RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy5025
(533 letters)
>d1pz7a_ b.29.1.4 (A:) Agrin {Chicken (Gallus gallus) [TaxId: 9031]}
Length = 195
Score = 123 bits (308), Expect = 3e-33
Identities = 50/192 (26%), Positives = 88/192 (45%), Gaps = 16/192 (8%)
Query: 83 DLQVPQFNGSSYLRYQGLGEQYLSLLD--------------LTIVFKAIEPNGILLYNGH 128
D + F+G +Y+ Y + LD + K G++L++G
Sbjct: 5 DAEAIAFDGRTYMEYHNAVTKSPDALDYPAEPSEKALQSNHFELSIKTEATQGLILWSG- 63
Query: 129 RADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSNPISLGEWHKLRLTRTGRHAYLQVDR 188
+ D+IAL + D +V +DLG+ LRS+ PI+ W ++ R R LQV
Sbjct: 64 KGLERSDYIALAIVDGFVQMMYDLGSKPVVLRSTVPINTNHWTHIKAYRVQREGSLQVGN 123
Query: 189 FPSSQILSPGPFTQLSLSLSLYLGGVPDYNIVSP-KVKIKSSFIGCIQKVLINNHELNIL 247
SP TQL +L+LGG+ ++ + FIGCI+ V+++ EL+++
Sbjct: 124 EAPITGSSPLGATQLDTDGALWLGGMERLSVAHKLPKAYSTGFIGCIRDVIVDRQELHLV 183
Query: 248 GEAIQGVNVVNC 259
+A+ +++C
Sbjct: 184 EDALNNPTILHC 195
Score = 82.3 bits (202), Expect = 9e-19
Identities = 43/207 (20%), Positives = 84/207 (40%), Gaps = 41/207 (19%)
Query: 299 ASFDHGASFLHYLDPEIIHSSGLLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTG 358
+FD G +++ Y + L + + + ++ IKT ++ GLILW+G
Sbjct: 9 IAFD-GRTYMEYHNAVTKSPDALDYPAEPSEKALQ----SNHFELSIKTEATQGLILWSG 63
Query: 359 SS-QSKDFLALGIHNGYAHVMYNLGNGEVLLENNQTKINNGVWHRLTVHRNFMVVMHGSS 417
+ D++AL I +G+ +MY+LG+ V+L + IN W + +R
Sbjct: 64 KGLERSDYIALAIVDGFVQMMYDLGSKPVVLRSTV-PINTNHWTHIKAYRV--------- 113
Query: 418 HTRSNKSSKIEFKCLSIQRLHRTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVE 477
++ +++ + + S QL+TD L++GG+E
Sbjct: 114 -----------------------QREGSLQVGNEAPITGSSPLGATQLDTDGALWLGGME 150
Query: 478 DIEELTR--SKYHHSFKGWISNLILSN 502
+ + Y F G I ++I+
Sbjct: 151 RLSVAHKLPKAYSTGFIGCIRDVIVDR 177
>d1dyka1 b.29.1.4 (A:2744-2932) Laminin alpha2 chain {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 189
Score = 111 bits (278), Expect = 4e-29
Identities = 38/171 (22%), Positives = 74/171 (43%), Gaps = 4/171 (2%)
Query: 89 FNGSSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDF 148
+ +S++ + + L + + + +G+L Y DF + L + + F
Sbjct: 21 LSRNSHIAIAFDDTKVKNRLTIELEVRTEAESGLLFYMARI--NHADFATVQLRNGFPYF 78
Query: 149 TFDLGTGAATLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQLSLSLS 208
++DLG+G + I+ G+WHK+++ R + L VD S I SP L +
Sbjct: 79 SYDLGSGDTSTMIPTKINDGQWHKIKIVRVKQEGILYVDDASSQTI-SPKKADILDVVGI 137
Query: 209 LYLGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNC 259
LY+GG+P + S GC++ + + ++ L + +V C
Sbjct: 138 LYVGGLPINYTTRRIGPVTYSLDGCVRNLHMEQAPVD-LDQPTSSFHVGTC 187
Score = 73.7 bits (180), Expect = 7e-16
Identities = 43/197 (21%), Positives = 77/197 (39%), Gaps = 38/197 (19%)
Query: 327 QLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYNLGNGEV 386
+ D I++ ++T + SGL+ + DF + + NG+ + Y+LG+G+
Sbjct: 28 AIAFDDTKVKNRLTIELEVRTEAESGLLFYMARINHADFATVQLRNGFPYFSYDLGSGDT 87
Query: 387 LLENNQTKINNGVWHRLTVHRNFMVVMHGSSHTRSNKSSKIEFKCLSIQRLHRTGKQCLI 446
TKIN+G WH++ + R ++ ++
Sbjct: 88 -STMIPTKINDGQWHKIKIVRV--------------------------------KQEGIL 114
Query: 447 RIDTDYSMQSISGGKFEQLNTDSGLYVGGVE-DIEELTRSKYHHSFKGWISNLILSNDYQ 505
+D D S Q+IS K + L+ LYVGG+ + +S G + NL +
Sbjct: 115 YVD-DASSQTISPKKADILDVVGILYVGGLPINYTTRRIGPVTYSLDGCVRNLHMEQ--- 170
Query: 506 VKLPLSRSQGSSCQLTC 522
+ L + S TC
Sbjct: 171 APVDLDQPTSSFHVGTC 187
>d1dyka2 b.29.1.4 (A:2933-3117) Laminin alpha2 chain {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 185
Score = 110 bits (275), Expect = 1e-28
Identities = 38/181 (20%), Positives = 65/181 (35%), Gaps = 15/181 (8%)
Query: 89 FNGSSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDF 148
F+G+ + + G + L L + F+ P G+LL D + + + D + F
Sbjct: 8 FDGTGFAKAVGGFKVGLDL-LVEFEFRTTRPTGVLLGVS---SQKMDGMGIEMIDEKLMF 63
Query: 149 TFDLGTGAATLRSSNPISL----GEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQLS 204
D G G T I G+WHK+ + L VD T
Sbjct: 64 HVDNGAGRFTAIYDAEIPGHMCNGQWHKVTAKKIKNRLELVVDGNQVDAQSPNSASTSAD 123
Query: 205 LSLSLYLGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNIL------GEAIQGVNVVN 258
+ +++GG P + + F GCI+ + + L ++GV V+
Sbjct: 124 TNDPVFVGGFPG-GLNQFGLTTNIRFRGCIRSLKLTKGTGKPLEVNFAKALELRGVQPVS 182
Query: 259 C 259
C
Sbjct: 183 C 183
Score = 84.9 bits (209), Expect = 1e-19
Identities = 26/204 (12%), Positives = 62/204 (30%), Gaps = 41/204 (20%)
Query: 317 HSSGLLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAH 376
