Query psy5026
Match_columns 293
No_of_seqs 133 out of 1433
Neff 9.5
Searched_HMMs 29240
Date Fri Aug 16 23:56:15 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5026.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/5026hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2jd4_A Laminin subunit alpha-1 100.0 5.2E-42 1.8E-46 309.6 32.8 277 4-292 41-346 (383)
2 1dyk_A Laminin alpha 2 chain; 100.0 3.8E-41 1.3E-45 304.9 34.4 275 5-292 56-358 (394)
3 2wjs_A Laminin subunit alpha-2 100.0 9.5E-39 3.3E-43 304.2 32.0 276 4-292 29-355 (608)
4 3asi_A Neurexin-1-alpha; beta- 100.0 3.7E-38 1.3E-42 286.6 30.9 269 4-277 24-361 (410)
5 1h30_A GAS6, growth-arrest-spe 100.0 8.7E-37 3E-41 278.5 23.5 271 5-292 60-386 (422)
6 2wjs_A Laminin subunit alpha-2 100.0 1.8E-35 6.3E-40 281.5 33.2 269 5-292 224-531 (608)
7 3qcw_A Neurexin-1-alpha; synap 100.0 1.7E-35 5.9E-40 300.9 32.2 275 7-292 255-584 (1245)
8 3qcw_A Neurexin-1-alpha; synap 100.0 6.3E-32 2.1E-36 274.8 34.6 283 4-292 440-800 (1245)
9 3pve_A Agrin, AGRN protein; mR 99.9 6.8E-24 2.3E-28 172.5 18.2 140 153-292 18-160 (189)
10 2r16_A Neurexin-1-alpha; beta- 99.9 2.5E-22 8.7E-27 162.2 18.1 134 153-292 14-147 (182)
11 1pz7_A Agrin; structural prote 99.9 3.4E-22 1.2E-26 164.5 19.1 138 153-292 21-174 (204)
12 3sh4_A LG3 peptide; actin disa 99.9 1.7E-22 5.9E-27 165.0 17.0 139 153-292 14-158 (195)
13 3v64_A Low-density lipoprotein 99.9 3.3E-22 1.1E-26 162.8 18.0 139 153-292 11-161 (191)
14 1d2s_A SHBG, sex hormone-bindi 99.9 4.3E-22 1.5E-26 159.0 15.8 130 153-292 16-145 (170)
15 2h0b_A Neurexin-1-alpha; B-san 99.9 2.9E-21 1E-25 156.3 17.2 135 153-292 14-152 (184)
16 2jd4_A Laminin subunit alpha-1 99.9 6E-21 2E-25 171.8 20.1 138 153-292 30-167 (383)
17 1f5f_A SHBG, sex hormone-bindi 99.9 3.3E-21 1.1E-25 158.6 16.2 133 153-292 28-163 (205)
18 3bod_A Neurexin-1-alpha; neure 99.9 8E-21 2.8E-25 152.8 17.3 123 153-276 14-140 (178)
19 1dyk_A Laminin alpha 2 chain; 99.9 1.8E-20 6E-25 169.3 20.1 137 153-292 44-180 (394)
20 2r1b_A Neurexin-1-beta, neurex 99.9 2.3E-20 7.7E-25 155.0 16.7 100 153-253 20-122 (220)
21 3v64_A Low-density lipoprotein 99.8 2.5E-20 8.5E-25 151.6 16.1 122 5-127 34-178 (191)
22 1pz7_A Agrin; structural prote 99.8 4.9E-20 1.7E-24 151.5 16.5 120 5-126 47-190 (204)
