499 "chemorepellent activity"
evidence=IEA] [GO:0043394 "proteoglycan binding" evidence=IEA]
[GO:0043237 "laminin-1 binding" evidence=IEA] [GO:0043116 "negative
regulation of vascular permeability" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0033563 "dorsal/ventral axon guidance" evidence=IEA]
[GO:0032870 "cellular response to hormone stimulus" evidence=IEA]
[GO:0031290 "retinal ganglion cell axon guidance" evidence=IEA]
[GO:0030837 "negative regulation of actin filament polymerization"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0021972 "corticospinal neuron axon guidance
through spinal cord" evidence=IEA] [GO:0021836 "chemorepulsion
involved in postnatal olfactory bulb interneuron migration"
evidence=IEA] [GO:0016337 "cell-cell adhesion" evidence=IEA]
[GO:0010629 "negative regulation of gene expression" evidence=IEA]
[GO:0010596 "negative regulation of endothelial cell migration"
evidence=IEA] [GO:0010593 "negative regulation of lamellipodium
assembly" evidence=IEA] [GO:0009986 "cell surface" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0008201 "heparin binding" evidence=IEA]
[GO:0008045 "motor neuron axon guidance" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005615 "extracellular space"
evidence=IEA] [GO:0005095 "GTPase inhibitor activity" evidence=IEA]
[GO:0002042 "cell migration involved in sprouting angiogenesis"
evidence=IEA] [GO:0001933 "negative regulation of protein
phosphorylation" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001657 "ureteric bud development"
evidence=IEA] [GO:0001656 "metanephros development" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005737 GO:GO:0008285 GO:GO:0005615 GO:GO:0009986
GO:GO:0030308 GO:GO:0001701 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0008201 GO:GO:0005509
GO:GO:0043116 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0043065 GO:GO:0008045 GO:GO:0071504
GO:GO:0005095 GO:GO:0016337 PROSITE:PS01186 GO:GO:0032870
GO:GO:0030837 GO:GO:0010629 InterPro:IPR003645 InterPro:IPR001791
Pfam:PF00054 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 GO:GO:0071672 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0001656 GO:GO:0010596 GO:GO:0001657
GO:GO:0001933 GO:GO:0048754 GO:GO:0071676 GO:GO:0031290
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
GO:GO:0048846 GO:GO:0060763 GO:GO:0070100 GO:GO:0090288
GO:GO:0033563 GO:GO:0045499 GO:GO:0002042 Pfam:PF01463
GO:GO:0010593 GO:GO:0051414 GeneTree:ENSGT00700000104083
GO:GO:0090260 GO:GO:0021836 GO:GO:0061364 GO:GO:0021972
GO:GO:0050929 GO:GO:0090024 GO:GO:0051058 OMA:RHKMFKG
EMBL:DAAA02017049 IPI:IPI00692425 Ensembl:ENSBTAT00000061059
NextBio:20876291 Uniprot:F1MLJ7
Length = 1532
Score = 186 (70.5 bits), Expect = 2.7e-11, Sum P(2) = 2.7e-11
Identities = 64/247 (25%), Positives = 107/247 (43%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQYLS 106
C+ C++G +CI C C G+ G+ C+ +L + V N SYL+ +
Sbjct: 1127 CDNFDCQNGAQCIIRINEPICQCLPGYQGEKCE-KL-VSVNFVNKESYLQIPSA--KVRP 1182
Query: 107 LLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTG-AATLRSSNPI 165
++T+ E +GILLY G + D IA+ L V ++D G+ A+ + S I
Sbjct: 1183 QTNITLQIATDEDSGILLYKGDK-----DHIAVELYRGRVRASYDTGSHPASAIYSVETI 1237
Query: 166 SLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSPKVK 225
+ G +H + L + L VD I + + GG+P N V+ ++
Sbjct: 1238 NDGNFHIVELLALDQSLSLSVDGGSPKIITNLSKQSTLNFDSPLYVGGMPGKNNVAAALR 1297
Query: 226 IK-----SSFIGCIQKVLINNHELNILGEAIQGVNVVNCAHPCITQPCGSGSCVPLYD-G 279
+SF GCI+ + IN+ EL + ++ PC + C G+C P G
Sbjct: 1298 QAPGQNGTSFHGCIRNLYINS-ELQDFRKVPMQTGILPGCEPCHKKVCAHGTCQPSSQAG 1356
Query: 280 YKCVCTQ 286
+ C C +
Sbjct: 1357 FTCECEE 1363
Score = 106 (42.4 bits), Expect = 3.3e-05, Sum P(3) = 3.3e-05
Identities = 21/65 (32%), Positives = 30/65 (46%)
Query: 26 WIQLNDGNKIKGRSKECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQ 85
W DG +G + E D C CE+ C+ + CLCP +TG+LC+ +LD
Sbjct: 985 WCICADG--FEGENCEINVDDCEDNDCENNSTCVDGINNYTCLCPPEYTGELCEEKLDFC 1042
Query: 86 VPQFN 90
N
Sbjct: 1043 AQDLN 1047
Score = 77 (32.2 bits), Expect = 3.3e-05, Sum P(3) = 3.3e-05
Identities = 24/96 (25%), Positives = 42/96 (43%)
Query: 340 NIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGV 399
NI ++I T SG++L+ G KD +A+ ++ G Y IN+G
Sbjct: 1185 NITLQIATDEDSGILLYKGD---KDHIAVELYRGRVRASYDTGSHPASAIYSVETINDGN 1241
Query: 400 WH---RLTVHRNFMVVMHGSSH---TRSNKSSKIEF 429
+H L + ++ + + G S T +K S + F
Sbjct: 1242 FHIVELLALDQSLSLSVDGGSPKIITNLSKQSTLNF 1277
Score = 62 (26.9 bits), Expect = 0.00099, Sum P(3) = 0.00099
Identities = 30/105 (28%), Positives = 45/105 (42%)
Query: 445 LIRIDTDYSMQSISGG---------KFEQLNTDSGLYVGGV---EDIEELTRS---KYHH 489
L+ +D S+ S+ GG K LN DS LYVGG+ ++ R +
Sbjct: 1247 LLALDQSLSL-SVDGGSPKIITNLSKQSTLNFDSPLYVGGMPGKNNVAAALRQAPGQNGT 1305
Query: 490 SFKGWISNLILSNDYQV--KLPLSRSQGSSCQLTCETLNTGQVTC 532
SF G I NL ++++ Q K+P+ C+ C TC
Sbjct: 1306 SFHGCIRNLYINSELQDFRKVPMQTGILPGCE-PCHKKVCAHGTC 1349
Score = 57 (25.1 bits), Expect = 2.7e-11, Sum P(2) = 2.7e-11
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 262 PCITQPCGSGSCVPLYD-GYKCVCTQ 286
PC+ C G+C+P+ Y C C +
Sbjct: 1377 PCLGNKCVHGTCLPINAFSYSCKCLE 1402
Score = 49 (22.3 bits), Expect = 3.3e-05, Sum P(3) = 3.3e-05
Identities = 10/20 (50%), Positives = 11/20 (55%)
Query: 267 PCGSGS-CVPLYDGYKCVCT 285
PC S C+ GYKC CT
Sbjct: 1048 PCQHDSKCILTPKGYKCDCT 1067
Score = 48 (22.0 bits), Expect = 4.2e-05, Sum P(3) = 4.2e-05
Identities = 8/25 (32%), Positives = 12/25 (48%)
Query: 263 CITQPCGSGS-CVPLYDGYKCVCTQ 286
C C +G+ C +GY C C +
Sbjct: 1082 CQDNKCKNGAHCTDAVNGYTCTCPE 1106
>UNIPROTKB|J9NZ15 [details] [associations]
symbol:CELSR3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0004930 "G-protein
coupled receptor activity" evidence=IEA] [GO:0007218 "neuropeptide
signaling pathway" evidence=IEA] [GO:0007156 "homophilic cell
adhesion" evidence=IEA] [GO:0005509 "calcium ion binding"
evidence=IEA] InterPro:IPR000203 InterPro:IPR000742
InterPro:IPR000832 InterPro:IPR001879 InterPro:IPR002126
InterPro:IPR015919 InterPro:IPR017981 InterPro:IPR017983
InterPro:IPR020894 Pfam:PF00002 Pfam:PF00008 Pfam:PF00028
Pfam:PF01825 Pfam:PF02793 PRINTS:PR00205 PRINTS:PR00249
PROSITE:PS00232 PROSITE:PS00650 PROSITE:PS50026 PROSITE:PS50221
PROSITE:PS50227 PROSITE:PS50261 PROSITE:PS50268 SMART:SM00008
SMART:SM00112 SMART:SM00181 SMART:SM00303 GO:GO:0016021
GO:GO:0005886 GO:GO:0004930 GO:GO:0007218 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 GO:GO:0007156 SUPFAM:SSF49313 InterPro:IPR022624
Pfam:PF12003 Gene3D:2.60.40.60 GeneTree:ENSGT00700000104170
Pfam:PF02210 OMA:DGRRVDM EMBL:AAEX03012233
Ensembl:ENSCAFT00000042870 Uniprot:J9NZ15
Length = 3323
Score = 165 (63.1 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 42/135 (31%), Positives = 68/135 (50%)
Query: 46 KCNKTPCEHGGKCITTPGSSY-CLCPLG--FTGDLCQTRLDLQVPQFNGSSYLRYQGLGE 102
+C C +GG C P + C CP G F G C+ + F SS++ ++GL +
Sbjct: 1478 RCVPGICRNGGTCADGPDGGFRCQCPAGGAFEGPRCE----VAARSFPPSSFVMFRGLRQ 1533
Query: 103 QYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSS 162
++ L L++ F ++P+G+L YNG R + DF+AL L V T+ G + +
Sbjct: 1534 RFH--LTLSLSFATVQPSGLLFYNG-RLNEKHDFLALELVAGQVRLTYSTGESNTVVSPT 1590
Query: 163 NP--ISLGEWHKLRL 175
P +S G+WH + L
Sbjct: 1591 VPGGLSDGQWHTVHL 1605
Score = 152 (58.6 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 66/256 (25%), Positives = 100/256 (39%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQ-FNGSSYLRYQGLGEQYL 105
C+ PC++ G C G C CP+GF G C RL + P F G+ L + + +
Sbjct: 1726 CDSGPCKNSGFCSERWGGFSCDCPVGFGGKDC--RLTMAHPHHFRGNGTLTWDFGNDMAV 1783
Query: 106 SL-LDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAAT--LRSS 162
S+ L + F+ G+L+ +A G + L+ + G+G A L
Sbjct: 1784 SVPWYLGLAFRTRATQGVLMQV--QA-GPHSTLLCQLDRGLLSVMVTRGSGRAAHLLLDQ 1840
Query: 163 NPISLGEWHKLRLT-------RTGRHAYL-QVDRFPSSQILSPGPFTQXXXXXXXXXGGV 214
+S G WH LRL R G H + +D ++ G Q GG+
Sbjct: 1841 VTVSDGRWHDLRLELQEEPGGRRGHHVLMVSLDFSLFQDTMAVGSELQGLKVKRLHVGGL 1900
Query: 215 PDYNIVSPKVKIKSSFIGCIQKVLINNHELN--ILGEAIQGVNVV-NCAHP--CITQPCG 269
P S + ++ +GCIQ V + + L VNV C P C + PC
Sbjct: 1901 PP----SSEEEVPQGLVGCIQGVWLGSTPSGSPTLLPPSHRVNVEPGCVVPNACASGPCP 1956
Query: 270 S-GSCVPLYDGYKCVC 284
C L+ + C C
Sbjct: 1957 PHADCRDLWQTFSCTC 1972
Score = 86 (35.3 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 42/197 (21%), Positives = 72/197 (36%)
Query: 212 GGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNCA---HPCITQPC 268
GGVP+ P V K FIGC++ + I+ +++ + C H C + PC
Sbjct: 1674 GGVPNLPENFP-VSHKE-FIGCMRDLYIDGRRVDMAAFVANNGTMAGCQAKLHFCDSGPC 1731
Query: 269 -GSGSCVPLYDGYKCVCTQSCKESHLTEVMCASFDHGASFLHYLDPEIIHSSGLLHYKFQ 327
SG C + G+ C C V D + H P +G L + F
Sbjct: 1732 KNSGFCSERWGGFSCDCP----------VGFGGKDCRLTMAH---PHHFRGNGTLTWDFG 1778
Query: 328 LHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXX 387
+ + Y + + +T ++ G+++ + L + G VM
Sbjct: 1779 NDMAVSVPWY---LGLAFRTRATQGVLMQVQAGPHSTLLCQ-LDRGLLSVMVTRGSGRAA 1834
Query: 388 XXXX-QTKINNGVWHRL 403
Q +++G WH L
Sbjct: 1835 HLLLDQVTVSDGRWHDL 1851
Score = 42 (19.8 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 6/17 (35%), Positives = 12/17 (70%)
Query: 44 EDKCNKTPCEHGGKCIT 60
++ C + PCE+ KC++
Sbjct: 1376 DNVCLREPCENYMKCVS 1392
Score = 40 (19.1 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 266 QPCGSGSCVPLYDGYKCVCT-QSCKESHLTEVMC 298
+P GS SC+P D Y T +SC H + C
Sbjct: 2067 RPQGSDSCLPC-DCYPVGSTSRSCAP-HSGQCPC 2098
>RGD|69237 [details] [associations]
symbol:Celsr2 "cadherin, EGF LAG seven-pass G-type receptor 2"
species:10116 "Rattus norvegicus" [GO:0001764 "neuron migration"
evidence=ISO] [GO:0003341 "cilium movement" evidence=ISO]
[GO:0004930 "G-protein coupled receptor activity" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005886 "plasma membrane"
evidence=IEA;ISO] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0007156 "homophilic cell adhesion"
evidence=IEA;ISO] [GO:0007218 "neuropeptide signaling pathway"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEP]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016055 "Wnt
receptor signaling pathway" evidence=ISO] [GO:0021591 "ventricular
system development" evidence=ISO] [GO:0021999 "neural plate
anterior/posterior regionalization" evidence=ISO] [GO:0022407
"regulation of cell-cell adhesion" evidence=IMP] [GO:0032880
"regulation of protein localization" evidence=ISO] [GO:0033326
"cerebrospinal fluid secretion" evidence=ISO] [GO:0042384 "cilium
assembly" evidence=ISO] [GO:0048813 "dendrite morphogenesis"
evidence=IMP] InterPro:IPR000203 InterPro:IPR000742
InterPro:IPR000832 InterPro:IPR001368 InterPro:IPR001879
InterPro:IPR001881 InterPro:IPR002126 InterPro:IPR015919
InterPro:IPR017981 InterPro:IPR020894 Pfam:PF00002 Pfam:PF00008
Pfam:PF00028 Pfam:PF01825 PRINTS:PR00205 PRINTS:PR00249
PROSITE:PS00232 PROSITE:PS00649 PROSITE:PS00650 PROSITE:PS50026
PROSITE:PS50221 PROSITE:PS50227 PROSITE:PS50261 PROSITE:PS50268
SMART:SM00008 SMART:SM00112 SMART:SM00179 SMART:SM00181
SMART:SM00208 SMART:SM00303 InterPro:IPR000152 RGD:69237
GO:GO:0016021 GO:GO:0005886 GO:GO:0001764 GO:GO:0004930
GO:GO:0007218 GO:GO:0005509 GO:GO:0007283 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0048813 PROSITE:PS01186
GO:GO:0022407 eggNOG:NOG12793 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 SMART:SM00180 SMART:SM00282 PROSITE:PS00010
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 GO:GO:0007156
SUPFAM:SSF49313 InterPro:IPR022624 Pfam:PF12003 Gene3D:2.60.40.60
Pfam:PF02210 HOGENOM:HOG000231346 HOVERGEN:HBG050887 EMBL:AB011529
IPI:IPI00373409 UniGene:Rn.222746 ProteinModelPortal:Q9QYP2
STRING:Q9QYP2 PhosphoSite:Q9QYP2 PRIDE:Q9QYP2 UCSC:RGD:69237
InParanoid:Q9QYP2 ArrayExpress:Q9QYP2 Genevestigator:Q9QYP2
GermOnline:ENSRNOG00000020058 Uniprot:Q9QYP2
Length = 2144
Score = 207 (77.9 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 75/265 (28%), Positives = 113/265 (42%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQ-FNGSSYLRYQGLGEQYL 105
C+ C +GG C+ + C CPLGF G C ++ PQ F GSS + + GL
Sbjct: 803 CDSNTCHNGGTCVNQWDAFSCECPLGFGGKSCAQ--EMANPQRFLGSSLVAWHGLSLPIS 860
Query: 106 SLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTG--AATLR-SS 162
L+++F+ + +G+LL R I L L +V + + GTG A++LR
Sbjct: 861 QPWHLSLMFRTRQADGVLLQAVTRGRST---ITLQLRAGHVVLSVE-GTGLQASSLRLEP 916
Query: 163 NPISLGEWH--KLRLTRTGR--HAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYN 218
+ G+WH +L L +G HA L D + GP GGVP
Sbjct: 917 GRANDGDWHHAQLSLGASGGPGHAILSFDYGQQKAEGNLGPRLHGLHLSNMTVGGVP--- 973
Query: 219 IVSPKVKIKSSFIGCIQKVLINNHELNILG-EAIQG--VNVV-NCA--HPCITQPCGSGS 272
P + F GC+Q V ++ + + +G +NV C+ PC + PC + S
Sbjct: 974 --GPASSVARGFRGCLQGVRVSETPEGVSSLDPSRGESINVEPGCSWPDPCDSNPCPTNS 1031
Query: 273 -CVPLYDGYKCVCTQSCKESHLTEV 296
C +D Y C C + T V
Sbjct: 1032 YCSNDWDSYSCSCDPGYYGDNCTNV 1056
Score = 162 (62.1 bits), Expect = 3.7e-11, Sum P(2) = 3.7e-11
Identities = 43/134 (32%), Positives = 66/134 (49%)
Query: 46 KCNKTPCEHGGKCITT-PGSSYCLCPLG-FTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQ 103
+C C++GG C+ G C CP G F CQ + F S++ ++GL ++
Sbjct: 556 RCTPGVCKNGGTCVNLLVGGFKCDCPSGDFEKPFCQ----VTTRSFPARSFITFRGLRQR 611
Query: 104 YLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSN 163
+ L L+ K E +G+LLYNG R + DF+AL + V TF G T+
Sbjct: 612 FHFTLALSFATK--ERDGLLLYNG-RFNEKHDFVALEVIQEQVQLTFSAGESTTTVSPFV 668
Query: 164 P--ISLGEWHKLRL 175
P +S G+WH ++L
Sbjct: 669 PGGVSDGQWHTVQL 682
Score = 84 (34.6 bits), Expect = 3.7e-11, Sum P(2) = 3.7e-11
Identities = 20/77 (25%), Positives = 38/77 (49%)
Query: 212 GGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNCA---HPCITQPC 268
GGVPD P V+++ F+GC++ + +++ +++ V C + C + C
Sbjct: 751 GGVPDLPESFP-VRMRH-FVGCMKNLQVDSRHVDMADFIANNGTVPGCPTKKNVCDSNTC 808
Query: 269 -GSGSCVPLYDGYKCVC 284
G+CV +D + C C
Sbjct: 809 HNGGTCVNQWDAFSCEC 825
Score = 42 (19.8 bits), Expect = 7.8e-07, Sum P(2) = 7.8e-07
Identities = 12/31 (38%), Positives = 13/31 (41%)
Query: 258 NCAHPCITQPCGSGS-CV--PLYD-GYKCVC 284
NC + C PC S C P GY C C
Sbjct: 1052 NCTNVCDLNPCEHQSACTRKPSAPHGYICEC 1082
Score = 38 (18.4 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 5/14 (35%), Positives = 10/14 (71%)
Query: 47 CNKTPCEHGGKCIT 60
C + PCE+ +C++
Sbjct: 457 CLREPCENYMRCVS 470
>UNIPROTKB|F1MT47 [details] [associations]
symbol:NRXN1 "Neurexin-1-beta" species:9913 "Bos taurus"
[GO:0090129 "positive regulation of synapse maturation"
evidence=IEA] [GO:0051965 "positive regulation of synapse assembly"
evidence=IEA] [GO:0007416 "synapse assembly" evidence=IEA]
[GO:0007269 "neurotransmitter secretion" evidence=IEA]
InterPro:IPR000742 InterPro:IPR027158 PROSITE:PS50026 SMART:SM00181
InterPro:IPR000152 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 Pfam:PF02210
GeneTree:ENSGT00560000076996 PANTHER:PTHR10127:SF309
EMBL:DAAA02030804 EMBL:DAAA02030805 EMBL:DAAA02030806
EMBL:DAAA02030807 IPI:IPI00924356 Ensembl:ENSBTAT00000033082
OMA:GPLCNDR Uniprot:F1MT47
Length = 851
Score = 188 (71.2 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 61/207 (29%), Positives = 99/207 (47%)
Query: 92 SSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFD 151
SSY+ L + Y S+ L FK +G++LYN DG DFI + L Y+ + FD
Sbjct: 643 SSYVALATL-QAYTSM-HLFFQFKTTSLDGLILYNS--GDG-NDFIVVELVKGYLHYVFD 697
Query: 152 LGTGAATLR-SSN-PISLGEWHKLRLTRTGRHAY-LQVDRFPSSQILSPGPFTQXXXXXX 208
LG GA ++ SSN P++ +WH + ++R + + +++D ++QI +
Sbjct: 698 LGNGANLIKGSSNKPLNDNQWHNVMISRDTSNLHTVKIDTKITTQITAGA--RNLDLKSD 755
Query: 209 XXXGGVPDYNIVS-PK-VKIKSSFIGCIQKVLINNHELNILGEAI--QGVNVVNCAHP-- 262
GGV S PK V K F GC+ V +N +++ +A+ G C P
Sbjct: 756 LYIGGVAKETYKSLPKLVHAKEGFQGCLASVDLNGRLPDLISDALFCNGQIERGCEGPST 815
Query: 263 -CITQPCGS-GSCVPLYDGYKCVCTQS 287
C C + G C+ +DG+ C C+ +
Sbjct: 816 TCQEDSCSNQGVCLQQWDGFSCDCSMT 842
Score = 133 (51.9 bits), Expect = 3.1e-11, Sum P(3) = 3.1e-11
Identities = 62/279 (22%), Positives = 116/279 (41%)
Query: 114 FKAIEPNGILLYN-G---HRADGVG------DFIALYLNDRYVDFTFDLGTGAATLRS-S 162
F+ EPNG++L++ G H+ D DF A+ + D ++ D+G+G +++
Sbjct: 238 FRTTEPNGLILFSHGKPRHQKDAKHPQMIKVDFFAIEMLDGHLYLLLDMGSGTIKIKALQ 297
Query: 163 NPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYN--IV 220
++ GEW+ + R GR + V+ + +PG GG+P+ +V
Sbjct: 298 KKVNDGEWYHVDFQRDGRSGTISVNTL-RTPYTAPGESEILDLDDELYLGGLPENKAGLV 356
Query: 221 SPK----VKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNCAHPCITQPCGSGSCVPL 276
P + ++GCI+ + I+ +I Q V + A + C + P
Sbjct: 357 FPTEVWTALLNYGYVGCIRDLFIDGQSKDIR----QMAEVQSTAG--VKPSCSRETAKPC 410
Query: 277 YDGYKCVCTQSCKESHLTEVM-CASFDH-GASFLHYLDPEIIHSSGLLHYKFQLHVDFRI 334
C C++ V C+ + G S + ++ G + K QL V
Sbjct: 411 LSN-PCKNNGMCRDGWNRYVCDCSGTGYLGRSCER--EATVLSYDGSMFMKIQLPVVMH- 466
Query: 335 TGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNG 373
T E ++ +R ++ + G+++ T S S D L L + G
Sbjct: 467 TEAE-DVSLRFRSQRAYGILMATTSRDSADTLRLELDAG 504
Score = 121 (47.7 bits), Expect = 6.2e-10, Sum P(3) = 6.2e-10
Identities = 46/180 (25%), Positives = 83/180 (46%)
Query: 86 VPQFNGSSYLRYQGLGEQYLSLLD-LTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDR 144
+ F GS Y Y S D +T+ FK ++ NG++L+ G AD ++ L L +
Sbjct: 6 IATFKGSEYFCYDLSQNPIQSSSDEITLSFKTLQRNGLMLHTGKSAD----YVNLALKNG 61
Query: 145 YVDFTFDLGTGA--ATLRSSN-PISLGEWHKLRLTRTGR-HA---YLQVDRFPSSQ---- 193
V +LG+GA A + N + WH +++TR R H+ + V++ S
Sbjct: 62 AVSLVINLGSGAFEALVEPVNGKFNDNAWHDVKVTRNLRQHSGIGHAMVNKLHCSVTISV 121
Query: 194 --ILSPGPFTQXXXXXXXXX-----GGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNI 246
IL+ +TQ GG P + P + ++F+GC+++V+ N+++ +
Sbjct: 122 DGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADL-PGSPVSNNFMGCLKEVVYKNNDVRL 180
Score = 116 (45.9 bits), Expect = 2.1e-09, Sum P(3) = 2.1e-09
Identities = 49/204 (24%), Positives = 84/204 (41%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCP-LGFTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQYL 105
C PC++ G C C C G+ G C+ + V ++GS +++ Q +
Sbjct: 410 CLSNPCKNNGMCRDGWNRYVCDCSGTGYLGRSCER--EATVLSYDGSMFMKIQLPVVMHT 467
Query: 106 SLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDL---------GTGA 156
D+++ F++ GIL+ R D D + L L+ V T +L G
Sbjct: 468 EAEDVSLRFRSQRAYGILMATTSR-DSA-DTLRLELDAGRVKLTVNLDCIRINCNSSKGP 525
Query: 157 ATLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPD 216
TL + ++ EWH +R+ R G+ L VD + G T+ G + +
Sbjct: 526 ETLFAGYNLNDNEWHTVRVVRRGKSLKLTVDDQQAMTGQMAGDHTRLEFHNIET-GIITE 584
Query: 217 YNIVSPKVKIKSSFIGCIQKVLIN 240
+S + S+FIG +Q + N
Sbjct: 585 RRYLS---SVPSNFIGHLQSLTFN 605
Score = 84 (34.6 bits), Expect = 3.1e-11, Sum P(3) = 3.1e-11
Identities = 18/66 (27%), Positives = 31/66 (46%)
Query: 344 RIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTK-INNGVWHR 402
+ KT+S GLIL+ S DF+ + + GY H ++ K +N+ WH
Sbjct: 662 QFKTTSLDGLILYN-SGDGNDFIVVELVKGYLHYVFDLGNGANLIKGSSNKPLNDNQWHN 720
Query: 403 LTVHRN 408
+ + R+
Sbjct: 721 VMISRD 726
Score = 65 (27.9 bits), Expect = 3.1e-11, Sum P(3) = 3.1e-11
Identities = 25/88 (28%), Positives = 38/88 (43%)
Query: 446 IRIDTDYSMQSISGGKFEQLNTDSGLYVGGVEDIEELTRSKYHHSFKGWISNLILSNDYQ 505
++IDT + Q +G + L+ S LY+GGV + K H+ +G+ + S D
Sbjct: 733 VKIDTKITTQITAGAR--NLDLKSDLYIGGVAKETYKSLPKLVHAKEGF-QGCLASVDLN 789
Query: 506 VKLPLSRSQGSSCQLTCETLNTG-QVTC 532
+LP S C E G TC
Sbjct: 790 GRLPDLISDALFCNGQIERGCEGPSTTC 817
Score = 58 (25.5 bits), Expect = 2.5e-07, Sum P(3) = 2.5e-07
Identities = 10/45 (22%), Positives = 22/45 (48%)
Query: 364 DFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGVWHRLTVHRN 408
DF A+ + +G+ +++ Q K+N+G W+ + R+
Sbjct: 269 DFFAIEMLDGHLYLLLDMGSGTIKIKALQKKVNDGEWYHVDFQRD 313
Score = 47 (21.6 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 15/51 (29%), Positives = 27/51 (52%)
Query: 428 EFKCLSIQRLHRTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVED 478
E+ + QR R+G + + T Y+ + G+ E L+ D LY+GG+ +
Sbjct: 304 EWYHVDFQRDGRSGTISVNTLRTPYT----APGESEILDLDDELYLGGLPE 350
Score = 41 (19.5 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 8/28 (28%), Positives = 16/28 (57%)
Query: 11 DDWNTVRVFRHRWDAWIQLNDGNKIKGR 38
++W+TVRV R + ++D + G+
Sbjct: 537 NEWHTVRVVRRGKSLKLTVDDQQAMTGQ 564
>UNIPROTKB|Q9HCU4 [details] [associations]
symbol:CELSR2 "Cadherin EGF LAG seven-pass G-type receptor
2" species:9606 "Homo sapiens" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0007218 "neuropeptide signaling pathway"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0021591 "ventricular system development" evidence=IEA]
[GO:0004930 "G-protein coupled receptor activity" evidence=NAS]
[GO:0016021 "integral to membrane" evidence=NAS] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=NAS]
[GO:0021999 "neural plate anterior/posterior regionalization"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0022407 "regulation of cell-cell
adhesion" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=ISS] [GO:0007156 "homophilic
cell adhesion" evidence=ISS] [GO:0016055 "Wnt receptor signaling
pathway" evidence=ISS] [GO:0048813 "dendrite morphogenesis"
evidence=ISS] InterPro:IPR000203 InterPro:IPR000742
InterPro:IPR000832 InterPro:IPR001368 InterPro:IPR001879
InterPro:IPR001881 InterPro:IPR002126 InterPro:IPR015919
InterPro:IPR017981 InterPro:IPR020894 Pfam:PF00002 Pfam:PF00008
Pfam:PF00028 Pfam:PF01825 PRINTS:PR00205 PRINTS:PR00249
PROSITE:PS00232 PROSITE:PS00649 PROSITE:PS00650 PROSITE:PS50026
PROSITE:PS50221 PROSITE:PS50227 PROSITE:PS50261 PROSITE:PS50268
SMART:SM00008 SMART:SM00112 SMART:SM00179 SMART:SM00181
SMART:SM00208 SMART:SM00303 InterPro:IPR000152 GO:GO:0016021
GO:GO:0005886 GO:GO:0005737 GO:GO:0001764 GO:GO:0006355
GO:GO:0016055 GO:GO:0004930 GO:GO:0007218 GO:GO:0005509
GO:GO:0007283 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0048813 PROSITE:PS01186 GO:GO:0022407
eggNOG:NOG12793 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS00010 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 GO:GO:0007156 SUPFAM:SSF49313
InterPro:IPR022624 Pfam:PF12003 Gene3D:2.60.40.60 Pfam:PF02210
HOGENOM:HOG000231346 HOVERGEN:HBG050887 OrthoDB:EOG4KKZ23
EMBL:AF234887 EMBL:AB065955 EMBL:AL390252 EMBL:D87469
IPI:IPI00015346 RefSeq:NP_001399.1 UniGene:Hs.57652
ProteinModelPortal:Q9HCU4 SMR:Q9HCU4 IntAct:Q9HCU4
MINT:MINT-1395407 STRING:Q9HCU4 MEROPS:I63.002 PhosphoSite:Q9HCU4
DMDM:22095550 PaxDb:Q9HCU4 PRIDE:Q9HCU4 Ensembl:ENST00000271332
GeneID:1952 KEGG:hsa:1952 UCSC:uc001dxa.4 CTD:1952
GeneCards:GC01P109792 HGNC:HGNC:3231 HPA:HPA013952 MIM:604265
neXtProt:NX_Q9HCU4 PharmGKB:PA26394 InParanoid:Q9HCU4 KO:K04601
OMA:YILRAYA ChiTaRS:CELSR2 GenomeRNAi:1952 NextBio:7911 Bgee:Q9HCU4
CleanEx:HS_CELSR2 Genevestigator:Q9HCU4 GermOnline:ENSG00000143126
GO:GO:0021999 Uniprot:Q9HCU4
Length = 2923
Score = 209 (78.6 bits), Expect = 3.3e-11, Sum P(2) = 3.3e-11
Identities = 75/265 (28%), Positives = 114/265 (43%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQ-FNGSSYLRYQGLGEQYL 105
C+ C +GG C+ + C CPLGF G C ++ PQ F GSS + + GL
Sbjct: 1578 CDSNTCHNGGTCVNQWDAFSCECPLGFGGKSCAQ--EMANPQHFLGSSLVAWHGLSLPIS 1635
Query: 106 SLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTG--AATLR-SS 162
L+++F+ + +G+LL R I L L + +V + + GTG A++LR
Sbjct: 1636 QPWYLSLMFRTRQADGVLLQAITRGRST---ITLQLREGHVMLSVE-GTGLQASSLRLEP 1691
Query: 163 NPISLGEWH--KLRLTRTGR--HAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYN 218
+ G+WH +L L +G HA L D + GP GG+P
Sbjct: 1692 GRANDGDWHHAQLALGASGGPGHAILSFDYGQQRAEGNLGPRLHGLHLSNITVGGIP--- 1748
Query: 219 IVSPKVKIKSSFIGCIQKVLINN--HELNIL----GEAIQGVNVVNCAHPCITQPCGSGS 272
P + F GC+Q V +++ +N L GE+I + PC + PC + S
Sbjct: 1749 --GPAGGVARGFRGCLQGVRVSDTPEGVNSLDPSHGESINVEQGCSLPDPCDSNPCPANS 1806
Query: 273 -CVPLYDGYKCVCTQSCKESHLTEV 296
C +D Y C C + T V
Sbjct: 1807 YCSNDWDSYSCSCDPGYYGDNCTNV 1831
Score = 161 (61.7 bits), Expect = 3.5e-11, Sum P(2) = 3.5e-11
Identities = 43/134 (32%), Positives = 66/134 (49%)
Query: 46 KCNKTPCEHGGKCITT-PGSSYCLCPLG-FTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQ 103
+C C++GG C+ G C CP G F CQ + F S++ ++GL ++
Sbjct: 1331 RCTPGVCKNGGTCVNLLVGGFKCDCPSGDFEKPYCQ----VTTRSFPAHSFITFRGLRQR 1386
Query: 104 YLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSN 163
+ L L+ K E +G+LLYNG R + DF+AL + V TF G T+
Sbjct: 1387 FHFTLALSFATK--ERDGLLLYNG-RFNEKHDFVALEVIQEQVQLTFSAGESTTTVSPFV 1443
Query: 164 P--ISLGEWHKLRL 175
P +S G+WH ++L
Sbjct: 1444 PGGVSDGQWHTVQL 1457
Score = 88 (36.0 bits), Expect = 3.5e-11, Sum P(2) = 3.5e-11
Identities = 39/197 (19%), Positives = 78/197 (39%)
Query: 212 GGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNCA---HPCITQPC 268
GGVPD P V+++ F+GC++ + +++ +++ V C + C + C
Sbjct: 1526 GGVPDLPESFP-VRMRQ-FVGCMRNLQVDSRHIDMADFIANNGTVPGCPAKKNVCDSNTC 1583
Query: 269 -GSGSCVPLYDGYKCVCTQSCKESHLTEVMCASFDHGASFLHYLDPEIIHSSGLLHYKFQ 327
G+CV +D + C C + M A+ H+L ++ GL
Sbjct: 1584 HNGGTCVNQWDAFSCECPLGFGGKSCAQEM-------ANPQHFLGSSLVAWHGL-----S 1631
Query: 328 LHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXX 387
L + + + + +T + G++L ++ + + L + G HVM
Sbjct: 1632 LPIS-----QPWYLSLMFRTRQADGVLL-QAITRGRSTITLQLREG--HVMLSVEGTGLQ 1683
Query: 388 XXXXQT---KINNGVWH 401
+ + N+G WH
Sbjct: 1684 ASSLRLEPGRANDGDWH 1700
Score = 44 (20.5 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 12/31 (38%), Positives = 13/31 (41%)
Query: 258 NCAHPCITQPCGSGS-CV--PLYD-GYKCVC 284
NC + C PC S C P GY C C
Sbjct: 1827 NCTNVCDLNPCEHQSVCTRKPSAPHGYTCEC 1857
Score = 38 (18.4 bits), Expect = 3.3e-11, Sum P(2) = 3.3e-11
Identities = 5/14 (35%), Positives = 10/14 (71%)
Query: 47 CNKTPCEHGGKCIT 60
C + PCE+ +C++
Sbjct: 1232 CLREPCENYMRCVS 1245
>UNIPROTKB|F1PJQ3 [details] [associations]
symbol:NRXN1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0090129 "positive regulation of synapse
maturation" evidence=IEA] [GO:0051965 "positive regulation of
synapse assembly" evidence=IEA] [GO:0007416 "synapse assembly"
evidence=IEA] [GO:0007269 "neurotransmitter secretion"
evidence=IEA] InterPro:IPR000742 InterPro:IPR027158 PROSITE:PS50026
SMART:SM00181 InterPro:IPR000152 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
InterPro:IPR001791 SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025
Pfam:PF02210 GeneTree:ENSGT00560000076996 PANTHER:PTHR10127:SF309
OMA:GPLCNDR EMBL:AAEX03007511 Ensembl:ENSCAFT00000004299
Uniprot:F1PJQ3
Length = 811
Score = 188 (71.2 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 61/207 (29%), Positives = 99/207 (47%)
Query: 92 SSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFD 151
SSY+ L + Y S+ L FK +G++LYN DG DFI + L Y+ + FD
Sbjct: 593 SSYVALATL-QAYTSM-HLFFQFKTTSLDGLILYNS--GDG-NDFIVVELVKGYLHYVFD 647
Query: 152 LGTGAATLR-SSN-PISLGEWHKLRLTRTGRHAY-LQVDRFPSSQILSPGPFTQXXXXXX 208
LG GA ++ SSN P++ +WH + ++R + + +++D ++QI +
Sbjct: 648 LGNGANLIKGSSNKPLNDNQWHNVMISRDTSNLHTVKIDTKITTQITAGA--RNLDLKSD 705
Query: 209 XXXGGVPDYNIVS-PK-VKIKSSFIGCIQKVLINNHELNILGEAI--QGVNVVNCAHP-- 262
GGV S PK V K F GC+ V +N +++ +A+ G C P
Sbjct: 706 LYIGGVAKETYKSLPKLVHAKEGFQGCLASVDLNGRLPDLISDALFCNGQIERGCEGPST 765
Query: 263 -CITQPCGS-GSCVPLYDGYKCVCTQS 287
C C + G C+ +DG+ C C+ +
Sbjct: 766 TCQEDSCSNQGVCLQQWDGFSCDCSMT 792
Score = 132 (51.5 bits), Expect = 3.4e-11, Sum P(3) = 3.4e-11
Identities = 61/279 (21%), Positives = 116/279 (41%)
Query: 114 FKAIEPNGILLYN-G---HRADGVG------DFIALYLNDRYVDFTFDLGTGAATLRS-S 162
F+ EPNG++L++ G H+ D DF A+ + D ++ D+G+G +++
Sbjct: 188 FRTTEPNGLILFSHGKPRHQKDAKHPQMIKVDFFAIEMLDGHLYLLLDMGSGTIKIKALQ 247
Query: 163 NPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYN--IV 220
++ GEW+ + R GR + V+ + +PG GG+P+ +V
Sbjct: 248 KKVNDGEWYHVDFQRDGRSGTISVNTL-RTPYTAPGESEILDLDDELYLGGLPENKAGLV 306
Query: 221 SPK----VKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNCAHPCITQPCGSGSCVPL 276
P + ++GCI+ + I+ +I Q + + A + C + P
Sbjct: 307 FPTEVWTALLNYGYVGCIRDLFIDGQSKDIR----QMAEIQSTAG--VKPSCSRETAKPC 360
Query: 277 YDGYKCVCTQSCKESHLTEVM-CASFDH-GASFLHYLDPEIIHSSGLLHYKFQLHVDFRI 334
C C++ V C+ + G S + ++ G + K QL V
Sbjct: 361 LSN-PCKNNGMCRDGWNRYVCDCSGTGYLGRSCER--EATVLSYDGSMFMKIQLPVVMH- 416
Query: 335 TGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNG 373
T E ++ +R ++ + G+++ T S S D L L + G
Sbjct: 417 TEAE-DVSLRFRSQRAYGILMATTSRDSADTLRLELDAG 454
Score = 117 (46.2 bits), Expect = 1.4e-09, Sum P(3) = 1.4e-09
Identities = 56/226 (24%), Positives = 93/226 (41%)
Query: 25 AWIQLNDGNKIKGRSKECLEDKCNKTPCEHGGKCITTPGSSYCLCP-LGFTGDLCQTRLD 83
A IQ G K S+E + C PC++ G C C C G+ G C+ +
Sbjct: 340 AEIQSTAGVK-PSCSRETAKP-CLSNPCKNNGMCRDGWNRYVCDCSGTGYLGRSCER--E 395
Query: 84 LQVPQFNGSSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLND 143
V ++GS +++ Q + D+++ F++ GIL+ R D D + L L+
Sbjct: 396 ATVLSYDGSMFMKIQLPVVMHTEAEDVSLRFRSQRAYGILMATTSR-DSA-DTLRLELDA 453
Query: 144 RYVDFTFDL---------GTGAATLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQI 194
V T +L G TL + ++ EWH +R+ R G+ L VD +
Sbjct: 454 GRVKLTVNLDCIRINCNSSKGPETLFAGYNLNDNEWHTVRVVRRGKSLKLTVDDQQAMTG 513
Query: 195 LSPGPFTQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLIN 240
G T+ G + + +S + S+FIG +Q + N
Sbjct: 514 QMAGDHTRLEFHNIET-GIITERRYLS---SVPSNFIGHLQSLTFN 555
Score = 87 (35.7 bits), Expect = 2.3e-06, Sum P(3) = 2.3e-06
Identities = 32/135 (23%), Positives = 62/135 (45%)
Query: 123 LLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGA--ATLRSSN-PISLGEWHKLRLTRTG 179
+L+ G AD ++ L L + V +LG+GA A + N + WH +++TR
Sbjct: 1 MLHTGKSAD----YVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNAWHDVKVTRNL 56
Query: 180 R------HAY--LQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSPKVKIKSSFI 231
R HA + VD ++ + +T GG P + P + ++F+
Sbjct: 57 RQHSGIGHAMVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADL-PGSPVSNNFM 115
Query: 232 GCIQKVLINNHELNI 246
GC+++V+ N+++ +
Sbjct: 116 GCLKEVVYKNNDVRL 130
Score = 84 (34.6 bits), Expect = 3.4e-11, Sum P(3) = 3.4e-11
Identities = 18/66 (27%), Positives = 31/66 (46%)
Query: 344 RIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTK-INNGVWHR 402
+ KT+S GLIL+ S DF+ + + GY H ++ K +N+ WH
Sbjct: 612 QFKTTSLDGLILYN-SGDGNDFIVVELVKGYLHYVFDLGNGANLIKGSSNKPLNDNQWHN 670
Query: 403 LTVHRN 408
+ + R+
Sbjct: 671 VMISRD 676
Score = 65 (27.9 bits), Expect = 3.4e-11, Sum P(3) = 3.4e-11
Identities = 25/88 (28%), Positives = 38/88 (43%)
Query: 446 IRIDTDYSMQSISGGKFEQLNTDSGLYVGGVEDIEELTRSKYHHSFKGWISNLILSNDYQ 505
++IDT + Q +G + L+ S LY+GGV + K H+ +G+ + S D
Sbjct: 683 VKIDTKITTQITAGAR--NLDLKSDLYIGGVAKETYKSLPKLVHAKEGF-QGCLASVDLN 739
Query: 506 VKLPLSRSQGSSCQLTCETLNTG-QVTC 532
+LP S C E G TC
Sbjct: 740 GRLPDLISDALFCNGQIERGCEGPSTTC 767
Score = 58 (25.5 bits), Expect = 0.00085, Sum P(3) = 0.00085
Identities = 10/45 (22%), Positives = 22/45 (48%)
Query: 364 DFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGVWHRLTVHRN 408
DF A+ + +G+ +++ Q K+N+G W+ + R+
Sbjct: 219 DFFAIEMLDGHLYLLLDMGSGTIKIKALQKKVNDGEWYHVDFQRD 263
Score = 41 (19.5 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 8/28 (28%), Positives = 16/28 (57%)
Query: 11 DDWNTVRVFRHRWDAWIQLNDGNKIKGR 38
++W+TVRV R + ++D + G+
Sbjct: 487 NEWHTVRVVRRGKSLKLTVDDQQAMTGQ 514
>UNIPROTKB|F1PDN4 [details] [associations]
symbol:CNTNAP1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0050885 "neuromuscular process
controlling balance" evidence=IEA] [GO:0050884 "neuromuscular
process controlling posture" evidence=IEA] [GO:0048812 "neuron
projection morphogenesis" evidence=IEA] [GO:0033270 "paranode
region of axon" evidence=IEA] [GO:0030913 "paranodal junction
assembly" evidence=IEA] [GO:0008088 "axon cargo transport"
evidence=IEA] [GO:0008076 "voltage-gated potassium channel complex"
evidence=IEA] [GO:0007010 "cytoskeleton organization" evidence=IEA]
[GO:0002175 "protein localization to paranode region of axon"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA]
InterPro:IPR000421 InterPro:IPR000742 Pfam:PF00754 PROSITE:PS01285
PROSITE:PS01286 PROSITE:PS50022 PROSITE:PS50026 SMART:SM00181
SMART:SM00231 INTERPRO:IPR002181 GO:GO:0007165 GO:GO:0007010
GO:GO:0008088 GO:GO:0050885 GO:GO:0007155 GO:GO:0048812
GO:GO:0008076 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 InterPro:IPR008979
SUPFAM:SSF49785 InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025
Gene3D:3.90.215.10 InterPro:IPR014716 SUPFAM:SSF56496
PROSITE:PS51406 GO:GO:0033270 Pfam:PF02210 InterPro:IPR003585
SMART:SM00294 GO:GO:0030913 GO:GO:0002175 GO:GO:0050884 OMA:RHDLHYH
GeneTree:ENSGT00560000076804 EMBL:AAEX03006444
Ensembl:ENSCAFT00000023588 Uniprot:F1PDN4
Length = 1378
Score = 161 (61.7 bits), Expect = 3.6e-11, Sum P(2) = 3.6e-11
Identities = 66/233 (28%), Positives = 100/233 (42%)
Query: 64 SSYCLCPLGFTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQYLSLLDLTIVFKAIEPNGIL 123
+ + L PL GD R F+ + LR+ + + LD++ F+ P+G+
Sbjct: 769 AQFFLRPLRCYGD----RNSWNTISFHTGAALRFPPIRANHS--LDVSFYFRTSAPSGVF 822
Query: 124 LYN--GHRADGVGDFIALYLN-DRYVDFTFDLGTGAATLR-SSNPISLG--EWHKLRLTR 177
L N G ++ + LN R V F FD+G G L S+ EWH +R
Sbjct: 823 LENMGGPYCQWRRPYVRVELNTSRDVVFAFDVGNGDENLTVHSDDFEFNDDEWHLVRAEI 882
Query: 178 TGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKV 237
+ A L+VD P +L P P P Y + S ++K + F+GC++ +
Sbjct: 883 NVKQARLRVDHRP--WVLRPMPLQTYIWLEYDQ----PLY-VGSAELK-RRPFVGCLRAM 934
Query: 238 LINNHELNILGEA--IQGVN---VVNCAHPCITQPC-GSGSCVPLYDGYKCVC 284
+N LN+ G A +G + +CAHP PC G CV Y Y C C
Sbjct: 935 RLNGMTLNLEGRANASEGTSPNCTGHCAHPRF--PCFHGGRCVERYSYYTCDC 985
Score = 131 (51.2 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 52/191 (27%), Positives = 86/191 (45%)
Query: 71 LGFTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQYLSLLDL-TIVFKAIEPNGILLYNGHR 129
LG G C + D V F+G + Y+ SL D+ FK E +G+LL+
Sbjct: 163 LGLYG--CPYKSD--VLYFDGDDAISYRFPRGVSRSLWDVFAFSFKTEEKDGLLLH---- 214
Query: 130 ADGV-GDFIALYLNDRYVDFTFDLGT-------GAATLRSSNPISLGEWHKLRLTRTGRH 181
A+GV GD+I L L ++ LG+ G T+ + ++ WH +R+ R GR
Sbjct: 215 AEGVQGDYITLELQGAHLLLHMSLGSSPIQPRPGHTTVSAGGVLNDQHWHYVRVDRFGRE 274
Query: 182 AYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINN 241
A L +D + +L+ G F + GG+ + + +F GCI+ ++ N
Sbjct: 275 ANLTLDGYVQRFVLN-GDFERLNLDNEMFIGGL--VGAAQKNLAYRHNFRGCIENIIFNR 331
Query: 242 HELNILGEAIQ 252
+NI A++
Sbjct: 332 --VNIADLAVR 340
Score = 113 (44.8 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 34/138 (24%), Positives = 67/138 (48%)
Query: 109 DLTIVFKAIEPNGILLYNGHRADGVGDFIALYLN-DRYVDFTFDLGTGAATLR-SSNPIS 166
+++ F +LLY + V D++A+ + D + + LGT + ++ P++
Sbjct: 1083 EVSFSFSTDSAPAVLLYV---SSFVRDYMAVLIKEDGTLQLRYQLGTSPYVYQLTTRPVT 1139
Query: 167 LGEWHKLRLTRTGRHAYLQVDRFP-SSQILSPGPFTQXXXXXXXXXGGVPDYNIVSPKVK 225
G+ H + +TR R+ ++QVD FP + Q S +Q G V + ++ P+++
Sbjct: 1140 DGQPHSVNITRVYRNLFIQVDYFPLTEQKFSLLVDSQLDSPKALYLGRVMETGVIDPEIQ 1199
Query: 226 IKSS--FIGCIQKVLINN 241
++ F GC+ V NN
Sbjct: 1200 RYNTPGFSGCLSGVRFNN 1217
Score = 81 (33.6 bits), Expect = 3.6e-11, Sum P(2) = 3.6e-11
Identities = 14/41 (34%), Positives = 21/41 (51%)
Query: 43 LEDKCNKTPCEHGGKCITTPGSSYCLCPL-GFTGDLCQTRL 82
+ D+C+ CEH G+C + C C L G+ G+ C L
Sbjct: 540 ITDRCSPNMCEHDGRCYQSWDDFICYCELTGYKGETCHQPL 580
Score = 68 (29.0 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 16/48 (33%), Positives = 21/48 (43%)
Query: 33 NKIKGRSKECLEDKCN-KTPCEHGGKCITTPGSSYCLCPL-GFTGDLC 78
N +G S C + + PC HGG+C+ C C L F G C
Sbjct: 948 NASEGTSPNCTGHCAHPRFPCFHGGRCVERYSYYTCDCDLTAFDGPYC 995
Score = 59 (25.8 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 13/65 (20%), Positives = 26/65 (40%)
Query: 339 FNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNG 398
F + R +T +GL+L++ + L + G +V ++N+G
Sbjct: 383 FAVSFRFRTWDLTGLLLFSRLGDGLGHVELMLSEGQVNVSIAQTGRKKLQFAAGYRLNDG 442
Query: 399 VWHRL 403
WH +
Sbjct: 443 FWHEV 447
>UNIPROTKB|F1NWW5 [details] [associations]
symbol:FAT1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0007156
"homophilic cell adhesion" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005911 "cell-cell
junction" evidence=IEA] [GO:0007015 "actin filament organization"
evidence=IEA] [GO:0007163 "establishment or maintenance of cell
polarity" evidence=IEA] [GO:0030027 "lamellipodium" evidence=IEA]
[GO:0030175 "filopodium" evidence=IEA] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA] InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR002126 InterPro:IPR015919
InterPro:IPR018097 InterPro:IPR020894 Pfam:PF00008 Pfam:PF00028
Pfam:PF07645 PRINTS:PR00205 PROSITE:PS00232 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS50268 SMART:SM00112 SMART:SM00179
SMART:SM00181 InterPro:IPR000152 GO:GO:0016021 GO:GO:0005886
GO:GO:0005634 GO:GO:0048471 GO:GO:0007015 GO:GO:0007163
GO:GO:0005509 GO:GO:0005911 GO:GO:0030027 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030175 PROSITE:PS01186
InterPro:IPR001791 SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025
GO:GO:0007156 SUPFAM:SSF49313 Gene3D:2.60.40.60
GeneTree:ENSGT00700000104156 Pfam:PF02210 OMA:PYEAFIV
EMBL:AADN02031427 EMBL:AADN02031428 IPI:IPI00591842
Ensembl:ENSGALT00000022100 ArrayExpress:F1NWW5 Uniprot:F1NWW5
Length = 4592
Score = 196 (74.1 bits), Expect = 4.0e-11, P = 4.0e-11
Identities = 65/264 (24%), Positives = 113/264 (42%)
Query: 47 CNKTPCEHGGKCITTP--GSSYCLCPLGFTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQY 104
C PC G +CI P G C+C TG C + V F+G+SY++Y+ + +
Sbjct: 3797 CEGNPCPEGTECIGDPKEGKYTCVCHDSKTGQ-CPASVGSAVT-FSGNSYVKYRLMENEN 3854
Query: 105 LSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLR-SSN 163
+ LT+ + + +++Y A G D+ L ++ + + FD G+G + S
Sbjct: 3855 KEEMKLTMRLRTYSAHAVVMY----ARGT-DYSILEIHHGRLQYKFDCGSGPGIVSVQSI 3909
Query: 164 PISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGG-VPDYNIVSP 222
I+ G+WH + L G +A L +DR ++ +PG GG +
Sbjct: 3910 QINDGQWHSVSLEVDGNYARLVLDRVHTASGTAPGTLRTLNLDNHVFFGGHIRQQGTRHG 3969
Query: 223 KV-KIKSSFIGCIQKVLINNHELNI------LGEAIQGVNVV-NC----AHPCITQPCGS 270
+ ++ + F GC+ +++N EL + + V+V C C + PC +
Sbjct: 3970 RSPQVSNGFRGCMDSIVLNGQELPLNSKPRNYAHMEESVDVTPGCILTTTEGCSSNPCQN 4029
Query: 271 GS-CVPLYDG-YKCVCTQSCKESH 292
G C L +G Y C C +H
Sbjct: 4030 GGICNALSNGGYYCKCAPLFMGTH 4053
>UNIPROTKB|E2R353 [details] [associations]
symbol:FAT1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007156 "homophilic cell adhesion" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005509 "calcium ion binding"
evidence=IEA] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR002126 InterPro:IPR015919 InterPro:IPR018097
InterPro:IPR020894 Pfam:PF00008 Pfam:PF00028 Pfam:PF07645
PRINTS:PR00205 PROSITE:PS00232 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS50268 SMART:SM00112 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 GO:GO:0016021 GO:GO:0005886 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 InterPro:IPR001791 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 GO:GO:0007156 SUPFAM:SSF49313 Gene3D:2.60.40.60
Pfam:PF02210 ProteinModelPortal:E2R353 Ensembl:ENSCAFT00000011726
Uniprot:E2R353
Length = 4591
Score = 193 (73.0 bits), Expect = 4.0e-11, Sum P(2) = 4.0e-11
Identities = 62/257 (24%), Positives = 112/257 (43%)
Query: 47 CNKTPCEHGGKCITTPGSS-Y-CLCPLGFTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQY 104
C +PC G +CIT PG Y C+CP G G C + F G+S+++Y+ + +
Sbjct: 3797 CEDSPCPEGSECITEPGEDRYTCVCPGGRFGQ-CPGSSSVT---FTGNSFVKYRLMENEN 3852
Query: 105 LSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLR-SSN 163
+ LT+ + + +++Y A G D+ L +++ + + FD G+G + S
Sbjct: 3853 KLEMKLTMRLRTYSAHAVVMY----ARGT-DYSILEIHNGRLQYKFDCGSGPGIVSVQSI 3907
Query: 164 PISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGG-VPDYNIVSP 222
++ G WH + L G +A L +D+ ++ +PG GG +
Sbjct: 3908 QVNDGLWHAVSLEVNGNYARLVLDQVHTASGTAPGTLKTLNLDNHVFFGGHIRQQGTRHG 3967
Query: 223 K-VKIKSSFIGCIQKVLINNHELNI------LGEAIQGVNV-----VNCAHPCITQPCGS 270
+ ++ + F GC+ + +N EL + + V+V + C + PC +
Sbjct: 3968 RSAQVGNGFRGCMDSIYLNGQELPLNNKPRSYAHVEEWVDVSPGCLLTATEDCSSSPCQN 4027
Query: 271 GS-CVPL-YDGYKCVCT 285
G C P GY C C+
Sbjct: 4028 GGICHPSPTGGYYCKCS 4044
Score = 58 (25.5 bits), Expect = 4.0e-11, Sum P(2) = 4.0e-11
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 263 CITQPCGSGS-CVPLYDGYKCVCTQSCKESH 292
C PC +G+ C + Y C C+Q + H
Sbjct: 4134 CAASPCRNGALCENTHGSYHCNCSQDYRGRH 4164
Score = 49 (22.3 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 9/23 (39%), Positives = 11/23 (47%)
Query: 263 CITQPC-GSGSCVPLYDGYKCVC 284
C +PC G+C DG C C
Sbjct: 4096 CKDEPCKNGGTCFDSLDGAVCQC 4118
Score = 45 (20.9 bits), Expect = 8.9e-10, Sum P(2) = 8.9e-10
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 261 HPCITQPC-GSGSCVP-----------LYDGYKCVCTQSCKE 290
+PC + PC G+C+ LY G +C + CK+
Sbjct: 4057 NPCSSNPCLYGGTCIVDNGDFVCQCRGLYTGQRCQLSPYCKD 4098
>RGD|2321568 [details] [associations]
symbol:LOC100364190 "mKIAA0868 protein-like" species:10116
"Rattus norvegicus" [GO:0005769 "early endosome" evidence=ISS]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0007420 "brain
development" evidence=IC] [GO:0008076 "voltage-gated potassium
channel complex" evidence=IDA] [GO:0009986 "cell surface"
evidence=ISS] [GO:0016020 "membrane" evidence=IDA] [GO:0019899
"enzyme binding" evidence=IPI] [GO:0030424 "axon" evidence=IDA]
[GO:0030425 "dendrite" evidence=IDA] [GO:0030673 "axolemma"
evidence=IDA] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0043204 "perikaryon" evidence=IDA] [GO:0044224 "juxtaparanode
region of axon" evidence=IDA] InterPro:IPR000742 PROSITE:PS50026
SMART:SM00181 RGD:2321568 GO:GO:0005794 GO:GO:0009986 GO:GO:0007420
GO:GO:0030425 GO:GO:0043204 GO:GO:0030673 GO:GO:0008076
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025
GO:GO:0031175 GO:GO:0005769 GO:GO:0021756 Pfam:PF02210
InterPro:IPR003585 SMART:SM00294 GO:GO:0044224
GeneTree:ENSGT00560000076804 GO:GO:0021761 GO:GO:0071205
GO:GO:0071109 GO:GO:0021794 GO:GO:0071625 IPI:IPI00959330
Ensembl:ENSRNOT00000008688 ArrayExpress:F1LTJ9 Uniprot:F1LTJ9
Length = 537
Score = 185 (70.2 bits), Expect = 4.1e-11, P = 4.1e-11
Identities = 63/230 (27%), Positives = 98/230 (42%)
Query: 90 NGSSYLRYQGL-GEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYL-NDRYVD 147
N SSYL + GE + D++ FK + P G+ L N G DFI L L + V
Sbjct: 10 NPSSYLHFSTFQGE---TSADISFYFKTLIPRGVFLENL----GNTDFIKLELKSSTEVS 62
Query: 148 FTFDLGTGAATL--RSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGP-FTQXX 204
F+FD+G G + RS +P++ +WH++ R + A LQVDR P +P T+
Sbjct: 63 FSFDVGNGPVEIVVRSPSPLNDDQWHRVTAERNVKQASLQVDRLPQQIRKAPTEGHTRLE 122
Query: 205 XXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEA-IQGVNVVNCAHPC 263
GG + F+GCI+ + +N L++ A + C+ C
Sbjct: 123 LYSQLFVGGAGG----------QQGFLGCIRSLRMNGVTLDLEERAKVTSGFKSGCSGHC 172
Query: 264 ITQP--C-GSGSCVPLYDGYKCVCTQSCKESHLTEVMCASFDHGASFLHY 310
+ C G C+ Y GY C C+ + + +F +L Y
Sbjct: 173 TSYGANCENGGKCIEKYHGYSCDCSNTAYDGTFCNKDVGAFFEEGMWLRY 222
>UNIPROTKB|I3LR37 [details] [associations]
symbol:LOC100620189 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0007416 "synapse assembly" evidence=IEA]
[GO:0007268 "synaptic transmission" evidence=IEA] [GO:0004872
"receptor activity" evidence=IEA] InterPro:IPR000742
InterPro:IPR027149 PROSITE:PS50026 SMART:SM00181
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025
Pfam:PF02210 GeneTree:ENSGT00560000076996 PANTHER:PTHR10127:SF405
EMBL:FP085423 Ensembl:ENSSSCT00000025256 OMA:TIAIRIY Uniprot:I3LR37
Length = 294
Score = 178 (67.7 bits), Expect = 4.3e-11, P = 4.3e-11
Identities = 53/205 (25%), Positives = 93/205 (45%)
Query: 92 SSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFD 151
SSYL L + Y S+ L FK +G +L+N DG DFIA+ L Y+ + FD
Sbjct: 79 SSYLSLATL-QAYTSM-HLFFQFKTTSADGFILFNS--GDG-NDFIAVELVKGYIHYVFD 133
Query: 152 LGTGAATLR--SSNPISLGEWHKLRLTRTGRHAY-LQVDRFPSSQILSPGPFTQXXXXXX 208
LG G ++ S P++ +WH + +TR + + L+VD +Q+++
Sbjct: 134 LGNGPNVIKGNSDRPLNDNQWHNVVITRDNSNTHSLKVDTKVVTQVINGAKNLDLKGDLY 193
Query: 209 XXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVN--CAHP---C 263
Y+ + V + F GC+ V +N +++ +A+ + C P C
Sbjct: 194 MAGLAQGMYSNLPKLVASRDGFQGCLASVDLNGRLPDLINDALHRSGQIERGCEGPSTTC 253
Query: 264 ITQPCGS-GSCVPLYDGYKCVCTQS 287
C + G C+ ++G+ C C+ +
Sbjct: 254 QEDSCANQGVCMQQWEGFTCDCSMT 278
>ZFIN|ZDB-GENE-070206-3 [details] [associations]
symbol:nrxn1b "neurexin 1b" species:7955 "Danio
rerio" [GO:0051965 "positive regulation of synapse assembly"
evidence=IEA] [GO:0007269 "neurotransmitter secretion"
evidence=IEA] [GO:0090129 "positive regulation of synapse
maturation" evidence=IEA] [GO:0007416 "synapse assembly"
evidence=IEA] [GO:0007268 "synaptic transmission" evidence=IEA]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR000742
InterPro:IPR027158 Pfam:PF00008 PROSITE:PS50026 SMART:SM00181
ZFIN:ZDB-GENE-070206-3 GO:GO:0016021 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025 Pfam:PF02210
InterPro:IPR003585 SMART:SM00294 GeneTree:ENSGT00560000076996
PANTHER:PTHR10127:SF309 EMBL:AL929536 EMBL:CU462915 IPI:IPI01023375
Ensembl:ENSDART00000149547 Bgee:F8W597 Uniprot:F8W597
Length = 1475
Score = 186 (70.5 bits), Expect = 4.3e-10, Sum P(2) = 4.3e-10
Identities = 80/323 (24%), Positives = 138/323 (42%)
Query: 92 SSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFD 151
SSY+ L Y + L FK +G++LYN DG DFIA+ L Y+ + D
Sbjct: 887 SSYVTLPSLQAYYY--MYLFFQFKTTSADGLILYNS--GDG-NDFIAVELVKGYLHYISD 941
Query: 152 LGTGAATLRSSN--PISLGEWHKLRLTRTGRHAY-LQVDRFPSSQILSPGPFTQXXXXXX 208
LG GA ++ ++ P++ WH + ++R + + +++D +SQ + G
Sbjct: 942 LGNGAHLIKGNSIKPLNDNHWHNVMISRDPNNLHTVRIDTKTTSQT-TLGA-KNLDLKGD 999
Query: 209 XXXGGVPD--YNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVN--CAHP-- 262
GGVP+ Y + V K F GC+ V +N +++ EA+ V + C P
Sbjct: 1000 LFVGGVPEQMYKDLPKLVHAKEGFQGCLASVDLNGRLPDLMTEALVCVGQIERGCEGPSS 1059
Query: 263 -CITQPCGS-GSCVPLYDGYKCVCTQSCKESHLTEVMCASFDHGASFLHYLDPEIIHSSG 320
C C + G C+ ++ + C C+ + L CA D G++++ +I S
Sbjct: 1060 SCEEDSCANQGVCLQQWENFTCDCSMTTYAGPL----CA--DPGSTYVFGRQGGVITYSW 1113
Query: 321 LLHYKFQLHVDFRITGYEFNID--MRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVM 378
H + VD G+ ++ ++ SS+GL G D+L L I G +
Sbjct: 1114 PPHDRPSTRVDRLALGFITLMEDATLVRVDSSAGL----G-----DYLKLHIVKGNVVAV 1164
Query: 379 YXXXXXXXXXXXXQTKINNGVWH 401
+ +N+G +H
Sbjct: 1165 FNVGTYDINIEENGKLVNDGNYH 1187
Score = 167 (63.8 bits), Expect = 4.7e-11, Sum P(3) = 4.7e-11
Identities = 65/257 (25%), Positives = 111/257 (43%)
Query: 23 WDAWIQLNDGNKIKGRSKECLEDKC-NKTPCEHGGKCITTPGSSYCLCP-LGFTGDLCQT 80
W +++ND S ED C ++ C +GG C C C G+ G C
Sbjct: 181 WIMDVKVNDSEPAIISSAGVHEDLCGSENTCLNGGVCSVVEDKPTCDCSQTGYQGKDCSE 240
Query: 81 RL----------DLQVPQFNGSSYLRYQ-GLGEQYLSLLDLTIVFKAIEPNGILLYNGHR 129
L + V F GS Y Y L S ++T+ F+ ++ NG++L+ G
Sbjct: 241 GLAHLMMLDRGMEEYVATFRGSEYFCYDLSLNPIQSSSDEITLSFRTLQRNGLMLHTGK- 299
Query: 130 ADGVGDFIALYLNDRYVDFTFDLGTGA--ATLRSSN-PISLGEWHKLRLTRTGR-HA--- 182
+ D++ L L + V +LG+GA A + N + EWH +++ R R H+
Sbjct: 300 ---IADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNEWHDVKVLRNLRQHSGVG 356
Query: 183 Y----LQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVL 238
Y + VD ++ + +T GG P + P+ + ++F+GC+++V+
Sbjct: 357 YAMVTISVDGILTTTGYTQEEYTMLGSDDFLYVGGSPSTADL-PESPVSNNFMGCLREVV 415
Query: 239 INNH--ELNILGEAIQG 253
N+ EL + A QG
Sbjct: 416 YKNNDAELELSRLAYQG 432
Score = 149 (57.5 bits), Expect = 9.0e-09, Sum P(2) = 9.0e-09
Identities = 82/353 (23%), Positives = 141/353 (39%)
Query: 82 LDLQVPQFNGSSYLRYQGLGEQYLSL--------LDLTIVFKAIEPNGILLYNGHRADGV 133
+ L V + N S LR+ G EQ+++ +++ K NG+L+Y +G
Sbjct: 18 IGLIVCKANAGSSLRFTGSDEQWVAFPMWNACCESEMSFSVKTTHLNGLLVYFDD--EGF 75
Query: 134 GDFIALYLNDRYVDFTFDLGTGAAT-LRSSNPISLGEWHKLRLTRTGRHAYLQVD-RFPS 191
DF+ L+++ + F + +T + S I+ WH + + R R+ L VD
Sbjct: 76 CDFLELHVHVGKLRLCFSIFCAESTCVLSDVAINDNRWHSVSIMRNFRNTTLIVDDEVKW 135
Query: 192 SQILSPGPFTQXXXXXXXXXGGVPD------YNIVSPKVKIKSSFIGCIQKVLINNHELN 245
++ S GG+P + S VK +SF G I V +N+ E
Sbjct: 136 EEVKSQR--RDMTVFSHLFLGGIPSELRSVSLQLTSKTVKDHTSFTGWIMDVKVNDSEPA 193
Query: 246 ILGEAIQGVNVVNCA--HPCITQPCGSGSCVPLYDGYKCVCTQS------CKESHLTEVM 297
I+ A GV+ C + C+ G C + D C C+Q+ C E L +M
Sbjct: 194 IISSA--GVHEDLCGSENTCLN----GGVCSVVEDKPTCDCSQTGYQGKDCSEG-LAHLM 246
Query: 298 CASFDHGASFLHYLDPEIIHSSGLLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWT 357
D G ++ + G ++ + L ++ I I + +T +GL+L T
Sbjct: 247 M--LDRG------MEEYVATFRGSEYFCYDLSLN-PIQSSSDEITLSFRTLQRNGLMLHT 297
Query: 358 GSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQT--KINNGVWHRLTVHRN 408
G + D++ L + NG ++ K N+ WH + V RN
Sbjct: 298 G--KIADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNEWHDVKVLRN 348
Score = 142 (55.0 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 55/205 (26%), Positives = 85/205 (41%)
Query: 46 KCNKTPCEHGGKCITTPGSSYCLCP-LGFTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQY 104
KC PC + G C C C GF G C+ D + F+GS +L+ Q +
Sbjct: 653 KCVSEPCLNRGVCREGWSRYICDCTGTGFLGHSCER--DATILSFDGSKFLKVQFSAAMH 710
Query: 105 LSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSN- 163
D+++ F+++ G+L+ + + D + L L V T +L +S
Sbjct: 711 TEAEDVSLRFRSLRAYGVLMAS--TSTHTTDTLRLELEAGRVRLTVNLDCNRINCTTSKG 768
Query: 164 PISL--G------EWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVP 215
P SL G EWH +R+ R G+ L VD P+ PG TQ G+
Sbjct: 769 PESLFAGQNLNDDEWHTVRVIRRGKSLKLSVDDLPTVDGEIPGDHTQLEFHNIET--GII 826
Query: 216 DYNIVSPKVKIKSSFIGCIQKVLIN 240
P + S+FIG +Q ++ N
Sbjct: 827 TGKRQLPTMP--SNFIGHLQSLMFN 849
Score = 110 (43.8 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 62/280 (22%), Positives = 111/280 (39%)
Query: 114 FKAIEPNGILLYN-G----HRADGVG------DFIALYLNDRYVDFTFDLGTGAA-TLRS 161
F+ EPNG+LL++ G H + DF A+ + D + D+G+G TL
Sbjct: 481 FRTTEPNGLLLFSCGRAKQHNKEAKSPVTLKVDFFAIEMLDGLLYLLLDMGSGTTKTLAL 540
Query: 162 SNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVS 221
+ ++ GEW+ + R G+ + ++ + L PG GGVP+ + S
Sbjct: 541 NKKVNDGEWYHVDFQRDGKSGTISINSV-RTPYLCPGDSELLDLDDPLYLGGVPESS--S 597
Query: 222 PKVKIKSSFIGCIQKVLINN-HELNILGEAIQGVNVVNCAHPCITQP-CGS---GSCVPL 276
V ++ + + +L I G ++ +P CG G CV
Sbjct: 598 GTVFPTGAWSALLNYGYVGCVRDLFIDGRSVDVRRAAELQRAAGVKPSCGKEPPGKCV-- 655
Query: 277 YDGYKCVCTQSCKESHLTEVMCASFDHGASFLHYL---DPEIIHSSGLLHYKFQLHVDFR 333
C+ C+E + +C G FL + D I+ G K Q
Sbjct: 656 --SEPCLNRGVCREGW-SRYICDCT--GTGFLGHSCERDATILSFDGSKFLKVQFSAAMH 710
Query: 334 ITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNG 373
T E ++ +R ++ + G+++ + S+ + D L L + G
Sbjct: 711 -TEAE-DVSLRFRSLRAYGVLMASTSTHTTDTLRLELEAG 748
Score = 71 (30.1 bits), Expect = 9.0e-09, Sum P(2) = 9.0e-09
Identities = 22/87 (25%), Positives = 38/87 (43%)
Query: 428 EFKCLSIQRLHRTGKQCLIRIDTD--YSMQSISGGKFEQLNTDSGLYVGGVEDIEELTRS 485
+ K L R H ++ I D + + ++ L +D LYVGG +L S
Sbjct: 342 DVKVLRNLRQHSGVGYAMVTISVDGILTTTGYTQEEYTMLGSDDFLYVGGSPSTADLPES 401
Query: 486 KYHHSFKGWISNLILSNDYQVKLPLSR 512
++F G + ++ N+ +L LSR
Sbjct: 402 PVSNNFMGCLREVVYKNN-DAELELSR 427
Score = 63 (27.2 bits), Expect = 4.7e-11, Sum P(3) = 4.7e-11
Identities = 22/73 (30%), Positives = 34/73 (46%)
Query: 446 IRIDTDYSMQSISGGKFEQLNTDSGLYVGGVEDIEELTRSKYHHSFKGWISNLILSNDYQ 505
+RIDT + Q+ G K L D L+VGGV + K H+ +G+ + S D
Sbjct: 977 VRIDTKTTSQTTLGAKNLDLKGD--LFVGGVPEQMYKDLPKLVHAKEGF-QGCLASVDLN 1033
Query: 506 VKLPLSRSQGSSC 518
+LP ++ C
Sbjct: 1034 GRLPDLMTEALVC 1046
Score = 56 (24.8 bits), Expect = 4.7e-11, Sum P(3) = 4.7e-11
Identities = 15/68 (22%), Positives = 28/68 (41%)
Query: 364 DFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGVWHRLTVHRNFMVVMHGSSHTRSNK 423
DF A+ + +G +++ K+N+G W+ + R+ G S T S
Sbjct: 513 DFFAIEMLDGLLYLLLDMGSGTTKTLALNKKVNDGEWYHVDFQRD------GKSGTISIN 566
Query: 424 SSKIEFKC 431
S + + C
Sbjct: 567 SVRTPYLC 574
Score = 50 (22.7 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 20/74 (27%), Positives = 37/74 (50%)
Query: 409 FMVVMHGSSHTRS---NKS-SKIEFKCLSIQRLHRTGKQCLIRIDTDYSMQSISGGKFEQ 464
++++ GS T++ NK + E+ + QR ++G + + T Y + G E
Sbjct: 525 YLLLDMGSGTTKTLALNKKVNDGEWYHVDFQRDGKSGTISINSVRTPY----LCPGDSEL 580
Query: 465 LNTDSGLYVGGVED 478
L+ D LY+GGV +
Sbjct: 581 LDLDDPLYLGGVPE 594
Score = 45 (20.9 bits), Expect = 4.3e-10, Sum P(2) = 4.3e-10
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 11 DDWNTVRVFRHRWDAWIQLNDGNKIKG 37
D+W+TVRV R + ++D + G
Sbjct: 781 DEWHTVRVIRRGKSLKLSVDDLPTVDG 807
>UNIPROTKB|F1MJQ2 [details] [associations]
symbol:CNTNAP1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050885 "neuromuscular process controlling balance"
evidence=IEA] [GO:0050884 "neuromuscular process controlling
posture" evidence=IEA] [GO:0048812 "neuron projection
morphogenesis" evidence=IEA] [GO:0033270 "paranode region of axon"
evidence=IEA] [GO:0030913 "paranodal junction assembly"
evidence=IEA] [GO:0008088 "axon cargo transport" evidence=IEA]
[GO:0008076 "voltage-gated potassium channel complex" evidence=IEA]
[GO:0007010 "cytoskeleton organization" evidence=IEA] [GO:0002175
"protein localization to paranode region of axon" evidence=IEA]
[GO:0007155 "cell adhesion" evidence=IEA] InterPro:IPR000421
InterPro:IPR000742 Pfam:PF00754 PROSITE:PS01285 PROSITE:PS01286
PROSITE:PS50022 PROSITE:PS50026 SMART:SM00181 SMART:SM00231
INTERPRO:IPR002181 GO:GO:0007165 GO:GO:0007010 GO:GO:0008088
GO:GO:0050885 GO:GO:0007155 GO:GO:0048812 GO:GO:0008076
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 InterPro:IPR008979 SUPFAM:SSF49785
InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025 Gene3D:3.90.215.10
InterPro:IPR014716 SUPFAM:SSF56496 PROSITE:PS51406 GO:GO:0033270
Pfam:PF02210 InterPro:IPR003585 SMART:SM00294 GO:GO:0030913
GO:GO:0002175 GO:GO:0050884 CTD:8506 KO:K07379 OMA:RHDLHYH
GeneTree:ENSGT00560000076804 EMBL:DAAA02049191 EMBL:DAAA02049192
IPI:IPI01001593 RefSeq:NP_001193824.1 UniGene:Bt.46498
Ensembl:ENSBTAT00000025424 GeneID:540997 KEGG:bta:540997
NextBio:20878954 Uniprot:F1MJQ2
Length = 1388
Score = 160 (61.4 bits), Expect = 4.7e-11, Sum P(2) = 4.7e-11
Identities = 66/233 (28%), Positives = 100/233 (42%)
Query: 64 SSYCLCPLGFTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQYLSLLDLTIVFKAIEPNGIL 123
+ + L PL GD R F+ + LR+ + + LD++ F+ P+G+
Sbjct: 769 AQFFLRPLRCYGD----RNSWNTISFHTGAALRFPPIRANHS--LDVSFYFRTSAPSGVF 822
Query: 124 LYN--GHRADGVGDFIALYLN-DRYVDFTFDLGTGAATLR-SSNPISLG--EWHKLRLTR 177
L N G ++ + LN R V F FD+G G L S+ EWH +R
Sbjct: 823 LENMGGPYCQWRRPYVRVELNTSRDVVFAFDVGNGDENLTVHSDDFEFNDDEWHLVRAEI 882
Query: 178 TGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKV 237
+ A L+VD P +L P P P Y + S ++K + F+GC++ +
Sbjct: 883 NVKQARLRVDHRP--WVLRPMPLQTYIWLEYDR----PLY-VGSAELK-RRPFVGCLRAM 934
Query: 238 LINNHELNILGEA--IQGVN---VVNCAHPCITQPC-GSGSCVPLYDGYKCVC 284
+N LN+ G A +G + +CAHP PC G CV Y Y C C
Sbjct: 935 RLNGVTLNLEGRANASEGTSPNCTGHCAHPRF--PCFHGGRCVERYSYYTCDC 985
Score = 127 (49.8 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 51/191 (26%), Positives = 85/191 (44%)
Query: 71 LGFTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQYLSLLDL-TIVFKAIEPNGILLYNGHR 129
LG G C + D V F+G + Y+ SL D+ FK E +G+LL+
Sbjct: 163 LGLYG--CPYKSD--VLYFDGDDAISYRFPRGVSRSLWDVFAFSFKTEEKDGLLLH---- 214
Query: 130 ADGV-GDFIALYLNDRYVDFTFDLGT-------GAATLRSSNPISLGEWHKLRLTRTGRH 181
A+G GD++ L L ++ LG+ G T+ + ++ WH +R+ R GR
Sbjct: 215 AEGAQGDYVTLELQGAHLLLHMSLGSSPIQPRPGHTTVSAGGVLNDQHWHYVRVDRFGRE 274
Query: 182 AYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINN 241
A L +D + +L+ G F + GG+ + + +F GCI+ V+ N
Sbjct: 275 ANLTLDGYVQRFVLN-GDFERLNLDNEMFIGGL--VGAAQKNLAYRHNFRGCIENVIFNR 331
Query: 242 HELNILGEAIQ 252
+NI A++
Sbjct: 332 --VNIADLAVR 340
Score = 105 (42.0 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 33/138 (23%), Positives = 66/138 (47%)
Query: 109 DLTIVFKAIEPNGILLYNGHRADGVGDFIALYLN-DRYVDFTFDLGTGAATLR-SSNPIS 166
+++ F +LLY + V D++A+ + D + + LGT + ++ P++
Sbjct: 1083 EVSFSFSTQSAPAVLLYV---SSFVRDYMAVLIKEDGTLQLRYQLGTSPYVYQLTTRPVT 1139
Query: 167 LGEWHKLRLTRTGRHAYLQVDRFP-SSQILSPGPFTQXXXXXXXXXGGVPDYNIVSPKVK 225
G+ H + +TR R+ ++QVD F + Q S +Q G V + ++ P+++
Sbjct: 1140 DGQPHSVNITRVYRNLFIQVDYFSLTEQKFSLLVDSQLDSPKALYLGRVMETGVIDPEIQ 1199
Query: 226 IKSS--FIGCIQKVLINN 241
++ F GC+ V NN
Sbjct: 1200 RYNTPGFSGCLSGVRFNN 1217
Score = 81 (33.6 bits), Expect = 4.7e-11, Sum P(2) = 4.7e-11
Identities = 14/41 (34%), Positives = 21/41 (51%)
Query: 43 LEDKCNKTPCEHGGKCITTPGSSYCLCPL-GFTGDLCQTRL 82
+ D+C+ CEH G+C + C C L G+ G+ C L
Sbjct: 540 ITDRCSPNMCEHDGRCYQSWDDFICYCELTGYKGETCHQPL 580
Score = 68 (29.0 bits), Expect = 0.00078, Sum P(2) = 0.00078
Identities = 16/48 (33%), Positives = 21/48 (43%)
Query: 33 NKIKGRSKECLEDKCN-KTPCEHGGKCITTPGSSYCLCPL-GFTGDLC 78
N +G S C + + PC HGG+C+ C C L F G C
Sbjct: 948 NASEGTSPNCTGHCAHPRFPCFHGGRCVERYSYYTCDCDLTAFDGPYC 995
Score = 56 (24.8 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 12/63 (19%), Positives = 25/63 (39%)
Query: 341 IDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGVW 400
+ R +T +GL+L++ + L + G +V ++N+G W
Sbjct: 385 VSFRFRTWDLTGLLLFSSLGDGLGHVELMLSEGQVNVSVVQTGRKKLQFAAGFRLNDGFW 444
Query: 401 HRL 403
H +
Sbjct: 445 HEV 447
>UNIPROTKB|F6XXM1 [details] [associations]
symbol:FAT1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0008502 "melatonin receptor activity" evidence=IEA] [GO:0007156
"homophilic cell adhesion" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005509 "calcium ion binding"
evidence=IEA] InterPro:IPR000025 InterPro:IPR000276
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR002126
InterPro:IPR002278 InterPro:IPR015919 InterPro:IPR017452
InterPro:IPR018097 InterPro:IPR020894 Pfam:PF00001 Pfam:PF00008
Pfam:PF00028 Pfam:PF07645 PRINTS:PR00205 PRINTS:PR00237
PRINTS:PR00857 PRINTS:PR01149 PROSITE:PS00232 PROSITE:PS00237
PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS50262 PROSITE:PS50268
SMART:SM00112 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0016021 GO:GO:0005886 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186
InterPro:IPR001791 SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025
GO:GO:0007156 SUPFAM:SSF49313 Gene3D:2.60.40.60
GeneTree:ENSGT00700000104156 Pfam:PF02210 OMA:PYEAFIV GO:GO:0008502
Ensembl:ENSCAFT00000011726 EMBL:AAEX03010491 EMBL:AAEX03010490
Uniprot:F6XXM1
Length = 5056
Score = 193 (73.0 bits), Expect = 4.9e-11, Sum P(2) = 4.9e-11
Identities = 62/257 (24%), Positives = 112/257 (43%)
Query: 47 CNKTPCEHGGKCITTPGSS-Y-CLCPLGFTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQY 104
C +PC G +CIT PG Y C+CP G G C + F G+S+++Y+ + +
Sbjct: 3797 CEDSPCPEGSECITEPGEDRYTCVCPGGRFGQ-CPGSSSVT---FTGNSFVKYRLMENEN 3852
Query: 105 LSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLR-SSN 163
+ LT+ + + +++Y A G D+ L +++ + + FD G+G + S
Sbjct: 3853 KLEMKLTMRLRTYSAHAVVMY----ARGT-DYSILEIHNGRLQYKFDCGSGPGIVSVQSI 3907
Query: 164 PISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGG-VPDYNIVSP 222
++ G WH + L G +A L +D+ ++ +PG GG +
Sbjct: 3908 QVNDGLWHAVSLEVNGNYARLVLDQVHTASGTAPGTLKTLNLDNHVFFGGHIRQQGTRHG 3967
Query: 223 K-VKIKSSFIGCIQKVLINNHELNI------LGEAIQGVNV-----VNCAHPCITQPCGS 270
+ ++ + F GC+ + +N EL + + V+V + C + PC +
Sbjct: 3968 RSAQVGNGFRGCMDSIYLNGQELPLNNKPRSYAHVEEWVDVSPGCLLTATEDCSSSPCQN 4027
Query: 271 GS-CVPL-YDGYKCVCT 285
G C P GY C C+
Sbjct: 4028 GGICHPSPTGGYYCKCS 4044
Score = 58 (25.5 bits), Expect = 4.9e-11, Sum P(2) = 4.9e-11
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 263 CITQPCGSGS-CVPLYDGYKCVCTQSCKESH 292
C PC +G+ C + Y C C+Q + H
Sbjct: 4134 CAASPCRNGALCENTHGSYHCNCSQDYRGRH 4164
Score = 49 (22.3 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 9/23 (39%), Positives = 11/23 (47%)
Query: 263 CITQPC-GSGSCVPLYDGYKCVC 284
C +PC G+C DG C C
Sbjct: 4096 CKDEPCKNGGTCFDSLDGAVCQC 4118
Score = 45 (20.9 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 261 HPCITQPC-GSGSCVP-----------LYDGYKCVCTQSCKE 290
+PC + PC G+C+ LY G +C + CK+
Sbjct: 4057 NPCSSNPCLYGGTCIVDNGDFVCQCRGLYTGQRCQLSPYCKD 4098
>UNIPROTKB|G3V8P3 [details] [associations]
symbol:Celsr2 "Cadherin EGF LAG seven-pass G-type receptor
2" species:10116 "Rattus norvegicus" [GO:0001764 "neuron migration"
evidence=IEA] [GO:0004930 "G-protein coupled receptor activity"
evidence=IEA] [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007156 "homophilic
cell adhesion" evidence=IEA] [GO:0007218 "neuropeptide signaling
pathway" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0021591 "ventricular system development"
evidence=IEA] InterPro:IPR000203 InterPro:IPR000742
InterPro:IPR000832 InterPro:IPR001368 InterPro:IPR001879
InterPro:IPR001881 InterPro:IPR002126 InterPro:IPR015919
InterPro:IPR017981 InterPro:IPR020894 Pfam:PF00002 Pfam:PF00008
Pfam:PF00028 Pfam:PF01825 PRINTS:PR00205 PRINTS:PR00249
PROSITE:PS00232 PROSITE:PS50026 PROSITE:PS50221 PROSITE:PS50227
PROSITE:PS50261 PROSITE:PS50268 SMART:SM00008 SMART:SM00112
SMART:SM00179 SMART:SM00181 SMART:SM00208 SMART:SM00303
InterPro:IPR000152 RGD:69237 GO:GO:0016021 GO:GO:0005886
GO:GO:0004930 GO:GO:0007218 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 SMART:SM00180
SMART:SM00282 PROSITE:PS00010 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 GO:GO:0007156 SUPFAM:SSF49313 InterPro:IPR022624
Pfam:PF12003 EMBL:CH473952 Gene3D:2.60.40.60
GeneTree:ENSGT00700000104170 Pfam:PF02210 CTD:1952 KO:K04601
OMA:YILRAYA UniGene:Rn.222746 RefSeq:NP_001178039.1
Ensembl:ENSRNOT00000027263 GeneID:83465 KEGG:rno:83465
NextBio:615853 Uniprot:G3V8P3
Length = 2919
Score = 207 (77.9 bits), Expect = 5.5e-11, Sum P(2) = 5.5e-11
Identities = 75/265 (28%), Positives = 113/265 (42%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQ-FNGSSYLRYQGLGEQYL 105
C+ C +GG C+ + C CPLGF G C ++ PQ F GSS + + GL
Sbjct: 1578 CDSNTCHNGGTCVNQWDAFSCECPLGFGGKSCAQ--EMANPQRFLGSSLVAWHGLSLPIS 1635
Query: 106 SLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTG--AATLR-SS 162
L+++F+ + +G+LL R I L L +V + + GTG A++LR
Sbjct: 1636 QPWHLSLMFRTRQADGVLLQAVTRGRST---ITLQLRAGHVVLSVE-GTGLQASSLRLEP 1691
Query: 163 NPISLGEWH--KLRLTRTGR--HAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYN 218
+ G+WH +L L +G HA L D + GP GGVP
Sbjct: 1692 GRANDGDWHHAQLSLGASGGPGHAILSFDYGQQKAEGNLGPRLHGLHLSNMTVGGVP--- 1748
Query: 219 IVSPKVKIKSSFIGCIQKVLINNHELNILG-EAIQG--VNVV-NCA--HPCITQPCGSGS 272
P + F GC+Q V ++ + + +G +NV C+ PC + PC + S
Sbjct: 1749 --GPASSVARGFRGCLQGVRVSETPEGVSSLDPSRGESINVEPGCSWPDPCDSNPCPTNS 1806
Query: 273 -CVPLYDGYKCVCTQSCKESHLTEV 296
C +D Y C C + T V
Sbjct: 1807 YCSNDWDSYSCSCDPGYYGDNCTNV 1831
Score = 162 (62.1 bits), Expect = 7.2e-11, Sum P(2) = 7.2e-11
Identities = 43/134 (32%), Positives = 66/134 (49%)
Query: 46 KCNKTPCEHGGKCITT-PGSSYCLCPLG-FTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQ 103
+C C++GG C+ G C CP G F CQ + F S++ ++GL ++
Sbjct: 1331 RCTPGVCKNGGTCVNLLVGGFKCDCPSGDFEKPFCQ----VTTRSFPARSFITFRGLRQR 1386
Query: 104 YLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSN 163
+ L L+ K E +G+LLYNG R + DF+AL + V TF G T+
Sbjct: 1387 FHFTLALSFATK--ERDGLLLYNG-RFNEKHDFVALEVIQEQVQLTFSAGESTTTVSPFV 1443
Query: 164 P--ISLGEWHKLRL 175
P +S G+WH ++L
Sbjct: 1444 PGGVSDGQWHTVQL 1457
Score = 84 (34.6 bits), Expect = 7.2e-11, Sum P(2) = 7.2e-11
Identities = 20/77 (25%), Positives = 38/77 (49%)
Query: 212 GGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNCA---HPCITQPC 268
GGVPD P V+++ F+GC++ + +++ +++ V C + C + C
Sbjct: 1526 GGVPDLPESFP-VRMRH-FVGCMKNLQVDSRHVDMADFIANNGTVPGCPTKKNVCDSNTC 1583
Query: 269 -GSGSCVPLYDGYKCVC 284
G+CV +D + C C
Sbjct: 1584 HNGGTCVNQWDAFSCEC 1600
Score = 42 (19.8 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 12/31 (38%), Positives = 13/31 (41%)
Query: 258 NCAHPCITQPCGSGS-CV--PLYD-GYKCVC 284
NC + C PC S C P GY C C
Sbjct: 1827 NCTNVCDLNPCEHQSVCTRKPSAPHGYICEC 1857
Score = 38 (18.4 bits), Expect = 5.5e-11, Sum P(2) = 5.5e-11
Identities = 5/14 (35%), Positives = 10/14 (71%)
Query: 47 CNKTPCEHGGKCIT 60
C + PCE+ +C++
Sbjct: 1232 CLREPCENYMRCVS 1245
>WB|WBGene00007799 [details] [associations]
symbol:nrx-1 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0048786
"presynaptic active zone" evidence=IDA] InterPro:IPR000742
PROSITE:PS50026 SMART:SM00181 GO:GO:0048786 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025 Pfam:PF02210
EMBL:Z73970 WormBase:C29A12.4k Uniprot:I2HAJ6
Length = 1725
Score = 190 (71.9 bits), Expect = 6.1e-11, P = 6.1e-11
Identities = 75/330 (22%), Positives = 139/330 (42%)