+G V G + ++ +T+ +G++L S + D + + + +
Sbjct: 9 DGTGFAKAVGGFKV-----GLDLLVEFEFRTTRPTGVLLGVSSQKM-DGMGIEMIDEKLM 62
Query: 377 VMYNLGNGE---VLLENNQTKINNGVWHRLTVHRNFMVVMHGSSHTRSNKSSKIEFKCLS 433
+ G G + + NG WH++T +
Sbjct: 63 FHVDNGAGRFTAIYDAEIPGHMCNGQWHKVTAKKI------------------------- 97
Query: 434 IQRLHRTGKQCLIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVEDIEELTRSKYHHSFKG 493
+ + +D + +T+ ++VGG + F+G
Sbjct: 98 -------KNRLELVVDGNQVDAQSPNSASTSADTNDPVFVGGFPGGLNQFGLTTNIRFRG 150
Query: 494 WISNLILSNDYQVKLPLSRSQGSS 517
I +L L+ L ++ ++
Sbjct: 151 CIRSLKLTKGTGKPLEVNFAKALE 174
>d1d2sa_ b.29.1.4 (A:) Sex hormone-binding globulin {Human (Homo
sapiens) [TaxId: 9606]}
Length = 170
Score = 97.5 bits (242), Expect = 3e-24
Identities = 24/173 (13%), Positives = 61/173 (35%), Gaps = 12/173 (6%)
Query: 87 PQFNGSSYLRYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYV 146
P + + + ++ + + +P G++ Y D+ L L D
Sbjct: 10 PGQEPIAVMTFD---LTKITKTSSSFEVRTWDPEGVIFYGDTN--PKDDWFMLGLRDGRP 64
Query: 147 DFTFDLGTGAATLRSSNPISLGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQLSLS 206
+ T+ + + G WH++ + G L+VD ++
Sbjct: 65 EIQLHNHWAQLTVGAGPRLDDGRWHQVEVKMEGDSVLLEVDGEEVLRLRQVS----GHPI 120
Query: 207 LSLYLGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHELNILGEAIQGVNVVNC 259
+ + LGG+ + ++ + + GC+++ + + I A ++ +C
Sbjct: 121 MRIALGGLLF-PASNLRLPLVPALDGCLRRDSWLDKQAEI--SASAPTSLRSC 170
Score = 74.0 bits (181), Expect = 4e-16
Identities = 21/181 (11%), Positives = 58/181 (32%), Gaps = 40/181 (22%)
Query: 339 FNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYNLGNGEVLLENNQTKINNG 398
+ ++T G+I + ++ D+ LG+ +G + + ++ + ++++G
Sbjct: 28 TSSSFEVRTWDPEGVIFYGDTNPKDDWFMLGLRDGRPEIQLHNHWAQLTVGAGP-RLDDG 86
Query: 399 VWHRLTVHRNFMVVMHGSSHTRSNKSSKIEFKCLSIQRLHRTGKQCLIRIDTDYSMQSIS 458
WH++ V G L+ +D + ++
Sbjct: 87 RWHQVEVKME--------------------------------GDSVLLEVDGEEVLR--- 111
Query: 459 GGKFEQLNTDSGLYVGGVEDIEELTRSKYHHSFKGWISNLILSNDYQVKLPLSRSQGSSC 518
+ + + +GG+ R + G + + +S S +S
Sbjct: 112 -LRQVSGHPIMRIALGGLLFPASNLRLPLVPALDGCLRRDSWLDKQ---AEISASAPTSL 167
Query: 519 Q 519
+
Sbjct: 168 R 168
>d1h30a1 b.29.1.4 (A:261-451) Growth-arrest-specific protein Gas6
{Human (Homo sapiens) [TaxId: 9606]}
Length = 191
Score = 96.8 bits (240), Expect = 7e-24
Identities = 40/193 (20%), Positives = 68/193 (35%), Gaps = 22/193 (11%)
Query: 48 NKTPCEHGGKCI-TTPGSSYCLCPLGFTGDLCQTRLDLQVPQFNGSSYLRYQGLGEQYLS 106
+ CE C+ + S LG F+G+ +R + Q +
Sbjct: 13 DMDTCEDILPCVPFSVAKSVKSLYLG--------------RMFSGTPVIRLRFKRLQ-PT 57
Query: 107 LLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSNPIS 166
L F+ +P GILL+ G D +I L L ++ S I+
Sbjct: 58 RLVAEFDFRTFDPEGILLFAGGHQDS--TWIVLALRAGRLELQLRYNGVGRVTSSGPVIN 115
Query: 167 LGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQ---LSLSLSLYLGGVPDYNIVSPK 223
G W + + R+ ++V+R +I G Q L+L +GG+P +
Sbjct: 116 HGMWQTISVEELARNLVIKVNRDAVMKIAVAGDLFQPERGLYHLNLTVGGIPF-HEKDLV 174
Query: 224 VKIKSSFIGCIQK 236
I GC++
Sbjct: 175 QPINPRLDGCMRS 187
Score = 79.1 bits (194), Expect = 1e-17
Identities = 31/222 (13%), Positives = 65/222 (29%), Gaps = 44/222 (19%)
Query: 279 GYKCVCTQSCKESHLTEVMCASFDHGASFLHYLDPEIIHSSGLLHYKFQLHVDFRITGYE 338
G K E L C F S + + ++ +F+ +
Sbjct: 7 GLKLSQDMDTCEDILP---CVPFSVAKSVKSLYLGRMFSGTPVIRLRFKR-----LQPTR 58
Query: 339 FNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYNLGNGEVLLENNQTKINNG 398
+ +T G++L+ G Q ++ L + G + + + IN+G
Sbjct: 59 LVAEFDFRTFDPEGILLFAGGHQDSTWIVLALRAGRLELQLRYNGVGRVTSSGP-VINHG 117
Query: 399 VWHRLTVHRNFMVVMHGSSHTRSNKSSKIEFKCLSIQRLHRTGKQCLIRIDTDYSMQSIS 458
+W ++V + +I+++ D M+
Sbjct: 118 MWQTISVEEL--------------------------------ARNLVIKVNRDAVMKIAV 145
Query: 459 GGKF---EQLNTDSGLYVGGVEDIEELTRSKYHHSFKGWISN 497
G E+ L VGG+ E+ + G + +
Sbjct: 146 AGDLFQPERGLYHLNLTVGGIPFHEKDLVQPINPRLDGCMRS 187
>d2r1da1 b.29.1.4 (A:36-212) Ligand-binding domain of neurexin 1beta
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 177
Score = 82.6 bits (203), Expect = 5e-19
Identities = 35/160 (21%), Positives = 68/160 (42%), Gaps = 15/160 (9%)
Query: 89 FNGSSYLRYQGLGEQYLSLL--DLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYV 146
G + Y+ S L I F ++ +L+ + G+GD++ L+++ +
Sbjct: 9 SKGGGQITYKWPPNDRPSTRADRLAIGFSTVQKEAVLVRVD-SSSGLGDYLELHIHQGKI 67
Query: 147 DFTFDLGTGAATLRSSN-PISLGEWHKLRLTRTGRHAYLQVDRFPSSQILS-PGPFTQLS 204