23 3pve_A Agrin, AGRN protein; mR 99.8 2.9E-20 9.8E-25 151.0 14.7 121 5-125 33-175 (189)
24 2r1d_A Neurexin-1-beta, neurex 99.8 8E-20 2.7E-24 152.1 17.5 123 153-276 48-174 (226)
25 3sh4_A LG3 peptide; actin disa 99.8 3.9E-20 1.3E-24 151.0 14.1 132 6-142 30-194 (195)
26 1h30_A GAS6, growth-arrest-spe 99.8 1E-19 3.5E-24 165.7 15.7 136 153-292 49-187 (422)
27 1d2s_A SHBG, sex hormone-bindi 99.8 8.9E-20 3.1E-24 145.5 12.5 118 6-127 26-162 (170)
28 3asi_A Neurexin-1-alpha; beta- 99.8 4.5E-19 1.5E-23 160.9 17.4 133 153-292 15-152 (410)
29 2h0b_A Neurexin-1-alpha; B-san 99.8 2.6E-19 8.9E-24 144.8 13.8 114 6-124 28-166 (184)
30 2r16_A Neurexin-1-alpha; beta- 99.8 1.5E-18 5.2E-23 139.9 15.4 115 6-126 27-164 (182)
31 1f5f_A SHBG, sex hormone-bindi 99.8 5E-19 1.7E-23 145.6 12.7 118 6-126 38-179 (205)
32 3bod_A Neurexin-1-alpha; neure 99.8 1.2E-18 4.2E-23 140.0 13.2 110 6-126 29-163 (178)
33 2r1d_A Neurexin-1-beta, neurex 99.8 4.5E-18 1.5E-22 141.5 13.9 110 6-126 63-197 (226)
34 2r1b_A Neurexin-1-beta, neurex 99.8 8.3E-18 2.8E-22 139.5 13.7 110 6-126 35-199 (220)
35 3flp_A SAP-like pentraxin; phy 98.2 4.9E-05 1.7E-09 62.3 14.1 136 153-292 18-161 (217)
36 1za4_A Thrombospondin 1; TSP-1 98.2 5.8E-05 2E-09 63.2 14.6 107 166-273 72-187 (251)
37 2v73_A CBM40, putative EXO-alp 98.2 0.00022 7.7E-09 56.3 16.8 119 166-292 40-166 (191)
38 2erf_A Thrombospondin-1; TSP-1 98.1 0.00013 4.5E-09 59.3 14.4 108 166-274 62-178 (209)
39 3kqr_A Serum amyloid P-compone 98.0 0.00036 1.2E-08 56.5 16.1 131 153-292 18-152 (204)
40 3pvn_A C-reactive protein; pen 98.0 0.00035 1.2E-08 56.6 15.4 131 153-292 18-154 (206)
41 2uur_A Collagen alpha-1(IX) ch 97.9 0.00022 7.6E-09 59.4 13.2 106 166-274 86-200 (245)
42 4b1m_A Levanase; hydrolase, CB 96.7 0.03 1E-06 44.3 12.4 85 166-253 64-156 (185)
43 4dqa_A Uncharacterized protein 96.7 0.021 7.2E-07 50.1 12.6 112 153-276 148-271 (355)
44 2v73_A CBM40, putative EXO-alp 96.4 0.11 3.8E-06 40.9 13.4 110 6-122 40-178 (191)
45 2sli_A Intramolecular trans-si 95.5 0.41 1.4E-05 45.6 15.4 109 166-274 35-158 (679)
46 2jkb_A Sialidase B; intramolec 95.4 0.5 1.7E-05 45.1 15.6 110 166-275 57-181 (686)
47 3zr5_A Galactocerebrosidase; h 91.5 4.9 0.00017 38.0 14.5 86 167-252 530-622 (656)