Query: 92 SSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFD 151
SSYL LS L+ F+ +G++LY+G D++A L D ++ +
Sbjct: 484 SSYLTLPRWNS--LSSGSLSFHFRTTSSDGLILYHGVMQHNATDYVAFELIDSHLFMIIN 541
Query: 152 LGTGAATLRSSN-PISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXX 210
LG+G L++++ +S GEWH ++L R R + VD +PG
Sbjct: 542 LGSGVVRLQTTSMKVSDGEWHHVQLDRLSRTGSVIVDAI-KIDFSTPGVSANLIIDDPIF 600
Query: 211 XGGVPDYNIVSPK----VKIKSSFIGCIQKVLINNHELNILGE-------AIQ-GVNVVN 258
G VP+ ++V P + ++ + GCI+ + +N I E I+ G ++ N
Sbjct: 601 IGNVPNNSLVYPSSVWSIALQKGYTGCIKNIRMNGVSTKIGQEFEASNSTGIELGCSLSN 660
Query: 259 CAHPCITQPCGS-GSCVPLYDGYKCVCTQSCKESHLTEVMCASFDHGASFLHYLDPEIIH 317
C PC + G C + + C C+ + E E+ + + + +H
Sbjct: 661 ELDICEPNPCQNFGKCSKNLNSFDCDCSNTNFEGKQCELEQTAVEVNG------EESKVH 714
Query: 318 SSGLLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHV 377
L H K ++ E +I +R +T+SS G++ TG++ D + + +++ ++
Sbjct: 715 V--LAHTK--------VSQVE-HIKIRFRTTSSRGVLFDTGANGKNDKITVFLNDSQLNL 763
Query: 378 MYXXXXXXXXXXXXQTKINNGVWHRLTVHR 407
++ +N WH L V R
Sbjct: 764 FLQDSSTNNTFSWGKSLSDNH-WHELQVRR 792
Score = 147 (56.8 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 50/173 (28%), Positives = 85/173 (49%)
Query: 24 DAWIQLNDGNKIKGRSKECLEDKCNKTPCEHGGKCITTPGSSYCLCPL-GFTGDLCQTRL 82
D+ +++N G G C+ED C HG +CI S C C L +GD CQ
Sbjct: 1053 DSRMKVNRG--CSGPIARCIEDAC----ANHG-RCIQLWSSIRCDCSLTAHSGDRCQN-- 1103
Query: 83 DLQVPQFNGS-SYLRYQ-GLGEQYLSLLDLTIV-FKAIEPNGILLYNGHRADGVGDFIAL 139
+F+GS S + Y+ E+ + D + F+ +PNG+L+ AD D+ +
Sbjct: 1104 PSTTVRFDGSPSAIFYEYAPNERPTTSKDYFVFSFRTTQPNGVLISIECAADQ--DYFTI 1161
Query: 140 YLNDRYVDFTFDLGT-GAATLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPS 191
+LN Y++ ++LG T + ++ G H ++++RT + +QVD+ PS
Sbjct: 1162 FLNKGYLNAHYNLGNRDHTTSYHTRILNDGFPHVIKISRTEANMTIQVDKLPS 1214
Score = 146 (56.5 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 46/160 (28%), Positives = 70/160 (43%)
Query: 45 DKCNKTPCEHGGKCITTPGSSYCLCP-LGFTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQ 103
D C PC++ GKC S C C F G C+ L+ + NG + L
Sbjct: 663 DICEPNPCQNFGKCSKNLNSFDCDCSNTNFEGKQCE--LEQTAVEVNGEES-KVHVLAHT 719
Query: 104 YLSLLD-LTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVD-FTFDLGTGAATLRS 161
+S ++ + I F+ G+L G A+G D I ++LND ++ F D T T
Sbjct: 720 KVSQVEHIKIRFRTTSSRGVLFDTG--ANGKNDKITVFLNDSQLNLFLQDSSTNN-TFSW 776
Query: 162 SNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFT 201
+S WH+L++ R G+ L +D F S I P +
Sbjct: 777 GKSLSDNHWHELQVRRLGQKLLLYLDGFWSHSIYLQNPIS 816
>UNIPROTKB|F1LZ10 [details] [associations]
symbol:Lama2 "Protein Lama2" species:10116 "Rattus
norvegicus" [GO:0005604 "basement membrane" evidence=IEA]
[GO:0007155 "cell adhesion" evidence=IEA] InterPro:IPR010307
Pfam:PF06009 RGD:1308889 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
InterPro:IPR001791 Pfam:PF00054 SMART:SM00282 PROSITE:PS50025
GO:GO:0005604 Pfam:PF02210 IPI:IPI00778460
Ensembl:ENSRNOT00000061442 ArrayExpress:F1LZ10 Uniprot:F1LZ10
Length = 1284
Score = 140 (54.3 bits), Expect = 6.2e-11, Sum P(2) = 6.2e-11
Identities = 43/167 (25%), Positives = 78/167 (46%)
Query: 88 QFNGSSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVD 147
QF+G Y Y ++ + F+ N +L+Y R + DF+++ L+D +V
Sbjct: 508 QFDGEGYALVSRPIRWYPNISTVMFKFRTFSSNALLMYLATR--DLKDFMSVELSDGHVK 565
Query: 148 FTFDLGTGAATLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQ-----ILSPGP-F- 200
++DLG+G A++ S+ + G+W L+R + A + + S+Q S G F
Sbjct: 566 VSYDLGSGMASVVSNQNHNDGKWKSFTLSRIQKQANISIVDIDSNQEENIATSSSGNNFG 625
Query: 201 TQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNIL 247
GG+P + P+V +K + GC++ + I+ NIL
Sbjct: 626 LDLKADDKIYFGGLPTLRNLRPEVNVKK-YSGCLKDIEISRTPYNIL 671
Score = 126 (49.4 bits), Expect = 0.00037, P = 0.00037
Identities = 36/141 (25%), Positives = 67/141 (47%)
Query: 120 NGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSNPISLGEWHKLRLTRTG 179
+G+L Y R + DF + L + + F++DLG+G + I+ G+WHK+++TR
Sbjct: 961 SGLLFYMA-RINHA-DFATVQLRNGFPYFSYDLGSGDTSTMIPTRINDGQWHKIKITRVK 1018
Query: 180 RHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSPKV-KIKSSFIGCIQKVL 238
+ L VD S+Q +SP GG+P N + ++ + S GC++ +
Sbjct: 1019 QEGILSVDD-ASNQTISPKKADILDVVGILYVGGLP-INYTTRRIGPVTYSLDGCVRNLY 1076
Query: 239 INNHELNILGEAIQGVNVVNC 259
+ ++ L + +V C
Sbjct: 1077 MEQAPVD-LDQPTSSFHVGTC 1096
Score = 100 (40.3 bits), Expect = 6.2e-11, Sum P(2) = 6.2e-11
Identities = 23/91 (25%), Positives = 42/91 (46%)
Query: 341 IDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGVW 400
I++ ++T + SGL+ + DF + + NG+ + Y T+IN+G W
Sbjct: 951 IELEVRTEAESGLLFYMARINHADFATVQLRNGFPYFSYDLGSGDTSTMI-PTRINDGQW 1009
Query: 401 HRLTVHR----NFMVVMHGSSHTRSNKSSKI 427
H++ + R + V S+ T S K + I
Sbjct: 1010 HKIKITRVKQEGILSVDDASNQTISPKKADI 1040
Score = 82 (33.9 bits), Expect = 0.00016, Sum P(3) = 0.00016
Identities = 32/150 (21%), Positives = 66/150 (44%)
Query: 109 DLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSN-PISL 167
++ + K + +L Y G A + DF+A+ + V F +D+G+G + + I
Sbjct: 335 NIVVHVKTAVADNLLFYLGS-AKFI-DFLAIEMRKGKVSFLWDVGSGVGRVEYPDLTIDD 392
Query: 168 GEWHKLRLTRTGRHAYLQV--------DRFPSSQ-ILSPGPFT--QXXXXXXXXXGGVPD 216
W+++ +RTGR+ + V PS+ +SP +T GG+
Sbjct: 393 SYWYRIEASRTGRNGSISVRALDGPKASMVPSTHHSVSPPGYTILDVDANAMLFVGGLTG 452
Query: 217 YNIVSPKVKIKSSFIGCIQKVLINNHELNI 246
+ V++ ++F GC+ + +N + +
Sbjct: 453 KIKKADAVRV-TTFTGCMGETYFDNKPIGL 481
Score = 80 (33.2 bits), Expect = 0.00016, Sum P(3) = 0.00016
Identities = 24/102 (23%), Positives = 46/102 (45%)
Query: 311 LDPEIIHSSGLLHYKFQLH--VDFRITGYEFNID---MRIKTSSSSGLILWTGSSQSKDF 365
+ P++ S G + + + + V I Y NI + +T SS+ L+++ + KDF
Sbjct: 496 VSPQVEDSEGTIQFDGEGYALVSRPIRWYP-NISTVMFKFRTFSSNALLMYLATRDLKDF 554
Query: 366 LALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGVWHRLTVHR 407
+++ + +G+ V Y Q N+G W T+ R
Sbjct: 555 MSVELSDGHVKVSYDLGSGMASVVSNQNH-NDGKWKSFTLSR 595
Score = 62 (26.9 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 25/91 (27%), Positives = 41/91 (45%)
Query: 436 RLHRTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVEDIEELTR--SKYHHSFKG 493
++ R ++ ++ +D D S Q+IS K + L+ LYVGG+ I TR +S G
Sbjct: 1013 KITRVKQEGILSVD-DASNQTISPKKADILDVVGILYVGGLP-INYTTRRIGPVTYSLDG 1070
Query: 494 WISNLILSN-DYQVKLPLSRSQGSSCQLTCE 523
+ NL + + P S +C E
Sbjct: 1071 CVRNLYMEQAPVDLDQPTSSFHVGTCFANAE 1101
>UNIPROTKB|F1MHH5 [details] [associations]
symbol:CELSR3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007413 "axonal fasciculation" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0004930 "G-protein coupled receptor activity"
evidence=IEA] [GO:0007218 "neuropeptide signaling pathway"
evidence=IEA] [GO:0007156 "homophilic cell adhesion" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] InterPro:IPR000203
InterPro:IPR000742 InterPro:IPR000832 InterPro:IPR001879
InterPro:IPR002126 InterPro:IPR015919 InterPro:IPR017981
InterPro:IPR020894 Pfam:PF00002 Pfam:PF00008 Pfam:PF00028
Pfam:PF01825 Pfam:PF02793 PRINTS:PR00205 PRINTS:PR00249
PROSITE:PS00232 PROSITE:PS50026 PROSITE:PS50221 PROSITE:PS50227
PROSITE:PS50261 PROSITE:PS50268 SMART:SM00008 SMART:SM00112
SMART:SM00181 SMART:SM00303 GO:GO:0016021 GO:GO:0005886
GO:GO:0001764 GO:GO:0004930 GO:GO:0007218 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 GO:GO:0007413 GO:GO:0007156 SUPFAM:SSF49313
InterPro:IPR022624 Pfam:PF12003 Gene3D:2.60.40.60
GeneTree:ENSGT00700000104170 Pfam:PF02210 OMA:DGRRVDM
EMBL:DAAA02054431 IPI:IPI00728856 Ensembl:ENSBTAT00000029126
Uniprot:F1MHH5
Length = 3300
Score = 167 (63.8 bits), Expect = 6.9e-11, Sum P(2) = 6.9e-11
Identities = 42/135 (31%), Positives = 68/135 (50%)
Query: 46 KCNKTPCEHGGKCITTPGSSY-CLCPLG--FTGDLCQTRLDLQVPQFNGSSYLRYQGLGE 102
+C C +GG C P + C CP G F G C+ + F SS++ ++GL +
Sbjct: 1460 RCVPGVCRNGGTCANGPDGGFRCQCPAGGAFEGPRCE----VAARSFPPSSFVMFRGLRQ 1515
Query: 103 QYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSS 162
++ L L++ F ++P+G+L YNG R + DF+AL L V T+ G + +
Sbjct: 1516 RFH--LTLSLSFATVQPSGLLFYNG-RLNEKHDFLALELVAGQVRLTYSTGESNTVVSPT 1572
Query: 163 NP--ISLGEWHKLRL 175
P +S G+WH + L
Sbjct: 1573 VPGGLSDGQWHTVHL 1587
Score = 80 (33.2 bits), Expect = 6.9e-11, Sum P(2) = 6.9e-11
Identities = 22/77 (28%), Positives = 35/77 (45%)
Query: 212 GGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNCA---HPCITQPC 268
GGVP+ P V K F+GC++ + I+ +++ V C H C + PC
Sbjct: 1656 GGVPNLPENFP-VSHKD-FVGCMRDLHIDGRRVDMASFVANNGTVAGCQAKLHFCDSGPC 1713
Query: 269 -GSGSCVPLYDGYKCVC 284
+G C + G+ C C
Sbjct: 1714 KNNGICSERWGGFSCDC 1730
Score = 40 (19.1 bits), Expect = 9.1e-07, Sum P(2) = 9.1e-07
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 266 QPCGSGSCVPLYDGYKCVCT-QSCKESHLTEVMC 298
+P GS SC+P D Y T +SC H + C
Sbjct: 2049 RPRGSDSCLPC-DCYPVGSTSRSCAP-HSGQCPC 2080
>UNIPROTKB|D4ABV7 [details] [associations]
symbol:D4ABV7 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0007269 "neurotransmitter secretion"
evidence=IEA] [GO:0007416 "synapse assembly" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0051965
"positive regulation of synapse assembly" evidence=IEA] [GO:0090129
"positive regulation of synapse maturation" evidence=IEA]
InterPro:IPR000742 InterPro:IPR027158 PROSITE:PS50026 SMART:SM00181
InterPro:IPR000152 GO:GO:0016021 GO:GO:0009986 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0035176
InterPro:IPR001791 SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025
Pfam:PF02210 InterPro:IPR003585 SMART:SM00294 GO:GO:0071625
OrthoDB:EOG41G339 PANTHER:PTHR10127:SF309 IPI:IPI00560475
ProteinModelPortal:D4ABV7 Ensembl:ENSRNOT00000041827
ArrayExpress:D4ABV7 Uniprot:D4ABV7
Length = 1520
Score = 188 (71.2 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 61/207 (29%), Positives = 99/207 (47%)
Query: 92 SSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFD 151
SSY+ L + Y S+ L FK +G++LYN DG DFI + L Y+ + FD
Sbjct: 930 SSYVALATL-QAYTSM-HLFFQFKTTSLDGLILYNS--GDG-NDFIVVELVKGYLHYVFD 984
Query: 152 LGTGAATLR-SSN-PISLGEWHKLRLTRTGRHAY-LQVDRFPSSQILSPGPFTQXXXXXX 208
LG GA ++ SSN P++ +WH + ++R + + +++D ++QI +
Sbjct: 985 LGNGANLIKGSSNKPLNDNQWHNVMISRDTSNLHTVKIDTKITTQITAGA--RNLDLKSD 1042
Query: 209 XXXGGVPDYNIVS-PK-VKIKSSFIGCIQKVLINNHELNILGEAI--QGVNVVNCAHP-- 262
GGV S PK V K F GC+ V +N +++ +A+ G C P
Sbjct: 1043 LYIGGVAKETYKSLPKLVHAKEGFQGCLASVDLNGRLPDLISDALFCNGQIERGCEGPST 1102
Query: 263 -CITQPCGS-GSCVPLYDGYKCVCTQS 287
C C + G C+ +DG+ C C+ +
Sbjct: 1103 TCQEDSCSNQGVCLQQWDGFSCDCSMT 1129
Score = 132 (51.5 bits), Expect = 7.1e-11, Sum P(4) = 7.1e-11
Identities = 61/279 (21%), Positives = 116/279 (41%)
Query: 114 FKAIEPNGILLYN-G---HRADGVG------DFIALYLNDRYVDFTFDLGTGAATLRS-S 162
F+ EPNG++L++ G H+ D DF A+ + D ++ D+G+G +++
Sbjct: 525 FRTTEPNGLILFSHGKPRHQKDAKHPQMIKVDFFAIEMLDGHLYLLLDMGSGTIKIKALQ 584
Query: 163 NPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYN--IV 220
++ GEW+ + R GR + V+ + +PG GG+P+ +V
Sbjct: 585 KKVNDGEWYHVDFQRDGRSGTISVNTL-RTPYTAPGESEILDLDDELYLGGLPENKAGLV 643
Query: 221 SPK----VKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNCAHPCITQPCGSGSCVPL 276
P + ++GCI+ + I+ +I Q + + A + C + P
Sbjct: 644 FPTEVWTALLNYGYVGCIRDLFIDGQSKDIR----QMAEIQSTAG--VKPSCSRETAKPC 697
Query: 277 YDGYKCVCTQSCKESHLTEVM-CASFDH-GASFLHYLDPEIIHSSGLLHYKFQLHVDFRI 334
C C++ V C+ + G S + ++ G + K QL V
Sbjct: 698 LSN-PCKNNGMCRDGWNRYVCDCSGTGYLGRSCER--EATVLSYDGSMFMKIQLPVVMH- 753
Query: 335 TGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNG 373
T E ++ +R ++ + G+++ T S S D L L + G
Sbjct: 754 TEAE-DVSLRFRSQRAYGILMATTSRDSADTLRLELDAG 791
Score = 124 (48.7 bits), Expect = 2.1e-09, Sum P(3) = 2.1e-09
Identities = 53/202 (26%), Positives = 93/202 (46%)
Query: 64 SSYCLCPLGFTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQYLSLLD-LTIVFKAIEPNGI 122
S+ CL L GD Q + + + F GS Y Y S D +T+ FK ++ NG+
Sbjct: 275 STECLAHL-MMGD--QGKEEY-IATFKGSEYFCYDLSQNPIQSSSDEITLSFKTLQRNGL 330
Query: 123 LLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGA--ATLRSSN-PISLGEWHKLRLTRTG 179
+L+ G AD ++ L L + V +LG+GA A + N + WH +++TR
Sbjct: 331 MLHTGKSAD----YVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNAWHDVKVTRNL 386
Query: 180 R-HA---YLQVDRFPSSQ------ILSPGPFTQXXXXXXXXX-----GGVPDYNIVSPKV 224
R H+ + V++ S IL+ +TQ GG P + P
Sbjct: 387 RQHSGIGHAMVNKLHCSVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADL-PGS 445
Query: 225 KIKSSFIGCIQKVLINNHELNI 246
+ ++F+GC+++V+ N+++ +
Sbjct: 446 PVSNNFMGCLKEVVYKNNDVRL 467
Score = 117 (46.2 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 56/226 (24%), Positives = 93/226 (41%)
Query: 25 AWIQLNDGNKIKGRSKECLEDKCNKTPCEHGGKCITTPGSSYCLCP-LGFTGDLCQTRLD 83
A IQ G K S+E + C PC++ G C C C G+ G C+ +
Sbjct: 677 AEIQSTAGVK-PSCSRETAKP-CLSNPCKNNGMCRDGWNRYVCDCSGTGYLGRSCER--E 732
Query: 84 LQVPQFNGSSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLND 143
V ++GS +++ Q + D+++ F++ GIL+ R D D + L L+
Sbjct: 733 ATVLSYDGSMFMKIQLPVVMHTEAEDVSLRFRSQRAYGILMATTSR-DSA-DTLRLELDA 790
Query: 144 RYVDFTFDL---------GTGAATLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQI 194
V T +L G TL + ++ EWH +R+ R G+ L VD +
Sbjct: 791 GRVKLTVNLDCIRINCNSSKGPETLFAGYNLNDNEWHTVRVVRRGKSLKLTVDDQQAMTG 850
Query: 195 LSPGPFTQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLIN 240
G T+ G + + +S + S+FIG +Q + N
Sbjct: 851 QMAGDHTRLEFHNIET-GIITERRYLS---SVPSNFIGHLQSLTFN 892
Score = 99 (39.9 bits), Expect = 9.2e-07, Sum P(3) = 9.2e-07
Identities = 53/234 (22%), Positives = 89/234 (38%)
Query: 53 EHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQYLSLLDLTI 112
+HGG C+ CL L G + L+ P G + R+ S +++
Sbjct: 7 QHGGCCLL------CLSLL-LLGCWAELGSGLEFPGAEGQ-WTRFPKWNACCES--EMSF 56
Query: 113 VFKAIEPNGILLYNGHRADGVGDFIALYLN-DRYVDFTFDLGTGA-ATLRSSNPISLGEW 170
K G++LY +G DF+ L L + +F + ATL + P++ G W
Sbjct: 57 QLKTRSARGLVLYFDD--EGFCDFLELILTRGGRLQLSFSIFCAEPATLLADTPVNDGAW 114
Query: 171 HKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPD------YNIVSPKV 224
H +R+ R R+ L +DR + + GG+P + V
Sbjct: 115 HSVRIRRQFRNTTLYIDRAEAKWVEVKSKRRDMTVFSGLFVGGLPPELRAAALKLTLASV 174
Query: 225 KIKSSFIGCIQKVLINNHE-LNILGEAIQGVNVVNCA--HPCITQPCGSGS-CV 274
+ + F G I+ V +N+ + L + G + N PC G G C+
Sbjct: 175 REREPFKGWIRDVRVNSSQALPVDGSEVLDEEPPNSGGGSPCEAGDEGDGGVCL 228
Score = 84 (34.6 bits), Expect = 7.1e-11, Sum P(4) = 7.1e-11
Identities = 18/66 (27%), Positives = 31/66 (46%)
Query: 344 RIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTK-INNGVWHR 402
+ KT+S GLIL+ S DF+ + + GY H ++ K +N+ WH
Sbjct: 949 QFKTTSLDGLILYN-SGDGNDFIVVELVKGYLHYVFDLGNGANLIKGSSNKPLNDNQWHN 1007
Query: 403 LTVHRN 408
+ + R+
Sbjct: 1008 VMISRD 1013
Score = 80 (33.2 bits), Expect = 9.2e-07, Sum P(3) = 9.2e-07
Identities = 25/86 (29%), Positives = 36/86 (41%)
Query: 341 IDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQT--KINNG 398
I + KT +GL+L TG +S D++ L + NG ++ K N+
Sbjct: 318 ITLSFKTLQRNGLMLHTG--KSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDN 375
Query: 399 VWHRLTVHRNFMVVMH-GSSHTRSNK 423
WH + V RN H G H NK
Sbjct: 376 AWHDVKVTRNLR--QHSGIGHAMVNK 399
Score = 69 (29.3 bits), Expect = 9.2e-07, Sum P(3) = 9.2e-07
Identities = 19/71 (26%), Positives = 32/71 (45%)
Query: 444 CLIRIDTD--YSMQSISGGKFEQLNTDSGLYVGGVEDIEELTRSKYHHSFKGWISNLILS 501
C + I D + + + L +D YVGG +L S ++F G + ++
Sbjct: 402 CSVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGCLKEVVYK 461
Query: 502 NDYQVKLPLSR 512
N+ V+L LSR
Sbjct: 462 NN-DVRLELSR 471
Score = 65 (27.9 bits), Expect = 7.1e-11, Sum P(4) = 7.1e-11
Identities = 25/88 (28%), Positives = 38/88 (43%)
Query: 446 IRIDTDYSMQSISGGKFEQLNTDSGLYVGGVEDIEELTRSKYHHSFKGWISNLILSNDYQ 505
++IDT + Q +G + L+ S LY+GGV + K H+ +G+ + S D
Sbjct: 1020 VKIDTKITTQITAGAR--NLDLKSDLYIGGVAKETYKSLPKLVHAKEGF-QGCLASVDLN 1076
Query: 506 VKLPLSRSQGSSCQLTCETLNTG-QVTC 532
+LP S C E G TC
Sbjct: 1077 GRLPDLISDALFCNGQIERGCEGPSTTC 1104
Score = 58 (25.5 bits), Expect = 8.2e-07, Sum P(3) = 8.2e-07
Identities = 10/45 (22%), Positives = 22/45 (48%)
Query: 364 DFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGVWHRLTVHRN 408
DF A+ + +G+ +++ Q K+N+G W+ + R+
Sbjct: 556 DFFAIEMLDGHLYLLLDMGSGTIKIKALQKKVNDGEWYHVDFQRD 600
Score = 48 (22.0 bits), Expect = 7.1e-11, Sum P(4) = 7.1e-11
Identities = 11/35 (31%), Positives = 14/35 (40%)
Query: 52 CEHGGKCITTPGSSYCLCP-LGFTGDLCQTRLDLQ 85
C +GG C + C C GF G C +Q
Sbjct: 227 CLNGGVCSVVDDQAVCDCSRTGFRGKDCSQGTSVQ 261
Score = 47 (21.6 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 15/51 (29%), Positives = 27/51 (52%)
Query: 428 EFKCLSIQRLHRTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVED 478
E+ + QR R+G + + T Y+ + G+ E L+ D LY+GG+ +
Sbjct: 591 EWYHVDFQRDGRSGTISVNTLRTPYT----APGESEILDLDDELYLGGLPE 637
>UNIPROTKB|E1BJ11 [details] [associations]
symbol:CELSR2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0021591 "ventricular system development" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0004930 "G-protein coupled receptor activity"
evidence=IEA] [GO:0007218 "neuropeptide signaling pathway"
evidence=IEA] [GO:0007156 "homophilic cell adhesion" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] InterPro:IPR000203
InterPro:IPR000742 InterPro:IPR000832 InterPro:IPR001368
InterPro:IPR001879 InterPro:IPR001881 InterPro:IPR002126
InterPro:IPR015919 InterPro:IPR017981 InterPro:IPR020894
Pfam:PF00002 Pfam:PF00008 Pfam:PF00028 Pfam:PF01825 PRINTS:PR00205
PRINTS:PR00249 PROSITE:PS00232 PROSITE:PS50026 PROSITE:PS50221
PROSITE:PS50227 PROSITE:PS50261 PROSITE:PS50268 SMART:SM00008
SMART:SM00112 SMART:SM00179 SMART:SM00181 SMART:SM00208
SMART:SM00303 InterPro:IPR000152 GO:GO:0016021 GO:GO:0005886
GO:GO:0001764 GO:GO:0004930 GO:GO:0007218 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS00010 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 GO:GO:0007156 SUPFAM:SSF49313
InterPro:IPR022624 Pfam:PF12003 Gene3D:2.60.40.60
GeneTree:ENSGT00700000104170 Pfam:PF02210 OMA:YILRAYA
EMBL:DAAA02007576 IPI:IPI00711984 Ensembl:ENSBTAT00000025033
Uniprot:E1BJ11
Length = 2918
Score = 204 (76.9 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 75/265 (28%), Positives = 113/265 (42%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQ-FNGSSYLRYQGLGEQYL 105
C+ C +GG C+ + C CPLGF G C ++ PQ F GSS L + GL
Sbjct: 1573 CDSNSCHNGGTCVNQWDAFSCECPLGFGGKSCAQ--EMANPQRFLGSSLLAWHGLSLPIS 1630
Query: 106 SLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTG--AATLR-SS 162
L+++F+ + +G+LL R I L L + V + + GTG A++L+
Sbjct: 1631 QPWHLSLMFRTRQADGVLLQAVTRGRST---ITLQLREGRVVLSVE-GTGLQASSLQLEP 1686
Query: 163 NPISLGEWH--KLRLTRTGR--HAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYN 218
+ G+WH +L L +G HA L D + GP GGVP
Sbjct: 1687 GRANDGDWHHAQLALGASGGPGHAILSFDYGQQRAEGNLGPRLHGLHLSNVTVGGVP--- 1743
Query: 219 IVSPKVKIKSSFIGCIQKVLINNHELNILG-EAIQG--VNVV-NCA--HPCITQPCGSGS 272
P + F GC+Q V ++ + + +G +NV C+ PC + PC + S
Sbjct: 1744 --GPASGVARGFRGCLQGVRVSETPEGVSSLDPSRGESINVEPGCSLPDPCDSNPCPANS 1801
Query: 273 -CVPLYDGYKCVCTQSCKESHLTEV 296
C +D Y C C + T V
Sbjct: 1802 YCSDDWDSYSCSCDPGYYGDNCTNV 1826
Score = 163 (62.4 bits), Expect = 7.1e-11, Sum P(2) = 7.1e-11
Identities = 43/134 (32%), Positives = 66/134 (49%)
Query: 46 KCNKTPCEHGGKCITT-PGSSYCLCPLG-FTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQ 103
+C C++GG C+ G C CP G F CQ + F S++ ++GL ++
Sbjct: 1326 RCTPGVCKNGGTCVNLLVGGFKCNCPSGDFEKPFCQ----VTTRSFPARSFITFRGLRQR 1381
Query: 104 YLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSN 163
+ L L+ K E +G+LLYNG R + DF+AL + V TF G T+
Sbjct: 1382 FHFTLALSFATK--ERDGLLLYNG-RFNEKHDFVALEVIQEQVQLTFSAGESTTTVSPFV 1438
Query: 164 P--ISLGEWHKLRL 175
P +S G+WH ++L
Sbjct: 1439 PGGVSDGQWHTVQL 1452
Score = 83 (34.3 bits), Expect = 7.1e-11, Sum P(2) = 7.1e-11
Identities = 20/77 (25%), Positives = 37/77 (48%)
Query: 212 GGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNCA---HPCITQPC 268
GGVPD P V+ + F+GCI+ + +++ +++ + C + C + C
Sbjct: 1521 GGVPDLPESFP-VRTRQ-FVGCIRNLQVDSRHVDMADFIANNGTMPGCPAKKNVCDSNSC 1578
Query: 269 -GSGSCVPLYDGYKCVC 284
G+CV +D + C C
Sbjct: 1579 HNGGTCVNQWDAFSCEC 1595
Score = 46 (21.3 bits), Expect = 4.6e-07, Sum P(2) = 4.6e-07
Identities = 13/34 (38%), Positives = 14/34 (41%)
Query: 258 NCAHPCITQPCGSGS-CV--PLYD-GYKCVCTQS 287
NC + C PC S C P GY C C S
Sbjct: 1822 NCTNVCDLNPCEHQSMCTRKPSAPHGYTCECPPS 1855
Score = 38 (18.4 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 5/14 (35%), Positives = 10/14 (71%)
Query: 47 CNKTPCEHGGKCIT 60
C + PCE+ +C++
Sbjct: 1227 CLREPCENYMRCVS 1240
>UNIPROTKB|F1PCL3 [details] [associations]
symbol:F1PCL3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR000742 PROSITE:PS50026 SMART:SM00181 GO:GO:0016021
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025
Pfam:PF02210 InterPro:IPR003585 SMART:SM00294
GeneTree:ENSGT00560000076804 EMBL:AAEX03010167 EMBL:AAEX03010163
EMBL:AAEX03010164 EMBL:AAEX03010165 EMBL:AAEX03010166
Ensembl:ENSCAFT00000005601 OMA:RHERTVI Uniprot:F1PCL3
Length = 649
Score = 184 (69.8 bits), Expect = 7.3e-11, P = 7.3e-11
Identities = 65/227 (28%), Positives = 98/227 (43%)
Query: 90 NGSSYLRYQGL-GEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRY-VD 147
N SSYL + GE + D++ FK + P G+ L N G DFI L L V
Sbjct: 122 NPSSYLHFSTFQGE---TSADISFYFKTLIPRGVFLENL----GNTDFIKLELKSATEVS 174
Query: 148 FTFDLGTGAATL--RSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGP-FTQXX 204
F+FD+G G + RS +P++ +WH++ R + A LQVDR P +P T+
Sbjct: 175 FSFDVGNGPVEIVVRSPSPLNDDQWHRVTAERNVKQASLQVDRLPQQIRKAPTEGHTRLE 234
Query: 205 XXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEA-IQGVNVVNCAHPC 263
GG + F+GCI+ + +N L++ A + C+ C
Sbjct: 235 LYSQLFVGGAGG----------QQGFLGCIRSLRMNGVTLDLEERAKVTSGFKSGCSGHC 284
Query: 264 ITQP--CGSGS-CVPLYDGYKCVCTQSCKESHLTEVMCASFDHGASF 307
+ C +G C+ Y GY C C+ + + C D GA F
Sbjct: 285 TSYGANCENGGRCLEKYHGYSCDCSHTAYDG----TFCNKADVGAFF 327
>UNIPROTKB|F1LM26 [details] [associations]
symbol:LOC304725 "Protein LOC304725" species:10116 "Rattus
norvegicus" [GO:0007155 "cell adhesion" evidence=IEA]
InterPro:IPR000421 InterPro:IPR000742 Pfam:PF00754 PROSITE:PS01285
PROSITE:PS01286 PROSITE:PS50022 PROSITE:PS50026 SMART:SM00181
SMART:SM00231 RGD:1592077 INTERPRO:IPR002181 GO:GO:0007165
GO:GO:0007155 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 InterPro:IPR008979
SUPFAM:SSF49785 InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025
SUPFAM:SSF56496 PROSITE:PS51406 Pfam:PF02210 IPI:IPI00564888
Ensembl:ENSRNOT00000047976 ArrayExpress:F1LM26 Uniprot:F1LM26
Length = 1292
Score = 154 (59.3 bits), Expect = 7.5e-11, Sum P(3) = 7.5e-11
Identities = 77/331 (23%), Positives = 137/331 (41%)
Query: 92 SSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLND-RYVDFTF 150
+SYL + ++ + D++ FK +GI L N G+ F+ L ++ V F
Sbjct: 786 ASYLHFSAFHVEFSA--DISFFFKTTALSGIFLENL----GIKGFLRLEMSSPSEVIFAI 839
Query: 151 DLGTGAATL--RSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSS--QILSPGPFTQXXXX 206
D+G L +S P++ +WH ++ R + LQVD P + ++ F
Sbjct: 840 DVGNSPIELLVQSPYPLNDNQWHYIQAERNIKETLLQVDNLPKNKREVSDQSNFL-LQLS 898
Query: 207 XXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEA--IQGVNVVNCAHPCI 264
GG S + K F+GCI+ + +N ++++ A GV C C
Sbjct: 899 SQLFIGGT------SSRQK---GFLGCIRSLHLNGQKIDLEERAKITPGVRP-GCPGHCS 948
Query: 265 T--QPC-GSGSCVPLYDGYKCVCTQSCKESHLTEV-MCASFDHGASFLH-YLDPEIIHSS 319
+ + C G CV ++GY C CT S E + M A F G S + + +P + +
Sbjct: 949 SYGRNCHNGGKCVEKHNGYSCDCTNSPFEGPFCQKEMSALFYSGTSVTYMFQEPYPVAKN 1008
Query: 320 GLLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGI-HNGYAHVM 378
L ++ D E + + T+ + L+L+ S + FLA+ + NG +
Sbjct: 1009 TSLSSS-AIYKD-TAPSKEI-VTLSFITAQAPALLLYLKFSP-QSFLAILLSRNGNLQIH 1064
Query: 379 YXXXXXXXXXXXXQTK-INNGVWHRLTVHRN 408
Y ++ + N H + ++RN
Sbjct: 1065 YQLSKVESHVFTVGSENLANRRVHEVNMNRN 1095
Score = 128 (50.1 bits), Expect = 3.6e-05, Sum P(3) = 3.6e-05
Identities = 57/209 (27%), Positives = 92/209 (44%)
Query: 78 CQTRLDLQVPQFNGSSYLRYQGLGEQYLSLLD-LTIVFKAIEPNGILLYN-GHRADGVGD 135
C + D V F+G S L Y+ + +L D +++ FK+++ +G+L + G R GD
Sbjct: 174 CSYKSD--VADFDGQSSLLYRFSQKTMSTLKDVISLKFKSMQGDGVLFHGEGQR----GD 227
Query: 136 FIALYL-NDRYVDFTFDLGTGAATLRSSNPIS-LGE------WHKLRLTRTGRHAYLQVD 187
I L L N R V + +L A L S P + LG WH + L R G+ VD
Sbjct: 228 HITLELQNGRLVLY-LNLDDKKAWLSSITPSAILGSLLDDQHWHSVFLERVGKQVNFTVD 286
Query: 188 RFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNIL 247
R + + G GG+P + P +K +F GCI+ + N +NI+
Sbjct: 287 R-NTQHFWTKGETEVLDIDYELSFGGIPVPS--KPGTFVKKNFHGCIENLYYNG--VNII 341
Query: 248 GEAIQGVNVVNCAHPCITQPCGSGSCVPL 276
A + + + + +T C VP+
Sbjct: 342 DLAKRRKHQIYSGN--VTFSCSEPQIVPI 368
Score = 92 (37.4 bits), Expect = 7.5e-11, Sum P(3) = 7.5e-11
Identities = 17/41 (41%), Positives = 22/41 (53%)
Query: 43 LEDKCNKTPCEHGGKCITTPGSSYCLCP-LGFTGDLCQTRL 82
++D+C CEHGG C T S YC C G+TG C +
Sbjct: 546 IKDRCLPNYCEHGGHCTQTWTSFYCNCSDTGYTGATCHNSI 586
Score = 63 (27.2 bits), Expect = 3.6e-05, Sum P(3) = 3.6e-05
Identities = 13/67 (19%), Positives = 30/67 (44%)
Query: 340 NIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGV 399
++ + +T + GL+L T S+ L L + +G ++ +N+G
Sbjct: 390 SVSFQFRTWNEDGLLLSTELSEGSGTLLLILESGTLRLLIKKVTGHGTESLTGRSLNDGR 449
Query: 400 WHRLTVH 406
WH ++++
Sbjct: 450 WHSVSIN 456
Score = 37 (18.1 bits), Expect = 7.5e-11, Sum P(3) = 7.5e-11
Identities = 5/11 (45%), Positives = 10/11 (90%)
Query: 26 WIQLNDGNKIK 36
W+QL+ GN+++
Sbjct: 77 WLQLDLGNRVE 87
>UNIPROTKB|Q0V8T5 [details] [associations]
symbol:Cntnap5b "Contactin-associated protein like 5-2"
species:10116 "Rattus norvegicus" [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR000421 InterPro:IPR000742 Pfam:PF00754 PROSITE:PS01285
PROSITE:PS01286 PROSITE:PS50022 PROSITE:PS50026 SMART:SM00181
SMART:SM00231 RGD:1565194 INTERPRO:IPR002181 GO:GO:0016021
GO:GO:0007165 GO:GO:0007155 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 InterPro:IPR008979 SUPFAM:SSF49785
InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025 SUPFAM:SSF56496
PROSITE:PS00514 PROSITE:PS51406 Pfam:PF02210 HOVERGEN:HBG057718
eggNOG:NOG291100 HOGENOM:HOG000230964 OrthoDB:EOG4RFKVD
EMBL:AABR03084824 EMBL:AABR03084984 EMBL:AABR03085000
EMBL:AABR03085128 EMBL:AABR03085301 EMBL:AABR03085395
EMBL:AABR03085665 EMBL:AABR03085695 EMBL:AABR03085869
EMBL:AABR03085874 EMBL:AABR03086267 EMBL:AABR03086376
EMBL:AABR03087382 EMBL:AABR03086635 EMBL:AABR03088686 EMBL:BN000869
IPI:IPI00564888 RefSeq:XP_002724886.1 RefSeq:XP_002728032.1
UniGene:Rn.199861 UniGene:Rn.202933 ProteinModelPortal:Q0V8T5
PRIDE:Q0V8T5 GeneID:304725 KEGG:rno:304725 NextBio:653521
ArrayExpress:Q0V8T5 Genevestigator:Q0V8T5 Uniprot:Q0V8T5
Length = 1292
Score = 154 (59.3 bits), Expect = 7.5e-11, Sum P(3) = 7.5e-11
Identities = 77/331 (23%), Positives = 137/331 (41%)
Query: 92 SSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLND-RYVDFTF 150
+SYL + ++ + D++ FK +GI L N G+ F+ L ++ V F
Sbjct: 786 ASYLHFSAFHVEFSA--DISFFFKTTALSGIFLENL----GIKGFLRLEMSSPSEVIFAI 839
Query: 151 DLGTGAATL--RSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSS--QILSPGPFTQXXXX 206
D+G L +S P++ +WH ++ R + LQVD P + ++ F
Sbjct: 840 DVGNSPIELLVQSPYPLNDNQWHYIQAERNIKETLLQVDNLPKNKREVSDQSNFL-LQLS 898
Query: 207 XXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEA--IQGVNVVNCAHPCI 264
GG S + K F+GCI+ + +N ++++ A GV C C
Sbjct: 899 SQLFIGGT------SSRQK---GFLGCIRSLHLNGQKIDLEERAKITPGVRP-GCPGHCS 948
Query: 265 T--QPC-GSGSCVPLYDGYKCVCTQSCKESHLTEV-MCASFDHGASFLH-YLDPEIIHSS 319
+ + C G CV ++GY C CT S E + M A F G S + + +P + +
Sbjct: 949 SYGRNCHNGGKCVEKHNGYSCDCTNSPFEGPFCQKEMSALFYSGTSVTYMFQEPYPVAKN 1008
Query: 320 GLLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGI-HNGYAHVM 378
L ++ D E + + T+ + L+L+ S + FLA+ + NG +
Sbjct: 1009 TSLSSS-AIYKD-TAPSKEI-VTLSFITAQAPALLLYLKFSP-QSFLAILLSRNGSLQIH 1064
Query: 379 YXXXXXXXXXXXXQTK-INNGVWHRLTVHRN 408
Y ++ + N H + ++RN
Sbjct: 1065 YQLSKVESHVFTVGSENLANRRVHEVNMNRN 1095
Score = 128 (50.1 bits), Expect = 3.6e-05, Sum P(3) = 3.6e-05
Identities = 57/209 (27%), Positives = 92/209 (44%)
Query: 78 CQTRLDLQVPQFNGSSYLRYQGLGEQYLSLLD-LTIVFKAIEPNGILLYN-GHRADGVGD 135
C + D V F+G S L Y+ + +L D +++ FK+++ +G+L + G R GD
Sbjct: 174 CSYKSD--VADFDGQSSLLYRFSQKTMSTLKDVISLKFKSMQGDGVLFHGEGQR----GD 227
Query: 136 FIALYL-NDRYVDFTFDLGTGAATLRSSNPIS-LGE------WHKLRLTRTGRHAYLQVD 187
I L L N R V + +L A L S P + LG WH + L R G+ VD
Sbjct: 228 HITLELQNGRLVLY-LNLDDKKAWLSSITPSAILGSLLDDQHWHSVFLERVGKQVNFTVD 286
Query: 188 RFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNIL 247
R + + G GG+P + P +K +F GCI+ + N +NI+
Sbjct: 287 R-NTQHFWTKGETEVLDIDYELSFGGIPVPS--KPGTFVKKNFHGCIENLYYNG--VNII 341
Query: 248 GEAIQGVNVVNCAHPCITQPCGSGSCVPL 276
A + + + + +T C VP+
Sbjct: 342 DLAKRRKHQIYSGN--VTFSCSEPQIVPI 368
Score = 92 (37.4 bits), Expect = 7.5e-11, Sum P(3) = 7.5e-11
Identities = 17/41 (41%), Positives = 22/41 (53%)
Query: 43 LEDKCNKTPCEHGGKCITTPGSSYCLCP-LGFTGDLCQTRL 82
++D+C CEHGG C T S YC C G+TG C +
Sbjct: 546 IKDRCLPNYCEHGGHCTQTWTSFYCNCSDTGYTGATCHNSI 586
Score = 63 (27.2 bits), Expect = 3.6e-05, Sum P(3) = 3.6e-05
Identities = 13/67 (19%), Positives = 30/67 (44%)
Query: 340 NIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGV 399
++ + +T + GL+L T S+ L L + +G ++ +N+G
Sbjct: 390 SVSFQFRTWNEDGLLLSTELSEGSGTLLLILESGTLRLLIKKVTGHGTESLTGRSLNDGR 449
Query: 400 WHRLTVH 406
WH ++++
Sbjct: 450 WHSVSIN 456
Score = 37 (18.1 bits), Expect = 7.5e-11, Sum P(3) = 7.5e-11
Identities = 5/11 (45%), Positives = 10/11 (90%)
Query: 26 WIQLNDGNKIK 36
W+QL+ GN+++
Sbjct: 77 WLQLDLGNRVE 87
>WB|WBGene00004854 [details] [associations]
symbol:slt-1 species:6239 "Caenorhabditis elegans"
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=ISS] [GO:0005102 "receptor binding"
evidence=ISS;IPI] [GO:0033563 "dorsal/ventral axon guidance"
evidence=IGI;IMP] [GO:0001764 "neuron migration" evidence=IMP]
[GO:0048843 "negative regulation of axon extension involved in axon
guidance" evidence=IGI] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0001764
GO:GO:0005576 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005102 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186
InterPro:IPR001791 SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 InterPro:IPR006207
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 HSSP:P00740
GO:GO:0033563 GeneTree:ENSGT00700000104083 EMBL:Z69792
GO:GO:0048843 EMBL:AL022270 PIR:D89711 PIR:T22025
RefSeq:NP_510437.2 ProteinModelPortal:G5EFX6 SMR:G5EFX6
EnsemblMetazoa:F40E10.4 GeneID:181562 KEGG:cel:CELE_F40E10.4
CTD:181562 WormBase:F40E10.4 OMA:KSISHIA NextBio:914450
Uniprot:G5EFX6
Length = 1410
Score = 188 (71.2 bits), Expect = 7.9e-11, P = 7.9e-11
Identities = 71/267 (26%), Positives = 110/267 (41%)
Query: 45 DKCNKTPCEHGGKCITTPGSS--YCLCPLGFTGDLCQTRLDLQVPQFNGSSYLRYQGLGE 102
D C ++ C G +C+ + SS C C GF+G C ++ + N +YL L
Sbjct: 1074 DACQQSACGQG-ECVASQNSSDFTCKCHEGFSGPSCDRQMSVGFK--NPGAYLALDPLAS 1130
Query: 103 QYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAAT-LRS 161
+T+ + GILLY G F++ L D V + +G A+ + S
Sbjct: 1131 DGT----ITMTLRTTSKIGILLYYGD-----DHFVSAELYDGRVKLVYYIGNFPASHMYS 1181
Query: 162 SNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXX--GGVPDYNI 219
S ++ G H++ + + R +LQ+D+ P + + G Q GG+P
Sbjct: 1182 SVKVNDGLPHRISIRTSERKCFLQIDKNPVQIVENSGKSDQLITKGKEMLYIGGLPIEKS 1241
Query: 220 VSPK----VKIKSSFIGCIQKVLINNHELNILGEAIQGVNVV-NCAHP---CITQPCGSG 271
K VK S GCI + IN +N L +A++ VN +C+ C CG+G
Sbjct: 1242 QDAKRRFHVKNSESLKGCISSITINEVPIN-LQQALENVNTEQSCSATVNFCAGIDCGNG 1300
Query: 272 SCV--PLYD-GYKCVCTQSCKESHLTE 295
C L GY C C H E
Sbjct: 1301 KCTNNALSPKGYMCQCDSHFSGEHCDE 1327
Score = 120 (47.3 bits), Expect = 2.7e-09, Sum P(3) = 2.7e-09
Identities = 25/49 (51%), Positives = 30/49 (61%)
Query: 40 KECLEDK---CNK--TPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLD 83
K C EDK C K PCE+ GKCI GS C+C GFTG+ C+T +D
Sbjct: 980 KHC-EDKLEYCTKKLNPCENNGKCIPINGSYSCMCSPGFTGNNCETNID 1027
Score = 95 (38.5 bits), Expect = 1.2e-06, Sum P(3) = 1.2e-06
Identities = 16/46 (34%), Positives = 25/46 (54%)
Query: 45 DKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQFN 90
D C + CE+GGKC+ S C CP+ + G C+ +L+ + N
Sbjct: 949 DDCVNSKCENGGKCVDLINSYRCDCPMEYEGKHCEDKLEYCTKKLN 994
Score = 79 (32.9 bits), Expect = 2.7e-09, Sum P(3) = 2.7e-09
Identities = 33/167 (19%), Positives = 73/167 (43%)
Query: 248 GEAIQGVNVVNCAHPCITQPCGSGS-C-VPLYDGYKCVCTQSCKESHLTEVMCASFDHGA 305
G + G+ ++ C+ +P +G C +P + T +C++S + C + + +
Sbjct: 1038 GSCVDGI----LSYDCLCRPGYAGQYCEIPPMMDMEYQKTDACQQSACGQGECVASQNSS 1093
Query: 306 SFL---H--YLDPEIIH--SSGLLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTG 358
F H + P S G + L +D + + I M ++T+S G++L+ G
Sbjct: 1094 DFTCKCHEGFSGPSCDRQMSVGFKNPGAYLALDPLAS--DGTITMTLRTTSKIGILLYYG 1151
Query: 359 SSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGVWHRLTV 405
F++ +++G ++Y K+N+G+ HR+++
Sbjct: 1152 DDH---FVSAELYDGRVKLVYYIGNFPASHMYSSVKVNDGLPHRISI 1195
Score = 79 (32.9 bits), Expect = 5.7e-05, Sum P(3) = 5.7e-05
Identities = 14/40 (35%), Positives = 19/40 (47%)
Query: 45 DKCNKTPCEHGGKC-ITTPGSSYCLCPLGFTGDLCQTRLD 83
D C +PC + C + G C C GF GD C+ +D
Sbjct: 910 DACYGSPCLNNATCKVAQAGRFNCYCNKGFEGDYCEKNID 949
Score = 79 (32.9 bits), Expect = 5.7e-05, Sum P(3) = 5.7e-05
Identities = 15/40 (37%), Positives = 21/40 (52%)
Query: 45 DKCNKTPCEHGGKCITTPGSSY-CLCPLGFTGDLCQTRLD 83
D C +PC++ C TT Y C C GF G C+ ++D
Sbjct: 871 DLCLNSPCKNNAICETTSSRKYTCNCTPGFYGVHCENQID 910
Score = 72 (30.4 bits), Expect = 2.7e-09, Sum P(3) = 2.7e-09
Identities = 31/110 (28%), Positives = 55/110 (50%)
Query: 439 RTG-KQCLIRIDTDYSMQSI-SGGKFEQLNTDSG--LYVGG--VEDIEELTRSKYH---- 488
RT ++C ++ID + +Q + + GK +QL T LY+GG +E ++ R ++H
Sbjct: 1196 RTSERKCFLQIDKN-PVQIVENSGKSDQLITKGKEMLYIGGLPIEKSQDAKR-RFHVKNS 1253
Query: 489 HSFKGWISNLILSNDYQVKLPLSRSQGS---SCQLT---CETLNTGQVTC 532
S KG IS++ + N+ + L + + SC T C ++ G C
Sbjct: 1254 ESLKGCISSITI-NEVPINLQQALENVNTEQSCSATVNFCAGIDCGNGKC 1302
>MGI|MGI:3664583 [details] [associations]
symbol:Cntnap5b "contactin associated protein-like 5B"
species:10090 "Mus musculus" [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR000421
InterPro:IPR000742 Pfam:PF00754 PROSITE:PS01285 PROSITE:PS01286
PROSITE:PS50022 PROSITE:PS50026 SMART:SM00181 SMART:SM00231
MGI:MGI:3664583 INTERPRO:IPR002181 GO:GO:0016021 GO:GO:0007165
GO:GO:0007155 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 InterPro:IPR008979 SUPFAM:SSF49785
InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025 SUPFAM:SSF56496
PROSITE:PS00514 PROSITE:PS51406 Pfam:PF02210 HOVERGEN:HBG057718
eggNOG:NOG291100 HOGENOM:HOG000230964 GeneTree:ENSGT00560000076804
EMBL:AC102217 EMBL:AC135080 EMBL:AC157363 EMBL:AC158402
EMBL:AC161355 EMBL:AC163496 EMBL:AK082656 EMBL:AM076974
EMBL:BN000866 IPI:IPI00225637 IPI:IPI00886071 RefSeq:NP_766439.2
UniGene:Mm.251301 ProteinModelPortal:Q0V8T8 SMR:Q0V8T8 PaxDb:Q0V8T8
PRIDE:Q0V8T8 DNASU:241175 Ensembl:ENSMUST00000086738 GeneID:241175
KEGG:mmu:241175 UCSC:uc007cfy.1 UCSC:uc007cfz.1 CTD:241175
InParanoid:Q0V8T8 OMA:NTENFAN OrthoDB:EOG4RFKVD NextBio:384915
Bgee:Q0V8T8 CleanEx:MM_CNTNAP5B Genevestigator:Q0V8T8
Uniprot:Q0V8T8
Length = 1292
Score = 157 (60.3 bits), Expect = 9.0e-11, Sum P(3) = 9.0e-11
Identities = 77/314 (24%), Positives = 134/314 (42%)
Query: 109 DLTIVFKAIEPNGILLYNGHRADGVGDFIALYLND-RYVDFTFDLGTGAATL--RSSNPI 165
D++ FK +G+ L N GV +F+ L ++ V F D+G G L +S P+
Sbjct: 801 DISFFFKTTALSGVFLENL----GVKNFLRLEMSSPSEVIFAIDVGNGPMELLVQSPYPL 856
Query: 166 SLGEWHKLRLTRTGRHAYLQVDRFPSSQILSP--GPFTQXXXXXXXXXGGVPDYNIVSPK 223
+ +WH ++ R + L VD P S ++ G F GG S +
Sbjct: 857 NDNQWHYIQAERNIKETLLHVDNLPKSMRMASEEGHFL-LQLNSQLFVGGT------SSR 909
Query: 224 VKIKSSFIGCIQKVLINNHELNILGEA--IQGVNVVNCAHPCIT--QPC-GSGSCVPLYD 278
K F+GCI+ + +N ++++ A GV CA C + + C G CV +
Sbjct: 910 QK---GFLGCIRSLHLNGQKVDLEERAKITSGVRP-GCAGHCNSYGRNCQNGGKCVEKHI 965
Query: 279 GYKCVCTQSCKESHLTEV-MCASFDHGASFLH-YLDPEIIHSSGLLHYKFQLHVDFRITG 336
GY C CT S E + + A F G S + + +P + + L ++ D +
Sbjct: 966 GYTCDCTNSPYEGPFCKKEISALFYSGTSVTYMFQEPYPVTKNTSLSSS-AIYKDTAPS- 1023
Query: 337 YEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGI-HNGYAHVMYXXXXXXXXXXXXQTK- 394
+ I + T+ + L+L+ S S++FLA+ + NG + Y T+
Sbjct: 1024 -KEAITLSFMTAQAPTLLLYLNFS-SQNFLAILLSRNGSLQIQYRLSKEESHVFTISTEN 1081
Query: 395 INNGVWHRLTVHRN 408
+ N H++ + R+
Sbjct: 1082 LANRRVHQVKMSRD 1095
Score = 131 (51.2 bits), Expect = 6.9e-06, Sum P(3) = 6.9e-06
Identities = 53/200 (26%), Positives = 88/200 (44%)
Query: 86 VPQFNGSSYLRYQGLGEQYLSLLD-LTIVFKAIEPNGILLYN-GHRADGVGDFIALYLND 143
V F+G S L Y+ + +L D +++ FK+++ +G+L + G R GD I L L +
Sbjct: 180 VADFDGRSSLLYRFNQKTMSTLKDVISLKFKSMQGDGVLFHGEGQR----GDHITLELQN 235
Query: 144 RYVDFTFDLGTGAATLRSSNPIS-LGE------WHKLRLTRTGRHAYLQVDRFPSSQILS 196
+ +L A L S P + LG WH + L R G+ A VDR + +
Sbjct: 236 GRLALYLNLDDSKARLSSITPSAILGSLLDDQHWHSVLLERVGKQANFTVDR-NTQHFRT 294
Query: 197 PGPFTQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNV 256
G GG+P + P +K +F GCI+ + N +NI+ A + +
Sbjct: 295 NGDTDALDIDYELSFGGIPVPS--KPGTFLKKNFQGCIENLYYNG--VNIIDLAKRRKHQ 350
Query: 257 VNCAHPCITQPCGSGSCVPL 276
+ + +T C VP+
Sbjct: 351 IYSGN--VTFSCSEPQIVPI 368
Score = 88 (36.0 bits), Expect = 9.0e-11, Sum P(3) = 9.0e-11
Identities = 16/37 (43%), Positives = 21/37 (56%)
Query: 43 LEDKCNKTPCEHGGKCITTPGSSYCLCP-LGFTGDLC 78
++D+C CEHGG C T + YC C G+TG C
Sbjct: 546 IKDRCFPNYCEHGGHCTQTWTNFYCNCSNTGYTGATC 582
Score = 67 (28.6 bits), Expect = 6.9e-06, Sum P(3) = 6.9e-06
Identities = 14/67 (20%), Positives = 28/67 (41%)
Query: 340 NIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGV 399
++ + +T + GL+L T S+ L L + G ++ +NNG
Sbjct: 390 SVSFQFRTWNEDGLLLSTELSEGSGTLLLILEGGTLRLLIKNVAGHGTESLTGRSLNNGQ 449
Query: 400 WHRLTVH 406
WH + ++
Sbjct: 450 WHSVNIN 456
Score = 37 (18.1 bits), Expect = 9.0e-11, Sum P(3) = 9.0e-11
Identities = 5/11 (45%), Positives = 10/11 (90%)
Query: 26 WIQLNDGNKIK 36
W+QL+ GN+++
Sbjct: 77 WLQLDLGNRVE 87
>MGI|MGI:1315205 [details] [associations]
symbol:Slit2 "slit homolog 2 (Drosophila)" species:10090
"Mus musculus" [GO:0001656 "metanephros development" evidence=IMP]
[GO:0001657 "ureteric bud development" evidence=ISO] [GO:0001701
"in utero embryonic development" evidence=IMP] [GO:0001933
"negative regulation of protein phosphorylation" evidence=ISO]
[GO:0002042 "cell migration involved in sprouting angiogenesis"
evidence=ISO] [GO:0002689 "negative regulation of leukocyte
chemotaxis" evidence=ISO] [GO:0005095 "GTPase inhibitor activity"
evidence=ISO] [GO:0005102 "receptor binding" evidence=TAS]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005615 "extracellular
space" evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=ISO] [GO:0006935
"chemotaxis" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IMP;IDA]
[GO:0007411 "axon guidance" evidence=ISO;IGI;IMP;IDA] [GO:0008045
"motor neuron axon guidance" evidence=ISO] [GO:0008201 "heparin
binding" evidence=ISO] [GO:0008285 "negative regulation of cell
proliferation" evidence=IGI] [GO:0009986 "cell surface"
evidence=ISO] [GO:0010593 "negative regulation of lamellipodium
assembly" evidence=ISO] [GO:0010596 "negative regulation of
endothelial cell migration" evidence=ISO] [GO:0010629 "negative
regulation of gene expression" evidence=IGI] [GO:0014912 "negative
regulation of smooth muscle cell migration" evidence=ISO]
[GO:0016337 "cell-cell adhesion" evidence=IGI;IMP] [GO:0021772
"olfactory bulb development" evidence=IGI] [GO:0021836
"chemorepulsion involved in postnatal olfactory bulb interneuron
migration" evidence=ISO] [GO:0021972 "corticospinal neuron axon
guidance through spinal cord" evidence=ISO] [GO:0022029
"telencephalon cell migration" evidence=IGI] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=ISO] [GO:0030336 "negative regulation of cell
migration" evidence=ISO] [GO:0030837 "negative regulation of actin
filament polymerization" evidence=ISO] [GO:0031290 "retinal
ganglion cell axon guidance" evidence=ISO;IGI;IMP] [GO:0033563
"dorsal/ventral axon guidance" evidence=IGI;IMP] [GO:0035385
"Roundabout signaling pathway" evidence=ISO] [GO:0042803 "protein
homodimerization activity" evidence=ISO] [GO:0043065 "positive
regulation of apoptotic process" evidence=ISO] [GO:0043086
"negative regulation of catalytic activity" evidence=ISO]
[GO:0043116 "negative regulation of vascular permeability"
evidence=ISO] [GO:0043237 "laminin-1 binding" evidence=ISO]
[GO:0043394 "proteoglycan binding" evidence=ISO] [GO:0043395
"heparan sulfate proteoglycan binding" evidence=ISO] [GO:0045499
"chemorepellent activity" evidence=IMP] [GO:0048495 "Roundabout
binding" evidence=ISO] [GO:0048754 "branching morphogenesis of an
epithelial tube" evidence=ISO] [GO:0048812 "neuron projection
morphogenesis" evidence=IGI;IMP] [GO:0048846 "axon extension
involved in axon guidance" evidence=ISO] [GO:0050728 "negative
regulation of inflammatory response" evidence=ISO] [GO:0050919
"negative chemotaxis" evidence=ISO;IMP] [GO:0050929 "induction of
negative chemotaxis" evidence=ISO] [GO:0051058 "negative regulation
of small GTPase mediated signal transduction" evidence=ISO]
[GO:0060603 "mammary gland duct morphogenesis" evidence=IGI;IMP]
[GO:0060763 "mammary duct terminal end bud growth" evidence=IMP]
[GO:0070100 "negative regulation of chemokine-mediated signaling
pathway" evidence=ISO] [GO:0071504 "cellular response to heparin"
evidence=ISO] [GO:0071672 "negative regulation of smooth muscle
cell chemotaxis" evidence=ISO] [GO:0071676 "negative regulation of
mononuclear cell migration" evidence=ISO] [GO:0090024 "negative
regulation of neutrophil chemotaxis" evidence=ISO] [GO:0090027
"negative regulation of monocyte chemotaxis" evidence=ISO]
[GO:0090260 "negative regulation of retinal ganglion cell axon
guidance" evidence=ISO] [GO:0090288 "negative regulation of
cellular response to growth factor stimulus" evidence=ISO]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 MGI:MGI:1315205 GO:GO:0005737 GO:GO:0008285
GO:GO:0005615 GO:GO:0009986 GO:GO:0030308 GO:GO:0001701
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005102 GO:GO:0008201 GO:GO:0005509
GO:GO:0043116 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0043065 GO:GO:0008045 GO:GO:0071504
GO:GO:0005095 GO:GO:0016337 PROSITE:PS01186 GO:GO:0032870
GO:GO:0030837 GO:GO:0010629 InterPro:IPR003645 InterPro:IPR001791
Pfam:PF00054 SMART:SM00274 SMART:SM00282 PROSITE:PS50025
GO:GO:0071672 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0001656 GO:GO:0010596 GO:GO:0001657 GO:GO:0001933
GO:GO:0048754 GO:GO:0071676 GO:GO:0031290 InterPro:IPR006207
PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041 GO:GO:0048846
GO:GO:0021772 GO:GO:0060763 GO:GO:0070100 GO:GO:0090288
GO:GO:0022029 GO:GO:0033563 GO:GO:0045499 GO:GO:0002042
Pfam:PF01463 GO:GO:0010593 GO:GO:0051414
GeneTree:ENSGT00700000104083 GO:GO:0090260 GO:GO:0021836
GO:GO:0061364 HOVERGEN:HBG057959 CTD:9353 KO:K06839 GO:GO:0021972
GO:GO:0050929 GO:GO:0090024 GO:GO:0051058 EMBL:AF144628
EMBL:AC101004 EMBL:AC113542 EMBL:AC157351 EMBL:AF074960
EMBL:BC059267 IPI:IPI00128415 PIR:T42626 RefSeq:NP_848919.3
UniGene:Mm.289739 ProteinModelPortal:Q9R1B9 SMR:Q9R1B9
STRING:Q9R1B9 PhosphoSite:Q9R1B9 PRIDE:Q9R1B9
Ensembl:ENSMUST00000170109 GeneID:20563 KEGG:mmu:20563
UCSC:uc008xjo.2 InParanoid:Q9R1B9 OrthoDB:EOG4D7Z4T ChiTaRS:SLIT2
NextBio:298857 Bgee:Q9R1B9 CleanEx:MM_SLIT2 Genevestigator:Q9R1B9
Uniprot:Q9R1B9
Length = 1521
Score = 181 (68.8 bits), Expect = 9.3e-11, Sum P(2) = 9.3e-11
Identities = 64/246 (26%), Positives = 104/246 (42%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQYLS 106
C+ C++G +CI C C G+ G+ C+ +L + V N SYL+ +
Sbjct: 1117 CDNFDCQNGAQCIIRINEPICQCLPGYLGEKCE-KL-VSVNFVNKESYLQIPSA--KVRP 1172
Query: 107 LLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTG-AATLRSSNPI 165
++T+ E +GILLY G + D IA+ L V ++D G+ A+ + S I
Sbjct: 1173 QTNITLQIATDEDSGILLYKGDK-----DHIAVELYRGRVRASYDTGSHPASAIYSVETI 1227
Query: 166 SLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSPKVK 225
+ G +H + L L VD I + + GG+P N V+ +
Sbjct: 1228 NDGNFHIVELLTLDSSLSLSVDGGSPKVITNLSKQSTLNFDSPLYVGGMPGKNNVASLRQ 1287
Query: 226 IK----SSFIGCIQKVLINNHELNILGEAIQGVNVVNCAHPCITQPCGSGSCVPL-YDGY 280
+SF GCI+ + IN+ EL + ++ PC + C G C P G+
Sbjct: 1288 APGQNGTSFHGCIRNLYINS-ELQDFRKMPMQTGILPGCEPCHKKVCAHGMCQPSSQSGF 1346
Query: 281 KCVCTQ 286
C C +
Sbjct: 1347 TCECEE 1352
Score = 107 (42.7 bits), Expect = 6.5e-06, Sum P(3) = 6.5e-06
Identities = 21/65 (32%), Positives = 30/65 (46%)
Query: 26 WIQLNDGNKIKGRSKECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQ 85
W DG +G + E D C CE+ C+ + CLCP +TG+LC+ +LD
Sbjct: 975 WCTCADG--FEGENCEVNIDDCEDNDCENNSTCVDGINNYTCLCPPEYTGELCEEKLDFC 1032
Query: 86 VPQFN 90
N
Sbjct: 1033 AQDLN 1037
Score = 80 (33.2 bits), Expect = 6.5e-06, Sum P(3) = 6.5e-06
Identities = 25/96 (26%), Positives = 42/96 (43%)
Query: 340 NIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGV 399
NI ++I T SG++L+ G KD +A+ ++ G Y IN+G
Sbjct: 1175 NITLQIATDEDSGILLYKGD---KDHIAVELYRGRVRASYDTGSHPASAIYSVETINDGN 1231
Query: 400 WH---RLTVHRNFMVVMHGSSH---TRSNKSSKIEF 429
+H LT+ + + + G S T +K S + F
Sbjct: 1232 FHIVELLTLDSSLSLSVDGGSPKVITNLSKQSTLNF 1267
Score = 69 (29.3 bits), Expect = 7.9e-05, Sum P(3) = 7.9e-05
Identities = 27/91 (29%), Positives = 45/91 (49%)
Query: 445 LIRIDTDYSMQSISGG---------KFEQLNTDSGLYVGGV---EDIEELTRSKYHH--S 490
L+ +D+ S+ S+ GG K LN DS LYVGG+ ++ L ++ + S
Sbjct: 1237 LLTLDSSLSL-SVDGGSPKVITNLSKQSTLNFDSPLYVGGMPGKNNVASLRQAPGQNGTS 1295
Query: 491 FKGWISNLILSNDYQV--KLPLSRSQGSSCQ 519
F G I NL ++++ Q K+P+ C+
Sbjct: 1296 FHGCIRNLYINSELQDFRKMPMQTGILPGCE 1326
Score = 57 (25.1 bits), Expect = 9.3e-11, Sum P(2) = 9.3e-11
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 262 PCITQPCGSGSCVPLYD-GYKCVCTQ 286
PC+ C G+C+P+ Y C C +
Sbjct: 1366 PCLGNKCVHGTCLPINAFSYSCKCLE 1391
Score = 52 (23.4 bits), Expect = 6.5e-06, Sum P(3) = 6.5e-06
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 263 CITQPCGSGS-CVPLYDGYKCVCTQ 286
C C +G+ C +GY CVC +
Sbjct: 1072 CQDNKCKNGAHCTDAVNGYTCVCPE 1096
Score = 45 (20.9 bits), Expect = 3.2e-05, Sum P(3) = 3.2e-05
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 267 PCGSGS-CVPLYDGYKCVCT 285
PC S C+ G+KC CT
Sbjct: 1038 PCQHDSKCILTPKGFKCDCT 1057
>ZFIN|ZDB-GENE-070122-2 [details] [associations]
symbol:celsr2 "cadherin, EGF LAG seven-pass G-type
receptor 2" species:7955 "Danio rerio" [GO:0004930 "G-protein
coupled receptor activity" evidence=IEA] [GO:0005509 "calcium ion
binding" evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0007156
"homophilic cell adhesion" evidence=IEA] [GO:0007218 "neuropeptide
signaling pathway" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0004888 "transmembrane signaling receptor
activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA;IDA] [GO:0007166 "cell surface receptor signaling
pathway" evidence=IEA] [GO:0021754 "facial nucleus development"
evidence=IMP] [GO:0016337 "cell-cell adhesion"
evidence=IGI;IDA;IMP] [GO:0055113 "epiboly involved in gastrulation
with mouth forming second" evidence=IGI] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0008104 "protein localization"
evidence=IGI] InterPro:IPR000203 InterPro:IPR000742
InterPro:IPR000832 InterPro:IPR001879 InterPro:IPR001881
InterPro:IPR002126 InterPro:IPR015919 InterPro:IPR017981
InterPro:IPR020894 Pfam:PF00002 Pfam:PF00008 Pfam:PF00028
Pfam:PF01825 PRINTS:PR00205 PROSITE:PS00232 PROSITE:PS50026
PROSITE:PS50221 PROSITE:PS50227 PROSITE:PS50261 PROSITE:PS50268
SMART:SM00112 SMART:SM00179 SMART:SM00181 SMART:SM00303
ZFIN:ZDB-GENE-070122-2 GO:GO:0016021 GO:GO:0005886 GO:GO:0008104
GO:GO:0004930 GO:GO:0007218 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0016337 PROSITE:PS01186
eggNOG:NOG12793 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 GO:GO:0007156 GO:GO:0055113 SUPFAM:SSF49313
InterPro:IPR022624 Pfam:PF12003 Gene3D:2.60.40.60 Pfam:PF02210
HOGENOM:HOG000231346 HOVERGEN:HBG050887 OrthoDB:EOG4KKZ23 CTD:1952
KO:K04601 GO:GO:0021754 EMBL:AB246774 IPI:IPI00502412
RefSeq:NP_001074046.1 UniGene:Dr.110394 ProteinModelPortal:A0JBX1
STRING:A0JBX1 GeneID:560426 KEGG:dre:560426 InParanoid:A0JBX1
NextBio:20883440 Uniprot:A0JBX1
Length = 2941
Score = 157 (60.3 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 64/268 (23%), Positives = 105/268 (39%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQYLS 106
CN PC +GG C++ GS C C LGF G C+ + + + G L + L
Sbjct: 1646 CNNNPCLNGGSCVSLWGSFRCDCALGFGGRNCEKVMSNPL-RLQGKGLLWWADLASVMTP 1704
Query: 107 LLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSN-PI 165
+ +F+ +P ++ H + G + L + +V + G + R + +
Sbjct: 1705 PWHMEFMFRTRQPTATVM---HMSSGQQHNFTIQLREGFVVTSVQRGEDSVVSRVDDVTV 1761
Query: 166 SLGEWHKLRLTRTGRH-----AYLQVDR--FPSSQILSPGPFTQXXXXXXXXXGGVPDYN 218
S G+WH + L G A L +D + SS L + GGV D
Sbjct: 1762 SDGQWHHVSLELKGPATGGVTATLSLDYGLYTSSMDLDSK--LKGVRLKTLSVGGVSD-- 1817
Query: 219 IVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVN----CAHP--CITQPCGSGS 272
+ ++ F GCIQ + I ++ V+N C+ P C + PC + S
Sbjct: 1818 ---GRNRVIGGFRGCIQGLRIGGDSSTPAFPSMPQARVLNVESGCSLPNTCGSNPCPAHS 1874
Query: 273 -CVPLYDGYKCVCTQSCKESHLTEVMCA 299
C +D + C C + T+ CA
Sbjct: 1875 DCKDDWDAHSCRCHTGYYGNSCTDA-CA 1901
Score = 153 (58.9 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 41/130 (31%), Positives = 64/130 (49%)
Query: 46 KCNKTPCEHGGKCITT-PGSSYCLCPLG-FTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQ 103
+C + C++GG C+ G C CP G F C L F +++ ++GL ++
Sbjct: 1398 RCAEGVCKNGGTCLNLLVGGFRCECPSGGFEKPFCL----LSSRNFPPQTFITFKGLRQR 1453
Query: 104 YLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRS-- 161
+ L L+ F EPNG+LLYNG R + DFIA+ + ++ + TF G T+
Sbjct: 1454 FHFTLSLS--FATREPNGLLLYNG-RFNEKHDFIAMEIVNQQIQLTFSAGGTKTTVLPFI 1510
Query: 162 SNPISLGEWH 171
+S G WH
Sbjct: 1511 EGGVSDGHWH 1520
Score = 92 (37.4 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 39/198 (19%), Positives = 77/198 (38%)
Query: 212 GGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNCAHP---CITQPC 268
GGVP P V+ + FIGC++ + I+ +++ G + C+ C PC
Sbjct: 1594 GGVPKLPEEFP-VQNRQ-FIGCMKDLRIDERHVDMAGFIANNGTLPGCSAKRNFCNNNPC 1651
Query: 269 -GSGSCVPLYDGYKCVCTQSCKESHLTEVMCASFDHGASFLHYLDPEIIHSSGLLHYKFQ 327
GSCV L+ ++C C + +VM +P + GLL +
Sbjct: 1652 LNGGSCVSLWGSFRCDCALGFGGRNCEKVMS-------------NPLRLQGKGLLWWADL 1698
Query: 328 LHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXX 387
V +T ++++ +T + ++ S Q +F + + G+
Sbjct: 1699 ASV---MTP-PWHMEFMFRTRQPTATVMHMSSGQQHNF-TIQLREGFVVTSVQRGEDSVV 1753
Query: 388 XXXXQTKINNGVWHRLTV 405
+++G WH +++
Sbjct: 1754 SRVDDVTVSDGQWHHVSL 1771
Score = 42 (19.8 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 39 SKECL--EDK-CNKTPCEHGGKCIT 60
S+E L +D C + PCE+ KC++
Sbjct: 1288 SQEVLPFDDNICLREPCENYMKCVS 1312
Score = 39 (18.8 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 25/96 (26%), Positives = 40/96 (41%)
Query: 400 WHRLTVHRNFM---VVMHGSSHTRSNKSSKIE--FKCLSIQRLHRTGKQCLI-RID---- 449
WH + R VMH SS + N + ++ F S+QR G+ ++ R+D
Sbjct: 1706 WHMEFMFRTRQPTATVMHMSSGQQHNFTIQLREGFVVTSVQR----GEDSVVSRVDDVTV 1761
Query: 450 TDYSMQSIS--------GGKFEQLNTDSGLYVGGVE 477
+D +S GG L+ D GLY ++
Sbjct: 1762 SDGQWHHVSLELKGPATGGVTATLSLDYGLYTSSMD 1797
>UNIPROTKB|F1MEG3 [details] [associations]
symbol:LAMA1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0061304 "retinal blood vessel morphogenesis"
evidence=IEA] [GO:0060445 "branching involved in salivary gland
morphogenesis" evidence=IEA] [GO:0060441 "epithelial tube branching
involved in lung morphogenesis" evidence=IEA] [GO:0045198
"establishment of epithelial cell apical/basal polarity"
evidence=IEA] [GO:0043208 "glycosphingolipid binding" evidence=IEA]
[GO:0031175 "neuron projection development" evidence=IEA]
[GO:0007166 "cell surface receptor signaling pathway" evidence=IEA]
[GO:0005911 "cell-cell junction" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005608 "laminin-3 complex"
evidence=IEA] [GO:0005606 "laminin-1 complex" evidence=IEA]
[GO:0005201 "extracellular matrix structural constituent"
evidence=IEA] [GO:0002011 "morphogenesis of an epithelial sheet"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005102
"receptor binding" evidence=IEA] InterPro:IPR009254
InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009 GO:GO:0005615
GO:GO:0030155 GO:GO:0007155 GO:GO:0005911 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
GO:GO:0007166 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
Pfam:PF00054 SMART:SM00180 SMART:SM00282 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 GO:GO:0031175 GO:GO:0060441
GO:GO:0060445 GO:GO:0045198 GO:GO:0045995 GO:GO:0005201
GO:GO:0043208 GO:GO:0002011 GeneTree:ENSGT00700000104140
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 GO:GO:0061304 OMA:EPFYWRL
GO:GO:0005606 GO:GO:0005608 EMBL:DAAA02056788 EMBL:DAAA02056789
EMBL:DAAA02056790 EMBL:DAAA02056791 EMBL:DAAA02056792
IPI:IPI01000434 Ensembl:ENSBTAT00000024169 Uniprot:F1MEG3
Length = 3031
Score = 142 (55.0 bits), Expect = 1.1e-06, Sum P(4) = 1.1e-06
Identities = 57/202 (28%), Positives = 92/202 (45%)
Query: 89 FNGSSYLRYQGLGEQYL--SLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYV 146
F GS Y + E+ L ++ + ++F PNG+LLY ++G DF+++ L D V
Sbjct: 2265 FAGSGY----SVVEKTLRATVTQIIMLFSTYSPNGLLLYLA--SNGTKDFLSIDLVDGRV 2318
Query: 147 DFTFDLGTGAATLRSSNPISLGEWHKLRLTRTGRHAYLQV-DRFPSS-----QILSPGPF 200
T DLG+G L + + G W+K+ R + L V D + ++ Q +PG
Sbjct: 2319 RVTVDLGSGPLALITDRRYNNGTWYKIAFQRNKKQGLLAVIDAYNTTYKETKQGETPGAS 2378
Query: 201 TQXXXXXXX--XXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVN 258
+ GG+P +V V KS ++GCI+ + I+ ++L + GV
Sbjct: 2379 SDLNRLDKDPIYVGGLPRSRVVRKGVSSKS-YVGCIKNLEISRSTFDLLRNSY-GVR--- 2433
Query: 259 CAHPCITQPCGSGSCVPLYDGY 280
CI +P S S L GY
Sbjct: 2434 --KGCILEPVRSVSF--LRGGY 2451
Score = 140 (54.3 bits), Expect = 6.8e-05, Sum P(3) = 6.8e-05
Identities = 68/292 (23%), Positives = 118/292 (40%)
Query: 134 GDFIALYLNDRYVDFTFDLGTGAATLRS--SNPISL---GEWHKLRLTRTGRHAYLQVDR 188
G F ++ L + +V+ + G G + R+ P G+ H + + R+GR +QVD
Sbjct: 2496 GPFWSIMLIEGHVEVHVNPGDGTSLRRALLHAPTGTYGDGQEHSISMIRSGRVVTVQVDE 2555
Query: 189 F-PSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNIL 247
P L P ++ GG+P+ +P +K++SSF GCI+ ++ N L+
Sbjct: 2556 TTPVEMKLGPSAESRTINVSSLYVGGIPEGE-GTPMLKMRSSFHGCIRNLVFNMELLDFT 2614
Query: 248 GEA-IQGVNVVNCAHPCITQPCGSGSCVPLYDGYKCVCTQSCKESHLTEVMCASFDHGAS 306
A + ++ +C+ +P V DG + Q L CA+ +
Sbjct: 2615 SAADYEHADLDSCS--LSGRP---KLAVYREDGERPPEPQPLPSPEL----CAT-ERAPE 2664
Query: 307 FLHYLDPEIIHSSGLLHYKFQLHVDFRITGYE--FNIDMRIKTSSSSGLILWTGSSQSKD 364
++ P H GL L + F ++ +RI+T +SSGL+ + D
Sbjct: 2665 YI----PNA-HQFGLAEGS-HLVLPFNQLAVRKRLSVQLRIRTFASSGLVFYMAHQNQVD 2718
Query: 365 FLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGVWHRLTVH----RNFMVV 412
AL +H G H + +++G WH + R FM V
Sbjct: 2719 HAALQLHAGRLHFTFDLGKGRTKVSH-PALLSDGQWHTVKTEYFKRRGFMTV 2769
Score = 128 (50.1 bits), Expect = 1.3e-10, Sum P(4) = 1.3e-10
Identities = 41/146 (28%), Positives = 64/146 (43%)
Query: 110 LTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSN-PISLG 168
LT+ K EP+ +L Y G DF+A+ + V F +DLG+G+ L + PI
Sbjct: 2097 LTLNVKTSEPDNLLFYLGSSTSA--DFLAVEMRRGKVAFLWDLGSGSTRLEFPDFPIDDN 2154
Query: 169 EWHKLRLTRTGRHAYLQVDRFPSSQ------ILSPGP--FTQXXXXXXXXXGGVPDYNIV 220
+WH + +TR G L V ++Q SPG GG+
Sbjct: 2155 KWHGIYVTRFGNIGSLSVKEMSAAQKPPPRTSKSPGTAKVLDVNNSTMMFVGGLGGQIKK 2214
Query: 221 SPKVKIKSSFIGCIQKVLINNHELNI 246
SP VK+ + F GC+ + +N + +
Sbjct: 2215 SPAVKV-THFKGCMGEAFLNGQSIGL 2239
Score = 127 (49.8 bits), Expect = 3.8e-05, Sum P(4) = 3.8e-05
Identities = 43/178 (24%), Positives = 75/178 (42%)
Query: 108 LDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSNPISL 167
L + + + +G++ Y H+ + V D AL L+ + FTFDLG G + +S
Sbjct: 2693 LSVQLRIRTFASSGLVFYMAHQ-NQV-DHAALQLHAGRLHFTFDLGKGRTKVSHPALLSD 2750
Query: 168 GEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSPKVKIK 227
G+WH ++ R ++ VD S + + G T GG+P I
Sbjct: 2751 GQWHTVKTEYFKRRGFMTVDGQESPVVTTVGDATTLDVEGKLYLGGLPSEYRARNTGNIT 2810
Query: 228 SSFIGCIQKVLINNHELNILGEAIQGVNVVNCAHPCITQPC----GSGSCVPLYDGYK 281
S C+ +V +N+ +L+ + + V C + Q GSG + +GY+
Sbjct: 2811 HSVPACLGEVTVNSQQLH-MDIPMSAFAVTRCY--AVAQEGTFFEGSGYAALVREGYR 2865
Score = 89 (36.4 bits), Expect = 1.3e-10, Sum P(4) = 1.3e-10
Identities = 20/68 (29%), Positives = 34/68 (50%)
Query: 341 IDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGVW 400
I M T S +GL+L+ S+ +KDFL++ + +G V + + NNG W
Sbjct: 2284 IIMLFSTYSPNGLLLYLASNGTKDFLSIDLVDGRVRVTVDLGSGPLALITDR-RYNNGTW 2342
Query: 401 HRLTVHRN 408
+++ RN
Sbjct: 2343 YKIAFQRN 2350
Score = 75 (31.5 bits), Expect = 1.3e-10, Sum P(4) = 1.3e-10
Identities = 23/87 (26%), Positives = 38/87 (43%)
Query: 439 RTGKQCLIRIDTDYSMQSISGGKFEQLNTD-SGLYVGGVEDIEELTRSKYHHSFKGWISN 497
R+G+ +++D ++ G E + S LYVGG+ + E K SF G I N
Sbjct: 2544 RSGRVVTVQVDETTPVEMKLGPSAESRTINVSSLYVGGIPEGEGTPMLKMRSSFHGCIRN 2603
Query: 498 LILSN---DYQVKLPLSRSQGSSCQLT 521
L+ + D+ + SC L+
Sbjct: 2604 LVFNMELLDFTSAADYEHADLDSCSLS 2630
Score = 60 (26.2 bits), Expect = 1.1e-06, Sum P(4) = 1.1e-06
Identities = 21/81 (25%), Positives = 39/81 (48%)
Query: 332 FRITGYEFNIDMRIKTSSSSGLILWTGSSQSK-DFLALGIHNGYA--HVMYXXXXXXXXX 388
+R+ + NI + +TSS +G++L G S +K D + L I +G HV
Sbjct: 2864 YRVRS-DVNITLEFRTSSENGVLL--GISSAKVDAIGLEIVDGKLLFHVNNGAGRITATY 2920
Query: 389 X-XXQTKINNGVWHRLTVHRN 408
+++ +G WH L +++
Sbjct: 2921 EPKTPSRLCDGRWHTLQANKS 2941
Score = 49 (22.3 bits), Expect = 4.6e-08, Sum P(4) = 4.6e-08
Identities = 14/43 (32%), Positives = 23/43 (53%)
Query: 466 NTDSGLYVGGVE-DIEELTRSKYHHSFKGWISNLILSNDYQVK 507
+T +YVGG D+++ S SF+G + L L+ QV+
Sbjct: 2967 DTSDPIYVGGYPADVKQNCLSS-RTSFRGCVRRLTLTKGPQVQ 3008
Score = 48 (22.0 bits), Expect = 5.8e-08, Sum P(4) = 5.8e-08
Identities = 21/75 (28%), Positives = 34/75 (45%)
Query: 432 LSIQRLHRTGKQCLI-RIDTDY--SMQSISGGKFEQLNT-DSG-LYVGGVEDIEELTRSK 486
++ QR + G +I +T Y + Q + G LN D +YVGG+ + +
Sbjct: 2345 IAFQRNKKQGLLAVIDAYNTTYKETKQGETPGASSDLNRLDKDPIYVGGLPRSRVVRKGV 2404
Query: 487 YHHSFKGWISNLILS 501
S+ G I NL +S
Sbjct: 2405 SSKSYVGCIKNLEIS 2419
Score = 47 (21.6 bits), Expect = 1.3e-10, Sum P(4) = 1.3e-10
Identities = 12/34 (35%), Positives = 14/34 (41%)
Query: 47 CNKTPCE-HGG-KCITTPGSSYCLCPLGFTGDLC 78
C + C HG GS C+C G TG C
Sbjct: 1460 CQRCDCSPHGSVHSDCDRGSGQCICRPGATGLRC 1493
Score = 45 (20.9 bits), Expect = 2.0e-10, Sum P(4) = 2.0e-10
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 66 YCLCPLGFTGDLCQTRL 82
+C CP G+ G C++ L
Sbjct: 663 HCECPQGYAGISCESCL 679
Score = 45 (20.9 bits), Expect = 2.0e-10, Sum P(4) = 2.0e-10
Identities = 13/37 (35%), Positives = 16/37 (43%)
Query: 42 CLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLC 78
CL CN + C TP +CLC G G+ C
Sbjct: 903 CLP--CNCSAGSLSDDC--TP-EGHCLCVPGVAGEKC 934
Score = 44 (20.5 bits), Expect = 2.6e-10, Sum P(4) = 2.6e-10
Identities = 11/38 (28%), Positives = 14/38 (36%)
Query: 47 CNKTPCEHG-GKCITTPGSSYCLCPLGFTGDLCQTRLD 83
C C H C P + C+CP G C+ D
Sbjct: 949 CTPCDCAHTQNTC--DPETGECVCPPHTRGAACEECAD 984
Score = 42 (19.8 bits), Expect = 4.0e-10, Sum P(4) = 4.0e-10
Identities = 9/26 (34%), Positives = 12/26 (46%)
Query: 54 HGGKCITTPGSSYCLCPLGFTGDLCQ 79
H G+ + C+CP G G CQ
Sbjct: 1304 HAGRVVALLLEK-CVCPPGTAGLSCQ 1328
>UNIPROTKB|E1BKL9 [details] [associations]
symbol:FAT1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0030175 "filopodium" evidence=IEA] [GO:0030027 "lamellipodium"
evidence=IEA] [GO:0007163 "establishment or maintenance of cell
polarity" evidence=IEA] [GO:0007015 "actin filament organization"
evidence=IEA] [GO:0005911 "cell-cell junction" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007156 "homophilic cell adhesion" evidence=IEA] [GO:0005509
"calcium ion binding" evidence=IEA] InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR002126 InterPro:IPR015919
InterPro:IPR018097 InterPro:IPR020894 Pfam:PF00008 Pfam:PF00028
Pfam:PF07645 PRINTS:PR00205 PROSITE:PS00232 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS50268 SMART:SM00112 SMART:SM00179
SMART:SM00181 InterPro:IPR000152 GO:GO:0016021 GO:GO:0005886
GO:GO:0005634 GO:GO:0048471 GO:GO:0007015 GO:GO:0007163
GO:GO:0005509 GO:GO:0005911 GO:GO:0030027 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030175 PROSITE:PS01186
InterPro:IPR001791 SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025
GO:GO:0007156 SUPFAM:SSF49313 Gene3D:2.60.40.60
GeneTree:ENSGT00700000104156 Pfam:PF02210 OMA:PYEAFIV
EMBL:DAAA02060206 EMBL:DAAA02060207 EMBL:DAAA02060208
IPI:IPI00697004 Ensembl:ENSBTAT00000027527 Uniprot:E1BKL9
Length = 4587
Score = 187 (70.9 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 61/256 (23%), Positives = 111/256 (43%)
Query: 47 CNKTPCEHGGKCITTPGS-SY-CLCPLGFTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQY 104
C PC G +C+T P +Y C+CP G +G C + F G+S+++Y+ + +
Sbjct: 3794 CEDNPCPEGSECVTDPREETYTCVCPGGKSGQ-CPGSASVT---FTGNSFVKYRLMENEN 3849
Query: 105 LSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLR-SSN 163
+ LT+ + + +++Y A G D+ L +++ + + FD G+G + S
Sbjct: 3850 KLEMKLTMRLRTYSAHAVVMY----ARGT-DYSILEIHNGRLQYKFDCGSGPGIVSVQSI 3904
Query: 164 PISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGG-VPDYNIVSP 222
++ G WH + L G +A L +D+ ++ +PG GG V
Sbjct: 3905 QVNDGLWHAVSLEVNGNYARLVLDQVHTASGTAPGTLKTLNLDSHVYFGGHVRQQGSRHG 3964
Query: 223 KV-KIKSSFIGCIQKVLINNHELNI------LGEAIQGVNV-----VNCAHPCITQPCGS 270
+ ++ + F GC+ + +N EL + + V+V + C + PC +
Sbjct: 3965 RSPQVGNGFRGCMDSIYLNGQELPLNNRPRSYAHIEESVDVSPGCLLTATEDCSSSPCQN 4024
Query: 271 GS-CVPL-YDGYKCVC 284
G C P GY C C
Sbjct: 4025 GGVCHPSPTGGYYCKC 4040
Score = 59 (25.8 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 11/35 (31%), Positives = 16/35 (45%)
Query: 263 CITQPCGSGS-CVPLYDGYKCVCTQSCKESHLTEV 296
C PC +G+ C + Y C C+ K H +V
Sbjct: 4131 CAGNPCRNGALCENTHGSYHCNCSHEYKGKHCEDV 4165
Score = 49 (22.3 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 9/23 (39%), Positives = 11/23 (47%)
Query: 263 CITQPC-GSGSCVPLYDGYKCVC 284
C +PC G+C DG C C
Sbjct: 4093 CKDEPCKNGGTCFDSLDGAVCQC 4115
Score = 46 (21.3 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 261 HPCITQPC-GSGSCVP-----------LYDGYKCVCTQSCKE 290
+PC + PC G+C+ LY G +C + CK+
Sbjct: 4054 NPCSSNPCLYGGTCIVDNGDFVCQCRGLYSGQRCQLSPYCKD 4095
>ZFIN|ZDB-GENE-070206-10 [details] [associations]
symbol:nrxn3b "neurexin 3b" species:7955 "Danio
rerio" [GO:0004872 "receptor activity" evidence=IEA] [GO:0007268
"synaptic transmission" evidence=IEA] [GO:0007416 "synapse
assembly" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA;ISS] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR000742 InterPro:IPR027149 PROSITE:PS50026 SMART:SM00181
ZFIN:ZDB-GENE-070206-10 GO:GO:0016021 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025 Pfam:PF02210
InterPro:IPR003585 SMART:SM00294 GeneTree:ENSGT00560000076996
PANTHER:PTHR10127:SF405 EMBL:BX088548 EMBL:CABZ01064259
EMBL:CABZ01064260 EMBL:CABZ01064261 EMBL:CABZ01064262
EMBL:CABZ01064263 EMBL:CABZ01064264 EMBL:CABZ01064265
EMBL:CABZ01064266 EMBL:CABZ01064267 EMBL:CABZ01064268
EMBL:CABZ01064269 EMBL:CABZ01064270 EMBL:CABZ01064271
EMBL:CABZ01064272 EMBL:CABZ01064273 EMBL:CABZ01064274
EMBL:CABZ01064275 EMBL:CABZ01064276 EMBL:CABZ01064277
EMBL:CABZ01064278 EMBL:CABZ01064279 EMBL:CABZ01064280
EMBL:CABZ01068890 EMBL:CABZ01068891 EMBL:CABZ01068892
EMBL:CABZ01068893 EMBL:CABZ01068894 IPI:IPI00999075
Ensembl:ENSDART00000127050 Uniprot:F1R5P7
Length = 1687
Score = 198 (74.8 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 77/324 (23%), Positives = 143/324 (44%)
Query: 97 YQGLGE-QYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTG 155
Y GL Q S + L FK +G +L+N DG DFIA+ L Y+ + F+LG G
Sbjct: 884 YLGLATLQAYSTMHLFFQFKTTSGDGFILFNS--GDG-NDFIAVELVKGYIHYVFNLGNG 940
Query: 156 AATLR--SSNPISLGEWHKLRLTRTGRHAY-LQVDRFPSSQILSPGPFTQXXXXXXXXXG 212
+ L+ S +P++ +WH + +TR + + L+VD SQ+++ G G
Sbjct: 941 PSLLKGNSDSPLNDNQWHNVVITRDASNTHTLKVDAKSVSQVVN-GAKNLDLKGDLFVAG 999
Query: 213 GVPDYNIVSPKVKI-KSSFIGCIQKVLINNHELNILGEAI--QGVNVVNCAHP---CITQ 266
P+ PK+ + + F GC+ + +N +++ +A+ G C P C
Sbjct: 1000 LGPNMYQNLPKLVVSREGFQGCLASMDLNGRLPDLINDALFRSGQIERGCEGPSTTCQED 1059