F++GT + SN I+ G++H +R TR+G +A LQVD +P + T +
Sbjct: 68 GVKFNVGTDDIAIEESNAIINDGKYHVVRFTRSGGNATLQVDSWPVIERYPAGRQLTIFN 127
Query: 205 LSLSLYLGGVPDYNIVSPKVKIKSSFIGCIQKVLINNHEL 244
++ +GG F G + + N ++
Sbjct: 128 SQATIIIGGKE----------QGQPFQGQLSGLYYNGLKV 157
Score = 62.9 bits (152), Expect = 3e-12
Identities = 33/198 (16%), Positives = 69/198 (34%), Gaps = 45/198 (22%)
Query: 318 SSGLLHYKFQLHVDFRITGYEFNIDMRIKTSSSSGLILWTGSSQSK-DFLALGIHNGYAH 376
G + YK+ + R + + + T +++ SS D+L L IH G
Sbjct: 11 GGGQITYKWPPN--DRPSTRADRLAIGFSTVQKEAVLVRVDSSSGLGDYLELHIHQGKIG 68
Query: 377 VMYNLGNGEVLLENNQTKINNGVWHRLTVHRNFMVVMHGSSHTRSNKSSKIEFKCLSIQR 436
V +N+G ++ +E + IN+G +H + R+
Sbjct: 69 VKFNVGTDDIAIEESNAIINDGKYHVVRFTRS---------------------------- 100
Query: 437 LHRTGKQCLIRIDTDYSMQSIS-GGKFEQLNTDSGLYVGGVEDIEELTRSKYHHSFKGWI 495
G +++D+ ++ G + N+ + + +GG E F+G +
Sbjct: 101 ----GGNATLQVDSWPVIERYPAGRQLTIFNSQATIIIGGKEQ---------GQPFQGQL 147
Query: 496 SNLILSNDYQVKLPLSRS 513
S L + + +
Sbjct: 148 SGLYYNGLKVLNMAAEND 165
>d1h30a2 b.29.1.4 (A:461-678) Growth-arrest-specific protein Gas6
{Human (Homo sapiens) [TaxId: 9606]}
Length = 218
Score = 82.3 bits (202), Expect = 2e-18
Identities = 36/209 (17%), Positives = 70/209 (33%), Gaps = 37/209 (17%)
Query: 89 FNGSSYLRYQ--------GLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALY 140
+ GS + Y +G + +++ + G+L D A+
Sbjct: 20 YPGSGFAFYSLDYMRTPLDVGTESTWEVEVVAHIRPAADTGVLFALWA-----PDLRAVP 74
Query: 141 LNDRYVDFTFDLGTGAATL----------RSSNPISLGEWHKLRLTRTGRHAYLQVDRFP 190
L+ VD+ + + G+ H + ++ A L+VD
Sbjct: 75 LSVALVDYHSTKKLKKQLVVLAVEHTALALMEIKVCDGQEHVVTVSLRDGEATLEVDGTR 134
Query: 191 SSQILSPGPFTQLSLSL--------SLYLGGVPDYNIVSPKVKIKSSFIGCIQKVLINNH 242
+S + L + GG+PD + S V + + GC+ + +N
Sbjct: 135 GQSEVSAAQLQERLAVLERHLRSPVLTFAGGLPDVPVTSAPV--TAFYRGCM-TLEVNRR 191
Query: 243 ELNILGEAIQGVNVVNCAHPCIT-QPCGS 270
L+ L EA + + AH C +P +
Sbjct: 192 LLD-LDEAAYKHSDIT-AHSCPPVEPAAA 218
Score = 55.7 bits (133), Expect = 2e-09
Identities = 24/197 (12%), Positives = 56/197 (28%), Gaps = 44/197 (22%)
Query: 336 GYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGIHNGYAHVMYNLGNGEVLLENNQT-- 393
+E + I+ ++ +G++ + + L + H L V+L T
Sbjct: 44 TWEVEVVAHIRPAADTGVLFALW-APDLRAVPLSVALVDYHSTKKLKKQLVVLAVEHTAL 102
Query: 394 -----KINNGVWHRLTVHRN----FMVVMHGSSHTRSNKSSKIEFKCLSIQRLHRTGKQC 444
K+ +G H +TV + V + + +
Sbjct: 103 ALMEIKVCDGQEHVVTVSLRDGEATLEVDGTRGQSEVSAA-------------------- 142
Query: 445 LIRIDTDYSMQSISGGKFEQLNTDSGLYVGGVEDIEELTRSKYHHSFKGWISNLILSNDY 504
+Q L + + GG+ D +T + ++G ++ +
Sbjct: 143 --------QLQERLAVLERHLRSPVLTFAGGLPD-VPVTSAPVTAFYRGCMTLEVNRRLL 193
Query: 505 QVKLPLSRSQG---SSC 518
+ + SC
Sbjct: 194 DLDEAAYKHSDITAHSC 210
>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog
protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 39
Score = 48.9 bits (117), Expect = 9e-09
Identities = 10/36 (27%), Positives = 18/36 (50%)
Query: 45 DKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQT 80
++C PC++ C+ G C+C G+ G C+
Sbjct: 2 NECVSNPCQNDATCLDQIGEFQCICMPGYEGVHCEV 37
Score = 29.3 bits (66), Expect = 0.097
Identities = 6/24 (25%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Query: 262 PCITQPCGSG-SCVPLYDGYKCVC 284
C++ PC + +C+ ++C+C
Sbjct: 3 ECVSNPCQNDATCLDQIGEFQCIC 26
>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog
protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 42
Score = 49.0 bits (117), Expect = 1e-08
Identities = 19/40 (47%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
Query: 41 ECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQT 80
EC PCEH GKCI T GS C C G+TG C+
Sbjct: 5 ECS---LGANPCEHAGKCINTLGSFECQCLQGYTGPRCEI 41
Score = 24.7 bits (54), Expect = 3.6
Identities = 6/23 (26%), Positives = 9/23 (39%), Gaps = 1/23 (4%)
Query: 263 CITQPCGS-GSCVPLYDGYKCVC 284
PC G C+ ++C C
Sbjct: 8 LGANPCEHAGKCINTLGSFECQC 30
>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 39
Score = 48.5 bits (116), Expect = 1e-08
Identities = 15/35 (42%), Positives = 18/35 (51%)
Query: 45 DKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQ 79
D+C PC +GG C S C CP GF G C+
Sbjct: 4 DQCESNPCLNGGSCKDDINSYECWCPFGFEGKNCE 38
Score = 29.6 bits (67), Expect = 0.067
Identities = 9/24 (37%), Positives = 12/24 (50%), Gaps = 1/24 (4%)
Query: 262 PCITQPC-GSGSCVPLYDGYKCVC 284
C + PC GSC + Y+C C
Sbjct: 5 QCESNPCLNGGSCKDDINSYECWC 28