48 1za4_A Thrombospondin 1; TSP-1 91.1 3.6 0.00012 33.9 11.9 102 6-118 72-204 (251)
49 3pvn_A C-reactive protein; pen 90.4 5.3 0.00018 31.7 12.1 114 5-122 30-166 (206)
50 1a8d_A Tetanus neurotoxin; clo 89.1 12 0.0004 33.3 15.6 110 166-276 85-216 (452)
51 4azz_A Levanase; hydrolase; 1. 88.5 0.079 2.7E-06 41.1 0.0 82 167-251 44-133 (172)
52 2erf_A Thrombospondin-1; TSP-1 88.0 5.9 0.0002 31.5 10.7 101 6-117 62-193 (209)
53 2gy5_A Angiopoietin-1 receptor 85.6 0.1 3.6E-06 46.8 -1.1 44 177-222 364-407 (423)
54 2uur_A Collagen alpha-1(IX) ch 84.9 9.9 0.00034 31.1 10.6 108 3-120 83-220 (245)
55 3kqr_A Serum amyloid P-compone 83.8 14 0.00049 29.1 12.4 114 5-122 30-164 (204)
56 3flp_A SAP-like pentraxin; phy 83.2 8.6 0.0003 30.7 9.5 115 6-122 32-173 (217)
57 2gy5_A Angiopoietin-1 receptor 79.9 0.16 5.6E-06 45.5 -2.2 37 17-55 364-400 (423)
58 3v0a_B NTNH; botulinum neuroto 78.1 53 0.0018 32.0 14.4 85 166-255 902-992 (1196)
59 4dqa_A Uncharacterized protein 76.1 26 0.0009 30.2 10.8 105 5-122 160-293 (355)
60 1dhk_B Bean lectin-like inhibi 67.2 23 0.0008 28.4 7.8 70 178-248 78-152 (223)
61 4b1m_A Levanase; hydrolase, CB 65.2 19 0.00064 27.8 6.8 42 4-48 62-110 (185)
62 3u1x_A Putative glycosyl hydro 60.8 17 0.00057 29.5 5.9 89 166-255 79-187 (236)
63 2sli_A Intramolecular trans-si 58.7 60 0.0021 30.7 10.1 112 5-122 34-182 (679)
64 3imm_A Putative secreted glyco 57.0 25 0.00085 27.7 6.2 87 166-253 47-145 (201)
65 1ioa_A Arcelin-5A, ARC5A; lect 54.6 84 0.0029 25.4 10.5 81 167-247 66-174 (240)
66 2jkb_A Sialidase B; intramolec 51.1 1.1E+02 0.0039 28.9 10.7 111 6-122 57-204 (686)
67 2nyy_A Botulinum neurotoxin ty 50.6 2.1E+02 0.0072 28.8 12.8 102 166-272 938-1055(1295)
68 1avb_A Arcelin-1; lectin-like 42.5 1.3E+02 0.0044 24.0 10.4 53 195-247 116-172 (226)
69 1epw_A Bontoxilysin B, botulin 38.8 3.2E+02 0.011 27.5 14.6 86 166-255 923-1026(1290)
70 3vuo_A NTNHA; protection of bo 31.9 4.1E+02 0.014 26.7 14.4 85 166-254 899-988 (1196)
71 2zzj_A Glucuronan lyase A; bet 31.1 2.1E+02 0.0071 23.1 8.0 60 196-255 109-181 (238)
72 3zyp_A CIP1; metal binding pro 29.4 1.7E+02 0.0057 22.9 7.1 84 167-251 66-160 (218)
73 3h3l_A Putative sugar hydrolas 28.1 79 0.0027 25.6 4.8 87 166-255 77-180 (241)