Query: 267 PCGS-GSCVPLYDGYKCVCTQSCKESHLTEVMCASFDHGASFLHYLDPEIIHSSGLLHYK 325
C + G C+ ++ + C C+ + S+ + C D GA+++ GL+ Y
Sbjct: 1060 SCANMGVCIQQWENFTCDCSMT---SY-SGTQCN--DPGATYIFG------KGGGLIMYT 1107
Query: 326 FQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSS-QSKDFLALGIHNGYAHVMYXXXXX 384
+ + R + + + T+ G+++ S+ + D++ L I G V +
Sbjct: 1108 WPNNE--RPSTRTDRLAVGFSTTIKDGILVRIDSAPRLGDYIMLHIEEGKVCVTFNIGTV 1165
Query: 385 XXXXXXXQTKINNGVWHRLTVHRN 408
T++N+G +H + RN
Sbjct: 1166 DISVKEMTTEVNDGKYHVVRFTRN 1189
Score = 185 (70.2 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 107/453 (23%), Positives = 167/453 (36%)
Query: 77 LCQTRLDLQVP-QFNGSS--YLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGV 133
L T L L + +F GS + RY S DL+ FK + ++LY G
Sbjct: 13 LLSTFLSLGLGLEFTGSEGQWARYLRWDASTRS--DLSFQFKTAISDALVLYFDD--GGY 68
Query: 134 GDFIALYLNDRYVDFTFDLGTGAATLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQ 193
DF+ L + D + F + T+ S ++ WH ++R L +D S+
Sbjct: 69 CDFLLLSIEDAKLKLHFSVDCAETTITSDKMVNDSHWHFATISRHNLRTVLALDG--DSK 126
Query: 194 ILSPGPFTQXXXXXXXXX-GGVP-DYN---IVSPKVKIKSSFIGCIQKVLINNHELNILG 248
+ P Q GGVP D + P K F G I + N LG
Sbjct: 127 VDEVRPQRQFMKIVSDLYLGGVPQDIRTSALTLPAAKEMPPFKGIITDLGYGNKVPTRLG 186
Query: 249 EAIQGVNVVNCAHPCITQPCGSGSCVPLYDGYK-CVCTQSCKES-HLTEVM--CASFDHG 304
Q V + C PC +G + DG C C+++ + E + F H
Sbjct: 187 S--QKVRL-EMEGFCTENPCENGGSCSMADGEAYCDCSKTGYAGRYCNEAVNKTPGFAHM 243
Query: 305 ASFLHYLDPEIIHSSGLLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSKD 364
+ + G ++ + L + I I + KT +GLIL TG +S D
Sbjct: 244 VKSPQAREENVATFRGSEYFCYDLSQN-PIQSSSDEITLSFKTWQRNGLILHTG--KSAD 300
Query: 365 FLALGIHNGYAHVMYXXXXXXXXXXXXQT--KINNGVWHRLTVHRNFMVVMH-GSSHTRS 421
++ L + +G ++ K N+ WH + V RN H G H
Sbjct: 301 YVNLALKDGAVSLVINLGSGAFEAIVEPVNGKFNDNAWHDIKVTRNLR--QHSGIGHAMV 358
Query: 422 NKSSKIEFKCLSIQRLHRTGKQCLIRIDTD--YSMQSISGGKFEQLNTDSGLYVGGVEDI 479
NK LH CL+ I D + + + L +D YVGG
Sbjct: 359 NK-------------LH-----CLVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPST 400
Query: 480 EELTRSKYHHSFKGWISNLILSNDYQVKLPLSR 512
+L S ++F G + ++ N+ ++L LSR
Sbjct: 401 ADLPGSPVSNNFMGCLKEVVYKNN-DIRLELSR 432
Score = 164 (62.8 bits), Expect = 1.6e-06, Sum P(3) = 1.6e-06
Identities = 73/324 (22%), Positives = 138/324 (42%)
Query: 114 FKAIEPNGILLYN-----------GHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSS 162
F+ EPNG++L+ R++ V DF A+ L D ++ D+G+G ++++
Sbjct: 486 FRTSEPNGLILFTQGKPQDKKDSRSQRSNKV-DFFAVELLDGHLYLLLDMGSGTIKVKAT 544
Query: 163 -NPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDY--NI 219
N ++ G WH + + R GR + V+ + + G GG+PD ++
Sbjct: 545 QNKVNDGVWHHVDIQRDGRSGIISVNS-RRTPFTASGENEILDLEGNLYLGGLPDNRADL 603
Query: 220 VSPK----VKIKSSFIGCIQKVLINNHELNI--LGEAIQGVNVV--NC----AHPCITQP 267
+ P + ++GCI+ + I+ +I + EA Q V + +C A C +
Sbjct: 604 ILPTELWTAMLNYGYVGCIRDLFIDGRSKDIRQIAEA-QNVGGIKSSCSKVTAKQCDSNS 662
Query: 268 C-GSGSCVPLYDGYKCVCTQSC---KESHLTEVMCASFDHGASFLHYLDPEIIHSSGLLH 323
C +G C ++ + C CT + + E S+D G+ ++ + P IIH+
Sbjct: 663 CKNNGICKEGWNRFICDCTGTGYWDRTCERAEASILSYD-GSMYMKVVMPTIIHTEA--- 718
Query: 324 YKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXX 383
E ++ +R + + GL++ S +S D L L + +G ++
Sbjct: 719 --------------E-DVSLRFMSQRAFGLLMAATSRESADTLRLELDSGRVKLIVNLGK 763
Query: 384 XXXXXXXXQTKINNGVWHRLTVHR 407
Q K+N+ WH + V R
Sbjct: 764 GPETLYAGQ-KVNDNDWHSVRVTR 786
Score = 100 (40.3 bits), Expect = 1.8e-05, Sum P(4) = 1.8e-05
Identities = 41/149 (27%), Positives = 64/149 (42%)
Query: 29 LNDGNKIK---GRSKECLEDK--CNKTPCEHGGKCITTPGSSYCLCP-LGFTGDLCQTRL 82
L GNK+ G K LE + C + PCE+GG C G +YC C G+ G C +
Sbjct: 175 LGYGNKVPTRLGSQKVRLEMEGFCTENPCENGGSCSMADGEAYCDCSKTGYAGRYCNEAV 234
Query: 83 DLQVPQFNG---SSYLRYQGL----GEQYLSLLDLTI-VFKAIEPNGILLYNGHRADGV- 133
+ + P F S R + + G +Y DL+ ++ L + + +G+
Sbjct: 235 N-KTPGFAHMVKSPQAREENVATFRGSEYFCY-DLSQNPIQSSSDEITLSFKTWQRNGLI 292
Query: 134 ------GDFIALYLNDRYVDFTFDLGTGA 156
D++ L L D V +LG+GA
Sbjct: 293 LHTGKSADYVNLALKDGAVSLVINLGSGA 321
Score = 91 (37.1 bits), Expect = 1.8e-05, Sum P(4) = 1.8e-05
Identities = 23/81 (28%), Positives = 39/81 (48%)
Query: 340 NIDMRIKTSSSSGLILWT-GSSQSK-----------DFLALGIHNGYAHVMYXXXXXXXX 387
+I +TS +GLIL+T G Q K DF A+ + +G+ +++
Sbjct: 481 SISFDFRTSEPNGLILFTQGKPQDKKDSRSQRSNKVDFFAVELLDGHLYLLLDMGSGTIK 540
Query: 388 XXXXQTKINNGVWHRLTVHRN 408
Q K+N+GVWH + + R+
Sbjct: 541 VKATQNKVNDGVWHHVDIQRD 561
Score = 50 (22.7 bits), Expect = 1.8e-05, Sum P(4) = 1.8e-05
Identities = 12/42 (28%), Positives = 24/42 (57%)
Query: 437 LHRTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVED 478
+ R G+ +I +++ + + SG E L+ + LY+GG+ D
Sbjct: 558 IQRDGRSGIISVNSRRTPFTASGEN-EILDLEGNLYLGGLPD 598
Score = 42 (19.8 bits), Expect = 1.6e-06, Sum P(3) = 1.6e-06
Identities = 10/38 (26%), Positives = 20/38 (52%)
Query: 436 RLHRTGKQCLIRIDTDYSMQSISGG--KFEQLNTDSGL 471
R+ R GK + +D D + ++G + E N ++G+
Sbjct: 783 RVTRRGKNIKLMVDDDVAEGQMNGDHTRLEFSNVETGI 820
Score = 38 (18.4 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 7/21 (33%), Positives = 14/21 (66%)
Query: 11 DDWNTVRVFRHRWDAWIQLND 31
+DW++VRV R + + ++D
Sbjct: 777 NDWHSVRVTRRGKNIKLMVDD 797
Score = 37 (18.1 bits), Expect = 1.6e-06, Sum P(3) = 1.6e-06
Identities = 8/34 (23%), Positives = 15/34 (44%)
Query: 2 VKSDNQVILDDWNTVRVFRHRWDAWIQLNDGNKI 35
+ SD V W+ + RH + L+ +K+
Sbjct: 94 ITSDKMVNDSHWHFATISRHNLRTVLALDGDSKV 127
>FB|FBgn0264089 [details] [associations]
symbol:sli "slit" species:7227 "Drosophila melanogaster"
[GO:0031012 "extracellular matrix" evidence=IDA] [GO:0008347 "glial
cell migration" evidence=IMP] [GO:0050919 "negative chemotaxis"
evidence=IMP] [GO:0007509 "mesoderm migration involved in
gastrulation" evidence=IMP] [GO:0005578 "proteinaceous
extracellular matrix" evidence=TAS] [GO:0008078 "mesodermal cell
migration" evidence=IMP] [GO:0007411 "axon guidance"
evidence=IGI;IMP;IPI] [GO:0035385 "Roundabout signaling pathway"
evidence=IGI] [GO:0030182 "neuron differentiation" evidence=IMP]
[GO:0010632 "regulation of epithelial cell migration" evidence=IMP]
[GO:2000274 "regulation of epithelial cell migration, open tracheal
system" evidence=IMP] [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0007427 "epithelial cell migration, open tracheal
system" evidence=IMP] [GO:0016199 "axon midline choice point
recognition" evidence=IMP] [GO:0001764 "neuron migration"
evidence=IMP] [GO:0007432 "salivary gland boundary specification"
evidence=IMP] [GO:0035050 "embryonic heart tube development"
evidence=IMP] [GO:0022409 "positive regulation of cell-cell
adhesion" evidence=IMP] [GO:0071666 "Slit-Robo signaling complex"
evidence=IDA] [GO:0048495 "Roundabout binding" evidence=IPI]
[GO:0008201 "heparin binding" evidence=IDA] [GO:0003151 "outflow
tract morphogenesis" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0008406 "gonad development" evidence=IMP] [GO:0007502
"digestive tract mesoderm development" evidence=IMP] [GO:0046331
"lateral inhibition" evidence=IMP] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 EMBL:AE013599
GO:GO:0005886 GO:GO:0001764 GO:GO:0008406 GO:GO:0005578
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0016199 GO:GO:0008201 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
Reactome:REACT_113552 GO:GO:0048813 PROSITE:PS01186 GO:GO:0046331
InterPro:IPR001791 Pfam:PF00054 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 GO:GO:0007427 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0003151 GO:GO:0008078 GO:GO:0008347
GO:GO:0007432 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 GO:GO:0022409 InterPro:IPR026906 Pfam:PF13306
GO:GO:2000274 GO:GO:0035050 Pfam:PF01463 GO:GO:0007502
GeneTree:ENSGT00700000104083 GO:GO:0035385 KO:K06839 GO:GO:0050929
EMBL:X53959 EMBL:AF126540 EMBL:M23543 PIR:A36665 PIR:B36665
RefSeq:NP_001097333.1 RefSeq:NP_001097334.1 RefSeq:NP_476727.1
RefSeq:NP_476728.1 RefSeq:NP_476729.1 UniGene:Dm.4729 PDB:1W8A
PDBsum:1W8A ProteinModelPortal:P24014 SMR:P24014 STRING:P24014
PaxDb:P24014 EnsemblMetazoa:FBtr0330731 EnsemblMetazoa:FBtr0330733
GeneID:36746 KEGG:dme:Dmel_CG8355 CTD:36746 FlyBase:FBgn0003425
InParanoid:P24014 OMA:RHKMFKG OrthoDB:EOG46DJHK PhylomeDB:P24014
EvolutionaryTrace:P24014 GenomeRNAi:36746 NextBio:800151
Bgee:P24014 GermOnline:CG8355 GO:GO:0071666 Uniprot:P24014
Length = 1504
Score = 173 (66.0 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 62/223 (27%), Positives = 107/223 (47%)
Query: 47 CNKTPCEHGGKCI--TTPGSSY-CLCPLGFTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQ 103
C C+HG C GS Y C C G+TG C+ + N S++ + L +
Sbjct: 1139 CQNHECKHG-VCFQPNAQGSDYLCRCHPGYTGKWCEYLTSISFVHNN--SFVELEPLRTR 1195
Query: 104 YLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTG-AATLRSS 162
+ ++TIVF + E NGIL+Y+G A +A+ L + + ++D+G +T+ S
Sbjct: 1196 PEA--NVTIVFSSAEQNGILMYDGQDAH-----LAVELFNGRIRVSYDVGNHPVSTMYSF 1248
Query: 163 NPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVP-DYNIVS 221
++ G++H + L ++ L+VDR + I++ G GG+P D +
Sbjct: 1249 EMVADGKYHAVELLAIKKNFTLRVDRGLARSIINEGSNDYLKLTTPMFLGGLPVDPAQQA 1308
Query: 222 PK---VKIKSSFIGCIQKVLINNHELNILGEAIQGVNVV-NCA 260
K ++ +SF GC+++V IN H+L G A + + CA
Sbjct: 1309 YKNWQIRNLTSFKGCMKEVWIN-HKLVDFGNAQRQQKITPGCA 1350
Score = 63 (27.2 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 13/27 (48%), Positives = 15/27 (55%)
Query: 262 PCITQPCGSGS-CVP---LYDGYKCVC 284
PC+ C GS CVP DGY+C C
Sbjct: 1380 PCLENKCRRGSRCVPNSNARDGYQCKC 1406
>UNIPROTKB|O94813 [details] [associations]
symbol:SLIT2 "Slit homolog 2 protein" species:9606 "Homo
sapiens" [GO:0001656 "metanephros development" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0010629 "negative regulation of gene expression"
evidence=IEA] [GO:0016337 "cell-cell adhesion" evidence=IEA]
[GO:0033563 "dorsal/ventral axon guidance" evidence=IEA]
[GO:0045499 "chemorepellent activity" evidence=IEA] [GO:0060763
"mammary duct terminal end bud growth" evidence=IEA] [GO:0001657
"ureteric bud development" evidence=IMP] [GO:0050929 "induction of
negative chemotaxis" evidence=IDA] [GO:0050772 "positive regulation
of axonogenesis" evidence=TAS] [GO:0005615 "extracellular space"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0031290
"retinal ganglion cell axon guidance" evidence=IDA] [GO:0009986
"cell surface" evidence=IDA] [GO:0048495 "Roundabout binding"
evidence=IPI] [GO:0043237 "laminin-1 binding" evidence=IDA]
[GO:0042803 "protein homodimerization activity" evidence=IDA]
[GO:0050919 "negative chemotaxis" evidence=IDA;IMP] [GO:0030336
"negative regulation of cell migration" evidence=IMP;IDA]
[GO:0048754 "branching morphogenesis of an epithelial tube"
evidence=IDA;IMP] [GO:0010593 "negative regulation of lamellipodium
assembly" evidence=IDA] [GO:0005095 "GTPase inhibitor activity"
evidence=IDA] [GO:0051058 "negative regulation of small GTPase
mediated signal transduction" evidence=IDA] [GO:0016020 "membrane"
evidence=NAS] [GO:0010596 "negative regulation of endothelial cell
migration" evidence=IDA] [GO:0043116 "negative regulation of
vascular permeability" evidence=IDA] [GO:0005509 "calcium ion
binding" evidence=NAS] [GO:0090024 "negative regulation of
neutrophil chemotaxis" evidence=IDA] [GO:0030837 "negative
regulation of actin filament polymerization" evidence=IDA]
[GO:0001933 "negative regulation of protein phosphorylation"
evidence=IDA] [GO:0002689 "negative regulation of leukocyte
chemotaxis" evidence=IDA] [GO:0043394 "proteoglycan binding"
evidence=IPI] [GO:0048846 "axon extension involved in axon
guidance" evidence=IDA] [GO:0071504 "cellular response to heparin"
evidence=IDA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IMP] [GO:0090260 "negative regulation of retinal
ganglion cell axon guidance" evidence=IDA] [GO:0061364 "apoptotic
process involved in luteolysis" evidence=IEP] [GO:0032870 "cellular
response to hormone stimulus" evidence=IEP] [GO:0051414 "response
to cortisol stimulus" evidence=IEP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0008045 "motor neuron axon guidance"
evidence=IDA] [GO:0021836 "chemorepulsion involved in postnatal
olfactory bulb interneuron migration" evidence=IDA] [GO:0008201
"heparin binding" evidence=IDA] [GO:0007411 "axon guidance"
evidence=IDA;TAS] [GO:0021834 "chemorepulsion involved in embryonic
olfactory bulb interneuron precursor migration" evidence=IDA]
[GO:0005576 "extracellular region" evidence=TAS] [GO:0005886
"plasma membrane" evidence=TAS] [GO:0035385 "Roundabout signaling
pathway" evidence=IC;IMP] [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IMP] [GO:0030308
"negative regulation of cell growth" evidence=IMP] [GO:0090027
"negative regulation of monocyte chemotaxis" evidence=ISS]
[GO:0014912 "negative regulation of smooth muscle cell migration"
evidence=IDA] [GO:0002042 "cell migration involved in sprouting
angiogenesis" evidence=IMP] [GO:0071672 "negative regulation of
smooth muscle cell chemotaxis" evidence=IDA] [GO:0071676 "negative
regulation of mononuclear cell migration" evidence=IDA] [GO:0090288
"negative regulation of cellular response to growth factor
stimulus" evidence=IDA] [GO:0021972 "corticospinal neuron axon
guidance through spinal cord" evidence=IMP] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005886 GO:GO:0005737 Reactome:REACT_111045 GO:GO:0008285
GO:GO:0005615 GO:GO:0042803 GO:GO:0009986 GO:GO:0030308
GO:GO:0001701 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0008201
Pathway_Interaction_DB:glypican_1pathway GO:GO:0005509
GO:GO:0043116 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0043065 GO:GO:0008045 GO:GO:0071504
GO:GO:0050772 GO:GO:0005095 Reactome:REACT_96538 GO:GO:0016337
PROSITE:PS01186 GO:GO:0032870 GO:GO:0030837 GO:GO:0010629
InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 GO:GO:0071672 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 EMBL:CH471069 GO:GO:0001656
GO:GO:0010596 GO:GO:0001657 GO:GO:0001933 GO:GO:0048754
GO:GO:0071676 GO:GO:0031290 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
GO:GO:0060763 GO:GO:0070100 GO:GO:0090288 GO:GO:0043237
GO:GO:0033563 GO:GO:0045499 GO:GO:0002042 Pfam:PF01463
GO:GO:0090027 GO:GO:0010593 GO:GO:0051414 GO:GO:0090260 PDB:2V9T
PDBsum:2V9T GO:GO:0021836 GO:GO:0035385 GO:GO:0061364
HOGENOM:HOG000116120 HOVERGEN:HBG057959 EMBL:AB017168 EMBL:AF055585
EMBL:AF133270 EMBL:BC117190 EMBL:BC143978 IPI:IPI00006288
IPI:IPI00220114 IPI:IPI00335003 RefSeq:NP_004778.1 UniGene:Hs.29802
PDB:2V70 PDB:2V9S PDB:2WFH PDBsum:2V70 PDBsum:2V9S PDBsum:2WFH
ProteinModelPortal:O94813 SMR:O94813 DIP:DIP-38198N IntAct:O94813
MINT:MINT-6768470 STRING:O94813 PhosphoSite:O94813 PaxDb:O94813
PRIDE:O94813 Ensembl:ENST00000503823 Ensembl:ENST00000503837
Ensembl:ENST00000504154 GeneID:9353 KEGG:hsa:9353 UCSC:uc003gpr.1
UCSC:uc003gps.1 CTD:9353 GeneCards:GC04P020254 HGNC:HGNC:11086
HPA:CAB007590 HPA:HPA019511 HPA:HPA023088 MIM:603746
neXtProt:NX_O94813 PharmGKB:PA35939 InParanoid:O94813 KO:K06839
PhylomeDB:O94813 EvolutionaryTrace:O94813 GenomeRNAi:9353
NextBio:35025 ArrayExpress:O94813 Bgee:O94813 CleanEx:HS_SLIT2
Genevestigator:O94813 GermOnline:ENSG00000145147 GO:GO:0021972
GO:GO:0050929 GO:GO:0090024 GO:GO:0051058 Uniprot:O94813
Length = 1529
Score = 183 (69.5 bits), Expect = 1.6e-10, Sum P(3) = 1.6e-10
Identities = 64/246 (26%), Positives = 107/246 (43%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQYLS 106
C+ C++G +CI C C G+ G+ C+ +L + V N SYL+ +
Sbjct: 1125 CDNFDCQNGAQCIVRINEPICQCLPGYQGEKCE-KL-VSVNFINKESYLQIPSA--KVRP 1180
Query: 107 LLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTG-AATLRSSNPI 165
++T+ E +GILLY G + D IA+ L V ++D G+ A+ + S I
Sbjct: 1181 QTNITLQIATDEDSGILLYKGDK-----DHIAVELYRGRVRASYDTGSHPASAIYSVETI 1235
Query: 166 SLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDY-NIVSPKV 224
+ G +H + L + L VD I + + GG+P N+ S +
Sbjct: 1236 NDGNFHIVELLALDQSLSLSVDGGNPKIITNLSKQSTLNFDSPLYVGGMPGKSNVASLRQ 1295
Query: 225 ---KIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNCAHPCITQPCGSGSCVPLYD-GY 280
+ +SF GCI+ + IN+ EL + ++ PC + C G+C P G+
Sbjct: 1296 APGQNGTSFHGCIRNLYINS-ELQDFQKVPMQTGILPGCEPCHKKVCAHGTCQPSSQAGF 1354
Query: 281 KCVCTQ 286
C C +
Sbjct: 1355 TCECQE 1360
Score = 106 (42.4 bits), Expect = 4.2e-05, Sum P(3) = 4.2e-05
Identities = 21/65 (32%), Positives = 30/65 (46%)
Query: 26 WIQLNDGNKIKGRSKECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQ 85
W DG +G + E D C CE+ C+ + CLCP +TG+LC+ +LD
Sbjct: 983 WCICADG--FEGENCEVNVDDCEDNDCENNSTCVDGINNYTCLCPPEYTGELCEEKLDFC 1040
Query: 86 VPQFN 90
N
Sbjct: 1041 AQDLN 1045
Score = 74 (31.1 bits), Expect = 4.2e-05, Sum P(3) = 4.2e-05
Identities = 23/96 (23%), Positives = 42/96 (43%)
Query: 340 NIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGV 399
NI ++I T SG++L+ G KD +A+ ++ G Y IN+G
Sbjct: 1183 NITLQIATDEDSGILLYKGD---KDHIAVELYRGRVRASYDTGSHPASAIYSVETINDGN 1239
Query: 400 WH---RLTVHRNFMVVMHGSSH---TRSNKSSKIEF 429
+H L + ++ + + G + T +K S + F
Sbjct: 1240 FHIVELLALDQSLSLSVDGGNPKIITNLSKQSTLNF 1275
Score = 70 (29.7 bits), Expect = 0.00010, Sum P(3) = 0.00010
Identities = 30/104 (28%), Positives = 47/104 (45%)
Query: 445 LIRIDTDYSMQSISGG---------KFEQLNTDSGLYVGGV---EDIEELTRSKYHH--S 490
L+ +D S+ S+ GG K LN DS LYVGG+ ++ L ++ + S
Sbjct: 1245 LLALDQSLSL-SVDGGNPKIITNLSKQSTLNFDSPLYVGGMPGKSNVASLRQAPGQNGTS 1303
Query: 491 FKGWISNLILSNDYQ--VKLPLSRSQGSSCQLTCETLNTGQVTC 532
F G I NL ++++ Q K+P+ C+ C TC
Sbjct: 1304 FHGCIRNLYINSELQDFQKVPMQTGILPGCE-PCHKKVCAHGTC 1346
Score = 57 (25.1 bits), Expect = 1.6e-10, Sum P(3) = 1.6e-10
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 262 PCITQPCGSGSCVPLYD-GYKCVCTQ 286
PC+ C G+C+P+ Y C C +
Sbjct: 1374 PCLGNKCVHGTCLPINAFSYSCKCLE 1399
Score = 51 (23.0 bits), Expect = 4.2e-05, Sum P(3) = 4.2e-05
Identities = 8/25 (32%), Positives = 13/25 (52%)
Query: 263 CITQPCGSGS-CVPLYDGYKCVCTQ 286
C C +G+ C +GY C+C +
Sbjct: 1080 CQDNKCKNGAHCTDAVNGYTCICPE 1104
Score = 46 (21.3 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 10/27 (37%), Positives = 12/27 (44%)
Query: 267 PCGSGS-CVPLYDGYKCVCTQSCKESH 292
PC S C+ G+KC CT H
Sbjct: 1046 PCQHDSKCILTPKGFKCDCTPGYVGEH 1072
Score = 40 (19.1 bits), Expect = 1.6e-10, Sum P(3) = 1.6e-10
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 34 KIKGRSKECLEDKCNKTPCEH 54
+ +G + +C K NK P EH
Sbjct: 511 RCEGTTVDCSNQKLNKIP-EH 530
>ZFIN|ZDB-GENE-050208-382 [details] [associations]
symbol:crb1 "crumbs homolog 1 (Drosophila)"
species:7955 "Danio rerio" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0043234 "protein complex" evidence=IPI]
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 SMART:SM00179
SMART:SM00181 InterPro:IPR000152 ZFIN:ZDB-GENE-050208-382
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 Pfam:PF02210 Pfam:PF12661
HOVERGEN:HBG080001 OMA:QYIRVWL GeneTree:ENSGT00690000101660
EMBL:CR388178 IPI:IPI00650789 UniGene:Dr.17713
Ensembl:ENSDART00000089774 Ensembl:ENSDART00000141006
Uniprot:Q1L927
Length = 1428
Score = 185 (70.2 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 81/287 (28%), Positives = 125/287 (43%)
Query: 31 DGNKIKGRSKECLEDK--CNKTPCEHGGKCIT--TPG-SSY-CLCPLGFTGDLCQTRLDL 84
DG GR+ C E C C++G CI + G Y C+C G+TG CQT L
Sbjct: 440 DGVLYGGRN--CSEPLTGCEGHECQNGASCIPFLSEGVHGYSCICQPGYTGSYCQT---L 494
Query: 85 QVPQFNGS-SYLRYQG--LGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYL 141
V F S ++L Q LG + + ++T+ F+ + N +L G + GV + +
Sbjct: 495 TVFSFETSRAFLHLQTPLLGAE--TYFNITLSFRTVLENTVLFQRG--SGGVTLSLEIQE 550
Query: 142 NDRYVDFTFDLGTGAA--TLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGP 199
+D D A TL +S GEWH + LQ+ P + G
Sbjct: 551 THLILDLKTDPQPNATSWTLMLPQVVSDGEWHTVEAVLGEGTLLLQLLE-PCQGGQNCGT 609
Query: 200 FTQXXXXXXXXXGGVPDYNIVSPKVKIKS-SFIGCIQKVLINNHELNILGEAIQG--VNV 256
Q + + S SFIGC++ +L+++ +L I + + VNV
Sbjct: 610 TAQVKIGALELESALLSTFVGGLDEGGSSRSFIGCMRDLLVDS-QLMIPEDWLSSSAVNV 668
Query: 257 VN-CAHP--CITQPCGS-GSCVPLYDGYKCVCT-----QSCKESHLT 294
V C+H C++ PC + G CV L+ GY+C C Q+C E ++T
Sbjct: 669 VQGCSHHDRCLSGPCENHGECVNLWQGYQCKCLRPYVGQNCDEEYIT 715
Score = 124 (48.7 bits), Expect = 0.00069, P = 0.00069
Identities = 59/285 (20%), Positives = 105/285 (36%)
Query: 26 WIQLNDGNKIKGRSKECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTR-LDL 84
W+ + N ++G S D+C PCE+ G+C+ C C + G C +
Sbjct: 660 WLSSSAVNVVQGCSHH---DRCLSGPCENHGECVNLWQGYQCKCLRPYVGQNCDEEYITA 716
Query: 85 QVPQFNGSSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDR 144
+ Q + +SY + E L L++ + + +G+L+ A+ D++ ++L
Sbjct: 717 RFAQQDSTSYAVFTINDEPDSETLHLSMFLRTRKDSGLLVL---LANSTSDYLQMWLEKG 773
Query: 145 YVDFTFDLGTGAATLRSSNPISLGEWHKLRLT-RTGRHAYLQVDRFPSSQILSPGPFTQX 203
+ T + T+ ++ GE H + +T G D + + P
Sbjct: 774 KL--TVQVNN-LKTVTGERVLNDGERHFVSVTIEDGMMTLQDSDHEFEATYVQP---VSI 827
Query: 204 XXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVN-----VVN 258
GG+ D V F GC+Q + +N +L ++ VV
Sbjct: 828 QFGDTINVGGLFD---VQALTAFGGHFKGCLQDLQLNEKKLEFFPIDTSAMSYKPDRVVK 884
Query: 259 ----CAHP--CITQPCGSGS-CVPLYDGYKCVCTQSCKESHLTEV 296
C C PC +G C +D + C C + H EV
Sbjct: 885 VTAGCTSDDTCSKNPCQNGGICFSSWDDFTCNCPPNTSGQHCEEV 929
Score = 110 (43.8 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 46/197 (23%), Positives = 86/197 (43%)
Query: 229 SFIGCIQKVLINNHELNILGEAIQG--VNVVN-CAHP--CITQPCGS-GSCVPLYDGYKC 282
SFIGC++ +L+++ +L I + + VNVV C+H C++ PC + G CV L+ GY+C
Sbjct: 640 SFIGCMRDLLVDS-QLMIPEDWLSSSAVNVVQGCSHHDRCLSGPCENHGECVNLWQGYQC 698
Query: 283 VCTQSCKESHLTEVMCASFDHGASFLHYLDPEIIHSSGLLHYKFQLHVDFRITGYEFNID 342
C + + E Y+ + F ++ + ++
Sbjct: 699 KCLRPYVGQNCDE-------------EYITARFAQQDSTSYAVFTINDE--PDSETLHLS 743
Query: 343 MRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGVWHR 402
M ++T SGL++ +S S D+L + + G V + +N+G H
Sbjct: 744 MFLRTRKDSGLLVLLANSTS-DYLQMWLEKGKLTVQVNNLKTVTG----ERVLNDGERHF 798
Query: 403 LTVH-RNFMVVMHGSSH 418
++V + M+ + S H
Sbjct: 799 VSVTIEDGMMTLQDSDH 815
Score = 90 (36.7 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 17/47 (36%), Positives = 21/47 (44%)
Query: 37 GRSKECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLD 83
G S E D+C PC HG C C C GF G+ C+ +D
Sbjct: 228 GSSCELEIDECQSQPCLHGASCHDHINGFTCTCLAGFQGESCEINID 274
Score = 88 (36.0 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 18/60 (30%), Positives = 29/60 (48%)
Query: 36 KGRSKECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLD--LQVPQFNGSS 93
+G+ E ++C PC +G C+ G CLC G+ G C+ +D P +G+S
Sbjct: 189 QGQLCEIEVNECVSRPCRNGATCVDKIGHYICLCRPGYMGSSCELEIDECQSQPCLHGAS 248
Score = 84 (34.6 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 20/59 (33%), Positives = 28/59 (47%)
Query: 37 GRSKECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQV--PQFNGSS 93
GRS E D C+ PC + C + C C GF G LC+ ++ V P NG++
Sbjct: 152 GRSCEKEVDHCSPNPCRNRAICRSRRNGPTCFCVPGFQGQLCEIEVNECVSRPCRNGAT 210
Score = 83 (34.3 bits), Expect = 0.00095, Sum P(2) = 0.00095
Identities = 20/64 (31%), Positives = 28/64 (43%)
Query: 258 NCAHP---CITQPCGSG-SCVPLYD----GYKCVCTQSCKESHLTEVMCASFDHGASFLH 309
NC+ P C C +G SC+P GY C+C S+ + SF+ +FLH
Sbjct: 448 NCSEPLTGCEGHECQNGASCIPFLSEGVHGYSCICQPGYTGSYCQTLTVFSFETSRAFLH 507
Query: 310 YLDP 313
P
Sbjct: 508 LQTP 511
Score = 72 (30.4 bits), Expect = 9.6e-05, Sum P(2) = 9.6e-05
Identities = 16/46 (34%), Positives = 22/46 (47%)
Query: 36 KGRSKECLEDKCNKTPCEHGGKCITTPGSSYCLCP--LGFTGDLCQ 79
+G S E D+C PC++G C+ S C C FTG C+
Sbjct: 265 QGESCEINIDECRDQPCQNGALCVDEINSYRCDCSQTANFTGVDCE 310
Score = 64 (27.6 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCP 70
C +PC +G C GS C+CP
Sbjct: 412 CTTSPCHNGATCEDFLGSYKCICP 435
Score = 62 (26.9 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 14/50 (28%), Positives = 24/50 (48%)
Query: 40 KECLEDK--CNKTPCEHGGKCIT----TPGSSYCLCPLGFTGDLCQTRLD 83
++CL C + C C+ +PG + C+C G+TG C+ +D
Sbjct: 112 QDCLSSAQLCAQGHCGDSAHCLAVRDQSPGYA-CICQEGYTGRSCEKEVD 160
>UNIPROTKB|G5E5W4 [details] [associations]
symbol:CNTNAP4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0030425 "dendrite" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] InterPro:IPR000421 InterPro:IPR000742
Pfam:PF00754 PROSITE:PS01285 PROSITE:PS01286 PROSITE:PS50022
PROSITE:PS50026 SMART:SM00181 SMART:SM00231 INTERPRO:IPR002181
GO:GO:0007165 GO:GO:0030425 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
InterPro:IPR008979 SUPFAM:SSF49785 InterPro:IPR001791 SMART:SM00282
PROSITE:PS50025 Gene3D:3.90.215.10 InterPro:IPR014716 SMART:SM00186
SUPFAM:SSF56496 PROSITE:PS51406 Pfam:PF02210
GeneTree:ENSGT00560000076804 OMA:CMRLISI EMBL:DAAA02046016
EMBL:DAAA02046017 EMBL:DAAA02046018 EMBL:DAAA02046019
EMBL:DAAA02046020 EMBL:DAAA02046021 EMBL:DAAA02046022
EMBL:DAAA02046023 EMBL:DAAA02046024 EMBL:DAAA02046025
Ensembl:ENSBTAT00000036878 Uniprot:G5E5W4
Length = 1291
Score = 183 (69.5 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 86/328 (26%), Positives = 140/328 (42%)
Query: 64 SSYCLCPLGFTGDLCQTRLDLQVPQFNG-SSYLRYQGL-GEQYLSLLDLTIVFKAIEPNG 121
++Y L PL GD +L FN +SYL + GE LS D++ FK +G
Sbjct: 759 AAYKLGPLLCRGD----KLFWNSASFNTEASYLHFPTFHGE--LSA-DVSFFFKTTASSG 811
Query: 122 ILLYNGHRADGVGDFIALYLND-RYVDFTFDLGTGAATLRSSNP--ISLGEWHKLRLTRT 178
+ L N G+ DFI + L V F+FD+G G + +P S +WH +R+ R
Sbjct: 812 VFLENL----GITDFIRIELRSPAVVTFSFDVGNGPFEISVQSPTHFSDNQWHHVRVERN 867
Query: 179 GRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVL 238
+ A ++VD+ LSP TQ + V + F+GCI+ +
Sbjct: 868 MKEASVRVDQ------LSPK--TQPAPADGHVLLQLNSQLFVGGTATRQRGFLGCIRSLQ 919
Query: 239 INNHELNILGEA--IQGVNVVNCAHPCIT--QPCGSGS-CVPLYDGYKCVCTQSCKESHL 293
+N L++ A GV C C + + C G C+ G+ C CT S
Sbjct: 920 LNGEALDLEERARVTPGVEP-GCRGHCSSYGRLCHHGGMCMEKPSGFSCDCTSSAYAGPF 978
Query: 294 -TEVMCASFDHGASFLHYLDPEIIHSSGLLHYKFQLHVDFRITGYEFNIDMRIKTSSSSG 352
++ + A F G+S ++ S + H D R++ I +T+ +
Sbjct: 979 CSDEISAYFGSGSSVIYNFQENYSLSKNSSSHAASFHGDTRLS--RETIKFSFRTTRTPS 1036
Query: 353 LILWTGSSQSKDFLALGI-HNGYAHVMY 379
L+L+ SS K++L++ + NG + Y
Sbjct: 1037 LLLYL-SSFYKEYLSVILAKNGSLQIRY 1063
>RGD|1308889 [details] [associations]
symbol:Lama2 "laminin, alpha 2" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005102 "receptor binding" evidence=IEA] [GO:0005604 "basement
membrane" evidence=ISO] [GO:0005605 "basal lamina"
evidence=ISO;IDA] [GO:0005606 "laminin-1 complex" evidence=IEA]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0007411 "axon
guidance" evidence=ISO] [GO:0022011 "myelination in peripheral
nervous system" evidence=IEP] [GO:0030155 "regulation of cell
adhesion" evidence=IEA] [GO:0030198 "extracellular matrix
organization" evidence=IEP] [GO:0030334 "regulation of cell
migration" evidence=IEA] [GO:0032224 "positive regulation of
synaptic transmission, cholinergic" evidence=ISO] [GO:0042383
"sarcolemma" evidence=ISO] [GO:0043197 "dendritic spine"
evidence=IDA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 RGD:1308889 GO:GO:0007411 GO:GO:0030155 GO:GO:0043197
GO:GO:0030198 GO:GO:0007155 GO:GO:0042383 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
GO:GO:0005605 GO:GO:0022011 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 Pfam:PF00054 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 Pfam:PF02210
GO:GO:0045995 GO:GO:0032224 GeneTree:ENSGT00700000104140
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606 IPI:IPI00361301
PRIDE:F1M614 Ensembl:ENSRNOT00000014917 ArrayExpress:F1M614
Uniprot:F1M614
Length = 3085
Score = 130 (50.8 bits), Expect = 2.6e-10, Sum P(3) = 2.6e-10
Identities = 44/171 (25%), Positives = 79/171 (46%)
Query: 88 QFNGSSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVD 147
QF+G Y Y ++ + F+ N +L+Y R + DF+++ L+D +V
Sbjct: 2305 QFDGEGYALVSRPIRWYPNISTVMFKFRTFSSNALLMYLATR--DLKDFMSVELSDGHVK 2362
Query: 148 FTFDLGTGAATLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQ-----ILSPGP-F- 200
++DLG+G A++ S+ + G+W L+R + A + + S+Q S G F
Sbjct: 2363 VSYDLGSGMASVVSNQNHNDGKWKSFTLSRIQKQANISIVDIDSNQEENIATSSSGNNFG 2422
Query: 201 TQXXXXXXXXXGGVPDYNIVS----PKVKIKSSFIGCIQKVLINNHELNIL 247
GG+P +S P+V +K + GC++ + I+ NIL
Sbjct: 2423 LDLKADDKIYFGGLPTLRNLSMKARPEVNVKK-YSGCLKDIEISRTPYNIL 2472
Score = 126 (49.4 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 36/141 (25%), Positives = 67/141 (47%)
Query: 120 NGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSNPISLGEWHKLRLTRTG 179
+G+L Y R + DF + L + + F++DLG+G + I+ G+WHK+++TR
Sbjct: 2762 SGLLFYMA-RINHA-DFATVQLRNGFPYFSYDLGSGDTSTMIPTRINDGQWHKIKITRVK 2819
Query: 180 RHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSPKV-KIKSSFIGCIQKVL 238
+ L VD S+Q +SP GG+P N + ++ + S GC++ +
Sbjct: 2820 QEGILSVDD-ASNQTISPKKADILDVVGILYVGGLP-INYTTRRIGPVTYSLDGCVRNLY 2877
Query: 239 INNHELNILGEAIQGVNVVNC 259
+ ++ L + +V C
Sbjct: 2878 MEQAPVD-LDQPTSSFHVGTC 2897
Score = 100 (40.3 bits), Expect = 2.6e-10, Sum P(3) = 2.6e-10
Identities = 23/91 (25%), Positives = 42/91 (46%)
Query: 341 IDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGVW 400
I++ ++T + SGL+ + DF + + NG+ + Y T+IN+G W
Sbjct: 2752 IELEVRTEAESGLLFYMARINHADFATVQLRNGFPYFSYDLGSGDTSTMI-PTRINDGQW 2810
Query: 401 HRLTVHR----NFMVVMHGSSHTRSNKSSKI 427
H++ + R + V S+ T S K + I
Sbjct: 2811 HKIKITRVKQEGILSVDDASNQTISPKKADI 2841
Score = 82 (33.9 bits), Expect = 5.1e-05, Sum P(4) = 5.1e-05
Identities = 32/150 (21%), Positives = 66/150 (44%)
Query: 109 DLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSN-PISL 167
++ + K + +L Y G A + DF+A+ + V F +D+G+G + + I
Sbjct: 2132 NIVVHVKTAVADNLLFYLGS-AKFI-DFLAIEMRKGKVSFLWDVGSGVGRVEYPDLTIDD 2189
Query: 168 GEWHKLRLTRTGRHAYLQV--------DRFPSSQ-ILSPGPFT--QXXXXXXXXXGGVPD 216
W+++ +RTGR+ + V PS+ +SP +T GG+
Sbjct: 2190 SYWYRIEASRTGRNGSISVRALDGPKASMVPSTHHSVSPPGYTILDVDANAMLFVGGLTG 2249
Query: 217 YNIVSPKVKIKSSFIGCIQKVLINNHELNI 246
+ V++ ++F GC+ + +N + +
Sbjct: 2250 KIKKADAVRV-TTFTGCMGETYFDNKPIGL 2278
Score = 80 (33.2 bits), Expect = 5.1e-05, Sum P(4) = 5.1e-05
Identities = 24/102 (23%), Positives = 46/102 (45%)
Query: 311 LDPEIIHSSGLLHYKFQLH--VDFRITGYEFNID---MRIKTSSSSGLILWTGSSQSKDF 365
+ P++ S G + + + + V I Y NI + +T SS+ L+++ + KDF
Sbjct: 2293 VSPQVEDSEGTIQFDGEGYALVSRPIRWYP-NISTVMFKFRTFSSNALLMYLATRDLKDF 2351
Query: 366 LALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGVWHRLTVHR 407
+++ + +G+ V Y Q N+G W T+ R
Sbjct: 2352 MSVELSDGHVKVSYDLGSGMASVVSNQNH-NDGKWKSFTLSR 2392
Score = 62 (26.9 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 25/91 (27%), Positives = 41/91 (45%)
Query: 436 RLHRTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVEDIEELTR--SKYHHSFKG 493
++ R ++ ++ +D D S Q+IS K + L+ LYVGG+ I TR +S G
Sbjct: 2814 KITRVKQEGILSVD-DASNQTISPKKADILDVVGILYVGGLP-INYTTRRIGPVTYSLDG 2871
Query: 494 WISNLILSN-DYQVKLPLSRSQGSSCQLTCE 523
+ NL + + P S +C E
Sbjct: 2872 CVRNLYMEQAPVDLDQPTSSFHVGTCFANAE 2902
Score = 61 (26.5 bits), Expect = 2.6e-10, Sum P(3) = 2.6e-10
Identities = 12/36 (33%), Positives = 15/36 (41%)
Query: 44 EDKCNKTPCEH-GGKCITTPGSSYCLCPLGFTGDLC 78
E C C H G C P + C+CP G+ C
Sbjct: 971 EGGCTACDCSHLGNNC--NPKTGQCICPPNTIGEKC 1004
Score = 47 (21.6 bits), Expect = 6.7e-09, Sum P(3) = 6.7e-09
Identities = 14/52 (26%), Positives = 23/52 (44%)
Query: 32 GNKIKGRSKECLEDKCN-KTPCEH-GGKC-ITTPGSSYC-LCPLGFTGDLCQ 79
G+ +G S++C C P + C + C CP+G+TG C+
Sbjct: 757 GDPTRGTSEDCQPCACPLNIPSNNFSPTCHLDRSLGLICDECPVGYTGPRCE 808
Score = 45 (20.9 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 6/13 (46%), Positives = 9/13 (69%)
Query: 67 CLCPLGFTGDLCQ 79
C CP G++G C+
Sbjct: 687 CQCPPGYSGSSCE 699
Score = 45 (20.9 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 11/37 (29%), Positives = 12/37 (32%)
Query: 42 CLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLC 78
C+ CN G K S C C G G C
Sbjct: 927 CIPCNCNS----FGSKSFDCEASGQCWCQPGVAGKKC 959
Score = 44 (20.5 bits), Expect = 1.3e-08, Sum P(3) = 1.3e-08
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 67 CLCPLGFTGDLCQT 80
C CP G++G C+T
Sbjct: 1343 CDCPPGYSGLSCET 1356
Score = 44 (20.5 bits), Expect = 1.3e-08, Sum P(3) = 1.3e-08
Identities = 12/49 (24%), Positives = 20/49 (40%)
Query: 35 IKGRSKECLEDKCNK-TPCEH-GGKCITTPGSSY-CL-CPLGFTGDLCQ 79
++G +C C +P + C+ Y C CP G+ G C+
Sbjct: 1422 VRGLPNDCQPCACPLISPSNNFSPSCVLEGLEDYRCTACPRGYEGQYCE 1470
Score = 41 (19.5 bits), Expect = 2.7e-08, Sum P(3) = 2.7e-08
Identities = 10/34 (29%), Positives = 15/34 (44%)
Query: 47 CNKTPCE-HGGKCITT-PGSSYCLCPLGFTGDLC 78
C + C+ +G + P + C C G TG C
Sbjct: 1487 CQECECDPYGSLPVPCDPVTGLCTCRPGATGRKC 1520
>UNIPROTKB|F1S1H0 [details] [associations]
symbol:CNTNAP1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050885 "neuromuscular process controlling balance"
evidence=IEA] [GO:0050884 "neuromuscular process controlling
posture" evidence=IEA] [GO:0048812 "neuron projection
morphogenesis" evidence=IEA] [GO:0033270 "paranode region of axon"
evidence=IEA] [GO:0030913 "paranodal junction assembly"
evidence=IEA] [GO:0008088 "axon cargo transport" evidence=IEA]
[GO:0008076 "voltage-gated potassium channel complex" evidence=IEA]
[GO:0007010 "cytoskeleton organization" evidence=IEA] [GO:0002175
"protein localization to paranode region of axon" evidence=IEA]
InterPro:IPR000742 PROSITE:PS50026 GO:GO:0007010 GO:GO:0008088
GO:GO:0050885 GO:GO:0048812 GO:GO:0008076 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025 GO:GO:0033270
Pfam:PF02210 InterPro:IPR003585 SMART:SM00294 GO:GO:0030913
GO:GO:0002175 GO:GO:0050884 GeneTree:ENSGT00560000076804
OMA:RHERTVI EMBL:CU928483 Ensembl:ENSSSCT00000018920 Uniprot:F1S1H0
Length = 585
Score = 178 (67.7 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 89/370 (24%), Positives = 149/370 (40%)
Query: 64 SSYCLCPLGFTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQYLSLLDLTIVFKAIEPNGIL 123
+ + L PL GD R F+ + LR+ + + LD++ F+ P+G+
Sbjct: 64 AQFFLRPLRCYGD----RNSWNTISFHTGAALRFPPIRANHS--LDVSFYFRTSAPSGVF 117
Query: 124 LYN--GHRADGVGDFIALYLN-DRYVDFTFDLGTGAATLR-SSNPISLG--EWHKLRLTR 177
L N G ++ + LN R V F FD+G G L S+ EWH +R
Sbjct: 118 LENMGGPHCQWRRPYVRVELNTSRDVVFAFDVGNGDENLTVHSDDFEFNDDEWHLVRAEI 177
Query: 178 TGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKV 237
+ A L+VD P +L P P P Y + S ++K + FIGC++ +
Sbjct: 178 NVKQARLRVDHRP--WVLRPMPLQTYIWLEYDR----PLY-VGSAELK-RRPFIGCLRAM 229
Query: 238 LINNHELNILGEA--IQGVN---VVNCAHPCITQPC-GSGSCVPLYDGYKCVCTQSCKES 291
+N LN+ G A +G + +CAHP PC G CV Y Y C C + +
Sbjct: 230 RLNGVTLNLEGRANASEGTSPNCTGHCAHPRF--PCFHGGRCVERYSYYTCDCELTAFDG 287
Query: 292 HLTEVMCASFDHGASFLHY-LDPEIIHSSGLLHYKFQLHVDFR-----ITGYEFNIDMRI 345
F +++ Y L + ++ + +R +TG E +
Sbjct: 288 PYCNHDIGGFFEPGTWMRYNLQSALRSAAREFSHMLSRPPGYRGPVYNVTGEE--VSFSF 345
Query: 346 KTSSSSGLILWTGSSQSKDFLALGI-HNGYAHVMYXXXXXXXXXXXXQTKINNGVWHRLT 404
T S+ ++L+ SS +D++A+ I +G + Y + +G H +
Sbjct: 346 STHSAPAVLLYV-SSFVRDYMAVLIKEDGTLQLRYQLGTSPYVYQLTTRPVTDGQPHSVN 404
Query: 405 ---VHRNFMV 411
V+RN +
Sbjct: 405 ITRVYRNLFI 414
Score = 113 (44.8 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 34/138 (24%), Positives = 67/138 (48%)
Query: 109 DLTIVFKAIEPNGILLYNGHRADGVGDFIALYLN-DRYVDFTFDLGTGAATLR-SSNPIS 166
+++ F +LLY + V D++A+ + D + + LGT + ++ P++
Sbjct: 340 EVSFSFSTHSAPAVLLYV---SSFVRDYMAVLIKEDGTLQLRYQLGTSPYVYQLTTRPVT 396
Query: 167 LGEWHKLRLTRTGRHAYLQVDRFP-SSQILSPGPFTQXXXXXXXXXGGVPDYNIVSPKVK 225
G+ H + +TR R+ ++QVD FP + Q S +Q G V + ++ P+++
Sbjct: 397 DGQPHSVNITRVYRNLFIQVDYFPLTEQKFSLLVDSQLDSPKALYLGRVMETGVIDPEIQ 456
Query: 226 IKSS--FIGCIQKVLINN 241
++ F GC+ V NN
Sbjct: 457 RYNTPGFSGCLSGVRFNN 474
Score = 68 (29.0 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 16/48 (33%), Positives = 21/48 (43%)
Query: 33 NKIKGRSKECLEDKCN-KTPCEHGGKCITTPGSSYCLCPL-GFTGDLC 78
N +G S C + + PC HGG+C+ C C L F G C
Sbjct: 243 NASEGTSPNCTGHCAHPRFPCFHGGRCVERYSYYTCDCELTAFDGPYC 290
>MGI|MGI:1858235 [details] [associations]
symbol:Celsr2 "cadherin, EGF LAG seven-pass G-type receptor
2 (flamingo homolog, Drosophila)" species:10090 "Mus musculus"
[GO:0001764 "neuron migration" evidence=IMP] [GO:0003341 "cilium
movement" evidence=IMP] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0004888 "transmembrane signaling receptor
activity" evidence=IEA] [GO:0004930 "G-protein coupled receptor
activity" evidence=IEA] [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005886
"plasma membrane" evidence=ISO;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0007156 "homophilic cell adhesion"
evidence=IDA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0007166 "cell surface receptor signaling pathway" evidence=IEA]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0007218 "neuropeptide signaling pathway"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016055 "Wnt receptor
signaling pathway" evidence=IDA] [GO:0021591 "ventricular system
development" evidence=IMP] [GO:0021999 "neural plate
anterior/posterior regionalization" evidence=IDA] [GO:0022407
"regulation of cell-cell adhesion" evidence=ISO] [GO:0032880
"regulation of protein localization" evidence=IGI;IMP] [GO:0033326
"cerebrospinal fluid secretion" evidence=IGI] [GO:0042384 "cilium
assembly" evidence=IGI;IMP] [GO:0048813 "dendrite morphogenesis"
evidence=ISO] InterPro:IPR000203 InterPro:IPR000742
InterPro:IPR000832 InterPro:IPR001368 InterPro:IPR001879
InterPro:IPR002126 InterPro:IPR015919 InterPro:IPR017981
InterPro:IPR020894 Pfam:PF00002 Pfam:PF00008 Pfam:PF00028
Pfam:PF01825 PRINTS:PR00205 PRINTS:PR00249 PROSITE:PS00232
PROSITE:PS00649 PROSITE:PS00650 PROSITE:PS50026 PROSITE:PS50221
PROSITE:PS50227 PROSITE:PS50261 PROSITE:PS50268 SMART:SM00008
SMART:SM00112 SMART:SM00181 SMART:SM00208 SMART:SM00303
InterPro:IPR000152 MGI:MGI:1858235 GO:GO:0016021 GO:GO:0005886
GO:GO:0005737 GO:GO:0001764 GO:GO:0006355 GO:GO:0016055
GO:GO:0004930 GO:GO:0007218 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186 eggNOG:NOG12793
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 SMART:SM00180
SMART:SM00282 PROSITE:PS00010 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 GO:GO:0007156 GO:GO:0021591 SUPFAM:SSF49313
InterPro:IPR022624 Pfam:PF12003 Gene3D:2.60.40.60 Pfam:PF02210
HOGENOM:HOG000231346 HOVERGEN:HBG050887 OrthoDB:EOG4KKZ23
GO:GO:0021999 EMBL:AB028499 EMBL:AF031573 EMBL:BC005499
IPI:IPI00313878 IPI:IPI00850704 UniGene:Mm.39728
ProteinModelPortal:Q9R0M0 SMR:Q9R0M0 STRING:Q9R0M0 MEROPS:S63.009
PhosphoSite:Q9R0M0 PaxDb:Q9R0M0 PRIDE:Q9R0M0 InParanoid:Q9R0M0
Genevestigator:Q9R0M0 GermOnline:ENSMUSG00000068740 Uniprot:Q9R0M0
Length = 2920
Score = 186 (70.5 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 71/265 (26%), Positives = 110/265 (41%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQ-FNGSSYLRYQGLGEQYL 105
C+ + C +GG C+ + C CPLGF G C ++ PQ F GSS + + GL
Sbjct: 1579 CDSSICHNGGTCVNQWNTFSCECPLGFGGKSCAQ--EMANPQRFLGSSLVAWHGLYLPIS 1636
Query: 106 SLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTG--AATLR-SS 162
L ++F+ + +G+LL R I L L +V + + GTG A++L
Sbjct: 1637 QPWHLNLMFRTRQADGVLLQAVTRGRST---ITLQLRAGHVRLSME-GTGLQASSLHLEP 1692
Query: 163 NPISLGEWHKLRL----TRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYN 218
+ G+WH +L +R HA L + + + GP GGVP
Sbjct: 1693 GRANDGDWHHAQLALGASRGPGHAILSFNYGQQTAEGNLGPRLHGLHLSNITVGGVP--- 1749
Query: 219 IVSPKVKIKSSFIGCIQKVLINN-----HELN-ILGEAIQGVNVVNCAHPCITQPCGSGS 272
P + F GC+Q V ++ H L+ GE+I + PC + PC + S
Sbjct: 1750 --GPASGVARGFRGCLQGVRVSETPEGVHSLDPSRGESINVEPGCSLPDPCDSNPCPTNS 1807
Query: 273 CVPL-YDGYKCVCTQSCKESHLTEV 296
++ Y C C + T V
Sbjct: 1808 YYSNDWNSYSCSCVLGYYGDNCTNV 1832
Score = 162 (62.1 bits), Expect = 9.8e-10, Sum P(2) = 9.8e-10
Identities = 43/134 (32%), Positives = 65/134 (48%)
Query: 46 KCNKTPCEHGGKCITT-PGSSYCLCPLG-FTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQ 103
+C C++GG C+ G C CP G F CQ + F ++ ++GL ++
Sbjct: 1332 RCTPGVCKNGGTCVNLLVGGIKCDCPSGHFEKPFCQ----VTTRSFPARPFITFRGLHQR 1387
Query: 104 YLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSN 163
+ L L+ K E NG+LLYNG R + DF+AL + V TF G T+
Sbjct: 1388 FHFTLALSFATK--ERNGLLLYNG-RFNEKHDFVALEVIQEQVQLTFSAGESTTTVSPFV 1444
Query: 164 P--ISLGEWHKLRL 175
P +S G+WH ++L
Sbjct: 1445 PGGVSDGQWHTVQL 1458
Score = 73 (30.8 bits), Expect = 9.8e-10, Sum P(2) = 9.8e-10
Identities = 19/77 (24%), Positives = 37/77 (48%)
Query: 212 GGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNCAHP---CITQPC 268
GGVPD P V+++ F+GC++ + +++ +++ V C C + C
Sbjct: 1527 GGVPDLPESFP-VRMRH-FVGCMKDLQVDSRHIDMADFIANNGTVPGCPTKKIVCDSSIC 1584
Query: 269 -GSGSCVPLYDGYKCVC 284
G+CV ++ + C C
Sbjct: 1585 HNGGTCVNQWNTFSCEC 1601
Score = 42 (19.8 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 12/31 (38%), Positives = 13/31 (41%)
Query: 258 NCAHPCITQPCGSGS-CV--P-LYDGYKCVC 284
NC + C PC S C P GY C C
Sbjct: 1828 NCTNVCDLNPCEHQSVCTRKPNTPHGYICEC 1858
>UNIPROTKB|F1NR92 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005576 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 Pfam:PF00054 SMART:SM00274 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR025875 Pfam:PF12799 InterPro:IPR006207
PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041 Pfam:PF01463
GeneTree:ENSGT00700000104083 EMBL:AADN02015249 EMBL:AADN02015250
EMBL:AADN02015251 EMBL:AADN02015252 EMBL:AADN02015253
EMBL:AADN02015254 EMBL:AADN02015255 EMBL:AADN02015256
EMBL:AADN02015257 EMBL:AADN02015258 EMBL:AADN02015259
EMBL:AADN02015260 EMBL:AADN02015261 EMBL:AADN02015262
EMBL:AADN02015263 EMBL:AADN02015264 EMBL:AADN02015265
EMBL:AADN02015266 EMBL:AADN02015267 EMBL:AADN02015268
EMBL:AADN02015269 EMBL:AADN02015270 EMBL:AADN02015271
IPI:IPI00813921 ProteinModelPortal:F1NR92
Ensembl:ENSGALT00000037317 ArrayExpress:F1NR92 Uniprot:F1NR92
Length = 1425
Score = 175 (66.7 bits), Expect = 3.7e-10, Sum P(3) = 3.7e-10
Identities = 61/245 (24%), Positives = 103/245 (42%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQYLS 106
C+ C++G +CI C C G+ G+ C+ + + N SYL+ + S
Sbjct: 1021 CDNYECQNGAQCIVKESEPICQCLSGYQGEKCEKLISINF--VNKESYLQIPSA--KIHS 1076
Query: 107 LLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGT-GAATLRSSNPI 165
++T+ E +GILLY G + D IA+ L V ++D G+ A+ + S I
Sbjct: 1077 QTNITLQIATDEDSGILLYKGDK-----DHIAVELYRGRVRVSYDTGSYPASAIYSVETI 1131
Query: 166 SLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIV----- 220
+ G +H + L + L +D I + + GG+P N +
Sbjct: 1132 NDGNFHIVELLAMDQILSLSIDGGSPKIITNLSKQSTLNFDSPLYVGGMPVKNNIAALRQ 1191
Query: 221 SPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNCAHPCITQPCGSGSC-VPLYDG 279
SP +SF GCI+ + IN+ + +Q V ++ PC + C G+C
Sbjct: 1192 SPGQN-GTSFHGCIRNLYINSELQDFRNVPLQ-VGILPGCEPCHKKVCVHGTCHATSQSS 1249
Query: 280 YKCVC 284
+ C C
Sbjct: 1250 FTCEC 1254
Score = 108 (43.1 bits), Expect = 5.9e-08, Sum P(4) = 5.9e-08
Identities = 21/65 (32%), Positives = 30/65 (46%)
Query: 26 WIQLNDGNKIKGRSKECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQ 85
W DG +G + E D C CE+ C+ + CLCP +TG+LC+ +LD
Sbjct: 879 WCTCADG--FEGENCEINVDDCEDNDCENNSTCVDGINNYTCLCPPEYTGELCEEKLDFC 936
Query: 86 VPQFN 90
N
Sbjct: 937 AQNLN 941
Score = 89 (36.4 bits), Expect = 5.7e-06, Sum P(4) = 5.7e-06
Identities = 17/41 (41%), Positives = 20/41 (48%)
Query: 45 DKC--NKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLD 83
D C N PC+H KCI TP C C G+ G+ C D
Sbjct: 934 DFCAQNLNPCQHDSKCILTPKGYKCDCTPGYVGEHCDIDFD 974
Score = 86 (35.3 bits), Expect = 1.2e-05, Sum P(4) = 1.2e-05
Identities = 17/51 (33%), Positives = 23/51 (45%)
Query: 36 KGRSKECLEDKCNKTPCEHGGKCITTPGSS---YCLCPLGFTGDLCQTRLD 83
KG+ + C PC HGG C G +C C GF G+ C+ +D
Sbjct: 846 KGQDCDIPIHACISNPCNHGGTCHLKEGEKDGFWCTCADGFEGENCEINVD 896
Score = 80 (33.2 bits), Expect = 0.00045, Sum P(3) = 0.00045
Identities = 12/44 (27%), Positives = 22/44 (50%)
Query: 45 DKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQ 88
D C C++G +C C+CP G++G C+ + +P+
Sbjct: 974 DDCQDNKCKNGAQCTDAVNGYTCICPEGYSGLFCEFSPPMVLPR 1017
Score = 79 (32.9 bits), Expect = 2.5e-05, Sum P(4) = 2.5e-05
Identities = 16/37 (43%), Positives = 18/37 (48%)
Query: 46 KCN---KTPCEHGGKCITTPGSSY-CLCPLGFTGDLC 78
KCN PC++ G C P Y C CP GF G C
Sbjct: 814 KCNPCLSNPCKNDGTCNNDPVDFYRCTCPYGFKGQDC 850
Score = 77 (32.2 bits), Expect = 5.9e-08, Sum P(4) = 5.9e-08
Identities = 18/62 (29%), Positives = 29/62 (46%)
Query: 340 NIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGV 399
NI ++I T SG++L+ G KD +A+ ++ G V Y IN+G
Sbjct: 1079 NITLQIATDEDSGILLYKGD---KDHIAVELYRGRVRVSYDTGSYPASAIYSVETINDGN 1135
Query: 400 WH 401
+H
Sbjct: 1136 FH 1137
Score = 64 (27.6 bits), Expect = 3.7e-10, Sum P(3) = 3.7e-10
Identities = 22/68 (32%), Positives = 27/68 (39%)
Query: 262 PCITQPCGSGSCVPLYD-GYKCVCTQS-----CKESHLTEVMCASF--DHGASFLHYLD- 312
PC+ C G+C+P+ Y C C Q C E + C S HG L L
Sbjct: 1270 PCLGNKCVHGTCLPINAFSYSCKCLQGHGGVLCDEEEMLFNPCQSIRCKHGKCRLSGLGK 1329
Query: 313 PEIIHSSG 320
P SSG
Sbjct: 1330 PYCECSSG 1337
Score = 64 (27.6 bits), Expect = 5.9e-08, Sum P(4) = 5.9e-08
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 461 KFEQLNTDSGLYVGGV---EDIEELTRSKYHH--SFKGWISNLILSNDYQ 505
K LN DS LYVGG+ +I L +S + SF G I NL ++++ Q
Sbjct: 1165 KQSTLNFDSPLYVGGMPVKNNIAALRQSPGQNGTSFHGCIRNLYINSELQ 1214
Score = 55 (24.4 bits), Expect = 2.5e-05, Sum P(4) = 2.5e-05
Identities = 11/28 (39%), Positives = 13/28 (46%)
Query: 261 HPCITQPCGSGSCVPLY----DGYKCVC 284
H CI+ PC G L DG+ C C
Sbjct: 855 HACISNPCNHGGTCHLKEGEKDGFWCTC 882
Score = 51 (23.0 bits), Expect = 5.9e-08, Sum P(4) = 5.9e-08
Identities = 8/25 (32%), Positives = 13/25 (52%)
Query: 263 CITQPCGSGS-CVPLYDGYKCVCTQ 286
C C +G+ C +GY C+C +
Sbjct: 976 CQDNKCKNGAQCTDAVNGYTCICPE 1000
Score = 50 (22.7 bits), Expect = 7.4e-08, Sum P(4) = 7.4e-08
Identities = 11/27 (40%), Positives = 12/27 (44%)
Query: 267 PCGSGS-CVPLYDGYKCVCTQSCKESH 292
PC S C+ GYKC CT H
Sbjct: 942 PCQHDSKCILTPKGYKCDCTPGYVGEH 968
Score = 43 (20.2 bits), Expect = 0.00035, Sum P(4) = 0.00035
Identities = 10/37 (27%), Positives = 15/37 (40%)
Query: 249 EAIQGVNVVNCAHPCITQPCGSGS-CVPLYDGYKCVC 284
+ +G N C C + S CV + Y C+C
Sbjct: 884 DGFEGENCEINVDDCEDNDCENNSTCVDGINNYTCLC 920
Score = 37 (18.1 bits), Expect = 3.7e-10, Sum P(3) = 3.7e-10
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 34 KIKGRSKECLEDKCNKTPCEH 54
+ +G + +C K NK P +H
Sbjct: 407 RCEGTTVDCSNQKLNKIP-DH 426
>UNIPROTKB|Q9NYQ6 [details] [associations]
symbol:CELSR1 "Cadherin EGF LAG seven-pass G-type receptor
1" species:9606 "Homo sapiens" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0007156 "homophilic cell adhesion" evidence=IEA]
[GO:0007218 "neuropeptide signaling pathway" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] [GO:0001942 "hair
follicle development" evidence=IEA] [GO:0007266 "Rho protein signal
transduction" evidence=IEA] [GO:0007626 "locomotory behavior"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0032956 "regulation of actin
cytoskeleton organization" evidence=IEA] [GO:0042060 "wound
healing" evidence=IEA] [GO:0042249 "establishment of planar
polarity of embryonic epithelium" evidence=IEA] [GO:0042472 "inner
ear morphogenesis" evidence=IEA] [GO:0045176 "apical protein
localization" evidence=IEA] [GO:0048105 "establishment of body hair
planar orientation" evidence=IEA] [GO:0060488 "orthogonal
dichotomous subdivision of terminal units involved in lung
branching morphogenesis" evidence=IEA] [GO:0060489 "planar
dichotomous subdivision of terminal units involved in lung
branching morphogenesis" evidence=IEA] [GO:0060490 "lateral
sprouting involved in lung morphogenesis" evidence=IEA] [GO:0090179
"planar cell polarity pathway involved in neural tube closure"
evidence=IEA] [GO:0090251 "protein localization involved in
establishment of planar polarity" evidence=IEA] [GO:0004888
"transmembrane signaling receptor activity" evidence=NAS]
[GO:0005887 "integral to plasma membrane" evidence=TAS] [GO:0007417
"central nervous system development" evidence=NAS;TAS] [GO:0004930
"G-protein coupled receptor activity" evidence=NAS] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=NAS]
[GO:0016021 "integral to membrane" evidence=TAS] [GO:0046983
"protein dimerization activity" evidence=NAS] [GO:0001736
"establishment of planar polarity" evidence=ISS] [GO:0001843
"neural tube closure" evidence=ISS] InterPro:IPR000203
InterPro:IPR000742 InterPro:IPR000832 InterPro:IPR001879
InterPro:IPR002126 InterPro:IPR015919 InterPro:IPR017981
InterPro:IPR020894 Pfam:PF00002 Pfam:PF00008 Pfam:PF00028
Pfam:PF01825 Pfam:PF02793 PRINTS:PR00205 PRINTS:PR00249
PROSITE:PS00232 PROSITE:PS00649 PROSITE:PS00650 PROSITE:PS50026
PROSITE:PS50221 PROSITE:PS50227 PROSITE:PS50261 PROSITE:PS50268
SMART:SM00008 SMART:SM00112 SMART:SM00181 SMART:SM00303
InterPro:IPR000152 GO:GO:0001764 GO:GO:0005887 GO:GO:0009952
GO:GO:0004930 GO:GO:0007218 GO:GO:0005509 GO:GO:0007626
GO:GO:0007417 GO:GO:0046983 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0042472 GO:GO:0001942 PROSITE:PS01186
GO:GO:0007266 GO:GO:0001843 eggNOG:NOG12793 GO:GO:0042060
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 SMART:SM00180
SMART:SM00282 PROSITE:PS00010 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 GO:GO:0032956 GO:GO:0001736 GO:GO:0007156
SUPFAM:SSF49313 InterPro:IPR022624 Pfam:PF12003 MIM:182940
Gene3D:2.60.40.60 GO:GO:0045176 Pfam:PF02210 EMBL:AF231024
EMBL:AL031588 EMBL:AL031597 EMBL:AL021392 EMBL:BC000059
IPI:IPI00003384 IPI:IPI00874160 RefSeq:NP_055061.1
UniGene:Hs.252387 ProteinModelPortal:Q9NYQ6 SMR:Q9NYQ6
IntAct:Q9NYQ6 MINT:MINT-1413345 STRING:Q9NYQ6 PhosphoSite:Q9NYQ6
DMDM:22095551 PaxDb:Q9NYQ6 PRIDE:Q9NYQ6 Ensembl:ENST00000262738
GeneID:9620 KEGG:hsa:9620 UCSC:uc003bhw.1 CTD:9620
GeneCards:GC22M046755 HGNC:HGNC:1850 MIM:604523 neXtProt:NX_Q9NYQ6
PharmGKB:PA26393 HOGENOM:HOG000231346 HOVERGEN:HBG050887 KO:K04600
OMA:NKPNIGH OrthoDB:EOG4KKZ23 ChiTaRS:CELSR1 GenomeRNAi:9620
NextBio:36101 ArrayExpress:Q9NYQ6 Bgee:Q9NYQ6 CleanEx:HS_CELSR1
Genevestigator:Q9NYQ6 GermOnline:ENSG00000075275 GO:GO:0048105
GO:GO:0042249 GO:GO:0060490 GO:GO:0060488 GO:GO:0090179
GO:GO:0060489 GO:GO:0090251 Uniprot:Q9NYQ6
Length = 3014
Score = 172 (65.6 bits), Expect = 4.6e-10, Sum P(2) = 4.6e-10
Identities = 44/134 (32%), Positives = 68/134 (50%)
Query: 46 KCNKTPCEHGGKCITTP-GSSYCLCPLG-FTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQ 103
+C C++GG C+ G +C+CP G + C+ PQ S++ ++GL ++
Sbjct: 1406 RCANGVCKNGGTCVNLLIGGFHCVCPPGEYERPYCEVTTRSFPPQ----SFVTFRGLRQR 1461
Query: 104 YLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSN 163
+ + LT F E NG+LLYNG R + DFIAL + D V TF G T+
Sbjct: 1462 FHFTISLT--FATQERNGLLLYNG-RFNEKHDFIALEIVDEQVQLTFSAGETTTTVAPKV 1518
Query: 164 P--ISLGEWHKLRL 175
P +S G WH +++
Sbjct: 1519 PSGVSDGRWHSVQV 1532
Score = 145 (56.1 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 61/254 (24%), Positives = 103/254 (40%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQ-FNGSSYLRYQGLGEQYL 105
C+ C++GG C+ C CPL F G C+ + PQ F+G S + + L
Sbjct: 1653 CDGRRCQNGGTCVNRWNMYLCECPLRFGGKNCEQAMPH--PQLFSGESVVSWSDLNIIIS 1710
Query: 106 SLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTG--AATLRSSN 163
L ++F+ + + +L+ + G F LN+ Y+ F G + + S
Sbjct: 1711 VPWYLGLMFRTRKEDSVLMEA--TSGGPTSFRLQILNN-YLQFEVSHGPSDVESVMLSGL 1767
Query: 164 PISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIV--- 220
++ GEWH L + ++ + L G Q G+ ++V
Sbjct: 1768 RVTDGEWHHLLIELKNVKEDSEMKHLVT-MTLDYG-MDQNKADIGGMLPGLTVRSVVVGG 1825
Query: 221 --SPKVKIKSSFIGCIQKVLINNHELNI----LGEAIQGVNVVN-CA--HPCITQPCGSG 271
KV ++ F GC+Q V + N+ + A++ V V + C PC + PC
Sbjct: 1826 ASEDKVSVRRGFRGCMQGVRMGGTPTNVATLNMNNALK-VRVKDGCDVDDPCTSSPCPPN 1884
Query: 272 S-CVPLYDGYKCVC 284
S C ++ Y CVC
Sbjct: 1885 SRCHDAWEDYSCVC 1898
Score = 66 (28.3 bits), Expect = 4.6e-10, Sum P(2) = 4.6e-10
Identities = 19/77 (24%), Positives = 34/77 (44%)
Query: 212 GGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNCA---HPCITQPC 268
GGVP N+ F+GC++ + ++ +++ G CA + C + C
Sbjct: 1601 GGVP--NLPEDFPVHNRQFVGCMRNLSVDGKNVDMAGFIANNGTREGCAARRNFCDGRRC 1658
Query: 269 -GSGSCVPLYDGYKCVC 284
G+CV ++ Y C C
Sbjct: 1659 QNGGTCVNRWNMYLCEC 1675
Score = 57 (25.1 bits), Expect = 3.9e-09, Sum P(2) = 3.9e-09
Identities = 14/35 (40%), Positives = 17/35 (48%)
Query: 257 VNCAHPCITQPCGS-GSCV--P-LYDGYKCVCTQS 287
+NC C PC + G+CV P GY C C S
Sbjct: 1905 INCVDACHLNPCENMGACVRSPGSPQGYVCECGPS 1939
Score = 41 (19.5 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 6/14 (42%), Positives = 10/14 (71%)
Query: 47 CNKTPCEHGGKCIT 60
C + PCE+ KC++
Sbjct: 1307 CLREPCENYMKCVS 1320
Score = 38 (18.4 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 12/39 (30%), Positives = 20/39 (51%)
Query: 213 GVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAI 251
G PD+ +S + + SF G I V+I N ++L +
Sbjct: 2598 GNPDFCWLSLQDTLIWSFAGPIGAVIIINTVTSVLSAKV 2636
>UNIPROTKB|F1NHG5 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0001656
"metanephros development" evidence=IEA] [GO:0001657 "ureteric bud
development" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001933 "negative regulation of
protein phosphorylation" evidence=IEA] [GO:0002042 "cell migration
involved in sprouting angiogenesis" evidence=IEA] [GO:0005095
"GTPase inhibitor activity" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0008201 "heparin binding" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0010593
"negative regulation of lamellipodium assembly" evidence=IEA]
[GO:0010596 "negative regulation of endothelial cell migration"
evidence=IEA] [GO:0010629 "negative regulation of gene expression"
evidence=IEA] [GO:0016337 "cell-cell adhesion" evidence=IEA]
[GO:0021836 "chemorepulsion involved in postnatal olfactory bulb
interneuron migration" evidence=IEA] [GO:0021972 "corticospinal
neuron axon guidance through spinal cord" evidence=IEA] [GO:0030308
"negative regulation of cell growth" evidence=IEA] [GO:0030837
"negative regulation of actin filament polymerization"
evidence=IEA] [GO:0031290 "retinal ganglion cell axon guidance"
evidence=IEA] [GO:0032870 "cellular response to hormone stimulus"
evidence=IEA] [GO:0033563 "dorsal/ventral axon guidance"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043116 "negative regulation of vascular
permeability" evidence=IEA] [GO:0043237 "laminin-1 binding"
evidence=IEA] [GO:0043394 "proteoglycan binding" evidence=IEA]
[GO:0045499 "chemorepellent activity" evidence=IEA] [GO:0048495
"Roundabout binding" evidence=IEA] [GO:0048754 "branching
morphogenesis of an epithelial tube" evidence=IEA] [GO:0048846
"axon extension involved in axon guidance" evidence=IEA]
[GO:0050929 "induction of negative chemotaxis" evidence=IEA]
[GO:0051058 "negative regulation of small GTPase mediated signal
transduction" evidence=IEA] [GO:0051414 "response to cortisol
stimulus" evidence=IEA] [GO:0060763 "mammary duct terminal end bud
growth" evidence=IEA] [GO:0061364 "apoptotic process involved in
luteolysis" evidence=IEA] [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IEA] [GO:0071504
"cellular response to heparin" evidence=IEA] [GO:0071672 "negative
regulation of smooth muscle cell chemotaxis" evidence=IEA]
[GO:0071676 "negative regulation of mononuclear cell migration"
evidence=IEA] [GO:0090024 "negative regulation of neutrophil
chemotaxis" evidence=IEA] [GO:0090260 "negative regulation of
retinal ganglion cell axon guidance" evidence=IEA] [GO:0090288
"negative regulation of cellular response to growth factor
stimulus" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005737
GO:GO:0008285 GO:GO:0005615 GO:GO:0009986 GO:GO:0030308
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0008201 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0043065 GO:GO:0071504 GO:GO:0005095
GO:GO:0016337 PROSITE:PS01186 GO:GO:0032870 GO:GO:0030837
GO:GO:0010629 InterPro:IPR003645 InterPro:IPR001791 Pfam:PF00054
SMART:SM00274 SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025
GO:GO:0071672 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 GO:GO:0010596 GO:GO:0001933
GO:GO:0071676 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 GO:GO:0070100 GO:GO:0090288 GO:GO:0045499
Pfam:PF01463 GO:GO:0010593 GO:GO:0051414
GeneTree:ENSGT00700000104083 GO:GO:0050929 GO:GO:0090024
GO:GO:0051058 OMA:RHKMFKG EMBL:AADN02015249 EMBL:AADN02015250
EMBL:AADN02015251 EMBL:AADN02015252 EMBL:AADN02015253
EMBL:AADN02015254 EMBL:AADN02015255 EMBL:AADN02015256
EMBL:AADN02015257 EMBL:AADN02015258 EMBL:AADN02015259
EMBL:AADN02015260 EMBL:AADN02015261 EMBL:AADN02015262
EMBL:AADN02015263 EMBL:AADN02015264 EMBL:AADN02015265
EMBL:AADN02015266 EMBL:AADN02015267 EMBL:AADN02015268
EMBL:AADN02015269 EMBL:AADN02015270 EMBL:AADN02015271
IPI:IPI00883181 Ensembl:ENSGALT00000023294 ArrayExpress:F1NHG5
Uniprot:F1NHG5
Length = 1525
Score = 175 (66.7 bits), Expect = 4.7e-10, Sum P(3) = 4.7e-10
Identities = 61/245 (24%), Positives = 103/245 (42%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQYLS 106
C+ C++G +CI C C G+ G+ C+ + + N SYL+ + S
Sbjct: 1121 CDNYECQNGAQCIVKESEPICQCLSGYQGEKCEKLISINF--VNKESYLQIPSA--KIHS 1176
Query: 107 LLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGT-GAATLRSSNPI 165
++T+ E +GILLY G + D IA+ L V ++D G+ A+ + S I
Sbjct: 1177 QTNITLQIATDEDSGILLYKGDK-----DHIAVELYRGRVRVSYDTGSYPASAIYSVETI 1231
Query: 166 SLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIV----- 220
+ G +H + L + L +D I + + GG+P N +
Sbjct: 1232 NDGNFHIVELLAMDQILSLSIDGGSPKIITNLSKQSTLNFDSPLYVGGMPVKNNIAALRQ 1291
Query: 221 SPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNCAHPCITQPCGSGSC-VPLYDG 279
SP +SF GCI+ + IN+ + +Q V ++ PC + C G+C
Sbjct: 1292 SPGQN-GTSFHGCIRNLYINSELQDFRNVPLQ-VGILPGCEPCHKKVCVHGTCHATSQSS 1349
Query: 280 YKCVC 284
+ C C
Sbjct: 1350 FTCEC 1354
Score = 108 (43.1 bits), Expect = 7.8e-08, Sum P(4) = 7.8e-08
Identities = 21/65 (32%), Positives = 30/65 (46%)
Query: 26 WIQLNDGNKIKGRSKECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQ 85
W DG +G + E D C CE+ C+ + CLCP +TG+LC+ +LD
Sbjct: 979 WCTCADG--FEGENCEINVDDCEDNDCENNSTCVDGINNYTCLCPPEYTGELCEEKLDFC 1036
Query: 86 VPQFN 90
N
Sbjct: 1037 AQNLN 1041
Score = 89 (36.4 bits), Expect = 7.5e-06, Sum P(4) = 7.5e-06
Identities = 17/41 (41%), Positives = 20/41 (48%)
Query: 45 DKC--NKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLD 83
D C N PC+H KCI TP C C G+ G+ C D
Sbjct: 1034 DFCAQNLNPCQHDSKCILTPKGYKCDCTPGYVGEHCDIDFD 1074
Score = 86 (35.3 bits), Expect = 1.5e-05, Sum P(4) = 1.5e-05
Identities = 17/51 (33%), Positives = 23/51 (45%)
Query: 36 KGRSKECLEDKCNKTPCEHGGKCITTPGSS---YCLCPLGFTGDLCQTRLD 83
KG+ + C PC HGG C G +C C GF G+ C+ +D
Sbjct: 946 KGQDCDIPIHACISNPCNHGGTCHLKEGEKDGFWCTCADGFEGENCEINVD 996
Score = 80 (33.2 bits), Expect = 0.00055, Sum P(3) = 0.00055
Identities = 12/44 (27%), Positives = 22/44 (50%)
Query: 45 DKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQ 88
D C C++G +C C+CP G++G C+ + +P+
Sbjct: 1074 DDCQDNKCKNGAQCTDAVNGYTCICPEGYSGLFCEFSPPMVLPR 1117
Score = 79 (32.9 bits), Expect = 3.3e-05, Sum P(4) = 3.3e-05
Identities = 16/37 (43%), Positives = 18/37 (48%)
Query: 46 KCN---KTPCEHGGKCITTPGSSY-CLCPLGFTGDLC 78
KCN PC++ G C P Y C CP GF G C
Sbjct: 914 KCNPCLSNPCKNDGTCNNDPVDFYRCTCPYGFKGQDC 950
Score = 77 (32.2 bits), Expect = 7.8e-08, Sum P(4) = 7.8e-08
Identities = 18/62 (29%), Positives = 29/62 (46%)
Query: 340 NIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGV 399
NI ++I T SG++L+ G KD +A+ ++ G V Y IN+G
Sbjct: 1179 NITLQIATDEDSGILLYKGD---KDHIAVELYRGRVRVSYDTGSYPASAIYSVETINDGN 1235
Query: 400 WH 401
+H
Sbjct: 1236 FH 1237
Score = 64 (27.6 bits), Expect = 4.7e-10, Sum P(3) = 4.7e-10
Identities = 22/68 (32%), Positives = 27/68 (39%)
Query: 262 PCITQPCGSGSCVPLYD-GYKCVCTQS-----CKESHLTEVMCASF--DHGASFLHYLD- 312
PC+ C G+C+P+ Y C C Q C E + C S HG L L
Sbjct: 1370 PCLGNKCVHGTCLPINAFSYSCKCLQGHGGVLCDEEEMLFNPCQSIRCKHGKCRLSGLGK 1429
Query: 313 PEIIHSSG 320
P SSG
Sbjct: 1430 PYCECSSG 1437
Score = 64 (27.6 bits), Expect = 7.8e-08, Sum P(4) = 7.8e-08
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 461 KFEQLNTDSGLYVGGV---EDIEELTRSKYHH--SFKGWISNLILSNDYQ 505
K LN DS LYVGG+ +I L +S + SF G I NL ++++ Q
Sbjct: 1265 KQSTLNFDSPLYVGGMPVKNNIAALRQSPGQNGTSFHGCIRNLYINSELQ 1314
Score = 55 (24.4 bits), Expect = 3.3e-05, Sum P(4) = 3.3e-05
Identities = 11/28 (39%), Positives = 13/28 (46%)
Query: 261 HPCITQPCGSGSCVPLY----DGYKCVC 284
H CI+ PC G L DG+ C C
Sbjct: 955 HACISNPCNHGGTCHLKEGEKDGFWCTC 982
Score = 51 (23.0 bits), Expect = 7.8e-08, Sum P(4) = 7.8e-08
Identities = 8/25 (32%), Positives = 13/25 (52%)
Query: 263 CITQPCGSGS-CVPLYDGYKCVCTQ 286
C C +G+ C +GY C+C +
Sbjct: 1076 CQDNKCKNGAQCTDAVNGYTCICPE 1100
Score = 50 (22.7 bits), Expect = 9.8e-08, Sum P(4) = 9.8e-08
Identities = 11/27 (40%), Positives = 12/27 (44%)
Query: 267 PCGSGS-CVPLYDGYKCVCTQSCKESH 292
PC S C+ GYKC CT H
Sbjct: 1042 PCQHDSKCILTPKGYKCDCTPGYVGEH 1068
Score = 43 (20.2 bits), Expect = 0.00046, Sum P(4) = 0.00046
Identities = 10/37 (27%), Positives = 15/37 (40%)
Query: 249 EAIQGVNVVNCAHPCITQPCGSGS-CVPLYDGYKCVC 284
+ +G N C C + S CV + Y C+C
Sbjct: 984 DGFEGENCEINVDDCEDNDCENNSTCVDGINNYTCLC 1020
Score = 37 (18.1 bits), Expect = 4.7e-10, Sum P(3) = 4.7e-10
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 34 KIKGRSKECLEDKCNKTPCEH 54
+ +G + +C K NK P +H
Sbjct: 507 RCEGTTVDCSNQKLNKIP-DH 526
>UNIPROTKB|F1LPV4 [details] [associations]
symbol:Cntnap1 "Contactin-associated protein 1"
species:10116 "Rattus norvegicus" [GO:0002175 "protein localization
to paranode region of axon" evidence=IEA] [GO:0007010 "cytoskeleton
organization" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0008076 "voltage-gated potassium channel complex"
evidence=IEA] [GO:0008088 "axon cargo transport" evidence=IEA]
[GO:0030913 "paranodal junction assembly" evidence=IEA] [GO:0033270
"paranode region of axon" evidence=IEA] [GO:0048812 "neuron
projection morphogenesis" evidence=IEA] [GO:0050884 "neuromuscular
process controlling posture" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
InterPro:IPR000421 InterPro:IPR000742 Pfam:PF00754 PROSITE:PS01285
PROSITE:PS01286 PROSITE:PS50022 PROSITE:PS50026 SMART:SM00181
SMART:SM00231 RGD:70902 INTERPRO:IPR002181 GO:GO:0016021
GO:GO:0007165 GO:GO:0007155 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 InterPro:IPR008979
SUPFAM:SSF49785 InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025
Gene3D:3.90.215.10 InterPro:IPR014716 SUPFAM:SSF56496
PROSITE:PS51406 Pfam:PF02210 InterPro:IPR003585 SMART:SM00294
OMA:RHDLHYH GeneTree:ENSGT00560000076804 IPI:IPI00208699
Ensembl:ENSRNOT00000027505 ArrayExpress:F1LPV4 Uniprot:F1LPV4
Length = 1324
Score = 155 (59.6 bits), Expect = 4.8e-10, Sum P(2) = 4.8e-10
Identities = 66/233 (28%), Positives = 98/233 (42%)
Query: 64 SSYCLCPLGFTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQYLSLLDLTIVFKAIEPNGIL 123
+ + L PL GD R F + LR+ + + LD++ F+ P+G+
Sbjct: 713 AQFFLRPLRCYGD----RNSWNTISFRTGAALRFPPIRANHS--LDVSFYFRTSAPSGVF 766
Query: 124 LYN--GHRADGVGDFIALYLN-DRYVDFTFDLGTGAATLR-SSNPISLG--EWHKLRLTR 177
L N G ++ + LN R V F FD+G G L S+ EWH +R
Sbjct: 767 LENMGGPFCQWRRPYVRVELNTSRDVVFAFDIGNGDENLTVHSDDFEFNDDEWHLVRAEI 826
Query: 178 TGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKV 237
+ A L+VD P +L P P P Y + S ++K + F+GC++ +
Sbjct: 827 NVKQARLRVDHRP--WVLRPMPLQTYIWLEYDQ----PLY-VGSAELK-RRPFVGCLRAM 878
Query: 238 LINNHELNILGEA--IQGV--NVV-NCAHPCITQPC-GSGSCVPLYDGYKCVC 284
+N LN+ G A +G N +C HP PC G CV Y Y C C
Sbjct: 879 RLNGVTLNLEGRANASEGTFPNCTGHCTHPRF--PCFHGGRCVERYSYYTCDC 929
Score = 125 (49.1 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 46/172 (26%), Positives = 74/172 (43%)
Query: 89 FNGSSYLRYQGLGEQYLSLLDL-TIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVD 147
F+G + Y+ SL D+ FK E +G+LL H GD++ L L ++
Sbjct: 121 FDGDDAISYRFQRGASQSLWDVFAFSFKTEEKDGLLL---HTEGSQGDYVTLELQGAHLL 177
Query: 148 FTFDLGTGAATLRSSNP-ISLG------EWHKLRLTRTGRHAYLQVDRFPSSQILSPGPF 200
LG+ R + +S G WH +R+ R GR A L +D + +L+ G F
Sbjct: 178 LHMSLGSSPIQPRPGHTTVSAGGVLNDLSWHYVRVDRYGREANLTLDGYVHRFVLN-GDF 236
Query: 201 TQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQ 252
+ GG+ + + +F GCI+ V+ N +NI A+Q
Sbjct: 237 ERLNLENEIFIGGL--VGAARKNLAYRHNFRGCIENVIYNR--INIAEMAVQ 284