>d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog
protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 35
Score = 48.1 bits (115), Expect = 2e-08
Identities = 17/35 (48%), Positives = 21/35 (60%)
Query: 45 DKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQ 79
D+C +PC H G+C+ C CP GFTG LCQ
Sbjct: 1 DECASSPCLHNGRCLDKINEFQCECPTGFTGHLCQ 35
Score = 29.6 bits (67), Expect = 0.061
Identities = 7/24 (29%), Positives = 13/24 (54%), Gaps = 1/24 (4%)
Query: 262 PCITQPC-GSGSCVPLYDGYKCVC 284
C + PC +G C+ + ++C C
Sbjct: 2 ECASSPCLHNGRCLDKINEFQCEC 25
>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa)
[TaxId: 9823]}
Length = 37
Score = 48.2 bits (115), Expect = 2e-08
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 45 DKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQ 79
D+C +PC++GG C S C C F G C+
Sbjct: 3 DQCASSPCQNGGSCKDQLQSYICFCLPAFEGRNCE 37
Score = 28.9 bits (65), Expect = 0.13
Identities = 9/24 (37%), Positives = 11/24 (45%), Gaps = 1/24 (4%)
Query: 262 PCITQPCGSG-SCVPLYDGYKCVC 284
C + PC +G SC Y C C
Sbjct: 4 QCASSPCQNGGSCKDQLQSYICFC 27
>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human
(Homo sapiens) [TaxId: 9606]}
Length = 39
Score = 48.1 bits (115), Expect = 2e-08
Identities = 14/36 (38%), Positives = 19/36 (52%)
Query: 45 DKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQT 80
D+C +PC++ GKC G C C GF G C+
Sbjct: 1 DQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCEL 36
Score = 28.9 bits (65), Expect = 0.11
Identities = 9/25 (36%), Positives = 9/25 (36%), Gaps = 1/25 (4%)
Query: 262 PCITQPCG-SGSCVPLYDGYKCVCT 285
C T PC G C Y C C
Sbjct: 2 QCETSPCQNQGKCKDGLGEYTCTCL 26
>d1nqlb_ g.3.11.1 (B:) Epidermal growth factor, EGF {Human (Homo
sapiens) [TaxId: 9606]}
Length = 48
Score = 47.2 bits (112), Expect = 5e-08
Identities = 13/43 (30%), Positives = 18/43 (41%), Gaps = 4/43 (9%)
Query: 41 ECLEDKCNKTPCEHGGKCITTPGSS--YCLCPLGFTGDLCQTR 81
EC + C H G C+ C C +G+ G+ CQ R
Sbjct: 3 EC--PLSHDGYCLHDGVCMYIEALDKYACNCVVGYIGERCQYR 43
Score = 24.5 bits (53), Expect = 6.7
Identities = 5/25 (20%), Positives = 7/25 (28%), Gaps = 1/25 (4%)
Query: 262 PCITQPCG-SGSCVPLYDGYKCVCT 285
C G C+ + K C
Sbjct: 6 LSHDGYCLHDGVCMYIEALDKYACN 30
>d3egfa_ g.3.11.1 (A:) Epidermal growth factor, EGF {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 53
Score = 47.2 bits (112), Expect = 5e-08
Identities = 14/44 (31%), Positives = 19/44 (43%), Gaps = 4/44 (9%)
Query: 40 KECLEDKCNKTPCEHGGKCITTPGSS--YCLCPLGFTGDLCQTR 81
C C +GG C+ C C +G++GD CQTR
Sbjct: 4 PGC--PSSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGDRCQTR 45
>d1g1sa2 g.3.11.1 (A:119-158) E-selectin, EGF-domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 40
Score = 46.7 bits (111), Expect = 6e-08
Identities = 13/39 (33%), Positives = 17/39 (43%)
Query: 45 DKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLD 83
C C G+C+ T G+ C C GF G C+ D
Sbjct: 2 ASCQDMSCSKQGECLETIGNYTCSCYPGFYGPECEYVRD 40
Score = 28.6 bits (64), Expect = 0.17
Identities = 7/24 (29%), Positives = 8/24 (33%), Gaps = 1/24 (4%)
Query: 262 PCITQPC-GSGSCVPLYDGYKCVC 284
C C G C+ Y C C
Sbjct: 3 SCQDMSCSKQGECLETIGNYTCSC 26
>d1g1ta2 g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 39
Score = 46.7 bits (111), Expect = 6e-08
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 45 DKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQT 80
C T C G+C+ T + C C GF+G C+
Sbjct: 2 AACTNTSCSGHGECVETINNYTCKCDPGFSGLKCEQ 37
Score = 29.0 bits (65), Expect = 0.12
Identities = 9/24 (37%), Positives = 10/24 (41%), Gaps = 1/24 (4%)
Query: 262 PCITQPC-GSGSCVPLYDGYKCVC 284
C C G G CV + Y C C
Sbjct: 3 ACTNTSCSGHGECVETINNYTCKC 26
>d1haea_ g.3.11.1 (A:) Heregulin-alpha, EGF-like domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 63
Score = 46.9 bits (111), Expect = 8e-08
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 5/50 (10%)
Query: 45 DKCNKTPCEHGGKC-----ITTPGSSYCLCPLGFTGDLCQTRLDLQVPQF 89
+ KT C +GG+C ++ P C C GFTG C + ++V
Sbjct: 7 AEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTENVPMKVQNQ 56
>d1cvua2 g.3.11.1 (A:33-73) Prostaglandin H2 synthase-1, EGF-like
module {Mouse (Mus musculus) [TaxId: 10090]}
Length = 41
Score = 45.9 bits (109), Expect = 1e-07
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Query: 45 DKCNKTPCEHGGKCITTPGSSY-CLCPL-GFTGDLCQT 80