74 3s5q_A Putative glycosylhydrol 27.9 77 0.0026 25.1 4.7 87 166-253 60-158 (214)
75 2jtd_A Myomesin-1, skelemin; i 27.9 96 0.0033 22.4 4.6 56 194-249 42-103 (142)
76 1ms9_A Trans-sialidase; trans- 27.4 79 0.0027 29.8 5.3 52 224-276 552-605 (648)
77 1ajo_A CPA16M-127, circularly 27.2 1.4E+02 0.0047 23.5 6.1 25 228-252 16-40 (214)
78 3i4i_A 1,3-1,4-beta-glucanase; 26.6 1E+02 0.0035 24.7 5.3 26 227-252 161-186 (234)
79 1w0p_A Sialidase; hydrolase, n 24.7 1.6E+02 0.0056 28.3 7.1 80 167-251 93-177 (781)
80 3osd_A Putative glycosyl hydro 24.2 1E+02 0.0034 25.4 4.8 31 225-255 176-206 (265)
81 3gne_A Val-1; alginate lyase, 24.0 71 0.0024 26.1 3.7 28 224-251 159-197 (252)
82 3o5s_A Beta-glucanase; glycosy 23.8 69 0.0024 25.8 3.8 27 227-253 165-191 (238)
83 2ayh_A 1,3-1,4-beta-D-glucan 4 23.7 94 0.0032 24.3 4.5 26 227-252 141-166 (214)
84 1cpn_A Circularly permuted; hy 21.9 1.1E+02 0.0038 23.9 4.5 27 227-253 83-109 (208)
85 3hbk_A Putative glycosyl hydro 21.2 1.2E+02 0.0039 24.6 4.6 31 225-255 160-191 (245)
86 1oq1_A Protein YESU; structura 20.3 1.2E+02 0.0041 24.2 4.3 27 225-251 155-181 (223)
87 2uwa_A Cellulase; glycoside hy 20.1 2.5E+02 0.0087 22.9 6.6 28 227-254 141-168 (274)
No 1
>2jd4_A Laminin subunit alpha-1; basement membrane protein, metal binding protein; 1.9A {Mus musculus}
Probab=100.00 E-value=5.2e-42 Score=309.56 Aligned_cols=277 Identities=17% Similarity=0.235 Sum_probs=205.9
Q ss_pred CCceeEEEEEEEeCCCCeEEEEeccCCCCCCCeEEEEEECCEEEEEEeCC---------------CCCCeEEEEeccEEE
Q psy5026 4 SPQAWRFPIQFKPESWDGILFLTGERDDLNGDFMTLLIFEGYVEFSTPYR---------------PYADITVHRTVRTLI 68 (293)
Q Consensus 4 ~~~~~~i~~~FrT~~~~GlL~~~~~~~~~~~~~~~l~l~~G~l~~~~~~g---------------~w~~~~~~~~~~~v~ 68 (293)
.+..++|+|+|||.+++|+|||.++.. ..||++|+|.+|+|++.+++| +||.+.+.+..+.+.
T Consensus 41 ~~~~~~is~~frT~~~~GlLly~~~~~--~~d~~~l~L~~G~l~~~~~~g~~~~~~~~~~~~~Dg~WH~V~v~r~~~~~~ 118 (383)
T 2jd4_A 41 VRKRLQVQLSIRTFASSGLIYYVAHQN--QMDYATLQLQEGRLHFMFDLGKGRTKVSHPALLSDGKWHTVKTEYIKRKAF 118 (383)
T ss_dssp CSSEEEEEEEEEECCSCEEEEEEECTT--SSSEEEEEEETTEEEEEEECSSCEEEEECCCCCTTSSCEEEEEEEETTEEE
T ss_pred cccceEEEEEEEcCCCCeEEEEeCCCC--CCcEEEEEEECCEEEEEEECCCCeEEEeCcceecCCCcEEEEEEEeCCEEE
Confidence 456789999999999999999998642 469999999999999988655 799999999888877