Score = 114 (45.2 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 34/138 (24%), Positives = 67/138 (48%)
Query: 109 DLTIVFKAIEPNGILLYNGHRADGVGDFIALYLN-DRYVDFTFDLGTGAATLR-SSNPIS 166
+++ F +LLY + V D++A+ + D + + LGT + ++ P++
Sbjct: 1027 EVSFSFSTSSAPAVLLYV---SSFVRDYMAVLIKEDGTLQLRYQLGTSPYVYQLTTRPVT 1083
Query: 167 LGEWHKLRLTRTGRHAYLQVDRFP-SSQILSPGPFTQXXXXXXXXXGGVPDYNIVSPKVK 225
G+ H + +TR R+ ++QVD FP + Q S +Q G V + ++ P+++
Sbjct: 1084 DGQPHSVNITRVYRNLFIQVDYFPLTEQKFSLLVDSQLDSPKALYLGRVMETGVIDPEIQ 1143
Query: 226 IKSS--FIGCIQKVLINN 241
++ F GC+ V NN
Sbjct: 1144 RYNTPGFSGCLSGVRFNN 1161
Score = 76 (31.8 bits), Expect = 4.8e-10, Sum P(2) = 4.8e-10
Identities = 14/41 (34%), Positives = 20/41 (48%)
Query: 43 LEDKCNKTPCEHGGKCITTPGSSYCLCPL-GFTGDLCQTRL 82
+ D+C+ CEH G+C + C C L G+ G C L
Sbjct: 484 ITDRCSPNMCEHDGRCYQSWDDFICYCELTGYKGVTCHEPL 524
Score = 63 (27.2 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 16/49 (32%), Positives = 20/49 (40%)
Query: 33 NKIKGRSKECLEDKCN--KTPCEHGGKCITTPGSSYCLCPL-GFTGDLC 78
N +G C C + PC HGG+C+ C C L F G C
Sbjct: 892 NASEGTFPNCT-GHCTHPRFPCFHGGRCVERYSYYTCDCDLTAFDGPYC 939
Score = 55 (24.4 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 12/63 (19%), Positives = 25/63 (39%)
Query: 341 IDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGVW 400
+ R +T +GL+L++ + L + G +V ++N+G W
Sbjct: 329 VSFRFRTWDLTGLLLFSRLGDGLGHVELMLSEGQVNVSIAQTGRKKLQFAAGYRLNDGFW 388
Query: 401 HRL 403
H +
Sbjct: 389 HEV 391
>UNIPROTKB|F1RXZ0 [details] [associations]
symbol:CNTNAP5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007155 "cell adhesion" evidence=IEA]
InterPro:IPR000421 InterPro:IPR000742 PROSITE:PS01286
PROSITE:PS50022 PROSITE:PS50026 SMART:SM00181 INTERPRO:IPR002181
GO:GO:0007165 GO:GO:0007155 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 InterPro:IPR001791 SMART:SM00282
PROSITE:PS50025 SUPFAM:SSF56496 PROSITE:PS51406 Pfam:PF02210
GeneTree:ENSGT00560000076804 OMA:FANRRMH EMBL:AEMK01014103
EMBL:AEMK01194059 EMBL:AEMK01194621 EMBL:CU469228 EMBL:CU571099
EMBL:CU856257 EMBL:CU862002 EMBL:CU928327
Ensembl:ENSSSCT00000017126 Uniprot:F1RXZ0
Length = 1184
Score = 148 (57.2 bits), Expect = 5.1e-10, Sum P(2) = 5.1e-10
Identities = 83/332 (25%), Positives = 131/332 (39%)
Query: 89 FNGSSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDF 148
+ +SYL + ++ + D++ FK +G+ L N G+ DFI L ++ + F
Sbjct: 673 YTEASYLHFPTFHAEFSA--DISFFFKTTALSGVFLENL----GIKDFIRLEISXKKKIF 726
Query: 149 TF-DLGTGAATLRSSNPISL----GEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQX 203
D+ G +P+SL W +R + Y+Q SS G +Q
Sbjct: 727 XLVDVFQGPPLYLVGSPLSLMFKDTNWGTVRRENNLKITYVQQTNLGSSW--RTG--SQK 782
Query: 204 XXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEA--IQGVNVVNCAH 261
+ D S + K F+GCI+ + +N +L++ A GV C
Sbjct: 783 THILFPTNCNM-DLGGTSSRQK---GFLGCIRSLHLNGQKLDLEERAKVTSGVRP-GCPG 837
Query: 262 PCIT--QPC-GSGSCVPLYDGYKCVCTQSCKESHLTEV-MCASFDHGASFLHYLDPEIIH 317
C + C G CV + GY C CT S E + + A F+ G S +
Sbjct: 838 HCSSYGSTCHNGGKCVEKHSGYFCDCTTSPYEGPFCKKEVSAVFEAGTSVTYVFQEPYPV 897
Query: 318 SSGLLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGI-HNGYAH 376
+ L ++VD E NI + T+ GL+L+ SS S+D LA+ I NG
Sbjct: 898 TKNLSLSSSAIYVD-AAPSRE-NIALSFVTAQVPGLLLYVNSS-SQDSLAVLICKNGSLQ 954
Query: 377 VMYXXXXXXXXXXXXQTK-INNGVWHRLTVHR 407
V Y T+ N H L ++R
Sbjct: 955 VRYQLSKEEIHVFTIDTENFANRRLHHLKINR 986
Score = 118 (46.6 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 52/209 (24%), Positives = 88/209 (42%)
Query: 78 CQTRLDLQVPQFNGSSYLRYQGLGEQYLSLLD--LTIVFKAIEPNGILLYN-GHRADGVG 134
C + D V F+G S L Y+ ++ +S L +++ FK+++ +G+L + G R G
Sbjct: 50 CSYKSD--VADFDGRSSLLYR-FNQKLMSTLKDVISLKFKSMQGDGVLFHGEGQR----G 102
Query: 135 DFIALYLNDRYVDFTFDLGTGAATLRSSNP-ISLGE------WHKLRLTRTGRHAYLQVD 187
D I L L + +L L SS P +LG WH + L R G+ VD
Sbjct: 103 DQITLELQKGRLALHLNLDDSKPRLSSSPPSATLGSLLDDQHWHSVLLERVGKQVNFTVD 162
Query: 188 RFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNIL 247
+ + + G GG+P P +K +F GC++ + N +NI+
Sbjct: 163 KH-TQHFRTKGEADALDIDYELSFGGIPVPG--KPGTFLKKNFHGCMENLYYNG--VNII 217
Query: 248 GEAIQGVNVVNCAHPCITQPCGSGSCVPL 276
A + + + +T C VP+
Sbjct: 218 DLAKRRKHQIYTVGN-VTFSCSEPQIVPI 245
Score = 82 (33.9 bits), Expect = 5.1e-10, Sum P(2) = 5.1e-10
Identities = 15/41 (36%), Positives = 21/41 (51%)
Query: 43 LEDKCNKTPCEHGGKCITTPGSSYCLCP-LGFTGDLCQTRL 82
++D+C CEHGG C + + YC C G+ G C L
Sbjct: 423 IKDRCLPNYCEHGGSCSQSWTTFYCNCTDTGYVGATCHNSL 463
Score = 70 (29.7 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 14/67 (20%), Positives = 30/67 (44%)
Query: 340 NIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGV 399
++ + +T + GL+L T S+ L L + G ++ +N+G+
Sbjct: 267 SVSFQFRTWNQDGLLLSTMLSEGSGTLLLSLEGGRLRLVIQKMTERAAEILTGRNLNDGL 326
Query: 400 WHRLTVH 406
WH L+++
Sbjct: 327 WHLLSIN 333
>ZFIN|ZDB-GENE-070206-1 [details] [associations]
symbol:nrxn1a "neurexin 1a" species:7955 "Danio
rerio" [GO:0007268 "synaptic transmission" evidence=IEA]
[GO:0051965 "positive regulation of synapse assembly" evidence=IEA]
[GO:0007269 "neurotransmitter secretion" evidence=IEA] [GO:0090129
"positive regulation of synapse maturation" evidence=IEA]
[GO:0007416 "synapse assembly" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] InterPro:IPR000742 InterPro:IPR027158
PROSITE:PS50026 SMART:SM00181 ZFIN:ZDB-GENE-070206-1 GO:GO:0016021
GO:GO:0046872 GO:GO:0007155 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025
Pfam:PF02210 InterPro:IPR003585 SMART:SM00294 EMBL:DQ641424
IPI:IPI00829233 RefSeq:NP_001073490.1 UniGene:Dr.19533
ProteinModelPortal:A1XQX0 SMR:A1XQX0 Ensembl:ENSDART00000093094
GeneID:565531 KEGG:dre:565531 CTD:565531 eggNOG:NOG302266
GeneTree:ENSGT00560000076996 HOGENOM:HOG000230481
HOVERGEN:HBG052670 InParanoid:A1XQX0 KO:K07377 OMA:NAYACEC
OrthoDB:EOG41G339 NextBio:20885932 ArrayExpress:A1XQX0 Bgee:A1XQX0
PANTHER:PTHR10127:SF309 Uniprot:A1XQX0
Length = 1491
Score = 191 (72.3 bits), Expect = 5.3e-10, Sum P(2) = 5.3e-10
Identities = 95/400 (23%), Positives = 166/400 (41%)
Query: 92 SSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFD 151
SSY+ L + Y S+ L FK P+G++LYN R DG DFI + L Y+ + D
Sbjct: 902 SSYVTLPTL-QAYYSM-HLFFQFKTTSPDGLILYN--RGDG-NDFIVVELVKGYLHYVSD 956
Query: 152 LGTGAATLR--SSNPISLGEWHKLRLTRTGRHAY-LQVDRFPSSQILSPGPFTQXXXXXX 208
LG GA ++ S+ P++ WH + ++R + + +++D ++Q + G
Sbjct: 957 LGNGAHLIKGNSNTPLNDNHWHNVMISRDTNNLHTVKIDTKITTQT-TMGAKNLDLKGDL 1015
Query: 209 XXXGGVPDYNIVSPK-VKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVN--CAHP--- 262
G D PK V K F GC+ V +N ++ +A+ V C P
Sbjct: 1016 YVGGVAKDMYKDLPKLVHSKEGFQGCLASVDLNGRLPDLQSDALSTAGQVERGCEGPSTT 1075
Query: 263 CITQPCGS-GSCVPLYDGYKCVCTQSCKESHLTEVMCASFDHGASFLHYLDPEIIHSSGL 321
C C + G C+ ++G+ C C+ + L C D G +++ D GL
Sbjct: 1076 CQEDSCSNQGVCLQQWEGFSCDCSMTSYGGPL----CN--DPGTTYIFGRD------GGL 1123
Query: 322 LHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSK-DFLALGIHNGYAHVMYX 380
+ Y + + D T + + + T +++ SS D+L L I G V++
Sbjct: 1124 IVYTWPPN-DRPSTRAD-RLAVGFSTQQKDAVLVRVDSSSGLGDYLQLQIERGNIKVVFN 1181
Query: 381 XXXXXXXXXXXQTKINNGVWHRLTVHR---NFMVVMHGSSHTRSNKSSKIEFKCLSIQRL 437
+N+G +H + R N + + S I+ + L+I R
Sbjct: 1182 VGTDDINIEETSKFVNDGKYHIVRFTRSGGNATLQVDDLPVIERYPSGNIDNERLAIAR- 1240
Query: 438 HRTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVE 477
R + L R+ D+ + G + N+ + + +GG E
Sbjct: 1241 QRIPYR-LGRVVDDWLLDK--GRQLTIFNSQTTIKIGGWE 1277
Score = 162 (62.1 bits), Expect = 7.4e-10, Sum P(2) = 7.4e-10
Identities = 70/287 (24%), Positives = 126/287 (43%)
Query: 114 FKAIEPNGILLYN-G-----HRADGVG------DFIALYLNDRYVDFTFDLGTGAATLRS 161
F+ EPNG+LL++ G + D DF A+ + D ++ D+G+G R+
Sbjct: 495 FRTTEPNGLLLFSHGKPKPQQQKDPKSPKTLKVDFFAIEMLDGHLYLLLDMGSGTTKTRA 554
Query: 162 SNP-ISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPD--YN 218
N ++ GEW+ + R GR + V+ + +PG GG+P+
Sbjct: 555 VNKKVNDGEWYHVDFQRDGRSGTISVNSI-RTPYNAPGESEILDLDDKLYLGGLPEDRAG 613
Query: 219 IVSPK----VKIKSSFIGCIQKVLINNHELNI--LGEAIQGVNVV-NCA-HP---CITQP 267
++ P + ++GC++ + ++ +I + EA + V V +C+ P C++ P
Sbjct: 614 LIFPTEVWTALLNYGYVGCVRDLFMDGQSKDIRRIAEAQRAVGVKPSCSKEPPKQCLSNP 673
Query: 268 C-GSGSCVPLYDGYKCVCTQSCKESHLTEVMCASFDHGASFLHYLDPEIIHSSGLLHYKF 326
C SG+C ++ Y C C+ T + S + A+ L Y G K
Sbjct: 674 CLNSGTCREGWNRYVCDCSG-------TGYLGRSCERDATILSY--------DGSKFMKI 718
Query: 327 QLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNG 373
QL V T E ++ +R ++ + G+++ T S S D L L + G
Sbjct: 719 QLPVVMH-TEAE-DVSLRFRSQRAYGVLMATTSQNSADTLRLELDGG 763
Score = 127 (49.8 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 50/224 (22%), Positives = 91/224 (40%)
Query: 28 QLNDGNKIKGRSKECLED---KCNKTPCEHGGKCITTPGSSYCLCP-LGFTGDLCQTRLD 83
++ + + G C ++ +C PC + G C C C G+ G C+ D
Sbjct: 647 RIAEAQRAVGVKPSCSKEPPKQCLSNPCLNSGTCREGWNRYVCDCSGTGYLGRSCER--D 704
Query: 84 LQVPQFNGSSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLY--NGHRADGV-----GDF 136
+ ++GS +++ Q + D+++ F++ G+L+ + + AD + G
Sbjct: 705 ATILSYDGSKFMKIQLPVVMHTEAEDVSLRFRSQRAYGVLMATTSQNSADTLRLELDGGR 764
Query: 137 IALYLNDRYVDFTFDLGTGAATLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILS 196
+ L +N + G T+ S ++ EWH +R+ R G+ L VD S+
Sbjct: 765 VRLTVNLDCIRINCTTSKGPETIFSGQNLNDNEWHTVRVVRRGKSLKLMVDDLQPSEGQI 824
Query: 197 PGPFTQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLIN 240
G TQ G+ P V S+FIG +Q + N
Sbjct: 825 TGDHTQLEFHNVET--GIVTEKRYMPAVP--SNFIGHLQGLSFN 864
Score = 120 (47.3 bits), Expect = 2.1e-06, Sum P(3) = 2.1e-06
Identities = 46/177 (25%), Positives = 82/177 (46%)
Query: 89 FNGSSYLRYQGLGEQYLSLLD-LTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVD 147
F GS Y Y S D +T+ FK ++ NG++L+ G AD ++ L L + V
Sbjct: 266 FKGSEYFCYDLSPNPIQSSSDEITLSFKTLQRNGLMLHTGKSAD----YVNLALKNGAVS 321
Query: 148 FTFDLGTGA--ATLRSSN-PISLGEWHKLRLTRTGR-HA---YLQVDRFPSSQ------I 194
+LG+GA A + N + WH +++TR R H+ + V++ S I
Sbjct: 322 LVINLGSGAFEALVEPVNGKFNDNAWHDVKVTRNLRQHSGIGHAMVNKLHCSVTISVDGI 381
Query: 195 LSPGPFTQXXXXXXXXX-----GGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNI 246
L+ +TQ GG P + P + ++F+GC+++V+ N+++ +
Sbjct: 382 LTTTGYTQEDYTMLGSDDFFYVGGSPSTADL-PGSPVSNNFMGCLKEVVYKNNDVRL 437
Score = 106 (42.4 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 22/72 (30%), Positives = 34/72 (47%)
Query: 338 EFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINN 397
E + +KT S+ GL+++ DFL L IHNG + + T +N+
Sbjct: 48 ESEMSFNMKTKSAHGLLVYFDDEGFCDFLELLIHNGRLSLRFSIFCAEPATVFSDTAVND 107
Query: 398 GVWHRLTVHRNF 409
WH +T+ RNF
Sbjct: 108 SRWHAVTLRRNF 119
Score = 68 (29.0 bits), Expect = 7.4e-10, Sum P(2) = 7.4e-10
Identities = 31/109 (28%), Positives = 53/109 (48%)
Query: 398 GVWHRLTVHRNFMVVMHGSSHTRSNKSSKIEFKCLSIQRLHRTGKQCLIRIDTDYSMQSI 457
G H ++ N ++ G+S+T N + + + I R T ++IDT + Q+
Sbjct: 949 GYLHYVSDLGNGAHLIKGNSNTPLNDN---HWHNVMISR--DTNNLHTVKIDTKITTQTT 1003
Query: 458 SGGKFEQLNTDSGLYVGGV-----EDIEELTRSKYHHSFKGWISNLILS 501
G K L D LYVGGV +D+ +L SK F+G ++++ L+
Sbjct: 1004 MGAKNLDLKGD--LYVGGVAKDMYKDLPKLVHSK--EGFQGCLASVDLN 1048
Score = 57 (25.1 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 23/67 (34%), Positives = 37/67 (55%)
Query: 415 GSSHTRS-NKS-SKIEFKCLSIQRLHRTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLY 472
G++ TR+ NK + E+ + QR R+G + I T Y+ + G+ E L+ D LY
Sbjct: 548 GTTKTRAVNKKVNDGEWYHVDFQRDGRSGTISVNSIRTPYN----APGESEILDLDDKLY 603
Query: 473 VGGV-ED 478
+GG+ ED
Sbjct: 604 LGGLPED 610
Score = 55 (24.4 bits), Expect = 2.1e-06, Sum P(3) = 2.1e-06
Identities = 9/45 (20%), Positives = 21/45 (46%)
Query: 364 DFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGVWHRLTVHRN 408
DF A+ + +G+ +++ K+N+G W+ + R+
Sbjct: 528 DFFAIEMLDGHLYLLLDMGSGTTKTRAVNKKVNDGEWYHVDFQRD 572
Score = 39 (18.8 bits), Expect = 5.3e-10, Sum P(2) = 5.3e-10
Identities = 8/28 (28%), Positives = 16/28 (57%)
Query: 11 DDWNTVRVFRHRWDAWIQLNDGNKIKGR 38
++W+TVRV R + ++D +G+
Sbjct: 796 NEWHTVRVVRRGKSLKLMVDDLQPSEGQ 823
>RGD|70902 [details] [associations]
symbol:Cntnap1 "contactin associated protein 1" species:10116
"Rattus norvegicus" [GO:0002175 "protein localization to paranode
region of axon" evidence=ISO;ISS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0007010 "cytoskeleton organization"
evidence=ISO;ISS] [GO:0007155 "cell adhesion" evidence=IEA]
[GO:0008076 "voltage-gated potassium channel complex"
evidence=ISO;ISS] [GO:0008088 "axon cargo transport"
evidence=ISO;ISS] [GO:0016021 "integral to membrane"
evidence=IEA;IDA] [GO:0017124 "SH3 domain binding" evidence=IDA]
[GO:0030424 "axon" evidence=IDA] [GO:0030913 "paranodal junction
assembly" evidence=ISO;ISS;TAS] [GO:0031175 "neuron projection
development" evidence=ISO] [GO:0033270 "paranode region of axon"
evidence=ISO;IDA] [GO:0042552 "myelination" evidence=TAS]
[GO:0048812 "neuron projection morphogenesis" evidence=ISO;ISS]
[GO:0050884 "neuromuscular process controlling posture"
evidence=ISO;ISS] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA;ISO] InterPro:IPR000421 InterPro:IPR000742
Pfam:PF00754 PROSITE:PS01285 PROSITE:PS01286 PROSITE:PS50022
PROSITE:PS50026 SMART:SM00181 SMART:SM00231 RGD:70902
INTERPRO:IPR002181 GO:GO:0016021 GO:GO:0007165 GO:GO:0007010
GO:GO:0017124 GO:GO:0008088 GO:GO:0007155 GO:GO:0048812
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186
InterPro:IPR008979 SUPFAM:SSF49785 InterPro:IPR001791 SMART:SM00282
PROSITE:PS50025 Gene3D:3.90.215.10 InterPro:IPR014716
SUPFAM:SSF56496 PROSITE:PS00514 PROSITE:PS51406 GO:GO:0033270
Pfam:PF02210 InterPro:IPR003585 SMART:SM00294 GO:GO:0030913
GO:GO:0002175 GO:GO:0050884 HOVERGEN:HBG057718 CTD:8506
eggNOG:NOG291100 HOGENOM:HOG000230964 KO:K07379 EMBL:U87224
EMBL:AF000114 IPI:IPI00208699 PIR:T31083 RefSeq:NP_114450.1
UniGene:Rn.88654 ProteinModelPortal:P97846 STRING:P97846
PhosphoSite:P97846 PRIDE:P97846 GeneID:84008 KEGG:rno:84008
UCSC:RGD:70902 InParanoid:P97846 NextBio:616527 ArrayExpress:P97846
Genevestigator:P97846 GermOnline:ENSRNOG00000020277 Uniprot:P97846
Length = 1381
Score = 155 (59.6 bits), Expect = 5.3e-10, Sum P(2) = 5.3e-10
Identities = 66/233 (28%), Positives = 98/233 (42%)
Query: 64 SSYCLCPLGFTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQYLSLLDLTIVFKAIEPNGIL 123
+ + L PL GD R F + LR+ + + LD++ F+ P+G+
Sbjct: 770 AQFFLRPLRCYGD----RNSWNTISFRTGAALRFPPIRANHS--LDVSFYFRTSAPSGVF 823
Query: 124 LYN--GHRADGVGDFIALYLN-DRYVDFTFDLGTGAATLR-SSNPISLG--EWHKLRLTR 177
L N G ++ + LN R V F FD+G G L S+ EWH +R
Sbjct: 824 LENMGGPFCQWRRPYVRVELNTSRDVVFAFDIGNGDENLTVHSDDFEFNDDEWHLVRAEI 883
Query: 178 TGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKV 237
+ A L+VD P +L P P P Y + S ++K + F+GC++ +
Sbjct: 884 NVKQARLRVDHRP--WVLRPMPLQTYIWLEYDQ----PLY-VGSAELK-RRPFVGCLRAM 935
Query: 238 LINNHELNILGEA--IQGV--NVV-NCAHPCITQPC-GSGSCVPLYDGYKCVC 284
+N LN+ G A +G N +C HP PC G CV Y Y C C
Sbjct: 936 RLNGVTLNLEGRANASEGTFPNCTGHCTHPRF--PCFHGGRCVERYSYYTCDC 986
Score = 125 (49.1 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 46/172 (26%), Positives = 74/172 (43%)
Query: 89 FNGSSYLRYQGLGEQYLSLLDL-TIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVD 147
F+G + Y+ SL D+ FK E +G+LL H GD++ L L ++
Sbjct: 178 FDGDDAISYRFQRGASQSLWDVFAFSFKTEEKDGLLL---HTEGSQGDYVTLELQGAHLL 234
Query: 148 FTFDLGTGAATLRSSNP-ISLG------EWHKLRLTRTGRHAYLQVDRFPSSQILSPGPF 200
LG+ R + +S G WH +R+ R GR A L +D + +L+ G F
Sbjct: 235 LHMSLGSSPIQPRPGHTTVSAGGVLNDLSWHYVRVDRYGREANLTLDGYVHRFVLN-GDF 293
Query: 201 TQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQ 252
+ GG+ + + +F GCI+ V+ N +NI A+Q
Sbjct: 294 ERLNLENEIFIGGL--VGAARKNLAYRHNFRGCIENVIYNR--INIAEMAVQ 341
Score = 114 (45.2 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 34/138 (24%), Positives = 67/138 (48%)
Query: 109 DLTIVFKAIEPNGILLYNGHRADGVGDFIALYLN-DRYVDFTFDLGTGAATLR-SSNPIS 166
+++ F +LLY + V D++A+ + D + + LGT + ++ P++
Sbjct: 1084 EVSFSFSTSSAPAVLLYV---SSFVRDYMAVLIKEDGTLQLRYQLGTSPYVYQLTTRPVT 1140
Query: 167 LGEWHKLRLTRTGRHAYLQVDRFP-SSQILSPGPFTQXXXXXXXXXGGVPDYNIVSPKVK 225
G+ H + +TR R+ ++QVD FP + Q S +Q G V + ++ P+++
Sbjct: 1141 DGQPHSVNITRVYRNLFIQVDYFPLTEQKFSLLVDSQLDSPKALYLGRVMETGVIDPEIQ 1200
Query: 226 IKSS--FIGCIQKVLINN 241
++ F GC+ V NN
Sbjct: 1201 RYNTPGFSGCLSGVRFNN 1218
Score = 76 (31.8 bits), Expect = 5.3e-10, Sum P(2) = 5.3e-10
Identities = 14/41 (34%), Positives = 20/41 (48%)
Query: 43 LEDKCNKTPCEHGGKCITTPGSSYCLCPL-GFTGDLCQTRL 82
+ D+C+ CEH G+C + C C L G+ G C L
Sbjct: 541 ITDRCSPNMCEHDGRCYQSWDDFICYCELTGYKGVTCHEPL 581
Score = 63 (27.2 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 16/49 (32%), Positives = 20/49 (40%)
Query: 33 NKIKGRSKECLEDKCN--KTPCEHGGKCITTPGSSYCLCPL-GFTGDLC 78
N +G C C + PC HGG+C+ C C L F G C
Sbjct: 949 NASEGTFPNCT-GHCTHPRFPCFHGGRCVERYSYYTCDCDLTAFDGPYC 996
Score = 55 (24.4 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 12/63 (19%), Positives = 25/63 (39%)
Query: 341 IDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGVW 400
+ R +T +GL+L++ + L + G +V ++N+G W
Sbjct: 386 VSFRFRTWDLTGLLLFSRLGDGLGHVELMLSEGQVNVSIAQTGRKKLQFAAGYRLNDGFW 445
Query: 401 HRL 403
H +
Sbjct: 446 HEV 448
>UNIPROTKB|F1PAM8 [details] [associations]
symbol:CNTNAP4 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0030425 "dendrite" evidence=IEA]
[GO:0007155 "cell adhesion" evidence=IEA] InterPro:IPR000421
InterPro:IPR000742 Pfam:PF00008 Pfam:PF00754 PROSITE:PS01286
PROSITE:PS50022 PROSITE:PS50026 SMART:SM00181 SMART:SM00231
INTERPRO:IPR002181 GO:GO:0007165 GO:GO:0030425 GO:GO:0007155
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 InterPro:IPR008979 SUPFAM:SSF49785
InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025 Gene3D:3.90.215.10
InterPro:IPR014716 SMART:SM00186 SUPFAM:SSF56496 PROSITE:PS51406
Pfam:PF02210 GeneTree:ENSGT00560000076804 CTD:85445 OMA:CMRLISI
EMBL:AAEX03004061 RefSeq:XP_536775.2 ProteinModelPortal:F1PAM8
Ensembl:ENSCAFT00000031919 GeneID:479642 KEGG:cfa:479642
Uniprot:F1PAM8
Length = 1309
Score = 180 (68.4 bits), Expect = 5.3e-10, P = 5.3e-10
Identities = 87/328 (26%), Positives = 138/328 (42%)
Query: 64 SSYCLCPLGFTGDLCQTRLDLQVPQFNG-SSYLRYQGL-GEQYLSLLDLTIVFKAIEPNG 121
++Y L PL GD R FN +SYL + GE LS D++ FK +G
Sbjct: 777 AAYKLGPLLCRGD----RSFWNSASFNTEASYLHFPTFHGE--LSA-DVSFFFKTTASSG 829
Query: 122 ILLYNGHRADGVGDFIALYLND-RYVDFTFDLGTGAATLRSSNPISLGE--WHKLRLTRT 178
+ L N G+ DFI + L V F+FD+G G + +P + WH +R+ R
Sbjct: 830 VFLENL----GITDFIRIELRSPAVVTFSFDVGNGPFEISVQSPTHFNDNQWHHVRVERN 885
Query: 179 GRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVL 238
+ A L+VD Q+L P TQ + V + F+GCI+ +
Sbjct: 886 MKEASLRVD-----QLL---PKTQPAPADGHVLLQLNSQLFVGGTATRQRGFLGCIRSLQ 937
Query: 239 INNHELNILGEA--IQGVNVVNCAHPCIT--QPC-GSGSCVPLYDGYKCVCTQSCKESHL 293
+N L++ A GV C C + + C G C G+ C CT S
Sbjct: 938 LNGMSLDLEERAKVTPGVEP-GCRGHCSSYGKLCQNGGKCREKLSGFSCDCTFSAYTGPF 996
Query: 294 -TEVMCASFDHGASFLHYLDPEIIHSSGLLHYKFQLHVDFRITGYEFNIDMRIKTSSSSG 352
++ + A F G+S ++ S + H D +++ E I +T+ +
Sbjct: 997 CSKEISAYFGSGSSLIYNFQENYSLSKNSSSHAASFHGDMKLSR-EM-IKFSFRTTRAPS 1054
Query: 353 LILWTGSSQSKDFLALGI-HNGYAHVMY 379
L+L+ SS K++L++ I NG + Y
Sbjct: 1055 LLLYV-SSFYKEYLSVIIAKNGSLQIRY 1081
Score = 132 (51.5 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 67/282 (23%), Positives = 114/282 (40%)
Query: 78 CQTRLDLQVPQFNGSSYLRYQGL-GEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDF 136
C + V + SYL G GE LS + F+ G+LL++ + G
Sbjct: 364 CSQSQSVPVTFLSPRSYLALPGFSGEDELSA---SFQFRTWNKAGLLLFSELQLVSGG-- 418
Query: 137 IALYLNDRYVDFT-FDLGTGAATLRSSNPISL--GEWHKLRLTRTGRHAYLQVDRFPSSQ 193
+ L+LND + + G + + ++ + L G+WH + L+ H + VD +S
Sbjct: 419 LLLFLNDGKLKLNLYQPGRLPSDI-TAGVVGLNDGQWHSISLSARRNHLSMVVDGQVASA 477
Query: 194 ILSPGPFTQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQG 253
S GP Q GG PD + S F GC++ + I+N ++++ QG
Sbjct: 478 ASSLGP-EQLYSGGTYYFGGCPDNSFGSKCKNPLDGFQGCMRLISISNRIVDLISVQ-QG 535
Query: 254 -------VNVVNCA--HPCITQPCG-SGSCVPLYDGYKCVCTQS------CKESHLTEVM 297
+ + +C C+ C G C ++ + C C + C S + E
Sbjct: 536 SLGNFSDLQIDSCGITDRCLPNYCEHGGECSQSWNTFHCNCANTGYTGATCHNS-IYEQS 594
Query: 298 CASFDH--GASFLHYLDPEIIHSSGLLHYKFQLHVDFRITGY 337
C S+ H S +Y+D + SG L F L+ + T +
Sbjct: 595 CESYKHRGNTSGFYYIDSD---GSGPLE-PFLLYCNMTETAW 632
Score = 45 (20.9 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 16/71 (22%), Positives = 28/71 (39%)
Query: 340 NIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQ--TKINN 397
++ KT++SSG+ L + DF+ + + + Q T N+
Sbjct: 817 DVSFFFKTTASSGVFL--ENLGITDFIRIELRSPAVVTFSFDVGNGPFEISVQSPTHFND 874
Query: 398 GVWHRLTVHRN 408
WH + V RN
Sbjct: 875 NQWHHVRVERN 885
>FB|FBgn0001075 [details] [associations]
symbol:ft "fat" species:7227 "Drosophila melanogaster"
[GO:0005887 "integral to plasma membrane" evidence=ISS;NAS]
[GO:0000904 "cell morphogenesis involved in differentiation"
evidence=IMP] [GO:0016339 "calcium-dependent cell-cell adhesion"
evidence=ISS;NAS] [GO:0008283 "cell proliferation" evidence=IMP]
[GO:0007446 "imaginal disc growth" evidence=IMP] [GO:0018149
"peptide cross-linking" evidence=IPI] [GO:0016021 "integral to
membrane" evidence=TAS] [GO:0007156 "homophilic cell adhesion"
evidence=IEA;ISS] [GO:0050839 "cell adhesion molecule binding"
evidence=ISS;IDA] [GO:0004872 "receptor activity" evidence=ISS]
[GO:0045571 "negative regulation of imaginal disc growth"
evidence=IMP;TAS] [GO:0045317 "equator specification"
evidence=IMP;NAS] [GO:0042067 "establishment of ommatidial planar
polarity" evidence=IGI;IMP;TAS] [GO:0016318 "ommatidial rotation"
evidence=TAS] [GO:0001737 "establishment of imaginal disc-derived
wing hair orientation" evidence=IMP;TAS] [GO:0045198 "establishment
of epithelial cell apical/basal polarity" evidence=IMP] [GO:0007164
"establishment of tissue polarity" evidence=IMP;NAS] [GO:0030178
"negative regulation of Wnt receptor signaling pathway"
evidence=TAS] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0040008
"regulation of growth" evidence=IGI;IMP] [GO:0045926 "negative
regulation of growth" evidence=IMP] [GO:0001736 "establishment of
planar polarity" evidence=IGI;IMP] [GO:0007476 "imaginal
disc-derived wing morphogenesis" evidence=IMP] [GO:0048105
"establishment of body hair planar orientation" evidence=IMP]
[GO:0016337 "cell-cell adhesion" evidence=IMP] [GO:0008285
"negative regulation of cell proliferation" evidence=IMP]
[GO:0035329 "hippo signaling cascade" evidence=IGI] [GO:0046620
"regulation of organ growth" evidence=IGI] [GO:0035159 "regulation
of tube length, open tracheal system" evidence=IMP] [GO:0090176
"microtubule cytoskeleton organization involved in establishment of
planar polarity" evidence=IMP] InterPro:IPR000742
InterPro:IPR002126 InterPro:IPR015919 InterPro:IPR020894
Pfam:PF00008 Pfam:PF00028 PRINTS:PR00205 PROSITE:PS00232
PROSITE:PS50026 PROSITE:PS50268 SMART:SM00112 SMART:SM00181
GO:GO:0035329 GO:GO:0008285 GO:GO:0005887 EMBL:AE014134
GO:GO:0008283 GO:GO:0030054 GO:GO:0005509 GO:GO:0004872
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 eggNOG:NOG12793 GO:GO:0050839 InterPro:IPR001791
Pfam:PF00054 SMART:SM00282 PROSITE:PS50025 GO:GO:0016339
HOGENOM:HOG000107041 GO:GO:0007156 GO:GO:0018149 GO:GO:0030178
GO:GO:0045317 GO:GO:0035159 SUPFAM:SSF49313 Gene3D:2.60.40.60
GeneTree:ENSGT00700000104207 GO:GO:0016318 Pfam:PF02210
GO:GO:0001737 GO:GO:0045198 GO:GO:0048105 GO:GO:0000904
GO:GO:0007446 GO:GO:0090176 GO:GO:0045571 KO:K16669 OMA:GKMCESS
EMBL:M80537 PIR:A41087 RefSeq:NP_477497.1 UniGene:Dm.293
ProteinModelPortal:P33450 SMR:P33450 DIP:DIP-21094N IntAct:P33450
MINT:MINT-1746562 STRING:P33450 PaxDb:P33450 PRIDE:P33450
EnsemblMetazoa:FBtr0077478 GeneID:33627 KEGG:dme:Dmel_CG3352
CTD:33627 FlyBase:FBgn0001075 InParanoid:P33450 OrthoDB:EOG4D7WMG
PhylomeDB:P33450 GenomeRNAi:33627 NextBio:784506 Bgee:P33450
GermOnline:CG3352 Uniprot:P33450
Length = 5147
Score = 186 (70.5 bits), Expect = 6.0e-10, Sum P(5) = 6.0e-10
Identities = 50/159 (31%), Positives = 76/159 (47%)
Query: 36 KGRSKECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQFNGSSYL 95
+G E + D C PC HGG C++ C C G G C+ R F SY+
Sbjct: 4085 RGNQCESVSDSCRPNPCLHGGLCVSLKPGYKCNCTPGRYGRHCE-RFSYG---FQPLSYM 4140
Query: 96 RYQGLGEQYLSLLDLTIVFKAIEPNGILLYN-GHRADGVGDFIALYL-NDRYVDFTFDLG 153
+ L ++ D++IVF +PN +LLYN G ++ G DF+A+ L + R +
Sbjct: 4141 TFPALD---VTTNDISIVFATTKPNSLLLYNYGMQSGGRSDFLAIELVHGRAYFSSGGAR 4197
Query: 154 TGAATLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSS 192
T +T+ + ++ G WHK+ TR GR L V + S
Sbjct: 4198 TAISTVIAGRNLADGGWHKVTATRNGRVMSLSVAKCADS 4236
Score = 60 (26.2 bits), Expect = 6.0e-10, Sum P(5) = 6.0e-10
Identities = 18/79 (22%), Positives = 35/79 (44%)
Query: 341 IDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTK-INNGV 399
+ M +T G IL+ ++Q F +L + G V Y +T +N+G
Sbjct: 4428 LSMLFRTYKDQGQILYAATNQM--FTSLSLREGRL-VYYSKQHLTINMTVQETSTLNDGK 4484
Query: 400 WHRLTVH---RNFMVVMHG 415
WH +++ R+ +++ G
Sbjct: 4485 WHNVSLFSESRSLRLIVDG 4503
Score = 57 (25.1 bits), Expect = 6.0e-10, Sum P(5) = 6.0e-10
Identities = 16/61 (26%), Positives = 25/61 (40%)
Query: 231 IGCIQKVLINNHELNI---LGEA--IQGVNVVNCAHPCITQPCG--SGSCVPLYDGYKCV 283
+GC+ V I LN+ L + + G N C + CG +G C+ + C
Sbjct: 4292 VGCLHSVHIGGRALNLSLPLQQKGILAGCNRQACQPALAAERCGGFAGQCIDRWSSSLCQ 4351
Query: 284 C 284
C
Sbjct: 4352 C 4352
Score = 40 (19.1 bits), Expect = 6.0e-10, Sum P(5) = 6.0e-10
Identities = 7/17 (41%), Positives = 12/17 (70%)
Query: 487 YHHSFKGWISNLILSND 503
+ SF+G +S L+ S+D
Sbjct: 5047 FESSFRGSLSTLVASDD 5063
Score = 37 (18.1 bits), Expect = 6.0e-10, Sum P(5) = 6.0e-10
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 21 HRWDAWIQLNDGNKIKGRS 39
H ++ WI+ DG+ RS
Sbjct: 2774 HLYEIWIEAADGDTPSLRS 2792
>MGI|MGI:1858201 [details] [associations]
symbol:Cntnap1 "contactin associated protein-like 1"
species:10090 "Mus musculus" [GO:0002175 "protein localization to
paranode region of axon" evidence=IMP] [GO:0007010 "cytoskeleton
organization" evidence=IMP] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0008076 "voltage-gated potassium channel complex"
evidence=IDA] [GO:0008088 "axon cargo transport" evidence=IMP]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=ISO] [GO:0017124 "SH3 domain binding"
evidence=ISO] [GO:0030424 "axon" evidence=ISO] [GO:0030913
"paranodal junction assembly" evidence=IMP] [GO:0031175 "neuron
projection development" evidence=IGI] [GO:0033270 "paranode region
of axon" evidence=ISO;IDA] [GO:0048812 "neuron projection
morphogenesis" evidence=IMP] [GO:0050884 "neuromuscular process
controlling posture" evidence=IMP] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] InterPro:IPR000421
InterPro:IPR000742 Pfam:PF00754 PROSITE:PS01285 PROSITE:PS01286
PROSITE:PS50022 PROSITE:PS50026 SMART:SM00181 SMART:SM00231
MGI:MGI:1858201 INTERPRO:IPR002181 GO:GO:0016021 GO:GO:0005886
GO:GO:0007165 GO:GO:0007010 GO:GO:0008088 GO:GO:0050885
GO:GO:0007155 GO:GO:0048812 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
Reactome:REACT_127416 PROSITE:PS01186 InterPro:IPR008979
SUPFAM:SSF49785 InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025
Gene3D:3.90.215.10 InterPro:IPR014716 SUPFAM:SSF56496
PROSITE:PS00514 PROSITE:PS51406 GO:GO:0033270 EMBL:AL590969
Pfam:PF02210 InterPro:IPR003585 SMART:SM00294 GO:GO:0030913
GO:GO:0002175 GO:GO:0050884 HOVERGEN:HBG057718 CTD:8506
eggNOG:NOG291100 HOGENOM:HOG000230964 KO:K07379 OMA:RHDLHYH
OrthoDB:EOG40GCQ0 EMBL:AF039833 IPI:IPI00338983 PIR:T14158
RefSeq:NP_058062.2 UniGene:Mm.474527 ProteinModelPortal:O54991
SMR:O54991 IntAct:O54991 STRING:O54991 PhosphoSite:O54991
PaxDb:O54991 PRIDE:O54991 Ensembl:ENSMUST00000103109 GeneID:53321
KEGG:mmu:53321 GeneTree:ENSGT00560000076804 InParanoid:A2A4K6
NextBio:310125 Bgee:O54991 CleanEx:MM_CNTNAP1 Genevestigator:O54991
GermOnline:ENSMUSG00000017167 Uniprot:O54991
Length = 1385
Score = 154 (59.3 bits), Expect = 6.8e-10, Sum P(2) = 6.8e-10
Identities = 66/233 (28%), Positives = 99/233 (42%)
Query: 64 SSYCLCPLGFTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQYLSLLDLTIVFKAIEPNGIL 123
+ + L PL GD R F+ + LR+ + + LD++ F+ P+G+
Sbjct: 770 AQFFLRPLRCYGD----RNSWNTISFHTGAALRFPPIRANHS--LDVSFYFRTSAPSGVF 823
Query: 124 LYN--GHRADGVGDFIALYLN-DRYVDFTFDLGTGAATLR-SSNPISLG--EWHKLRLTR 177
L N G ++ + LN R V F FD+G G L S+ EWH +R
Sbjct: 824 LENMGGPFCRWRRPYVRVELNTSRDVVFAFDIGNGDENLTVHSDDFEFNDDEWHLVRAEI 883
Query: 178 TGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKV 237
+ A L+VD P +L P P P Y + S ++K + F+GC++ +
Sbjct: 884 NVKQARLRVDHRP--WVLRPMPLQTYIWLVYDQ----PLY-VGSAELK-RRPFVGCLRAM 935
Query: 238 LINNHELNILGEA--IQGV--NVV-NCAHPCITQPC-GSGSCVPLYDGYKCVC 284
+N LN+ G A +G N +C HP PC G CV Y Y C C
Sbjct: 936 RLNGVTLNLEGRANASEGTFPNCTGHCTHPRF--PCFHGGRCVERYSYYTCDC 986
Score = 121 (47.7 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 45/171 (26%), Positives = 73/171 (42%)
Query: 89 FNGSSYLRYQGLGEQYLSLLDL-TIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVD 147
F+G + Y+ SL D+ FK E +G+LL H GD++ L L ++
Sbjct: 178 FDGDDAISYRFQRGASQSLWDVFAFSFKTEEKDGLLL---HTEGSQGDYVTLELQGAHLL 234
Query: 148 FTFDLGTGAATLRSSNP-ISLG------EWHKLRLTRTGRHAYLQVDRFPSSQILSPGPF 200
LG+ R + +SLG WH +R+ R GR A +D + +L+ G F
Sbjct: 235 LHMSLGSSPIQPRPGHTTVSLGGVLNDLSWHYVRVDRYGRDANFTLDGYAHHFVLN-GDF 293
Query: 201 TQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAI 251
+ GG+ + + +F GCI+ V+ N +NI A+
Sbjct: 294 ERLNLENEIFIGGL--VGAARKNLAYRHNFRGCIENVIYNR--INIAEMAV 340
Score = 113 (44.8 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 34/138 (24%), Positives = 67/138 (48%)
Query: 109 DLTIVFKAIEPNGILLYNGHRADGVGDFIALYLN-DRYVDFTFDLGTGAATLR-SSNPIS 166
+++ F +LLY + V D++A+ + D + + LGT + ++ P++
Sbjct: 1084 EVSFSFSTNSAPAVLLYV---SSFVRDYMAVLIKEDGTLQLRYQLGTSPYVYQLTTRPVT 1140
Query: 167 LGEWHKLRLTRTGRHAYLQVDRFP-SSQILSPGPFTQXXXXXXXXXGGVPDYNIVSPKVK 225
G+ H + +TR R+ ++QVD FP + Q S +Q G V + ++ P+++
Sbjct: 1141 DGQPHSVNITRVYRNLFIQVDYFPLTEQKFSLLVDSQLDSPKALYLGRVMETGVIDPEIQ 1200
Query: 226 IKSS--FIGCIQKVLINN 241
++ F GC+ V NN
Sbjct: 1201 RYNTPGFSGCLSGVRFNN 1218
Score = 76 (31.8 bits), Expect = 6.8e-10, Sum P(2) = 6.8e-10
Identities = 14/41 (34%), Positives = 20/41 (48%)
Query: 43 LEDKCNKTPCEHGGKCITTPGSSYCLCPL-GFTGDLCQTRL 82
+ D+C+ CEH G+C + C C L G+ G C L
Sbjct: 541 ITDRCSPNMCEHDGRCYQSWDDFICYCELTGYKGVTCHEPL 581
Score = 63 (27.2 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 16/49 (32%), Positives = 20/49 (40%)
Query: 33 NKIKGRSKECLEDKCN--KTPCEHGGKCITTPGSSYCLCPL-GFTGDLC 78
N +G C C + PC HGG+C+ C C L F G C
Sbjct: 949 NASEGTFPNCT-GHCTHPRFPCFHGGRCVERYSYYTCDCDLTAFDGPYC 996
Score = 55 (24.4 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 12/63 (19%), Positives = 25/63 (39%)
Query: 341 IDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGVW 400
+ R +T +GL+L++ + L + G +V ++N+G W
Sbjct: 386 VSFRFRTWDLTGLLLFSHLGDGLGHVELMLSEGQVNVSIAQTGRKKLQFAAGYRLNDGFW 445
Query: 401 HRL 403
H +
Sbjct: 446 HEV 448
>UNIPROTKB|E9PQ73 [details] [associations]
symbol:FAT3 "Protocadherin Fat 3" species:9606 "Homo
sapiens" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007156 "homophilic
cell adhesion" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR002126 InterPro:IPR015919 InterPro:IPR018097
InterPro:IPR020894 Pfam:PF00028 Pfam:PF07645 PRINTS:PR00205
PROSITE:PS00232 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS50268
SMART:SM00112 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0016021 GO:GO:0005886 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186
InterPro:IPR001791 SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025
GO:GO:0007156 SUPFAM:SSF49313 Gene3D:2.60.40.60 Pfam:PF02210
EMBL:AP000722 EMBL:AP000805 EMBL:AP002514 EMBL:AP003171
EMBL:AP003718 IPI:IPI00847978 HGNC:HGNC:23112 ChiTaRS:FAT3
PRIDE:E9PQ73 Ensembl:ENST00000525166 ArrayExpress:E9PQ73
Bgee:E9PQ73 Uniprot:E9PQ73
Length = 4439
Score = 184 (69.8 bits), Expect = 7.2e-10, Sum P(2) = 7.2e-10
Identities = 74/262 (28%), Positives = 110/262 (41%)
Query: 45 DKCNKTPCEHGGKCITTPGSS---YCLCPLGFTGDLCQTRLDLQVPQFNGSSYLRYQGLG 101
D C + PC +C++ S C CP G G+ C L F G+SY++Y+ L
Sbjct: 3647 DPCVEKPCPGDMQCVSYEASRRPFLCQCPPGKLGE-CSGHTSLS---FAGNSYIKYR-LS 3701
Query: 102 EQYLSL-LDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLR 160
E L + + ++ NGI++Y RA+ I L + D + F D G+G L
Sbjct: 3702 ENSKEEDFKLALRLRTLQSNGIIMYT--RANPC---IILKIVDGKLWFQLDCGSGPGILG 3756
Query: 161 -SSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGG-VPDYN 218
S ++ G WH + L L +D + +P F G V N
Sbjct: 3757 ISGRAVNDGSWHSVFLELNRNFTSLSLDDSYVERRRAPLYFQTLSTESSIYFGALVQADN 3816
Query: 219 IVS---PKV-KIKSSFIGCIQKVLINNHELNILGEAIQGVNVVN-------CA-HP--CI 264
I S +V ++ S F GC+ V++NN+EL + + VV C +P C
Sbjct: 3817 IRSLTDTRVTQVLSGFQGCLDSVILNNNELPLQNKRSSFAEVVGLTELKLGCVLYPDACK 3876
Query: 265 TQPCG-SGSCVPLYDG-YKCVC 284
PC GSC L G Y+C C
Sbjct: 3877 RSPCQHGGSCTGLPSGGYQCTC 3898
Score = 55 (24.4 bits), Expect = 7.2e-10, Sum P(2) = 7.2e-10
Identities = 15/37 (40%), Positives = 18/37 (48%)
Query: 263 CITQPC-GSGSCVPLYDGYKCVCTQSCKESHLTEVMC 298
C PC GSC P+ G +C +CK LT V C
Sbjct: 3914 CFPNPCRNGGSCDPI--GNTFIC--NCKAG-LTGVTC 3945
>ZFIN|ZDB-GENE-070206-9 [details] [associations]
symbol:nrxn3a "neurexin 3a" species:7955 "Danio
rerio" [GO:0007268 "synaptic transmission" evidence=IEA]
[GO:0007416 "synapse assembly" evidence=IEA] [GO:0004872 "receptor
activity" evidence=IEA] [GO:0001525 "angiogenesis" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR000742
InterPro:IPR027149 PROSITE:PS50026 SMART:SM00181
ZFIN:ZDB-GENE-070206-9 GO:GO:0016021 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025 Pfam:PF02210
InterPro:IPR003585 SMART:SM00294 GeneTree:ENSGT00560000076996
PANTHER:PTHR10127:SF405 EMBL:CR536614 EMBL:CR381576 EMBL:BX571723
EMBL:CABZ01007637 EMBL:CABZ01007638 EMBL:CABZ01059373
EMBL:CABZ01059374 EMBL:CABZ01059375 EMBL:CABZ01059376
EMBL:CABZ01059377 EMBL:CR936419 EMBL:CT573309 IPI:IPI00829166
Ensembl:ENSDART00000088179 Bgee:F1QYQ7 Uniprot:F1QYQ7
Length = 1697
Score = 180 (68.4 bits), Expect = 7.3e-10, P = 7.3e-10
Identities = 106/449 (23%), Positives = 168/449 (37%)
Query: 91 GSSYLRYQGLGEQYL-----SLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRY 145
G + QG +YL + DL+ FK ++LY G DF+ L + +
Sbjct: 23 GLEFTGLQGQWARYLRWDASTRSDLSFQFKTDVSTALILYFDD--GGFCDFLQLMVVEGK 80
Query: 146 VDFTFDLGTGAATLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXX 205
+ F + T+ S ++ WH L+R L +D S+ P Q
Sbjct: 81 LQLQFSIDCAETTVVSDKRVNDSSWHSATLSRYNLRTVLGLDGV--SKWAEVRPLRQYMK 138
Query: 206 XXXXXX-GGVP-DYNI---VSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNCA 260
GGVP D I P VK F G I+++ N+ E +L Q V + +
Sbjct: 139 IVSDLFLGGVPQDIRISVLTLPTVKDLPPFKGIIRELKYNSKEPILLSS--QRVRM-DIE 195
Query: 261 HPCITQPCGSGSCVPLYDGYK-CVCTQS------CKESH-----LTEVMCASFDHGASFL 308
C+ PC +G + DG C C+++ C E +M A G +
Sbjct: 196 GICMENPCENGGTCSVVDGEPLCDCSKTEYVGRFCNEEANNIPGFAHMMMADQAKGKA-- 253
Query: 309 HYLDPEIIHSSGLLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLAL 368
+ + G + + L + I I + KT +GLIL TG +S D++ L
Sbjct: 254 --REENVATFRGSEFFCYDLSQN-PIQSSSDEITLSFKTWQRNGLILHTG--KSADYVNL 308
Query: 369 GIHNGYAHVMYXXXXXXXXXXXXQT--KINNGVWHRLTVHRNFMVVMH-GSSHTRSNKSS 425
+ +G ++ K N+ WH + V RN H G H NK
Sbjct: 309 ALKDGAVSLVINLGSGAFEAIVEPVNGKFNDNSWHDVKVTRNLR--QHSGIGHAMVNK-- 364
Query: 426 KIEFKCLSIQRLHRTGKQCLIRIDTD--YSMQSISGGKFEQLNTDSGLYVGGVEDIEELT 483
LH CL+ I D + + + L +D YVGG +L
Sbjct: 365 -----------LH-----CLVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLP 408
Query: 484 RSKYHHSFKGWISNLILSNDYQVKLPLSR 512
S ++F G + ++ N+ ++L LSR
Sbjct: 409 GSPVSNNFMGCLKEVVYKNN-DIRLELSR 436
Score = 153 (58.9 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 79/336 (23%), Positives = 138/336 (41%)
Query: 92 SSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFD 151
+SYL L + Y S+ L FK +G +L+N DG DFIA+ L Y+ + F+
Sbjct: 894 NSYLSLATL-QAYTSM-HLFFQFKTTSADGFILFNS--GDG-SDFIAVELVKGYIHYVFN 948
Query: 152 LGTGAATLRSSNPISL--GEWHKLRLTRTGRHAY-LQVDRFPSSQILSPGPFTQXXXXXX 208
LG G ++ ++ +L +WH + +TR + + L+VD SQ+++ G
Sbjct: 949 LGNGPNVIKGNSERALHDNQWHNVVITRDNSNVHTLKVDAKAVSQVVN-GAKNLDLKGDL 1007
Query: 209 XXXGGVPD-YNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAI-------QGVNV---- 256
G P+ YN + V + F GC+ V +N +++ +A+ +G V
Sbjct: 1008 FIAGLGPNMYNNLPKLVASREGFKGCLASVDLNGRLPDLINDALFRSGQIERGCEVGFTK 1067
Query: 257 VNCAHPCITQPCGSGSCVPLYDGYKCVCTQSCKESHLTEVMCASFDHGASFLHYLDPEII 316
+ P T C SC + G +C Q E++ + S+ G H DP
Sbjct: 1068 ADLKGPSTT--CQEDSCANM--G---ICIQQW-ENYTCDCSMTSYT-GT---HCNDPGTT 1115
Query: 317 H----SSGLLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSK-DFLALGIH 371
+ GL+ + + + R + + + TS G+++ S+ D+L L I+
Sbjct: 1116 YIFGKGGGLISFNWPANE--RPSTRTDRLTVGFSTSLKDGILIRIDSAPGLGDYLMLHIN 1173
Query: 372 NGYAHVMYXXXXXXXXXXXXQTKINNGVWHRLTVHR 407
+ Y K+N G H + R
Sbjct: 1174 QNQIILTYNIDTIYITLQDLTVKMNKGKVHLIRFKR 1209
Score = 144 (55.7 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 54/232 (23%), Positives = 103/232 (44%)
Query: 114 FKAIEPNGILLY-NG---HRADGVG------DFIALYLNDRYVDFTFDLGTGAATLRSS- 162
F+ EPNG++L+ +G R D DF A+ L D + D+G+G ++++
Sbjct: 490 FRTTEPNGLILFTHGKPQERKDARSQKNTKVDFFAVELLDGSLYLLLDMGSGTIKVKATQ 549
Query: 163 NPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDY--NIV 220
N ++ G W+ + + R GR + V+ + + G GG+PD +++
Sbjct: 550 NKVNDGAWYHVDIQRDGRSGTISVNS-RRTPFTASGENEILDLEGDMYLGGLPDSRGSLI 608
Query: 221 SPK----VKIKSSFIGCIQKVLINNHELNI--LGEAIQGVNVV-NC----AHPCITQPC- 268
P + ++GCI+ + I+ +I + EA G + +C C + PC
Sbjct: 609 LPTELWTAMLNYGYVGCIRDLFIDGRSKDIRQIAEAQNGAGIKPSCNKMSGKQCDSYPCK 668
Query: 269 GSGSCVPLYDGYKCVCTQSCKESHLTE--VMCASFDHGASFLHYLDPEIIHS 318
G C ++ + C CT + S E S+D G+ ++ + P ++H+
Sbjct: 669 NKGLCKEGWNRFICDCTGTGYWSRTCEREASILSYD-GSMYMKVVMPTVMHT 719
Score = 75 (31.5 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 15/48 (31%), Positives = 21/48 (43%)
Query: 43 LEDKCNKTPCEHGGKCITTPGSSYCLCP-LGFTGDLCQTRLDLQVPQF 89
+E C + PCE+GG C G C C + G C + +P F
Sbjct: 194 IEGICMENPCENGGTCSVVDGEPLCDCSKTEYVGRFCNEEAN-NIPGF 240
Score = 38 (18.4 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 6/10 (60%), Positives = 9/10 (90%)
Query: 11 DDWNTVRVFR 20
++W+TVRV R
Sbjct: 789 NEWHTVRVIR 798
>UNIPROTKB|Q8TDW7 [details] [associations]
symbol:FAT3 "Protocadherin Fat 3" species:9606 "Homo
sapiens" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007156 "homophilic
cell adhesion" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR002126 InterPro:IPR015919 InterPro:IPR018097
InterPro:IPR020894 Pfam:PF00028 Pfam:PF07645 PRINTS:PR00205
PROSITE:PS00232 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS50268
SMART:SM00112 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0016021 GO:GO:0007275 GO:GO:0005886 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 eggNOG:NOG12793 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 GO:GO:0007156 HSSP:P46531
SUPFAM:SSF49313 Gene3D:2.60.40.60 Pfam:PF02210 KO:K16506
HOGENOM:HOG000046499 HOVERGEN:HBG005641 EMBL:AP000722 EMBL:AP000805
EMBL:AP002514 EMBL:AP003171 EMBL:AP003718 EMBL:BC016722
EMBL:AB076400 IPI:IPI00847978 IPI:IPI00888216 IPI:IPI00973508
RefSeq:NP_001008781.2 UniGene:Hs.98523 ProteinModelPortal:Q8TDW7
SMR:Q8TDW7 STRING:Q8TDW7 PhosphoSite:Q8TDW7 DMDM:172045818
PaxDb:Q8TDW7 PRIDE:Q8TDW7 Ensembl:ENST00000298047
Ensembl:ENST00000409404 GeneID:120114 KEGG:hsa:120114
UCSC:uc001pdj.4 CTD:120114 GeneCards:GC11P092164 HGNC:HGNC:23112
HPA:HPA026878 MIM:612483 neXtProt:NX_Q8TDW7 PharmGKB:PA134962612
InParanoid:Q8TDW7 OMA:DNGWMVT OrthoDB:EOG4CNQQ3 ChiTaRS:FAT3
GenomeRNAi:120114 NextBio:80524 ArrayExpress:Q8TDW7 Bgee:Q8TDW7
CleanEx:HS_FAT3 Genevestigator:Q8TDW7 Uniprot:Q8TDW7
Length = 4589
Score = 184 (69.8 bits), Expect = 7.7e-10, Sum P(2) = 7.7e-10
Identities = 74/262 (28%), Positives = 110/262 (41%)
Query: 45 DKCNKTPCEHGGKCITTPGSS---YCLCPLGFTGDLCQTRLDLQVPQFNGSSYLRYQGLG 101
D C + PC +C++ S C CP G G+ C L F G+SY++Y+ L
Sbjct: 3797 DPCVEKPCPGDMQCVSYEASRRPFLCQCPPGKLGE-CSGHTSLS---FAGNSYIKYR-LS 3851
Query: 102 EQYLSL-LDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLR 160
E L + + ++ NGI++Y RA+ I L + D + F D G+G L
Sbjct: 3852 ENSKEEDFKLALRLRTLQSNGIIMYT--RANPC---IILKIVDGKLWFQLDCGSGPGILG 3906
Query: 161 -SSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGG-VPDYN 218
S ++ G WH + L L +D + +P F G V N
Sbjct: 3907 ISGRAVNDGSWHSVFLELNRNFTSLSLDDSYVERRRAPLYFQTLSTESSIYFGALVQADN 3966
Query: 219 IVS---PKV-KIKSSFIGCIQKVLINNHELNILGEAIQGVNVVN-------CA-HP--CI 264
I S +V ++ S F GC+ V++NN+EL + + VV C +P C
Sbjct: 3967 IRSLTDTRVTQVLSGFQGCLDSVILNNNELPLQNKRSSFAEVVGLTELKLGCVLYPDACK 4026
Query: 265 TQPCG-SGSCVPLYDG-YKCVC 284
PC GSC L G Y+C C
Sbjct: 4027 RSPCQHGGSCTGLPSGGYQCTC 4048
Score = 55 (24.4 bits), Expect = 7.7e-10, Sum P(2) = 7.7e-10
Identities = 15/37 (40%), Positives = 18/37 (48%)
Query: 263 CITQPC-GSGSCVPLYDGYKCVCTQSCKESHLTEVMC 298
C PC GSC P+ G +C +CK LT V C
Sbjct: 4064 CFPNPCRNGGSCDPI--GNTFIC--NCKAG-LTGVTC 4095
>RGD|621254 [details] [associations]
symbol:Fat1 "FAT tumor suppressor homolog 1 (Drosophila)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005886 "plasma membrane" evidence=ISO]
[GO:0005911 "cell-cell junction" evidence=ISO] [GO:0007015 "actin
filament organization" evidence=ISO] [GO:0007163 "establishment or
maintenance of cell polarity" evidence=ISO] [GO:0016337 "cell-cell
adhesion" evidence=ISO] [GO:0030027 "lamellipodium" evidence=ISO]
[GO:0030054 "cell junction" evidence=ISO] [GO:0030175 "filopodium"
evidence=ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISO] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR002126 InterPro:IPR015919 InterPro:IPR018097
InterPro:IPR020894 Pfam:PF00008 Pfam:PF00028 Pfam:PF07645
PRINTS:PR00205 PROSITE:PS00232 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS50268 SMART:SM00112 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 RGD:621254 GO:GO:0016021 GO:GO:0005886
GO:GO:0005634 GO:GO:0048471 GO:GO:0031252 GO:GO:0016477
GO:GO:0005509 GO:GO:0005911 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 GO:GO:0007156 SUPFAM:SSF49313
Gene3D:2.60.40.60 Pfam:PF02210 KO:K16506 HSSP:P01132 CTD:2195
HOGENOM:HOG000046499 HOVERGEN:HBG005641 EMBL:AF100960
IPI:IPI00203286 RefSeq:NP_114007.1 UniGene:Rn.8633
ProteinModelPortal:Q9WU10 IntAct:Q9WU10 STRING:Q9WU10
PhosphoSite:Q9WU10 GeneID:83720 KEGG:rno:83720 InParanoid:Q9WU10
NextBio:616293 Genevestigator:Q9WU10 Uniprot:Q9WU10
Length = 4589
Score = 182 (69.1 bits), Expect = 7.9e-10, Sum P(2) = 7.9e-10
Identities = 61/257 (23%), Positives = 110/257 (42%)
Query: 47 CNKTPCEHGGKCITTPGSS-Y-CLCPLGFTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQY 104
C PC G +C+ P Y C+CP G C + F GSS+++Y+ + +
Sbjct: 3795 CEDNPCPAGSECVADPREEKYSCVCPGGGFAK-CPGSSSIT---FTGSSFVKYRLMENEN 3850
Query: 105 LSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLR-SSN 163
+ LT+ + + +++Y A G D+ L ++ + + FD G+G + S
Sbjct: 3851 RLEMKLTMRLRTYSSHAVVMY----ARGT-DYSILEIHTGRLQYKFDCGSGPGIVSVQSI 3905
Query: 164 PISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGG-VPDYNIVSP 222
++ G+WH + L G +A L +D ++ +PG GG +
Sbjct: 3906 QVNDGQWHAVSLEVEGNYAKLVLDEVHTASGTAPGALKTLNLDNYVIFGGHLRQQGTKHG 3965
Query: 223 K-VKIKSSFIGCIQKVLINNHELNILGEAIQGVNV---VNCAHPCI---TQPCGS----- 270
+ ++ + F GC+ + +N EL + + ++ V+ AH C+ T+ C S
Sbjct: 3966 RNTQVANGFRGCMDSIYLNGQELPLNNKPRAYAHIEEWVDLAHGCLLTATEDCSSNPCQN 4025
Query: 271 -GSCVPL-YDGYKCVCT 285
G C P GY C C+
Sbjct: 4026 GGVCNPSPTGGYYCKCS 4042
Score = 57 (25.1 bits), Expect = 7.9e-10, Sum P(2) = 7.9e-10
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 263 CITQPCGSGS-CVPLYDGYKCVCTQSCKESH 292
C PC +G+ C + Y C C+Q + H
Sbjct: 4132 CAGNPCRNGALCENTHGSYHCNCSQEYRGKH 4162
Score = 49 (22.3 bits), Expect = 5.3e-09, Sum P(2) = 5.3e-09
Identities = 9/23 (39%), Positives = 11/23 (47%)
Query: 263 CITQPC-GSGSCVPLYDGYKCVC 284
C +PC G+C DG C C
Sbjct: 4094 CKDEPCKNGGTCFDSLDGAVCQC 4116
Score = 43 (20.2 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 261 HPCITQPC-GSGSCVP-----------LYDGYKCVCTQSCKE 290
+PC + PC G+C+ LY G +C + CK+
Sbjct: 4055 NPCSSNPCLYGGTCMVDNGGFVCQCRGLYTGQRCQLSPYCKD 4096
>UNIPROTKB|F1LR23 [details] [associations]
symbol:Fat1 "Protein Fat1" species:10116 "Rattus
norvegicus" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007156 "homophilic
cell adhesion" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR002126 InterPro:IPR015919 InterPro:IPR018097
InterPro:IPR020894 Pfam:PF00008 Pfam:PF00028 Pfam:PF07645
PRINTS:PR00205 PROSITE:PS00232 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS50268 SMART:SM00112 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 RGD:621254 GO:GO:0016021 GO:GO:0005886
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 GO:GO:0007156 SUPFAM:SSF49313
Gene3D:2.60.40.60 Pfam:PF02210 OMA:PYEAFIV IPI:IPI00949323
Ensembl:ENSRNOT00000046467 ArrayExpress:F1LR23 Uniprot:F1LR23
Length = 4589
Score = 182 (69.1 bits), Expect = 7.9e-10, Sum P(2) = 7.9e-10
Identities = 61/257 (23%), Positives = 110/257 (42%)
Query: 47 CNKTPCEHGGKCITTPGSS-Y-CLCPLGFTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQY 104
C PC G +C+ P Y C+CP G C + F GSS+++Y+ + +
Sbjct: 3795 CEDNPCPAGSECVADPREEKYSCVCPGGGFAK-CPGSSSIT---FTGSSFVKYRLMENEN 3850
Query: 105 LSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLR-SSN 163
+ LT+ + + +++Y A G D+ L ++ + + FD G+G + S
Sbjct: 3851 RLEMKLTMRLRTYSSHAVVMY----ARGT-DYSILEIHTGRLQYKFDCGSGPGIVSVQSI 3905
Query: 164 PISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGG-VPDYNIVSP 222
++ G+WH + L G +A L +D ++ +PG GG +
Sbjct: 3906 QVNDGQWHAVSLEVEGNYAKLVLDEVHTASGTAPGALKTLNLDNYVIFGGHLRQQGTKHG 3965
Query: 223 K-VKIKSSFIGCIQKVLINNHELNILGEAIQGVNV---VNCAHPCI---TQPCGS----- 270
+ ++ + F GC+ + +N EL + + ++ V+ AH C+ T+ C S
Sbjct: 3966 RNTQVANGFRGCMDSIYLNGQELPLNNKPRAYAHIEEWVDLAHGCLLTATEDCSSNPCQN 4025
Query: 271 -GSCVPL-YDGYKCVCT 285
G C P GY C C+
Sbjct: 4026 GGVCNPSPTGGYYCKCS 4042
Score = 57 (25.1 bits), Expect = 7.9e-10, Sum P(2) = 7.9e-10
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 263 CITQPCGSGS-CVPLYDGYKCVCTQSCKESH 292
C PC +G+ C + Y C C+Q + H
Sbjct: 4132 CAGNPCRNGALCENTHGSYHCNCSQEYRGKH 4162
Score = 49 (22.3 bits), Expect = 5.3e-09, Sum P(2) = 5.3e-09
Identities = 9/23 (39%), Positives = 11/23 (47%)
Query: 263 CITQPC-GSGSCVPLYDGYKCVC 284
C +PC G+C DG C C
Sbjct: 4094 CKDEPCKNGGTCFDSLDGAVCQC 4116
Score = 43 (20.2 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 261 HPCITQPC-GSGSCVP-----------LYDGYKCVCTQSCKE 290
+PC + PC G+C+ LY G +C + CK+
Sbjct: 4055 NPCSSNPCLYGGTCMVDNGGFVCQCRGLYTGQRCQLSPYCKD 4096
>UNIPROTKB|G3V9W9 [details] [associations]
symbol:Fat1 "RCG59113" species:10116 "Rattus norvegicus"
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005911 "cell-cell junction" evidence=IEA] [GO:0007015 "actin
filament organization" evidence=IEA] [GO:0007156 "homophilic cell
adhesion" evidence=IEA] [GO:0007163 "establishment or maintenance
of cell polarity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030027 "lamellipodium" evidence=IEA] [GO:0030175
"filopodium" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR002126 InterPro:IPR015919 InterPro:IPR018097
InterPro:IPR020894 Pfam:PF00008 Pfam:PF00028 Pfam:PF07645
PRINTS:PR00205 PROSITE:PS00232 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS50268 SMART:SM00112 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 RGD:621254 GO:GO:0016021 GO:GO:0005886
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 GO:GO:0007156 SUPFAM:SSF49313
Gene3D:2.60.40.60 GeneTree:ENSGT00700000104156 Pfam:PF02210
EMBL:CH473995 Ensembl:ENSRNOT00000067486 Uniprot:G3V9W9
Length = 4589
Score = 182 (69.1 bits), Expect = 7.9e-10, Sum P(2) = 7.9e-10
Identities = 61/257 (23%), Positives = 110/257 (42%)
Query: 47 CNKTPCEHGGKCITTPGSS-Y-CLCPLGFTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQY 104
C PC G +C+ P Y C+CP G C + F GSS+++Y+ + +
Sbjct: 3795 CEDNPCPAGSECVADPREEKYSCVCPGGGFAK-CPGSSSIT---FTGSSFVKYRLMENEN 3850
Query: 105 LSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLR-SSN 163
+ LT+ + + +++Y A G D+ L ++ + + FD G+G + S
Sbjct: 3851 RLEMKLTMRLRTYSSHAVVMY----ARGT-DYSILEIHTGRLQYKFDCGSGPGIVSVQSI 3905
Query: 164 PISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGG-VPDYNIVSP 222
++ G+WH + L G +A L +D ++ +PG GG +
Sbjct: 3906 QVNDGQWHAVSLEVEGNYAKLVLDEVHTASGTAPGALKTLNLDNYVIFGGHLRQQGTKHG 3965
Query: 223 K-VKIKSSFIGCIQKVLINNHELNILGEAIQGVNV---VNCAHPCI---TQPCGS----- 270
+ ++ + F GC+ + +N EL + + ++ V+ AH C+ T+ C S
Sbjct: 3966 RNTQVANGFRGCMDSIYLNGQELPLNNKPRAYAHIEEWVDLAHGCLLTATEDCSSNPCQN 4025
Query: 271 -GSCVPL-YDGYKCVCT 285
G C P GY C C+
Sbjct: 4026 GGVCNPSPTGGYYCKCS 4042
Score = 57 (25.1 bits), Expect = 7.9e-10, Sum P(2) = 7.9e-10
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 263 CITQPCGSGS-CVPLYDGYKCVCTQSCKESH 292
C PC +G+ C + Y C C+Q + H
Sbjct: 4132 CAGNPCRNGALCENTHGSYHCNCSQEYRGKH 4162
Score = 49 (22.3 bits), Expect = 5.3e-09, Sum P(2) = 5.3e-09
Identities = 9/23 (39%), Positives = 11/23 (47%)
Query: 263 CITQPC-GSGSCVPLYDGYKCVC 284
C +PC G+C DG C C
Sbjct: 4094 CKDEPCKNGGTCFDSLDGAVCQC 4116
Score = 43 (20.2 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 261 HPCITQPC-GSGSCVP-----------LYDGYKCVCTQSCKE 290
+PC + PC G+C+ LY G +C + CK+
Sbjct: 4055 NPCSSNPCLYGGTCMVDNGGFVCQCRGLYTGQRCQLSPYCKD 4096
>ZFIN|ZDB-GENE-070206-7 [details] [associations]
symbol:nrxn2b "neurexin 2b" species:7955 "Danio
rerio" [GO:0007268 "synaptic transmission" evidence=IEA]
[GO:0007416 "synapse assembly" evidence=IEA] [GO:0004872 "receptor
activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
InterPro:IPR000742 InterPro:IPR027149 PROSITE:PS50026 SMART:SM00181
ZFIN:ZDB-GENE-070206-7 GO:GO:0016021 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025 Pfam:PF02210
InterPro:IPR003585 SMART:SM00294 eggNOG:NOG302266
HOVERGEN:HBG052670 PANTHER:PTHR10127:SF405 EMBL:DQ641430
IPI:IPI00829082 RefSeq:NP_001073453.1 UniGene:Dr.107077
ProteinModelPortal:A1XQX6 SMR:A1XQX6 GeneID:560420 KEGG:dre:560420
CTD:560420 NextBio:20883436 Uniprot:A1XQX6
Length = 1586
Score = 174 (66.3 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 56/206 (27%), Positives = 96/206 (46%)
Query: 93 SYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDL 152
SYL L + Y S+ L FK +G++L+N DG DFI + L +V + FDL
Sbjct: 809 SYLALATL-QAYASM-HLFFQFKTTGSDGLMLFNS--GDG-SDFIVVELVKGFVHYVFDL 863
Query: 153 GTGAATLR--SSNPISLGEWHKLRLTRTGRHAY-LQVDRFPSSQILSPGPFTQXXXXXXX 209
G G + ++ S P++ +WH + ++R + L++D +Q S G +
Sbjct: 864 GNGPSLMKGNSEKPLNDNQWHNVVVSRDTNDVHTLKIDSRTVTQH-SNG--ARNLDLREL 920
Query: 210 XXGGVPD--YNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVN--CAHP--- 262
GGV YN + + + + GC+ + +N ++L +A+ V V+ C P
Sbjct: 921 YIGGVAKSMYNSLPKLIASRDGYQGCLASIDLNGRLPDLLADALHKVGQVDRGCDGPSST 980
Query: 263 CITQPC-GSGSCVPLYDGYKCVCTQS 287
C C G C+ ++G+ C CT +
Sbjct: 981 CSEDSCLHQGVCLQQWEGFSCDCTMT 1006
Score = 152 (58.6 bits), Expect = 9.4e-10, Sum P(2) = 9.4e-10
Identities = 68/289 (23%), Positives = 125/289 (43%)
Query: 114 FKAIEPNGILLYNGHRADGV----------GDFIALYLNDRYVDFTFDLGTGAATLRSSN 163
F+ EP+G+LL++ R G D+ A+ L D ++ D+G+G+ +++SN
Sbjct: 453 FRTSEPSGLLLFSHGRPQGSKETRPGRETKSDYFAMELLDGFLYLLMDMGSGSIKIKASN 512
Query: 164 P-ISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXX-GGVPDYN--- 218
++ GEW + R GR + V+ S S ++ GG+P+
Sbjct: 513 KKVNDGEWCHVDFQREGRRGSISVNS--RSMPFSTNEGSEILDLDSDMYLGGLPEMRQGL 570
Query: 219 IVSPKV---KIKSSFIGCIQKVLINNHELNI--LGEAIQGVNVVN--CAHP----CITQP 267
++ P+V + ++GC++ + I+ ++ L E IQ V+ C C + P
Sbjct: 571 VLPPEVWTALLNYGYVGCVRDLFIDGKSRDVRRLAE-IQSAPGVSSFCTRELQKRCSSAP 629
Query: 268 CGSGS-CVPLYDGYKCVCTQSCKESHLTEVMCA--SFDHGASFLHYLDPEIIHSSGLLHY 324
C +G C ++ Y C CT + E+ S+D G+ +L L P +H+
Sbjct: 630 CANGGQCKEGWNRYICDCTGTGYMGSNCEIEATVLSYD-GSMYLKILLPSTLHTEA---- 684
Query: 325 KFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNG 373
E ++ +R + + GL++ T S +S D L L + G
Sbjct: 685 -------------E-DVSLRFMSQRAYGLLMATTSKESADTLRLELDGG 719
Score = 125 (49.1 bits), Expect = 0.00061, P = 0.00061
Identities = 41/159 (25%), Positives = 71/159 (44%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCPL-GFTGDLCQTRLDLQVPQFN-GSSYLRYQGL-GEQ 103
C++ C H G C+ C C + + G C + F G + + Y ++
Sbjct: 981 CSEDSCLHQGVCLQQWEGFSCDCTMTSYGGSYCSDPGTTYI--FGRGGALITYTWPPNDR 1038
Query: 104 YLSLLD-LTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSS 162
+ D L + F + +L+ A G+GD++ L++ V F++GT + S
Sbjct: 1039 PSTRADRLAVGFSSQLKEAVLV-RVESAKGLGDYLELHIERGRVGVIFNVGTDDIVIEES 1097
Query: 163 NP-ISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPF 200
+S G++H +R TR+G +A LQVD P + G F
Sbjct: 1098 GVMVSDGKYHVVRFTRSGGNATLQVDNLPVIERFPAGNF 1136
Score = 114 (45.2 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 56/224 (25%), Positives = 96/224 (42%)
Query: 43 LEDKCNK-TPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQFNGSSYLRYQGLG 101
LE C+K PC +GG C G C C TR F G Y + + +
Sbjct: 194 LELLCSKQNPCLNGGVCSVQFGEVQCDCS--------HTR-------FRGK-YCK-EPVS 236
Query: 102 EQYLSLLD-LTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGA--AT 158
+ S D +T+ F+ ++ NG++L+ G AD ++ L L V +LG+GA A
Sbjct: 237 DPIQSSTDEITLSFRTLQRNGLMLHTGKSAD----YVNLSLKSGAVWLVINLGSGAFEAL 292
Query: 159 LRSSN-PISLGEWHKLRLTRTGR------HA------YL---QVDRFPSSQILSPGPFTQ 202
+ N + WH +++TR R HA Y+ VD ++ + +T
Sbjct: 293 VEPVNGKFNDNAWHDVKVTRNLRQHSGIGHAMVNKLHYMVTISVDGILTTTGYTQEDYTM 352
Query: 203 XXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNI 246
GG P+ + P + ++F+GC++ V+ N++ +
Sbjct: 353 LGSDDFFYIGGSPNTADL-PGSPVSNNFMGCLKDVVYKNNDFKL 395
Score = 103 (41.3 bits), Expect = 0.00073, Sum P(3) = 0.00073
Identities = 33/129 (25%), Positives = 57/129 (44%)
Query: 43 LEDKCNKTPCEHGGKCITTPGSSYCLCP-LGFTGDLCQTRLDLQVPQFNGSSYLRYQGLG 101
L+ +C+ PC +GG+C C C G+ G C+ ++ V ++GS YL+
Sbjct: 621 LQKRCSSAPCANGGQCKEGWNRYICDCTGTGYMGSNCE--IEATVLSYDGSMYLKILLPS 678
Query: 102 EQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLG--TGAATL 159
+ D+++ F + G+L+ + D + L L+ V T +LG TG T
Sbjct: 679 TLHTEAEDVSLRFMSQRAYGLLMATTSKESA--DTLRLELDGGRVKLTVNLGQMTGDHTR 736
Query: 160 RSSNPISLG 168
+ I G
Sbjct: 737 LEFHSIETG 745
Score = 89 (36.4 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 46/192 (23%), Positives = 80/192 (41%)
Query: 106 SLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGA-ATLRSSNP 164
S+ +L+ K ++LY G DF+ L ++ + F + ATL++
Sbjct: 42 SVGELSFSLKTNISKALVLYLDD--GGNCDFLELLISGGVLHLRFAIHCAEPATLQTETR 99
Query: 165 ISLGEWHKLRLTRTGRHAYLQVD-RFPSSQILSPGPFTQXXXXXXXXXGGVP-DYNI--- 219
+S WH + LTR R L VD ++++ S + GG+P D +
Sbjct: 100 VSDDRWHMVLLTRNYRQTLLMVDGEARAAEVRSKR--REMAVVSDLFVGGIPPDVRLSAL 157
Query: 220 VSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNCAHP--CITQ-PC-GSGSCVP 275
S VK + F+G LI+N +L + A+ + ++ C Q PC G C
Sbjct: 158 TSSTVKYEPPFLG-----LISNLKLGEIPPALINSHGIHSDLELLCSKQNPCLNGGVCSV 212
Query: 276 LYDGYKCVCTQS 287
+ +C C+ +
Sbjct: 213 QFGEVQCDCSHT 224
Score = 78 (32.5 bits), Expect = 9.4e-10, Sum P(2) = 9.4e-10
Identities = 17/66 (25%), Positives = 31/66 (46%)
Query: 344 RIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTK-INNGVWHR 402
+ KT+ S GL+L+ S DF+ + + G+ H ++ K +N+ WH
Sbjct: 827 QFKTTGSDGLMLFN-SGDGSDFIVVELVKGFVHYVFDLGNGPSLMKGNSEKPLNDNQWHN 885
Query: 403 LTVHRN 408
+ V R+
Sbjct: 886 VVVSRD 891
Score = 71 (30.1 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 23/86 (26%), Positives = 36/86 (41%)
Query: 341 IDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQT--KINNG 398
I + +T +GL+L TG +S D++ L + +G ++ K N+
Sbjct: 246 ITLSFRTLQRNGLMLHTG--KSADYVNLSLKSGAVWLVINLGSGAFEALVEPVNGKFNDN 303
Query: 399 VWHRLTVHRNFMVVMH-GSSHTRSNK 423
WH + V RN H G H NK
Sbjct: 304 AWHDVKVTRNLR--QHSGIGHAMVNK 327
Score = 67 (28.6 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 15/51 (29%), Positives = 27/51 (52%)
Query: 462 FEQLNTDSGLYVGGVEDIEELTRSKYHHSFKGWISNLILSNDYQVKLPLSR 512
+ L +D Y+GG + +L S ++F G + +++ N+ KL LSR
Sbjct: 350 YTMLGSDDFFYIGGSPNTADLPGSPVSNNFMGCLKDVVYKNN-DFKLELSR 399
Score = 59 (25.8 bits), Expect = 0.00051, Sum P(3) = 0.00051
Identities = 17/80 (21%), Positives = 36/80 (45%)
Query: 340 NIDMRIKTSSSSGLILWT-----GSSQSK-------DFLALGIHNGYAHVMYXXXXXXXX 387
+I +TS SGL+L++ GS +++ D+ A+ + +G+ +++
Sbjct: 448 SISFDFRTSEPSGLLLFSHGRPQGSKETRPGRETKSDYFAMELLDGFLYLLMDMGSGSIK 507
Query: 388 XXXXQTKINNGVWHRLTVHR 407
K+N+G W + R
Sbjct: 508 IKASNKKVNDGEWCHVDFQR 527
Score = 47 (21.6 bits), Expect = 0.00051, Sum P(3) = 0.00051
Identities = 12/43 (27%), Positives = 25/43 (58%)
Query: 439 RTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVEDIEE 481
R G++ I +++ S + G E L+ DS +Y+GG+ ++ +
Sbjct: 527 REGRRGSISVNSRSMPFSTNEGS-EILDLDSDMYLGGLPEMRQ 568
Score = 38 (18.4 bits), Expect = 0.00073, Sum P(3) = 0.00073
Identities = 7/15 (46%), Positives = 12/15 (80%)
Query: 226 IKSSFIGCIQKVLIN 240
+ S+FIG +Q +L+N
Sbjct: 756 VPSNFIGHLQGLLLN 770
>UNIPROTKB|Q9NYQ7 [details] [associations]
symbol:CELSR3 "Cadherin EGF LAG seven-pass G-type receptor
3" species:9606 "Homo sapiens" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0007156 "homophilic cell adhesion" evidence=IEA]
[GO:0007218 "neuropeptide signaling pathway" evidence=IEA]
[GO:0004930 "G-protein coupled receptor activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0001764
"neuron migration" evidence=IEA] [GO:0007413 "axonal fasciculation"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000203 InterPro:IPR000742 InterPro:IPR000832
InterPro:IPR001879 InterPro:IPR002126 InterPro:IPR015919
InterPro:IPR017981 InterPro:IPR017983 InterPro:IPR020894
Pfam:PF00002 Pfam:PF00008 Pfam:PF00028 Pfam:PF01825 Pfam:PF02793
PRINTS:PR00205 PRINTS:PR00249 PROSITE:PS00232 PROSITE:PS00649
PROSITE:PS00650 PROSITE:PS50026 PROSITE:PS50221 PROSITE:PS50227
PROSITE:PS50261 PROSITE:PS50268 SMART:SM00008 SMART:SM00112
SMART:SM00181 SMART:SM00303 GO:GO:0016021 GO:GO:0005886
GO:GO:0001764 GO:GO:0004930 GO:GO:0007218 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 eggNOG:NOG12793 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 SMART:SM00180 SMART:SM00282
PROSITE:PS00010 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
GO:GO:0007413 GO:GO:0007156 SUPFAM:SSF49313 InterPro:IPR022624
Pfam:PF12003 Gene3D:2.60.40.60 Pfam:PF02210 HOGENOM:HOG000231346
HOVERGEN:HBG050887 EMBL:AF231023 EMBL:AC121252 EMBL:AB011536
IPI:IPI00015345 IPI:IPI00798152 PIR:T00250 RefSeq:NP_001398.2
UniGene:Hs.631926 ProteinModelPortal:Q9NYQ7 SMR:Q9NYQ7
IntAct:Q9NYQ7 MINT:MINT-1381104 STRING:Q9NYQ7 PhosphoSite:Q9NYQ7
DMDM:229462826 PaxDb:Q9NYQ7 PRIDE:Q9NYQ7 Ensembl:ENST00000164024
Ensembl:ENST00000544264 GeneID:1951 KEGG:hsa:1951 UCSC:uc003cul.3
CTD:1951 GeneCards:GC03M048673 H-InvDB:HIX0200467 HGNC:HGNC:3230
MIM:604264 neXtProt:NX_Q9NYQ7 PharmGKB:PA26395 KO:K04602
OMA:DGRRVDM OrthoDB:EOG4C87RG PhylomeDB:Q9NYQ7 ChiTaRS:CELSR3
GenomeRNAi:1951 NextBio:7907 ArrayExpress:Q9NYQ7 Bgee:Q9NYQ7
CleanEx:HS_CELSR3 Genevestigator:Q9NYQ7 GermOnline:ENSG00000008300
Uniprot:Q9NYQ7
Length = 3312
Score = 161 (61.7 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 41/135 (30%), Positives = 67/135 (49%)
Query: 46 KCNKTPCEHGGKCITTPGSSY-CLCPLG--FTGDLCQTRLDLQVPQFNGSSYLRYQGLGE 102
+C C +GG C P + C CP G F G C+ + F SS++ ++GL +
Sbjct: 1478 RCVPGVCRNGGTCTDAPNGGFRCQCPAGGAFEGPRCE----VAARSFPPSSFVMFRGLRQ 1533
Query: 103 QYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSS 162
++ L L++ F ++ +G+L YNG R + DF+AL L V T+ G + +
Sbjct: 1534 RFH--LTLSLSFATVQQSGLLFYNG-RLNEKHDFLALELVAGQVRLTYSTGESNTVVSPT 1590
Query: 163 NP--ISLGEWHKLRL 175
P +S G+WH + L
Sbjct: 1591 VPGGLSDGQWHTVHL 1605
Score = 155 (59.6 bits), Expect = 5.8e-05, Sum P(3) = 5.8e-05
Identities = 66/257 (25%), Positives = 101/257 (39%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQ-FNGSSYLRYQGLGEQYL 105
C+ PC++ G C GS C CP+GF G CQ L + P F G+ L + + +
Sbjct: 1726 CDSGPCKNSGFCSERWGSFSCDCPVGFGGKDCQ--LTMAHPHHFRGNGTLSWNFGSDMAV 1783
Query: 106 SL-LDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAAT--LRSS 162
S+ L + F+ G+L+ +A G + L+ + T G+G A+ L
Sbjct: 1784 SVPWYLGLAFRTRATQGVLMQV--QA-GPHSTLLCQLDRGLLSVTVTRGSGRASHLLLDQ 1840
Query: 163 NPISLGEWHKLRLT-------RTGRHAYL-QVDRFPSSQILSPGPFTQXXXXXXXXXGGV 214
+S G WH LRL R G H + +D ++ G Q GG+
Sbjct: 1841 VTVSDGRWHDLRLELQEEPGGRRGHHVLMVSLDFSLFQDTMAVGSELQGLKVKQLHVGGL 1900
Query: 215 PDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNCAHPCI-TQPCGSGSC 273
P + +GCIQ V + + + + VN C+ T C SG C
Sbjct: 1901 PP----GSAEEAPQGLVGCIQGVWLGSTPSGSPA-LLPPSHRVNAEPGCVVTNACASGPC 1955
Query: 274 VP------LYDGYKCVC 284
P L+ + C C
Sbjct: 1956 PPHADCRDLWQTFSCTC 1972
Score = 75 (31.5 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 22/77 (28%), Positives = 34/77 (44%)
Query: 212 GGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNCA---HPCITQPC 268
GGVP+ P V K FIGC++ + I+ +++ + C H C + PC
Sbjct: 1674 GGVPNLPENFP-VSHKD-FIGCMRDLHIDGRRVDMAAFVANNGTMAGCQAKLHFCDSGPC 1731
Query: 269 -GSGSCVPLYDGYKCVC 284
SG C + + C C
Sbjct: 1732 KNSGFCSERWGSFSCDC 1748
Score = 42 (19.8 bits), Expect = 5.8e-05, Sum P(3) = 5.8e-05
Identities = 6/17 (35%), Positives = 12/17 (70%)
Query: 44 EDKCNKTPCEHGGKCIT 60
++ C + PCE+ KC++
Sbjct: 1376 DNVCLREPCENYMKCVS 1392
Score = 40 (19.1 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 266 QPCGSGSCVPLYDGYKCVCT-QSCKESHLTEVMC 298
+P GS SC+P D Y T +SC H + C
Sbjct: 2067 RPRGSDSCLPC-DCYPVGSTSRSCAP-HSGQCPC 2098
>UNIPROTKB|F1SER9 [details] [associations]
symbol:FAT1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0030175 "filopodium" evidence=IEA] [GO:0030027 "lamellipodium"
evidence=IEA] [GO:0007163 "establishment or maintenance of cell
polarity" evidence=IEA] [GO:0007015 "actin filament organization"
evidence=IEA] [GO:0005911 "cell-cell junction" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007156 "homophilic cell adhesion" evidence=IEA] [GO:0005509
"calcium ion binding" evidence=IEA] InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR002126 InterPro:IPR015919
InterPro:IPR018097 InterPro:IPR020894 Pfam:PF00008 Pfam:PF00028
Pfam:PF07645 PRINTS:PR00205 PROSITE:PS00232 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS50268 SMART:SM00112 SMART:SM00179
SMART:SM00181 InterPro:IPR000152 GO:GO:0016021 GO:GO:0005886
GO:GO:0005634 GO:GO:0048471 GO:GO:0007015 GO:GO:0007163
GO:GO:0005509 GO:GO:0005911 GO:GO:0030027 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030175 PROSITE:PS01186
InterPro:IPR001791 SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025
GO:GO:0007156 SUPFAM:SSF49313 Gene3D:2.60.40.60
GeneTree:ENSGT00700000104156 Pfam:PF02210 OMA:PYEAFIV EMBL:CU062594
EMBL:CU302402 Ensembl:ENSSSCT00000007666 Uniprot:F1SER9
Length = 4587
Score = 177 (67.4 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 62/259 (23%), Positives = 111/259 (42%)
Query: 47 CNKTPCEHGGKCITTP-GSSY-CLCPLGFTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQY 104
C +PC G +C++ P Y C+CP G G C + F G+S+++Y+ + +
Sbjct: 3793 CEDSPCPEGSECVSDPLEEKYTCVCPGGKFGQ-CPGSSSVT---FTGNSFVKYRLMENEN 3848
Query: 105 LSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLR-SSN 163
+ LT+ + + +++Y A G D+ L ++ + + FD G+G + S
Sbjct: 3849 KLEMKLTMRLRTYSSHAVVMY----ARGT-DYSILEIHSGRLQYKFDCGSGPGIVSVQSI 3903
Query: 164 PISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGG----VPDYNI 219
++ G WH + L G +A L +D+ ++ +PG GG +
Sbjct: 3904 QVNDGLWHAVSLEVNGNYARLVLDQVHTASGTAPGTLKTLNLDNHVFFGGHIRQQGSRHG 3963
Query: 220 VSPKVKIKSSFIGCIQKVLINNHELNI------LGEAIQGVNV-----VNCAHPCITQPC 268
SP+V + F GC+ + +N EL + + V+V + C + PC
Sbjct: 3964 RSPQVG--NGFRGCMDSIYLNGQELPLNNKPRSYAHIEESVDVSPGCLLTATEDCSSSPC 4021
Query: 269 GSGS-CVPL-YDGYKCVCT 285
+G C P GY C C+
Sbjct: 4022 QNGGVCNPSPTGGYYCKCS 4040
Score = 60 (26.2 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 11/35 (31%), Positives = 16/35 (45%)
Query: 263 CITQPCGSGS-CVPLYDGYKCVCTQSCKESHLTEV 296
C PC +G+ C Y Y C C+ + H +V
Sbjct: 4130 CAGNPCHNGALCENTYGSYHCNCSHEYRGRHCEDV 4164
Score = 49 (22.3 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 9/23 (39%), Positives = 11/23 (47%)
Query: 263 CITQPC-GSGSCVPLYDGYKCVC 284
C +PC G+C DG C C
Sbjct: 4092 CKDEPCKNGGTCFDSLDGAVCQC 4114
Score = 45 (20.9 bits), Expect = 4.7e-08, Sum P(2) = 4.7e-08