+ C PC++ G+C++T Y C C GF G+ C T
Sbjct: 2 NPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCTT 39
Score = 28.6 bits (64), Expect = 0.14
Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 2/30 (6%)
Query: 260 AHPCITQPCGS-GSCVPL-YDGYKCVCTQS 287
A+PC + PC + G C+ +D YKC CT++
Sbjct: 1 ANPCCSNPCQNRGECMSTGFDQYKCDCTRT 30
>d1q4ga2 g.3.11.1 (A:32-73) Prostaglandin H2 synthase-1, EGF-like
module {Sheep (Ovis aries) [TaxId: 9940]}
Length = 42
Score = 45.2 bits (107), Expect = 2e-07
Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Query: 45 DKCNKTPCEHGGKCITTPGSSY-CLCPL-GFTGDLCQT 80
+ C PC+H G C+ Y C C G++G C
Sbjct: 3 NPCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPNCTI 40
Score = 28.3 bits (63), Expect = 0.23
Identities = 12/28 (42%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
Query: 262 PCITQPCG-SGSCVPL-YDGYKCVCTQS 287
PC PC G CV D Y+C CT++
Sbjct: 4 PCCYYPCQHQGICVRFGLDRYQCDCTRT 31
>d1autl1 g.3.11.1 (L:49-96) Activated protein c (autoprothrombin
IIa) {Human (Homo sapiens) [TaxId: 9606]}
Length = 48
Score = 44.8 bits (106), Expect = 4e-07
Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 43 LEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQTRLD 83
LE C C HG CI GS C C G+ G CQ +
Sbjct: 7 LEHPCASLCCGHGT-CIDGIGSFSCDCRSGWEGRFCQREVS 46
Score = 34.8 bits (80), Expect = 0.001
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 256 VVNCAHPCITQPCGSGSCVPLYDGYKCVCT 285
V+ HPC + CG G+C+ + C C
Sbjct: 4 VLPLEHPCASLCCGHGTCIDGIGSFSCDCR 33
>d1tpga1 g.3.11.1 (A:51-91) Plasminogen activator (tissue-type),
t-PA {Human (Homo sapiens) [TaxId: 9606]}
Length = 41
Score = 42.6 bits (100), Expect = 2e-06
Identities = 13/39 (33%), Positives = 17/39 (43%), Gaps = 2/39 (5%)
Query: 47 CNKTPCEHGGKCITTPGSS--YCLCPLGFTGDLCQTRLD 83
C++ C +GG C S C CP GF G C+
Sbjct: 1 CSEPRCFNGGTCQQALYFSDFVCQCPEGFAGKSCEIDTR 39
Score = 25.2 bits (55), Expect = 2.8
Identities = 6/24 (25%), Positives = 8/24 (33%), Gaps = 1/24 (4%)
Query: 263 CITQPCGS-GSCVPLYDGYKCVCT 285
C C + G+C VC
Sbjct: 1 CSEPRCFNGGTCQQALYFSDFVCQ 24
>d1szba2 g.3.11.1 (A:124-168) Mannose-binding protein associated
serine protease 2, MASP2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 45
Score = 38.7 bits (90), Expect = 4e-05
Identities = 10/34 (29%), Positives = 12/34 (35%), Gaps = 2/34 (5%)
Query: 41 ECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFT 74
EC C+H C G YC C G+
Sbjct: 3 ECQVAPGEAPTCDH--HCHNHLGGFYCSCRAGYV 34
>d1ioxa_ g.3.11.1 (A:) Betacellulin-2 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 50
Score = 38.7 bits (90), Expect = 5e-05
Identities = 11/45 (24%), Positives = 16/45 (35%), Gaps = 3/45 (6%)
Query: 36 KGRSKECLEDKCNKTPCEHGGKCITTPGSSY-CLCPLGFTGDLCQ 79
KG C + K C G + C+C G+ G C+
Sbjct: 2 KGHFSRCPK--QYKHYCIKGRCRFVVAEQTPSCVCDEGYIGARCE 44
>d1nt0a3 g.3.11.1 (A:120-164) Mannose-binding protein associated
serine protease 2, MASP2 {Rat (Rattus norvegicus)
[TaxId: 10116]}
Length = 45
Score = 38.0 bits (88), Expect = 9e-05
Identities = 11/34 (32%), Positives = 15/34 (44%), Gaps = 2/34 (5%)
Query: 41 ECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFT 74
EC + PC+H C G YC C +G+
Sbjct: 3 ECRTSLGDSVPCDH--YCHNYLGGYYCSCRVGYI 34
>d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 44
Score = 37.1 bits (86), Expect = 1e-04
Identities = 11/36 (30%), Positives = 15/36 (41%), Gaps = 4/36 (11%)
Query: 41 ECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGD 76
EC + C G +C+ TPG C C G+
Sbjct: 5 ECRI---SPDLCGRG-QCVNTPGDFECKCDEGYESG 36
Score = 26.3 bits (58), Expect = 1.1
Identities = 8/34 (23%), Positives = 13/34 (38%)
Query: 265 TQPCGSGSCVPLYDGYKCVCTQSCKESHLTEVMC 298
CG G CV ++C C + + + C
Sbjct: 10 PDLCGRGQCVNTPGDFECKCDEGYESGFMMMKNC 43
>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 43
Score = 36.7 bits (85), Expect = 2e-04
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 45 DKCNKTPCEHGGKCITTPGSSYCLCPLGFTGD 76
D+C + G+CI T GS C CP G+
Sbjct: 6 DECKEPDVCKHGQCINTDGSYRCECPFGYILA 37
Score = 24.3 bits (53), Expect = 5.1
Identities = 6/25 (24%), Positives = 8/25 (32%), Gaps = 1/25 (4%)
Query: 263 CITQPCG-SGSCVPLYDGYKCVCTQ 286
C G C+ Y+C C
Sbjct: 8 CKEPDVCKHGQCINTDGSYRCECPF 32
>d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 42
Score = 35.6 bits (82), Expect = 6e-04
Identities = 12/36 (33%), Positives = 13/36 (36%), Gaps = 4/36 (11%)