Q ss_pred ecccCC-------CCceeeeecCCceEEcCCCCCCCCCCCCCcccCceeeEEEEEEcCeeeeeccCCCCCcccccccccc
Q psy5026 69 LPYTVP-------SGLFSRITFREPVFVGGRGNTSGLSDKLPTEKGFKGCIRHLDINDHLYNFNVSPGGDSLKGIDVALL 141 (293)
Q Consensus 69 l~~~g~-------~~~~~~l~~~~~l~iGG~p~~~~~~~~~~~~~~F~GCi~~~~~n~~~~~~~~~~~~~~~~~~~~~~C 141 (293)
|..++. ++....++....+||||+|.............+|+|||+++.+|++.+++... ....++..|
T Consensus 119 L~VD~~~~~~~~~~g~~~~l~~~~~l~vGG~p~~~~~~~~~~~~~~F~GCi~~l~in~~~l~l~~~-----~~~~~~~~C 193 (383)
T 2jd4_A 119 MTVDGQESPSVTVVGKATTLDVERKLYLGGLPSHYRARNIGTITHSIPACIGEIMVNGQQLDKDRP-----LSASAVDRC 193 (383)
T ss_dssp EEETTEECCCEECCSSCCCCCCCSEEEESSCCTTCCCCSSCSCCSBCCEEEEEEEETTEECCTTSC-----SEEESCBCC
T ss_pred EEEcCccccceecCCCcceecCCCCeEEeccCcccccccccccCCCceEEeEEEEECCEEeccCCc-----cccCccccc
Confidence 755442 24455678888999999997543221223457899999999999998876542 122344455
Q ss_pred cccCCCCcCCc---ceeEecCCccceeeEEEEEEEEEeCCCCeEEEEeccCCCCCCCeEEEEEeCCEEEEEEECCCceEE
Q psy5026 142 RPATHYQVSSI---PDQVYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAAT 218 (293)
Q Consensus 142 ~pC~~~~~~~f---s~~~~~~~~~~~~~~~~i~~~frt~~~~GlLl~~~~~~~~~~~~l~l~l~~g~v~~~~~~g~~~~~ 218 (293)
.+....+ ..| +|+.|..........+.|+|+|||++++|+|||..... .+|++|+|.+|++.++++.|.+...
T Consensus 194 ~~~~~~g-~~F~g~sy~~~~~~~~~~~~~~~isl~frT~~~~GlLl~~~~~~---~d~l~l~L~~G~l~~~~~~g~g~~~ 269 (383)
T 2jd4_A 194 YVVAQEG-TFFEGSGYAALVKEGYKVRLDLQITLEFRTTSKNGVLLGISSAK---VDAIGLEIVDGKVLFHVNNGAGRIT 269 (383)
T ss_dssp BSSEESS-EEEEEEEEEEEEEEEECCBSCEEEEEEEEESCSCEEEEEEECSS---SCEEEEEEETTEEEEEEESSSCEEE
T ss_pred cCcCccC-ceECCCeEEEEecCccccCCceEEEEEEEeCCCCEEEEEecCCC---CcEEEEEEECCEEEEEEECCCCcEE
Confidence 4322111 135 79988422223334679999999999999999987643 7899999999999999999987655
Q ss_pred EEe----cCCCCCCCeEEEEEEEeCCEEEEEECCccceeEecCCCcccccCCCCeEEeccCCCCccCCCCCcCCCcee
Q psy5026 219 LRS----SNPISLGEWRKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQLSLSLSLYLGGVPDYNIVSPKVKIKSSFIG 292 (293)
Q Consensus 219 ~~~----~~~~~dg~wh~V~i~r~~~~~~l~VD~~~~~~~~~~~~~~~l~~~~~lyvGG~p~~~~~~~~~~~~~~F~G 292 (293)
+.. ...+|||+||+|.+.|.++.+.|.||+........+.....++....+||||+|+.... .......+|+|
T Consensus 270 ~~~~~~~~~~l~DG~WH~V~l~~~~~~~~L~VD~~~~~~~~~~~~~~~l~~~~~lylGG~p~~~~~-~~~~~~~~F~G 346 (383)