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 261 HPCITQPC-GSGSCVP-----------LYDGYKCVCTQSCKE 290
+PC + PC G+C+ LY G +C + CK+
Sbjct: 4053 NPCSSNPCLYGGTCIVDNGDFICQCRGLYTGQRCQLSPYCKD 4094
>UNIPROTKB|F1N6Y9 [details] [associations]
symbol:CELSR1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090251 "protein localization involved in establishment
of planar polarity" evidence=IEA] [GO:0090179 "planar cell polarity
pathway involved in neural tube closure" evidence=IEA] [GO:0060490
"lateral sprouting involved in lung morphogenesis" evidence=IEA]
[GO:0060489 "planar dichotomous subdivision of terminal units
involved in lung branching morphogenesis" evidence=IEA] [GO:0060488
"orthogonal dichotomous subdivision of terminal units involved in
lung branching morphogenesis" evidence=IEA] [GO:0048105
"establishment of body hair planar orientation" evidence=IEA]
[GO:0045176 "apical protein localization" evidence=IEA] [GO:0042472
"inner ear morphogenesis" evidence=IEA] [GO:0042249 "establishment
of planar polarity of embryonic epithelium" evidence=IEA]
[GO:0042060 "wound healing" evidence=IEA] [GO:0032956 "regulation
of actin cytoskeleton organization" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0007626 "locomotory behavior" evidence=IEA] [GO:0007266 "Rho
protein signal transduction" evidence=IEA] [GO:0001942 "hair
follicle development" evidence=IEA] [GO:0001843 "neural tube
closure" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0004930 "G-protein coupled
receptor activity" evidence=IEA] [GO:0007218 "neuropeptide
signaling pathway" evidence=IEA] [GO:0005509 "calcium ion binding"
evidence=IEA] InterPro:IPR000203 InterPro:IPR000742
InterPro:IPR000832 InterPro:IPR001879 InterPro:IPR001881
InterPro:IPR017981 InterPro:IPR017983 Pfam:PF00002 Pfam:PF00008
Pfam:PF01825 Pfam:PF02793 PRINTS:PR00249 PROSITE:PS00650
PROSITE:PS50026 PROSITE:PS50221 PROSITE:PS50227 PROSITE:PS50261
SMART:SM00008 SMART:SM00179 SMART:SM00181 SMART:SM00303
InterPro:IPR000152 GO:GO:0016021 GO:GO:0005886 GO:GO:0001764
GO:GO:0009952 GO:GO:0004930 GO:GO:0007218 GO:GO:0005509
GO:GO:0007626 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0042472 GO:GO:0001942 GO:GO:0007266
GO:GO:0001843 GO:GO:0042060 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 SMART:SM00180 SMART:SM00282 PROSITE:PS00010
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 GO:GO:0032956
InterPro:IPR022624 Pfam:PF12003 GeneTree:ENSGT00700000104170
GO:GO:0045176 Pfam:PF02210 GO:GO:0048105 GO:GO:0042249
GO:GO:0060490 GO:GO:0060488 GO:GO:0090179 GO:GO:0060489
GO:GO:0090251 EMBL:DAAA02014976 EMBL:DAAA02014977 EMBL:DAAA02014978
EMBL:DAAA02014979 IPI:IPI00694670 Ensembl:ENSBTAT00000010571
OMA:ALRSNLH Uniprot:F1N6Y9
Length = 1675
Score = 177 (67.4 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 74/300 (24%), Positives = 124/300 (41%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQ-FNGSSYLRYQGLGEQYL 105
C+ T C++GG C++ + C CPL F G C+ + PQ F+G S + + L + +
Sbjct: 301 CDGTWCQNGGTCVSGWNTYLCECPLRFGGKNCEQVMPH--PQRFSGESVVSWSDL-DIII 357
Query: 106 SL-LDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTG-AATLR-SS 162
S+ L ++F+ + +G+L+ GV + L + + +V F G +++ S
Sbjct: 358 SVPWYLGLMFRTRKEDGVLM---EATAGVSSRLHLQILNNHVQFEVSHGASDVVSMQLSR 414
Query: 163 NPISLGEWH----KLRLTRTGRHA-YLQV---DRFPSSQILSPGPFTQXXXXXXXXXGGV 214
+ ++ GEWH +L+ G+ YL + D + G GGV
Sbjct: 415 SRVTDGEWHHLLIELKSATEGKDIKYLAIMTLDYGMDQDTVQIGNQLPGLRMRSLIVGGV 474
Query: 215 PDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNCAHPC-ITQPCGSGSC 273
+ KV ++ F GC+Q V + NI + V C + PC SG C
Sbjct: 475 SE-----DKVSVRRGFQGCMQGVRMGETATNIATLNMNDALKVRVKDGCEVEDPCSSGPC 529
Query: 274 VP------LYDGYKCVCTQSCKESHLTEVMCAS-FDHGASFLHYLD-PE-IIHSSGLLHY 324
P + GY CVC + + + H A+ +H D P + G HY
Sbjct: 530 PPHSRCRNTWGGYACVCDRGYFGKRCVDACHMNPCRHAAACVHSPDSPRGYVCECGSSHY 589
Score = 164 (62.8 bits), Expect = 8.5e-08, Sum P(2) = 8.5e-08
Identities = 43/134 (32%), Positives = 66/134 (49%)
Query: 46 KCNKTPCEHGGKCITTP-GSSYCLCPLG-FTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQ 103
+C C++GG C+ G +C+CP G F C+ PQ S++ ++GL ++
Sbjct: 54 RCAHGVCKNGGTCVNLLIGGFHCVCPPGAFERPYCEVTTRSFPPQ----SFVTFRGLRQR 109
Query: 104 YLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSN 163
+ + + F E N +LLYNG R + DFIAL + D V TF G T+
Sbjct: 110 FH--FTVALAFATQERNALLLYNG-RFNEKHDFIALEIVDEQVQLTFSAGETTTTVAPQV 166
Query: 164 P--ISLGEWHKLRL 175
P +S G WH ++L
Sbjct: 167 PGGVSDGRWHAVQL 180
Score = 47 (21.6 bits), Expect = 8.5e-08, Sum P(2) = 8.5e-08
Identities = 39/198 (19%), Positives = 74/198 (37%)
Query: 212 GGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNCAHPCITQPCGSG 271
GGVP+ P V+ + F+GC++ + I+ +++ CA C
Sbjct: 249 GGVPNLPEDFP-VRNRQ-FVGCMRNLSIDGRHVDMASFIANNGTRAGCAAQ--RNFCDGT 304
Query: 272 SCVPLYDGYKCVCTQSCKESHLTEVMCASFDHGASFLHYLD-PEIIHSSGLLHYKFQLHV 330
C +G CV S ++L E C G + + P+ ++ + L +
Sbjct: 305 WC---QNGGTCV---SGWNTYLCE--CPLRFGGKNCEQVMPHPQRFSGESVVSWS-DLDI 355
Query: 331 DFRITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXX 390
+ Y + + +T G+++ + S L L I N HV +
Sbjct: 356 IISVPWY---LGLMFRTRKEDGVLMEATAGVSSR-LHLQILNN--HVQFEVSHGASDVVS 409
Query: 391 XQ---TKINNGVWHRLTV 405
Q +++ +G WH L +
Sbjct: 410 MQLSRSRVTDGEWHHLLI 427
Score = 37 (18.1 bits), Expect = 9.0e-07, Sum P(2) = 9.0e-07
Identities = 11/39 (28%), Positives = 20/39 (51%)
Query: 213 GVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAI 251
G PD+ +S + + SF G I V++ N + +L +
Sbjct: 1246 GNPDFCWLSLRDTLIWSFAGPIGTVIVVNTVIFVLSAKV 1284
Score = 37 (18.1 bits), Expect = 9.0e-07, Sum P(2) = 9.0e-07
Identities = 17/57 (29%), Positives = 25/57 (43%)
Query: 262 PCITQPCGSGSCVPLYDGYKCVCTQSCKESHLTEVMCASFDHGASFLHYLDPEIIHS 318
PC P GS S V D +C SCK + C D+ + + L E+I++
Sbjct: 650 PCDCFPHGSHSRVCDMDTGQC----SCKPGVIGR-QCNRCDNPFAEVTVLGCEVIYN 701
>ZFIN|ZDB-GENE-040724-213 [details] [associations]
symbol:lama4 "laminin, alpha 4" species:7955 "Danio
rerio" [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0005606 "laminin-1 complex" evidence=IEA]
[GO:0030155 "regulation of cell adhesion" evidence=IEA] [GO:0005102
"receptor binding" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0005604 "basement membrane" evidence=IEA]
[GO:0048514 "blood vessel morphogenesis" evidence=IGI] [GO:0030903
"notochord development" evidence=IGI] [GO:0016203 "muscle
attachment" evidence=IGI;IMP] InterPro:IPR009254 InterPro:IPR010307
Pfam:PF06008 Pfam:PF06009 ZFIN:ZDB-GENE-040724-213 GO:GO:0030155
GO:GO:0048514 GO:GO:0007155 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0016203
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 GO:GO:0030903 GO:GO:0005606 CTD:3910
HOVERGEN:HBG052299 KO:K06241 EMBL:AY862414 IPI:IPI00862172
RefSeq:NP_001034154.1 UniGene:Dr.87613 ProteinModelPortal:Q2TJF5
STRING:Q2TJF5 GeneID:566796 KEGG:dre:566796 NextBio:20888381
Uniprot:Q2TJF5
Length = 1871
Score = 142 (55.0 bits), Expect = 1.5e-09, Sum P(3) = 1.5e-09
Identities = 48/196 (24%), Positives = 77/196 (39%)
Query: 89 FNGSSYLR--YQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGD-FIALYLNDRY 145
+ GS++ R Y G+ ++ K G++ Y AD G+ +AL+L
Sbjct: 1520 YGGSAHSRHEYTGIASAIKHESHFSLSLKTRSAFGLIFY---LADASGENSMALFLTHAR 1576
Query: 146 VDFTFDLGTGAATLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXX 205
+ FTF G +RS + G+WH + R G + +D + +PG T
Sbjct: 1577 LVFTFSSGQSQVRIRSKEKYNDGQWHDIIFIRAGNMGRMLIDGLTVLEDRAPGRNTSLLV 1636
Query: 206 XXXXXXGGVPDYNIVSPKVKIK-SSFIGCIQKVLINNHELNILGEAIQGVNVVNCAHPCI 264
GGVP + + + SSF GC++ + +N L + GV PC
Sbjct: 1637 QDPLYVGGVPPHQAMKNIQRTSVSSFTGCVRSLQLNGRSLTSASHSF-GVT------PCY 1689
Query: 265 TQPCGSGSCVPLYDGY 280
P G+ GY
Sbjct: 1690 EGPSEPGTYFAEEGGY 1705
Score = 83 (34.3 bits), Expect = 0.00094, Sum P(4) = 0.00094
Identities = 41/158 (25%), Positives = 70/158 (44%)
Query: 123 LLYNGHRADGVGDFIALYL-NDRYVDFTFDLGTGAATLR-SSNPISLGE--WHKLRLTRT 178
LLY G + G D++ L + ND V + + LG + SS P+S ++ +++ R
Sbjct: 937 LLYLGDK-QGKRDYMGLAIKNDNLV-YVYKLGEEEVEIPLSSKPVSSWPPVFNFVKVERL 994
Query: 179 GRHA--YLQV---DRFPSSQILSPG-P------FTQXXXXXXXXXGGVPDYNIVSPKVKI 226
GRH +L V D + + G P F GGVP + P +
Sbjct: 995 GRHGKVFLTVPSQDTTAEQKFIQKGEPVGTDTLFDLDPKDMVFIVGGVPP-GVTVPPILS 1053
Query: 227 KSSFIGCIQKVLINNHELNILG-EAIQGVNVVNCAHPC 263
+ F+GCI+ +NN +++ + + ++V A PC
Sbjct: 1054 LAPFVGCIELETLNNDVISLYNFKQLHKMDVKASA-PC 1090
Score = 70 (29.7 bits), Expect = 1.5e-09, Sum P(3) = 1.5e-09
Identities = 20/78 (25%), Positives = 37/78 (47%)
Query: 336 GYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTK- 394
G F + M ++ +SG++L Q K++L + I+ V+ T+
Sbjct: 1715 GSSFKMAMEVRPRVASGVLLHVFMEQ-KEYLTVYIYQSQVVVVVNNGIAEFSTHVSPTQE 1773
Query: 395 INNGVWHRLTVHRNFMVV 412
I +G WH++TV R+ V+
Sbjct: 1774 ICDGNWHKITVIRDGSVL 1791
Score = 70 (29.7 bits), Expect = 0.00094, Sum P(4) = 0.00094
Identities = 22/98 (22%), Positives = 48/98 (48%)
Query: 336 GYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXX----XXXXX 391
G D+ ++T +++G IL+ +++ +F L + NG+ +MY
Sbjct: 1125 GVVTRFDIEVRTVANNG-ILFLMVNET-NFFVLELKNGFLRLMYDFGFANGPVIIETNLA 1182
Query: 392 QTKINNGVWHRLTV---HRNFMVVMHGSSHTRSNKSSK 426
+ +IN+ +H ++V H ++++ SH +S +S K
Sbjct: 1183 KLQINDARYHEVSVIYHHSKKIILLVDRSHVKSFESEK 1220
Score = 64 (27.6 bits), Expect = 1.5e-09, Sum P(3) = 1.5e-09
Identities = 16/40 (40%), Positives = 19/40 (47%)
Query: 39 SKECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLC 78
+K+C E +CNK C G S C C G TG LC
Sbjct: 203 AKDCQECQCNK--C---GTASCDDRSGVCHCKPGVTGQLC 237
Score = 46 (21.3 bits), Expect = 0.00094, Sum P(4) = 0.00094
Identities = 18/66 (27%), Positives = 31/66 (46%)
Query: 439 RTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGV---EDIEELTRSKYHHSFKGWI 495
R G + ID ++ + G+ L LYVGGV + ++ + R+ SF G +
Sbjct: 1608 RAGNMGRMLIDGLTVLEDRAPGRNTSLLVQDPLYVGGVPPHQAMKNIQRTSVS-SFTGCV 1666
Query: 496 SNLILS 501
+L L+
Sbjct: 1667 RSLQLN 1672
Score = 41 (19.5 bits), Expect = 3.1e-07, Sum P(3) = 3.1e-07
Identities = 13/39 (33%), Positives = 14/39 (35%)
Query: 38 RSKECLEDKCNKT--PCEHGGKCITTPGSSYC-LCPLGF 73
R EC T P H +C G YC C GF
Sbjct: 254 RRCECASAALRATCHPLTHSCQCRPGAGGRYCERCLPGF 292
Score = 38 (18.4 bits), Expect = 6.2e-07, Sum P(3) = 6.2e-07
Identities = 5/13 (38%), Positives = 8/13 (61%)
Query: 67 CLCPLGFTGDLCQ 79
C+C G+ G C+
Sbjct: 123 CVCQDGYAGHYCE 135
>UNIPROTKB|F1N8P9 [details] [associations]
symbol:LAMA1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005102 "receptor binding" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 GeneTree:ENSGT00700000104140
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606 EMBL:AADN02048198
EMBL:AADN02048199 EMBL:AADN02048200 EMBL:AADN02048201
EMBL:AADN02048202 EMBL:AADN02048203 EMBL:AADN02048204
EMBL:AADN02048205 EMBL:AADN02048206 EMBL:AADN02048207
EMBL:AADN02048208 EMBL:AADN02048209 EMBL:AADN02048210
EMBL:AADN02048211 EMBL:AADN02048212 EMBL:AADN02048213
EMBL:AADN02048214 EMBL:AADN02048215 IPI:IPI00823129
Ensembl:ENSGALT00000023564 ArrayExpress:F1N8P9 Uniprot:F1N8P9
Length = 3060
Score = 135 (52.6 bits), Expect = 4.5e-09, Sum P(4) = 4.5e-09
Identities = 55/208 (26%), Positives = 93/208 (44%)
Query: 87 PQFNGSSYLRYQGLG----EQYL--SLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALY 140
PQ +S+ + G G E+ L ++ + I F PNG+LLY ++G DF++L
Sbjct: 2284 PQDEDTSF-HFDGRGYSVVEKALRSTVTQIIIFFSTFSPNGLLLYLA--SNGTKDFLSLE 2340
Query: 141 LNDRYVDFTFDLGTGAATLRSSNPISLGEWHKLRLTRTGRHAYLQV-DRF-----PSSQI 194
L D V T DL +G L + N + G W+K+ +R + L V D + + Q
Sbjct: 2341 LVDGKVRLTVDLCSGPLALTTENRYNNGTWYKISFSRNKKQGMLAVMDAYNLNYKETKQG 2400
Query: 195 LSPGPFTQXXXXXXX--XXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQ 252
+PG + GG+P V + + ++GCI+ + I+ ++L +
Sbjct: 2401 EAPGVASDLNRSDKDPIFIGGLPKSRAVRKGLNSRM-YVGCIKNLEISRSTFDLLRNSY- 2458
Query: 253 GVNVVNCAHPCITQPCGSGSCVPLYDGY 280
GV C+ +P S + L +GY
Sbjct: 2459 GVR-----KGCVLEPIRSMNI--LTNGY 2479
Score = 131 (51.2 bits), Expect = 1.6e-09, Sum P(3) = 1.6e-09
Identities = 40/146 (27%), Positives = 68/146 (46%)
Query: 110 LTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSN-PISLG 168
LT+ K EP+ +L Y G ++G DF+A+ + V +DLG+G+ + + I
Sbjct: 2125 LTLNVKTTEPDNLLFYLG--SNGKTDFLAVEMRRGKVALLWDLGSGSTRVEYPDFQIDNN 2182
Query: 169 EWHKLRLTRTGRHAYLQVDRFPSSQILSP----GPFTQXXXXXXXXX----GGVPDYNIV 220
+WH++ TR G+ L ++ S+Q SP P T GG+
Sbjct: 2183 KWHRIHATRFGKTGTLTIEEMNSNQKSSPKSATSPGTASILDVNKSTLMFIGGLGGQIKK 2242
Query: 221 SPKVKIKSSFIGCIQKVLINNHELNI 246
SP VK+ + F GC+ + +N + +
Sbjct: 2243 SPAVKV-THFKGCMGEASLNGKSIGL 2267
Score = 125 (49.1 bits), Expect = 1.7e-05, Sum P(3) = 1.7e-05
Identities = 44/178 (24%), Positives = 76/178 (42%)
Query: 108 LDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSNPISL 167
L + + + +G++ Y H+ + + D+ AL L + F+FDLG G A ++
Sbjct: 2722 LSVQLNLRTFASSGLIYYMAHQ-NQI-DYAALQLLGGQLYFSFDLGKGRAVASHPAIVND 2779
Query: 168 GEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVP-DYNIVSPKVKI 226
G+WH +R R + VD + + G + GG+P DY + +
Sbjct: 2780 GKWHTIRTEYVKRKGIIIVDGQELVSVSALGDGSTLDVEGKLYVGGLPIDY-VAKNLGNV 2838
Query: 227 KSSFIGCIQKVLINNHELNILGEAIQGVNVVNCAHPCITQPC---GSGSCVPLYDGYK 281
S CI + IN+ +L+ E+ + VN + + GSG + DGYK
Sbjct: 2839 THSIPACIGSMTINSKQLD--KESPVSIFAVNKCYATVQDGTFFDGSGFAALVRDGYK 2894
Score = 96 (38.9 bits), Expect = 1.6e-09, Sum P(3) = 1.6e-09
Identities = 51/200 (25%), Positives = 94/200 (47%)
Query: 347 TSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGVWHRLTVH 406
T S +GL+L+ S+ +KDFL+L + +G + + + NNG W++++
Sbjct: 2318 TFSPNGLLLYLASNGTKDFLSLELVDGKVRLTVDLCSGPLALTT-ENRYNNGTWYKISFS 2376
Query: 407 RN----FMVVMHGSSHTRSNKSSKIEFKCLSIQR-LHRTGKQCLIRIDTDYSMQSISGGK 461
RN + VM ++ + K +K + + + L+R+ K + I +++ G
Sbjct: 2377 RNKKQGMLAVM--DAYNLNYKETK-QGEAPGVASDLNRSDKDPIF-IGGLPKSRAVRKG- 2431
Query: 462 FEQLNTDSGLYVGGVEDIEELTRSKY---HHSF---KGWI-----SNLILSNDYQVKLPL 510
LN S +YVG ++++E ++RS + +S+ KG + S IL+N Y P
Sbjct: 2432 ---LN--SRMYVGCIKNLE-ISRSTFDLLRNSYGVRKGCVLEPIRSMNILTNGYIELEPK 2485
Query: 511 SRSQGSSCQLTCETLNTGQV 530
S S S T T N+ +
Sbjct: 2486 SLSPESELMATFATKNSNGI 2505
Score = 70 (29.7 bits), Expect = 4.5e-09, Sum P(4) = 4.5e-09
Identities = 17/81 (20%), Positives = 36/81 (44%)
Query: 338 EFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINN 397
+ ++ + ++T +SSGLI + D+ AL + G + + +N+
Sbjct: 2721 KLSVQLNLRTFASSGLIYYMAHQNQIDYAALQLLGGQLYFSFDLGKGRAVASHPAI-VND 2779
Query: 398 GVWHRLT---VHRNFMVVMHG 415
G WH + V R ++++ G
Sbjct: 2780 GKWHTIRTEYVKRKGIIIVDG 2800
Score = 62 (26.9 bits), Expect = 4.5e-09, Sum P(4) = 4.5e-09
Identities = 24/67 (35%), Positives = 38/67 (56%)
Query: 445 LIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVE-DIEE--LTRSKYHHSFKGWISNLILS 501
L++ D Y +QS S +T++ +YVGG D+++ LT SK SF G + NL+L+
Sbjct: 2982 LVQTDNPY-IQSTSA------DTNNPIYVGGYPGDVKQNCLT-SK--SSFHGCLRNLVLT 3031
Query: 502 NDYQVKL 508
Q +L
Sbjct: 3032 RGQQAEL 3038
Score = 62 (26.9 bits), Expect = 1.6e-06, Sum P(3) = 1.6e-06
Identities = 20/67 (29%), Positives = 28/67 (41%)
Query: 458 SGGKFEQLNTDSGLYVGGVEDIEELTRSKYHHSFKGWISNLILSN---DYQVKLPLSRSQ 514
S + +N S Y GG+ E+ K SF G ISNLI + D+ +
Sbjct: 2593 SSAEMSPMNI-SNFYAGGIPAGEDFFGLKMTGSFYGCISNLIFNKELLDFTTSMKYEHVD 2651
Query: 515 GSSCQLT 521
SC L+
Sbjct: 2652 MDSCFLS 2658
Score = 56 (24.8 bits), Expect = 1.6e-09, Sum P(3) = 1.6e-09
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 39 SKECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLC 78
S C++D+ ++ +HG T PG C C G+TG+ C
Sbjct: 387 SSVCVKDE-RQSDSQHG----TWPGQ--CQCRDGYTGEKC 419
Score = 56 (24.8 bits), Expect = 4.5e-09, Sum P(4) = 4.5e-09
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 60 TTPGSSYCLCPLGFTGDLCQTRL 82
+ P +C CP G+TG C++ L
Sbjct: 683 SAPDVEFCECPQGYTGISCESCL 705
Score = 49 (22.3 bits), Expect = 2.2e-08, Sum P(4) = 2.2e-08
Identities = 12/34 (35%), Positives = 15/34 (44%)
Query: 46 KCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQ 79
+CN + H C G C C G TG LC+
Sbjct: 1491 QCNPSGSVHVN-CDRVTGK--CPCKQGVTGQLCE 1521
Score = 47 (21.6 bits), Expect = 1.3e-07, Sum P(4) = 1.3e-07
Identities = 20/82 (24%), Positives = 34/82 (41%)
Query: 445 LIRIDTDYSMQSISG-GKFEQLNTDSGLYVGGVE-DIEELTRSKYHHSFKGWISNLIL-S 501
+I +D + S+S G L+ + LYVGG+ D HS I ++ + S
Sbjct: 2795 IIIVDGQ-ELVSVSALGDGSTLDVEGKLYVGGLPIDYVAKNLGNVTHSIPACIGSMTINS 2853
Query: 502 NDYQVKLPLSRSQGSSCQLTCE 523
+ P+S + C T +
Sbjct: 2854 KQLDKESPVSIFAVNKCYATVQ 2875
Score = 46 (21.3 bits), Expect = 4.3e-08, Sum P(4) = 4.3e-08
Identities = 7/13 (53%), Positives = 8/13 (61%)
Query: 67 CLCPLGFTGDLCQ 79
C CP G+ G CQ
Sbjct: 1343 CRCPAGYAGFSCQ 1355
Score = 43 (20.2 bits), Expect = 8.5e-08, Sum P(4) = 8.5e-08
Identities = 12/37 (32%), Positives = 14/37 (37%)
Query: 47 CNKTPCEHG-GKCITTPGSSYCLCPLGFTG---DLCQ 79
C C H C G C+CP G DLC+
Sbjct: 976 CTPCDCAHTQNNCNADSGQ--CICPPHTRGPKCDLCE 1010
Score = 41 (19.5 bits), Expect = 1.3e-07, Sum P(4) = 1.3e-07
Identities = 10/25 (40%), Positives = 11/25 (44%)
Query: 52 CEHGGKCITTPG--SSYC-LCPLGF 73
C H G+C PG C C GF
Sbjct: 944 CNHQGQCHCLPGVAGEKCDRCAHGF 968
Score = 41 (19.5 bits), Expect = 1.3e-07, Sum P(4) = 1.3e-07
Identities = 16/48 (33%), Positives = 19/48 (39%)
Query: 42 CLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQF 89
CL +CN C G P + CLC G+ C DL P F
Sbjct: 432 CL--RCN---CSLIGSINEDPCAEPCLCKENVEGENC----DLCKPGF 470
>UNIPROTKB|F1NM47 [details] [associations]
symbol:LAMA1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005102 "receptor binding" evidence=IEA] [GO:0007155
"cell adhesion" evidence=IEA] [GO:0030155 "regulation of cell
adhesion" evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0002011 "morphogenesis of an epithelial sheet"
evidence=IEA] [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005606 "laminin-1 complex"
evidence=IEA] [GO:0005608 "laminin-3 complex" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IEA] [GO:0005911
"cell-cell junction" evidence=IEA] [GO:0007166 "cell surface
receptor signaling pathway" evidence=IEA] [GO:0031175 "neuron
projection development" evidence=IEA] [GO:0043208
"glycosphingolipid binding" evidence=IEA] [GO:0045198
"establishment of epithelial cell apical/basal polarity"
evidence=IEA] [GO:0060441 "epithelial tube branching involved in
lung morphogenesis" evidence=IEA] [GO:0060445 "branching involved
in salivary gland morphogenesis" evidence=IEA] [GO:0061304 "retinal
blood vessel morphogenesis" evidence=IEA] InterPro:IPR009254
InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009 GO:GO:0005615
GO:GO:0030155 GO:GO:0007155 GO:GO:0005911 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0007166
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 Pfam:PF02210 GO:GO:0045995 GO:GO:0005201
GO:GO:0043208 GeneTree:ENSGT00700000104140 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
OMA:EPFYWRL GO:GO:0005606 GO:GO:0005608 EMBL:AADN02048198
EMBL:AADN02048199 EMBL:AADN02048200 EMBL:AADN02048201
EMBL:AADN02048202 EMBL:AADN02048203 EMBL:AADN02048204
EMBL:AADN02048205 EMBL:AADN02048206 EMBL:AADN02048207
EMBL:AADN02048208 EMBL:AADN02048209 EMBL:AADN02048210
EMBL:AADN02048211 EMBL:AADN02048212 EMBL:AADN02048213
EMBL:AADN02048214 EMBL:AADN02048215 IPI:IPI00587004
Ensembl:ENSGALT00000036890 ArrayExpress:F1NM47 Uniprot:F1NM47
Length = 3061
Score = 135 (52.6 bits), Expect = 4.5e-09, Sum P(4) = 4.5e-09
Identities = 55/208 (26%), Positives = 93/208 (44%)
Query: 87 PQFNGSSYLRYQGLG----EQYL--SLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALY 140
PQ +S+ + G G E+ L ++ + I F PNG+LLY ++G DF++L
Sbjct: 2285 PQDEDTSF-HFDGRGYSVVEKALRSTVTQIIIFFSTFSPNGLLLYLA--SNGTKDFLSLE 2341
Query: 141 LNDRYVDFTFDLGTGAATLRSSNPISLGEWHKLRLTRTGRHAYLQV-DRF-----PSSQI 194
L D V T DL +G L + N + G W+K+ +R + L V D + + Q
Sbjct: 2342 LVDGKVRLTVDLCSGPLALTTENRYNNGTWYKISFSRNKKQGMLAVMDAYNLNYKETKQG 2401
Query: 195 LSPGPFTQXXXXXXX--XXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQ 252
+PG + GG+P V + + ++GCI+ + I+ ++L +
Sbjct: 2402 EAPGVASDLNRSDKDPIFIGGLPKSRAVRKGLNSRM-YVGCIKNLEISRSTFDLLRNSY- 2459
Query: 253 GVNVVNCAHPCITQPCGSGSCVPLYDGY 280
GV C+ +P S + L +GY
Sbjct: 2460 GVR-----KGCVLEPIRSMNI--LTNGY 2480
Score = 131 (51.2 bits), Expect = 1.6e-09, Sum P(3) = 1.6e-09
Identities = 40/146 (27%), Positives = 68/146 (46%)
Query: 110 LTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSN-PISLG 168
LT+ K EP+ +L Y G ++G DF+A+ + V +DLG+G+ + + I
Sbjct: 2126 LTLNVKTTEPDNLLFYLG--SNGKTDFLAVEMRRGKVALLWDLGSGSTRVEYPDFQIDNN 2183
Query: 169 EWHKLRLTRTGRHAYLQVDRFPSSQILSP----GPFTQXXXXXXXXX----GGVPDYNIV 220
+WH++ TR G+ L ++ S+Q SP P T GG+
Sbjct: 2184 KWHRIHATRFGKTGTLTIEEMNSNQKSSPKSATSPGTASILDVNKSTLMFIGGLGGQIKK 2243
Query: 221 SPKVKIKSSFIGCIQKVLINNHELNI 246
SP VK+ + F GC+ + +N + +
Sbjct: 2244 SPAVKV-THFKGCMGEASLNGKSIGL 2268
Score = 125 (49.1 bits), Expect = 1.7e-05, Sum P(3) = 1.7e-05
Identities = 44/178 (24%), Positives = 76/178 (42%)
Query: 108 LDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSNPISL 167
L + + + +G++ Y H+ + + D+ AL L + F+FDLG G A ++
Sbjct: 2723 LSVQLNLRTFASSGLIYYMAHQ-NQI-DYAALQLLGGQLYFSFDLGKGRAVASHPAIVND 2780
Query: 168 GEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVP-DYNIVSPKVKI 226
G+WH +R R + VD + + G + GG+P DY + +
Sbjct: 2781 GKWHTIRTEYVKRKGIIIVDGQELVSVSALGDGSTLDVEGKLYVGGLPIDY-VAKNLGNV 2839
Query: 227 KSSFIGCIQKVLINNHELNILGEAIQGVNVVNCAHPCITQPC---GSGSCVPLYDGYK 281
S CI + IN+ +L+ E+ + VN + + GSG + DGYK
Sbjct: 2840 THSIPACIGSMTINSKQLD--KESPVSIFAVNKCYATVQDGTFFDGSGFAALVRDGYK 2895
Score = 96 (38.9 bits), Expect = 1.6e-09, Sum P(3) = 1.6e-09
Identities = 51/200 (25%), Positives = 94/200 (47%)
Query: 347 TSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGVWHRLTVH 406
T S +GL+L+ S+ +KDFL+L + +G + + + NNG W++++
Sbjct: 2319 TFSPNGLLLYLASNGTKDFLSLELVDGKVRLTVDLCSGPLALTT-ENRYNNGTWYKISFS 2377
Query: 407 RN----FMVVMHGSSHTRSNKSSKIEFKCLSIQR-LHRTGKQCLIRIDTDYSMQSISGGK 461
RN + VM ++ + K +K + + + L+R+ K + I +++ G
Sbjct: 2378 RNKKQGMLAVM--DAYNLNYKETK-QGEAPGVASDLNRSDKDPIF-IGGLPKSRAVRKG- 2432
Query: 462 FEQLNTDSGLYVGGVEDIEELTRSKY---HHSF---KGWI-----SNLILSNDYQVKLPL 510
LN S +YVG ++++E ++RS + +S+ KG + S IL+N Y P
Sbjct: 2433 ---LN--SRMYVGCIKNLE-ISRSTFDLLRNSYGVRKGCVLEPIRSMNILTNGYIELEPK 2486
Query: 511 SRSQGSSCQLTCETLNTGQV 530
S S S T T N+ +
Sbjct: 2487 SLSPESELMATFATKNSNGI 2506
Score = 70 (29.7 bits), Expect = 4.5e-09, Sum P(4) = 4.5e-09
Identities = 17/81 (20%), Positives = 36/81 (44%)
Query: 338 EFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINN 397
+ ++ + ++T +SSGLI + D+ AL + G + + +N+
Sbjct: 2722 KLSVQLNLRTFASSGLIYYMAHQNQIDYAALQLLGGQLYFSFDLGKGRAVASHPAI-VND 2780
Query: 398 GVWHRLT---VHRNFMVVMHG 415
G WH + V R ++++ G
Sbjct: 2781 GKWHTIRTEYVKRKGIIIVDG 2801
Score = 62 (26.9 bits), Expect = 4.5e-09, Sum P(4) = 4.5e-09
Identities = 24/67 (35%), Positives = 38/67 (56%)
Query: 445 LIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVE-DIEE--LTRSKYHHSFKGWISNLILS 501
L++ D Y +QS S +T++ +YVGG D+++ LT SK SF G + NL+L+
Sbjct: 2983 LVQTDNPY-IQSTSA------DTNNPIYVGGYPGDVKQNCLT-SK--SSFHGCLRNLVLT 3032
Query: 502 NDYQVKL 508
Q +L
Sbjct: 3033 RGQQAEL 3039
Score = 62 (26.9 bits), Expect = 1.6e-06, Sum P(3) = 1.6e-06
Identities = 20/67 (29%), Positives = 28/67 (41%)
Query: 458 SGGKFEQLNTDSGLYVGGVEDIEELTRSKYHHSFKGWISNLILSN---DYQVKLPLSRSQ 514
S + +N S Y GG+ E+ K SF G ISNLI + D+ +
Sbjct: 2594 SSAEMSPMNI-SNFYAGGIPAGEDFFGLKMTGSFYGCISNLIFNKELLDFTTSMKYEHVD 2652
Query: 515 GSSCQLT 521
SC L+
Sbjct: 2653 MDSCFLS 2659
Score = 56 (24.8 bits), Expect = 1.6e-09, Sum P(3) = 1.6e-09
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 60 TTPGSSYCLCPLGFTGDLCQTRL 82
+ P +C CP G+TG C++ L
Sbjct: 683 SAPDVEFCECPQGYTGISCESCL 705
Score = 56 (24.8 bits), Expect = 4.5e-09, Sum P(4) = 4.5e-09
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 39 SKECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLC 78
S C++D+ ++ +HG T PG C C G+TG+ C
Sbjct: 387 SSVCVKDE-RQSDSQHG----TWPGQ--CQCRDGYTGEKC 419
Score = 49 (22.3 bits), Expect = 2.2e-08, Sum P(4) = 2.2e-08
Identities = 12/34 (35%), Positives = 15/34 (44%)
Query: 46 KCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQ 79
+CN + H C G C C G TG LC+
Sbjct: 1491 QCNPSGSVHVN-CDRVTGK--CPCKQGVTGQLCE 1521
Score = 47 (21.6 bits), Expect = 1.3e-07, Sum P(4) = 1.3e-07
Identities = 20/82 (24%), Positives = 34/82 (41%)
Query: 445 LIRIDTDYSMQSISG-GKFEQLNTDSGLYVGGVE-DIEELTRSKYHHSFKGWISNLIL-S 501
+I +D + S+S G L+ + LYVGG+ D HS I ++ + S
Sbjct: 2796 IIIVDGQ-ELVSVSALGDGSTLDVEGKLYVGGLPIDYVAKNLGNVTHSIPACIGSMTINS 2854
Query: 502 NDYQVKLPLSRSQGSSCQLTCE 523
+ P+S + C T +
Sbjct: 2855 KQLDKESPVSIFAVNKCYATVQ 2876
Score = 46 (21.3 bits), Expect = 4.3e-08, Sum P(4) = 4.3e-08
Identities = 7/13 (53%), Positives = 8/13 (61%)
Query: 67 CLCPLGFTGDLCQ 79
C CP G+ G CQ
Sbjct: 1343 CRCPAGYAGFSCQ 1355
Score = 43 (20.2 bits), Expect = 8.5e-08, Sum P(4) = 8.5e-08
Identities = 12/37 (32%), Positives = 14/37 (37%)
Query: 47 CNKTPCEHG-GKCITTPGSSYCLCPLGFTG---DLCQ 79
C C H C G C+CP G DLC+
Sbjct: 976 CTPCDCAHTQNNCNADSGQ--CICPPHTRGPKCDLCE 1010
Score = 41 (19.5 bits), Expect = 1.3e-07, Sum P(4) = 1.3e-07
Identities = 10/25 (40%), Positives = 11/25 (44%)
Query: 52 CEHGGKCITTPG--SSYC-LCPLGF 73
C H G+C PG C C GF
Sbjct: 944 CNHQGQCHCLPGVAGEKCDRCAHGF 968
Score = 41 (19.5 bits), Expect = 1.3e-07, Sum P(4) = 1.3e-07
Identities = 16/48 (33%), Positives = 19/48 (39%)
Query: 42 CLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQF 89
CL +CN C G P + CLC G+ C DL P F
Sbjct: 432 CL--RCN---CSLIGSINEDPCAEPCLCKENVEGENC----DLCKPGF 470
>UNIPROTKB|F1NR94 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0001656
"metanephros development" evidence=IEA] [GO:0001657 "ureteric bud
development" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001933 "negative regulation of
protein phosphorylation" evidence=IEA] [GO:0002042 "cell migration
involved in sprouting angiogenesis" evidence=IEA] [GO:0005095
"GTPase inhibitor activity" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0008201 "heparin binding" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0010593
"negative regulation of lamellipodium assembly" evidence=IEA]
[GO:0010596 "negative regulation of endothelial cell migration"
evidence=IEA] [GO:0010629 "negative regulation of gene expression"
evidence=IEA] [GO:0016337 "cell-cell adhesion" evidence=IEA]
[GO:0021836 "chemorepulsion involved in postnatal olfactory bulb
interneuron migration" evidence=IEA] [GO:0021972 "corticospinal
neuron axon guidance through spinal cord" evidence=IEA] [GO:0030308
"negative regulation of cell growth" evidence=IEA] [GO:0030837
"negative regulation of actin filament polymerization"
evidence=IEA] [GO:0031290 "retinal ganglion cell axon guidance"
evidence=IEA] [GO:0032870 "cellular response to hormone stimulus"
evidence=IEA] [GO:0033563 "dorsal/ventral axon guidance"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043116 "negative regulation of vascular
permeability" evidence=IEA] [GO:0043237 "laminin-1 binding"
evidence=IEA] [GO:0043394 "proteoglycan binding" evidence=IEA]
[GO:0045499 "chemorepellent activity" evidence=IEA] [GO:0048495
"Roundabout binding" evidence=IEA] [GO:0048754 "branching
morphogenesis of an epithelial tube" evidence=IEA] [GO:0048846
"axon extension involved in axon guidance" evidence=IEA]
[GO:0050929 "induction of negative chemotaxis" evidence=IEA]
[GO:0051058 "negative regulation of small GTPase mediated signal
transduction" evidence=IEA] [GO:0051414 "response to cortisol
stimulus" evidence=IEA] [GO:0060763 "mammary duct terminal end bud
growth" evidence=IEA] [GO:0061364 "apoptotic process involved in
luteolysis" evidence=IEA] [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IEA] [GO:0071504
"cellular response to heparin" evidence=IEA] [GO:0071672 "negative
regulation of smooth muscle cell chemotaxis" evidence=IEA]
[GO:0071676 "negative regulation of mononuclear cell migration"
evidence=IEA] [GO:0090024 "negative regulation of neutrophil
chemotaxis" evidence=IEA] [GO:0090260 "negative regulation of
retinal ganglion cell axon guidance" evidence=IEA] [GO:0090288
"negative regulation of cellular response to growth factor
stimulus" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005737
GO:GO:0008285 GO:GO:0005615 GO:GO:0009986 GO:GO:0030308
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0008201 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0043065 GO:GO:0071504 GO:GO:0005095
GO:GO:0016337 PROSITE:PS01186 GO:GO:0032870 GO:GO:0030837
GO:GO:0010629 InterPro:IPR001791 Pfam:PF00054 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 GO:GO:0071672 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0010596 GO:GO:0001933
GO:GO:0071676 GO:GO:0070100 GO:GO:0090288 GO:GO:0045499
Pfam:PF01463 GO:GO:0010593 GO:GO:0051414
GeneTree:ENSGT00700000104083 GO:GO:0050929 GO:GO:0090024
GO:GO:0051058 EMBL:AADN02015249 EMBL:AADN02015250 EMBL:AADN02015251
EMBL:AADN02015252 EMBL:AADN02015253 EMBL:AADN02015254
EMBL:AADN02015255 EMBL:AADN02015256 EMBL:AADN02015257
EMBL:AADN02015258 EMBL:AADN02015259 EMBL:AADN02015260
EMBL:AADN02015261 EMBL:AADN02015262 EMBL:AADN02015263
EMBL:AADN02015264 EMBL:AADN02015265 EMBL:AADN02015266
EMBL:AADN02015267 EMBL:AADN02015268 EMBL:AADN02015269
EMBL:AADN02015270 EMBL:AADN02015271 IPI:IPI00594561
Ensembl:ENSGALT00000037314 ArrayExpress:F1NR94 Uniprot:F1NR94
Length = 666
Score = 146 (56.5 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 52/201 (25%), Positives = 87/201 (43%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQYLS 106
C+ C++G +CI C C G+ G+ C+ + + N SYL+ + S
Sbjct: 466 CDNYECQNGAQCIVKESEPICQCLSGYQGEKCEKLISINF--VNKESYLQIPSA--KIHS 521
Query: 107 LLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGT-GAATLRSSNPI 165
++T+ E +GILLY G + D IA+ L V ++D G+ A+ + S I
Sbjct: 522 QTNITLQIATDEDSGILLYKGDK-----DHIAVELYRGRVRVSYDTGSYPASAIYSVETI 576
Query: 166 SLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIV----- 220
+ G +H + L + L +D I + + GG+P N +
Sbjct: 577 NDGNFHIVELLAMDQILSLSIDGGSPKIITNLSKQSTLNFDSPLYVGGMPVKNNIAALRQ 636
Query: 221 SPKVKIKSSFIGCIQKVLINN 241
SP +SF GCI+ + IN+
Sbjct: 637 SPGQN-GTSFHGCIRNLYINS 656
Score = 108 (43.1 bits), Expect = 2.1e-09, Sum P(4) = 2.1e-09
Identities = 21/65 (32%), Positives = 30/65 (46%)
Query: 26 WIQLNDGNKIKGRSKECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQ 85
W DG +G + E D C CE+ C+ + CLCP +TG+LC+ +LD
Sbjct: 324 WCTCADG--FEGENCEINVDDCEDNDCENNSTCVDGINNYTCLCPPEYTGELCEEKLDFC 381
Query: 86 VPQFN 90
N
Sbjct: 382 AQNLN 386
Score = 89 (36.4 bits), Expect = 2.4e-07, Sum P(4) = 2.4e-07
Identities = 17/41 (41%), Positives = 20/41 (48%)
Query: 45 DKC--NKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLD 83
D C N PC+H KCI TP C C G+ G+ C D
Sbjct: 379 DFCAQNLNPCQHDSKCILTPKGYKCDCTPGYVGEHCDIDFD 419
Score = 86 (35.3 bits), Expect = 4.9e-07, Sum P(4) = 4.9e-07
Identities = 17/51 (33%), Positives = 23/51 (45%)
Query: 36 KGRSKECLEDKCNKTPCEHGGKCITTPGSS---YCLCPLGFTGDLCQTRLD 83
KG+ + C PC HGG C G +C C GF G+ C+ +D
Sbjct: 291 KGQDCDIPIHACISNPCNHGGTCHLKEGEKDGFWCTCADGFEGENCEINVD 341
Score = 80 (33.2 bits), Expect = 4.1e-05, Sum P(3) = 4.1e-05
Identities = 12/44 (27%), Positives = 22/44 (50%)
Query: 45 DKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQ 88
D C C++G +C C+CP G++G C+ + +P+
Sbjct: 419 DDCQDNKCKNGAQCTDAVNGYTCICPEGYSGLFCEFSPPMVLPR 462
Score = 79 (32.9 bits), Expect = 1.1e-06, Sum P(4) = 1.1e-06
Identities = 16/37 (43%), Positives = 18/37 (48%)
Query: 46 KCN---KTPCEHGGKCITTPGSSY-CLCPLGFTGDLC 78
KCN PC++ G C P Y C CP GF G C
Sbjct: 259 KCNPCLSNPCKNDGTCNNDPVDFYRCTCPYGFKGQDC 295
Score = 77 (32.2 bits), Expect = 2.1e-09, Sum P(4) = 2.1e-09
Identities = 18/62 (29%), Positives = 29/62 (46%)
Query: 340 NIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGV 399
NI ++I T SG++L+ G KD +A+ ++ G V Y IN+G
Sbjct: 524 NITLQIATDEDSGILLYKGD---KDHIAVELYRGRVRVSYDTGSYPASAIYSVETINDGN 580
Query: 400 WH 401
+H
Sbjct: 581 FH 582
Score = 68 (29.0 bits), Expect = 0.00065, Sum P(3) = 0.00065
Identities = 14/39 (35%), Positives = 22/39 (56%)
Query: 254 VNVVNCAHPCITQPC-GSGSCV--PLYDGYKCVCTQSCK 289
VN++ +PC++ PC G+C P+ D Y+C C K
Sbjct: 254 VNILAKCNPCLSNPCKNDGTCNNDPV-DFYRCTCPYGFK 291
Score = 64 (27.6 bits), Expect = 2.1e-09, Sum P(4) = 2.1e-09
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 461 KFEQLNTDSGLYVGGV---EDIEELTRSKYHH--SFKGWISNLILSNDYQ 505
K LN DS LYVGG+ +I L +S + SF G I NL ++++ Q
Sbjct: 610 KQSTLNFDSPLYVGGMPVKNNIAALRQSPGQNGTSFHGCIRNLYINSELQ 659
Score = 55 (24.4 bits), Expect = 1.1e-06, Sum P(4) = 1.1e-06
Identities = 11/28 (39%), Positives = 13/28 (46%)
Query: 261 HPCITQPCGSGSCVPLY----DGYKCVC 284
H CI+ PC G L DG+ C C
Sbjct: 300 HACISNPCNHGGTCHLKEGEKDGFWCTC 327
Score = 51 (23.0 bits), Expect = 2.1e-09, Sum P(4) = 2.1e-09
Identities = 8/25 (32%), Positives = 13/25 (52%)
Query: 263 CITQPCGSGS-CVPLYDGYKCVCTQ 286
C C +G+ C +GY C+C +
Sbjct: 421 CQDNKCKNGAQCTDAVNGYTCICPE 445
Score = 50 (22.7 bits), Expect = 2.6e-09, Sum P(4) = 2.6e-09
Identities = 11/27 (40%), Positives = 12/27 (44%)
Query: 267 PCGSGS-CVPLYDGYKCVCTQSCKESH 292
PC S C+ GYKC CT H
Sbjct: 387 PCQHDSKCILTPKGYKCDCTPGYVGEH 413
Score = 43 (20.2 bits), Expect = 1.6e-05, Sum P(4) = 1.6e-05
Identities = 10/37 (27%), Positives = 15/37 (40%)
Query: 249 EAIQGVNVVNCAHPCITQPCGSGS-CVPLYDGYKCVC 284
+ +G N C C + S CV + Y C+C
Sbjct: 329 DGFEGENCEINVDDCEDNDCENNSTCVDGINNYTCLC 365
>WB|WBGene00018304 [details] [associations]
symbol:agr-1 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0005605 "basal lamina" evidence=IDA] InterPro:IPR000742
InterPro:IPR002350 Pfam:PF00050 Pfam:PF07648 SMART:SM00181
SMART:SM00280 GO:GO:0009792 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005605 KO:K06254
InterPro:IPR002049 InterPro:IPR003645 InterPro:IPR001791
Pfam:PF00053 SMART:SM00180 SMART:SM00274 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 InterPro:IPR011497
GeneTree:ENSGT00530000063501 Pfam:PF02210 EMBL:AM773423
EMBL:FO081361 RefSeq:NP_001022152.3 UniGene:Cel.24197
ProteinModelPortal:G5EG68 SMR:G5EG68 EnsemblMetazoa:F41G3.12
GeneID:3565243 KEGG:cel:CELE_F41G3.12 CTD:3565243 WormBase:F41G3.12
OMA:SARICGE NextBio:955733 Uniprot:G5EG68
Length = 1473
Score = 158 (60.7 bits), Expect = 2.2e-09, Sum P(3) = 2.2e-09
Identities = 78/332 (23%), Positives = 134/332 (40%)
Query: 88 QFNGSSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVD 147
+F + +++++ L + IVFK NGIL Y +D DFIA + D
Sbjct: 1083 KFKENGFVQFENLQIDVRERTRVEIVFKPYRTNGILFYWSVPSDPHTDFIAFAMIDAKPH 1142
Query: 148 FTFDLGTGAATLRSSNPISLGEWHKLRLTRTGRHAYLQVDR--FPSSQILSPGPFTQXXX 205
F ++LG+G + +R PI L WH +R+ R + + V+ S
Sbjct: 1143 FVYELGSGLSYIRGE-PIPLNSWHTVRIERLAKDVSMFVNETLVKKHTSQSKNAHLDISK 1201
Query: 206 XXXXXXGGVPDYNIVSPKV-KIKSSFIGCIQKVLINNHELNILG----EAIQGVNVVNCA 260
G VP+ I+S KV K+ F G +Q++ IN +N++ E + V+V+
Sbjct: 1202 KDALYVGFVPE-GIISHKVRKLNVPFEGELQELRINELPINLISGVSKEVMDKVDVMEIN 1260
Query: 261 HPCITQPCGSGSCVPLYDGY-KCVCTQSCKES---HLTEVMCASFDHGASFLHYLDPEII 316
I++ C S +D VC Q ++ H+ E F + +F +
Sbjct: 1261 EKEISK-CDGAS----FDRKGSVVCRQHENDARGIHINEQDALVFPNNVTFS-------V 1308
Query: 317 HSSGLLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAH 376
SS ++ F DFR T +F + + G W+ + + DFL + I G +
Sbjct: 1309 GSSKSSNFSF----DFR-TLKQFGVIWQ------EGA--WSQADEGGDFLLVFIEEGKLY 1355
Query: 377 V-MYXXXXXXXXXXXXQTKINNGVWHRLTVHR 407
V + + + WH ++ R
Sbjct: 1356 VGVNLGADVHLKPISTNVTVADNHWHSVSFRR 1387
Score = 113 (44.8 bits), Expect = 9.9e-05, Sum P(2) = 9.9e-05
Identities = 30/146 (20%), Positives = 66/146 (45%)
Query: 114 FKAIEPNGILLYNG--HRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSNPISLGE-- 169
F+ ++ G++ G +AD GDF+ +++ + + +LG S +++ +
Sbjct: 1320 FRTLKQFGVIWQEGAWSQADEGGDFLLVFIEEGKLYVGVNLGADVHLKPISTNVTVADNH 1379
Query: 170 WHKLRLTRTGRHAYLQVDRFPSSQIL-SPGPFTQXXXXXXXXXGGVPDYNIVSPKVKIKS 228
WH + R R L VD ++ SPG G P + + + + +
Sbjct: 1380 WHSVSFRRKERKCELWVDSKKILHVVASPGDVNLDSNGLVYLGGANPKKHKLLKSLNLSN 1439
Query: 229 SFIGCIQKVLINNHELNILGEAIQGV 254
F+GC++ + I E+N+L ++++ +
Sbjct: 1440 KFVGCVKNLKIFGAEVNLLVDSLKSI 1465
Score = 69 (29.3 bits), Expect = 2.2e-09, Sum P(3) = 2.2e-09
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 47 CNKTPCEHGGKCITTPGS-SYCLCP 70
C+ C HG KC+ +P S C+CP
Sbjct: 779 CHSLRCFHGAKCVPSPSSFPDCICP 803
Score = 52 (23.4 bits), Expect = 1.1e-07, Sum P(3) = 1.1e-07
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 47 CNKTPCEHGGKCITTPG-SSYCLCP 70
C K C G C+ P ++ C CP
Sbjct: 378 CEKMECGFWGSCVVKPDRTAECECP 402
Score = 48 (22.0 bits), Expect = 2.8e-07, Sum P(3) = 2.8e-07
Identities = 16/62 (25%), Positives = 29/62 (46%)
Query: 8 VILDDWNTVRVFRHRWDAWIQLND--GNKIKGRSKECLEDKCNKTPCEHGGKCITTPGSS 65
V L D +RV +DA +++ ++ + R+K+ + C ++ C G KC G
Sbjct: 115 VFLLDAPMIRVSLPIFDALFTISNKQAHRKRRRTKQAI---CEQSLCPFGSKCGLKTGVC 171
Query: 66 YC 67
C
Sbjct: 172 EC 173
Score = 43 (20.2 bits), Expect = 2.2e-09, Sum P(3) = 2.2e-09
Identities = 13/62 (20%), Positives = 31/62 (50%)
Query: 439 RTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVEDIE-ELTRS-KYHHSFKGWIS 496
R ++C + +D+ + ++ L+++ +Y+GG + +L +S + F G +
Sbjct: 1387 RKERKCELWVDSKKILHVVASPGDVNLDSNGLVYLGGANPKKHKLLKSLNLSNKFVGCVK 1446
Query: 497 NL 498
NL
Sbjct: 1447 NL 1448
Score = 43 (20.2 bits), Expect = 8.9e-07, Sum P(3) = 8.9e-07
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 52 CEHGGKCITTPGSSYCLCP 70
C+ C+ G C+CP
Sbjct: 456 CKKPQVCVVVDGKPKCVCP 474
Score = 41 (19.5 bits), Expect = 1.4e-06, Sum P(3) = 1.4e-06
Identities = 8/25 (32%), Positives = 12/25 (48%)
Query: 45 DKCNKTPCEHGGKCITTPGSSYCLC 69
D+C C +G +C S C+C
Sbjct: 593 DECLHVQCRYGEEC----RSGVCVC 613
>UNIPROTKB|F1MES2 [details] [associations]
symbol:Bt.86327 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007155 "cell adhesion" evidence=IEA]
InterPro:IPR000421 InterPro:IPR000742 Pfam:PF00754 PROSITE:PS01285
PROSITE:PS01286 PROSITE:PS50022 PROSITE:PS50026 SMART:SM00181
SMART:SM00231 GO:GO:0007155 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 InterPro:IPR008979
SUPFAM:SSF49785 InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025
Pfam:PF02210 GeneTree:ENSGT00560000076804 OMA:FHCKKSR
EMBL:DAAA02023308 EMBL:DAAA02023309 EMBL:DAAA02023310
EMBL:DAAA02023311 EMBL:DAAA02023312 EMBL:DAAA02023313
EMBL:DAAA02023314 IPI:IPI00826166 Ensembl:ENSBTAT00000008454
Uniprot:F1MES2
Length = 1280
Score = 174 (66.3 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 89/333 (26%), Positives = 139/333 (41%)
Query: 64 SSYCLCPLGFTGDLCQTRLDLQVPQFNG-SSYLRYQGL-GEQYLSLLDLTIVFKAIEPNG 121
++Y L PL +GD FN +SYL + GE LS D++ FK +G
Sbjct: 766 AAYSLGPLLCSGD----NSFWNSASFNTETSYLHFPTFRGE--LSA-DVSFFFKTTASSG 818
Query: 122 ILLYNGHRADGVGDFIALYLN-DRYVDFTFDLGTGAATLRSSNPISLGE--WHKLRLTRT 178
+ L N G+ DFI L L V F+FD+G G + +P + + WH ++ R
Sbjct: 819 VFLENL----GITDFIRLELRAPTEVTFSFDVGNGPCEVTVQSPTAFNDNRWHHVKADRN 874
Query: 179 GRHAYLQVDRFP-SSQILSPGPFTQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKV 237
+ A LQV + P +Q S + GG + F+GCI+ +
Sbjct: 875 IKEASLQVGQHPRKTQPASADGHARLQLNSQLFVGGTASR---------QRGFLGCIRSL 925
Query: 238 LINNHELNILGEAIQGVNVV-NCAHPCITQP--CGSGS-CVPLYDGYKCVCTQSCKESHL 293
+N L++ A+ V C C T C +G C G C CT S +
Sbjct: 926 RLNGLALDLEERAMMTPGVEPGCPGHCSTYGHLCHNGGRCREKRRGITCDCTVSAYDGPF 985
Query: 294 TEV-MCASFDHGASFL-----HYLDPEIIHSSGLLHYKFQLHVDFRITGYEFNIDMRIKT 347
E + A F G+S + HY D +SS + H D +TG + R T
Sbjct: 986 CENDISAYFGAGSSVIYNFQDHYNDTFSKNSSS---FAALFHEDLTLTGEMATLSFR--T 1040
Query: 348 SSSSGLILWTGSSQSKDFLALGIH-NGYAHVMY 379
+ + L+L+ SS +++L++ + NG + Y
Sbjct: 1041 TGTPSLLLYV-SSFYEEYLSVILAPNGSLQIRY 1072
>UNIPROTKB|F1PCK3 [details] [associations]
symbol:CNTNAP2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0007155 "cell adhesion" evidence=IEA]
InterPro:IPR000421 InterPro:IPR000742 Pfam:PF00008 Pfam:PF00754
PROSITE:PS01285 PROSITE:PS01286 PROSITE:PS50022 PROSITE:PS50026
SMART:SM00181 SMART:SM00231 INTERPRO:IPR002181 GO:GO:0007165
GO:GO:0007155 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 InterPro:IPR008979
SUPFAM:SSF49785 InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025
SUPFAM:SSF56496 PROSITE:PS51406 Pfam:PF02210
GeneTree:ENSGT00560000076804 EMBL:AAEX03010167 EMBL:AAEX03010168
EMBL:AAEX03010169 EMBL:AAEX03010170 EMBL:AAEX03010171
Ensembl:ENSCAFT00000005604 OMA:YANISID Uniprot:F1PCK3
Length = 669
Score = 170 (64.9 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 58/246 (23%), Positives = 110/246 (44%)
Query: 89 FNGSSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDF 148
FN +SYL G Q L ++ F+ PNG+LL++ A+ +G+ + +YL + V
Sbjct: 348 FNATSYLEVPGRLNQ--DLFSVSFQFRTWNPNGLLLFSQF-AENLGN-VEIYLTESKVGV 403
Query: 149 TFDLGTGAAT---LRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXX 205
++ + + S + ++ G+WH++R A L +D +S + + P
Sbjct: 404 HINITQTKMSQIDISSGSGLNDGQWHEVRFLAKENFAVLTIDGDEASAVRTNSPLQVKTG 463
Query: 206 XXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEA------IQGVNVVNC 259
G + N S V ++ SF GC+Q + +++ +N+ A V++ C
Sbjct: 464 EKYFFGGFLNQMNNSSHSV-LQPSFQGCMQLIQVDDQLVNLYEVAQRRPGSFANVSIDMC 522
Query: 260 A--HPCITQPCG-SGSCVPLYDGYKCVCTQS------CKESHLTEVMCASFDH-GASFLH 309
A C+ C G C + ++C C ++ C S + E C ++ H G + +
Sbjct: 523 AIIDRCVPNHCEHGGKCSQTWHSFQCTCEETGYSGATCHNS-IYEPSCEAYKHLGQTSNY 581
Query: 310 Y-LDPE 314
Y +DP+
Sbjct: 582 YWIDPD 587
Score = 127 (49.8 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 45/189 (23%), Positives = 80/189 (42%)
Query: 86 VPQFNGSSYLRYQGLGEQYLSLLD-LTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDR 144
V F+G L Y+ ++ +L D + + FK E G++L H GD+I L L
Sbjct: 157 VINFDGHVVLPYRFRNKKMKTLKDVIALKFKTSESEGVIL---HGEGQQGDYITLELKKA 213
Query: 145 YVDFTFDLGT-------GAATLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSP 197
+ F+ +LG+ G ++ + + + WH + + R GR L +DR +
Sbjct: 214 KLVFSLNLGSNQLGPIYGHTSVMTGSLLDDHHWHSVVIERQGRSINLTLDR-GVQHFRTN 272
Query: 198 GPFTQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILG--EAIQGVN 255
G F GG+P P + +F GC++ + N + L + ++ N
Sbjct: 273 GEFDYLDLDYEITFGGIPFSG--KPSSSSRKNFKGCMESINYNGINITDLARRKKLEPSN 330
Query: 256 VVNCAHPCI 264
V N + C+
Sbjct: 331 VGNLSFSCV 339
Score = 59 (25.8 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 20/108 (18%), Positives = 46/108 (42%)
Query: 328 LHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYA--HVMYXXXXXX 385
L V R+ F++ + +T + +GL+L++ +++ + + + H+
Sbjct: 354 LEVPGRLNQDLFSVSFQFRTWNPNGLLLFSQFAENLGNVEIYLTESKVGVHINITQTKMS 413
Query: 386 XXXXXXQTKINNGVWH--RLTVHRNFMVV-MHGSSHTRSNKSSKIEFK 430
+ +N+G WH R NF V+ + G + +S ++ K
Sbjct: 414 QIDISSGSGLNDGQWHEVRFLAKENFAVLTIDGDEASAVRTNSPLQVK 461
>UNIPROTKB|J9NWK2 [details] [associations]
symbol:NRXN3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007416 "synapse assembly" evidence=IEA]
[GO:0007268 "synaptic transmission" evidence=IEA] [GO:0004872
"receptor activity" evidence=IEA] InterPro:IPR000742
InterPro:IPR027149 PROSITE:PS50026 SMART:SM00181 InterPro:IPR000152
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 InterPro:IPR001791 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 Pfam:PF02210 GeneTree:ENSGT00560000076996
PANTHER:PTHR10127:SF405 EMBL:AAEX03005887
Ensembl:ENSCAFT00000043139 OMA:FHWDLGQ Uniprot:J9NWK2
Length = 731
Score = 179 (68.1 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 57/227 (25%), Positives = 99/227 (43%)
Query: 92 SSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFD 151
SSYL L + Y S+ L FK +G +L+N DG DFIA+ L Y+ + FD
Sbjct: 506 SSYLSLATL-QAYTSM-HLFFQFKTTSADGFILFNS--GDG-NDFIAVELVKGYIHYVFD 560
Query: 152 LGTGAATLR--SSNPISLGEWHKLRLTRTGRHAY-LQVDRFPSSQILSPGPFTQXXXXXX 208
LG G ++ S P++ +WH + +TR + + L+VD +Q+++
Sbjct: 561 LGNGPNVIKGNSDRPLNDNQWHNVVITRDNSNTHSLKVDTKVVTQVINGAKNLDLKGDLY 620
Query: 209 XXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVN--CAHP---C 263
Y+ + V + F GC+ V +N +++ +A+ + C P C
Sbjct: 621 MAGLAQGMYSNLPKLVASRDGFQGCLASVDLNGRLPDLINDALHRSGQIERGCEGPSTTC 680
Query: 264 ITQPCGS-GSCVPLYDGYKCVCTQS------CKESHLTEVMCASFDH 303
C + G C+ ++G+ C C+ + C + + SF H
Sbjct: 681 QEDSCANQGVCMQQWEGFTCDCSMTSYSGNQCNDREYNLFILGSFFH 727
Score = 131 (51.2 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 74/327 (22%), Positives = 130/327 (39%)
Query: 114 FKAIEPNGILLY-NG---HRADGVG------DFIALYLNDRYVDFTFDLGTGAATLRSSN 163
F+ EPNG++L+ +G R D DF A+ L D + D+G+G ++++
Sbjct: 102 FRTTEPNGLILFTHGKPQERKDARSQKNTKVDFFAVELLDGNLYLLLDMGSGTIKVKATQ 161
Query: 164 P-ISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYN--IV 220
+ GEW+ + + R GR + V+ + + G GG+P+ ++
Sbjct: 162 KKANDGEWYHVDIQRDGRSGTISVNS-RRTPFTASGESEILDLEGDMYLGGLPENRAGLI 220
Query: 221 SPK----VKIKSSFIGCIQKVLINNHELNI--LGEAIQGVNVVN-C----AHPCITQPCG 269
P + ++GCI+ + I+ NI L E V + C A C + PC
Sbjct: 221 LPTELWTAMLNYGYVGCIRDLFIDGRSKNIRQLAEMQNAAGVKSSCSRMSAKQCDSYPCK 280
Query: 270 SGS-CVPLYDGYKCVCTQSCKESHLTEVMCASFDHGASFLHYLDPEIIHSSGLLHYKFQL 328
+ + C ++ + C CT + H C + AS L Y G ++ K +
Sbjct: 281 NNAVCKDGWNRFICDCTGT---GHWGRT-C---EREASILSY--------DGSMYMKIIM 325
Query: 329 HVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXX 388
+ T E ++ R + + GL++ T S S D L L + G +M
Sbjct: 326 PMVMH-TEAE-DVSFRFMSQRAYGLLVATTSRDSADTLRLELDGGRVKLMVNLDCIRINC 383
Query: 389 XXXQ--------TKINNGVWHRLTVHR 407
+ K+N+ WH + V R
Sbjct: 384 NSSKGPETLYAGQKLNDNEWHTVRVVR 410
Score = 108 (43.1 bits), Expect = 1.4e-06, Sum P(3) = 1.4e-06
Identities = 46/221 (20%), Positives = 88/221 (39%)
Query: 28 QLNDGNKIKGRSKECLEDKCNKTPCEHGGKCITTPGSSYCLCP-LGFTGDLCQTRLDLQV 86
++ + +K +C+ PC++ C C C G G C+ + +
Sbjct: 255 EMQNAAGVKSSCSRMSAKQCDSYPCKNNAVCKDGWNRFICDCTGTGHWGRTCER--EASI 312
Query: 87 PQFNGSSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHR--ADGV-----GDFIAL 139
++GS Y++ + D++ F + G+L+ R AD + G + L
Sbjct: 313 LSYDGSMYMKIIMPMVMHTEAEDVSFRFMSQRAYGLLVATTSRDSADTLRLELDGGRVKL 372
Query: 140 YLNDRYVDFTFDLGTGAATLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGP 199
+N + + G TL + ++ EWH +R+ R G+ L VD + + G
Sbjct: 373 MVNLDCIRINCNSSKGPETLYAGQKLNDNEWHTVRVVRRGKSLKLTVDDDVAEGTMV-GD 431
Query: 200 FTQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLIN 240
T+ G + + +S + SSFIG +Q ++ N
Sbjct: 432 HTRLEFHNIET-GIMTEKRYISV---VPSSFIGHLQSLMFN 468
Score = 79 (32.9 bits), Expect = 1.4e-06, Sum P(3) = 1.4e-06
Identities = 17/66 (25%), Positives = 32/66 (48%)
Query: 344 RIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTK-INNGVWHR 402
+ KT+S+ G IL+ S DF+A+ + GY H ++ + +N+ WH
Sbjct: 525 QFKTTSADGFILFN-SGDGNDFIAVELVKGYIHYVFDLGNGPNVIKGNSDRPLNDNQWHN 583
Query: 403 LTVHRN 408
+ + R+
Sbjct: 584 VVITRD 589
Score = 48 (22.0 bits), Expect = 1.4e-06, Sum P(3) = 1.4e-06
Identities = 16/59 (27%), Positives = 31/59 (52%)
Query: 446 IRIDTDYSMQSISGGKFEQLNTD---SGLYVGGVEDIEELTRSKYHHSFKGWISNLILS 501
+++DT Q I+G K L D +GL G ++ +L S+ F+G ++++ L+
Sbjct: 596 LKVDTKVVTQVINGAKNLDLKGDLYMAGLAQGMYSNLPKLVASR--DGFQGCLASVDLN 652
Score = 37 (18.1 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 6/10 (60%), Positives = 9/10 (90%)
Query: 11 DDWNTVRVFR 20
++W+TVRV R
Sbjct: 401 NEWHTVRVVR 410
>UNIPROTKB|F1STP0 [details] [associations]
symbol:FAT3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007156 "homophilic cell adhesion" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005509 "calcium ion binding"
evidence=IEA] InterPro:IPR000742 InterPro:IPR002126
InterPro:IPR015919 InterPro:IPR020894 Pfam:PF00028 PRINTS:PR00205
PROSITE:PS00232 PROSITE:PS50026 PROSITE:PS50268 SMART:SM00112
GO:GO:0016021 GO:GO:0005886 GO:GO:0005509 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025 GO:GO:0007156
SUPFAM:SSF49313 Gene3D:2.60.40.60 GeneTree:ENSGT00700000104156
Pfam:PF02210 OMA:DNGWMVT EMBL:FP102205 EMBL:AEMK01189534
EMBL:CU915514 EMBL:CU928234 EMBL:CU929671 EMBL:FP090895
Ensembl:ENSSSCT00000016292 Uniprot:F1STP0
Length = 4588
Score = 179 (68.1 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 73/261 (27%), Positives = 108/261 (41%)
Query: 45 DKCNKTPCEHGGKCITTPGSS---YCLCPLGFTGDLCQTRLDLQVPQFNGSSYLRYQGLG 101
D C + PC +C+ S C CP G G+ C L F G+SY++Y+ L
Sbjct: 3796 DPCVEKPCPGDMQCVGYEASRRPFLCQCPPGKLGE-CSGHTSLS---FAGNSYIKYR-LS 3850
Query: 102 EQYLSL-LDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLR 160
E L + + ++ NGI++Y RA+ I L + D + F D G+G L
Sbjct: 3851 ENSKEEDFKLALRLRTLQSNGIIMYT--RANPC---IILKIVDGKLWFQLDCGSGPGILG 3905
Query: 161 -SSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGG-VPDYN 218
S ++ G WH + L L +D + +P F G V N
Sbjct: 3906 ISGRAVNDGSWHSVFLELNRNFTSLSLDDSYVERRRAPLYFQTLSTESTIYFGALVQADN 3965
Query: 219 IVS---PKV-KIKSSFIGCIQKVLINNHELNILGEAIQGVNVVN-------CA-HP--CI 264
I S +V ++ S F GC+ V++NN+EL + + VV C +P C
Sbjct: 3966 IRSLTDTRVTQVLSGFQGCLDSVVLNNNELPLQNKRSSFAEVVGLTELKLGCVLYPDACE 4025
Query: 265 TQPCG-SGSCVPLYDGYKCVC 284
PC GSC L G +C C
Sbjct: 4026 RSPCQHGGSCTGLPSGGECTC 4046
>UNIPROTKB|D6RJD2 [details] [associations]
symbol:EGFLAM "Pikachurin" species:9606 "Homo sapiens"
[GO:0005539 "glycosaminoglycan binding" evidence=IEA] [GO:0005604
"basement membrane" evidence=IEA] [GO:0005614 "interstitial matrix"
evidence=IEA] [GO:0010811 "positive regulation of cell-substrate
adhesion" evidence=IEA] [GO:0019800 "peptide cross-linking via
chondroitin 4-sulfate glycosaminoglycan" evidence=IEA] [GO:0030198
"extracellular matrix organization" evidence=IEA] GO:GO:0030198
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0010811 InterPro:IPR001791 SMART:SM00282
PROSITE:PS50025 GO:GO:0005604 GO:GO:0005614 Pfam:PF02210
HOGENOM:HOG000112344 EMBL:AC010338 EMBL:AC010457 EMBL:AC091839
HGNC:HGNC:26810 ChiTaRS:EGFLAM GO:GO:0005539 GO:GO:0019800
EMBL:AC010351 IPI:IPI00968230 ProteinModelPortal:D6RJD2 SMR:D6RJD2
Ensembl:ENST00000508131 ArrayExpress:D6RJD2 Bgee:D6RJD2
Uniprot:D6RJD2
Length = 112
Score = 130 (50.8 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 30/104 (28%), Positives = 52/104 (50%)
Query: 114 FKAIEPNGILLYNGHRADGVG-DFIALYLNDRYVDFTFDLGTGAATLRSSNPISLGEWHK 172
FK +G+LL+ G DFI+L L D + F+++LG+G A++ + + G WH+
Sbjct: 3 FKTTAKDGLLLWRGDSPMRPNSDFISLGLRDGALVFSYNLGSGVASIMVNGSFNDGRWHR 62
Query: 173 LRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPD 216
++ R G+ + VD + + SPG Q GG+ +
Sbjct: 63 VKAVRDGQSGKITVDDYGARTGKSPGMMRQLNINGALYVGGMKE 106
Score = 99 (39.9 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 23/69 (33%), Positives = 34/69 (49%)
Query: 343 MRIKTSSSSGLILWTGSSQSK---DFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGV 399
MR KT++ GL+LW G S + DF++LG+ +G A V N+G
Sbjct: 1 MRFKTTAKDGLLLWRGDSPMRPNSDFISLGLRDG-ALVFSYNLGSGVASIMVNGSFNDGR 59
Query: 400 WHRLTVHRN 408
WHR+ R+
Sbjct: 60 WHRVKAVRD 68
Score = 68 (29.0 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 439 RTGKQCLIRIDTDYSMQS-ISGGKFEQLNTDSGLYVGGVEDI 479
R G+ I +D DY ++ S G QLN + LYVGG+++I
Sbjct: 67 RDGQSGKITVD-DYGARTGKSPGMMRQLNINGALYVGGMKEI 107
>UNIPROTKB|E1BYW1 [details] [associations]
symbol:Gga.53999 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 SMART:SM00179
SMART:SM00181 InterPro:IPR000152 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186
InterPro:IPR001791 SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025
Pfam:PF02210 Pfam:PF12661 GeneTree:ENSGT00700000104308
EMBL:AADN02026348 IPI:IPI00819589 ProteinModelPortal:E1BYW1
Ensembl:ENSGALT00000038754 OMA:ENIDECQ Uniprot:E1BYW1
Length = 1384
Score = 132 (51.5 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 82/389 (21%), Positives = 146/389 (37%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTR---LDLQVPQFNG-SSYLRYQGLGE 102
C PC HGG C+ + C C + G C + + SS++ LG
Sbjct: 747 CLSEPCFHGGLCVDLWTTFRCDCLRPYGGPACSYEHPAVTFGLENSTSFSSFILSDSLGA 806
Query: 103 QYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSS 162
+ +++ ++++PNG+LL + D + +YL + + L T T
Sbjct: 807 DF----NISFFIRSLKPNGLLLQISNETDPC---LTIYLKNGKLKIEM-LSTDTVTF-PE 857
Query: 163 NPISLGEWHKLRLTRTGRHAYL-QVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVS 221
N + G H + L+ G + Q D + L P GG PD +
Sbjct: 858 NLVD-GRRHLVALSFQGGIVGVHQPDTYVELGQLVGRPLL---AGYDVYIGGRPDPDSTD 913
Query: 222 PKVKIKSSFIGCIQKVLINNHELNI-------LGEAI---QGVNVVN-CA--HPCITQPC 268
F GC+Q + +N H++ L + + Q +N+VN C + C ++PC
Sbjct: 914 ---LWGGYFKGCLQDIQLNGHQIEFFQVENYSLPDELNRTQNINLVNGCISDNTCKSEPC 970
Query: 269 GSGS-CVPLYDGYKCVCTQSCKESHLTE-VMCAS---------FDHGASFLHYLDPEIIH 317
+G C+ ++ + C C + E V C S D A ++ L +
Sbjct: 971 QNGGRCIVTWNDFHCSCPANFTGKFCEERVWCESDPCPEATTCIDVPAGYV-CLANATFN 1029
Query: 318 SSGLLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHV 377
SS + + V R G ++ M +T ++L + + D L + I N V
Sbjct: 1030 SSATIEFTTNTSVT-RTLG---SLLMDFRTRDEDAVLL--RAMEEVDSLQIAIKNSSLLV 1083
Query: 378 -MYXXXXXXXXXXXXQTKINNGVWHRLTV 405
+ Q + +G WH +++
Sbjct: 1084 DIRSGNSIEGVSFLSQNAVTDGAWHTISL 1112
Score = 129 (50.5 bits), Expect = 0.00019, P = 0.00019
Identities = 82/365 (22%), Positives = 143/365 (39%)
Query: 26 WIQLNDGNKIKG-RSKECLEDK-CNKT-PCE-HGGKCITTPG--SSYCLCPLGFTGDLCQ 79
W N K+ G ++ +C + C T E HG C PG + C P F+ +
Sbjct: 507 WGGKNCSVKLTGCQTHDCQNEALCIPTYQAESHGHLCQCQPGFYDATCSTPTTFSF-ASR 565
Query: 80 TRLDLQVPQFNGSSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIAL 139
L +++P N S R + GEQ L +++ F+ P+ IL Y GH A+ ++ L
Sbjct: 566 GYLLIELPVNNQS---RREVAGEQ---LASVSLRFRTTLPSAILFYRGHEAE----YLFL 615
Query: 140 YLNDRYVDFTFDLGTGAATLRSSNPISLGEWHKLRLTRTGR-HAYLQVDRFPSSQILSPG 198
L D + L + G WHK+ + L D + +
Sbjct: 616 ELLDGILRTELKRQDEYLLLLEELRVDDGHWHKVEVVLQNTVQLKLWHDSCDAGVCMQSS 675
Query: 199 PFTQXXX-----XXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQG 253
P GG D ++ + + F+GC++ + ++ + + +
Sbjct: 676 PIPHNATPIPHAFLSVYIGGAQDP--LANNTQSQQGFVGCLEDLQVDAEAVLPVALPVSE 733
Query: 254 VNVVN--CAHP--CITQPCGSGS-CVPLYDGYKCVCTQSCKESHLTEVMCASFDHGASFL 308
V+ V C C+++PC G CV L+ ++C C + C S++H A
Sbjct: 734 VSSVTQGCDRTEWCLSEPCFHGGLCVDLWTTFRCDCLRPYGGP-----AC-SYEHPAVTF 787
Query: 309 HYLDPEIIHSSGLLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLAL 368
L+ SS +L G +FNI I++ +GL+L S+++ L +
Sbjct: 788 G-LENSTSFSSFILSDSL---------GADFNISFFIRSLKPNGLLLQI-SNETDPCLTI 836
Query: 369 GIHNG 373
+ NG
Sbjct: 837 YLKNG 841
Score = 117 (46.2 bits), Expect = 2.1e-05, Sum P(3) = 2.1e-05
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 42 CLEDK-CNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRL 82
C+ D C PC++GG+CI T +C CP FTG C+ R+
Sbjct: 959 CISDNTCKSEPCQNGGRCIVTWNDFHCSCPANFTGKFCEERV 1000
Score = 91 (37.1 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 42 CLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLD 83
C C+ C + G C+ PG C+C GFTG C+ +D
Sbjct: 135 CQNSVCSSHLCLNNGTCVEGPGDYACICQPGFTGAHCKDNID 176
Score = 83 (34.3 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 40 KECLED--KCNKTPCEHGGKCITTPGSSY-CLCPLGFTGDLC 78
+ C ED +C PC +GG C + + + C C GF G LC
Sbjct: 329 QHCEEDVNECATDPCHNGGVCFYSQAAGFLCWCQPGFAGRLC 370
Score = 78 (32.5 bits), Expect = 9.9e-08, Sum P(2) = 9.9e-08
Identities = 13/43 (30%), Positives = 21/43 (48%)
Query: 44 EDKCNKTPCEHGGKCITTPGSSYCLCPL---GFTGDLCQTRLD 83
+ C+ +PCE+GG C C+CP+ + G C+ D
Sbjct: 19 DSSCSSSPCENGGSCKDLEAGYQCICPMHPIAYMGINCELLYD 61
Score = 74 (31.1 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 45 DKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLC 78
++C PC++GG C+ C C G++G C
Sbjct: 409 NECESQPCQNGGHCVDLVDGFLCHCLPGYSGYYC 442
Score = 74 (31.1 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 19/49 (38%), Positives = 23/49 (46%)
Query: 37 GRSKECLEDKCNKTPCEHGGKCITTPG-SSY-CLCPLGFTGDLCQTRLD 83
G + E L D C K C C TPG Y C+C GFTG C ++
Sbjct: 53 GINCELLYDACTKHDCPAHMICNKTPGLPEYECICMPGFTGIDCSININ 101
Score = 69 (29.3 bits), Expect = 8.3e-07, Sum P(2) = 8.3e-07
Identities = 12/35 (34%), Positives = 16/35 (45%)
Query: 45 DKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQ 79
D+C PC++G C C C GF G C+
Sbjct: 176 DECASNPCQNGAICRDRVNEYSCFCVPGFQGYNCE 210
Score = 68 (29.0 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 18/45 (40%), Positives = 23/45 (51%)
Query: 45 DKCNKTPCEHGGKC---ITTPGSSY-CLCP-LGFTGDLCQTRLDL 84
++C PC+H G C I SY C C GF GD C+ LD+
Sbjct: 255 NECISQPCQHNGTCHDLINRLTRSYQCDCSDTGFEGDHCE--LDI 297
Score = 64 (27.6 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 45 DKCNKTPCEHGGKCITTPGSSYCLCPLGFTG 75
++C PC++ G C+ C C G+TG
Sbjct: 214 NECASRPCKNNGTCLNEMDHYLCKCIPGYTG 244
Score = 62 (26.9 bits), Expect = 2.1e-05, Sum P(3) = 2.1e-05
Identities = 18/77 (23%), Positives = 33/77 (42%)
Query: 260 AHPCITQPCGS-GSCVPLYDGYKCVCTQSCK----ESHLTEVMCASFDHGASFLHYLDPE 314
A C + PC + G+C L++ + C C+ + ES+ + + HG D +
Sbjct: 1201 ADVCASSPCSNAGTCRDLFNSFSCACSAGWEGLLCESNTDDCQSSPCVHGNCTDRLADFQ 1260
Query: 315 IIHSSGLLHYKFQLHVD 331
G + K ++VD
Sbjct: 1261 CECFRGYIGKKCDINVD 1277
Score = 61 (26.5 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 10/34 (29%), Positives = 16/34 (47%)
Query: 46 KCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQ 79
+C PC + C+ + C C G+TG C+
Sbjct: 299 ECASEPCLNNATCVEGIKNYSCACWTGYTGQHCE 332
Score = 59 (25.8 bits), Expect = 8.8e-06, Sum P(2) = 8.8e-06
Identities = 10/36 (27%), Positives = 17/36 (47%)
Query: 45 DKCNKTPCEHGG-KCITTPGSSYCLCPLGFTGDLCQ 79
++C PC+ +C+ + C C G G+ CQ
Sbjct: 101 NECESNPCKDPRFECVDSVSGYACKCQTGLNGEGCQ 136
Score = 53 (23.7 bits), Expect = 2.1e-05, Sum P(3) = 2.1e-05
Identities = 19/88 (21%), Positives = 36/88 (40%)
Query: 89 FNGSSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDF 148
FN S+ + + +L L + F+ + + +LL D + IA+ + VD
Sbjct: 1028 FNSSATIEFTTNTSVTRTLGSLLMDFRTRDEDAVLLRAMEEVDSLQ--IAIKNSSLLVDI 1085
Query: 149 TFDLGTGAATLRSSNPISLGEWHKLRLT 176
+ S N ++ G WH + L+
Sbjct: 1086 RSGNSIEGVSFLSQNAVTDGAWHTISLS 1113
Score = 42 (19.8 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 7/24 (29%), Positives = 11/24 (45%)
Query: 46 KCNKTPCEHGGKCITTPGSSYCLC 69
+C + PC++G C C C
Sbjct: 475 QCEEGPCKNGAVCEDGIADYTCHC 498
>RGD|1307207 [details] [associations]
symbol:Lama1 "laminin, alpha 1" species:10116 "Rattus
norvegicus" [GO:0002011 "morphogenesis of an epithelial sheet"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005102 "receptor binding" evidence=IEA] [GO:0005201
"extracellular matrix structural constituent" evidence=IEA;ISO]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005578
"proteinaceous extracellular matrix" evidence=ISO] [GO:0005604
"basement membrane" evidence=ISO] [GO:0005606 "laminin-1 complex"
evidence=IEA;ISO] [GO:0005608 "laminin-3 complex" evidence=IEA;ISO]
[GO:0005615 "extracellular space" evidence=IEA;ISO] [GO:0005911
"cell-cell junction" evidence=IEA;ISO] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0007166 "cell surface receptor signaling pathway"
evidence=IEA;ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0009888 "tissue development" evidence=ISO] [GO:0030155
"regulation of cell adhesion" evidence=IEA] [GO:0030334 "regulation
of cell migration" evidence=IEA] [GO:0031012 "extracellular matrix"
evidence=ISO] [GO:0031175 "neuron projection development"
evidence=IEA;ISO] [GO:0043208 "glycosphingolipid binding"
evidence=IEA;ISO] [GO:0043256 "laminin complex" evidence=ISO]
[GO:0045198 "establishment of epithelial cell apical/basal
polarity" evidence=IEA;ISO] [GO:0045995 "regulation of embryonic
development" evidence=IEA] [GO:0060041 "retina development in
camera-type eye" evidence=ISO] [GO:0060441 "epithelial tube
branching involved in lung morphogenesis" evidence=IEA;ISO]
[GO:0060445 "branching involved in salivary gland morphogenesis"
evidence=IEA;ISO] [GO:0061304 "retinal blood vessel morphogenesis"
evidence=IEA;ISO] InterPro:IPR009254 InterPro:IPR010307
Pfam:PF06008 Pfam:PF06009 RGD:1307207 GO:GO:0005615 GO:GO:0030155
GO:GO:0007155 GO:GO:0005911 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0007166 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
GO:GO:0031175 GO:GO:0060441 GO:GO:0060445 Pfam:PF02210
GO:GO:0045198 GO:GO:0045995 GO:GO:0005201 GO:GO:0043208
GO:GO:0002011 GeneTree:ENSGT00700000104140 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0061304 CTD:284217 KO:K05637 OrthoDB:EOG4K3KVB GO:GO:0005606
GO:GO:0005608 EMBL:AB425340 IPI:IPI00363534 RefSeq:NP_001101707.2
UniGene:Rn.2807 Ensembl:ENSRNOT00000023226 GeneID:316758
KEGG:rno:316758 UCSC:RGD:1307207 NextBio:671215 Uniprot:D4A409
Length = 3083
Score = 135 (52.6 bits), Expect = 4.7e-09, Sum P(4) = 4.7e-09
Identities = 46/169 (27%), Positives = 78/169 (46%)
Query: 89 FNGSSYLRYQGLGEQYL--SLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYV 146
F+GS Y + E+ L ++ + I+F PNG+L Y ++G DF+++ L V
Sbjct: 2317 FDGSGY----AVVEKALRPTVTQIIILFSTFSPNGLLFYLA--SNGTKDFLSIELLRGRV 2370
Query: 147 DFTFDLGTGAATLRSSNPISLGEWHKLRLTRTGRHAYLQV-DRFPSS-----QILSPGPF 200
DLG+G TL + + G W+K+ R + L V D + +S Q +PG
Sbjct: 2371 KVMVDLGSGPLTLMTDRRYNNGTWYKIAFQRNRKQGLLAVFDAYDTSDKETKQGETPGAA 2430
Query: 201 TQXXXXXXXXX--GGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNIL 247
+ GG+P V V +S ++GCI+ + I+ ++L
Sbjct: 2431 SDLNRLEKDLIYVGGLPHSKAVRKGVSSRS-YVGCIKNLEISRSTFDLL 2478
Score = 125 (49.1 bits), Expect = 2.7e-07, Sum P(5) = 2.7e-07
Identities = 34/138 (24%), Positives = 60/138 (43%)
Query: 108 LDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSNPISL 167
L + + + +G++ Y H+ D+ L L++ ++F FDLG G + +S
Sbjct: 2745 LQVQLNIRTFASSGLIYYVAHQNQM--DYAVLQLHEGRLNFMFDLGKGRTKVSHPALLSD 2802
Query: 168 GEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSPKVKIK 227
G+WH ++ R A++ VD S + G T GG+P + I
Sbjct: 2803 GKWHTVKTEYIKRKAFMTVDGQESPSVTVVGNATTLDVERKLYLGGLPAHYRARSIGTIT 2862
Query: 228 SSFIGCIQKVLINNHELN 245
S CI V +N+ +L+
Sbjct: 2863 HSIPACIGDVTVNSQQLD 2880
Score = 108 (43.1 bits), Expect = 8.9e-06, Sum P(6) = 8.9e-06
Identities = 37/146 (25%), Positives = 63/146 (43%)
Query: 110 LTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSN-PISLG 168
L + K EP+ +L Y G + DF+A+ + F +DLG+G+ L + I+
Sbjct: 2149 LLLNVKTQEPDNLLFYLGSSSSS--DFLAVEMRRGKAAFLWDLGSGSTRLEFPDVSINND 2206
Query: 169 EWHKLRLTRTGRHAYLQVDRFPSSQ------ILSPG--PFTQXXXXXXXXXGGVPDYNIV 220
+WH + +TR G L V +++ SPG GG+
Sbjct: 2207 KWHSIYITRFGNMGSLSVKEASAAEDPPVRTSKSPGLANVLDINNSTLMFVGGLGGQIKK 2266
Query: 221 SPKVKIKSSFIGCIQKVLINNHELNI 246
SP VK+ + F GC+ + +N + +
Sbjct: 2267 SPAVKV-THFKGCMGEAFLNGKSIGL 2291
Score = 88 (36.0 bits), Expect = 4.4e-05, Sum P(4) = 4.4e-05
Identities = 49/197 (24%), Positives = 85/197 (43%)
Query: 347 TSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGVWHRLTVH 406
T S +GL+ + S+ +KDFL++ + G VM + + NNG W+++
Sbjct: 2342 TFSPNGLLFYLASNGTKDFLSIELLRGRVKVMVDLGSGPLTLMTDR-RYNNGTWYKIAFQ 2400
Query: 407 RNFM--VVMHGSSHTRSNKSSKIEFKCLSIQRLHRTGKQCLIRIDTDYSMQSISGGKFEQ 464
RN ++ ++ S+K +K + L+R K LI + + K +
Sbjct: 2401 RNRKQGLLAVFDAYDTSDKETKQGETPGAASDLNRLEKD-LIYVG------GLPHSKAVR 2453
Query: 465 LNTDSGLYVGGVEDIEELTRSKY---HHSF---KGW----ISNL-ILSNDYQVKLPLSRS 513
S YVG ++++E ++RS + +S+ KG I ++ L Y P S S
Sbjct: 2454 KGVSSRSYVGCIKNLE-ISRSTFDLLRNSYGVRKGCTLEPIQSVSFLKGGYMEMPPKSLS 2512
Query: 514 QGSSCQLTCETLNTGQV 530
SS T T N+ V
Sbjct: 2513 PESSLLATFATKNSSGV 2529
Score = 73 (30.8 bits), Expect = 4.7e-09, Sum P(4) = 4.7e-09
Identities = 15/61 (24%), Positives = 27/61 (44%)
Query: 341 IDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGVW 400
+ + I+T +SSGLI + D+ L +H G + M+ +++G W
Sbjct: 2747 VQLNIRTFASSGLIYYVAHQNQMDYAVLQLHEGRLNFMFDLGKGRTKVSH-PALLSDGKW 2805
Query: 401 H 401
H
Sbjct: 2806 H 2806
Score = 70 (29.7 bits), Expect = 9.2e-09, Sum P(4) = 9.2e-09
Identities = 22/75 (29%), Positives = 36/75 (48%)
Query: 338 EFNIDMRIKTSSSSGLILWTGSSQSK-DFLALGIHNGYA--HVMYXXXXXXXXXXXXQTK 394
+ NI + +TSS +G++L G S +K D + L I +G HV T+
Sbjct: 2921 DLNITLEFRTSSKNGVLL--GISSAKVDAIGLEIVDGKVSFHVNNGAGRITATYKPRATR 2978
Query: 395 -INNGVWHRLTVHRN 408
+ +G WH L H++
Sbjct: 2979 TLCDGKWHTLHAHKS 2993
Score = 64 (27.6 bits), Expect = 4.7e-09, Sum P(4) = 4.7e-09
Identities = 21/77 (27%), Positives = 35/77 (45%)
Query: 438 HRTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVEDIEELTRSKYHHSFKGWISN 497
H++ + ++ +D D +T+ +YVGG + SF+G + N
Sbjct: 2991 HKSRHRIVLTVDGDAVRAESPHTHSTSADTNDPIYVGGYPAHVKQNCLSSRASFRGCVRN 3050
Query: 498 LILSNDYQVK-LPLSRS 513
L LS QV+ L LSR+
Sbjct: 3051 LELSRGSQVQSLDLSRA 3067
Score = 61 (26.5 bits), Expect = 6.3e-06, Sum P(3) = 6.3e-06
Identities = 18/56 (32%), Positives = 31/56 (55%)
Query: 469 SGLYVGGVEDIEELTRSKYHHSFKGWISNLILSNDYQVKLPLSRSQGSSCQLTCET 524