Query: 41 ECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGD 76
EC + C G C T GS C CP G
Sbjct: 4 ECQR---DPLLCRGG-VCHNTEGSYRCECPPGHQLS 35
Score = 23.6 bits (51), Expect = 8.9
Identities = 6/18 (33%), Positives = 7/18 (38%)
Query: 267 PCGSGSCVPLYDGYKCVC 284
C G C Y+C C
Sbjct: 11 LCRGGVCHNTEGSYRCEC 28
>d1k36a_ g.3.11.1 (A:) Epiregulin, EGF-domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 46
Score = 35.1 bits (81), Expect = 0.001
Identities = 11/40 (27%), Positives = 15/40 (37%), Gaps = 3/40 (7%)
Query: 41 ECLEDKCNKTPCEHGGKCITTPGSSY-CLCPLGFTGDLCQ 79
+C C HG S C C +G+TG C+
Sbjct: 5 KCSS--DMNGYCLHGQCIYLVDMSQNYCRCEVGYTGVRCE 42
>d1uzka2 g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 43
Score = 34.4 bits (79), Expect = 0.002
Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 4/36 (11%)
Query: 41 ECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGD 76
EC E C+ G KCI T GS C CP G+ +
Sbjct: 5 ECQE---LPGLCQGG-KCINTFGSFQCRCPTGYYLN 36
Score = 24.0 bits (52), Expect = 7.0
Identities = 7/24 (29%), Positives = 11/24 (45%), Gaps = 2/24 (8%)
Query: 263 CITQP--CGSGSCVPLYDGYKCVC 284
C P C G C+ + ++C C
Sbjct: 6 CQELPGLCQGGKCINTFGSFQCRC 29
>d1moxc_ g.3.11.1 (C:) Transforming growth factor alpha {Human
(Homo sapiens) [TaxId: 9606]}
Length = 49
Score = 34.4 bits (79), Expect = 0.002
Identities = 9/39 (23%), Positives = 14/39 (35%), Gaps = 4/39 (10%)
Query: 45 DKCN---KTPCEHGGKC-ITTPGSSYCLCPLGFTGDLCQ 79
+ C C HG + C+C G+ G C+
Sbjct: 5 NDCPDSHTQFCFHGTCRFLVQEDKPACVCHSGYVGARCE 43
>d1nzia2 g.3.11.1 (A:118-159) Complement C1S component {Human
(Homo sapiens) [TaxId: 9606]}
Length = 42
Score = 34.1 bits (78), Expect = 0.002
Identities = 10/34 (29%), Positives = 13/34 (38%), Gaps = 4/34 (11%)
Query: 41 ECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFT 74
EC + PC H C G +C CP +
Sbjct: 2 ECTD--FVDVPCSH--FCNNFIGGYFCSCPPEYF 31
>d1apqa_ g.3.11.1 (A:) Complement protease C1R {Human (Homo
sapiens) [TaxId: 9606]}
Length = 53
Score = 33.4 bits (76), Expect = 0.004
Identities = 7/37 (18%), Positives = 10/37 (27%), Gaps = 3/37 (8%)
Query: 41 ECLEDK---CNKTPCEHGGKCITTPGSSYCLCPLGFT 74
EC + C G +C C G+
Sbjct: 6 ECASRSKSGEEDPQPQCQHLCHNYVGGYFCSCRPGYE 42
>d1dx5i3 g.3.11.1 (I:423-462) Thrombomodulin, different EGF-like
domains {Human (Homo sapiens) [TaxId: 9606]}
Length = 40
Score = 32.8 bits (75), Expect = 0.005
Identities = 9/33 (27%), Positives = 12/33 (36%), Gaps = 3/33 (9%)
Query: 45 DKC-NKTPCEHGGKCITTPGSSYCLCPLGFTGD 76
D+C N C C PG+ C+C
Sbjct: 3 DECENGGFCSG--VCHNLPGTFECICGPDSALA 33
>d1gl4a2 g.3.11.5 (A:359-398) EGF-like domain of nidogen-1 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 40
Score = 32.5 bits (74), Expect = 0.007
Identities = 7/29 (24%), Positives = 11/29 (37%)
Query: 48 NKTPCEHGGKCITTPGSSYCLCPLGFTGD 76
N+ C +C C C +TG+
Sbjct: 5 NRHQCSVHAECRDYATGFCCRCVANYTGN 33
>d3bpse1 g.3.11.1 (E:293-332) Low density lipoprotein (LDL)
receptor, different EGF domains {Human (Homo sapiens)
[TaxId: 9606]}
Length = 40
Score = 32.0 bits (73), Expect = 0.009
Identities = 12/34 (35%), Positives = 14/34 (41%), Gaps = 5/34 (14%)
Query: 41 ECLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFT 74
ECL++ C H C CLCP GF
Sbjct: 4 ECLDNNG---GCSH--VCNDLKIGYECLCPDGFQ 32
>d1i0ua2 g.3.11.1 (A:42-82) Low density lipoprotein (LDL)
receptor, different EGF domains {Human (Homo sapiens)
[TaxId: 9606]}
Length = 41
Score = 31.6 bits (72), Expect = 0.012
Identities = 9/31 (29%), Positives = 12/31 (38%), Gaps = 3/31 (9%)
Query: 45 DKC-NKTPCEHGGKCITTPGSSYCLCPLGFT 74
D+C + C C+ G C C GF
Sbjct: 2 DECQDPDTCSQ--LCVNLEGGYKCQCEEGFQ 30
>d1uzka1 g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 43
Score = 31.0 bits (70), Expect = 0.021
Identities = 11/32 (34%), Positives = 15/32 (46%)
Query: 45 DKCNKTPCEHGGKCITTPGSSYCLCPLGFTGD 76
++C G C+ TPGS C CP F +
Sbjct: 4 NECLDPTTCISGNCVNTPGSYICDCPPDFELN 35
>d1autl2 g.3.11.1 (L:97-146) Activated protein c (autoprothrombin
IIa) {Human (Homo sapiens) [TaxId: 9606]}
Length = 50
Score = 30.1 bits (68), Expect = 0.062
Identities = 7/23 (30%), Positives = 9/23 (39%), Gaps = 2/23 (8%)
Query: 52 CEHGGKCITTPGSSYCLCPLGFT 74
C H C+ G C C G+
Sbjct: 9 CTH--YCLEEVGWRRCSCAPGYK 29
>d2p3ua1 g.3.11.1 (A:87-137) Factor X, N-terminal module {Human
(Homo sapiens) [TaxId: 9606]}
Length = 51
Score = 29.8 bits (67), Expect = 0.077