S LY+GG+ + + + SF G I N+++ D Q+ L +R+ GS Q+ +T
Sbjct: 2627 SNLYIGGLPEGKGTPMIRMRTSFHGCIKNVVI--DAQL-LDFTRAAGSE-QVELDT 2678
Score = 51 (23.0 bits), Expect = 4.7e-09, Sum P(4) = 4.7e-09
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 66 YCLCPLGFTGDLCQTRL 82
+C CP G+TG C+ L
Sbjct: 715 HCECPQGYTGTSCEACL 731
Score = 47 (21.6 bits), Expect = 1.1e-08, Sum P(4) = 1.1e-08
Identities = 12/34 (35%), Positives = 13/34 (38%)
Query: 47 CNKTPCEHG-GKCITTPGSSYCLCPLGFTGDLCQ 79
C C H C P S CLCP G C+
Sbjct: 1002 CTPCDCAHTQNNC--DPDSGECLCPPHTHGLKCE 1033
Score = 44 (20.5 bits), Expect = 2.3e-08, Sum P(4) = 2.3e-08
Identities = 7/13 (53%), Positives = 8/13 (61%)
Query: 67 CLCPLGFTGDLCQ 79
C+CP G G CQ
Sbjct: 1369 CVCPPGTAGHSCQ 1381
Score = 44 (20.5 bits), Expect = 2.3e-08, Sum P(4) = 2.3e-08
Identities = 14/48 (29%), Positives = 18/48 (37%)
Query: 32 GNKIKGRSKECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQ 79
GN + C + CN H C G C+C G TG C+
Sbjct: 1504 GNP-RAAGGSCQKCDCNPQGSVHSD-CDRASGQ--CVCKPGATGLHCE 1547
Score = 42 (19.8 bits), Expect = 3.5e-08, Sum P(4) = 3.5e-08
Identities = 14/48 (29%), Positives = 20/48 (41%)
Query: 31 DGNKIKGRSKECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLC 78
D + + S C++D + GK PG C C G+ GD C
Sbjct: 405 DCDPVGSLSSVCIKDDLHADLAN--GKW---PGQ--CPCRKGYAGDKC 445
Score = 40 (19.1 bits), Expect = 5.6e-08, Sum P(4) = 5.6e-08
Identities = 10/33 (30%), Positives = 13/33 (39%)
Query: 48 NKTPCEHG--GKCITTPGSSYCLCPLGFTGDLC 78
N PC+ G P + CLC G+ C
Sbjct: 457 NCVPCDCSTVGSVNEDPCTEPCLCKKNVEGENC 489
Score = 40 (19.1 bits), Expect = 5.6e-08, Sum P(4) = 5.6e-08
Identities = 13/39 (33%), Positives = 14/39 (35%)
Query: 44 EDKCNKTPCEHGGKCITTPG----SSYCLCPLGFTGDLC 78
E C C G T+P S C C GF G C
Sbjct: 1045 EQGCQACNCSVVGS--TSPQCDVLSGQCSCKEGFGGQSC 1081
Score = 39 (18.8 bits), Expect = 8.9e-06, Sum P(6) = 8.9e-06
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 305 ASFLHYLDPEIIHSSGLLHYK 325
AS L+ L+ ++I+ GL H K
Sbjct: 2430 ASDLNRLEKDLIYVGGLPHSK 2450
Score = 37 (18.1 bits), Expect = 1.1e-07, Sum P(4) = 1.1e-07
Identities = 8/23 (34%), Positives = 8/23 (34%)
Query: 56 GKCITTPGSSYCLCPLGFTGDLC 78
G C T S C C G C
Sbjct: 1114 GLCSCTEDSGTCSCKENVLGPQC 1136
Score = 37 (18.1 bits), Expect = 2.7e-07, Sum P(5) = 2.7e-07
Identities = 7/22 (31%), Positives = 14/22 (63%)
Query: 98 QGLGEQYLSLLDLTIVFKAIEP 119
QGL + ++ + + + KA+EP
Sbjct: 1335 QGLQQSRIANISMEVGRKAVEP 1356
>UNIPROTKB|F1PJH2 [details] [associations]
symbol:FAT3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007156 "homophilic cell adhesion" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005509 "calcium ion binding"
evidence=IEA] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR002126 InterPro:IPR015919 InterPro:IPR018097
InterPro:IPR020894 Pfam:PF00008 Pfam:PF00028 Pfam:PF07645
PRINTS:PR00205 PROSITE:PS00232 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS50268 SMART:SM00112 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 GO:GO:0016021 GO:GO:0005886 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 InterPro:IPR001791 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 GO:GO:0007156 SUPFAM:SSF49313 Gene3D:2.60.40.60
GeneTree:ENSGT00700000104156 Pfam:PF02210 OMA:DNGWMVT
EMBL:AAEX03012734 Ensembl:ENSCAFT00000006830 Uniprot:F1PJH2
Length = 4589
Score = 176 (67.0 bits), Expect = 5.6e-09, Sum P(2) = 5.6e-09
Identities = 74/262 (28%), Positives = 109/262 (41%)
Query: 45 DKCNKTPCEHGGKCITTPGSS--Y-CLCPLGFTGDLCQTRLDLQVPQFNGSSYLRYQGLG 101
D C + PC +C+ S Y C CP G G+ C L F G+SY++Y+ L
Sbjct: 3797 DPCMEKPCPGDMQCVGYEASRRPYLCQCPPGKLGE-CSGHTSLS---FAGNSYIKYR-LS 3851
Query: 102 EQYLSL-LDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLR 160
E L + + ++ NGI++Y RA+ + L + D + F D G G L
Sbjct: 3852 ENSKEEDFRLALRLRTLQSNGIIMYT--RANPC---LILKIVDGKLWFQLDCGNGPGILG 3906
Query: 161 -SSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGG-VPDYN 218
S ++ G WH + L L +D + +P F G V N
Sbjct: 3907 ISGRAVNDGSWHSVFLELNRNFTSLSLDDSYVERRRAPLYFQTLSTESTIYFGALVQADN 3966
Query: 219 IVS---PKV-KIKSSFIGCIQKVLINNHELNILGEAIQGVNVVN-------CA-HP--CI 264
I S +V ++ S F GC+ V++NN+EL + + VV C +P C
Sbjct: 3967 IRSLTDTRVTQVLSGFQGCLDSVVLNNNELPLQNKRSSFAEVVGLTELKLGCVLYPDACE 4026
Query: 265 TQPCG-SGSCVPLYDG-YKCVC 284
PC GSC L G Y+C C
Sbjct: 4027 RSPCQHGGSCSGLPSGGYQCTC 4048
Score = 55 (24.4 bits), Expect = 5.6e-09, Sum P(2) = 5.6e-09
Identities = 15/37 (40%), Positives = 18/37 (48%)
Query: 263 CITQPC-GSGSCVPLYDGYKCVCTQSCKESHLTEVMC 298
C PC GSC P+ G +C +CK LT V C
Sbjct: 4064 CFPNPCQNGGSCDPI--GNTFIC--NCKAG-LTGVTC 4095
>UNIPROTKB|F1S2Z4 [details] [associations]
symbol:LOC100525900 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0031012 "extracellular matrix" evidence=IDA]
[GO:0042383 "sarcolemma" evidence=IEA] [GO:0032224 "positive
regulation of synaptic transmission, cholinergic" evidence=IEA]
[GO:0007411 "axon guidance" evidence=IEA] [GO:0005605 "basal
lamina" evidence=IEA] Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 InterPro:IPR001791 Pfam:PF00054
SMART:SM00282 PROSITE:PS50025 Pfam:PF02210
GeneTree:ENSGT00700000104140 EMBL:CU480638 EMBL:CU570858
EMBL:CU914700 Ensembl:ENSSSCT00000004648 OMA:ENANERN Uniprot:F1S2Z4
Length = 925
Score = 124 (48.7 bits), Expect = 6.4e-09, Sum P(2) = 6.4e-09
Identities = 41/171 (23%), Positives = 79/171 (46%)
Query: 88 QFNGSSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVD 147
QF+G Y + ++ + F+ + +L+Y R + DF+++ L D ++
Sbjct: 144 QFDGEGYALVSRPIRWFPNISTVMFKFRTFSSSALLMYLATR--DLKDFMSVELTDGHIK 201
Query: 148 FTFDLGTGAATLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQ-----ILSPGP-F- 200
++DLG+G A++ S+ + G+W L+R + A + + ++Q SPG F
Sbjct: 202 VSYDLGSGMASVVSNQNHNDGKWKSFTLSRIQKQANISIVDIDTNQEETIATTSPGNNFG 261
Query: 201 TQXXXXXXXXXGGVPDYNIVS----PKVKIKSSFIGCIQKVLINNHELNIL 247
GG+P +S P+V +K + GC++ + I+ NIL
Sbjct: 262 LDLKADDKIYFGGLPTLRNLSMKARPEVNLKK-YSGCLKDIEISRTPYNIL 311
Score = 94 (38.1 bits), Expect = 6.4e-09, Sum P(2) = 6.4e-09
Identities = 24/91 (26%), Positives = 40/91 (43%)
Query: 341 IDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGVW 400
I+ ++T + SGL+ + DF + + NG + Y TKIN+G W
Sbjct: 592 IEFEVRTEAESGLLFYMARINHADFATVQLRNGLPYFSYDLGSGDTNTMI-PTKINDGQW 650
Query: 401 HRLTVHR----NFMVVMHGSSHTRSNKSSKI 427
H++ + R + V S+ T S K + I
Sbjct: 651 HKIKIMRIKQEGILDVDGASNRTISPKKADI 681
Score = 52 (23.4 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 29/110 (26%), Positives = 50/110 (45%)
Query: 415 GSSHTRSNKSSKI---EFKCLSIQRLHRTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGL 471
GS T + +KI ++ + I R+ + G ++ +D S ++IS K + L+ L
Sbjct: 633 GSGDTNTMIPTKINDGQWHKIKIMRIKQEG---ILDVD-GASNRTISPKKADILDVVGML 688
Query: 472 YVGGVEDIEELTR--SKYHHSFKGWISNLILSN-DYQVKLPLSRSQGSSC 518
YVGG+ I TR +S G I N ++ ++ P S +C
Sbjct: 689 YVGGLP-INYTTRRIGPVTYSIDGCIRNFQMTEAPADLERPTSSYHVGTC 737
>FB|FBgn0024836 [details] [associations]
symbol:stan "starry night" species:7227 "Drosophila
melanogaster" [GO:0005886 "plasma membrane" evidence=IEA;ISS]
[GO:0007156 "homophilic cell adhesion" evidence=ISS;IDA;TAS]
[GO:0004930 "G-protein coupled receptor activity" evidence=IEA;ISS]
[GO:0016339 "calcium-dependent cell-cell adhesion"
evidence=ISS;IMP] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEP;IMP;NAS] [GO:0007409 "axonogenesis" evidence=IMP;NAS]
[GO:0005911 "cell-cell junction" evidence=IDA] [GO:0005057
"receptor signaling protein activity" evidence=ISM;IMP] [GO:0016358
"dendrite development" evidence=IEP] [GO:0007367 "segment polarity
determination" evidence=IEP;IMP] [GO:0016021 "integral to membrane"
evidence=IEA;ISM;ISS;NAS] [GO:0048813 "dendrite morphogenesis"
evidence=IMP;TAS] [GO:0007165 "signal transduction" evidence=ISS]
[GO:0004888 "transmembrane signaling receptor activity"
evidence=ISS] [GO:0050839 "cell adhesion molecule binding"
evidence=ISS] [GO:0005887 "integral to plasma membrane"
evidence=ISS] [GO:0004872 "receptor activity" evidence=ISS]
[GO:0016318 "ommatidial rotation" evidence=IMP;NAS] [GO:0048057
"R3/R4 development" evidence=IMP] [GO:0042067 "establishment of
ommatidial planar polarity" evidence=IMP;TAS] [GO:0007164
"establishment of tissue polarity" evidence=NAS] [GO:0016319
"mushroom body development" evidence=IMP] [GO:0030177 "positive
regulation of Wnt receptor signaling pathway" evidence=NAS]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=TAS] [GO:0007464 "R3/R4 cell fate commitment"
evidence=NAS] [GO:0001736 "establishment of planar polarity"
evidence=IMP;TAS] [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0007218 "neuropeptide signaling pathway" evidence=IEA]
[GO:0001738 "morphogenesis of a polarized epithelium" evidence=IMP]
[GO:0007411 "axon guidance" evidence=IMP] [GO:0050770 "regulation
of axonogenesis" evidence=IDA] [GO:0051963 "regulation of synapse
assembly" evidence=IDA] [GO:0035159 "regulation of tube length,
open tracheal system" evidence=IMP] [GO:0070593 "dendrite
self-avoidance" evidence=IMP] [GO:0090175 "regulation of
establishment of planar polarity" evidence=IGI] InterPro:IPR000203
InterPro:IPR000742 InterPro:IPR000832 InterPro:IPR001879
InterPro:IPR001881 InterPro:IPR002126 InterPro:IPR015919
InterPro:IPR017981 InterPro:IPR020894 Pfam:PF00002 Pfam:PF00008
Pfam:PF00028 Pfam:PF01825 PRINTS:PR00205 PRINTS:PR00249
PROSITE:PS00232 PROSITE:PS00649 PROSITE:PS00650 PROSITE:PS50026
PROSITE:PS50221 PROSITE:PS50227 PROSITE:PS50261 PROSITE:PS50268
SMART:SM00112 SMART:SM00179 SMART:SM00181 SMART:SM00303
EMBL:AE013599 GO:GO:0007411 GO:GO:0005887 GO:GO:0016055
GO:GO:0004930 GO:GO:0007218 GO:GO:0007464 GO:GO:0005509
GO:GO:0005911 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0048813 GO:GO:0050770 GO:GO:0051963
GO:GO:0016319 GO:GO:0005057 PROSITE:PS01186 eggNOG:NOG12793
GO:GO:0050839 GO:GO:0007367 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 SMART:SM00180 SMART:SM00282 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 GO:GO:0016339 GO:GO:0007156
GO:GO:0004888 GO:GO:0030178 GO:GO:0030177 GO:GO:0035159
SUPFAM:SSF49313 InterPro:IPR022624 Pfam:PF12003 Gene3D:2.60.40.60
GeneTree:ENSGT00700000104170 Pfam:PF02210 KO:K04600 OMA:YILRAYA
GO:GO:0070593 EMBL:AF172329 EMBL:AB028498 RefSeq:NP_001188903.1
RefSeq:NP_724962.3 UniGene:Dm.4360 ProteinModelPortal:Q9V5N8
SMR:Q9V5N8 IntAct:Q9V5N8 STRING:Q9V5N8 PaxDb:Q9V5N8
EnsemblMetazoa:FBtr0088214 EnsemblMetazoa:FBtr0303223 GeneID:36125
KEGG:dme:Dmel_CG11895 CTD:36125 FlyBase:FBgn0024836
InParanoid:Q9V5N8 OrthoDB:EOG4X69Q2 PhylomeDB:Q9V5N8
GenomeRNAi:36125 NextBio:796977 Bgee:Q9V5N8 GermOnline:CG11895
GO:GO:0048057 Uniprot:Q9V5N8
Length = 3579
Score = 157 (60.3 bits), Expect = 6.5e-09, Sum P(2) = 6.5e-09
Identities = 44/152 (28%), Positives = 78/152 (51%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQYLS 106
C CE G C++ SS P +T C+ L+ F +S+L ++ L +++
Sbjct: 1527 CPSETCEGGLSCLSNYPSSQ---PPPYTAT-CE----LRARAFGRNSFLTFESLKQRHR- 1577
Query: 107 LLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLR--SSNP 164
+L + F ++ NG+LLYNG R + + DFIAL +++ +V F+F LG + +
Sbjct: 1578 -FNLKLRFATVQENGLLLYNG-RYNELHDFIALEIHEGHVSFSFSLGDHSERISVIQEAK 1635
Query: 165 ISLGEWHKLRLTRTGRHAYLQVDRFPSSQILS 196
+S G+WH++ + R L +D ++ LS
Sbjct: 1636 VSDGKWHQVEVVYLNRSVTLVLDNCDTAIALS 1667
Score = 136 (52.9 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 54/220 (24%), Positives = 95/220 (43%)
Query: 263 CITQPC-GSGSCVPLYDGYKCVCT-----QSCKES--HLTEVMCASFDHGASFL-HYLD- 312
C + PC G+CV GY CVC Q+C+ HL + + G S L +Y
Sbjct: 1486 CYSDPCQNGGTCVRREGGYTCVCPSTHTGQNCETGVGHLRPCPSETCEGGLSCLSNYPSS 1545
Query: 313 --PEIIHSSGLLHYKFQLH--VDFRITG--YEFNIDMRIKTSSSSGLILWTGS-SQSKDF 365
P + L F + + F + FN+ +R T +GL+L+ G ++ DF
Sbjct: 1546 QPPPYTATCELRARAFGRNSFLTFESLKQRHRFNLKLRFATVQENGLLLYNGRYNELHDF 1605
Query: 366 LALGIHNGYAHVMYXXXXXXXXXXXXQ-TKINNGVWHRLTV---HRNFMVVMHGSSHTRS 421
+AL IH G+ + Q K+++G WH++ V +R+ +V+ T
Sbjct: 1606 IALEIHEGHVSFSFSLGDHSERISVIQEAKVSDGKWHQVEVVYLNRSVTLVLDNCD-TAI 1664
Query: 422 NKSSKI--EFKCLSIQRLHRTGKQCLIRIDTDYSMQSISG 459
S ++ + C + L + K+C + +T + ++G
Sbjct: 1665 ALSGQLGDRWSCANRTTL-KLDKRCSLLTETCHRFLDLTG 1703
Score = 72 (30.4 bits), Expect = 6.5e-09, Sum P(2) = 6.5e-09
Identities = 17/50 (34%), Positives = 20/50 (40%)
Query: 249 EAIQGVNVVNCAHPCITQPCGSGSC---VPLYDGYKCVCTQSCKESHLTE 295
E G +CA C +PC SG C L GY C C S + E
Sbjct: 1989 ECDSGYVGTDCAPICTVRPCASGVCRANTSLPRGYDCECNSSSRHGDYCE 2038
Score = 69 (29.3 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 19/79 (24%), Positives = 33/79 (41%)
Query: 212 GGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNCAH--P-CITQPC 268
GG+P P F+GCI + I++ +++ + C P C ++PC
Sbjct: 1708 GGLPRIPAHFPVTN--RDFVGCISDLRIDDRFVDLNSYVADNGTLAGCPQKAPLCQSEPC 1765
Query: 269 -GSGSCVPLYDGYKCVCTQ 286
G+C + Y C C +
Sbjct: 1766 FNGGTCREGWGTYSCECPE 1784
Score = 67 (28.6 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 17/39 (43%), Positives = 21/39 (53%)
Query: 67 CLCPLGFTGD----LCQTRLDL--QVPQFNGSSYLRYQG 99
C CP GFTG LC T +DL P NG + +R +G
Sbjct: 1464 CSCPEGFTGSKEHYLCDTEVDLCYSDPCQNGGTCVRREG 1502
Score = 37 (18.1 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 12/49 (24%), Positives = 20/49 (40%)
Query: 274 VPLYDGYKCVCTQSCKESHLTEVMCASFDHGASFLHYLDPEIIHSSGLL 322
+P +DG + +++ L C A + +DPE I LL
Sbjct: 2766 IPDFDGD---FNPAAQQAILVNCSCTHISSYAVIVDVIDPEDIPEPSLL 2811
>MGI|MGI:99892 [details] [associations]
symbol:Lama1 "laminin, alpha 1" species:10090 "Mus musculus"
[GO:0002011 "morphogenesis of an epithelial sheet" evidence=IMP]
[GO:0005102 "receptor binding" evidence=IEA] [GO:0005201
"extracellular matrix structural constituent" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IDA] [GO:0005604 "basement membrane"
evidence=ISO;IDA] [GO:0005605 "basal lamina" evidence=TAS]
[GO:0005606 "laminin-1 complex" evidence=ISO;IDA] [GO:0005608
"laminin-3 complex" evidence=ISO] [GO:0005615 "extracellular space"
evidence=ISO] [GO:0005911 "cell-cell junction" evidence=IDA]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0007166 "cell surface
receptor signaling pathway" evidence=IDA] [GO:0009888 "tissue
development" evidence=IMP] [GO:0030155 "regulation of cell
adhesion" evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0031012 "extracellular matrix" evidence=IDA]
[GO:0031175 "neuron projection development" evidence=IDA]
[GO:0043208 "glycosphingolipid binding" evidence=IDA] [GO:0043256
"laminin complex" evidence=IDA] [GO:0045198 "establishment of
epithelial cell apical/basal polarity" evidence=IMP] [GO:0045995
"regulation of embryonic development" evidence=IEA] [GO:0060041
"retina development in camera-type eye" evidence=IMP] [GO:0060441
"epithelial tube branching involved in lung morphogenesis"
evidence=IMP] [GO:0060445 "branching involved in salivary gland
morphogenesis" evidence=IMP] [GO:0061304 "retinal blood vessel
morphogenesis" evidence=IMP] InterPro:IPR009254 InterPro:IPR010307
Pfam:PF06008 Pfam:PF06009 MGI:MGI:99892 GO:GO:0030155 GO:GO:0007155
GO:GO:0005911 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 Reactome:REACT_127416 GO:GO:0007166
PROSITE:PS01186 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
Pfam:PF00054 SMART:SM00180 SMART:SM00282 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 GO:GO:0031175 GO:GO:0060441
GO:GO:0060445 Pfam:PF02210 GO:GO:0045198 GO:GO:0045995
GO:GO:0005201 GO:GO:0043208 GO:GO:0002011 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0061304 CTD:284217 eggNOG:NOG247347 HOGENOM:HOG000293201
HOVERGEN:HBG052298 KO:K05637 OrthoDB:EOG4K3KVB GO:GO:0005606
EMBL:J04064 EMBL:X07737 EMBL:X13459 EMBL:M36775 IPI:IPI00113726
PIR:A31771 RefSeq:NP_032506.2 UniGene:Mm.303386 PDB:2JD4
PDBsum:2JD4 ProteinModelPortal:P19137 SMR:P19137 MINT:MINT-2635122
STRING:P19137 PhosphoSite:P19137 PaxDb:P19137 PRIDE:P19137
GeneID:16772 KEGG:mmu:16772 UCSC:uc008dkh.1 InParanoid:P19137
EvolutionaryTrace:P19137 NextBio:290602 CleanEx:MM_LAMA1
Genevestigator:P19137 GermOnline:ENSMUSG00000032796 Uniprot:P19137
Length = 3084
Score = 138 (53.6 bits), Expect = 6.9e-09, Sum P(4) = 6.9e-09
Identities = 50/182 (27%), Positives = 83/182 (45%)
Query: 89 FNGSSYLRYQGLGEQYL--SLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYV 146
F+GS Y + E+ L ++ + I+F PNG+L Y ++G DF+++ L V
Sbjct: 2318 FDGSGY----AMVEKTLRPTVTQIVILFSTFSPNGLLFYLA--SNGTKDFLSIELVRGRV 2371
Query: 147 DFTFDLGTGAATLRSSNPISLGEWHKLRLTRTGRHAYLQV-DRFPSS-----QILSPGPF 200
DLG+G TL + + G W+K+ R + L V D + +S Q +PG
Sbjct: 2372 KVMVDLGSGPLTLMTDRRYNNGTWYKIAFQRNRKQGLLAVFDAYDTSDKETKQGETPGAA 2431
Query: 201 TQXXXXXXXXX--GGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVN 258
+ GG+P V V +S ++GCI+ + I+ ++L + GV
Sbjct: 2432 SDLNRLEKDLIYVGGLPHSKAVRKGVSSRS-YVGCIKNLEISRSTFDLLRNSY-GVRK-G 2488
Query: 259 CA 260
CA
Sbjct: 2489 CA 2490
Score = 128 (50.1 bits), Expect = 4.7e-07, Sum P(4) = 4.7e-07
Identities = 42/178 (23%), Positives = 73/178 (41%)
Query: 108 LDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSNPISL 167
L + + + +G++ Y H+ D+ L L + + F FDLG G + +S
Sbjct: 2746 LQVQLSIRTFASSGLIYYVAHQNQM--DYATLQLQEGRLHFMFDLGKGRTKVSHPALLSD 2803
Query: 168 GEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSPKVKIK 227
G+WH ++ R A++ VD S + G T GG+P + I
Sbjct: 2804 GKWHTVKTEYIKRKAFMTVDGQESPSVTVVGNATTLDVERKLYLGGLPSHYRARNIGTIT 2863
Query: 228 SSFIGCIQKVLINNHELN----ILGEAIQGVNVVNCAHPCITQPCGSGSCVPLYDGYK 281
S CI ++++N +L+ + A+ VV + GSG + +GYK
Sbjct: 2864 HSIPACIGEIMVNGQQLDKDRPLSASAVDRCYVV-AQEGTFFE--GSGYAALVKEGYK 2918
Score = 121 (47.7 bits), Expect = 7.0e-07, Sum P(5) = 7.0e-07
Identities = 40/146 (27%), Positives = 62/146 (42%)
Query: 110 LTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSN-PISLG 168
L + K EP+ +L Y G + DF+A+ + V F +DLG+G+ L I+
Sbjct: 2150 LILNVKTQEPDNLLFYLGSSSSS--DFLAVEMRRGKVAFLWDLGSGSTRLEFPEVSINNN 2207
Query: 169 EWHKLRLTRTGRHAYLQV------DRFPSSQILSPGP--FTQXXXXXXXXXGGVPDYNIV 220
WH + +TR G L V + P SPGP GG+
Sbjct: 2208 RWHSIYITRFGNMGSLSVKEASAAENPPVRTSKSPGPSKVLDINNSTLMFVGGLGGQIKK 2267
Query: 221 SPKVKIKSSFIGCIQKVLINNHELNI 246
SP VK+ + F GC+ + +N + +
Sbjct: 2268 SPAVKV-THFKGCMGEAFLNGKSIGL 2292
Score = 92 (37.4 bits), Expect = 0.00040, Sum P(4) = 0.00040
Identities = 37/145 (25%), Positives = 66/145 (45%)
Query: 110 LTIVFKAIEPNGILLYN-GHRADGVGD------FIALYLNDRYVDFTFDLGTGAATLRS- 161
L F +GILL G A+ G F ++ L + ++ + G G + ++
Sbjct: 2518 LLATFATKNSSGILLVALGKDAEEAGGAQAHVPFFSIMLLEGRIEVHVNSGDGTSLRKAL 2577
Query: 162 ----SNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXX--GGVP 215
+ S G+ H + L R R +QVD S + GP T+ GG+P
Sbjct: 2578 LHAPTGSYSDGQEHSISLVRNRRVITIQVDE-NSPVEMKLGPLTEGKTIDISNLYIGGLP 2636
Query: 216 DYNIVSPKVKIKSSFIGCIQKVLIN 240
+ + +P +K+++SF GCI+ V+++
Sbjct: 2637 E-DKATPMLKMRTSFHGCIKNVVLD 2660
Score = 85 (35.0 bits), Expect = 7.5e-07, Sum P(3) = 7.5e-07
Identities = 34/143 (23%), Positives = 65/143 (45%)
Query: 347 TSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGVWHRLTVH 406
T S +GL+ + S+ +KDFL++ + G VM + + NNG W+++
Sbjct: 2343 TFSPNGLLFYLASNGTKDFLSIELVRGRVKVMVDLGSGPLTLMTDR-RYNNGTWYKIAFQ 2401
Query: 407 RNFM--VVMHGSSHTRSNKSSKIEFKCLSIQRLHRTGKQCLIRIDTDYSMQSISGGKFEQ 464
RN ++ ++ S+K +K + L+R K LI + + K +
Sbjct: 2402 RNRKQGLLAVFDAYDTSDKETKQGETPGAASDLNRLEKD-LIYVG------GLPHSKAVR 2454
Query: 465 LNTDSGLYVGGVEDIEELTRSKY 487
S YVG ++++E ++RS +
Sbjct: 2455 KGVSSRSYVGCIKNLE-ISRSTF 2476
Score = 71 (30.1 bits), Expect = 6.9e-09, Sum P(4) = 6.9e-09
Identities = 15/61 (24%), Positives = 26/61 (42%)
Query: 341 IDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGVW 400
+ + I+T +SSGLI + D+ L + G H M+ +++G W
Sbjct: 2748 VQLSIRTFASSGLIYYVAHQNQMDYATLQLQEGRLHFMFDLGKGRTKVSH-PALLSDGKW 2806
Query: 401 H 401
H
Sbjct: 2807 H 2807
Score = 70 (29.7 bits), Expect = 3.8e-07, Sum P(3) = 3.8e-07
Identities = 26/89 (29%), Positives = 43/89 (48%)
Query: 437 LHRTGKQCLIRIDTDYSMQSISGGKFEQLNTD-SGLYVGGVEDIEELTRSKYHHSFKGWI 495
L R + I++D + ++ G E D S LY+GG+ + + K SF G I
Sbjct: 2595 LVRNRRVITIQVDENSPVEMKLGPLTEGKTIDISNLYIGGLPEDKATPMLKMRTSFHGCI 2654
Query: 496 SNLILSNDYQVKLPLSRSQGSSCQLTCET 524
N++L D Q+ L + + GS Q+ +T
Sbjct: 2655 KNVVL--DAQL-LDFTHATGSE-QVELDT 2679
Score = 63 (27.2 bits), Expect = 4.2e-08, Sum P(4) = 4.2e-08
Identities = 20/75 (26%), Positives = 35/75 (46%)
Query: 338 EFNIDMRIKTSSSSGLILWTGSSQSK-DFLALGIHNGYA--HVMYXXXXXXXXXXXXQTK 394
+ NI + +T+S +G++L G S +K D + L I +G HV +
Sbjct: 2922 DLNITLEFRTTSKNGVLL--GISSAKVDAIGLEIVDGKVLFHVNNGAGRITATYQPRAAR 2979
Query: 395 -INNGVWHRLTVHRN 408
+ +G WH L H++
Sbjct: 2980 ALCDGKWHTLQAHKS 2994
Score = 61 (26.5 bits), Expect = 6.9e-09, Sum P(4) = 6.9e-09
Identities = 24/79 (30%), Positives = 43/79 (54%)
Query: 438 HRTGKQCLIRIDTDYSMQSISGGKFE-QLNTDSGLYVGGVE-DIEELTRSKYHHSFKGWI 495
H++ + ++ +D + S+++ S +T+ +YVGG I++ S SF+G +
Sbjct: 2992 HKSKHRIVLTVDGN-SVRAESPHTHSTSADTNDPIYVGGYPAHIKQNCLSS-RASFRGCV 3049
Query: 496 SNLILSNDYQVK-LPLSRS 513
NL LS QV+ L LSR+
Sbjct: 3050 RNLRLSRGSQVQSLDLSRA 3068
Score = 51 (23.0 bits), Expect = 6.9e-09, Sum P(4) = 6.9e-09
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 66 YCLCPLGFTGDLCQTRL 82
+C CP G+TG C+ L
Sbjct: 715 HCECPQGYTGTSCEACL 731
Score = 49 (22.3 bits), Expect = 1.1e-08, Sum P(4) = 1.1e-08
Identities = 12/34 (35%), Positives = 13/34 (38%)
Query: 47 CNKTPCEHG-GKCITTPGSSYCLCPLGFTGDLCQ 79
C C H C P S CLCP G C+
Sbjct: 1002 CTPCDCAHTQNNC--DPASGECLCPPHTQGLKCE 1033
Score = 44 (20.5 bits), Expect = 3.3e-08, Sum P(4) = 3.3e-08
Identities = 7/13 (53%), Positives = 8/13 (61%)
Query: 67 CLCPLGFTGDLCQ 79
C+CP G G CQ
Sbjct: 1369 CVCPPGTAGHSCQ 1381
Score = 42 (19.8 bits), Expect = 5.2e-08, Sum P(4) = 5.2e-08
Identities = 14/48 (29%), Positives = 17/48 (35%)
Query: 32 GNKIKGRSKECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQ 79
GN + C CN H C G C+C G TG C+
Sbjct: 1504 GNP-RAAGGSCQTCDCNPQGSVHSD-CDRASGQ--CVCKPGATGLHCE 1547
Score = 41 (19.5 bits), Expect = 6.6e-08, Sum P(4) = 6.6e-08
Identities = 7/15 (46%), Positives = 8/15 (53%)
Query: 64 SSYCLCPLGFTGDLC 78
S +C C GF G C
Sbjct: 1067 SGHCPCKKGFGGQSC 1081
Score = 41 (19.5 bits), Expect = 6.6e-08, Sum P(4) = 6.6e-08
Identities = 8/17 (47%), Positives = 9/17 (52%)
Query: 62 PGSSYCLCPLGFTGDLC 78
PG C C G+ GD C
Sbjct: 431 PGQ--CPCRKGYAGDKC 445
Score = 39 (18.8 bits), Expect = 7.0e-07, Sum P(5) = 7.0e-07
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 305 ASFLHYLDPEIIHSSGLLHYK 325
AS L+ L+ ++I+ GL H K
Sbjct: 2431 ASDLNRLEKDLIYVGGLPHSK 2451
>MGI|MGI:1100883 [details] [associations]
symbol:Celsr1 "cadherin, EGF LAG seven-pass G-type receptor
1 (flamingo homolog, Drosophila)" species:10090 "Mus musculus"
[GO:0001702 "gastrulation with mouth forming second" evidence=NAS]
[GO:0001736 "establishment of planar polarity" evidence=IMP]
[GO:0001764 "neuron migration" evidence=IMP] [GO:0001843 "neural
tube closure" evidence=IGI;IMP] [GO:0001942 "hair follicle
development" evidence=IMP] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0004888 "transmembrane signaling receptor
activity" evidence=NAS] [GO:0004930 "G-protein coupled receptor
activity" evidence=NAS] [GO:0005509 "calcium ion binding"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005887 "integral
to plasma membrane" evidence=TAS] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0007156 "homophilic cell adhesion" evidence=IEA]
[GO:0007165 "signal transduction" evidence=NAS] [GO:0007166 "cell
surface receptor signaling pathway" evidence=IEA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=NAS]
[GO:0007218 "neuropeptide signaling pathway" evidence=IEA]
[GO:0007266 "Rho protein signal transduction" evidence=IMP]
[GO:0007267 "cell-cell signaling" evidence=NAS] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007417
"central nervous system development" evidence=NAS] [GO:0007626
"locomotory behavior" evidence=IMP] [GO:0009952 "anterior/posterior
pattern specification" evidence=IMP] [GO:0016020 "membrane"
evidence=IDA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0032956 "regulation of actin cytoskeleton organization"
evidence=IMP] [GO:0042060 "wound healing" evidence=IGI] [GO:0042249
"establishment of planar polarity of embryonic epithelium"
evidence=IMP] [GO:0042472 "inner ear morphogenesis" evidence=IMP]
[GO:0045176 "apical protein localization" evidence=IMP] [GO:0046928
"regulation of neurotransmitter secretion" evidence=NAS]
[GO:0046983 "protein dimerization activity" evidence=NAS]
[GO:0048105 "establishment of body hair planar orientation"
evidence=IMP] [GO:0060488 "orthogonal dichotomous subdivision of
terminal units involved in lung branching morphogenesis"
evidence=IMP] [GO:0060489 "planar dichotomous subdivision of
terminal units involved in lung branching morphogenesis"
evidence=IMP] [GO:0060490 "lateral sprouting involved in lung
morphogenesis" evidence=IMP] [GO:0090179 "planar cell polarity
pathway involved in neural tube closure" evidence=IGI] [GO:0090251
"protein localization involved in establishment of planar polarity"
evidence=IDA] InterPro:IPR000203 InterPro:IPR000742
InterPro:IPR000832 InterPro:IPR001879 InterPro:IPR002126
InterPro:IPR015919 InterPro:IPR017981 InterPro:IPR020894
Pfam:PF00002 Pfam:PF00008 Pfam:PF00028 Pfam:PF01825 Pfam:PF02793
PRINTS:PR00205 PRINTS:PR00249 PROSITE:PS00232 PROSITE:PS00649
PROSITE:PS00650 PROSITE:PS50026 PROSITE:PS50221 PROSITE:PS50227
PROSITE:PS50261 PROSITE:PS50268 SMART:SM00008 SMART:SM00112
SMART:SM00181 SMART:SM00303 InterPro:IPR000152 MGI:MGI:1100883
GO:GO:0001764 GO:GO:0005887 GO:GO:0009952 GO:GO:0004930
GO:GO:0046928 GO:GO:0007218 GO:GO:0005509 GO:GO:0007267
GO:GO:0007626 GO:GO:0007417 GO:GO:0046983 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0042472 GO:GO:0001942
GO:GO:0001702 PROSITE:PS01186 GO:GO:0007266 GO:GO:0001843
eggNOG:NOG12793 GO:GO:0042060 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 SMART:SM00180 SMART:SM00282 PROSITE:PS00010
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 GO:GO:0032956
GO:GO:0007156 SUPFAM:SSF49313 InterPro:IPR022624 Pfam:PF12003
Gene3D:2.60.40.60 GeneTree:ENSGT00700000104170 GO:GO:0045176
Pfam:PF02210 CTD:9620 HOGENOM:HOG000231346 HOVERGEN:HBG050887
KO:K04600 OMA:NKPNIGH OrthoDB:EOG4KKZ23 GO:GO:0048105 GO:GO:0042249
GO:GO:0060490 GO:GO:0060488 GO:GO:0090179 GO:GO:0060489
GO:GO:0090251 EMBL:AF031572 EMBL:AC116764 EMBL:AC139513
IPI:IPI00127701 PIR:T14119 RefSeq:NP_034016.2 UniGene:Mm.22680
STRING:O35161 PhosphoSite:O35161 PaxDb:O35161 PRIDE:O35161
Ensembl:ENSMUST00000016172 GeneID:12614 KEGG:mmu:12614
UCSC:uc007xdt.1 InParanoid:O35161 NextBio:281774 Bgee:O35161
Genevestigator:O35161 GermOnline:ENSMUSG00000016028 Uniprot:O35161
Length = 3034
Score = 185 (70.2 bits), Expect = 7.1e-09, Sum P(2) = 7.1e-09
Identities = 68/257 (26%), Positives = 111/257 (43%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQ-FNGSSYLRYQGLGEQYL 105
C+ T C++GG C+ + C CPL F G C+ + PQ F G S + + L
Sbjct: 1668 CDGTSCQNGGTCVNRWNTYLCECPLRFGGKNCEQAMPH--PQRFTGESVVLWSDLDITIS 1725
Query: 106 SLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLG-TGAATLR-SSN 163
L ++F+ + +G+L+ G + L + + Y+ F G + A+++ S +
Sbjct: 1726 VPWYLGLMFRTRKEDGVLM---EATAGTSSRLHLQILNSYIRFEVSYGPSDVASMQLSKS 1782
Query: 164 PISLGEWH----KLRLTRTGRHA-YLQV---DRFPSSQILSPGPFTQXXXXXXXXXGGVP 215
I+ G WH +LR + G+ YL V D + G GGV
Sbjct: 1783 RITDGGWHHLLIELRSAKEGKDIKYLAVMTLDYGMDQSTVQIGNQLPGLKMRTIVIGGVT 1842
Query: 216 DYNIVSPKVKIKSSFIGCIQKVLINNHELNI----LGEAIQGVNVVN-C--AHPCITQPC 268
+ KV ++ F GC+Q V + NI + +A++ V V + C PC + PC
Sbjct: 1843 E-----DKVSVRHGFRGCMQGVRMGETSTNIATLNMNDALK-VRVKDGCDVEDPCASSPC 1896
Query: 269 GSGS-CVPLYDGYKCVC 284
S C +D Y C+C
Sbjct: 1897 PPHSHCRDTWDSYSCIC 1913
Score = 149 (57.5 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 38/132 (28%), Positives = 65/132 (49%)
Query: 46 KCNKTPCEHGGKCITTP-GSSYCLCPLG-FTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQ 103
+C C++GG C+ G +C+CP G + C+ PQ S++ ++GL ++
Sbjct: 1421 RCASGVCKNGGTCVNLLIGGFHCVCPPGEYEHPYCEVSTRSFPPQ----SFVTFRGLRQR 1476
Query: 104 YLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSN 163
+ +++ F + N +LLYNG R + DFIAL + + + TF G T+
Sbjct: 1477 FH--FTVSLAFATQDRNALLLYNG-RFNEKHDFIALEIVEEQLQLTFSAGETTTTVTPQV 1533
Query: 164 P--ISLGEWHKL 173
P +S G WH +
Sbjct: 1534 PGGVSDGRWHSV 1545
Score = 51 (23.0 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 43/198 (21%), Positives = 70/198 (35%)
Query: 212 GGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNCAHPCITQPCGSG 271
GGVP N+ F+GC++ + I+ +++ CA C
Sbjct: 1616 GGVP--NLPEDFPVHSRQFVGCMRNLSIDGRIVDMAAFIANNGTRAGCASQ--RNFCDGT 1671
Query: 272 SCVPLYDGYKCVCTQSCKESHLTEVMCASFDHGASFLHYLDPEIIHSSGLLHYKFQLHVD 331
SC +G CV + ++L E C G P H L D
Sbjct: 1672 SC---QNGGTCVNRWN---TYLCE--CP-LRFGGKNCEQAMP---HPQRFTGESVVLWSD 1719
Query: 332 FRIT-GYEFNIDMRIKTSSSSGLILW-TGSSQSKDFLALGIHNGYAH--VMYXXXXXXXX 387
IT + + + +T G+++ T + S+ L L I N Y V Y
Sbjct: 1720 LDITISVPWYLGLMFRTRKEDGVLMEATAGTSSR--LHLQILNSYIRFEVSYGPSDVASM 1777
Query: 388 XXXXQTKINNGVWHRLTV 405
+++I +G WH L +
Sbjct: 1778 QLS-KSRITDGGWHHLLI 1794
Score = 41 (19.5 bits), Expect = 7.1e-09, Sum P(2) = 7.1e-09
Identities = 6/14 (42%), Positives = 10/14 (71%)
Query: 47 CNKTPCEHGGKCIT 60
C + PCE+ KC++
Sbjct: 1322 CLREPCENYMKCVS 1335
>UNIPROTKB|P24043 [details] [associations]
symbol:LAMA2 "Laminin subunit alpha-2" species:9606 "Homo
sapiens" [GO:0005102 "receptor binding" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0030155 "regulation of cell
adhesion" evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0007411
"axon guidance" evidence=IEA] [GO:0032224 "positive regulation of
synaptic transmission, cholinergic" evidence=IEA] [GO:0042383
"sarcolemma" evidence=IEA] [GO:0005604 "basement membrane"
evidence=IDA] [GO:0005198 "structural molecule activity"
evidence=TAS] [GO:0007517 "muscle organ development" evidence=TAS]
[GO:0005576 "extracellular region" evidence=TAS] [GO:0031012
"extracellular matrix" evidence=ISS] InterPro:IPR009254
InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway
Reactome:REACT_111102 GO:GO:0007411 GO:GO:0030155 GO:GO:0005198
GO:GO:0007155 GO:GO:0042383 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
GO:GO:0007517 PROSITE:PS01186 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 Pfam:PF00054 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pathway_Interaction_DB:amb2_neutrophils_pathway GO:GO:0005604
Pfam:PF02210 GO:GO:0045995 GO:GO:0032224 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
HOGENOM:HOG000293201 HOVERGEN:HBG052298 KO:K05637 GO:GO:0005606
EMBL:Z26653 EMBL:U66796 EMBL:U66733 EMBL:U66734 EMBL:U66735
EMBL:U66736 EMBL:U66737 EMBL:U66738 EMBL:U66739 EMBL:U66740
EMBL:U66741 EMBL:U66742 EMBL:U66743 EMBL:U66745 EMBL:U66746
EMBL:U66747 EMBL:U66748 EMBL:U66749 EMBL:U66750 EMBL:U66751
EMBL:U66752 EMBL:U66753 EMBL:U66754 EMBL:U66755 EMBL:U66756
EMBL:U66757 EMBL:U66758 EMBL:U66759 EMBL:U66760 EMBL:U66761
EMBL:U66762 EMBL:U66763 EMBL:U66764 EMBL:U66765 EMBL:U66766
EMBL:U66768 EMBL:U66769 EMBL:U66770 EMBL:U66771 EMBL:U66772
EMBL:U66773 EMBL:U66774 EMBL:U66775 EMBL:U66776 EMBL:U66777
EMBL:U66778 EMBL:U66779 EMBL:U66780 EMBL:U66781 EMBL:U66782
EMBL:U66783 EMBL:U66784 EMBL:U66785 EMBL:U66786 EMBL:U66787
EMBL:U66788 EMBL:U66789 EMBL:U66790 EMBL:U66791 EMBL:U66792
EMBL:U66793 EMBL:U66794 EMBL:U66795 EMBL:AL583853 EMBL:AL356124
EMBL:AL445439 EMBL:AL513527 EMBL:AL590613 EMBL:AL669984
EMBL:AL589927 EMBL:M59832 IPI:IPI00873889 PIR:PX0082
RefSeq:NP_000417.2 RefSeq:NP_001073291.1 UniGene:Hs.200841
ProteinModelPortal:P24043 SMR:P24043 DIP:DIP-42562N IntAct:P24043
MINT:MINT-2635209 STRING:P24043 PhosphoSite:P24043 DMDM:215274259
PaxDb:P24043 PRIDE:P24043 DNASU:3908 Ensembl:ENST00000421865
GeneID:3908 KEGG:hsa:3908 UCSC:uc003qbn.3 CTD:3908
GeneCards:GC06P129246 HGNC:HGNC:6482 HPA:CAB040310 MIM:156225
MIM:607855 neXtProt:NX_P24043 Orphanet:258 PharmGKB:PA30271
eggNOG:COG0419 OMA:NCNSFGS OrthoDB:EOG4RFKRM PhylomeDB:P24043
GenomeRNAi:3908 NextBio:15339 ArrayExpress:P24043 Bgee:P24043
CleanEx:HS_LAMA2 Genevestigator:P24043 GermOnline:ENSG00000196569
Uniprot:P24043
Length = 3122
Score = 119 (46.9 bits), Expect = 8.0e-09, Sum P(3) = 8.0e-09
Identities = 41/171 (23%), Positives = 78/171 (45%)
Query: 88 QFNGSSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVD 147
QF+G Y Y ++ + F+ + +L+Y R + DF+++ L D ++
Sbjct: 2342 QFDGEGYALVSRPIRWYPNISTVMFKFRTFSSSALLMYLATR--DLRDFMSVELTDGHIK 2399
Query: 148 FTFDLGTGAATLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQ-----ILSPGP-F- 200
++DLG+G A++ S+ + G+W L+R + A + + ++Q S G F
Sbjct: 2400 VSYDLGSGMASVVSNQNHNDGKWKSFTLSRIQKQANISIVDIDTNQEENIATSSSGNNFG 2459
Query: 201 TQXXXXXXXXXGGVPDYNIVS----PKVKIKSSFIGCIQKVLINNHELNIL 247
GG+P +S P+V +K + GC++ + I+ NIL
Sbjct: 2460 LDLKADDKIYFGGLPTLRNLSMKARPEVNLKK-YSGCLKDIEISRTPYNIL 2509
Score = 99 (39.9 bits), Expect = 8.0e-09, Sum P(3) = 8.0e-09
Identities = 24/91 (26%), Positives = 42/91 (46%)
Query: 341 IDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGVW 400
I++ ++T + SGL+ + DF + + NG + Y TKIN+G W
Sbjct: 2789 IELEVRTEAESGLLFYMARINHADFATVQLRNGLPYFSYDLGSGDTHTMI-PTKINDGQW 2847
Query: 401 HRLTVHRN----FMVVMHGSSHTRSNKSSKI 427
H++ + R+ + V S+ T S K + I
Sbjct: 2848 HKIKIMRSKQEGILYVDGASNRTISPKKADI 2878
Score = 77 (32.2 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 32/150 (21%), Positives = 65/150 (43%)
Query: 109 DLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSN-PISL 167
++ + K + +L Y G A + DF+A+ + V F +D+G+G + + I
Sbjct: 2169 NIVVNVKTAVADNLLFYLGS-AKFI-DFLAIEMRKGKVSFLWDVGSGVGRVEYPDLTIDD 2226
Query: 168 GEWHKLRLTRTGRHAYLQVDRF--PSSQIL-------SPGPFT--QXXXXXXXXXGGVPD 216
W+++ +RTGR+ + V P + I+ SP +T GG+
Sbjct: 2227 SYWYRIVASRTGRNGTISVRALDGPKASIVPSTHHSTSPPGYTILDVDANAMLFVGGLTG 2286
Query: 217 YNIVSPKVKIKSSFIGCIQKVLINNHELNI 246
+ V++ +F GC+ + +N + +
Sbjct: 2287 KLKKADAVRV-ITFTGCMGETYFDNKPIGL 2315
Score = 59 (25.8 bits), Expect = 8.0e-09, Sum P(3) = 8.0e-09
Identities = 12/36 (33%), Positives = 15/36 (41%)
Query: 44 EDKCNKTPCEH-GGKCITTPGSSYCLCPLGFTGDLC 78
E C C H G C P + C+CP G+ C
Sbjct: 1008 EGGCTACECSHLGNNC--DPKTGRCICPPNTIGEKC 1041
Score = 52 (23.4 bits), Expect = 4.0e-08, Sum P(3) = 4.0e-08
Identities = 13/33 (39%), Positives = 17/33 (51%)
Query: 53 EHG-GKCITTPGS--SYCLCPLGFTGDLCQTRL 82
E G G +T P C CPLG++G C+ L
Sbjct: 1363 EQGRGTTMTPPADLIEKCDCPLGYSGLSCEACL 1395
Score = 50 (22.7 bits), Expect = 6.4e-08, Sum P(3) = 6.4e-08
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 67 CLCPLGFTGDLCQT 80
C CP G+TG C++
Sbjct: 724 CQCPPGYTGSSCES 737
Score = 48 (22.0 bits), Expect = 1.0e-07, Sum P(3) = 1.0e-07
Identities = 12/40 (30%), Positives = 15/40 (37%)
Query: 39 SKECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLC 78
++ C+ CN G K S C C G TG C
Sbjct: 961 ARGCVPCNCNS----FGSKSFDCEESGQCWCQPGVTGKKC 996
Score = 48 (22.0 bits), Expect = 1.0e-07, Sum P(3) = 1.0e-07
Identities = 12/49 (24%), Positives = 19/49 (38%)
Query: 35 IKGRSKECLEDKCNKTPCEHG--GKCITTPGSSY-CL-CPLGFTGDLCQ 79
+KG +C + C + C+ Y C CP G+ G C+
Sbjct: 1459 VKGLPNDCQQCACPLISSSNNFSPSCVAEGLDDYRCTACPRGYEGQYCE 1507
Score = 48 (22.0 bits), Expect = 1.0e-07, Sum P(3) = 1.0e-07
Identities = 15/52 (28%), Positives = 22/52 (42%)
Query: 32 GNKIKGRSKECLEDKCN-KTPCEH-GGKC-ITTPGSSYCL-CPLGFTGDLCQ 79
G KG S++C C P + C + C CP+G+TG C+
Sbjct: 794 GEPTKGTSEDCQPCACPLNIPSNNFSPTCHLDRSLGLICDGCPVGYTGPRCE 845
Score = 45 (20.9 bits), Expect = 2.0e-07, Sum P(3) = 2.0e-07
Identities = 10/34 (29%), Positives = 16/34 (47%)
Query: 47 CNKTPCE-HGGKCITT-PGSSYCLCPLGFTGDLC 78
C + C+ +G + P + +C C G TG C
Sbjct: 1524 CQECECDPYGSLPVPCDPVTGFCTCRPGATGRKC 1557
>UNIPROTKB|Q14517 [details] [associations]
symbol:FAT1 "Protocadherin Fat 1" species:9606 "Homo
sapiens" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0007156 "homophilic cell adhesion" evidence=IEA] [GO:0030027
"lamellipodium" evidence=IEA] [GO:0030175 "filopodium"
evidence=IEA] [GO:0005911 "cell-cell junction" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0007015 "actin filament organization"
evidence=ISS] [GO:0016337 "cell-cell adhesion" evidence=ISS]
[GO:0007163 "establishment or maintenance of cell polarity"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016477 "cell migration" evidence=ISS] [GO:0005887 "integral to
plasma membrane" evidence=TAS] [GO:0007155 "cell adhesion"
evidence=TAS] [GO:0007267 "cell-cell signaling" evidence=TAS]
[GO:0009653 "anatomical structure morphogenesis" evidence=TAS]
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR002126
InterPro:IPR015919 InterPro:IPR018097 InterPro:IPR020894
Pfam:PF00008 Pfam:PF00028 Pfam:PF07645 PRINTS:PR00205
PROSITE:PS00232 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS50268
SMART:SM00112 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005634 GO:GO:0048471 GO:GO:0005887 GO:GO:0016477
GO:GO:0007015 GO:GO:0007163 GO:GO:0005509 GO:GO:0007267
GO:GO:0005911 GO:GO:0030027 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030175 GO:GO:0016337 PROSITE:PS01186
eggNOG:NOG12793 InterPro:IPR001791 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 GO:GO:0009653 GO:GO:0007156 SUPFAM:SSF49313
Gene3D:2.60.40.60 Pfam:PF02210 KO:K16506 EMBL:X87241 EMBL:AC107050
EMBL:AC110761 IPI:IPI00940698 RefSeq:NP_005236.2 UniGene:Hs.481371
ProteinModelPortal:Q14517 IntAct:Q14517 MINT:MINT-2806731
STRING:Q14517 PhosphoSite:Q14517 DMDM:8928104 PaxDb:Q14517
PRIDE:Q14517 Ensembl:ENST00000441802 GeneID:2195 KEGG:hsa:2195
UCSC:uc003izf.3 CTD:2195 GeneCards:GC04M187508 HGNC:HGNC:3595
HPA:HPA001869 HPA:HPA023882 MIM:600976 neXtProt:NX_Q14517
PharmGKB:PA164719952 HOGENOM:HOG000046499 HOVERGEN:HBG005641
InParanoid:Q14517 ChiTaRS:FAT1 GenomeRNAi:2195 NextBio:8873
ArrayExpress:Q14517 Bgee:Q14517 CleanEx:HS_FAT1
Genevestigator:Q14517 GermOnline:ENSG00000083857 Uniprot:Q14517
Length = 4588
Score = 180 (68.4 bits), Expect = 8.7e-09, Sum P(2) = 8.7e-09
Identities = 61/258 (23%), Positives = 110/258 (42%)
Query: 47 CNKTPCEHGGKCITTPGSSY--CLCPLGFTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQY 104
C PC G +C++ P C+CP G G C + + G+SY++Y+ L E
Sbjct: 3794 CEDDPCPEGSECVSDPWEEKHTCVCPSGRFGQ-CPGSSSMTL---TGNSYVKYR-LTENE 3848
Query: 105 LSL-LDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLR-SS 162
L + LT+ + + +++Y A G D+ L ++ + + FD G+G + S
Sbjct: 3849 NKLEMKLTMRLRTYSTHAVVMY----ARGT-DYSILEIHHGRLQYKFDCGSGPGIVSVQS 3903
Query: 163 NPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGG-VPDYNIVS 221
++ G+WH + L G +A L +D+ ++ +PG GG +
Sbjct: 3904 IQVNDGQWHAVALEVNGNYARLVLDQVHTASGTAPGTLKTLNLDNYVFFGGHIRQQGTRH 3963
Query: 222 PKV-KIKSSFIGCIQKVLINNHELNI------LGEAIQGVNV-----VNCAHPCITQPCG 269
+ ++ + F GC+ + +N EL + + V+V + C + PC
Sbjct: 3964 GRSPQVGNGFRGCMDSIYLNGQELPLNSKPRSYAHIEESVDVSPGCFLTATEDCASNPCQ 4023
Query: 270 SGS-CVPL-YDGYKCVCT 285
+G C P GY C C+
Sbjct: 4024 NGGVCNPSPAGGYYCKCS 4041
Score = 49 (22.3 bits), Expect = 8.7e-09, Sum P(2) = 8.7e-09
Identities = 9/23 (39%), Positives = 11/23 (47%)
Query: 263 CITQPC-GSGSCVPLYDGYKCVC 284
C +PC G+C DG C C
Sbjct: 4093 CKDEPCKNGGTCFDSLDGAVCQC 4115
Score = 47 (21.6 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 261 HPCITQPC-GSGSCVP-----------LYDGYKCVCTQSCKE 290
+PC ++PC G+CV LY G +C + CK+
Sbjct: 4054 NPCSSKPCLYGGTCVVDNGGFVCQCRGLYTGQRCQLSPYCKD 4095
>RGD|1592077 [details] [associations]
symbol:LOC304725 "similar to contactin associated protein-like 5
isoform 1" species:10116 "Rattus norvegicus" [GO:0007155 "cell
adhesion" evidence=IEA] InterPro:IPR000421 InterPro:IPR000742
Pfam:PF00754 PROSITE:PS01286 PROSITE:PS50022 PROSITE:PS50026
SMART:SM00181 RGD:1592077 INTERPRO:IPR002181 GO:GO:0007165
GO:GO:0007155 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 InterPro:IPR008979
SUPFAM:SSF49785 InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025
SUPFAM:SSF56496 PROSITE:PS51406 Pfam:PF02210 IPI:IPI00952005
Ensembl:ENSRNOT00000041670 ArrayExpress:F1LVW1 Uniprot:F1LVW1
Length = 1111
Score = 128 (50.1 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 57/209 (27%), Positives = 92/209 (44%)
Query: 78 CQTRLDLQVPQFNGSSYLRYQGLGEQYLSLLD-LTIVFKAIEPNGILLYN-GHRADGVGD 135
C + D V F+G S L Y+ + +L D +++ FK+++ +G+L + G R GD
Sbjct: 50 CSYKSD--VADFDGQSSLLYRFSQKTMSTLKDVISLKFKSMQGDGVLFHGEGQR----GD 103
Query: 136 FIALYL-NDRYVDFTFDLGTGAATLRSSNPIS-LGE------WHKLRLTRTGRHAYLQVD 187
I L L N R V + +L A L S P + LG WH + L R G+ VD
Sbjct: 104 HITLELQNGRLVLY-LNLDDKKAWLSSITPSAILGSLLDDQHWHSVFLERVGKQVNFTVD 162
Query: 188 RFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNIL 247
R + + G GG+P + P +K +F GCI+ + N +NI+
Sbjct: 163 R-NTQHFWTKGETEVLDIDYELSFGGIPVPS--KPGTFVKKNFHGCIENLYYNG--VNII 217
Query: 248 GEAIQGVNVVNCAHPCITQPCGSGSCVPL 276
A + + + + +T C VP+
Sbjct: 218 DLAKRRKHQIYSGN--VTFSCSEPQIVPI 244
Score = 126 (49.4 bits), Expect = 9.6e-09, Sum P(2) = 9.6e-09
Identities = 64/276 (23%), Positives = 112/276 (40%)
Query: 146 VDFTFDLGTGAATL--RSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSS--QILSPGPFT 201
V F D+G L +S P++ +WH ++ R + LQVD P + ++ F
Sbjct: 654 VIFAIDVGNSPIELLVQSPYPLNDNQWHYIQAERNIKETLLQVDNLPKNKREVSDQSNFL 713
Query: 202 QXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEA--IQGVNVVNC 259
GG S + K F+GCI+ + +N ++++ A GV C
Sbjct: 714 -LQLSSQLFIGGT------SSRQK---GFLGCIRSLHLNGQKIDLEERAKITPGVRP-GC 762
Query: 260 AHPCIT--QPC-GSGSCVPLYDGYKCVCTQSCKESHLTEV-MCASFDHGASFLH-YLDPE 314
C + + C G CV ++GY C CT S E + M A F G S + + +P
Sbjct: 763 PGHCSSYGRNCHNGGKCVEKHNGYSCDCTNSPFEGPFCQKEMSALFYSGTSVTYMFQEPY 822
Query: 315 IIHSSGLLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGI-HNG 373
+ + L ++ D E + + T+ + L+L+ S + FLA+ + NG
Sbjct: 823 PVAKNTSLSSS-AIYKD-TAPSKEI-VTLSFITAQAPALLLYLKFSP-QSFLAILLSRNG 878
Query: 374 YAHVMYXXXXXXXXXXXXQTK-INNGVWHRLTVHRN 408
+ Y ++ + N H + ++RN
Sbjct: 879 NLQIHYQLSKVESHVFTVGSENLANRRVHEVNMNRN 914
Score = 92 (37.4 bits), Expect = 9.6e-09, Sum P(2) = 9.6e-09
Identities = 17/41 (41%), Positives = 22/41 (53%)
Query: 43 LEDKCNKTPCEHGGKCITTPGSSYCLCP-LGFTGDLCQTRL 82
++D+C CEHGG C T S YC C G+TG C +
Sbjct: 422 IKDRCLPNYCEHGGHCTQTWTSFYCNCSDTGYTGATCHNSI 462
Score = 63 (27.2 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 13/67 (19%), Positives = 30/67 (44%)
Query: 340 NIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGV 399
++ + +T + GL+L T S+ L L + +G ++ +N+G
Sbjct: 266 SVSFQFRTWNEDGLLLSTELSEGSGTLLLILESGTLRLLIKKVTGHGTESLTGRSLNDGR 325
Query: 400 WHRLTVH 406
WH ++++
Sbjct: 326 WHSVSIN 332
>ZFIN|ZDB-GENE-050823-4 [details] [associations]
symbol:celsr1b "cadherin EGF LAG seven-pass G-type
receptor 1b" species:7955 "Danio rerio" [GO:0004888 "transmembrane
signaling receptor activity" evidence=IEA] [GO:0005509 "calcium ion
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007166 "cell surface receptor signaling pathway" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0004930 "G-protein coupled
receptor activity" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0007156 "homophilic cell adhesion"
evidence=IEA] [GO:0007218 "neuropeptide signaling pathway"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0007165
"signal transduction" evidence=IEA] [GO:0042074 "cell migration
involved in gastrulation" evidence=IGI;IMP] InterPro:IPR000203
InterPro:IPR000742 InterPro:IPR000832 InterPro:IPR001879
InterPro:IPR001881 InterPro:IPR002126 InterPro:IPR015919
InterPro:IPR017981 InterPro:IPR020894 Pfam:PF00002 Pfam:PF00008
Pfam:PF00028 Pfam:PF01825 PRINTS:PR00205 PRINTS:PR00249
PROSITE:PS00232 PROSITE:PS50026 PROSITE:PS50221 PROSITE:PS50227
PROSITE:PS50261 PROSITE:PS50268 SMART:SM00112 SMART:SM00179
SMART:SM00181 SMART:SM00303 ZFIN:ZDB-GENE-050823-4 GO:GO:0016021
GO:GO:0005886 GO:GO:0004930 GO:GO:0007218 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 GO:GO:0007156 GO:GO:0042074 SUPFAM:SSF49313
InterPro:IPR022624 Pfam:PF12003 Gene3D:2.60.40.60
GeneTree:ENSGT00700000104170 Pfam:PF02210 KO:K04600 EMBL:CU929369
EMBL:CU041386 IPI:IPI00614991 RefSeq:XP_001920772.2
UniGene:Dr.134446 Ensembl:ENSDART00000128852 GeneID:556520
KEGG:dre:556520 CTD:556520 NextBio:20881525 Bgee:F1QBS8
Uniprot:F1QBS8
Length = 3006
Score = 159 (61.0 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 40/134 (29%), Positives = 66/134 (49%)
Query: 46 KCNKTPCEHGGKCITT-PGSSYCLCPLG-FTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQ 103
+C C++GG+C+ G C CP G + CQ + F G S++ ++GL ++
Sbjct: 1384 RCVPGVCKNGGRCLDLLVGGFMCQCPDGEYEKPYCQ----MSTRSFPGQSFITFRGLRQR 1439
Query: 104 YLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRS-- 161
+ L+ +F E N +LLYNG R + DFIA+ + + TF G T+
Sbjct: 1440 FH--FTLSFMFATRERNALLLYNG-RFNEKHDFIAIEIVKEQIQLTFSAGESKTTVTPFV 1496
Query: 162 SNPISLGEWHKLRL 175
+ +S G+WH + L
Sbjct: 1497 AGGVSDGQWHTIHL 1510
Score = 138 (53.6 bits), Expect = 0.00090, Sum P(2) = 0.00090
Identities = 58/257 (22%), Positives = 110/257 (42%)
Query: 45 DKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQY 104
D C++ C++GG C+ + C CPLG+ G C+ + + F+G + + +
Sbjct: 1629 DFCSQAVCQNGGVCVNRWNTHTCNCPLGYGGKNCEHVMPAPL-HFDGHALVSWSDTDITI 1687
Query: 105 LSLLDLTIVFKAIEPNGILLYNGHRADGVGDF--IALYLNDRYVDFTFDLGTGAATLRSS 162
+ ++F+ + G++L +A G+F I L + +R++ F LG L
Sbjct: 1688 AIPWYMGLMFRTRKSTGVIL----QATA-GEFSKINLMVTNRHLRFQVFLGNRRVALLDF 1742
Query: 163 NPISL--GEWHKLRLT-RTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNI 219
+ + GEWH + + ++G+ + ++ + L G F Q G+ N+
Sbjct: 1743 PQVYVDNGEWHHVLVELKSGKDG--KDIKYMALVSLDYGMF-QRTVEIGNELPGLKLRNL 1799
Query: 220 -VSPKVK----IKSSFIGCIQKVLINNHELNILGEAIQGVNVVN----CAHP--CITQPC 268
+ +K ++ F GC+Q V + NI I+ ++ C P C+ C
Sbjct: 1800 FIGGLLKKDDTVQGGFNGCMQGVRMGETSTNIANINIRHAKRIHAKDGCNVPDACLANLC 1859
Query: 269 GSGS-CVPLYDGYKCVC 284
S S C + + CVC
Sbjct: 1860 PSHSHCTDNWTSHTCVC 1876
Score = 66 (28.3 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 42/196 (21%), Positives = 75/196 (38%)
Query: 212 GGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNCAHPCITQPCGSG 271
GGVP+ P V+ + F+GCI+ + I++ +++ CA C
Sbjct: 1579 GGVPNLPEDFP-VQNRD-FVGCIKNLTIDSKPIDMANFISDNGTAAGCAAK--RDFCSQA 1634
Query: 272 SCVPLYDGYKCVCTQSCKESHLTEVMCASFDHGASFLHYLDPEIIHSSGLLHYKFQLHVD 331
C +G CV + +H C +G ++ P +H G + D
Sbjct: 1635 VC---QNGGVCVNRWN---THTCN--CP-LGYGGKNCEHVMPAPLHFDGHALVSWS-DTD 1684
Query: 332 FRITGYEFNIDMRIKTSSSSGLILW-TGSSQSKDFLALGIHNGYAHV-MYXXXXXXXXXX 389
I + + + +T S+G+IL T SK + L + N + ++
Sbjct: 1685 ITIA-IPWYMGLMFRTRKSTGVILQATAGEFSK--INLMVTNRHLRFQVFLGNRRVALLD 1741
Query: 390 XXQTKINNGVWHRLTV 405
Q ++NG WH + V
Sbjct: 1742 FPQVYVDNGEWHHVLV 1757
Score = 51 (23.0 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 12/31 (38%), Positives = 15/31 (48%)
Query: 258 NCAHPCITQPCG-SGSCV--PLYD-GYKCVC 284
+C C+ PC + SCV P GY C C
Sbjct: 1884 DCVDACLLNPCEHTSSCVRKPSTKRGYSCDC 1914
Score = 40 (19.1 bits), Expect = 0.00090, Sum P(2) = 0.00090
Identities = 6/13 (46%), Positives = 9/13 (69%)
Query: 47 CNKTPCEHGGKCI 59
C + PCE+ KC+
Sbjct: 1285 CLREPCENYMKCV 1297
>MGI|MGI:1315202 [details] [associations]
symbol:Slit3 "slit homolog 3 (Drosophila)" species:10090
"Mus musculus" [GO:0005102 "receptor binding" evidence=TAS]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005615 "extracellular
space" evidence=ISO;IDA] [GO:0005739 "mitochondrion" evidence=ISO]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007399 "nervous system development" evidence=IEA] [GO:0007411
"axon guidance" evidence=ISO;IDA] [GO:0008285 "negative regulation
of cell proliferation" evidence=IGI] [GO:0009887 "organ
morphogenesis" evidence=IGI;IMP] [GO:0010629 "negative regulation
of gene expression" evidence=IGI] [GO:0016020 "membrane"
evidence=ISO] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=ISO]
[GO:0035385 "Roundabout signaling pathway" evidence=ISO]
[GO:0048495 "Roundabout binding" evidence=ISO] [GO:0048846 "axon
extension involved in axon guidance" evidence=ISO] [GO:0050919
"negative chemotaxis" evidence=ISO] [GO:0070100 "negative
regulation of chemokine-mediated signaling pathway" evidence=ISO]
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
MGI:MGI:1315202 GO:GO:0005739 GO:GO:0007411 GO:GO:0008285
GO:GO:0005615 GO:GO:0007420 GO:GO:0030308 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005102 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0009887 PROSITE:PS01186 GO:GO:0032870
GO:GO:0010629 InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025
GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 GO:GO:0048846 GO:GO:0070100 Pfam:PF12661 Pfam:PF01463
GO:GO:0051414 GeneTree:ENSGT00700000104083 GO:GO:0050919
GO:GO:0035385 GO:GO:0061364 HOGENOM:HOG000116120 HOVERGEN:HBG057959
OrthoDB:EOG4D7Z4T CTD:6586 KO:K06850 ChiTaRS:SLIT3 EMBL:AF144629
EMBL:AL669839 EMBL:AL669856 EMBL:AL731688 EMBL:AL732401
EMBL:AL732630 IPI:IPI00664551 RefSeq:NP_035542.2 UniGene:Mm.478604
ProteinModelPortal:Q9WVB4 SMR:Q9WVB4 STRING:Q9WVB4
PhosphoSite:Q9WVB4 PRIDE:Q9WVB4 Ensembl:ENSMUST00000069837
GeneID:20564 KEGG:mmu:20564 InParanoid:B1ATW4 OMA:SVDCHGL
NextBio:298861 Bgee:Q9WVB4 CleanEx:MM_SLIT3 Genevestigator:Q9WVB4
GermOnline:ENSMUSG00000056427 Uniprot:Q9WVB4
Length = 1523
Score = 150 (57.9 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 60/245 (24%), Positives = 94/245 (38%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQFNGS-SYLRYQGLGEQYL 105
C++ C++G +CI C CP GF G C+ + + F G SY+ +
Sbjct: 1123 CDQYECQNGAQCIVVQQEPTCRCPPGFAGPRCEKLITVN---FVGKDSYVELASAKVRPQ 1179
Query: 106 SLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFD-LGTGAATLRSSNP 164
+ + L + + NGILLY G D +AL L +V +D L + T+ S
Sbjct: 1180 ANISLQVATD--KDNGILLYKGDN-----DPLALELYQGHVRLVYDSLSSPPTTVYSVET 1232
Query: 165 ISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSP-- 222
++ G++H + L + L VD+ + GG+P +S
Sbjct: 1233 VNDGQFHSVELVMLNQTLNLVVDKGAPKSLGKLQKQPAVGSNSPLYLGGIPTSTGLSALR 1292
Query: 223 --KVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNCAHPCITQPCGSGSCVPLY-DG 279
+ F GCI +V INN + Q + V C C G C + D
Sbjct: 1293 QGADRPLGGFHGCIHEVRINNELQDFKALPPQSLGVSPGCKSCTV--CRHGLCRSVEKDS 1350
Query: 280 YKCVC 284
C C
Sbjct: 1351 VVCEC 1355
Score = 107 (42.7 bits), Expect = 3.3e-06, Sum P(3) = 3.3e-06
Identities = 19/55 (34%), Positives = 28/55 (50%)
Query: 36 KGRSKECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQFN 90
+G+ E D C CE+ C+ + CLCP +TG+LC +D VP+ N
Sbjct: 989 EGQRCEINPDDCEDNDCENSATCVDGINNYACLCPPNYTGELCDEVIDYCVPEMN 1043
Score = 95 (38.5 bits), Expect = 5.9e-05, Sum P(3) = 5.9e-05
Identities = 21/52 (40%), Positives = 27/52 (51%)
Query: 38 RSKECLE--DKCNKTPCEHGGKCITTP----GSSYCLCPLGFTGDLCQTRLD 83
+ K+C + C + PCEHGG C + G S C CPLGF G C+ D
Sbjct: 948 KGKDCTVPINTCVQNPCEHGGTCHLSENLRDGFS-CSCPLGFEGQRCEINPD 998
Score = 74 (31.1 bits), Expect = 3.3e-06, Sum P(3) = 3.3e-06
Identities = 15/62 (24%), Positives = 31/62 (50%)
Query: 340 NIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGV 399
NI +++ T +G++L+ G + D LAL ++ G+ ++Y +N+G
Sbjct: 1181 NISLQVATDKDNGILLYKGDN---DPLALELYQGHVRLVYDSLSSPPTTVYSVETVNDGQ 1237
Query: 400 WH 401
+H
Sbjct: 1238 FH 1239
Score = 68 (29.0 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 14/50 (28%), Positives = 23/50 (46%)
Query: 262 PCITQPCGSGSCVPLYDGYKCVCTQS-----CKESHLTEVMCASFD--HG 304
PC+ C G+C+ D Y C C + C + + + C++F HG
Sbjct: 1371 PCLGHSCRHGTCMATGDSYVCKCAEGYGGALCDQKNDSASACSAFKCHHG 1420
Score = 61 (26.5 bits), Expect = 3.3e-06, Sum P(3) = 3.3e-06
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 263 CITQPCGSGS-CVPLYDGYKCVCTQ 286
C+ C G+ CV +GY C+C Q
Sbjct: 1078 CVAHKCRHGAQCVDEVNGYTCICPQ 1102
Score = 39 (18.8 bits), Expect = 0.00049, Sum P(3) = 0.00049
Identities = 11/27 (40%), Positives = 12/27 (44%)
Query: 259 CAHP--CITQPCGSG-SCVPLYDGYKC 282
C H CI+ G CVP Y G C
Sbjct: 1045 CQHEAKCISLDKGFRCECVPGYSGKLC 1071
Score = 38 (18.4 bits), Expect = 0.00061, Sum P(3) = 0.00061
Identities = 5/12 (41%), Positives = 8/12 (66%)
Query: 273 CVPLYDGYKCVC 284
C+ L G++C C
Sbjct: 1051 CISLDKGFRCEC 1062
>FB|FBgn0262870 [details] [associations]
symbol:axo "axotactin" species:7227 "Drosophila melanogaster"
[GO:0008038 "neuron recognition" evidence=ISS] [GO:0019226
"transmission of nerve impulse" evidence=IMP] [GO:0005576
"extracellular region" evidence=ISS] [GO:0004867 "serine-type
endopeptidase inhibitor activity" evidence=IEA] InterPro:IPR000742
InterPro:IPR002223 Pfam:PF00014 PROSITE:PS50026 PROSITE:PS50279
SMART:SM00131 SMART:SM00181 INTERPRO:IPR002181 GO:GO:0007165
GO:GO:0005576 GO:GO:0004867 Gene3D:4.10.410.10 SUPFAM:SSF57362
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0019226 InterPro:IPR001791 SMART:SM00282
PROSITE:PS50025 SUPFAM:SSF56496 Pfam:PF02210 HSSP:P12111
FlyBase:FBgn0262870 EMBL:AF129420 ProteinModelPortal:Q9XYX0
STRING:Q9XYX0 PRIDE:Q9XYX0 InParanoid:Q9XYX0 ArrayExpress:Q9XYX0
Bgee:Q9XYX0 Uniprot:Q9XYX0
Length = 1685
Score = 156 (60.0 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 43/185 (23%), Positives = 79/185 (42%)
Query: 109 DLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAA---TLRSSNPI 165
D+ F+ ILL+ F+ D + FTF L TG + S +
Sbjct: 1103 DIAFSFRTTGEKAILLFQPPIRPHYPSFMVALTGDDQLTFTFTLSTGTTRELVINSHRRL 1162
Query: 166 SLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSPKVK 225
+ GEWHK+ + H ++ Q+L P + G ++++ K+
Sbjct: 1163 NGGEWHKIWIDYNQYHVRFMINT--DYQMLDLLPEEEFGPFEGSMYIGGATFDLLK-KLS 1219
Query: 226 IKSSFIGCIQKVLINNHELNILGE-AIQGVNVV-NCAHPCITQPCGSGS-CVPLYDGYKC 282
+K+ IGC + +++N L+I ++ ++ +C C+ PC +G+ C + +KC
Sbjct: 1220 VKAGLIGCFRGLVVNGEILDIYSYMSVHLSEIIKDCKPSCVPSPCRNGAQCKEFWSSFKC 1279
Query: 283 VCTQS 287
V QS
Sbjct: 1280 VLQQS 1284
Score = 62 (26.9 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 12/28 (42%), Positives = 13/28 (46%)
Query: 52 CEHGGKCITTPGSSYCLCP-LGFTGDLC 78
CEHGGKC C C G+ G C
Sbjct: 848 CEHGGKCFVKDDRVTCDCKHTGYIGKNC 875
>ZFIN|ZDB-GENE-010306-4 [details] [associations]
symbol:slit3 "slit (Drosophila) homolog 3"
species:7955 "Danio rerio" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0005576 "extracellular region" evidence=IEA]
[GO:0030517 "negative regulation of axon extension"
evidence=IGI;IMP] InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 ZFIN:ZDB-GENE-010306-4 GO:GO:0005576
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 GO:GO:0030517 InterPro:IPR006207
PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041 Pfam:PF02210
Pfam:PF12661 InterPro:IPR026906 Pfam:PF13306 Pfam:PF01463
GeneTree:ENSGT00700000104083 EMBL:AL928691 EMBL:BX323583
IPI:IPI00502606 Ensembl:ENSDART00000146299 ArrayExpress:F1RCV3
Bgee:F1RCV3 Uniprot:F1RCV3
Length = 1516
Score = 160 (61.4 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 66/245 (26%), Positives = 102/245 (41%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQFNGS-SYLRYQGLGEQYL 105
C+++ C++G +C+ G C C G+ G CQ + L F G +Y+ G +
Sbjct: 1117 CDQSDCQNGSECLVMEGEPVCRCLPGYFGTKCQKMVTLH---FLGKEAYVELSGT--RIR 1171
Query: 106 SLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGT-GAATLRSSNP 164
+ ++ + NGILLY + D D +AL L ++ +D+ T+ S
Sbjct: 1172 PPMHISFQVATDKDNGILLY---KEDH--DPLALELYQGHIRLIYDISKYPPTTVYSVES 1226
Query: 165 ISLGEWHKLRLTRTGRHAYLQVDR-FPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSP- 222
++ G +H + + + L VD+ P S P P GGVP S
Sbjct: 1227 VNDGLFHTVEVLIQNQTLSLVVDKGTPKSLGKLPRP-PAVDHNTQLYIGGVPSLIGTSGL 1285
Query: 223 KVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVV--NCAHPCITQPCGSGSCVPLYD-G 279
+ SF GC+ V +N EL LG + G+ V C H C C G+C D G
Sbjct: 1286 RPGPFQSFNGCLHDVRLNG-ELQDLGAGLAGIEGVLFGC-HSCSV--CDQGACRQRGDEG 1341
Query: 280 YKCVC 284
C C
Sbjct: 1342 VTCDC 1346
Score = 107 (42.7 bits), Expect = 2.5e-05, Sum P(3) = 2.5e-05
Identities = 21/61 (34%), Positives = 33/61 (54%)
Query: 47 CNKTPCEHGGKCIT-TPGSSYCLCPLGFTGDLCQTRLD--LQVPQFNGSSYLRYQGLGEQ 103
C TPC++ G C++ GS +C CP G+ G C+ ++ + +P NG + GL Q
Sbjct: 913 CLATPCQNNGTCVSDVTGSYHCTCPFGYKGRNCEIPINACISLPCTNGGTCHLTPGLDGQ 972
Query: 104 Y 104
Y
Sbjct: 973 Y 973
Score = 102 (41.0 bits), Expect = 8.4e-05, Sum P(3) = 8.4e-05
Identities = 21/51 (41%), Positives = 27/51 (52%)
Query: 36 KGRSKECLEDKCNKTPCEHGGKCITTPG--SSY-CLCPLGFTGDLCQTRLD 83
KGR+ E + C PC +GG C TPG Y C+CP G+ G C+ D
Sbjct: 941 KGRNCEIPINACISLPCTNGGTCHLTPGLDGQYSCVCPPGYEGQQCELNPD 991
Score = 96 (38.9 bits), Expect = 0.00035, Sum P(3) = 0.00035
Identities = 17/55 (30%), Positives = 28/55 (50%)
Query: 36 KGRSKECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQFN 90
+G+ E D C CE+ C+ + C+CP + GDLC+ +D +P F+
Sbjct: 982 EGQQCELNPDDCEDNDCENNSTCVDGINNYTCVCPPNYKGDLCEEVVDPCLPGFD 1036
Score = 66 (28.3 bits), Expect = 2.5e-05, Sum P(3) = 2.5e-05
Identities = 14/66 (21%), Positives = 32/66 (48%)
Query: 340 NIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGV 399
+I ++ T +G++L+ + D LAL ++ G+ ++Y +N+G+
Sbjct: 1175 HISFQVATDKDNGILLY---KEDHDPLALELYQGHIRLIYDISKYPPTTVYSVESVNDGL 1231
Query: 400 WHRLTV 405
+H + V
Sbjct: 1232 FHTVEV 1237
Score = 60 (26.2 bits), Expect = 2.5e-05, Sum P(3) = 2.5e-05
Identities = 17/52 (32%), Positives = 24/52 (46%)
Query: 262 PCIT--QPCGSGS-CVPLYDGYKCVCT-----QSCKESHLTEVMCASFDHGA 305
PC+ C S CVPL GY+C C Q C++ + + + HGA
Sbjct: 1030 PCLPGFDLCQHDSKCVPLSKGYRCECLPGYVGQQCEQDY-NDCLENKCQHGA 1080
Score = 59 (25.8 bits), Expect = 3.2e-05, Sum P(3) = 3.2e-05
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 263 CITQPCGSGS-CVPLYDGYKCVCTQ 286
C+ C G+ CV +GY CVC +
Sbjct: 1071 CLENKCQHGAECVDAINGYTCVCKE 1095
Score = 56 (24.8 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 9/23 (39%), Positives = 11/23 (47%)
Query: 262 PCITQPCGSGSCVPLYDGYKCVC 284
PC + C G CV Y C+C
Sbjct: 1363 PCESSRCVHGECVAKGSSYSCLC 1385
Score = 48 (22.0 bits), Expect = 0.00038, Sum P(3) = 0.00038
Identities = 12/36 (33%), Positives = 16/36 (44%)
Query: 263 CITQPCGSGS-CVPLYDGYKCVCTQSCKESHLTEVM 297
C C + S CV + Y CVC + K EV+
Sbjct: 993 CEDNDCENNSTCVDGINNYTCVCPPNYKGDLCEEVV 1028
>UNIPROTKB|I3LB93 [details] [associations]
symbol:NOTCH3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0072104 "glomerular capillary formation" evidence=IEA]
[GO:0048663 "neuron fate commitment" evidence=IEA] [GO:0048661
"positive regulation of smooth muscle cell proliferation"
evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA] [GO:0030900 "forebrain development"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005509 "calcium
ion binding" evidence=IEA] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 Pfam:PF07645 PROSITE:PS01187
PROSITE:PS50026 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005886 GO:GO:0048661 GO:GO:0030900 GO:GO:0045665
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
PROSITE:PS00010 GO:GO:0048663 GO:GO:0072104 Pfam:PF12661
GeneTree:ENSGT00700000104305 EMBL:CU467692
ProteinModelPortal:I3LB93 Ensembl:ENSSSCT00000029966 Uniprot:I3LB93
Length = 1250
Score = 137 (53.3 bits), Expect = 2.3e-08, Sum P(3) = 2.3e-08
Identities = 24/46 (52%), Positives = 30/46 (65%)
Query: 36 KGRSKECLEDKCNKT-PCEHGGKCITTPGSSYCLCPLGFTGDLCQT 80
+GRS D+C PC HGG C+ TPGS +C CP GFTG LC++
Sbjct: 112 QGRSCRSDVDECRVGGPCRHGGTCLNTPGSFHCQCPAGFTGPLCES 157
Score = 118 (46.6 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 19/42 (45%), Positives = 27/42 (64%)
Query: 37 GRSKECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLC 78
G + L D C++ PC++GG+C S YCLCP G++G LC
Sbjct: 904 GAQCQTLVDWCSRVPCQNGGRCARAGASFYCLCPPGWSGRLC 945
Score = 110 (43.8 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 24/54 (44%), Positives = 26/54 (48%)
Query: 45 DKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDL--QVPQFNGSSYLR 96
D C PC HGG C C CP GFTG CQT +D +VP NG R
Sbjct: 874 DPCLSRPCLHGGICTAAHPGFRCACPEGFTGAQCQTLVDWCSRVPCQNGGRCAR 927
Score = 108 (43.1 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 19/47 (40%), Positives = 23/47 (48%)
Query: 37 GRSKECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLD 83
G E D+C PC HGGKC+ C CP G TG C+ +D
Sbjct: 537 GTRCESQVDECRSQPCRHGGKCLDLVDKYLCRCPPGTTGVNCEVNID 583
Score = 106 (42.4 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 18/38 (47%), Positives = 24/38 (63%)
Query: 45 DKCN--KTPCEHGGKCITTPGSSYCLCPLGFTGDLCQT 80
D+C+ PCEH G+C+ T GS C C G+TG C+T
Sbjct: 354 DECSIGANPCEHLGRCVNTQGSFLCQCGRGYTGPRCET 391
Score = 105 (42.0 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 16/39 (41%), Positives = 22/39 (56%)
Query: 45 DKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLD 83
D+C TPC +G KC+ P C C GF G +C+ +D
Sbjct: 470 DECASTPCRNGAKCVDQPDGYECRCAEGFEGTVCERNVD 508
Score = 101 (40.6 bits), Expect = 7.8e-05, Sum P(2) = 7.8e-05
Identities = 19/50 (38%), Positives = 26/50 (52%)
Query: 45 DKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLD--LQVPQFNGS 92
D+C +PC +GG C C CP GF+G +CQ +D P NG+
Sbjct: 432 DECQSSPCVNGGVCKDKVNGFSCTCPSGFSGAMCQLDVDECASTPCRNGA 481
Score = 101 (40.6 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 38 RSKEC-LEDKCNKTPCEHGGKC-ITTPGSSYCLCPLGFTGDLCQTRLD 83
R +C L D C +PC HG +C + + G C CP G+ G C++ +D
Sbjct: 74 RGPDCSLPDPCLSSPCAHGARCSVGSDGRYICSCPPGYQGRSCRSDVD 121
Score = 96 (38.9 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 18/43 (41%), Positives = 21/43 (48%)
Query: 43 LEDKCNKTPCEHGGKCITTP--GSSYCLCPLGFTGDLCQTRLD 83
L+D C PC C T P G + C CP GFTG C +D
Sbjct: 312 LDDACVSNPCHEDAICDTNPVNGRAICTCPPGFTGGACDQDVD 354
Score = 94 (38.1 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 18/46 (39%), Positives = 24/46 (52%)
Query: 42 CLED--KCNKTP--CEHGGKCITTPGSSYCLCPLGFTGDLCQTRLD 83
C ED +C P C +GG C T G C+C G+TG+ C +D
Sbjct: 232 CTEDVDECQLQPNACHNGGTCFNTLGGHSCVCVNGWTGESCSQNID 277
Score = 92 (37.4 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 15/39 (38%), Positives = 23/39 (58%)
Query: 45 DKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLD 83
D C+ PC HG +C+ S C C G+TG C++++D
Sbjct: 508 DDCSPDPCHHG-RCVDGIASFSCACAPGYTGTRCESQVD 545
Score = 81 (33.6 bits), Expect = 2.3e-08, Sum P(3) = 2.3e-08
Identities = 17/46 (36%), Positives = 22/46 (47%)
Query: 260 AHPCITQPCGSGSCVPLYDGYKCVCTQS-----CKESHLTEVMCAS 300
+HPC +PC G C G++CVC C +S LT C S
Sbjct: 657 SHPCAQEPCSHGVCHDAPGGFRCVCEPGWSGPQCSQS-LTRDACES 701
Score = 73 (30.8 bits), Expect = 7.5e-08, Sum P(2) = 7.5e-08
Identities = 12/38 (31%), Positives = 20/38 (52%)
Query: 253 GVNVVNCAH---PCITQPC-GSGSCVPLYDGYKCVCTQ 286
G +C H PC+++PC G C + G++C C +
Sbjct: 863 GYTGAHCQHEADPCLSRPCLHGGICTAAHPGFRCACPE 900
Score = 69 (29.3 bits), Expect = 3.6e-07, Sum P(3) = 3.6e-07
Identities = 11/23 (47%), Positives = 16/23 (69%)
Query: 263 CITQPCGSG-SCVPLYDGYKCVC 284
C + PCG G SCV +G++C+C
Sbjct: 622 CASSPCGEGGSCVDGENGFRCLC 644
Score = 65 (27.9 bits), Expect = 9.1e-07, Sum P(3) = 9.1e-07
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 263 CITQPCGSGS-CVPLYDGYKCVCTQ 286
C + PC +G+ CV DGY+C C +
Sbjct: 472 CASTPCRNGAKCVDQPDGYECRCAE 496
Score = 64 (27.6 bits), Expect = 1.1e-06, Sum P(3) = 1.1e-06
Identities = 11/24 (45%), Positives = 13/24 (54%)
Query: 262 PCITQPCG-SGSCVPLYDGYKCVC 284
PC+ QPC G+C GY C C
Sbjct: 999 PCLAQPCQHGGTCQGYMGGYVCEC 1022
Score = 62 (26.9 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 263 CITQPCGSGSCVPLYDGYKCVC 284
C++ PCG G+C + C C
Sbjct: 801 CLSSPCGPGTCTDHVASFTCTC 822
Score = 61 (26.5 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 22/69 (31%), Positives = 28/69 (40%)
Query: 253 GVNVVNCAHPCITQPCGSGS-CVPLYDGYKCVCTQSCKESHLTEVMCA--SFDHGASFLH 309
G N + C +QPC G C+ L Y C SC L V+C D G
Sbjct: 1028 GDNCEDDVDECASQPCQHGGFCIDLVARYLC----SCPPGTLG-VLCEINEDDCGLGSPL 1082
Query: 310 YLDPEIIHS 318
LDP +H+
Sbjct: 1083 DLDPRCLHN 1091
Score = 61 (26.5 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 18/68 (26%), Positives = 23/68 (33%)
Query: 249 EAIQGVNVVNCAHPCITQPCGSGSCVPLYDGYKCVC----TQSCKESHLTEVMCASFDHG 304
E +G C PC G CV + C C T + ES + E HG
Sbjct: 496 EGFEGTVCERNVDDCSPDPCHHGRCVDGIASFSCACAPGYTGTRCESQVDECRSQPCRHG 555
Query: 305 ASFLHYLD 312
L +D
Sbjct: 556 GKCLDLVD 563
Score = 59 (25.8 bits), Expect = 3.6e-06, Sum P(3) = 3.6e-06
Identities = 11/23 (47%), Positives = 13/23 (56%)
Query: 263 CITQPCG-SGSCVPLYDGYKCVC 284
C +QPC G C+ L D Y C C
Sbjct: 547 CRSQPCRHGGKCLDLVDKYLCRC 569
Score = 58 (25.5 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 13/35 (37%), Positives = 15/35 (42%)
Query: 253 GVNVVNCA---HPCITQPCGSGSCVPLYDGYKCVC 284
G VNC C + PC G C + Y CVC
Sbjct: 572 GTTGVNCEVNIDDCASNPCTFGLCRDGLNRYDCVC 606
Score = 54 (24.1 bits), Expect = 1.3e-05, Sum P(4) = 1.3e-05
Identities = 16/52 (30%), Positives = 24/52 (46%)
Query: 263 CITQP--C-GSGSCVPLYDGYKCVCT-----QSCKESHLTEVMCASFDHGAS 306
C QP C G+C G+ CVC +SC ++ + + A HGA+
Sbjct: 239 CQLQPNACHNGGTCFNTLGGHSCVCVNGWTGESCSQN-IDDCATAVCFHGAT 289
Score = 51 (23.0 bits), Expect = 3.5e-05, Sum P(3) = 3.5e-05
Identities = 14/43 (32%), Positives = 18/43 (41%)
Query: 254 VNVVNC-AHPCITQPCGSGSCVPLYDGYKCVCTQSCKESHLTE 295
VNV +C H C+ G+CV + Y C C TE
Sbjct: 196 VNVDDCPGHRCLN----GGTCVDGVNTYNCQCPPEWTGQFCTE 234
Score = 49 (22.3 bits), Expect = 3.5e-05, Sum P(3) = 3.5e-05
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 270 SGSCVPLYDGYKCVC 284
+G+CV L G++C C
Sbjct: 1091 NGTCVDLVGGFRCSC 1105
Score = 49 (22.3 bits), Expect = 3.5e-05, Sum P(3) = 3.5e-05
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 263 CITQPCGSGS-CVPLYDGYKCVC 284
C + PC +G C +G+ C C
Sbjct: 434 CQSSPCVNGGVCKDKVNGFSCTC 456
Score = 48 (22.0 bits), Expect = 7.0e-05, Sum P(3) = 7.0e-05
Identities = 11/27 (40%), Positives = 12/27 (44%)
Query: 260 AHPCITQPC-GSGSCVPLYD-GYKCVC 284
A PC PC G+C D Y C C
Sbjct: 159 AVPCAPSPCRNGGTCRQSGDLTYDCAC 185
Score = 47 (21.6 bits), Expect = 5.6e-05, Sum P(3) = 5.6e-05
Identities = 14/53 (26%), Positives = 22/53 (41%)
Query: 264 ITQPC-GSGSCVPLYDGYKCVCTQSCKESHLTEVM--CAS--FDHGASFLHYL 311
+ Q C G CV + CVC + SH + + C + HG + Y+
Sbjct: 963 VEQLCQAGGQCVDKDGSHYCVCPEGRTGSHCEQEVDPCLAQPCQHGGTCQGYM 1015
Score = 44 (20.5 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 10/27 (37%), Positives = 11/27 (40%)
Query: 262 PCITQPCGSGSCVPLYDGYKCVCTQSC 288
PC+ PC G G VC SC
Sbjct: 735 PCVPNPCEHGGHCESATGQLVVC--SC 759
Score = 43 (20.2 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 8/15 (53%), Positives = 9/15 (60%)
Query: 262 PCITQPCG-SGSCVP 275
PC +QPC G C P
Sbjct: 1161 PCESQPCQHGGQCRP 1175
Score = 41 (19.5 bits), Expect = 2.3e-08, Sum P(3) = 2.3e-08
Identities = 7/15 (46%), Positives = 8/15 (53%)
Query: 248 GEAIQGVNVVNCAHP 262
G + GVN NC P
Sbjct: 210 GTCVDGVNTYNCQCP 224
Score = 41 (19.5 bits), Expect = 0.00022, Sum P(3) = 0.00022
Identities = 8/31 (25%), Positives = 12/31 (38%)
Query: 263 CITQPC-GSGSCVPLYDGYKCVCTQSCKESH 292
C C G+CV + C+C +H
Sbjct: 838 CSPSSCFNGGTCVDGVTSFTCLCRPGYTGAH 868
Score = 39 (18.8 bits), Expect = 1.3e-05, Sum P(4) = 1.3e-05
Identities = 9/33 (27%), Positives = 16/33 (48%)
Query: 428 EFKCLSIQRLHRTGKQCLIRIDTDYSMQSISGG 460
+F C+ + TG C + +D S ++GG
Sbjct: 413 QFTCICMAGF--TGTYCEVDMDECQSSPCVNGG 443
>UNIPROTKB|J9P5A2 [details] [associations]
symbol:CELSR1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0004930 "G-protein
coupled receptor activity" evidence=IEA] [GO:0007218 "neuropeptide
signaling pathway" evidence=IEA] [GO:0007156 "homophilic cell
adhesion" evidence=IEA] [GO:0005509 "calcium ion binding"
evidence=IEA] InterPro:IPR000203 InterPro:IPR000742
InterPro:IPR000832 InterPro:IPR001879 InterPro:IPR001881
InterPro:IPR002126 InterPro:IPR015919 InterPro:IPR017981
InterPro:IPR017983 InterPro:IPR020894 Pfam:PF00002 Pfam:PF00008
Pfam:PF00028 Pfam:PF01825 Pfam:PF02793 PRINTS:PR00205
PRINTS:PR00249 PROSITE:PS00232 PROSITE:PS00650 PROSITE:PS50026
PROSITE:PS50221 PROSITE:PS50227 PROSITE:PS50261 PROSITE:PS50268
SMART:SM00008 SMART:SM00112 SMART:SM00179 SMART:SM00181
SMART:SM00303 InterPro:IPR000152 GO:GO:0016021 GO:GO:0005886
GO:GO:0004930 GO:GO:0007218 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 SMART:SM00180
SMART:SM00282 PROSITE:PS00010 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 GO:GO:0007156 SUPFAM:SSF49313 InterPro:IPR022624
Pfam:PF12003 Gene3D:2.60.40.60 GeneTree:ENSGT00700000104170
Pfam:PF02210 EMBL:AAEX03007209 EMBL:AAEX03007210 EMBL:AAEX03007211
EMBL:AAEX03007212 EMBL:AAEX03007213 EMBL:AAEX03007214
EMBL:AAEX03007215 Ensembl:ENSCAFT00000048271 Uniprot:J9P5A2
Length = 2668
Score = 187 (70.9 bits), Expect = 2.4e-08, Sum P(3) = 2.4e-08
Identities = 71/257 (27%), Positives = 113/257 (43%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQ-FNGSSYLRYQGLGEQYL 105
C+ T C++GG C++ C CPL F G C+ + PQ F+G S + + L
Sbjct: 1370 CDGTWCQNGGTCVSRWNMYLCECPLRFGGKNCEQVMPH--PQRFSGESIVSWSDLDITIS 1427
Query: 106 SLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDF-TFDLGTGAATLR-SSN 163
L ++F+ + +G+L+ GV + L + + YV F F + A++ S +
Sbjct: 1428 VPWYLGLMFRTRKEDGVLM---EATAGVSSRLHLQILNNYVQFEVFHGPSDVASMSLSRS 1484
Query: 164 PISLGEWH----KLRLTRTGRHA-YLQV---DRFPSSQILSPGPFTQXXXXXXXXXGGVP 215
++ GEWH +L+ + G+ YL V D + G GGV
Sbjct: 1485 RVTDGEWHHLLIELKSAKEGKDIKYLAVMTLDYGLDQDTVQIGNQLPGLKMRSIVVGGVS 1544
Query: 216 DYNIVSPKVKIKSSFIGCIQKVLINNHELNI----LGEAIQGVNVVN-C--AHPCITQPC 268
+ KV + F GC+Q V + NI + +A++ V V + C PC + PC
Sbjct: 1545 E-----DKVTVHRGFRGCMQGVRMGETSTNIAMLNMNDALK-VRVKDGCDVEDPCTSSPC 1598
Query: 269 GSGS-CVPLYDGYKCVC 284
S C +DGY CVC
Sbjct: 1599 PQHSRCHNAWDGYSCVC 1615
Score = 160 (61.4 bits), Expect = 2.3e-06, Sum P(3) = 2.3e-06
Identities = 42/134 (31%), Positives = 66/134 (49%)
Query: 46 KCNKTPCEHGGKCITTP-GSSYCLCPLG-FTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQ 103
+C C++GG C+ G +C+CP G F C+ + F S++ ++GL ++
Sbjct: 1123 RCANGVCKNGGTCVNLLIGGFHCVCPPGEFERPYCE----VTTRSFPPRSFVTFRGLRQR 1178
Query: 104 YLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSN 163
+ + LT F E N +LLYNG R + DFIAL + V TF G T+
Sbjct: 1179 FHFTVSLT--FATQERNALLLYNG-RFNEKHDFIALEIVSEQVQLTFSAGETTTTVTPQV 1235
Query: 164 P--ISLGEWHKLRL 175
P +S G WH +++
Sbjct: 1236 PGGVSDGRWHSVQV 1249
Score = 51 (23.0 bits), Expect = 2.3e-06, Sum P(3) = 2.3e-06
Identities = 35/196 (17%), Positives = 70/196 (35%)
Query: 212 GGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNCAHPCITQPCGSG 271
GGVP N+ F+GC++ + ++ +++ CA C
Sbjct: 1318 GGVP--NLPEDFPVHNRQFVGCMRNLSVDGKNVDMASFIANNGTRAGCAAQ--RNFCDGT 1373
Query: 272 SCVPLYDGYKCVCTQSCKESHLTEVMCASFDHGASFLHYLD-PEIIHSSGLLHYKFQLHV 330
C +G CV S +L E C G + + P+ ++ + L +
Sbjct: 1374 WC---QNGGTCV---SRWNMYLCE--CPLRFGGKNCEQVMPHPQRFSGESIVSWS-DLDI 1424
Query: 331 DFRITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHV-MYXXXXXXXXXX 389
+ Y + + +T G+++ + S L L I N Y ++
Sbjct: 1425 TISVPWY---LGLMFRTRKEDGVLMEATAGVSSR-LHLQILNNYVQFEVFHGPSDVASMS 1480
Query: 390 XXQTKINNGVWHRLTV 405
++++ +G WH L +
Sbjct: 1481 LSRSRVTDGEWHHLLI 1496
Score = 41 (19.5 bits), Expect = 2.4e-08, Sum P(3) = 2.4e-08
Identities = 6/14 (42%), Positives = 10/14 (71%)
Query: 47 CNKTPCEHGGKCIT 60
C + PCE+ KC++
Sbjct: 1024 CLREPCENYMKCVS 1037
Score = 41 (19.5 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 11/39 (28%), Positives = 21/39 (53%)
Query: 213 GVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAI 251
G PD+ +S + + SF+G + V+I N + +L +
Sbjct: 2315 GNPDFCWLSLRDTLIWSFVGPVGTVIIVNTVIFVLSAKV 2353
Score = 38 (18.4 bits), Expect = 2.4e-08, Sum P(3) = 2.4e-08
Identities = 10/23 (43%), Positives = 11/23 (47%)
Query: 262 PCITQPCGSGSCVPLYDGYKCVC 284
PC P GS S D +CVC
Sbjct: 1719 PCDCFPHGSHSRACDMDTGQCVC 1741
Score = 37 (18.1 bits), Expect = 2.3e-06, Sum P(3) = 2.3e-06
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 402 RLTVHRNFMVVMHG 415
++TVHR F M G
Sbjct: 1547 KVTVHRGFRGCMQG 1560
>RGD|69311 [details] [associations]
symbol:Slit3 "slit homolog 3 (Drosophila)" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005615 "extracellular
space" evidence=IEA;ISO] [GO:0007411 "axon guidance" evidence=ISO]
[GO:0007420 "brain development" evidence=IEP] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA;ISO] [GO:0009887
"organ morphogenesis" evidence=IEA;ISO] [GO:0010629 "negative
regulation of gene expression" evidence=IEA;ISO] [GO:0016020
"membrane" evidence=IDA] [GO:0021510 "spinal cord development"
evidence=IEP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA;ISO]
[GO:0032870 "cellular response to hormone stimulus"
evidence=IEA;ISO] [GO:0035385 "Roundabout signaling pathway"
evidence=IEA;ISO] [GO:0048495 "Roundabout binding" evidence=IEA;ISO]
[GO:0048846 "axon extension involved in axon guidance"
evidence=IEA;ISO] [GO:0050919 "negative chemotaxis"
evidence=IEA;ISO] [GO:0051414 "response to cortisol stimulus"
evidence=IEA;ISO] [GO:0061364 "apoptotic process involved in
luteolysis" evidence=IEA;ISO] [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IEA;ISO] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0021834 "chemorepulsion involved
in embryonic olfactory bulb interneuron precursor migration"
evidence=ISO] InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 RGD:69311 GO:GO:0008285 GO:GO:0005615
GO:GO:0007420 GO:GO:0016020 GO:GO:0030308 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887
PROSITE:PS01186 GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791
SMART:SM00282 PROSITE:PS50025 GO:GO:0021510 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
GO:GO:0070100 Pfam:PF12661 Pfam:PF01463 GO:GO:0051414 GO:GO:0050919
GO:GO:0035385 GO:GO:0061364 HOGENOM:HOG000116120 HOVERGEN:HBG057959
OrthoDB:EOG4D7Z4T CTD:6586 KO:K06850 EMBL:AB011531 IPI:IPI00207574
PIR:T13953 RefSeq:NP_112611.1 UniGene:Rn.12298
ProteinModelPortal:O88280 SMR:O88280 IntAct:O88280 STRING:O88280
PRIDE:O88280 GeneID:83467 KEGG:rno:83467 UCSC:RGD:69311
InParanoid:O88280 NextBio:615863 ArrayExpress:O88280
Genevestigator:O88280 GermOnline:ENSRNOG00000007377 Uniprot:O88280
Length = 1523
Score = 149 (57.5 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 60/245 (24%), Positives = 94/245 (38%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQFNGS-SYLRYQGLGEQYL 105
C++ C++G +CI C CP GF G C+ + + F G SY+ +
Sbjct: 1123 CDQYECQNGAQCIVVQQEPTCRCPPGFAGPRCEKLITVN---FVGKDSYVELASAKVRPQ 1179
Query: 106 SLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFD-LGTGAATLRSSNP 164
+ + L + + NGILLY G D +AL L +V +D L + T+ S
Sbjct: 1180 ANISLQVATD--KDNGILLYKGDN-----DPLALELYQGHVRLVYDSLSSPPTTVYSVET 1232
Query: 165 ISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSP-- 222
++ G++H + L + L VD+ + GG+P +S
Sbjct: 1233 VNDGQFHSVELVMLNQTLNLVVDKGAPKSLGKLQKQPAVGINSPLYLGGIPTSTGLSALR 1292
Query: 223 --KVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNCAHPCITQPCGSGSCVPLY-DG 279
+ F GCI +V INN + Q + V C C G C + D
Sbjct: 1293 QGADRPLGGFHGCIHEVRINNELQDFKALPPQSLGVSPGCKSCTV--CRHGLCRSVEKDS 1350
Query: 280 YKCVC 284
C C
Sbjct: 1351 VVCEC 1355
Score = 104 (41.7 bits), Expect = 4.3e-06, Sum P(3) = 4.3e-06
Identities = 18/55 (32%), Positives = 28/55 (50%)
Query: 36 KGRSKECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQFN 90
+G+ E D C CE+ C+ + C+CP +TG+LC +D VP+ N
Sbjct: 989 EGQRCEINPDDCEDNDCENSATCVDGINNYACVCPPNYTGELCDEVIDYCVPEMN 1043
Score = 92 (37.4 bits), Expect = 7.7e-05, Sum P(3) = 7.7e-05
Identities = 20/52 (38%), Positives = 27/52 (51%)
Query: 38 RSKECLE--DKCNKTPCEHGGKCITTP----GSSYCLCPLGFTGDLCQTRLD 83
+ K+C + C + PC+HGG C + G S C CPLGF G C+ D
Sbjct: 948 KGKDCTVPINTCVQNPCQHGGTCHLSESHRDGFS-CSCPLGFEGQRCEINPD 998
Score = 74 (31.1 bits), Expect = 4.3e-06, Sum P(3) = 4.3e-06
Identities = 15/62 (24%), Positives = 31/62 (50%)
Query: 340 NIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGV 399
NI +++ T +G++L+ G + D LAL ++ G+ ++Y +N+G
Sbjct: 1181 NISLQVATDKDNGILLYKGDN---DPLALELYQGHVRLVYDSLSSPPTTVYSVETVNDGQ 1237
Query: 400 WH 401
+H
Sbjct: 1238 FH 1239
Score = 67 (28.6 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 14/50 (28%), Positives = 23/50 (46%)
Query: 262 PCITQPCGSGSCVPLYDGYKCVCTQS-----CKESHLTEVMCASFD--HG 304
PC+ C G+CV + Y C C + C + + + C++F HG
Sbjct: 1371 PCLGHSCSHGTCVATGNSYVCKCAEGYEGPLCDQKNDSANACSAFKCHHG 1420
Score = 63 (27.2 bits), Expect = 4.3e-06, Sum P(3) = 4.3e-06
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 263 CITQPCGSGS-CVPLYDGYKCVCTQ 286
C+ C G+ CV +GY C+C Q
Sbjct: 1078 CVAHKCRHGAQCVDAVNGYTCICPQ 1102
>UNIPROTKB|O88280 [details] [associations]
symbol:Slit3 "Slit homolog 3 protein" species:10116 "Rattus
norvegicus" [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
RGD:69311 GO:GO:0008285 GO:GO:0005615 GO:GO:0007420 GO:GO:0016020
GO:GO:0030308 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887 PROSITE:PS01186
GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791 SMART:SM00282
PROSITE:PS50025 GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 GO:GO:0048846 GO:GO:0070100 Pfam:PF12661
Pfam:PF01463 GO:GO:0051414 GO:GO:0050919 GO:GO:0035385
GO:GO:0061364 HOGENOM:HOG000116120 HOVERGEN:HBG057959
OrthoDB:EOG4D7Z4T CTD:6586 KO:K06850 EMBL:AB011531 IPI:IPI00207574
PIR:T13953 RefSeq:NP_112611.1 UniGene:Rn.12298
ProteinModelPortal:O88280 SMR:O88280 IntAct:O88280 STRING:O88280
PRIDE:O88280 GeneID:83467 KEGG:rno:83467 UCSC:RGD:69311
InParanoid:O88280 NextBio:615863 ArrayExpress:O88280
Genevestigator:O88280 GermOnline:ENSRNOG00000007377 Uniprot:O88280
Length = 1523
Score = 149 (57.5 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 60/245 (24%), Positives = 94/245 (38%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQFNGS-SYLRYQGLGEQYL 105
C++ C++G +CI C CP GF G C+ + + F G SY+ +
Sbjct: 1123 CDQYECQNGAQCIVVQQEPTCRCPPGFAGPRCEKLITVN---FVGKDSYVELASAKVRPQ 1179
Query: 106 SLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFD-LGTGAATLRSSNP 164
+ + L + + NGILLY G D +AL L +V +D L + T+ S
Sbjct: 1180 ANISLQVATD--KDNGILLYKGDN-----DPLALELYQGHVRLVYDSLSSPPTTVYSVET 1232
Query: 165 ISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSP-- 222
++ G++H + L + L VD+ + GG+P +S
Sbjct: 1233 VNDGQFHSVELVMLNQTLNLVVDKGAPKSLGKLQKQPAVGINSPLYLGGIPTSTGLSALR 1292
Query: 223 --KVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNCAHPCITQPCGSGSCVPLY-DG 279
+ F GCI +V INN + Q + V C C G C + D
Sbjct: 1293 QGADRPLGGFHGCIHEVRINNELQDFKALPPQSLGVSPGCKSCTV--CRHGLCRSVEKDS 1350
Query: 280 YKCVC 284
C C
Sbjct: 1351 VVCEC 1355
Score = 104 (41.7 bits), Expect = 4.3e-06, Sum P(3) = 4.3e-06
Identities = 18/55 (32%), Positives = 28/55 (50%)
Query: 36 KGRSKECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQFN 90
+G+ E D C CE+ C+ + C+CP +TG+LC +D VP+ N
Sbjct: 989 EGQRCEINPDDCEDNDCENSATCVDGINNYACVCPPNYTGELCDEVIDYCVPEMN 1043
Score = 92 (37.4 bits), Expect = 7.7e-05, Sum P(3) = 7.7e-05
Identities = 20/52 (38%), Positives = 27/52 (51%)
Query: 38 RSKECLE--DKCNKTPCEHGGKCITTP----GSSYCLCPLGFTGDLCQTRLD 83
+ K+C + C + PC+HGG C + G S C CPLGF G C+ D
Sbjct: 948 KGKDCTVPINTCVQNPCQHGGTCHLSESHRDGFS-CSCPLGFEGQRCEINPD 998
Score = 74 (31.1 bits), Expect = 4.3e-06, Sum P(3) = 4.3e-06
Identities = 15/62 (24%), Positives = 31/62 (50%)
Query: 340 NIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGV 399
NI +++ T +G++L+ G + D LAL ++ G+ ++Y +N+G
Sbjct: 1181 NISLQVATDKDNGILLYKGDN---DPLALELYQGHVRLVYDSLSSPPTTVYSVETVNDGQ 1237
Query: 400 WH 401
+H
Sbjct: 1238 FH 1239
Score = 67 (28.6 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 14/50 (28%), Positives = 23/50 (46%)
Query: 262 PCITQPCGSGSCVPLYDGYKCVCTQS-----CKESHLTEVMCASFD--HG 304
PC+ C G+CV + Y C C + C + + + C++F HG
Sbjct: 1371 PCLGHSCSHGTCVATGNSYVCKCAEGYEGPLCDQKNDSANACSAFKCHHG 1420
Score = 63 (27.2 bits), Expect = 4.3e-06, Sum P(3) = 4.3e-06
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 263 CITQPCGSGS-CVPLYDGYKCVCTQ 286
C+ C G+ CV +GY C+C Q
Sbjct: 1078 CVAHKCRHGAQCVDAVNGYTCICPQ 1102
>UNIPROTKB|I3L9D5 [details] [associations]
symbol:NOTCH3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0005509 "calcium ion
binding" evidence=IEA] InterPro:IPR000742 InterPro:IPR000800
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 Pfam:PF00066
Pfam:PF07645 PRINTS:PR01452 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS50258 SMART:SM00004 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 GO:GO:0030154 GO:GO:0016020 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186 PROSITE:PS00010
GeneTree:ENSGT00700000104305 SUPFAM:SSF90193 EMBL:CU467692
Ensembl:ENSSSCT00000025522 OMA:VCPRGTE Uniprot:I3L9D5
Length = 1175
Score = 137 (53.3 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 24/46 (52%), Positives = 30/46 (65%)
Query: 36 KGRSKECLEDKCNKT-PCEHGGKCITTPGSSYCLCPLGFTGDLCQT 80
+GRS D+C PC HGG C+ TPGS +C CP GFTG LC++
Sbjct: 85 QGRSCRSDVDECRVGGPCRHGGTCLNTPGSFHCQCPAGFTGPLCES 130
Score = 118 (46.6 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 19/42 (45%), Positives = 27/42 (64%)
Query: 37 GRSKECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLC 78
G + L D C++ PC++GG+C S YCLCP G++G LC
Sbjct: 746 GAQCQTLVDWCSRVPCQNGGRCARAGASFYCLCPPGWSGRLC 787
Score = 110 (43.8 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 24/54 (44%), Positives = 26/54 (48%)
Query: 45 DKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDL--QVPQFNGSSYLR 96
D C PC HGG C C CP GFTG CQT +D +VP NG R
Sbjct: 716 DPCLSRPCLHGGICTAAHPGFRCACPEGFTGAQCQTLVDWCSRVPCQNGGRCAR 769
Score = 109 (43.4 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 45 DKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLD 83
D+C TPC +G KC+ P C C G+TG C++++D
Sbjct: 446 DECASTPCRNGAKCVDQPDGFSCACAPGYTGTRCESQVD 484
Score = 109 (43.4 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 18/40 (45%), Positives = 23/40 (57%)
Query: 41 ECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQT 80
EC + PCEH G+C+ T GS C C G+TG C+T
Sbjct: 328 ECSIGEAGANPCEHLGRCVNTQGSFLCQCGRGYTGPRCET 367
Score = 109 (43.4 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 19/47 (40%), Positives = 23/47 (48%)
Query: 37 GRSKECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLD 83
G E D+C PC HGGKC+ C CP G TG LC ++
Sbjct: 476 GTRCESQVDECRSQPCRHGGKCLDLVDKYLCRCPPGTTGPLCNMEIN 522
Score = 104 (41.7 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 52 CEHGGKCITTPGSSYCLCPLGFTGDLCQTRLD--LQVPQFNGSSYLRYQG 99
C+ GG+C+ GS YC+CP G TG C+ +D L P +G + Y G
Sbjct: 809 CQAGGQCVDKDGSHYCVCPEGRTGSHCEQEVDPCLAQPCQHGGTCQGYMG 858
Score = 103 (41.3 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 23/58 (39%), Positives = 29/58 (50%)
Query: 39 SKEC-LEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRL-DLQV-PQFNGSS 93
S++C L C PCEHGG C + GS C C G++G C + D P NG S
Sbjct: 593 SRQCELLSPCVPNPCEHGGHCESATGSFSCTCHEGYSGPSCDQDINDCDPNPCLNGGS 650
Score = 101 (40.6 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 19/50 (38%), Positives = 26/50 (52%)
Query: 45 DKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLD--LQVPQFNGS 92
D+C +PC +GG C C CP GF+G +CQ +D P NG+
Sbjct: 408 DECQSSPCVNGGVCKDKVNGFSCTCPSGFSGAMCQLDVDECASTPCRNGA 457
Score = 96 (38.9 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 18/43 (41%), Positives = 21/43 (48%)
Query: 43 LEDKCNKTPCEHGGKCITTP--GSSYCLCPLGFTGDLCQTRLD 83
L+D C PC C T P G + C CP GFTG C +D
Sbjct: 285 LDDACVSNPCHEDAICDTNPVNGRAICTCPPGFTGGACDQDVD 327
Score = 94 (38.1 bits), Expect = 0.00096, Sum P(2) = 0.00096
Identities = 18/46 (39%), Positives = 24/46 (52%)
Query: 42 CLED--KCNKTP--CEHGGKCITTPGSSYCLCPLGFTGDLCQTRLD 83
C ED +C P C +GG C T G C+C G+TG+ C +D
Sbjct: 205 CTEDVDECQLQPNACHNGGTCFNTLGGHSCVCVNGWTGESCSQNID 250
Score = 77 (32.2 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 260 AHPCITQPCGSGSCVPLYDGYKCVC 284
+HPC +PC G C G++CVC
Sbjct: 559 SHPCAQEPCSHGVCHDAPGGFRCVC 583
Score = 73 (30.8 bits), Expect = 6.5e-08, Sum P(2) = 6.5e-08
Identities = 12/38 (31%), Positives = 20/38 (52%)
Query: 253 GVNVVNCAH---PCITQPC-GSGSCVPLYDGYKCVCTQ 286
G +C H PC+++PC G C + G++C C +
Sbjct: 705 GYTGAHCQHEADPCLSRPCLHGGICTAAHPGFRCACPE 742
Score = 70 (29.7 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 253 GVNVVNCAHPCITQPCG-SGSCVPLYDGYKCVC 284
G N + C +QPC +G+CV L G++C C
Sbjct: 870 GDNCEDDVDECASQPCQHNGTCVDLVGGFRCSC 902
Score = 70 (29.7 bits), Expect = 2.4e-07, Sum P(3) = 2.4e-07
Identities = 18/55 (32%), Positives = 25/55 (45%)
Query: 263 CITQPCGSGS-CVPLYDGYKCVC----TQSCKESHLTEVMCASFDHGASFLHYLD 312
C + PC +G+ CV DG+ C C T + ES + E HG L +D
Sbjct: 448 CASTPCRNGAKCVDQPDGFSCACAPGYTGTRCESQVDECRSQPCRHGGKCLDLVD 502
Score = 69 (29.3 bits), Expect = 3.0e-07, Sum P(3) = 3.0e-07
Identities = 11/23 (47%), Positives = 16/23 (69%)
Query: 263 CITQPCGSG-SCVPLYDGYKCVC 284
C + PCG G SCV +G++C+C
Sbjct: 524 CASSPCGEGGSCVDGENGFRCLC 546
Score = 64 (27.6 bits), Expect = 9.3e-07, Sum P(3) = 9.3e-07
Identities = 11/24 (45%), Positives = 13/24 (54%)
Query: 262 PCITQPCG-SGSCVPLYDGYKCVC 284
PC+ QPC G+C GY C C
Sbjct: 841 PCLAQPCQHGGTCQGYMGGYVCEC 864
Score = 59 (25.8 bits), Expect = 2.9e-06, Sum P(3) = 2.9e-06
Identities = 11/23 (47%), Positives = 13/23 (56%)
Query: 263 CITQPCG-SGSCVPLYDGYKCVC 284
C +QPC G C+ L D Y C C
Sbjct: 486 CRSQPCRHGGKCLDLVDKYLCRC 508
Score = 55 (24.4 bits), Expect = 7.3e-06, Sum P(3) = 7.3e-06
Identities = 11/25 (44%), Positives = 14/25 (56%)
Query: 263 CITQPC-GSGSCVP--LYDGYKCVC 284
C+T PC GSC P L ++C C
Sbjct: 1048 CVTSPCLHGGSCRPESLAPFFRCAC 1072
Score = 54 (24.1 bits), Expect = 9.9e-06, Sum P(4) = 9.9e-06
Identities = 16/52 (30%), Positives = 24/52 (46%)
Query: 263 CITQP--C-GSGSCVPLYDGYKCVCT-----QSCKESHLTEVMCASFDHGAS 306
C QP C G+C G+ CVC +SC ++ + + A HGA+
Sbjct: 212 CQLQPNACHNGGTCFNTLGGHSCVCVNGWTGESCSQN-IDDCATAVCFHGAT 262
Score = 51 (23.0 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 8/24 (33%), Positives = 10/24 (41%)
Query: 262 PCITQPCGSGS-CVPLYDGYKCVC 284
PC+ PC G C + C C
Sbjct: 601 PCVPNPCEHGGHCESATGSFSCTC 624
Score = 51 (23.0 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 9/33 (27%), Positives = 15/33 (45%)
Query: 263 CITQPCG---SGSCVPLYDGYKCVCTQSCKESH 292
C++ PC G+CV + C+C +H
Sbjct: 678 CLSSPCSCFNGGTCVDGVTSFTCLCRPGYTGAH 710
Score = 51 (23.0 bits), Expect = 2.9e-05, Sum P(3) = 2.9e-05
Identities = 14/43 (32%), Positives = 18/43 (41%)
Query: 254 VNVVNC-AHPCITQPCGSGSCVPLYDGYKCVCTQSCKESHLTE 295
VNV +C H C+ G+CV + Y C C TE
Sbjct: 169 VNVDDCPGHRCLN----GGTCVDGVNTYNCQCPPEWTGQFCTE 207
Score = 49 (22.3 bits), Expect = 2.9e-05, Sum P(3) = 2.9e-05
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 263 CITQPCGSGS-CVPLYDGYKCVC 284
C + PC +G C +G+ C C
Sbjct: 410 CQSSPCVNGGVCKDKVNGFSCTC 432
Score = 48 (22.0 bits), Expect = 5.7e-05, Sum P(3) = 5.7e-05
Identities = 11/27 (40%), Positives = 12/27 (44%)
Query: 260 AHPCITQPC-GSGSCVPLYD-GYKCVC 284
A PC PC G+C D Y C C
Sbjct: 132 AVPCAPSPCRNGGTCRQSGDLTYDCAC 158
Score = 47 (21.6 bits), Expect = 4.5e-05, Sum P(3) = 4.5e-05
Identities = 14/53 (26%), Positives = 22/53 (41%)
Query: 264 ITQPC-GSGSCVPLYDGYKCVCTQSCKESHLTEVM--CAS--FDHGASFLHYL 311
+ Q C G CV + CVC + SH + + C + HG + Y+
Sbjct: 805 VEQLCQAGGQCVDKDGSHYCVCPEGRTGSHCEQEVDPCLAQPCQHGGTCQGYM 857
Score = 43 (20.2 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 8/15 (53%), Positives = 9/15 (60%)
Query: 262 PCITQPCG-SGSCVP 275
PC +QPC G C P
Sbjct: 958 PCESQPCQHGGQCRP 972
Score = 41 (19.5 bits), Expect = 2.4e-07, Sum P(3) = 2.4e-07
Identities = 7/15 (46%), Positives = 8/15 (53%)
Query: 248 GEAIQGVNVVNCAHP 262
G + GVN NC P
Sbjct: 183 GTCVDGVNTYNCQCP 197
Score = 39 (18.8 bits), Expect = 9.9e-06, Sum P(4) = 9.9e-06
Identities = 9/33 (27%), Positives = 16/33 (48%)
Query: 428 EFKCLSIQRLHRTGKQCLIRIDTDYSMQSISGG 460
+F C+ + TG C + +D S ++GG
Sbjct: 389 QFTCICMAGF--TGTYCEVDMDECQSSPCVNGG 419
>UNIPROTKB|F1PLY1 [details] [associations]
symbol:CELSR1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0004930 "G-protein
coupled receptor activity" evidence=IEA] [GO:0007218 "neuropeptide
signaling pathway" evidence=IEA] [GO:0007156 "homophilic cell
adhesion" evidence=IEA] [GO:0005509 "calcium ion binding"
evidence=IEA] InterPro:IPR000203 InterPro:IPR000742
InterPro:IPR000832 InterPro:IPR001879 InterPro:IPR001881
InterPro:IPR002126 InterPro:IPR015919 InterPro:IPR017981
InterPro:IPR017983 InterPro:IPR020894 Pfam:PF00002 Pfam:PF00008
Pfam:PF00028 Pfam:PF01825 Pfam:PF02793 PRINTS:PR00205
PRINTS:PR00249 PROSITE:PS00232 PROSITE:PS00650 PROSITE:PS50026
PROSITE:PS50221 PROSITE:PS50227 PROSITE:PS50261 PROSITE:PS50268
SMART:SM00008 SMART:SM00112 SMART:SM00179 SMART:SM00181
SMART:SM00303 InterPro:IPR000152 GO:GO:0016021 GO:GO:0005886
GO:GO:0004930 GO:GO:0007218 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 SMART:SM00180
SMART:SM00282 PROSITE:PS00010 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 GO:GO:0007156 SUPFAM:SSF49313 InterPro:IPR022624
Pfam:PF12003 Gene3D:2.60.40.60 GeneTree:ENSGT00700000104170
Pfam:PF02210 OMA:NKPNIGH EMBL:AAEX03007209 EMBL:AAEX03007210
EMBL:AAEX03007211 EMBL:AAEX03007212 EMBL:AAEX03007213
EMBL:AAEX03007214 EMBL:AAEX03007215 Ensembl:ENSCAFT00000001204
Uniprot:F1PLY1
Length = 2725
Score = 187 (70.9 bits), Expect = 2.6e-08, Sum P(3) = 2.6e-08
Identities = 71/257 (27%), Positives = 113/257 (43%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQ-FNGSSYLRYQGLGEQYL 105
C+ T C++GG C++ C CPL F G C+ + PQ F+G S + + L
Sbjct: 1448 CDGTWCQNGGTCVSRWNMYLCECPLRFGGKNCEQVMPH--PQRFSGESIVSWSDLDITIS 1505
Query: 106 SLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDF-TFDLGTGAATLR-SSN 163
L ++F+ + +G+L+ GV + L + + YV F F + A++ S +
Sbjct: 1506 VPWYLGLMFRTRKEDGVLM---EATAGVSSRLHLQILNNYVQFEVFHGPSDVASMSLSRS 1562
Query: 164 PISLGEWH----KLRLTRTGRHA-YLQV---DRFPSSQILSPGPFTQXXXXXXXXXGGVP 215
++ GEWH +L+ + G+ YL V D + G GGV
Sbjct: 1563 RVTDGEWHHLLIELKSAKEGKDIKYLAVMTLDYGLDQDTVQIGNQLPGLKMRSIVVGGVS 1622
Query: 216 DYNIVSPKVKIKSSFIGCIQKVLINNHELNI----LGEAIQGVNVVN-C--AHPCITQPC 268
+ KV + F GC+Q V + NI + +A++ V V + C PC + PC
Sbjct: 1623 E-----DKVTVHRGFRGCMQGVRMGETSTNIAMLNMNDALK-VRVKDGCDVEDPCTSSPC 1676
Query: 269 GSGS-CVPLYDGYKCVC 284
S C +DGY CVC
Sbjct: 1677 PQHSRCHNAWDGYSCVC 1693
Score = 160 (61.4 bits), Expect = 2.4e-06, Sum P(3) = 2.4e-06
Identities = 42/134 (31%), Positives = 66/134 (49%)
Query: 46 KCNKTPCEHGGKCITTP-GSSYCLCPLG-FTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQ 103
+C C++GG C+ G +C+CP G F C+ + F S++ ++GL ++
Sbjct: 1201 RCANGVCKNGGTCVNLLIGGFHCVCPPGEFERPYCE----VTTRSFPPRSFVTFRGLRQR 1256
Query: 104 YLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSN 163
+ + LT F E N +LLYNG R + DFIAL + V TF G T+
Sbjct: 1257 FHFTVSLT--FATQERNALLLYNG-RFNEKHDFIALEIVSEQVQLTFSAGETTTTVTPQV 1313
Query: 164 P--ISLGEWHKLRL 175
P +S G WH +++
Sbjct: 1314 PGGVSDGRWHSVQV 1327
Score = 51 (23.0 bits), Expect = 2.4e-06, Sum P(3) = 2.4e-06
Identities = 35/196 (17%), Positives = 70/196 (35%)
Query: 212 GGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNCAHPCITQPCGSG 271
GGVP N+ F+GC++ + ++ +++ CA C
Sbjct: 1396 GGVP--NLPEDFPVHNRQFVGCMRNLSVDGKNVDMASFIANNGTRAGCAAQ--RNFCDGT 1451
Query: 272 SCVPLYDGYKCVCTQSCKESHLTEVMCASFDHGASFLHYLD-PEIIHSSGLLHYKFQLHV 330
C +G CV S +L E C G + + P+ ++ + L +
Sbjct: 1452 WC---QNGGTCV---SRWNMYLCE--CPLRFGGKNCEQVMPHPQRFSGESIVSWS-DLDI 1502
Query: 331 DFRITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHV-MYXXXXXXXXXX 389
+ Y + + +T G+++ + S L L I N Y ++
Sbjct: 1503 TISVPWY---LGLMFRTRKEDGVLMEATAGVSSR-LHLQILNNYVQFEVFHGPSDVASMS 1558
Query: 390 XXQTKINNGVWHRLTV 405
++++ +G WH L +
Sbjct: 1559 LSRSRVTDGEWHHLLI 1574
Score = 41 (19.5 bits), Expect = 2.6e-08, Sum P(3) = 2.6e-08
Identities = 6/14 (42%), Positives = 10/14 (71%)
Query: 47 CNKTPCEHGGKCIT 60
C + PCE+ KC++
Sbjct: 1102 CLREPCENYMKCVS 1115
Score = 41 (19.5 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 11/39 (28%), Positives = 21/39 (53%)
Query: 213 GVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAI 251
G PD+ +S + + SF+G + V+I N + +L +
Sbjct: 2393 GNPDFCWLSLRDTLIWSFVGPVGTVIIVNTVIFVLSAKV 2431
Score = 38 (18.4 bits), Expect = 2.6e-08, Sum P(3) = 2.6e-08
Identities = 10/23 (43%), Positives = 11/23 (47%)
Query: 262 PCITQPCGSGSCVPLYDGYKCVC 284
PC P GS S D +CVC
Sbjct: 1797 PCDCFPHGSHSRACDMDTGQCVC 1819
Score = 37 (18.1 bits), Expect = 2.4e-06, Sum P(3) = 2.4e-06
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 402 RLTVHRNFMVVMHG 415
++TVHR F M G
Sbjct: 1625 KVTVHRGFRGCMQG 1638
>UNIPROTKB|F1NW77 [details] [associations]
symbol:LOC430532 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007155 "cell adhesion" evidence=IEA]
InterPro:IPR000421 InterPro:IPR000742 PROSITE:PS50022
PROSITE:PS50026 SMART:SM00181 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025 Pfam:PF02210
GeneTree:ENSGT00560000076804 OMA:CMRLISI EMBL:AADN02077134
EMBL:AADN02077135 EMBL:AADN02077136 EMBL:AADN02077137
EMBL:AADN02077138 EMBL:AADN02077139 IPI:IPI00592296
Ensembl:ENSGALT00000018891 ArrayExpress:F1NW77 Uniprot:F1NW77
Length = 1142
Score = 171 (65.3 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 75/304 (24%), Positives = 127/304 (41%)
Query: 89 FNG-SSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRY-V 146
FN +SYL + L ++ + D++ FK G+ L N G+ DFI + L Y V
Sbjct: 649 FNTETSYLHFPTLHGEFST--DVSFFFKTTASAGMFLENL----GIQDFIRIELYSPYEV 702
Query: 147 DFTFDLGTGA--ATLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSP--GPFTQ 202
F+FD+G G ++S ++ +WH ++ R + A LQVD+ P +P G F +
Sbjct: 703 IFSFDVGNGPNEVKVQSLTFLNDNQWHYVKAERNIKEASLQVDKIPQKSHAAPPDGHF-R 761
Query: 203 XXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEA--IQGVNVVNCA 260
GG + F+GCI+ + +N L++ A GV C
Sbjct: 762 LQLNSQLFVGGTASR---------QKGFLGCIRSLQLNGIALDLEERAKITPGVEP-GCP 811
Query: 261 HPCITQP--CGSGS-CVPLYDGYKCVCTQSCKESHLTEV-MCASFDHGASFLHYLDPEII 316
C + C +G C Y G+ C CT S + + A F G S ++
Sbjct: 812 GHCSSYGNLCDNGGKCREKYSGFTCDCTFSAYAGPFCKKEISAYFGTGTSVIYSFQENYT 871
Query: 317 HSSGLLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGI-HNGYA 375
+ + + D + I +T+ + L+L+ SS K++L++ + NG
Sbjct: 872 FAKNSSSHASAFYADMTLN--RETITFAFRTTRTPSLLLYI-SSFYKEYLSVILSRNGSL 928
Query: 376 HVMY 379
+ Y
Sbjct: 929 QIRY 932
Score = 40 (19.1 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 24/109 (22%), Positives = 48/109 (44%)
Query: 417 SHTRSNKSSKIEFKCLS---IQ--RLHRTGKQCLIRIDTDYSMQSI-SGGKFEQLNTDSG 470
SH + S I FK ++ +Q ++ R + + ++ + M+ I S G + N
Sbjct: 936 SHQDPDVCS-INFKSMADGQLQHVKIDREREILFVEVNQNERMKFILSSGT--EFNAIRS 992
Query: 471 LYVGGV---EDIEELTRSKYHHSFKGWISNLILSNDYQVKLPLSRSQGS 516
L +G + D++E T F G +S++ ++ +K L S +
Sbjct: 993 LILGKILENSDVDEETMKANSQGFIGCLSSVQFNHISPLKAALQHSSSA 1041
>UNIPROTKB|F1RR92 [details] [associations]
symbol:SLIT3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070100 "negative regulation of chemokine-mediated
signaling pathway" evidence=IEA] [GO:0061364 "apoptotic process
involved in luteolysis" evidence=IEA] [GO:0051414 "response to
cortisol stimulus" evidence=IEA] [GO:0050919 "negative chemotaxis"
evidence=IEA] [GO:0048846 "axon extension involved in axon
guidance" evidence=IEA] [GO:0048495 "Roundabout binding"
evidence=IEA] [GO:0035385 "Roundabout signaling pathway"
evidence=IEA] [GO:0032870 "cellular response to hormone stimulus"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0010629 "negative regulation of gene expression"
evidence=IEA] [GO:0009887 "organ morphogenesis" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0008285
GO:GO:0005615 GO:GO:0030308 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887 PROSITE:PS01186
GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 GO:GO:0048846 GO:GO:0070100 Pfam:PF12661
Pfam:PF01463 GO:GO:0051414 GeneTree:ENSGT00700000104083
GO:GO:0050919 GO:GO:0035385 GO:GO:0061364 OMA:SVDCHGL EMBL:CU640426
Ensembl:ENSSSCT00000018524 Uniprot:F1RR92
Length = 1340
Score = 149 (57.5 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 60/245 (24%), Positives = 94/245 (38%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQFNGS-SYLRYQGLGEQYL 105
C++ C++G +CI C CP GF G C+ + + F G SY+ +
Sbjct: 940 CDQYECQNGAQCIVVQQEPTCRCPPGFAGPRCEKLITVN---FVGKDSYVELASAKVRPQ 996
Query: 106 SLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFD-LGTGAATLRSSNP 164
+ + L + + NGILLY G D +AL L +V +D L + T+ S
Sbjct: 997 ANISLQVATD--KDNGILLYKGDN-----DPLALELYQGHVRLVYDSLSSPPTTVYSVET 1049
Query: 165 ISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSP-- 222
++ G++H + L + L VD+ + GG+P +S
Sbjct: 1050 VNDGQFHSVELVMLNQTLNLVVDKGAPKSLGKLQKQPAVSINSPLYLGGIPTSTGLSALR 1109
Query: 223 --KVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNCAHPCITQPCGSGSCVPLY-DG 279
+ F GCI +V INN + Q + V C C G C + D
Sbjct: 1110 QGADRPLGGFHGCIHEVRINNELQDFKALPPQALGVSPGCKSCSV--CKHGLCRAVEKDS 1167
Query: 280 YKCVC 284
C C
Sbjct: 1168 VVCEC 1172
Score = 99 (39.9 bits), Expect = 3.0e-05, Sum P(3) = 3.0e-05
Identities = 18/55 (32%), Positives = 27/55 (49%)
Query: 36 KGRSKECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQFN 90
+G+ E D C CE+ C+ + C+CP +TG+LC +D VP N
Sbjct: 806 EGQRCEINPDDCEDNDCENNATCVDGINNYVCVCPPNYTGELCDEVIDHCVPGMN 860
Score = 92 (37.4 bits), Expect = 0.00016, Sum P(3) = 0.00016
Identities = 18/51 (35%), Positives = 25/51 (49%)
Query: 38 RSKECLE--DKCNKTPCEHGGKCITTPGSS---YCLCPLGFTGDLCQTRLD 83
+ K+C + C + PC+HGG C + C CPLGF G C+ D
Sbjct: 765 KGKDCTVPINTCIQNPCQHGGTCHLSESHQDGFSCSCPLGFEGQRCEINPD 815
Score = 74 (31.1 bits), Expect = 3.0e-05, Sum P(3) = 3.0e-05
Identities = 15/62 (24%), Positives = 31/62 (50%)
Query: 340 NIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGV 399
NI +++ T +G++L+ G + D LAL ++ G+ ++Y +N+G
Sbjct: 998 NISLQVATDKDNGILLYKGDN---DPLALELYQGHVRLVYDSLSSPPTTVYSVETVNDGQ 1054
Query: 400 WH 401
+H
Sbjct: 1055 FH 1056
Score = 63 (27.2 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 14/50 (28%), Positives = 20/50 (40%)
Query: 262 PCITQPCGSGSCVPLYDGYKCVCTQS-----CKESHLTEVMCASFD--HG 304
PC+ C G CV Y C C + C + + C++F HG
Sbjct: 1188 PCLGHSCNQGKCVASGTSYVCKCAEGYGGALCDHKNDSASACSAFKCHHG 1237
Score = 58 (25.5 bits), Expect = 3.0e-05, Sum P(3) = 3.0e-05
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 263 CITQPCGSGS-CVPLYDGYKCVCTQ 286
C C G+ CV +GY C+C Q
Sbjct: 895 CTAHRCRHGAQCVDAVNGYTCICPQ 919
>ZFIN|ZDB-GENE-050208-404 [details] [associations]
symbol:celsr2l "cadherin, EGF LAG seven-pass G-type
receptor 2, like" species:7955 "Danio rerio" [GO:0004888
"transmembrane signaling receptor activity" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0007218
"neuropeptide signaling pathway" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0004930 "G-protein coupled receptor
activity" evidence=IEA] [GO:0007166 "cell surface receptor
signaling pathway" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] InterPro:IPR000203
InterPro:IPR000742 InterPro:IPR000832 InterPro:IPR001879
InterPro:IPR001881 InterPro:IPR017981 Pfam:PF00002 Pfam:PF00008
Pfam:PF01825 PROSITE:PS50026 PROSITE:PS50221 PROSITE:PS50227
PROSITE:PS50261 SMART:SM00179 SMART:SM00181 SMART:SM00303
ZFIN:ZDB-GENE-050208-404 GO:GO:0016021 GO:GO:0005886 GO:GO:0004930
GO:GO:0007218 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 InterPro:IPR022624
Pfam:PF12003 GeneTree:ENSGT00700000104170 Pfam:PF02210
EMBL:AL645789 IPI:IPI00502412 Ensembl:ENSDART00000082453
Bgee:F1QT64 Uniprot:F1QT64
Length = 1478
Score = 160 (61.4 bits), Expect = 9.1e-08, P = 9.1e-08
Identities = 64/268 (23%), Positives = 106/268 (39%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQYLS 106
CN PC +GG C++ GS C C LGF G C+ + + + G L + L
Sbjct: 184 CNNNPCLNGGSCVSLWGSFRCDCALGFGGRNCEKVMSNPL-RLQGKGLLWWADLASVMTL 242
Query: 107 LLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSN-PI 165
+ +F+ +P ++ H + G + L + +V + G + R + +
Sbjct: 243 PWHMEFMFRTRQPTATVM---HMSSGQQHNFTIQLREGFVVTSVQRGEDSVVSRVDDVTV 299
Query: 166 SLGEWHKLRL-----TRTGRHAYLQVDR--FPSSQILSPGPFTQXXXXXXXXXGGVPDYN 218
S G+WH + L T G A L +D + SS L + GG+ D
Sbjct: 300 SDGQWHHVSLELKGPTTGGVTATLSLDYGLYTSSMDLDSK--LKGVRLKTLSVGGISD-- 355
Query: 219 IVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVN----CAHP--CITQPCGSGS 272
+ ++ F GCIQ + I ++ V+N C+ P C + PC + S
Sbjct: 356 ---GRNRVIGGFRGCIQGLRIGGDSSTPAFPSMPQARVLNVESGCSLPNTCGSNPCPAHS 412
Query: 273 -CVPLYDGYKCVCTQSCKESHLTEVMCA 299
C +D + C C + T+ CA
Sbjct: 413 DCKDDWDAHSCRCHTGYYGNSCTDA-CA 439
Score = 98 (39.6 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 23/60 (38%), Positives = 32/60 (53%)
Query: 114 FKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRS--SNPISLGEWH 171
F EPNG+LLYNG R + DFIA+ + ++ + TF G T+ +S G WH
Sbjct: 1 FATREPNGLLLYNG-RFNEKHDFIAMEIVNQQIQLTFSAGETKTTVSPFIKGGVSDGHWH 59
Score = 93 (37.8 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 39/198 (19%), Positives = 77/198 (38%)
Query: 212 GGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNCAHP---CITQPC 268
GGVP P V+ + FIGC++ + I+ +++ G + C+ C PC
Sbjct: 132 GGVPKLPEEFP-VQNRQ-FIGCMKDLRIDERHVDMAGFIANNGTLPGCSAKRNFCNNNPC 189
Query: 269 -GSGSCVPLYDGYKCVCTQSCKESHLTEVMCASFDHGASFLHYLDPEIIHSSGLLHYKFQ 327
GSCV L+ ++C C + +VM +P + GLL +
Sbjct: 190 LNGGSCVSLWGSFRCDCALGFGGRNCEKVMS-------------NPLRLQGKGLLWWADL 236
Query: 328 LHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXX 387
V +T ++++ +T + ++ S Q +F + + G+
Sbjct: 237 ASV---MT-LPWHMEFMFRTRQPTATVMHMSSGQQHNF-TIQLREGFVVTSVQRGEDSVV 291
Query: 388 XXXXQTKINNGVWHRLTV 405
+++G WH +++
Sbjct: 292 SRVDDVTVSDGQWHHVSL 309
>FB|FBgn0002526 [details] [associations]
symbol:LanA "Laminin A" species:7227 "Drosophila
melanogaster" [GO:0005604 "basement membrane" evidence=ISS;NAS;IDA]
[GO:0007417 "central nervous system development" evidence=NAS]
[GO:0007422 "peripheral nervous system development" evidence=NAS]
[GO:0005605 "basal lamina" evidence=IDA] [GO:0035001 "dorsal trunk
growth, open tracheal system" evidence=IMP] [GO:0007507 "heart
development" evidence=IMP] [GO:0009887 "organ morphogenesis"
evidence=NAS] [GO:0009888 "tissue development" evidence=NAS]
[GO:0048598 "embryonic morphogenesis" evidence=NAS] [GO:0016321
"female meiosis chromosome segregation" evidence=IMP] [GO:0007498
"mesoderm development" evidence=IEP] [GO:0007411 "axon guidance"
evidence=IMP] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0005606 "laminin-1 complex" evidence=IEA]
[GO:0045995 "regulation of embryonic development" evidence=IEA]
[GO:0005102 "receptor binding" evidence=IEA] [GO:0001964 "startle
response" evidence=IMP] [GO:0031987 "locomotion involved in
locomotory behavior" evidence=IMP] [GO:0048854 "brain
morphogenesis" evidence=IMP] [GO:0002121 "inter-male aggressive
behavior" evidence=IMP] [GO:0007476 "imaginal disc-derived wing
morphogenesis" evidence=IMP] [GO:0035011 "melanotic encapsulation
of foreign target" evidence=IMP] [GO:0036062 "presynaptic
periactive zone" evidence=IDA] [GO:0045886 "negative regulation of
synaptic growth at neuromuscular junction" evidence=IMP]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
GO:GO:0007411 GO:GO:0007507 EMBL:AE014296 GO:GO:0030155
GO:GO:0007498 GO:GO:0007155 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0005605 GO:GO:0002121
PROSITE:PS01186 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 GO:GO:0007476 GO:GO:0016321 GO:GO:0048854
Pfam:PF02210 GO:GO:0031987 GO:GO:0001964 GO:GO:0045995
GO:GO:0035011 eggNOG:NOG292643 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0035001 GO:GO:0005606 KO:K06240 EMBL:M96388 EMBL:L07288
EMBL:M75882 PIR:S28399 RefSeq:NP_476617.1 UniGene:Dm.865
ProteinModelPortal:Q00174 SMR:Q00174 MINT:MINT-754541 STRING:Q00174
PaxDb:Q00174 PRIDE:Q00174 GeneID:38723 KEGG:dme:Dmel_CG10236
CTD:38723 FlyBase:FBgn0002526 InParanoid:Q00174 OrthoDB:EOG4KKWHR
ChiTaRS:LanA GenomeRNAi:38723 NextBio:810058 Bgee:Q00174
GermOnline:CG10236 Uniprot:Q00174
Length = 3712
Score = 119 (46.9 bits), Expect = 0.00098, Sum P(3) = 0.00098
Identities = 37/113 (32%), Positives = 57/113 (50%)
Query: 89 FNGSSYLRYQGLGEQYLSLL----------DLTIVFKAIEPNGILLYNGHRADGVGDFIA 138
F + Y R+ GL EQ L + D+ I F+ PNG+L+Y G + DFIA
Sbjct: 3345 FTEAGY-RFYGLREQRLQINSLPVKVRRHHDIGISFRTERPNGLLIYAGSKQRD--DFIA 3401
Query: 139 LYLNDRYVDFTFDLGTGA---ATLRSSNPISLGEWHKLRLTRTGRHAYLQVDR 188
+YL D V T+++ GA A + + ++ G WH + + RT R L +D+
Sbjct: 3402 VYLLDGRV--TYEIRVGAQLQAKITTEAELNDGTWHTVEVVRTQRKVSLLIDK 3452
Score = 116 (45.9 bits), Expect = 9.8e-08, Sum P(4) = 9.8e-08
Identities = 27/91 (29%), Positives = 48/91 (52%)
Query: 109 DLTIVFKAIEPNGILLYNGH---RADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSNPI 165
+L+ F+ EP+G LLY G+ A DF+A+ + + Y T DLG G + S +
Sbjct: 2699 NLSTYFRTTEPSGFLLYLGNDNKTAQKNNDFVAVEIVNGYPILTIDLGNGPERITSDKYV 2758
Query: 166 SLGEWHKLRLTRTGRHAYLQV-DRFPSSQIL 195
+ G W++ + R G +A L + + P+ ++
Sbjct: 2759 ADGRWYQAVVDRMGPNAKLTIREELPNGDVV 2789
Score = 110 (43.8 bits), Expect = 4.1e-07, Sum P(4) = 4.1e-07
Identities = 45/174 (25%), Positives = 70/174 (40%)
Query: 108 LDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSNPISL 167
L + + FK +PNG+L Y + I L L D + G+ + ++
Sbjct: 3077 LHVVLHFKTTQPNGVLFYAANHDQS--STIGLSLQDGLLKLN---SMGSQLVIDDRILND 3131
Query: 168 GEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSPKVKIK 227
GE H + + T L VD + ++ SP P G+PD N +P+ +
Sbjct: 3132 GEDHVVTVQHTQGELRLTVDDVDNKRLGSPQPLI--LEGGDIFFAGLPD-NYRTPRNALA 3188
Query: 228 SS--FIGCIQKVLINNHELNILGEAIQ-GVNVVNCA-HPCITQPCGSGSCVPLY 277
S F+GCI V +N +N A + N+ C H +P S VP Y
Sbjct: 3189 SLAYFVGCISDVTVNEEIINFANSAEKKNGNINGCPPHVLAYEP----SLVPSY 3238
Score = 107 (42.7 bits), Expect = 8.4e-07, Sum P(4) = 8.4e-07
Identities = 41/173 (23%), Positives = 74/173 (42%)
Query: 88 QFNGSSYLRYQGLGEQYLSLLDLTIVFKAIEP--NGILLYNGHRADGVGDFIALYLNDRY 145
+F G+ Y++ S + FKA + NG+L + G ++++ + D
Sbjct: 2880 RFKGNGYVQLNATSN-LKSRSSIQFSFKADKDTSNGLLFFYGRDKH----YMSIEMIDGA 2934
Query: 146 VDFTFDLGTGAATLRSSNP-ISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSP-GPFTQX 203
+ F LG G S + +WHK++ R R+ L+VD S+ +P +
Sbjct: 2935 IFFNISLGEGGGVQSGSQDRYNDNQWHKVQAERENRNGLLKVDDIVISRTNAPLEADLEL 2994
Query: 204 XXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNV 256
GG P ++ + ++ +F GCI V+IN ++ L E + G V
Sbjct: 2995 PKLRRLYFGGHP--RRLNTSISLQPNFDGCIDNVVINQGVVD-LTEYVTGGGV 3044
Score = 89 (36.4 bits), Expect = 9.8e-08, Sum P(4) = 9.8e-08
Identities = 20/89 (22%), Positives = 43/89 (48%)
Query: 320 GLLHYKFQLH-VDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVM 378
GL + Q++ + ++ + +I + +T +GL+++ GS Q DF+A+ + +G
Sbjct: 3354 GLREQRLQINSLPVKVRRHH-DIGISFRTERPNGLLIYAGSKQRDDFIAVYLLDGRVTYE 3412
Query: 379 YXXXXXXXXXXXXQTKINNGVWHRLTVHR 407
+ ++N+G WH + V R
Sbjct: 3413 IRVGAQLQAKITTEAELNDGTWHTVEVVR 3441
Score = 70 (29.7 bits), Expect = 3.5e-06, Sum P(3) = 3.5e-06
Identities = 29/140 (20%), Positives = 64/140 (45%)
Query: 349 SSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGVWHRLTV--- 405
+S+GL+ + G + K ++++ + +G Q + N+ WH++
Sbjct: 2911 TSNGLLFFYG--RDKHYMSIEMIDGAIFFNISLGEGGGVQSGSQDRYNDNQWHKVQAERE 2968
Query: 406 HRNFMVVMHGSSHTRSNKSSKIEFKCLSIQRLHRTGKQCLIRIDTDYSMQSISGGKFEQL 465
+RN ++ + +R+N + + + ++RL+ G R++T S+Q G + +
Sbjct: 2969 NRNGLLKVDDIVISRTNAPLEADLELPKLRRLYFGGHPR--RLNTSISLQPNFDGCIDNV 3026
Query: 466 NTDSGL-----YV--GGVED 478
+ G+ YV GGVE+
Sbjct: 3027 VINQGVVDLTEYVTGGGVEE 3046
Score = 67 (28.6 bits), Expect = 9.8e-08, Sum P(4) = 9.8e-08
Identities = 12/33 (36%), Positives = 15/33 (45%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQ 79
C C + C T G C+CP GDLC+
Sbjct: 1418 CKPCKCPNSAMCEPTTGE--CMCPPNVIGDLCE 1448
Score = 52 (23.4 bits), Expect = 2.8e-06, Sum P(4) = 2.8e-06
Identities = 14/39 (35%), Positives = 16/39 (41%)
Query: 41 ECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQ 79
EC +CNK C T G C C F GD C+
Sbjct: 491 ECKACECNKIG-SITNDCNVTTGE--CKCLTNFGGDNCE 526
Score = 52 (23.4 bits), Expect = 2.8e-06, Sum P(4) = 2.8e-06
Identities = 11/40 (27%), Positives = 17/40 (42%)
Query: 41 ECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQT 80
+CL C+ HG + ++ CLC F G C +
Sbjct: 628 DCLPCHCDS----HGSQGVSCNSDGQCLCQPNFDGRQCDS 663
Score = 51 (23.0 bits), Expect = 3.5e-06, Sum P(4) = 3.5e-06
Identities = 15/54 (27%), Positives = 23/54 (42%)
Query: 32 GNKIKGRSKECLEDKCNKTPCEHGG---KC-ITTPGSS-YCLCPLGFTGDLCQT 80
GN G +C+ C P + C I+ G +C C G+TG C++
Sbjct: 1846 GNATNGTPGDCMICAC-PLPFDSNNFATSCEISESGDQIHCECKPGYTGPRCES 1898
Score = 50 (22.7 bits), Expect = 4.4e-06, Sum P(4) = 4.4e-06
Identities = 12/38 (31%), Positives = 16/38 (42%)
Query: 42 CLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQ 79
C E +CN +G C G C C + F G C+
Sbjct: 445 CRECECNLNGT-NGYHCEAESGQQ-CPCKINFAGAYCK 480
Score = 49 (22.3 bits), Expect = 2.3e-05, Sum P(4) = 2.3e-05
Identities = 12/45 (26%), Positives = 22/45 (48%)
Query: 5 DNQVILDDWNTVRVFRHRWDAWIQLNDGNKIKGRSKECLEDKCNK 49
+ V+L+ V R + + ++QLN + +K RS K +K
Sbjct: 2865 ERDVLLEKKKPVTGLRFKGNGYVQLNATSNLKSRSSIQFSFKADK 2909
Score = 47 (21.6 bits), Expect = 8.5e-06, Sum P(4) = 8.5e-06
Identities = 11/34 (32%), Positives = 15/34 (44%)
Query: 47 CNKTPCEHGG--KCITTPGSSYCLCPLGFTGDLC 78
C+ C++ G I S C+C GF G C
Sbjct: 538 CSYCDCDNQGTESEICNKQSGQCICREGFGGPRC 571
Score = 45 (20.9 bits), Expect = 1.3e-05, Sum P(4) = 1.3e-05
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 52 CEHGGKCITT---PGSSYCLCPLGFTGDLC 78
C+ G +T P + +C C G TG C
Sbjct: 2017 CDCGAASNSTQCDPHTGHCACKSGVTGRQC 2046
Score = 45 (20.9 bits), Expect = 1.3e-05, Sum P(4) = 1.3e-05
Identities = 12/37 (32%), Positives = 14/37 (37%)
Query: 42 CLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLC 78
C CN+ G C P + C C G GD C
Sbjct: 2061 CTPCNCNQG-YSRGFGC--NPNTGKCQCLPGVIGDRC 2094
Score = 44 (20.5 bits), Expect = 1.7e-05, Sum P(4) = 1.7e-05
Identities = 6/13 (46%), Positives = 9/13 (69%)
Query: 67 CLCPLGFTGDLCQ 79
C CP G++G C+
Sbjct: 1776 CSCPPGYSGHSCE 1788
Score = 44 (20.5 bits), Expect = 1.7e-05, Sum P(4) = 1.7e-05
Identities = 11/38 (28%), Positives = 14/38 (36%)
Query: 41 ECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLC 78
+C C+ T G IT + C C F G C
Sbjct: 583 DCKPCNCSST----GSSAITCDNTGKCNCLNNFAGKQC 616
Score = 42 (19.8 bits), Expect = 9.8e-08, Sum P(4) = 9.8e-08
Identities = 19/79 (24%), Positives = 33/79 (41%)
Query: 422 NKSSKIEFKCLSIQRLHRTGKQCLIRIDTDYSMQSISGGKFEQL--NTDSGLYVGGVEDI 479
N S + K ++Q + + +I I D+ + G + T+ L++GG
Sbjct: 3611 NNESFCDGKTRNVQAIK---SKFVINIAVDFISSNPGVGNEGSVITRTNRPLFLGGHVAF 3667
Query: 480 EELTRSKYHHSFKGWISNL 498
+ K SFKG IS +
Sbjct: 3668 QRAPGIKTKKSFKGCISKV 3686
Score = 42 (19.8 bits), Expect = 2.6e-05, Sum P(4) = 2.6e-05
Identities = 9/32 (28%), Positives = 10/32 (31%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCPLGFTGDLC 78
C C+ G P C C GD C
Sbjct: 1967 CQSCDCDDLGTQTCDPFVGVCTCHENVIGDRC 1998
Score = 41 (19.5 bits), Expect = 3.2e-05, Sum P(4) = 3.2e-05
Identities = 12/38 (31%), Positives = 15/38 (39%)
Query: 44 EDKCNKTPC---EHGGKCITTPGSSYCLCPLGFTGDLC 78
ED CN P + C + P C C TG +C
Sbjct: 675 ED-CNCDPAGVIDKFAGCGSVPVGELCKCKERVTGRIC 711
Score = 39 (18.8 bits), Expect = 5.0e-05, Sum P(4) = 5.0e-05
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 57 KCITTPGSSYC-LCPLGFTGD 76
+C+ + C LC GF GD
Sbjct: 1940 RCLNNTFGAACNLCAPGFYGD 1960
>ZFIN|ZDB-GENE-060610-1 [details] [associations]
symbol:crb2b "crumbs homolog 2b" species:7955 "Danio
rerio" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0003094
"glomerular filtration" evidence=IMP] [GO:0032835 "glomerulus
development" evidence=IMP] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0042462 "eye photoreceptor cell development"
evidence=IMP] [GO:0048793 "pronephros development" evidence=IMP]
[GO:0043234 "protein complex" evidence=IPI] InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
ZFIN:ZDB-GENE-060610-1 GO:GO:0043234 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 eggNOG:NOG12793 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 GO:GO:0042384 GO:GO:0032835
GO:GO:0003094 Pfam:PF02210 GO:GO:0048793 GO:GO:0042462 Pfam:PF12661
KO:K16681 HOVERGEN:HBG080001 HOGENOM:HOG000230899 EMBL:DQ314737
IPI:IPI00485830 RefSeq:NP_001038627.1 UniGene:Dr.93336
ProteinModelPortal:Q1A5L1 GeneID:568520 KEGG:dre:568520 CTD:568520
InParanoid:Q1A5L1 NextBio:20889215 Uniprot:Q1A5L1
Length = 1458
Score = 139 (54.0 bits), Expect = 8.6e-07, Sum P(2) = 8.6e-07
Identities = 70/282 (24%), Positives = 115/282 (40%)
Query: 26 WIQLNDGNKIKGRSKECLEDK-CNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRL-- 82
++ N N ++G C+ D+ C PC +GGKC CLCPL F+G C+TR+
Sbjct: 939 YLPRNSSNVLEG----CVGDQTCKMKPCLNGGKCQVIWNDFMCLCPLNFSGKTCETRVWC 994
Query: 83 --D--------LQVPQ-----FNGS---SYLRYQGLGEQYLSLLDLTIVFKAIEPNGILL 124
D + +P N + + L++ G + ++ +++ + E NG +L
Sbjct: 995 VSDPCDPRTRCVDLPDGYECLANATFENNALKFSANGSFFEPVMRISMDLRTREENGTIL 1054
Query: 125 YNGHRADGVGDFIALYLNDRY-VDFTFDLGTGAATLRSSNPISLGEWHKLRLTRTGRHAY 183
+ ++G+ F LN V F S +S GEWHK+ L +
Sbjct: 1055 RS---SNGIEFFCMGLLNSSIIVKFRDSNSLEVHAFISDVTVSDGEWHKVELYASSSR-- 1109
Query: 184 LQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHE 243
+ R+ S +P F+ G V +N S V + ++ GC+ +V I
Sbjct: 1110 ISAFRWHMSIDGNPAGFS------LSPAGNVDFFN--SSTVMLAENYTGCLGEVRIGGVH 1161
Query: 244 LNILG----EA---IQGVNVVNCAHP---CITQP-CGSGSCV 274
L+ G EA Q + + P CI P C S C+
Sbjct: 1162 LSFFGPLNEEAPQKTQFIRIGGMLEPHLGCIGSPLCLSEPCL 1203
Score = 108 (43.1 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 17/39 (43%), Positives = 23/39 (58%)
Query: 45 DKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLD 83
++C PCE+GG C + C CP GF G +C+T LD
Sbjct: 436 NECESAPCENGGSCEDLVNAFQCSCPPGFAGAVCETELD 474
Score = 103 (41.3 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 76/386 (19%), Positives = 152/386 (39%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCPLGFTGDLC-QTRLDLQVPQFNGSSYLRYQGLGEQYL 105
C PC G+C+ + C+C + G+ C + S+ + + + +
Sbjct: 740 CRVNPCSDHGRCVDLWSNYTCVCHRPYYGEHCSEEHTSWTFSHERNRSFAAFP-IMQNHS 798
Query: 106 SLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSNPI 165
+ +++ ++ NG++L H D ++ L+L + + + ++ R+S+ +
Sbjct: 799 RDVTVSLWLRSRHLNGLVLQLQH--DNQ-PYLTLFLKNG----SLYISIYSSIRRASDFL 851
Query: 166 SLGEWHKLRL-TRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSPKV 224
+ GE + + T G + Q R P ++ G F + GG+P+
Sbjct: 852 TNGEKLFMSIKTEPGVILFNQTQRIP---MIYSG-F-EVQVGDVVYLGGLPEGE---NSA 903
Query: 225 KIKSSFIGCIQKVLINNHELNILGEAIQ------------GVNVVN-CA--HPCITQPC- 268
F GC+Q V I++ +L + +I NV+ C C +PC
Sbjct: 904 LWGGYFKGCLQDVRIDDTQLFMYSGSISQKPQHANYLPRNSSNVLEGCVGDQTCKMKPCL 963
Query: 269 GSGSCVPLYDGYKCVCTQSCK-ESHLTEVMCASFDHGASFLHYLD-PEIIHSSGLLHYKF 326
G C +++ + C+C + ++ T V C S D +D P+ L + F
Sbjct: 964 NGGKCQVIWNDFMCLCPLNFSGKTCETRVWCVS-DPCDPRTRCVDLPDGYEC--LANATF 1020
Query: 327 QLH-VDFRITGYEFN----IDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXX 381
+ + + F G F I M ++T +G IL SS +F +G+ N V +
Sbjct: 1021 ENNALKFSANGSFFEPVMRISMDLRTREENGTIL--RSSNGIEFFCMGLLNSSIIVKFRD 1078
Query: 382 XXXXXXXXX-XQTKINNGVWHRLTVH 406
+++G WH++ ++
Sbjct: 1079 SNSLEVHAFISDVTVSDGEWHKVELY 1104
Score = 89 (36.4 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 21/49 (42%), Positives = 27/49 (55%)
Query: 37 GRSKECLEDKCNKTPCEHGGKCITTPGS-SY-CLCPLGFTGDLCQTRLD 83
G + E L D C+ C CI TPGS +Y CLCP GF+G C ++
Sbjct: 64 GPNCERLLDPCDSAGCP--STCIATPGSQNYTCLCPDGFSGPNCTQNIN 110
Score = 82 (33.9 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 14/39 (35%), Positives = 20/39 (51%)
Query: 45 DKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLD 83
++C PCE+ G C+ C C GFTG C+ +D
Sbjct: 225 NECASQPCENNGTCVNGRDRYICECLFGFTGLNCEVDVD 263
Score = 77 (32.2 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 16/44 (36%), Positives = 20/44 (45%)
Query: 38 RSKECLED--KCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQ 79
R + C ED +C PC +G C G C C GF G C+
Sbjct: 178 RGRNCEEDIDECLSQPCRNGAICQDAVGVYQCYCVPGFQGFHCE 221
Score = 74 (31.1 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 45 DKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLD 83
D+C +PC++G C G C C G+ G C+ +D
Sbjct: 263 DECEASPCQNGAVCHDHVGLYTCECVPGYEGINCELDID 301
Score = 62 (26.9 bits), Expect = 8.6e-07, Sum P(2) = 8.6e-07
Identities = 11/22 (50%), Positives = 12/22 (54%)
Query: 263 CITQPCGSGSCVPLYDGYKCVC 284
C QPC GSC L Y+C C
Sbjct: 1235 CGEQPCVQGSCQDLLGDYECRC 1256
Score = 60 (26.2 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 263 CITQPC-GSGSCVPLYDGYKCVC 284
C+++PC GSCV ++ Y C C
Sbjct: 1351 CVSEPCLNGGSCVNRHNLYFCEC 1373
Score = 58 (25.5 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 11/23 (47%), Positives = 11/23 (47%)
Query: 263 CITQPC-GSGSCVPLYDGYKCVC 284
C C GSCV GY CVC
Sbjct: 1272 CKDHQCENGGSCVATVSGYTCVC 1294
>UNIPROTKB|H7C3D6 [details] [associations]
symbol:NRXN2 "Neurexin-2" species:9606 "Homo sapiens"
[GO:0007269 "neurotransmitter secretion" evidence=IEA] [GO:0007416
"synapse assembly" evidence=IEA] InterPro:IPR027160
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025
Pfam:PF02210 EMBL:AP001462 HGNC:HGNC:8009 ChiTaRS:NRXN2
PANTHER:PTHR10127:SF307 EMBL:AP001092 ProteinModelPortal:H7C3D6
SMR:H7C3D6 Ensembl:ENST00000417749 Uniprot:H7C3D6
Length = 206
Score = 141 (54.7 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 45/178 (25%), Positives = 81/178 (45%)
Query: 72 GFTGDLCQTRLDLQ--VPQFNGSSYLRYQGLGEQYLSLLD-LTIVFKAIEPNGILLYNGH 128
G GD+ Q + V F G+ + Y S D +T+ F+ ++ NG++L+ G
Sbjct: 34 GGAGDVHQPTKGKEEFVATFKGNEFFCYDLSHNPIQSSTDEITLAFRTLQRNGLMLHTGK 93
Query: 129 RADGVGDFIALYLNDRYVDFTFDLGTGA--ATLRSSN-PISLGEWHKLRLTRTGRHAYLQ 185
AD ++ L L V +LG+GA A + N + WH +R+TR R +
Sbjct: 94 SAD----YVNLSLKSGAVWLVINLGSGAFEALVEPVNGKFNDNAWHDVRVTRNLRQVTIS 149
Query: 186 VDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHE 243
VD ++ + +T GG P+ + P + ++F+GC++ V+ N++
Sbjct: 150 VDGILTTTGYTQEDYTMLGSDDFFYIGGSPNTADL-PGSPVSNNFMGCLKDVVYKNND 206
>ZFIN|ZDB-GENE-060119-1 [details] [associations]
symbol:lama2 "laminin, alpha 2" species:7955 "Danio
rerio" [GO:0030155 "regulation of cell adhesion" evidence=IEA]
[GO:0005102 "receptor binding" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0005604 "basement membrane" evidence=IEA]
[GO:0045995 "regulation of embryonic development" evidence=IEA]
[GO:0005606 "laminin-1 complex" evidence=IEA] [GO:0007517 "muscle
organ development" evidence=IMP] [GO:0060538 "skeletal muscle organ
development" evidence=IMP] [GO:0016203 "muscle attachment"
evidence=IGI;IMP] InterPro:IPR009254 InterPro:IPR010307
Pfam:PF06008 Pfam:PF06009 ZFIN:ZDB-GENE-060119-1 GO:GO:0030155
GO:GO:0007155 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0016203 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606
EMBL:JN786913 Uniprot:G8IHT9
Length = 3124
Score = 111 (44.1 bits), Expect = 1.3e-07, Sum P(4) = 1.3e-07
Identities = 36/167 (21%), Positives = 74/167 (44%)
Query: 88 QFNGSSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVD 147
QF+G Y ++ + F+ + +++Y + + DF++ L+D V
Sbjct: 2316 QFDGDGYASVSRPTRWNPNVSTVMFKFRTFSTHSVIMYFATK--DMKDFMSAELSDGRVK 2373
Query: 148 FTFDLGTGAATLRSSNPISLGEWHKLRLTRTGRHAYLQV---DRFPSSQIL--SPGPFT- 201
++DLG+G ++ S + G+W ++R + A + + D + ++L SPG T
Sbjct: 2374 VSYDLGSGTGSIISDKRYNDGKWKSFTMSRMKKEATITIVNMDTNENERLLMASPGGATG 2433
Query: 202 -QXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNIL 247
GG+P +V +K F GC++ + ++ N+L
Sbjct: 2434 LNLRDNERIFFGGLPKAGKYRSEVVLKR-FSGCMKDIEVSRTPYNLL 2479
Score = 110 (43.8 bits), Expect = 0.00013, Sum P(4) = 0.00013
Identities = 38/173 (21%), Positives = 75/173 (43%)
Query: 92 SSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFD 151
+S++ ++ + ++ L + + +G++ Y R + DF + L + +FD
Sbjct: 2773 NSHMSFEFDDRKVMNRLVIEFEMRTETDSGLVFYMA-RINHA-DFATIQLKEGMAHLSFD 2830
Query: 152 LGTGAATLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXX 211
LG+G ++ I+ G+WHK+R+ R + L +D S SP
Sbjct: 2831 LGSGNTSVSVPRIINDGQWHKIRVMRDKQRGVLTIDGRYSKHTTSPKKAEILDVVGMLYV 2890
Query: 212 GGVPDYNIVSPKV-KIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNC-AHP 262
GG+P N + ++ + S CI+ + N L+ + V +C A+P
Sbjct: 2891 GGLP-LNYTTKRIGPVLYSIDACIRNFKMMNLPLD-MENPTSSYRVGSCFANP 2941
Score = 98 (39.6 bits), Expect = 1.3e-07, Sum P(4) = 1.3e-07
Identities = 28/110 (25%), Positives = 49/110 (44%)
Query: 323 HYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXX 382
H F+ D R I+ ++T + SGL+ + DF + + G AH+ +
Sbjct: 2775 HMSFEF--DDRKVMNRLVIEFEMRTETDSGLVFYMARINHADFATIQLKEGMAHLSFDLG 2832
Query: 383 XXXXXXXXXQTKINNGVWHRLTVHRNF---MVVMHG--SSHTRSNKSSKI 427
+ IN+G WH++ V R+ ++ + G S HT S K ++I
Sbjct: 2833 SGNTSVSVPRI-INDGQWHKIRVMRDKQRGVLTIDGRYSKHTTSPKKAEI 2881
Score = 83 (34.3 bits), Expect = 8.3e-05, Sum P(4) = 8.3e-05
Identities = 23/79 (29%), Positives = 42/79 (53%)
Query: 111 TIVF--KAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSNPI-SL 167
TI+ K + + +L Y G A V DF+A+ + V+F +D+G+G + + I +
Sbjct: 2143 TIILHLKTLAADNLLFYLGS-AKYV-DFLAIEMRKGKVNFLWDVGSGVGRVEYPDLIIND 2200
Query: 168 GEWHKLRLTRTGRHAYLQV 186
G WH++ +R G + + V
Sbjct: 2201 GNWHRIEASRIGLNGSISV 2219
Score = 68 (29.0 bits), Expect = 0.00011, Sum P(4) = 0.00011
Identities = 19/79 (24%), Positives = 38/79 (48%)
Query: 332 FRITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNG--YAHVMYXXXXXXXXXX 389
+R+ G + ++D+ +T+ SS +++ SSQ D L + + NG + H
Sbjct: 2959 YRV-GNDVSVDLEFRTAQSSAVLVGV-SSQKMDGLGIELVNGKLFFHADNGVGRFTAVHE 3016
Query: 390 XXQTK-INNGVWHRLTVHR 407
Q + +G WH ++ H+
Sbjct: 3017 PRQEAGLCDGQWHTVSAHK 3035
Score = 59 (25.8 bits), Expect = 1.3e-07, Sum P(4) = 1.3e-07
Identities = 12/36 (33%), Positives = 15/36 (41%)
Query: 44 EDKCNKTPCEH-GGKCITTPGSSYCLCPLGFTGDLC 78
E C C H G C + G C+CP G+ C
Sbjct: 992 EGGCTPCQCAHVGNNCDASTGQ--CICPPNTVGERC 1025
Score = 59 (25.8 bits), Expect = 1.3e-07, Sum P(4) = 1.3e-07
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 31 DGNKIKGRSKECLEDKCNKTP--CE-HGGKCITTPGSSYCLC 69
D + GR +EC D P C+ H G+C PG+S C
Sbjct: 1493 DPGVLGGRCEECKCDPYGAFPSACDSHSGQCQCRPGASGLKC 1534
Score = 50 (22.7 bits), Expect = 1.0e-06, Sum P(4) = 1.0e-06
Identities = 14/47 (29%), Positives = 19/47 (40%)
Query: 32 GNKIKGRSKECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLC 78
G+ ++G + C+ CN G K S C C G TG C
Sbjct: 939 GSHLQG-ALGCVPCHCNS----FGSKSFDCDESGQCRCQPGVTGQKC 980
Score = 48 (22.0 bits), Expect = 1.6e-06, Sum P(4) = 1.6e-06
Identities = 14/51 (27%), Positives = 22/51 (43%)
Query: 32 GNKIKGRSKECLEDKCNK-TPCEH-GGKC-ITTPGSSYC-LCPLGFTGDLC 78
G+ +G + +C C +P + C + G C CP G+TG C
Sbjct: 779 GDATRGTADDCQPCACPLLSPANNFSPTCRVDGRGEVICDRCPPGYTGSRC 829
Score = 47 (21.6 bits), Expect = 2.0e-06, Sum P(4) = 2.0e-06
Identities = 13/36 (36%), Positives = 18/36 (50%)
Query: 67 CLCPLGFTGDLCQTRLDLQVPQFNGSSYLRYQGLGE 102
C CP G+ G C+ L + NG+ Y QG+ E
Sbjct: 709 CQCPPGYDGTSCEM-CALGYRRVNGTIY---QGVCE 740
Score = 44 (20.5 bits), Expect = 3.8e-06, Sum P(4) = 3.8e-06
Identities = 6/13 (46%), Positives = 9/13 (69%)
Query: 67 CLCPLGFTGDLCQ 79
C+CP G+ G C+
Sbjct: 1357 CVCPQGYAGLSCE 1369
Score = 44 (20.5 bits), Expect = 3.8e-06, Sum P(4) = 3.8e-06
Identities = 12/37 (32%), Positives = 15/37 (40%)
Query: 42 CLEDKCNKTPCEHGGKCITTPG--SSYC-LCPLGFTG 75
C+ D+ T G CI PG C C G+ G
Sbjct: 411 CVPDESQATTDLPVGSCICKPGYAGERCDRCVFGYAG 447
Score = 42 (19.8 bits), Expect = 1.3e-07, Sum P(4) = 1.3e-07
Identities = 15/65 (23%), Positives = 31/65 (47%)
Query: 438 HRTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGV-EDIEELTRSKYHHSFKGWIS 496
H+ + + +D S + + +T+ LYVGG E +++ + + FKG +
Sbjct: 3034 HKLKHRLELTVDGQKSEAASPDIRSPSADTNDPLYVGGYPEGLKQFGLT-INTPFKGCMR 3092
Query: 497 NLILS 501
N+ +S
Sbjct: 3093 NVKIS 3097
Score = 42 (19.8 bits), Expect = 6.0e-06, Sum P(4) = 6.0e-06
Identities = 10/45 (22%), Positives = 16/45 (35%)
Query: 41 ECLEDKCNKT-----PCE-HGGKCITTPGSSYCLCPLGFTGDLCQ 79
+C+ +C+ C+ G C S C C G C+
Sbjct: 1086 QCISCQCSAAGSSLDTCDSESGLCACADRSGQCSCKANVEGQKCE 1130
Score = 40 (19.1 bits), Expect = 9.3e-06, Sum P(4) = 9.3e-06
Identities = 5/12 (41%), Positives = 8/12 (66%)
Query: 67 CLCPLGFTGDLC 78
C+C G+ G+ C
Sbjct: 427 CICKPGYAGERC 438
Score = 40 (19.1 bits), Expect = 9.3e-06, Sum P(4) = 9.3e-06
Identities = 13/49 (26%), Positives = 21/49 (42%)
Query: 35 IKGRSKECLEDKCNKTPCEHGGK--CITTPGSSY-CL-CPLGFTGDLCQ 79
++G + +C C E+ C T + Y C CP G+ G C+
Sbjct: 1436 VRGFTDDCKPCACPLLNPENNFSPTCQTEGFNEYRCTACPEGYEGKHCE 1484
>FB|FBgn0259685 [details] [associations]
symbol:crb "crumbs" species:7227 "Drosophila melanogaster"
[GO:0007163 "establishment or maintenance of cell polarity"
evidence=NAS;IMP] [GO:0005886 "plasma membrane" evidence=ISS;IDA]
[GO:0016324 "apical plasma membrane" evidence=NAS;IDA;TAS]
[GO:0045198 "establishment of epithelial cell apical/basal
polarity" evidence=TAS] [GO:0016021 "integral to membrane"
evidence=NAS;TAS] [GO:0048477 "oogenesis" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=NAS;TAS] [GO:0045197
"establishment or maintenance of epithelial cell apical/basal
polarity" evidence=NAS;TAS] [GO:0016334 "establishment or
maintenance of polarity of follicular epithelium" evidence=IMP]
[GO:0042052 "rhabdomere development" evidence=NAS;IMP] [GO:0045186
"zonula adherens assembly" evidence=IMP;TAS] [GO:0016332
"establishment or maintenance of polarity of embryonic epithelium"
evidence=IMP] [GO:0016327 "apicolateral plasma membrane"
evidence=IDA;IPI] [GO:0005913 "cell-cell adherens junction"
evidence=NAS] [GO:0007043 "cell-cell junction assembly"
evidence=NAS] [GO:0046664 "dorsal closure, amnioserosa morphology
change" evidence=IMP] [GO:0045218 "zonula adherens maintenance"
evidence=NAS;IMP] [GO:0042051 "compound eye photoreceptor
development" evidence=IMP;TAS] [GO:0045494 "photoreceptor cell
maintenance" evidence=NAS;IMP] [GO:0016044 "cellular membrane
organization" evidence=IMP;TAS] [GO:0007435 "salivary gland
morphogenesis" evidence=IMP] [GO:0035239 "tube morphogenesis"
evidence=IMP] [GO:0030507 "spectrin binding" evidence=TAS]
[GO:0035003 "subapical complex" evidence=TAS] [GO:0005918 "septate
junction" evidence=TAS] [GO:0007431 "salivary gland development"
evidence=TAS] [GO:0008104 "protein localization" evidence=TAS]
[GO:0001738 "morphogenesis of a polarized epithelium" evidence=TAS]
[GO:0034332 "adherens junction organization" evidence=IMP]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005080
"protein kinase C binding" evidence=IPI] [GO:0045746 "negative
regulation of Notch signaling pathway" evidence=IGI] [GO:0008284
"positive regulation of cell proliferation" evidence=IMP]
[GO:0035088 "establishment or maintenance of apical/basal cell
polarity" evidence=IMP] [GO:0007424 "open tracheal system
development" evidence=IMP] [GO:0007399 "nervous system development"
evidence=IMP] [GO:0035090 "maintenance of apical/basal cell
polarity" evidence=IMP] [GO:0061336 "cell morphogenesis involved in
Malpighian tubule morphogenesis" evidence=IMP] [GO:0007443
"Malpighian tubule morphogenesis" evidence=IMP] [GO:0016028
"rhabdomere" evidence=IDA] [GO:0001745 "compound eye morphogenesis"
evidence=IGI;IMP] [GO:0042327 "positive regulation of
phosphorylation" evidence=IMP] [GO:0035330 "regulation of hippo
signaling cascade" evidence=IGI] [GO:0046621 "negative regulation
of organ growth" evidence=IMP] [GO:0035002 "liquid clearance, open
tracheal system" evidence=IGI] InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 Pfam:PF07645
PROSITE:PS01187 PROSITE:PS50026 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 EMBL:AE014297 GO:GO:0016021 GO:GO:0008104
GO:GO:0005918 GO:GO:0007435 GO:GO:0030507 GO:GO:0016324
GO:GO:0008284 GO:GO:0005509 GO:GO:0048477 GO:GO:0045494
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0034332
PROSITE:PS01186 eggNOG:NOG12793 InterPro:IPR001791 Pfam:PF00054
SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025 GO:GO:0042327
GO:GO:0046621 GO:GO:0016044 GO:GO:0016327 GO:GO:0045186
GO:GO:0016028 GO:GO:0045746 GO:GO:0035003 Pfam:PF02210
GO:GO:0042052 GO:GO:0045198 GO:GO:0045218 GO:GO:0035002 EMBL:M33753
EMBL:AY118509 EMBL:X05144 PIR:A35672 PIR:B26637
RefSeq:NP_001036751.1 RefSeq:NP_524480.2 ProteinModelPortal:P10040
SMR:P10040 DIP:DIP-40915N IntAct:P10040 MINT:MINT-89007
STRING:P10040 EnsemblMetazoa:FBtr0084603 GeneID:42896
KEGG:dme:Dmel_CG6383 CTD:42896 FlyBase:FBgn0259685
GeneTree:ENSGT00700000104305 InParanoid:P10040 KO:K16681
OrthoDB:EOG4C2FR9 GenomeRNAi:42896 NextBio:831149 Bgee:P10040
GermOnline:CG6383 GO:GO:0061336 GO:GO:0046664 GO:GO:0016332
GO:GO:0016334 GO:GO:0035090 GO:GO:0035330 Uniprot:P10040
Length = 2146
Score = 166 (63.5 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 96/426 (22%), Positives = 161/426 (37%)
Query: 37 GRSKECLEDKCNKTPCEHGGKC----ITTPGSSY-CLCPLGFTGDLCQ--TRLDLQVPQF 89
G++ L C++ PC +GG C I Y C C GF GD C+ T L +
Sbjct: 972 GKNCSVLLKGCDQNPCLNGGACLPYLINEVTHLYNCTCENGFQGDKCEKTTTLSMVATSL 1031
Query: 90 NGSSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYN--GHRADGVGDFIALYLNDRYVD 147