Identities = 7/23 (30%), Positives = 9/23 (39%), Gaps = 2/23 (8%)
Query: 52 CEHGGKCITTPGSSYCLCPLGFT 74
C+ C S C C G+T
Sbjct: 10 CDQ--FCHEEQNSVVCSCARGYT 30
>d2erfa1 b.29.1.4 (A:10-215) Thrombospondin 1 N-terminal domain
{Human (Homo sapiens) [TaxId: 9606]}
Length = 206
Score = 32.4 bits (73), Expect = 0.10
Identities = 18/133 (13%), Positives = 38/133 (28%), Gaps = 8/133 (6%)
Query: 110 LTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDR--YVDFTFDLGTGAATLRSSN-PIS 166
L + ++ L R D G ++ N + +D + + + ++
Sbjct: 63 LLASLRQMKKTRGTLLALERKDHSGQVFSVVSNGKAGTLDLSLTVQGKQHVVSVEEALLA 122
Query: 167 LGEWHKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQLSLSLSLYLGGVPDYNIVSPKVKI 226
G+W + L A L +D P + + +
Sbjct: 123 TGQWKSITLFVQEDRAQLYIDCEKMENAELDVPIQSVFTRDLASIARLRIAKGGV----- 177
Query: 227 KSSFIGCIQKVLI 239
+F G +Q V
Sbjct: 178 NDNFQGVLQNVRF 190
Score = 29.7 bits (66), Expect = 0.58
Identities = 8/82 (9%), Positives = 23/82 (28%), Gaps = 2/82 (2%)
Query: 335 TGYEFNIDMRIKTSSSSGLILWTGSSQSKDFLALGI--HNGYAHVMYNLGNGEVLLENNQ 392
G+ +R + L+ S ++ G + + + ++ +
Sbjct: 59 KGFLLLASLRQMKKTRGTLLALERKDHSGQVFSVVSNGKAGTLDLSLTVQGKQHVVSVEE 118
Query: 393 TKINNGVWHRLTVHRNFMVVMH 414
+ G W +T+
Sbjct: 119 ALLATGQWKSITLFVQEDRAQL 140
>d1kigl_ g.3.11.1 (L:) Factor X, N-terminal module {Cow (Bos
taurus) [TaxId: 9913]}
Length = 51
Score = 29.4 bits (66), Expect = 0.11
Identities = 5/23 (21%), Positives = 7/23 (30%), Gaps = 2/23 (8%)
Query: 52 CEHGGKCITTPGSSYCLCPLGFT 74
C+ C C C G+
Sbjct: 8 CDQ--FCREERSEVRCSCAHGYV 28
>d1xdtr_ g.3.11.1 (R:) Heparin-binding epidermal growth factor,
HBEGF {Human (Homo sapiens) [TaxId: 9606]}
Length = 41
Score = 27.8 bits (62), Expect = 0.27
Identities = 9/30 (30%), Positives = 13/30 (43%), Gaps = 3/30 (10%)
Query: 52 CEHGGKCITTPGSS--YCLCPLGFTGDLCQ 79
C HG +C C+C G+ G+ C
Sbjct: 10 CIHG-ECKYVKELRAPSCICHPGYHGERCH 38
>d2i9aa1 g.3.11.1 (A:10-49) Plasminogen activator (urokinase-type)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 40
Score = 28.0 bits (62), Expect = 0.29
Identities = 10/31 (32%), Positives = 15/31 (48%), Gaps = 3/31 (9%)
Query: 52 CEHGGKCITT---PGSSYCLCPLGFTGDLCQ 79
C +GG C++ +C CP F G C+
Sbjct: 4 CLNGGTCVSNKYFSNIHWCNCPKKFGGQHCE 34
>d1emoa2 g.3.11.1 (A:2167-2205) Fibrillin-1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 39
Score = 27.6 bits (61), Expect = 0.42
Identities = 8/21 (38%), Positives = 14/21 (66%)
Query: 264 ITQPCGSGSCVPLYDGYKCVC 284
+ PCG+G+C + G++C C
Sbjct: 6 VGNPCGNGTCKNVIGGFECTC 26
>d1gpsa_ g.3.7.5 (A:) gamma-Thionin {English wheat (Triticum
turgidum) [TaxId: 4571]}
Length = 47
Score = 26.6 bits (59), Expect = 1.1
Identities = 10/31 (32%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
Query: 258 NCAHPCITQPCGSGSCVPLYDGYKCVCTQSC 288
NCA C + G G+C + +C C + C
Sbjct: 19 NCAQVCQQEGWGGGNCDGPF--RRCKCIRQC 47
>d1fyhb2 b.1.2.1 (B:110-223) Interferon-gamma receptor alpha chain
{Human (Homo sapiens) [TaxId: 9606]}
Length = 114
Score = 27.9 bits (62), Expect = 1.1
Identities = 14/74 (18%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Query: 4 SDNQVILDDWNTVRVFRHRWDAWIQLNDGNKIKGRSKECLEDKCNKTPCEHGGKCITTPG 63
+ +V D T + + ++++N G++I+ + ED C++ C+ +++
Sbjct: 29 DEQEVDYDPETTCYIRVYN--VYVRMN-GSEIQYKILTQKEDDCDEIQCQLAIP-VSSLN 84
Query: 64 SSYCLCPLGFTGDL 77
S YC+ G
Sbjct: 85 SQYCVSAEGVLHVW 98
>d1dt9a2 d.79.3.2 (A:277-422) C-terminal domain of eukaryotic
peptide chain release factor subunit 1, ERF1 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 146
Score = 28.3 bits (63), Expect = 1.2
Identities = 11/44 (25%), Positives = 20/44 (45%), Gaps = 7/44 (15%)
Query: 462 FEQLNTDSGLYVGGVEDIEELTRSKYHHSFKGWISNLILSNDYQ 505
F++++ D+G Y GVED + G + LI+ +
Sbjct: 15 FDEISQDTGKYCFGVEDTLKALEM-------GAVEILIVYENLD 51
>d2bz6l1 g.3.11.1 (L:90-142) Coagulation factor VIIa {Human (Homo
sapiens) [TaxId: 9606]}
Length = 53
Score = 26.3 bits (58), Expect = 1.5
Identities = 7/24 (29%), Positives = 10/24 (41%), Gaps = 3/24 (12%)
Query: 52 CEHGGKCITTPGSSY-CLCPLGFT 74
CE C G+ C C G++
Sbjct: 9 CEQ--YCSDHTGTKRSCRCHEGYS 30
>d1n4na_ g.3.7.5 (A:) Floral defensin 1 {Garden petunia (Petunia x
hybrida), PHD1 [TaxId: 4102]}
Length = 47
Score = 25.9 bits (57), Expect = 1.7
Identities = 8/31 (25%), Positives = 12/31 (38%), Gaps = 2/31 (6%)
Query: 258 NCAHPCITQPCGSGSCVPLYDGYKCVCTQSC 288
C C G C + +C+CT+ C
Sbjct: 19 PCVACCKKAKFSDGHCSKIL--RRCLCTKEC 47
>d1mr4a_ g.3.7.5 (A:) Floral defensin 1 {Common tobacco (Nicotiana
tabacum), NAD1 [TaxId: 4097]}
Length = 47
Score = 25.8 bits (57), Expect = 1.7
Identities = 9/31 (29%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
Query: 258 NCAHPCITQPCGSGSCVPLYDGYKCVCTQSC 288
C CI++ G C + +C+CT+ C
Sbjct: 19 PCRKACISEKFTDGHCSKIL--RRCLCTKPC 47
>d1rfnb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 57
Score = 25.9 bits (57), Expect = 2.0
Identities = 6/24 (25%), Positives = 9/24 (37%), Gaps = 3/24 (12%)
Query: 52 CEHGGKCITTPGSSY-CLCPLGFT 74
CE C + + C C G+
Sbjct: 10 CEQ--FCKNSADNKVVCSCTEGYR 31
>d1h2ca_ b.31.1.1 (A:) EV matrix protein {Ebola virus [TaxId:
205488]}
Length = 125
Score = 27.3 bits (60), Expect = 2.2
Identities = 17/46 (36%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Query: 171 HKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQLSLSLSLYLGGVPD 216
H LRL R G A+LQ P Q P FT +L L +P
Sbjct: 77 HPLRLLRIGNQAFLQEFVLPPVQ--LPQYFTFDLTALKLITQPLPA 120
>d1kloa1 g.3.11.2 (A:11-65) Laminin gamma1 chain {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 55
Score = 25.6 bits (56), Expect = 2.6
Identities = 11/32 (34%), Positives = 12/32 (37%), Gaps = 3/32 (9%)
Query: 51 PCEHGGKCITTP--GSSYCL-CPLGFTGDLCQ 79
PC G C P C CP G G C+
Sbjct: 2 PCPGGSSCAIVPKTKEVVCTHCPTGTAGKRCE 33
>d1x52a1 d.79.3.2 (A:8-118) Cell division protein pelota {Human
(Homo sapiens) [TaxId: 9606]}
Length = 111
Score = 26.6 bits (59), Expect = 3.0
Identities = 6/44 (13%), Positives = 18/44 (40%), Gaps = 7/44 (15%)
Query: 462 FEQLNTDSGLYVGGVEDIEELTRSKYHHSFKGWISNLILSNDYQ 505
++ L + G++ +E+ + I L++S++
Sbjct: 22 YKMLQHEPDRAFYGLKQVEKANEA-------MAIDTLLISDELF 58
>d1l3ya_ g.3.11.6 (A:) Integrin beta EGF-like domains {Human (Homo
sapiens) [TaxId: 9606]}
Length = 41
Score = 24.4 bits (53), Expect = 4.9
Identities = 10/38 (26%), Positives = 10/38 (26%), Gaps = 4/38 (10%)
Query: 42 CLEDKCNKTPCEHGGKCITTPGSSYCLCPLGFTGDLCQ 79
C G C C C GF G CQ
Sbjct: 7 CERYNGQVCGGPGRGLCF----CGKCRCHPGFEGSACQ 40
>d1x99a_ b.97.1.2 (A:) Lectin xcl {Xerocomus chrysenteron [TaxId:
5386]}
Length = 145
Score = 26.4 bits (58), Expect = 6.0
Identities = 15/63 (23%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Query: 343 MRIKTSSSSGLILWTGSSQSKDFLALGIHNG--YAHVMYNLGNGEVLLENNQTKINNGVW 400
+ + S +SG++ + + + +A+G+HN + V+ L E L N NNG
Sbjct: 46 LTMGGSGTSGMLRFMSTKGERITVAVGVHNYKRWCDVVTGLKPDETALVINPQYYNNGGR 105
Query: 401 HRL 403
+
Sbjct: 106 DYV 108
>d2vgna3 d.79.3.2 (A:278-381) Dom34 {Saccharomyces cerevisiae
[TaxId: 4932]}
Length = 104
Score = 25.8 bits (57), Expect = 6.0
Identities = 4/20 (20%), Positives = 8/20 (40%)
Query: 462 FEQLNTDSGLYVGGVEDIEE 481
LN D G +++ +
Sbjct: 11 LLHLNKDDDKAWYGEKEVVK 30
>d1ijqa2 g.3.11.1 (A:643-692) Low density lipoprotein (LDL)
receptor, different EGF domains {Human (Homo sapiens)
[TaxId: 9606]}
Length = 50
Score = 24.5 bits (53), Expect = 6.7
Identities = 6/38 (15%), Positives = 10/38 (26%), Gaps = 4/38 (10%)
Query: 41 ECLEDKCNKTPCEH----GGKCITTPGSSYCLCPLGFT 74
C + C++ + C CP G
Sbjct: 3 WCERTTLSNGGCQYLCLPAPQINPHSPKFTCACPDGML 40
>d1tv5a1 c.1.4.1 (A:158-566) Dihydroorotate dehydrogenase
{Plasmodium falciparum [TaxId: 5833]}
Length = 409
Score = 26.8 bits (58), Expect = 7.5
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 307 FLHYLDPEIIHSSGLLHYKFQLH 329
L Y+D EI H LL K+ +
Sbjct: 18 CLKYIDGEICHDLFLLLGKYNIL 40
>d2vzsa3 b.1.4.1 (A:675-777) Exochitosanase CsxA, domains 2, 4 and 5
{Amycolatopsis orientalis [TaxId: 31958]}
Length = 103
Score = 25.2 bits (55), Expect = 8.8
Identities = 6/31 (19%), Positives = 15/31 (48%)
Query: 376 HVMYNLGNGEVLLENNQTKINNGVWHRLTVH 406
H+ Y+ N V++ N + +G+ ++
Sbjct: 3 HIQYSHDNRSVVVINQTSNAVSGLTATTKLY 33
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.321 0.138 0.430
Gapped
Lambda K H
0.267 0.0607 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 2,049,602
Number of extensions: 99165
Number of successful extensions: 389
Number of sequences better than 10.0: 1
Number of HSP's gapped: 350
Number of HSP's successfully gapped: 96
Length of query: 533
Length of database: 2,407,596
Length adjustment: 90
Effective length of query: 443
Effective length of database: 1,171,896
Effective search space: 519149928
Effective search space used: 519149928
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.2 bits)