+ R +G Y D+ + F+ PNG+L + G + + V + L +N R
Sbjct: 1032 ISVTTEREEG----Y----DINLQFRTTLPNGVLAFGTTGEKNEPVSYILEL-INGRLNL 1082
Query: 148 FTFDLGTGAATLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSP-GPF-----T 201
+ L S ++ WHK+ + H L + Q + P G + +
Sbjct: 1083 HSSLLNKWEGVFIGSK-LNDSNWHKVFVAINTSHLVLSAN---DEQAIFPVGSYETANNS 1138
Query: 202 QXXXXXXXXXGGVPDY-NIVSPKVKIKSSFIGCIQKVLINN-------HELNILGEAIQG 253
Q G +P+ + + S+F+GC+Q +++N + NI ++
Sbjct: 1139 QPSFPRTYLGGTIPNLKSYLRHLTHQPSAFVGCMQDIMVNGKWIFPDEQDANISYTKLEN 1198
Query: 254 VNVVNC--AHPCITQPCGS-GSCVPLYDGYKCVCTQSCKESHLTEVMCASFDHGASFLHY 310
V C C PC S G C L+ + C C + H C A+F H
Sbjct: 1199 VQS-GCPRTEQCKPNPCHSNGECTDLWHTFACHCPRPFF-GHT----CQHNMTAATFGH- 1251
Query: 311 LDPEIIHSSGLLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSK------- 363
HS+ ++ V R +I M I+T +G + + G+ K
Sbjct: 1252 --ENTTHSAVIVE---TTDVARRAIRSILDISMFIRTREPTGQVFYLGTDPRKAPTKNIG 1306
Query: 364 -DFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGVWHRLTVHRNFMVV---MHGSSHT 419
++A +H G V K++NG H + V RN +V ++G+ +
Sbjct: 1307 DSYVAAKLHGGELLVKMQFSGTPEAYTVGGQKLDNGYNHLIEVVRNQTLVQVKLNGTEYF 1366
Query: 420 RSNKSS 425
R S+
Sbjct: 1367 RKTLST 1372
Score = 104 (41.7 bits), Expect = 0.00097, Sum P(2) = 0.00097
Identities = 20/52 (38%), Positives = 29/52 (55%)
Query: 45 DKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQ-FNGSSYL 95
D+C+K PC +GG+C T G C C G+ G++C + Q Q NG + L
Sbjct: 427 DECDKNPCLNGGRCFDTYGWYTCQCLDGWGGEICDRPMTCQTQQCLNGGTCL 478
Score = 72 (30.4 bits), Expect = 0.00097, Sum P(2) = 0.00097
Identities = 14/26 (53%), Positives = 17/26 (65%)
Query: 263 CITQPC-GSGSCVPLYDG-YKCVCTQ 286
C TQPC G CV L +G Y+C CT+
Sbjct: 611 CATQPCQNGGECVDLPNGDYECKCTR 636
Score = 45 (20.9 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 12/34 (35%), Positives = 16/34 (47%)
Query: 41 ECLEDKCNKTPCEHGGKCITTPG---SSYCLCPL 71
EC+ KC P G C T+ G S+ L P+
Sbjct: 512 ECVGGKCVCKPGSSGYNCQTSTGDGASALALTPI 545
>UNIPROTKB|F1Q3G2 [details] [associations]
symbol:SLIT3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IEA] [GO:0061364
"apoptotic process involved in luteolysis" evidence=IEA]
[GO:0051414 "response to cortisol stimulus" evidence=IEA]
[GO:0050919 "negative chemotaxis" evidence=IEA] [GO:0048846 "axon
extension involved in axon guidance" evidence=IEA] [GO:0048495
"Roundabout binding" evidence=IEA] [GO:0035385 "Roundabout
signaling pathway" evidence=IEA] [GO:0032870 "cellular response to
hormone stimulus" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=IEA] [GO:0010629 "negative regulation of gene
expression" evidence=IEA] [GO:0009887 "organ morphogenesis"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0005615 "extracellular space"
evidence=IEA] [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0008285 GO:GO:0005615 GO:GO:0030308 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887
PROSITE:PS01186 GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791
SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
GO:GO:0070100 Pfam:PF12661 Pfam:PF01463 GO:GO:0051414
GeneTree:ENSGT00700000104083 GO:GO:0050919 GO:GO:0035385
GO:GO:0061364 OMA:SVDCHGL EMBL:AAEX03003028 EMBL:AAEX03003027
Ensembl:ENSCAFT00000026988 Uniprot:F1Q3G2
Length = 1319
Score = 148 (57.2 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 60/245 (24%), Positives = 94/245 (38%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQFNGS-SYLRYQGLGEQYL 105
C++ C++G +CI C CP GF G C+ + + F G SY+ +
Sbjct: 920 CDQYECQNGAQCIVVQQEPTCRCPPGFAGPRCEKLITVN---FVGKDSYVELASAKVRPQ 976
Query: 106 SLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFD-LGTGAATLRSSNP 164
+ + L + + NGILLY G D +AL L +V +D L + T+ S
Sbjct: 977 ANISLQVATD--KDNGILLYKGDN-----DPLALELYQGHVRLIYDSLSSPPTTVYSVET 1029
Query: 165 ISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSP-- 222
++ G++H + L + L VD+ + GG+P +S
Sbjct: 1030 VNDGQFHSVELVMLNQTLNLVVDKGAPKSLGKLQKQPAVGINSPLYLGGIPTSTGLSALR 1089
Query: 223 --KVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNCAHPCITQPCGSGSCVPLY-DG 279
+ F GCI +V INN + Q + V C C G C + D
Sbjct: 1090 QGTDRPLGGFHGCIHEVRINNELQDFKALPPQSLGVSPGCKSCTV--CKHGLCRSVEKDS 1147
Query: 280 YKCVC 284
C C
Sbjct: 1148 VVCEC 1152
Score = 104 (41.7 bits), Expect = 2.8e-06, Sum P(3) = 2.8e-06
Identities = 18/55 (32%), Positives = 28/55 (50%)
Query: 36 KGRSKECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQFN 90
+G+ E D C CE+ C+ + C+CP +TG+LC +D VP+ N
Sbjct: 786 EGQQCEINPDDCEDNDCENNATCVDGINNYVCVCPPNYTGELCDEVIDHCVPEIN 840
Score = 92 (37.4 bits), Expect = 5.0e-05, Sum P(3) = 5.0e-05
Identities = 18/51 (35%), Positives = 25/51 (49%)
Query: 38 RSKECLE--DKCNKTPCEHGGKCITTPGSS---YCLCPLGFTGDLCQTRLD 83
+ K+C + C + PC+HGG C + C CPLGF G C+ D
Sbjct: 745 KGKDCTVPINTCIQNPCQHGGTCHLSESHKDGFSCSCPLGFEGQQCEINPD 795
Score = 84 (34.6 bits), Expect = 0.00034, Sum P(3) = 0.00034
Identities = 20/57 (35%), Positives = 29/57 (50%)
Query: 46 KCN---KTPCEHGGKCITTPGSSY-CLCPLGFTGDLCQTRLD--LQVP-QFNGSSYL 95
KCN +PC++ G C P Y C CP G+ G C ++ +Q P Q G+ +L
Sbjct: 713 KCNACLSSPCKNNGTCSQDPVELYRCTCPYGYKGKDCTVPINTCIQNPCQHGGTCHL 769
Score = 74 (31.1 bits), Expect = 2.8e-06, Sum P(3) = 2.8e-06
Identities = 15/62 (24%), Positives = 31/62 (50%)
Query: 340 NIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGV 399
NI +++ T +G++L+ G + D LAL ++ G+ ++Y +N+G
Sbjct: 978 NISLQVATDKDNGILLYKGDN---DPLALELYQGHVRLIYDSLSSPPTTVYSVETVNDGQ 1034
Query: 400 WH 401
+H
Sbjct: 1035 FH 1036
Score = 63 (27.2 bits), Expect = 2.8e-06, Sum P(3) = 2.8e-06
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 263 CITQPCGSGS-CVPLYDGYKCVCTQ 286
C+ C G+ CV +GY C+C Q
Sbjct: 875 CVAHKCRHGAQCVDAVNGYTCICPQ 899
Score = 59 (25.8 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 9/25 (36%), Positives = 11/25 (44%)
Query: 262 PCITQPCGSGSCVPLYDGYKCVCTQ 286
PC+ C G CV Y C C +
Sbjct: 1168 PCLGHSCNHGKCVATGTSYVCKCAE 1192
>MGI|MGI:2679260 [details] [associations]
symbol:Crb2 "crumbs homolog 2 (Drosophila)" species:10090
"Mus musculus" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0050896 "response to stimulus" evidence=IEA] InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
MGI:MGI:2679260 GO:GO:0016021 GO:GO:0005509 GO:GO:0050896
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 eggNOG:NOG12793 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 Pfam:PF02210 Pfam:PF12661 KO:K16681
HOVERGEN:HBG080001 HOGENOM:HOG000230899 CTD:286204 OMA:GVTCEAE
OrthoDB:EOG4XWFX3 EMBL:AL805959 EMBL:BC043114 EMBL:BC062128
IPI:IPI00943999 RefSeq:NP_001157038.1 UniGene:Mm.392369
ProteinModelPortal:Q80YA8 SMR:Q80YA8 STRING:Q80YA8
PhosphoSite:Q80YA8 PaxDb:Q80YA8 PRIDE:Q80YA8
Ensembl:ENSMUST00000050372 GeneID:241324 KEGG:mmu:241324
UCSC:uc008jnf.2 GeneTree:ENSGT00700000104308 InParanoid:Q80YA8
NextBio:384989 Bgee:Q80YA8 CleanEx:MM_CRB2 Genevestigator:Q80YA8
Uniprot:Q80YA8
Length = 1282
Score = 144 (55.7 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 79/288 (27%), Positives = 109/288 (37%)
Query: 47 CNKTPCEHGGKCITTPGSS----YCLCPLGFTGDLCQTRLDLQVPQFNGSSYLRYQGLGE 102
C C CI T S +C CP G G C V +GSS GL
Sbjct: 404 CQGHTCPLAATCIPTFKSGLHGYFCRCPPGTYGPFCGQNTTFSV--VSGSSVW---GLVP 458
Query: 103 QYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSS 162
SL L + F+ G L D + L L + T G A L +
Sbjct: 459 AAASL-GLALRFRTTLLAGTLA----TLKDTRDSLELVLVGAVLQATLSRH-GTAVLILT 512
Query: 163 NP-ISL--GEWHKLRLT-RTGR-HAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDY 217
P ++L G WH++ +T G L + P ++ GP G Y
Sbjct: 513 LPDLALNDGHWHQVEVTLHLGTLELRLWHEGCPGQLCVASGPVA-TGPTASVASGPPGSY 571
Query: 218 NIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNCAH--PCITQPCG-SGSCV 274
+I F GC Q V + H L L E ++G ++ C PC PC G+CV
Sbjct: 572 SIYLGG----GVFAGCFQDVRVEGHLL--LPEELKGTVLLGCERREPCQPLPCAHGGACV 625
Query: 275 PLYDGYKCVCTQSCKESHLT-EVMCASFDHG-----ASFL-HYLDPEI 315
L+ ++C C + + + T EV A+F G ASFL H L P +
Sbjct: 626 DLWTHFRCDCPRPYRGATCTDEVPAATFGLGGATSSASFLLHQLGPNL 673
Score = 109 (43.4 bits), Expect = 0.00022, Sum P(3) = 0.00022
Identities = 22/59 (37%), Positives = 29/59 (49%)
Query: 45 DKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLD--LQVPQFNGSSYLRYQGLG 101
D+C PC+HGG C C CPLG+ G C+ +D P +G S L G+G
Sbjct: 114 DECASRPCQHGGTCQNLADHYECHCPLGYAGVTCEAEVDECSSAPCLHGGSCL--DGVG 170
Score = 106 (42.4 bits), Expect = 0.00046, Sum P(3) = 0.00046
Identities = 19/47 (40%), Positives = 26/47 (55%)
Query: 37 GRSKECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLD 83
G + E D+C+ PC HGG C+ GS C+C G+ G CQ +D
Sbjct: 144 GVTCEAEVDECSSAPCLHGGSCLDGVGSYRCVCAPGYAGANCQLDVD 190
Score = 68 (29.0 bits), Expect = 0.00022, Sum P(3) = 0.00022
Identities = 21/62 (33%), Positives = 27/62 (43%)
Query: 253 GVNVVNCAHPCITQPCGSGS-CVPLYDGYKCVCTQSCKESHLTE---VMCASFD--HGAS 306
G N C +QPC G C L +G++C C + E E + CAS H AS
Sbjct: 182 GANCQLDVDECQSQPCAHGGVCHDLVNGFRCDCADTGYEGARCEQEVLECASAPCAHNAS 241
Query: 307 FL 308
L
Sbjct: 242 CL 243
Score = 64 (27.6 bits), Expect = 0.00055, Sum P(3) = 0.00055
Identities = 19/83 (22%), Positives = 33/83 (39%)
Query: 238 LINNHELNILGEAIQGVNVVNCAHPCITQPCG-SGSCVPLYDGYKCVCTQ--SCKESHLT 294
L+N + +G C + PC + SC+ + ++C+C S + +
Sbjct: 206 LVNGFRCDCADTGYEGARCEQEVLECASAPCAHNASCLDGFRSFRCLCWPGFSGERCEVD 265
Query: 295 EVMCAS--FDHGASFLHYLDPEI 315
E CAS +G L DP +
Sbjct: 266 EDECASGPCQNGGQCLQRSDPTL 288
Score = 62 (26.9 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 37 GRSKECLEDKCNKTPCEHGGKCI 59
G E ED+C PC++GG+C+
Sbjct: 259 GERCEVDEDECASGPCQNGGQCL 281
Score = 44 (20.5 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 6/16 (37%), Positives = 11/16 (68%)
Query: 394 KINNGVWHRLTVHRNF 409
++ +G WHR+ + R F
Sbjct: 947 RVADGAWHRVRLAREF 962
>UNIPROTKB|F1NXZ5 [details] [associations]
symbol:FAT3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0007156 "homophilic cell
adhesion" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR002126 InterPro:IPR015919 InterPro:IPR018097
InterPro:IPR020894 Pfam:PF00008 Pfam:PF00028 Pfam:PF07645
PRINTS:PR00205 PROSITE:PS00232 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS50268 SMART:SM00112 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 GO:GO:0016021 GO:GO:0005886 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 InterPro:IPR001791 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 GO:GO:0007156 SUPFAM:SSF49313 Gene3D:2.60.40.60
GeneTree:ENSGT00700000104156 Pfam:PF02210 KO:K16506 CTD:120114
OMA:DNGWMVT EMBL:AADN02004863 EMBL:AADN02004864 EMBL:AADN02004865
EMBL:AADN02004866 EMBL:AADN02004867 EMBL:AADN02004868
EMBL:AADN02004869 EMBL:AADN02004870 EMBL:AADN02004871
IPI:IPI00583549 RefSeq:NP_001104793.1 UniGene:Gga.49207
Ensembl:ENSGALT00000027846 GeneID:395167 KEGG:gga:395167
NextBio:20815258 Uniprot:F1NXZ5
Length = 4557
Score = 177 (67.4 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 67/261 (25%), Positives = 106/261 (40%)
Query: 45 DKCNKTPCEHGGKCITTPGSS---YCLCPLGFTGDLCQTRLDLQVPQFNGSSYLRYQGLG 101
D C + PC +C+ + C CP G G+ C L F G+SY++Y+
Sbjct: 3798 DPCLEKPCPGDMQCVGYEANRRPFICQCPPGKLGE-CSGHTSLS---FAGNSYIKYRVSE 3853
Query: 102 EQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLR- 160
L + + ++ NGI++Y RA+ I L + D + F D GTG L
Sbjct: 3854 NSKKEEFKLALRLRTLQSNGIIMYT--RANPC---IILKIVDGKLWFQLDCGTGPGILGI 3908
Query: 161 SSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGG---VPDY 217
S ++ G WH + L L +D + +P F G V +
Sbjct: 3909 SGRAVNDGSWHSVFLELNRNFTSLSLDDSYVERRKAPLYFQTLSTDSSVYFGAQVQVDNV 3968
Query: 218 NIVSPK--VKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVN-------CA-HP--CIT 265
++ K ++ S F GC+ V++NN+EL + + VV C +P C
Sbjct: 3969 RSLTDKRTTQVLSGFQGCLDSVVLNNNELPLQNKRSSFAEVVGLTELKLGCVLYPDACER 4028
Query: 266 QPC-GSGSCVPLYDG-YKCVC 284
PC G+C + G Y+C C
Sbjct: 4029 HPCQNGGTCTSVPSGGYQCNC 4049
Score = 39 (18.8 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 468 DSGLYVGGVEDIEELT 483
D+G GV+D EE+T
Sbjct: 4309 DAGTESKGVDDAEEVT 4324
>UNIPROTKB|F1MAS4 [details] [associations]
symbol:F1MAS4 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0004930 "G-protein coupled receptor
activity" evidence=IEA] [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007156 "homophilic cell adhesion" evidence=IEA] [GO:0007218
"neuropeptide signaling pathway" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR000203
InterPro:IPR000742 InterPro:IPR000832 InterPro:IPR001879
InterPro:IPR001881 InterPro:IPR002126 InterPro:IPR015919
InterPro:IPR017981 InterPro:IPR020894 Pfam:PF00002 Pfam:PF00008
Pfam:PF00028 Pfam:PF01825 Pfam:PF02793 PRINTS:PR00205
PRINTS:PR00249 PROSITE:PS00232 PROSITE:PS50026 PROSITE:PS50221
PROSITE:PS50227 PROSITE:PS50261 PROSITE:PS50268 SMART:SM00008
SMART:SM00112 SMART:SM00179 SMART:SM00181 SMART:SM00303
InterPro:IPR000152 GO:GO:0016021 GO:GO:0005886 GO:GO:0001764
GO:GO:0009952 GO:GO:0004930 GO:GO:0007218 GO:GO:0005509
GO:GO:0007626 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0042472 GO:GO:0001942 PROSITE:PS01186
GO:GO:0007266 GO:GO:0001843 GO:GO:0042060 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 SMART:SM00180 SMART:SM00282
PROSITE:PS00010 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
GO:GO:0032956 GO:GO:0007156 SUPFAM:SSF49313 InterPro:IPR022624
Pfam:PF12003 Gene3D:2.60.40.60 GeneTree:ENSGT00700000104170
GO:GO:0045176 Pfam:PF02210 GO:GO:0048105 GO:GO:0042249
GO:GO:0060490 GO:GO:0060488 GO:GO:0090179 GO:GO:0060489
GO:GO:0090251 IPI:IPI00361486 ProteinModelPortal:F1MAS4
Ensembl:ENSRNOT00000036025 Uniprot:F1MAS4
Length = 3064
Score = 181 (68.8 bits), Expect = 2.0e-07, Sum P(3) = 2.0e-07
Identities = 66/257 (25%), Positives = 110/257 (42%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQ-FNGSSYLRYQGLGEQYL 105
C+ T C++GG C+ + C CPL F G C+ + PQ F G S + + L
Sbjct: 1668 CDGTLCQNGGTCVNRWNTYLCECPLRFGGKNCEQAMPH--PQRFTGESIVSWSDLDITIS 1725
Query: 106 SLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLG-TGAATLR-SSN 163
L ++F+ + +G+L+ G + L + + Y+ F G + A+++ S
Sbjct: 1726 VPWYLGLMFRTRKEDGVLM---EATAGTSSKLHLQILNSYIRFEVSHGPSDVASMQLSKT 1782
Query: 164 PISLGEWH----KLRLTRTGRHA-YLQV---DRFPSSQILSPGPFTQXXXXXXXXXGGVP 215
++ G WH +LR + G+ YL + D + G GGV
Sbjct: 1783 RVTDGGWHHLLIELRSAKEGKDIKYLAIMTLDYGMDQSTVQIGNQLPGLKMRTIVIGGVS 1842
Query: 216 DYNIVSPKVKIKSSFIGCIQKVLINNHELNI----LGEAIQGVNVVN-C--AHPCITQPC 268
+ KV ++ F GC+Q V + NI + +A++ V V + C PC + PC
Sbjct: 1843 E-----DKVSVRHGFRGCMQGVRVGETSTNIATLNMNDALK-VRVKDGCDVEDPCASSPC 1896
Query: 269 GSGS-CVPLYDGYKCVC 284
S C +D Y C+C
Sbjct: 1897 PPHSHCRDTWDSYSCIC 1913
Score = 149 (57.5 bits), Expect = 6.3e-05, Sum P(3) = 6.3e-05
Identities = 38/132 (28%), Positives = 65/132 (49%)
Query: 46 KCNKTPCEHGGKCITTP-GSSYCLCPLG-FTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQ 103
+C C++GG C+ G +C+CP G + C+ PQ S++ ++GL ++
Sbjct: 1421 RCASGVCKNGGTCVNLLIGGFHCVCPPGEYEHPYCEVSTRSFPPQ----SFVTFRGLRQR 1476
Query: 104 YLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSN 163
+ +++ F + N +LLYNG R + DFIAL + + + TF G T+
Sbjct: 1477 FH--FTVSLAFATQDRNALLLYNG-RFNEKHDFIALEIVEEQLQLTFSAGETTTTVTPQV 1533
Query: 164 P--ISLGEWHKL 173
P +S G WH +
Sbjct: 1534 PGGVSDGRWHSV 1545
Score = 50 (22.7 bits), Expect = 6.3e-05, Sum P(3) = 6.3e-05
Identities = 38/197 (19%), Positives = 71/197 (36%)
Query: 212 GGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNCAHPCITQPCGSG 271
GGVP N+ F+GC++ + I+ +++ CA C
Sbjct: 1616 GGVP--NLPEDFPVHSRQFVGCMRNLSIDGRIVDMAAFIANNGTRAGCASQ--RNFCDGT 1671
Query: 272 SCVPLYDGYKCVCTQSCKESHLTEVMCASFDHGASFLHYLD-PEIIHSSGLLHYKFQLHV 330
C +G CV + ++L E C G + + P+ ++ + L +
Sbjct: 1672 LC---QNGGTCVNRWN---TYLCE--CPLRFGGKNCEQAMPHPQRFTGESIVSWS-DLDI 1722
Query: 331 DFRITGYEFNIDMRIKTSSSSGLILW-TGSSQSKDFLALGIHNGYAHVMYXXX-XXXXXX 388
+ Y + + +T G+++ T + SK L L I N Y
Sbjct: 1723 TISVPWY---LGLMFRTRKEDGVLMEATAGTSSK--LHLQILNSYIRFEVSHGPSDVASM 1777
Query: 389 XXXQTKINNGVWHRLTV 405
+T++ +G WH L +
Sbjct: 1778 QLSKTRVTDGGWHHLLI 1794
Score = 41 (19.5 bits), Expect = 2.0e-07, Sum P(3) = 2.0e-07
Identities = 6/14 (42%), Positives = 10/14 (71%)
Query: 47 CNKTPCEHGGKCIT 60
C + PCE+ KC++
Sbjct: 1322 CLREPCENYMKCVS 1335
Score = 37 (18.1 bits), Expect = 2.0e-07, Sum P(3) = 2.0e-07
Identities = 12/54 (22%), Positives = 26/54 (48%)
Query: 438 HRTGKQCLI--RIDTDYSMQSISGGKFEQLNTDSGLYVGGVEDIEELTRSKYHH 489
H T K + + + +S++G E+L+T+ L V +E +++ +H
Sbjct: 2862 HSTPKADALANHVPAGWPEESLAGSDSEELDTEPHLKVETKVSVELHRQAQGNH 2915
>FB|FBgn0262018 [details] [associations]
symbol:CadN2 "Cadherin-N2" species:7227 "Drosophila
melanogaster" [GO:0050839 "cell adhesion molecule binding"
evidence=ISS] [GO:0004872 "receptor activity" evidence=ISS]
[GO:0005887 "integral to plasma membrane" evidence=ISS] [GO:0016339
"calcium-dependent cell-cell adhesion" evidence=ISS] [GO:0007156
"homophilic cell adhesion" evidence=IEA;ISS] [GO:0005509 "calcium
ion binding" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0048846 "axon extension involved in axon
guidance" evidence=IMP] [GO:0016318 "ommatidial rotation"
evidence=IMP] [GO:0045463 "R8 cell development" evidence=IMP]
[GO:0045467 "R7 cell development" evidence=IMP] InterPro:IPR000233
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR002126
InterPro:IPR015919 InterPro:IPR020894 Pfam:PF00008 Pfam:PF00028
Pfam:PF01049 PRINTS:PR00205 PROSITE:PS00232 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS50268 SMART:SM00112 SMART:SM00179
SMART:SM00181 GO:GO:0005887 EMBL:AE014134 GO:GO:0045467
GO:GO:0005509 GO:GO:0004872 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 GO:GO:0050839 InterPro:IPR001791
SMART:SM00282 PROSITE:PS50025 GO:GO:0016339 GO:GO:0007156
SUPFAM:SSF49313 Gene3D:2.60.40.60 GO:GO:0016318 Pfam:PF02210
RefSeq:NP_001036368.2 RefSeq:NP_609855.3 ProteinModelPortal:Q9VJB6
SMR:Q9VJB6 IntAct:Q9VJB6 GeneID:35071 KEGG:dme:Dmel_CG42829
CTD:35071 FlyBase:FBgn0262018 eggNOG:NOG76305 InParanoid:Q9VJB6
OrthoDB:EOG4Q83C6 NextBio:791698 GermOnline:CG7527 GO:GO:0048846
GO:GO:0045463 Uniprot:Q9VJB6
Length = 2215
Score = 151 (58.2 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 44/153 (28%), Positives = 65/153 (42%)
Query: 44 EDKCNKTPCEHGGKCITTPGSSYCL-CPLGFTGDLCQTRLDLQVPQFNGSSYLRYQGLGE 102
+ C C +GG+C+ T C+ CP+G+ G CQ F G+ + Y L
Sbjct: 1144 DHNCRTHLCYNGGRCVETRNGPKCVACPVGYNGPRCQQ----STRSFRGNGWAWYPPLQL 1199
Query: 103 QYLSLLDLTIVFKAIEPNGILLYNGH------RADGVGDFIALYLNDRYVDFTFDLGTGA 156
S L L + + + G++LYNG + DFIAL L Y D G+G
Sbjct: 1200 CQESHLSLEFITRVAD--GLILYNGPIVPPKPEETVISDFIALELEQGYPRLLIDFGSGT 1257
Query: 157 ATLRSSNPISL--GEWHKLRLTRTGRHAYLQVD 187
LR +L G WH+L + + + VD
Sbjct: 1258 LELRVKTKKTLDDGVWHRLDIFWDTENVRMVVD 1290
Score = 59 (25.8 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 19/111 (17%), Positives = 41/111 (36%)
Query: 324 YKFQLHVDFRIT----GYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMY 379
+K Q +V F ++ + + +R +T G + +++ L + G+ Y
Sbjct: 1438 FKAQSYVKFALSFEPDRFSTQLQLRFRTREQGGELFRVSDQHHREYAILELRRGHLQFRY 1497
Query: 380 XXXXXXXXX---XXXQTKINNGVWHRLTVHRN---FMVVMHGSSHTRSNKS 424
+N+G WH + + R ++ + G R N+S
Sbjct: 1498 NLNSMRNEEQLLTLTAIAVNDGQWHVIRISRYGSAALMELDGGESRRYNES 1548
>UNIPROTKB|O75094 [details] [associations]
symbol:SLIT3 "Slit homolog 3 protein" species:9606 "Homo
sapiens" [GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0009887 "organ morphogenesis" evidence=IEA]
[GO:0010629 "negative regulation of gene expression" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=NAS] [GO:0005739
"mitochondrion" evidence=NAS] [GO:0005615 "extracellular space"
evidence=IDA] [GO:0048846 "axon extension involved in axon
guidance" evidence=IDA] [GO:0050919 "negative chemotaxis"
evidence=IDA] [GO:0061364 "apoptotic process involved in
luteolysis" evidence=IEP] [GO:0032870 "cellular response to hormone
stimulus" evidence=IEP] [GO:0051414 "response to cortisol stimulus"
evidence=IEP] [GO:0048495 "Roundabout binding" evidence=IPI]
[GO:0021834 "chemorepulsion involved in embryonic olfactory bulb
interneuron precursor migration" evidence=IDA] [GO:0007411 "axon
guidance" evidence=IDA;TAS] [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IMP] [GO:0030308
"negative regulation of cell growth" evidence=IMP] [GO:0035385
"Roundabout signaling pathway" evidence=IMP] InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005739
Reactome:REACT_111045 GO:GO:0008285 GO:GO:0005615 GO:GO:0007420
GO:GO:0030308 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887 PROSITE:PS01186
GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791 SMART:SM00282
PROSITE:PS50025 GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 GO:GO:0048846 GO:GO:0070100 Pfam:PF12661
Pfam:PF01463 GO:GO:0051414 GO:GO:0050919 GO:GO:0035385
GO:GO:0061364 HOGENOM:HOG000116120 HOVERGEN:HBG057959
OrthoDB:EOG4D7Z4T EMBL:AB017169 EMBL:AB011538 EMBL:AY358884
EMBL:AC008409 EMBL:AC008479 EMBL:AC011365 EMBL:AC011389
EMBL:AC027311 EMBL:AC094081 EMBL:AC112165 EMBL:BC146759
EMBL:AL122074 EMBL:AF075240 IPI:IPI00409709 IPI:IPI00409710
IPI:IPI00983148 PIR:T34555 RefSeq:NP_003053.1 UniGene:Hs.604116
ProteinModelPortal:O75094 SMR:O75094 IntAct:O75094
MINT:MINT-2797284 STRING:O75094 PhosphoSite:O75094 PaxDb:O75094
PRIDE:O75094 Ensembl:ENST00000404867 Ensembl:ENST00000519560
GeneID:6586 KEGG:hsa:6586 UCSC:uc003mab.3 CTD:6586
GeneCards:GC05M168021 H-InvDB:HIX0005394 HGNC:HGNC:11087
HPA:HPA051630 MIM:603745 neXtProt:NX_O75094 PharmGKB:PA35940
InParanoid:O75094 KO:K06850 PhylomeDB:O75094 ChiTaRS:SLIT3
GenomeRNAi:6586 NextBio:25629 Bgee:O75094 CleanEx:HS_SLIT3
Genevestigator:O75094 GermOnline:ENSG00000184347 Uniprot:O75094
Length = 1523
Score = 149 (57.5 bits), Expect = 2.3e-07, Sum P(3) = 2.3e-07
Identities = 60/245 (24%), Positives = 94/245 (38%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQFNGS-SYLRYQGLGEQYL 105
C++ C++G +CI C CP GF G C+ + + F G SY+ +
Sbjct: 1123 CDQYECQNGAQCIVVQQEPTCRCPPGFAGPRCEKLITVN---FVGKDSYVELASAKVRPQ 1179
Query: 106 SLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFD-LGTGAATLRSSNP 164
+ + L + + NGILLY G D +AL L +V +D L + T+ S
Sbjct: 1180 ANISLQVATD--KDNGILLYKGDN-----DPLALELYQGHVRLVYDSLSSPPTTVYSVET 1232
Query: 165 ISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSP-- 222
++ G++H + L + L VD+ + GG+P +S
Sbjct: 1233 VNDGQFHSVELVTLNQTLNLVVDKGTPKSLGKLQKQPAVGINSPLYLGGIPTSTGLSALR 1292
Query: 223 --KVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNCAHPCITQPCGSGSCVPLY-DG 279
+ F GCI +V INN + Q + V C C G C + D
Sbjct: 1293 QGTDRPLGGFHGCIHEVRINNELQDFKALPPQSLGVSPGCKSCTV--CKHGLCRSVEKDS 1350
Query: 280 YKCVC 284
C C
Sbjct: 1351 VVCEC 1355
Score = 104 (41.7 bits), Expect = 8.6e-06, Sum P(3) = 8.6e-06
Identities = 18/55 (32%), Positives = 28/55 (50%)
Query: 36 KGRSKECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQFN 90
+G+ E D C CE+ C+ + C+CP +TG+LC +D VP+ N
Sbjct: 989 EGQRCEINPDDCEDNDCENNATCVDGINNYVCICPPNYTGELCDEVIDHCVPELN 1043
Score = 92 (37.4 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 18/51 (35%), Positives = 25/51 (49%)
Query: 38 RSKECLE--DKCNKTPCEHGGKCITTPGSS---YCLCPLGFTGDLCQTRLD 83
+ K+C + C + PC+HGG C + C CPLGF G C+ D
Sbjct: 948 KGKDCTVPINTCIQNPCQHGGTCHLSDSHKDGFSCSCPLGFEGQRCEINPD 998
Score = 74 (31.1 bits), Expect = 8.6e-06, Sum P(3) = 8.6e-06
Identities = 15/62 (24%), Positives = 31/62 (50%)
Query: 340 NIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGV 399
NI +++ T +G++L+ G + D LAL ++ G+ ++Y +N+G
Sbjct: 1181 NISLQVATDKDNGILLYKGDN---DPLALELYQGHVRLVYDSLSSPPTTVYSVETVNDGQ 1237
Query: 400 WH 401
+H
Sbjct: 1238 FH 1239
Score = 60 (26.2 bits), Expect = 2.3e-07, Sum P(3) = 2.3e-07
Identities = 14/50 (28%), Positives = 20/50 (40%)
Query: 262 PCITQPCGSGSCVPLYDGYKCVCTQS-----CKESHLTEVMCASFD--HG 304
PC+ C G CV Y C C + C + + C++F HG
Sbjct: 1371 PCLGHRCHHGKCVATGTSYMCKCAEGYGGDLCDNKNDSANACSAFKCHHG 1420
Score = 60 (26.2 bits), Expect = 8.6e-06, Sum P(3) = 8.6e-06
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 263 CITQPCGSGS-CVPLYDGYKCVCTQ 286
C+ C G+ CV +GY C C Q
Sbjct: 1078 CVAHKCRHGAQCVDTINGYTCTCPQ 1102
Score = 42 (19.8 bits), Expect = 2.3e-07, Sum P(3) = 2.3e-07
Identities = 11/26 (42%), Positives = 12/26 (46%)
Query: 44 EDKCNKTPCEHGGKCITTPGSSYCLC 69
E KC P + G C PG S LC
Sbjct: 1048 EAKC--IPLDKGFSCECVPGYSGKLC 1071
>UNIPROTKB|F1MC84 [details] [associations]
symbol:F1MC84 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007156 "homophilic cell adhesion" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005509 "calcium ion binding"
evidence=IEA] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR002126 InterPro:IPR015919 InterPro:IPR018097
InterPro:IPR020894 Pfam:PF00028 Pfam:PF07645 PRINTS:PR00205
PROSITE:PS00232 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS50268
SMART:SM00112 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0016021 GO:GO:0005886 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186
InterPro:IPR001791 SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025
GO:GO:0007156 SUPFAM:SSF49313 Gene3D:2.60.40.60
GeneTree:ENSGT00700000104156 Pfam:PF02210 OMA:DNGWMVT
EMBL:DAAA02062314 EMBL:DAAA02062315 EMBL:DAAA02062316
EMBL:DAAA02062317 IPI:IPI01001651 Ensembl:ENSBTAT00000005332
Uniprot:F1MC84
Length = 4587
Score = 158 (60.7 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 62/244 (25%), Positives = 99/244 (40%)
Query: 45 DKCNKTPCEHGGKCITTPGSS---YCLCPLGFTGDLCQTRLDLQVPQFNGSSYLRYQGLG 101
D C + PC +C+ S C CP G G+ C L F G+SY++Y+ L
Sbjct: 3781 DPCVEKPCPGDMQCVGYEASRRPFLCQCPPGKLGE-CSGHTSLS---FAGNSYIKYR-LS 3835
Query: 102 EQYLSL-LDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLR 160
E L + + ++ NGI++Y RA+ I L + D + F D G+G L
Sbjct: 3836 ENSKEEDFKLALRLRTLQSNGIIMYT--RANPC---IILKIVDGRLWFQLDCGSGPGILG 3890
Query: 161 -SSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYN- 218
S ++ G WH + L L +D + +P F G + +
Sbjct: 3891 ISGRAVNDGSWHSVFLELNRNFTSLALDDSYVERRRAPLYFQTLGTDSAIYFGALVQADS 3950
Query: 219 ---IVSPKV-KIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNCAH---PCITQP--CG 269
+ +V ++ S F GC+ V++NN+EL + + VV C+ P C
Sbjct: 3951 IRSLTDARVTQVLSGFQGCLDSVVLNNNELPLQNKRSSFAEVVGLTELKLGCVLYPDACE 4010
Query: 270 SGSC 273
G C
Sbjct: 4011 RGPC 4014
Score = 58 (25.5 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 16/37 (43%), Positives = 18/37 (48%)
Query: 263 CITQPC-GSGSCVPLYDGYKCVCTQSCKESHLTEVMC 298
C PC GSC P+ G +C SCK LT V C
Sbjct: 4087 CFPNPCRNGGSCDPI--GNTFIC--SCKAG-LTGVTC 4118
Score = 53 (23.7 bits), Expect = 7.6e-07, Sum P(2) = 7.6e-07
Identities = 10/36 (27%), Positives = 17/36 (47%)
Query: 251 IQGVNVVNCAHPCITQPC-GSGSCVPLYDGYKCVCT 285
+ GV + C + C G+CV ++ + C CT
Sbjct: 4113 LTGVTCEEDVNECEREECENGGACVNVFGSFVCNCT 4148
>UNIPROTKB|J3KNP3 [details] [associations]
symbol:SLIT3 "Slit homolog 3 protein" species:9606 "Homo
sapiens" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005576
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 Pfam:PF12661 Pfam:PF01463 EMBL:AC008409
EMBL:AC008479 EMBL:AC011365 EMBL:AC011389 EMBL:AC027311
EMBL:AC094081 EMBL:AC112165 HGNC:HGNC:11087 ChiTaRS:SLIT3
OMA:SVDCHGL ProteinModelPortal:J3KNP3 Ensembl:ENST00000332966
Uniprot:J3KNP3
Length = 1530
Score = 149 (57.5 bits), Expect = 2.4e-07, Sum P(3) = 2.4e-07
Identities = 60/245 (24%), Positives = 94/245 (38%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQFNGS-SYLRYQGLGEQYL 105
C++ C++G +CI C CP GF G C+ + + F G SY+ +
Sbjct: 1130 CDQYECQNGAQCIVVQQEPTCRCPPGFAGPRCEKLITVN---FVGKDSYVELASAKVRPQ 1186
Query: 106 SLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFD-LGTGAATLRSSNP 164
+ + L + + NGILLY G D +AL L +V +D L + T+ S
Sbjct: 1187 ANISLQVATD--KDNGILLYKGDN-----DPLALELYQGHVRLVYDSLSSPPTTVYSVET 1239
Query: 165 ISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSP-- 222
++ G++H + L + L VD+ + GG+P +S
Sbjct: 1240 VNDGQFHSVELVTLNQTLNLVVDKGTPKSLGKLQKQPAVGINSPLYLGGIPTSTGLSALR 1299
Query: 223 --KVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNCAHPCITQPCGSGSCVPLY-DG 279
+ F GCI +V INN + Q + V C C G C + D
Sbjct: 1300 QGTDRPLGGFHGCIHEVRINNELQDFKALPPQSLGVSPGCKSCTV--CKHGLCRSVEKDS 1357
Query: 280 YKCVC 284
C C
Sbjct: 1358 VVCEC 1362
Score = 104 (41.7 bits), Expect = 8.7e-06, Sum P(3) = 8.7e-06
Identities = 18/55 (32%), Positives = 28/55 (50%)
Query: 36 KGRSKECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQFN 90
+G+ E D C CE+ C+ + C+CP +TG+LC +D VP+ N
Sbjct: 996 EGQRCEINPDDCEDNDCENNATCVDGINNYVCICPPNYTGELCDEVIDHCVPELN 1050
Score = 92 (37.4 bits), Expect = 0.00016, Sum P(3) = 0.00016
Identities = 18/51 (35%), Positives = 25/51 (49%)
Query: 38 RSKECLE--DKCNKTPCEHGGKCITTPGSS---YCLCPLGFTGDLCQTRLD 83
+ K+C + C + PC+HGG C + C CPLGF G C+ D
Sbjct: 955 KGKDCTVPINTCIQNPCQHGGTCHLSDSHKDGFSCSCPLGFEGQRCEINPD 1005
Score = 74 (31.1 bits), Expect = 8.7e-06, Sum P(3) = 8.7e-06
Identities = 15/62 (24%), Positives = 31/62 (50%)
Query: 340 NIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGV 399
NI +++ T +G++L+ G + D LAL ++ G+ ++Y +N+G
Sbjct: 1188 NISLQVATDKDNGILLYKGDN---DPLALELYQGHVRLVYDSLSSPPTTVYSVETVNDGQ 1244
Query: 400 WH 401
+H
Sbjct: 1245 FH 1246
Score = 60 (26.2 bits), Expect = 2.4e-07, Sum P(3) = 2.4e-07
Identities = 14/50 (28%), Positives = 20/50 (40%)
Query: 262 PCITQPCGSGSCVPLYDGYKCVCTQS-----CKESHLTEVMCASFD--HG 304
PC+ C G CV Y C C + C + + C++F HG
Sbjct: 1378 PCLGHRCHHGKCVATGTSYMCKCAEGYGGDLCDNKNDSANACSAFKCHHG 1427
Score = 60 (26.2 bits), Expect = 8.7e-06, Sum P(3) = 8.7e-06
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 263 CITQPCGSGS-CVPLYDGYKCVCTQ 286
C+ C G+ CV +GY C C Q
Sbjct: 1085 CVAHKCRHGAQCVDTINGYTCTCPQ 1109
Score = 42 (19.8 bits), Expect = 2.4e-07, Sum P(3) = 2.4e-07
Identities = 11/26 (42%), Positives = 12/26 (46%)
Query: 44 EDKCNKTPCEHGGKCITTPGSSYCLC 69
E KC P + G C PG S LC
Sbjct: 1055 EAKC--IPLDKGFSCECVPGYSGKLC 1078
>ZFIN|ZDB-GENE-070122-3 [details] [associations]
symbol:celsr3 "cadherin, EGF LAG seven-pass G-type
receptor 3" species:7955 "Danio rerio" [GO:0004930 "G-protein
coupled receptor activity" evidence=IEA] [GO:0005509 "calcium ion
binding" evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0007156
"homophilic cell adhesion" evidence=IEA] [GO:0007218 "neuropeptide
signaling pathway" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0004888 "transmembrane signaling receptor
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007166 "cell surface receptor signaling pathway" evidence=IEA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric
acid signaling pathway" evidence=IMP] InterPro:IPR000203
InterPro:IPR000742 InterPro:IPR000832 InterPro:IPR001879
InterPro:IPR001881 InterPro:IPR002126 InterPro:IPR015919
InterPro:IPR017981 InterPro:IPR020894 Pfam:PF00002 Pfam:PF00008
Pfam:PF00028 Pfam:PF01825 PRINTS:PR00205 PRINTS:PR00249
PROSITE:PS00232 PROSITE:PS50026 PROSITE:PS50221 PROSITE:PS50227
PROSITE:PS50261 PROSITE:PS50268 SMART:SM00112 SMART:SM00179
SMART:SM00181 SMART:SM00303 ZFIN:ZDB-GENE-070122-3 GO:GO:0016021
GO:GO:0005886 GO:GO:0004930 GO:GO:0007214 GO:GO:0007218
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 GO:GO:0007156
SUPFAM:SSF49313 InterPro:IPR022624 Pfam:PF12003 Gene3D:2.60.40.60
GeneTree:ENSGT00700000104170 Pfam:PF02210 EMBL:CR847503
EMBL:CR382331 EMBL:CT027605 IPI:IPI00773917
Ensembl:ENSDART00000078334 Bgee:F1R8J2 Uniprot:F1R8J2
Length = 2916
Score = 145 (56.1 bits), Expect = 2.4e-07, Sum P(3) = 2.4e-07
Identities = 41/156 (26%), Positives = 71/156 (45%)
Query: 46 KCNKTPCEHGGKCITTPGSSY-CLCPLG-FTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQ 103
+C C +GG C G + C CP G + C + F S++ ++GL ++
Sbjct: 1155 RCVAGVCRNGGTCRELSGGGFRCECPAGGYEKPYCS----VTTRSFPPKSFMMFRGLRQR 1210
Query: 104 YLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSN 163
+ L +++ F +E NG+L YNG R + DF+AL + D + + G + +
Sbjct: 1211 FH--LSISLSFATLESNGLLFYNG-RFNEKHDFLALEILDGQMVLKYSTGESSTQVSPYL 1267
Query: 164 P--ISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSP 197
P +S G WH + + H Y + R S ++ P
Sbjct: 1268 PGGVSDGNWHTVHI-----HYYNKPKRSVSGEVQGP 1298
Score = 141 (54.7 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 67/255 (26%), Positives = 108/255 (42%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVP-QFNGSSYLRYQGLGEQYL 105
C PC++GG C + + C CP+GF G C L + P +F GSS L + E +
Sbjct: 1402 CKSNPCQNGGTCRVSWETFSCDCPVGFGGKDCS--LVMSHPHRFLGSSALWWDLKNEVTI 1459
Query: 106 SL-LDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLG-TGAATLRSSN 163
+ + +VF+ G+LL +A + I + + V F+ G T LR
Sbjct: 1460 TTPWYMGLVFRTRSKEGVLLQA--QAGQYTNLIFQVVGGQLV-FSVARGSTRPVRLRLDQ 1516
Query: 164 -PISLGEWHKLRL----TRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYN 218
+ G WH L+L R+GR R+ ++ L G + Q GV +
Sbjct: 1517 VQVCDGRWHDLQLELRDVRSGRET-----RYIATVRLDFGLY-QGTVIVGNEINGVKVKH 1570
Query: 219 I----VSPKVKIKSSFIGCIQKVLIN-NHELNILGEAIQGVNV---VNCAHPCITQPCGS 270
+ V ++++ GCIQ V + + L + + V N +PC + PC +
Sbjct: 1571 LHVGGVLGSGEVQNGIRGCIQGVRLGVRPDSPALPRPSRTIKVETGCNVGNPCNSSPCPT 1630
Query: 271 GS-CVPLYDGYKCVC 284
S C +D + CVC
Sbjct: 1631 HSQCTDEWDRHTCVC 1645
Score = 75 (31.5 bits), Expect = 2.4e-07, Sum P(3) = 2.4e-07
Identities = 21/77 (27%), Positives = 36/77 (46%)
Query: 212 GGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNCAH--P-CITQPC 268
GGVP N+ FIGC++ + I+N +++ G + C+ P C + PC
Sbjct: 1350 GGVP--NLPENFPFSTREFIGCMKDLHIDNRPVDMAGFIANNGTLPGCSAKLPFCKSNPC 1407
Query: 269 -GSGSCVPLYDGYKCVC 284
G+C ++ + C C
Sbjct: 1408 QNGGTCRVSWETFSCDC 1424
Score = 41 (19.5 bits), Expect = 0.00055, Sum P(3) = 0.00055
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 213 GVPDYNIVSPKVKIKSSFIGCIQKVLINN 241
G PD+ +S K+ SF G + V++ N
Sbjct: 2337 GNPDFCWISMYDKLMWSFAGPVSVVILMN 2365
Score = 40 (19.1 bits), Expect = 2.4e-07, Sum P(3) = 2.4e-07
Identities = 6/17 (35%), Positives = 12/17 (70%)
Query: 44 EDKCNKTPCEHGGKCIT 60
++ C + PC++ KCI+
Sbjct: 1053 DNVCLREPCQNYMKCIS 1069
>UNIPROTKB|Q90Z43 [details] [associations]
symbol:SLIT3 "Slit3 protein" species:9031 "Gallus gallus"
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0009887 "organ
morphogenesis" evidence=IEA] [GO:0010629 "negative regulation of
gene expression" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=IEA] [GO:0032870 "cellular response to
hormone stimulus" evidence=IEA] [GO:0035385 "Roundabout signaling
pathway" evidence=IEA] [GO:0048495 "Roundabout binding"
evidence=IEA] [GO:0048846 "axon extension involved in axon
guidance" evidence=IEA] [GO:0050919 "negative chemotaxis"
evidence=IEA] [GO:0051414 "response to cortisol stimulus"
evidence=IEA] [GO:0061364 "apoptotic process involved in
luteolysis" evidence=IEA] [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IEA] [GO:0048839
"inner ear development" evidence=IEP] [GO:0007411 "axon guidance"
evidence=IEP] [GO:0060173 "limb development" evidence=IEP]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 GO:GO:0007411 GO:GO:0008285 GO:GO:0005615
GO:GO:0030308 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 GO:GO:0032870 GO:GO:0010629
InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 GO:GO:0060173 GO:GO:0048839
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 HSSP:P00740 GO:GO:0070100 Pfam:PF12661 GO:GO:0051414
GeneTree:ENSGT00700000104083 GO:GO:0050919 GO:GO:0035385
HOGENOM:HOG000116120 HOVERGEN:HBG057959 EMBL:AADN02035923
EMBL:AF364046 IPI:IPI00821967 UniGene:Gga.2000 STRING:Q90Z43
Ensembl:ENSGALT00000041139 InParanoid:Q90Z43 Uniprot:Q90Z43
Length = 792
Score = 146 (56.5 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 60/244 (24%), Positives = 94/244 (38%)
Query: 47 CNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQFNGS-SYLRYQGLGEQYL 105
C+ C++G +CI C C GF G C+ + + F G SY+ +
Sbjct: 391 CDNYECQNGAQCIVAHQEPVCRCLAGFAGQKCEKLITVN---FVGKDSYVELPSAKIRPQ 447
Query: 106 SLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFD-LGTGAATLRSSNP 164
+ + L + + NGILLY G D +AL L +V +D L + T+ S
Sbjct: 448 ANISLQVATD--KDNGILLYKGDN-----DPLALELYQGHVRLIYDTLNSPPTTVYSVET 500
Query: 165 ISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSP-- 222
++ G++H + L + L VD+ + + GG+P +S
Sbjct: 501 VNDGQFHSVELVMLNQTLNLVVDKGTPKSLGKLQKQSSVSLNTPLYIGGIPTSTGLSSLR 560
Query: 223 --KVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNCAHPCITQPCGSGSCVPLYDGY 280
K + F GCI V INN + Q + V+ C C G C L +
Sbjct: 561 QGADKTPNGFHGCIHDVRINNELQDFKDLPQQSIGVLPGCKSC--NICKHGICRSL-EKT 617
Query: 281 KCVC 284
VC
Sbjct: 618 SVVC 621
Score = 99 (39.9 bits), Expect = 2.2e-06, Sum P(3) = 2.2e-06
Identities = 17/55 (30%), Positives = 27/55 (49%)
Query: 36 KGRSKECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLDLQVPQFN 90
+G E D C CE+ C+ + CLCP +TG+LC ++ +P+ N
Sbjct: 257 EGERCEINPDDCEDNDCENNSTCVDGINNYVCLCPPNYTGELCDEVINHCIPELN 311
Score = 93 (37.8 bits), Expect = 9.5e-06, Sum P(3) = 9.5e-06
Identities = 18/51 (35%), Positives = 26/51 (50%)
Query: 36 KGRSKECLEDKCNKTPCEHGGKCITTPGSS---YCLCPLGFTGDLCQTRLD 83
KGR + C + PC++GG C T + C CPLG+ G+ C+ D
Sbjct: 216 KGRDCSVPINSCIQNPCQNGGTCHLTEANKDGFSCSCPLGYEGERCEINPD 266
Score = 88 (36.0 bits), Expect = 3.2e-05, Sum P(3) = 3.2e-05
Identities = 20/54 (37%), Positives = 26/54 (48%)
Query: 46 KCN---KTPCEHGGKCITTPGSSY-CLCPLGFTGDLCQTRLD--LQVPQFNGSS 93
KCN PC++ G C P Y C CP GF G C ++ +Q P NG +
Sbjct: 184 KCNPCLSNPCKNNGTCSNDPVEFYQCTCPFGFKGRDCSVPINSCIQNPCQNGGT 237
Score = 73 (30.8 bits), Expect = 2.2e-06, Sum P(3) = 2.2e-06
Identities = 15/62 (24%), Positives = 31/62 (50%)
Query: 340 NIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYXXXXXXXXXXXXQTKINNGV 399
NI +++ T +G++L+ G + D LAL ++ G+ ++Y +N+G
Sbjct: 449 NISLQVATDKDNGILLYKGDN---DPLALELYQGHVRLIYDTLNSPPTTVYSVETVNDGQ 505
Query: 400 WH 401
+H
Sbjct: 506 FH 507
Score = 63 (27.2 bits), Expect = 2.2e-06, Sum P(3) = 2.2e-06
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 249 EAIQGVNVVNCA---HPCITQPCGSGS-CVPLYDGYKCVCTQ 286
E + G + +C C+ C G+ CV +GY CVC Q
Sbjct: 329 ECLPGYSGKHCEIDDDDCVGHKCRHGAVCVDAVNGYTCVCPQ 370
Score = 57 (25.1 bits), Expect = 3.7e-05, Sum P(3) = 3.7e-05
Identities = 24/68 (35%), Positives = 29/68 (42%)
Query: 245 NILGEAIQGVNVVNCAHPCITQ--PCGSGS-CVPLYDGYKCVCTQ--SCKESHLTEVMCA 299
N GE V+N H CI + PC S CVPL G +C C S K + + C
Sbjct: 293 NYTGELCD--EVIN--H-CIPELNPCQHESKCVPLDKGSRCECLPGYSGKHCEIDDDDCV 347
Query: 300 SFD--HGA 305
HGA
Sbjct: 348 GHKCRHGA 355
Score = 53 (23.7 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 8/25 (32%), Positives = 11/25 (44%)
Query: 262 PCITQPCGSGSCVPLYDGYKCVCTQ 286
PC+ C G C+ Y C C +
Sbjct: 639 PCLNHKCLHGKCMAANVAYTCKCME 663
Score = 42 (19.8 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 14/40 (35%), Positives = 17/40 (42%)
Query: 268 CGSGSC-VPLYDGYKCVCTQSCKESHLTEVMCASFDHGAS 306
CGSG C VPL + Q S TE + + G S
Sbjct: 750 CGSGQCCVPLRSKRRKYFFQCVDGSTFTEELERHVECGCS 789
>UNIPROTKB|J9PA37 [details] [associations]
symbol:NOTCH4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0005509 "calcium ion
binding" evidence=IEA] InterPro:IPR002110 InterPro:IPR000742
InterPro:IPR000800 InterPro:IPR001881 InterPro:IPR010660
InterPro:IPR011656 InterPro:IPR018097 Pfam:PF00008 Pfam:PF00066
Pfam:PF06816 Pfam:PF07645 Pfam:PF07684 PRINTS:PR01452
PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS50088 PROSITE:PS50258
SMART:SM00004 SMART:SM00179 SMART:SM00181 SMART:SM00248
InterPro:IPR000152 GO:GO:0016021 GO:GO:0007275 GO:GO:0030154
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0007219 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 PROSITE:PS00010 Pfam:PF12661
GeneTree:ENSGT00690000101660 SUPFAM:SSF90193 InterPro:IPR022355
PRINTS:PR01987 EMBL:AAEX03008227 EMBL:AAEX03008228
Ensembl:ENSCAFT00000045934 Uniprot:J9PA37
Length = 1672
Score = 132 (51.5 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 26/57 (45%), Positives = 33/57 (57%)
Query: 41 ECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLD--LQVPQFNGSSYL 95
EC + +PCEHGG C+ TPGS CLCP G+TG C+ + L P GS+ L
Sbjct: 306 ECQMAQQGPSPCEHGGSCLNTPGSFNCLCPPGYTGSRCEADHNECLSQPCHPGSTCL 362
Score = 115 (45.5 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 19/38 (50%), Positives = 23/38 (60%)
Query: 45 DKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRL 82
D+C PC G C+ PG+ CLCP GFTG LC+ L
Sbjct: 462 DECLSGPCPTGASCLDLPGAFSCLCPSGFTGHLCEVPL 499
Score = 115 (45.5 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 26/63 (41%), Positives = 34/63 (53%)
Query: 41 ECLED--KCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLD--LQVPQFNGSSYLR 96
+C ED +C +PC +GG+C PGS +C C GF G CQ +D L P G+S L
Sbjct: 418 QCEEDINECASSPCANGGQCQDQPGSFHCECLPGFEGPHCQAEVDECLSGPCPTGASCLD 477
Query: 97 YQG 99
G
Sbjct: 478 LPG 480
Score = 112 (44.5 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 18/37 (48%), Positives = 22/37 (59%)
Query: 45 DKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTR 81
D C PC +GG C+ PG+S CLC GF G C+ R
Sbjct: 637 DHCASAPCLNGGACVNRPGTSSCLCAAGFQGPHCEER 673
Score = 106 (42.4 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 18/41 (43%), Positives = 25/41 (60%)
Query: 40 KEC-LEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQ 79
++C L+D C+ PC +GG C+ T CLCP GF G C+
Sbjct: 23 EQCQLQDFCSANPCINGGVCLATHPQIQCLCPPGFEGHACE 63
Score = 102 (41.0 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 22/62 (35%), Positives = 28/62 (45%)
Query: 42 CLED--KCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLD--LQVPQFNGSSYLRY 97
C E+ C+ PC +GG C +P C CP TG CQT D P NG + +
Sbjct: 594 CSEEVTACHSGPCLNGGSCSPSPRGYSCTCPPSHTGPRCQTSTDHCASAPCLNGGACVNR 653
Query: 98 QG 99
G
Sbjct: 654 PG 655
Score = 100 (40.3 bits), Expect = 0.00095, Sum P(2) = 0.00095
Identities = 31/92 (33%), Positives = 41/92 (44%)
Query: 43 LEDKCNKTPCEHGGKCITTP--GSSYCLCPLGFTGDLCQTRLD-LQVPQFNGSSYLRYQG 99
+ED C PC +C T P GS+ CLC G++G C LD Q+ Q G S + G
Sbjct: 263 MEDMCLSQPCHGEAQCSTNPLTGSTLCLCQPGYSGPTCHQDLDECQMAQ-QGPSPCEHGG 321
Query: 100 LGEQYLSLLDLTIVFKAIEPNGILLYNGHRAD 131
S L+ F + P G Y G R +
Sbjct: 322 ------SCLNTPGSFNCLCPPG---YTGSRCE 344
Score = 74 (31.1 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 247 LGEAIQGVNVVNCA---HPCITQPCGS-GSCVPLYDGYKCVC 284
L + G N NC+ + C +QPC + G+C P GY C C
Sbjct: 821 LCQCAPGYNGQNCSKESNACQSQPCHNHGTCTPKPGGYYCTC 862
Score = 71 (30.1 bits), Expect = 7.8e-07, Sum P(2) = 7.8e-07
Identities = 18/56 (32%), Positives = 27/56 (48%)
Query: 249 EAIQGVNVVNC---AHPCITQPCGSG-SCVPLYDGYKCVCTQSCKESHLTEV-MCA 299
E + G +C C++ PC +G SC+ L + C+C HL EV +CA
Sbjct: 447 ECLPGFEGPHCQAEVDECLSGPCPTGASCLDLPGAFSCLCPSGFT-GHLCEVPLCA 501
Score = 70 (29.7 bits), Expect = 9.9e-07, Sum P(2) = 9.9e-07
Identities = 19/60 (31%), Positives = 30/60 (50%)
Query: 252 QGVNVVNCAHPCITQPCGSGS-CVPLYDGYKCVCT-----QSC-KESHLTEVMCASFDHG 304
QG + +PC ++PC G+ C+ +GY C C Q+C KES+ + +HG
Sbjct: 791 QGSTCQDRVNPCESRPCQHGATCIAQPNGYLCQCAPGYNGQNCSKESNACQSQ-PCHNHG 849
Score = 68 (29.0 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 20/46 (43%), Positives = 22/46 (47%)
Query: 263 CITQPC-GSGSCVPLYDGYKCVCTQSCKESHLTEVMC-ASFDHGAS 306
C + PC GSC P GY C +C SH T C S DH AS
Sbjct: 601 CHSGPCLNGGSCSPSPRGYSC----TCPPSH-TGPRCQTSTDHCAS 641
Score = 65 (27.9 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 11/23 (47%), Positives = 13/23 (56%)
Query: 263 CITQPCG-SGSCVPLYDGYKCVC 284
CI+ PC G+C P GY C C
Sbjct: 563 CISVPCAHGGTCHPQPSGYNCTC 585
Score = 53 (23.7 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 14/31 (45%), Positives = 16/31 (51%)
Query: 262 PCITQPCG-SGSCV-----PLYDGYKCVCTQ 286
PC +QPC GSC PL G+ C C Q
Sbjct: 917 PCQSQPCSHGGSCETTAGPPL--GFTCHCPQ 945
Score = 51 (23.0 bits), Expect = 8.7e-05, Sum P(2) = 8.7e-05
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 263 CITQPCGSGSCVPLYDGYKCVCTQSCKESH 292
C Q C S C L+DGY C +C ++
Sbjct: 1097 CHPQ-CDSAEC--LFDGYDCETPPACTPAY 1123
Score = 48 (22.0 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 13/33 (39%), Positives = 16/33 (48%)
Query: 260 AHPCITQPCGSGSCVPLYDGYKCVCTQS-CKES 291
AH C+ P GS C P+ D C C C+ S
Sbjct: 515 AH-CLC-PDGSPGCAPIEDN--CTCHHGHCQRS 543
Score = 47 (21.6 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 263 CITQPC---GSGSCVPLYDGYKCVC 284
C+ +PC G+ +C L + + C C
Sbjct: 878 CLDRPCHPTGTAACHSLANAFYCQC 902
>UNIPROTKB|E7ETA5 [details] [associations]
symbol:NRXN1 "Neurexin-1-beta" species:9606 "Homo sapiens"
[GO:0007269 "neurotransmitter secretion" evidence=IEA] [GO:0007416
"synapse assembly" evidence=IEA] [GO:0051965 "positive regulation
of synapse assembly" evidence=IEA] [GO:0090129 "positive regulation
of synapse maturation" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR000742 InterPro:IPR027158
PROSITE:PS50026 SMART:SM00181 GO:GO:0016021 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025 Pfam:PF02210
InterPro:IPR003585 SMART:SM00294 PANTHER:PTHR10127:SF309
EMBL:AC007462 EMBL:AC007682 EMBL:AC009234 EMBL:AC068725
EMBL:AC069550 EMBL:AC078994 EMBL:AC068715 HGNC:HGNC:8008
ChiTaRS:NRXN1 EMBL:AC007560 IPI:IPI00892553
ProteinModelPortal:E7ETA5 SMR:E7ETA5 Ensembl:ENST00000401710
ArrayExpress:E7ETA5 Bgee:E7ETA5 Uniprot:E7ETA5
Length = 495
Score = 148 (57.2 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 43/160 (26%), Positives = 77/160 (48%)
Query: 35 IKGRSKECLEDKCNKTPCEHGGKCITTPGSSYCLCPL-GFTGDLCQTRLDLQVPQFNGSS 93
++G S C ED C+ G C+ C C + F+G LC + G
Sbjct: 98 LQGPSTTCQEDSCSNQ-----GVCLQQWDGFSCDCSMTSFSGPLCNDPGTTYIFS-KGGG 151
Query: 94 YLRYQGL-GEQYLSLLD-LTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFD 151
+ Y+ ++ + D L I F ++ +L+ + G+GD++ L+++ + F+
Sbjct: 152 QITYKWPPNDRPSTRADRLAIGFSTVQKEAVLV-RVDSSSGLGDYLELHIHQGKIGVKFN 210
Query: 152 LGTGAATLRSSNPI-SLGEWHKLRLTRTGRHAYLQVDRFP 190
+GT + SN I + G++H +R TR+G +A LQVD +P
Sbjct: 211 VGTDDIAIEESNAIINDGKYHVVRFTRSGGNATLQVDSWP 250
>UNIPROTKB|F1PLX4 [details] [associations]
symbol:NOTCH4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0005509 "calcium ion
binding" evidence=IEA] InterPro:IPR002110 InterPro:IPR000742
InterPro:IPR000800 InterPro:IPR001881 InterPro:IPR010660
InterPro:IPR011656 InterPro:IPR018097 Pfam:PF00008 Pfam:PF00066
Pfam:PF06816 Pfam:PF07645 Pfam:PF07684 PRINTS:PR01452
PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS50088 PROSITE:PS50258
SMART:SM00004 SMART:SM00179 SMART:SM00181 SMART:SM00248
InterPro:IPR000152 GO:GO:0016021 GO:GO:0007275 GO:GO:0030154
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0007219 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 PROSITE:PS00010 Pfam:PF12661
GeneTree:ENSGT00690000101660 SUPFAM:SSF90193 OMA:ACPQAHT
InterPro:IPR022355 PRINTS:PR01987 EMBL:AAEX03008227
EMBL:AAEX03008228 Ensembl:ENSCAFT00000001228 Uniprot:F1PLX4
Length = 1822
Score = 132 (51.5 bits), Expect = 4.6e-07, Sum P(2) = 4.6e-07
Identities = 26/57 (45%), Positives = 33/57 (57%)
Query: 41 ECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLD--LQVPQFNGSSYL 95
EC + +PCEHGG C+ TPGS CLCP G+TG C+ + L P GS+ L
Sbjct: 429 ECQMAQQGPSPCEHGGSCLNTPGSFNCLCPPGYTGSRCEADHNECLSQPCHPGSTCL 485
Score = 115 (45.5 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 19/38 (50%), Positives = 23/38 (60%)
Query: 45 DKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRL 82
D+C PC G C+ PG+ CLCP GFTG LC+ L
Sbjct: 585 DECLSGPCPTGASCLDLPGAFSCLCPSGFTGHLCEVPL 622
Score = 115 (45.5 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 26/63 (41%), Positives = 34/63 (53%)
Query: 41 ECLED--KCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLD--LQVPQFNGSSYLR 96
+C ED +C +PC +GG+C PGS +C C GF G CQ +D L P G+S L
Sbjct: 541 QCEEDINECASSPCANGGQCQDQPGSFHCECLPGFEGPHCQAEVDECLSGPCPTGASCLD 600
Query: 97 YQG 99
G
Sbjct: 601 LPG 603
Score = 112 (44.5 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 18/37 (48%), Positives = 22/37 (59%)
Query: 45 DKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTR 81
D C PC +GG C+ PG+S CLC GF G C+ R
Sbjct: 762 DHCASAPCLNGGACVNRPGTSSCLCAAGFQGPHCEER 798
Score = 106 (42.4 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 18/41 (43%), Positives = 25/41 (60%)
Query: 40 KEC-LEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQ 79
++C L+D C+ PC +GG C+ T CLCP GF G C+
Sbjct: 146 EQCQLQDFCSANPCINGGVCLATHPQIQCLCPPGFEGHACE 186
Score = 102 (41.0 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 22/62 (35%), Positives = 28/62 (45%)
Query: 42 CLED--KCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLD--LQVPQFNGSSYLRY 97
C E+ C+ PC +GG C +P C CP TG CQT D P NG + +
Sbjct: 719 CSEEVTACHSGPCLNGGSCSPSPRGYSCTCPPSHTGPRCQTSTDHCASAPCLNGGACVNR 778
Query: 98 QG 99
G
Sbjct: 779 PG 780
Score = 74 (31.1 bits), Expect = 4.6e-07, Sum P(2) = 4.6e-07
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 247 LGEAIQGVNVVNCA---HPCITQPCGS-GSCVPLYDGYKCVC 284
L + G N NC+ + C +QPC + G+C P GY C C
Sbjct: 946 LCQCAPGYNGQNCSKESNACQSQPCHNHGTCTPKPGGYYCTC 987
Score = 71 (30.1 bits), Expect = 9.4e-07, Sum P(2) = 9.4e-07
Identities = 18/56 (32%), Positives = 27/56 (48%)
Query: 249 EAIQGVNVVNC---AHPCITQPCGSG-SCVPLYDGYKCVCTQSCKESHLTEV-MCA 299
E + G +C C++ PC +G SC+ L + C+C HL EV +CA
Sbjct: 570 ECLPGFEGPHCQAEVDECLSGPCPTGASCLDLPGAFSCLCPSGFT-GHLCEVPLCA 624
Score = 70 (29.7 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 19/60 (31%), Positives = 30/60 (50%)
Query: 252 QGVNVVNCAHPCITQPCGSGS-CVPLYDGYKCVCT-----QSC-KESHLTEVMCASFDHG 304
QG + +PC ++PC G+ C+ +GY C C Q+C KES+ + +HG
Sbjct: 916 QGSTCQDRVNPCESRPCQHGATCIAQPNGYLCQCAPGYNGQNCSKESNACQSQ-PCHNHG 974
Score = 68 (29.0 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 20/46 (43%), Positives = 22/46 (47%)
Query: 263 CITQPC-GSGSCVPLYDGYKCVCTQSCKESHLTEVMC-ASFDHGAS 306
C + PC GSC P GY C +C SH T C S DH AS
Sbjct: 726 CHSGPCLNGGSCSPSPRGYSC----TCPPSH-TGPRCQTSTDHCAS 766
Score = 65 (27.9 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 11/23 (47%), Positives = 13/23 (56%)
Query: 263 CITQPCG-SGSCVPLYDGYKCVC 284
CI+ PC G+C P GY C C
Sbjct: 688 CISVPCAHGGTCHPQPSGYNCTC 710
Score = 53 (23.7 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 14/31 (45%), Positives = 16/31 (51%)
Query: 262 PCITQPCG-SGSCV-----PLYDGYKCVCTQ 286
PC +QPC GSC PL G+ C C Q
Sbjct: 1042 PCQSQPCSHGGSCETTAGPPL--GFTCHCPQ 1070
Score = 51 (23.0 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 263 CITQPCGSGSCVPLYDGYKCVCTQSCKESH 292
C Q C S C L+DGY C +C ++
Sbjct: 1222 CHPQ-CDSAEC--LFDGYDCETPPACTPAY 1248
Score = 47 (21.6 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 263 CITQPC---GSGSCVPLYDGYKCVC 284
C+ +PC G+ +C L + + C C
Sbjct: 1003 CLDRPCHPTGTAACHSLANAFYCQC 1027
Score = 46 (21.3 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 260 AHPCITQPCGSGSCVPLYDGYKCVCTQS-CKESHLTEVMC 298
AH C+ P GS C P+ D C C C+ + + +C
Sbjct: 638 AH-CLC-PDGSPGCAPIEDN--CTCHHGHCQRTR-SSCVC 672
>UNIPROTKB|H7BZC7 [details] [associations]
symbol:NRXN2 "Neurexin-2" species:9606 "Homo sapiens"
[GO:0007269 "neurotransmitter secretion" evidence=IEA] [GO:0007416
"synapse assembly" evidence=IEA] InterPro:IPR027160
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025
Pfam:PF02210 EMBL:AP001462 HGNC:HGNC:8009 ChiTaRS:NRXN2
PANTHER:PTHR10127:SF307 EMBL:AP001092 ProteinModelPortal:H7BZC7
Ensembl:ENST00000442300 Bgee:H7BZC7 Uniprot:H7BZC7
Length = 293
Score = 143 (55.4 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 45/181 (24%), Positives = 82/181 (45%)
Query: 72 GFTGDLCQTRLDLQ--VPQFNGSSYLRYQGLGEQYLSLLD-LTIVFKAIEPNGILLYNGH 128
G GD+ Q + V F G+ + Y S D +T+ F+ ++ NG++L+ G
Sbjct: 44 GGAGDVHQPTKGKEEFVATFKGNEFFCYDLSHNPIQSSTDEITLAFRTLQRNGLMLHTGK 103
Query: 129 RADGVGDFIALYLNDRYVDFTFDLGTGA--ATLRSSN-PISLGEWHKLRLTRTGRHAYLQ 185
AD ++ L L V +LG+GA A + N + WH +R+TR R +
Sbjct: 104 SAD----YVNLSLKSGAVWLVINLGSGAFEALVEPVNGKFNDNAWHDVRVTRNLRQVTIS 159
Query: 186 VDRFPSSQILSPGPFTQXXXXXXXXXGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELN 245
VD ++ + +T GG P+ + P + ++F+GC++ V+ N++
Sbjct: 160 VDGILTTTGYTQEDYTMLGSDDFFYIGGSPNTADL-PGSPVSNNFMGCLKDVVYKNNDFK 218
Query: 246 I 246
+
Sbjct: 219 L 219
>UNIPROTKB|Q9UM47 [details] [associations]
symbol:NOTCH3 "Neurogenic locus notch homolog protein 3"
species:9606 "Homo sapiens" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0030900 "forebrain development" evidence=IEA] [GO:0045665
"negative regulation of neuron differentiation" evidence=IEA]
[GO:0048661 "positive regulation of smooth muscle cell
proliferation" evidence=IEA] [GO:0048663 "neuron fate commitment"
evidence=IEA] [GO:0072104 "glomerular capillary formation"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0000139 "Golgi membrane" evidence=TAS] [GO:0005576
"extracellular region" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005789 "endoplasmic reticulum membrane"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0005886
"plasma membrane" evidence=TAS] [GO:0006367 "transcription
initiation from RNA polymerase II promoter" evidence=TAS]
[GO:0007219 "Notch signaling pathway" evidence=TAS] [GO:0007220
"Notch receptor processing" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] Reactome:REACT_2001 Reactome:REACT_691
Reactome:REACT_71 InterPro:IPR002110 InterPro:IPR000742
InterPro:IPR000800 InterPro:IPR001881 InterPro:IPR008297
InterPro:IPR010660 InterPro:IPR011656 InterPro:IPR018097
InterPro:IPR022331 Pfam:PF00008 Pfam:PF00066 Pfam:PF06816
Pfam:PF07645 Pfam:PF07684 PIRSF:PIRSF002279 PRINTS:PR01452
PRINTS:PR01986 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS50088
PROSITE:PS50258 SMART:SM00004 SMART:SM00179 SMART:SM00181
SMART:SM00248 InterPro:IPR000152 GO:GO:0016021 GO:GO:0005829
GO:GO:0005886 Reactome:REACT_111102 GO:GO:0005576 GO:GO:0005654
GO:GO:0000139 GO:GO:0006355 GO:GO:0005789 eggNOG:COG0666
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0048661 GO:GO:0030900 GO:GO:0045665
GO:GO:0007219 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
PROSITE:PS01186 GO:GO:0007220 GO:GO:0042246 PROSITE:PS00010
GO:GO:0006367 GO:GO:0048663 GO:GO:0072104 Reactome:REACT_2155
Pfam:PF12661 SUPFAM:SSF90193 HOGENOM:HOG000234369
HOVERGEN:HBG052650 KO:K02599 InterPro:IPR024600 Pfam:PF11936
EMBL:U97669 EMBL:AF058900 EMBL:AF058881 EMBL:AF058882 EMBL:AF058883
EMBL:AF058884 EMBL:AF058885 EMBL:AF058886 EMBL:AF058887
EMBL:AF058888 EMBL:AF058889 EMBL:AF058890 EMBL:AF058891
EMBL:AF058892 EMBL:AF058893 EMBL:AF058894 EMBL:AF058895
EMBL:AF058896 EMBL:AF058897 EMBL:AF058898 EMBL:AF058899
EMBL:AC004257 EMBL:AC004663 IPI:IPI00029819 PIR:S78549
RefSeq:NP_000426.2 UniGene:Hs.8546 ProteinModelPortal:Q9UM47
SMR:Q9UM47 IntAct:Q9UM47 MINT:MINT-2822317 STRING:Q9UM47
PhosphoSite:Q9UM47 DMDM:20139284 PaxDb:Q9UM47 PRIDE:Q9UM47
Ensembl:ENST00000263388 GeneID:4854 KEGG:hsa:4854 UCSC:uc002nan.3
CTD:4854 GeneCards:GC19M015270 H-InvDB:HIX0040142
H-InvDB:HIX0174419 HGNC:HGNC:7883 HPA:CAB005393 MIM:125310
MIM:600276 neXtProt:NX_Q9UM47 Orphanet:136 PharmGKB:PA31685
InParanoid:Q9UM47 OMA:LTFTCHC OrthoDB:EOG4C2H8K PhylomeDB:Q9UM47
GenomeRNAi:4854 NextBio:18698 ArrayExpress:Q9UM47 Bgee:Q9UM47
CleanEx:HS_NOTCH3 Genevestigator:Q9UM47 GermOnline:ENSG00000074181
Uniprot:Q9UM47
Length = 2321
Score = 130 (50.8 bits), Expect = 4.9e-07, Sum P(2) = 4.9e-07
Identities = 23/45 (51%), Positives = 28/45 (62%)
Query: 36 KGRSKECLEDKCNK-TPCEHGGKCITTPGSSYCLCPLGFTGDLCQ 79
+GRS D+C PC HGG C+ TPGS C CP G+TG LC+
Sbjct: 151 QGRSCRSDVDECRVGEPCRHGGTCLNTPGSFRCQCPAGYTGPLCE 195
Score = 119 (46.9 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 20/45 (44%), Positives = 30/45 (66%)
Query: 37 GRSKECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTR 81
G + L D C++ PC++GG+C+ T +YCLCP G++G LC R
Sbjct: 994 GPQCQTLVDWCSRQPCQNGGRCVQT--GAYCLCPPGWSGRLCDIR 1036
Score = 118 (46.6 bits), Expect = 9.7e-05, Sum P(2) = 9.7e-05
Identities = 22/50 (44%), Positives = 28/50 (56%)
Query: 35 IKGRSKECLEDKCNKTPCEHGGKCITTPGS-SYCLCPLGFTGDLCQTRLD 83
++GR E L C PCEHGG+C + PG C CP G+ G CQ +D
Sbjct: 764 VQGRQCELLSP-CTPNPCEHGGRCESAPGQLPVCSCPQGWQGPRCQQDVD 812
Score = 109 (43.4 bits), Expect = 8.3e-05, Sum P(2) = 8.3e-05
Identities = 19/47 (40%), Positives = 23/47 (48%)
Query: 37 GRSKECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLD 83
G E D+C PC HGGKC+ C CP G TG C+ +D
Sbjct: 576 GTRCESQVDECRSQPCRHGGKCLDLVDKYLCRCPSGTTGVNCEVNID 622
Score = 106 (42.4 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 18/38 (47%), Positives = 24/38 (63%)
Query: 45 DKCN--KTPCEHGGKCITTPGSSYCLCPLGFTGDLCQT 80
D+C+ PCEH G+C+ T GS C C G+TG C+T
Sbjct: 393 DECSIGANPCEHLGRCVNTQGSFLCQCGRGYTGPRCET 430
Score = 106 (42.4 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 17/39 (43%), Positives = 21/39 (53%)
Query: 45 DKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLD 83
D+C TPC +G KC+ P C C GF G LC +D
Sbjct: 509 DECASTPCRNGAKCVDQPDGYECRCAEGFEGTLCDRNVD 547
Score = 100 (40.3 bits), Expect = 0.00074, Sum P(2) = 0.00073
Identities = 19/50 (38%), Positives = 25/50 (50%)
Query: 45 DKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLD--LQVPQFNGS 92
D+C +PC +GG C C CP GF+G CQ +D P NG+
Sbjct: 471 DECQSSPCVNGGVCKDRVNGFSCTCPSGFSGSTCQLDVDECASTPCRNGA 520
Score = 78 (32.5 bits), Expect = 4.9e-07, Sum P(2) = 4.9e-07
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 260 AHPCITQPCGSGSCVPLYDGYKCVC 284
+HPC +PC G C G++CVC
Sbjct: 696 SHPCAHEPCSHGICYDAPGGFRCVC 720
Score = 75 (31.5 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 13/39 (33%), Positives = 21/39 (53%)
Query: 253 GVNVVNCAH---PCITQPC-GSGSCVPLYDGYKCVCTQS 287
G +C H PC+++PC G C + G++C C +S
Sbjct: 953 GYTGAHCQHEADPCLSRPCLHGGVCSAAHPGFRCTCLES 991
Score = 71 (30.1 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 16/40 (40%), Positives = 19/40 (47%)
Query: 249 EAIQGVNVVNC---AHPCITQPCG-SGSCVPLYDGYKCVC 284
E + G N NC C +QPC GSC+ L Y C C
Sbjct: 1109 ECLPGYNGDNCEDDVDECASQPCQHGGSCIDLVARYLCSC 1148
Score = 69 (29.3 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05
Identities = 11/23 (47%), Positives = 16/23 (69%)
Query: 263 CITQPCGSG-SCVPLYDGYKCVC 284
C + PCG G SCV +G++C+C
Sbjct: 661 CASSPCGEGGSCVDGENGFRCLC 683
Score = 68 (29.0 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 17/50 (34%), Positives = 22/50 (44%)
Query: 262 PCITQPCG-SGSCVPLYDGYKCVCTQSCKESHLTEVM--CAS--FDHGAS 306
PC+ QPC G+C GY C C + + + CAS HG S
Sbjct: 1087 PCLAQPCQHGGTCRGYMGGYMCECLPGYNGDNCEDDVDECASQPCQHGGS 1136
Score = 65 (27.9 bits), Expect = 3.5e-05, Sum P(3) = 3.5e-05
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 263 CITQPCGSGS-CVPLYDGYKCVCTQ 286
C + PC +G+ CV DGY+C C +
Sbjct: 511 CASTPCRNGAKCVDQPDGYECRCAE 535
Score = 64 (27.6 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 21/88 (23%), Positives = 31/88 (35%)
Query: 249 EAIQGVNVVNCAHPCITQPCGSGSCVPLYDGYKCVC----TQSCKESHLTEVMCASFDHG 304
E +G C PC G CV + C C T + ES + E HG
Sbjct: 535 EGFEGTLCDRNVDDCSPDPCHHGRCVDGIASFSCACAPGYTGTRCESQVDECRSQPCRHG 594
Query: 305 ASFLHYLDPEIIHS-SGLLHYKFQLHVD 331
L +D + SG ++++D
Sbjct: 595 GKCLDLVDKYLCRCPSGTTGVNCEVNID 622
Score = 62 (26.9 bits), Expect = 6.9e-05, Sum P(3) = 6.9e-05
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 263 CITQPCGSGSCVPLYDGYKCVC 284
C++ PCG G+C + C C
Sbjct: 891 CLSNPCGPGTCTDHVASFTCTC 912
Score = 58 (25.5 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 13/35 (37%), Positives = 15/35 (42%)
Query: 253 GVNVVNCA---HPCITQPCGSGSCVPLYDGYKCVC 284
G VNC C + PC G C + Y CVC
Sbjct: 611 GTTGVNCEVNIDDCASNPCTFGVCRDGINRYDCVC 645
Score = 54 (24.1 bits), Expect = 0.00043, Sum P(4) = 0.00043
Identities = 16/52 (30%), Positives = 24/52 (46%)
Query: 263 CITQP--C-GSGSCVPLYDGYKCVCT-----QSCKESHLTEVMCASFDHGAS 306
C QP C G+C G+ CVC +SC ++ + + A HGA+
Sbjct: 278 CQLQPNACHNGGTCFNTLGGHSCVCVNGWTGESCSQN-IDDCATAVCFHGAT 328
Score = 53 (23.7 bits), Expect = 0.00053, Sum P(3) = 0.00053
Identities = 11/27 (40%), Positives = 13/27 (48%)
Query: 263 CITQPC-GSGSC--VPLYDGYKCVCTQ 286
C PC GSC PL ++C C Q
Sbjct: 1339 CAAAPCLHGGSCRPAPLAPFFRCACAQ 1365
Score = 51 (23.0 bits), Expect = 0.00066, Sum P(3) = 0.00066
Identities = 12/29 (41%), Positives = 13/29 (44%)
Query: 258 NCAHPCITQPC-GSGSCVPLYD-GYKCVC 284
N A PC PC G+C D Y C C
Sbjct: 196 NPAVPCAPSPCRNGGTCRQSGDLTYDCAC 224
Score = 51 (23.0 bits), Expect = 0.00066, Sum P(3) = 0.00066
Identities = 14/43 (32%), Positives = 18/43 (41%)
Query: 254 VNVVNC-AHPCITQPCGSGSCVPLYDGYKCVCTQSCKESHLTE 295
VNV +C H C+ G+CV + Y C C TE
Sbjct: 235 VNVDDCPGHRCLN----GGTCVDGVNTYNCQCPPEWTGQFCTE 273
Score = 51 (23.0 bits), Expect = 0.00083, Sum P(3) = 0.00083
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 270 SGSCVPLYDGYKCVC 284
+G+CV L G++C C
Sbjct: 1179 NGTCVDLVGGFRCTC 1193
Score = 42 (19.8 bits), Expect = 0.00043, Sum P(4) = 0.00043
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 428 EFKCLSIQRLHRTGKQCLIRIDTDYSMQSISGG 460
+F C+ + TG C + ID S ++GG
Sbjct: 452 QFTCICMAGF--TGTYCEVDIDECQSSPCVNGG 482
Score = 41 (19.5 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05
Identities = 7/15 (46%), Positives = 8/15 (53%)
Query: 248 GEAIQGVNVVNCAHP 262
G + GVN NC P
Sbjct: 249 GTCVDGVNTYNCQCP 263
>ZFIN|ZDB-GENE-030616-78 [details] [associations]
symbol:celsr1a "cadherin EGF LAG seven-pass G-type
receptor 1a" species:7955 "Danio rerio" [GO:0004930 "G-protein
coupled receptor activity" evidence=IEA] [GO:0005509 "calcium ion
binding" evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0007156
"homophilic cell adhesion" evidence=IEA] [GO:0007218 "neuropeptide
signaling pathway" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0004888 "transmembrane signaling receptor
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007166 "cell surface receptor signaling pathway" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0007165
"signal transduction" evidence=IEA] [GO:0042074 "cell migration
involved in gastrulation" evidence=IGI;IMP] InterPro:IPR000203
InterPro:IPR000742 InterPro:IPR000832 InterPro:IPR001879
InterPro:IPR002126 InterPro:IPR015919 InterPro:IPR017981
InterPro:IPR020894 Pfam:PF00002 Pfam:PF00028 Pfam:PF01825
Pfam:PF02793 PRINTS:PR00205 PRINTS:PR00249 PROSITE:PS00232
PROSITE:PS50026 PROSITE:PS50221 PROSITE:PS50227 PROSITE:PS50261
PROSITE:PS50268 SMART:SM00008 SMART:SM00112 SMART:SM00181
SMART:SM00303 ZFIN:ZDB-GENE-030616-78 GO:GO:0016021 GO:GO:0005886
GO:GO:0004930 GO:GO:0007218 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 GO:GO:0007156
SUPFAM:SSF49313 InterPro:IPR022624 Pfam:PF12003 Gene3D:2.60.40.60
GeneTree:ENSGT00700000104170 Pfam:PF02210 EMBL:CU855579
EMBL:AL645790 IPI:IPI00998840 Ensembl:ENSDART00000123617
ArrayExpress:F1QKG4 Bgee:F1QKG4 Uniprot:F1QKG4
Length = 2699
Score = 165 (63.1 bits), Expect = 6.1e-07, Sum P(2) = 6.1e-07
Identities = 43/151 (28%), Positives = 75/151 (49%)
Query: 33 NKIKGRSKECLED----KCNKTPCEHGGKCITT-PGSSYCLCPLG-FTGDLCQTRLDLQV 86
N ++ R + C D +C C++GG+C+ G C CP G + C+ +
Sbjct: 1096 NGLRCRCENCEVDSRSGRCVPGVCKNGGECVNLLVGGFTCNCPSGEYEKPFCE----MTT 1151
Query: 87 PQFNGSSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYV 146
F G S++ ++GL +++ ++ +F E N +LLYNG R + DFIA+ + + +
Sbjct: 1152 RSFPGQSFITFRGLRQRFH--FTVSFMFATRERNALLLYNG-RFNEKHDFIAVEIIEEQI 1208
Query: 147 DFTFDLGTGAATLRSSNP--ISLGEWHKLRL 175
TF G T+ P +S G+WH ++L
Sbjct: 1209 QLTFSAGESKTTVAPFVPGGVSDGQWHSVQL 1239
Score = 48 (22.0 bits), Expect = 7.0e-07, Sum P(3) = 7.0e-07
Identities = 12/33 (36%), Positives = 15/33 (45%)
Query: 258 NCAHPCITQPCGS-GSCV--PLYD-GYKCVCTQ 286
+C C PC +CV P GY C C+Q
Sbjct: 1580 DCVDACHLNPCEHLSTCVRKPSSSHGYTCECSQ 1612
Score = 42 (19.8 bits), Expect = 6.1e-07, Sum P(2) = 6.1e-07
Identities = 6/12 (50%), Positives = 9/12 (75%)
Query: 394 KINNGVWHRLTV 405
++N+G WH L V
Sbjct: 1445 RVNDGEWHHLLV 1456
Score = 40 (19.1 bits), Expect = 7.0e-07, Sum P(3) = 7.0e-07
Identities = 8/14 (57%), Positives = 11/14 (78%)
Query: 222 PKVKIKSSFIGCIQ 235
P +K+KS FIG +Q
Sbjct: 1491 PGLKLKSFFIGGLQ 1504
WARNING: HSPs involving 191 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.138 0.434 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 533 512 0.00087 119 3 11 22 0.37 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 441
No. of states in DFA: 622 (66 KB)
Total size of DFA: 342 KB (2170 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 40.34u 0.10s 40.44t Elapsed: 00:00:01
Total cpu time: 40.47u 0.10s 40.57t Elapsed: 00:00:02
Start: Thu Aug 15 14:22:01 2013 End: Thu Aug 15 14:22:03 2013
WARNINGS ISSUED: 2