T 2jd4_A 270 ATYQPRAARALCDGKWHTLQAHKSKHRIVLTVDGNSVRAESPHTHSTSADTNDPIYVGGYPAHIKQ-NSLSSRASFRG 346 (383)
T ss_dssp EEECCSSTTGGGSSSCEEEEEEEETTEEEEEETTEEEEEC----CCCCBCCCEEEEESCCCTTSCC-TTCSCCCBCEE
T ss_pred EEEecCCCccccCCCcEEEEEEEcCCEEEEEECCeecccccCCCCcccccCCCCEEEecccccccc-CCccccCCCce
Confidence 442 45699999999999999999999999985433222223345677778999999986432 23455688987
No 2
>1dyk_A Laminin alpha 2 chain; metal binding protein; 2.0A {Mus musculus} SCOP: b.29.1.4 b.29.1.4 PDB: 1okq_A 1qu0_A
Probab=100.00 E-value=3.8e-41 Score=304.86 Aligned_cols=275 Identities=18% Similarity=0.232 Sum_probs=206.1
Q ss_pred CceeEEEEEEEeCCCCeEEEEeccCCCCCCCeEEEEEECCEEEEEEeCC---------------CCCCeEEEEeccEEEe
Q psy5026 5 PQAWRFPIQFKPESWDGILFLTGERDDLNGDFMTLLIFEGYVEFSTPYR---------------PYADITVHRTVRTLIL 69 (293)
Q Consensus 5 ~~~~~i~~~FrT~~~~GlL~~~~~~~~~~~~~~~l~l~~G~l~~~~~~g---------------~w~~~~~~~~~~~v~l 69 (293)
+..++|+|+|||.+++|+|||.++.. ..||++|+|.+|+|++.+++| +||.+.+.+..+.+.|
T Consensus 56 ~~~~~is~~frT~~~~GlLly~~~~~--~~dfi~l~L~~G~l~~~~~~g~g~~~~~~~~~~~Dg~WH~V~v~r~~~~~~L 133 (394)
T 1dyk_A 56 KNRLTIELEVRTEAESGLLFYMARIN--HADFATVQLRNGFPYFSYDLGSGDTSTMIPTKINDGQWHKIKIVRVKQEGIL 133 (394)
T ss_dssp SSEEEEEEEEEECCSCEEEEEEECTT--SSSEEEEEEETTEEEEEEESSSCEEEEECCSCCCSSSCEEEEEEEETTEEEE
T ss_pred ccceEEEEEEEeCCCCeEEEEcCCCC--CCceEEEEEECCEEEEEEECCCCceEEEcccccCCCCEEEEEEEEeCCEEEE
Confidence 46789999999999999999998642 369999999999999988765 7999999998887776
Q ss_pred cccCC------CCceeeeecCCceEEcCCCCCCCCCCCCCcccCceeeEEEEEEcCeeeeeccCCCCCcccccccccccc
Q psy5026 70 PYTVP------SGLFSRITFREPVFVGGRGNTSGLSDKLPTEKGFKGCIRHLDINDHLYNFNVSPGGDSLKGIDVALLRP 143 (293)
Q Consensus 70 ~~~g~------~~~~~~l~~~~~l~iGG~p~~~~~~~~~~~~~~F~GCi~~~~~n~~~~~~~~~~~~~~~~~~~~~~C~p 143 (293)
..++. ++....+++...+||||+|.........+...+|+|||+++.+|++.+++... ....++..|..
T Consensus 134 ~VD~~~~~~~~~g~~~~l~~~~~l~vGG~p~~~~~~~~~~~~~~F~GCi~~l~in~~~~~l~~~-----~~~~~~~~C~~ 208 (394)
T 1dyk_A 134 YVDDASSQTISPKKADILDVVGILYVGGLPINYTTRRIGPVTYSLDGCVRNLHMEQAPVDLDQP-----TSSFHVGTCFA 208 (394)
T ss_dssp EETTEEEEEECSTTCCCCCCCSEEEESSCCTTCCCCSSCSCCSBCSEEEEEEEESSSCCCTTSC-----SEEESCBCCBS
T ss_pred EEcCcccceecCCCCceecCCCCEEEcccCCcccccccccCCCCccEeeeEEEECCEEecCCCc-----cccCcCCCCCC
Confidence 54432 34455678888999999997543321223457899999999999998877542 12234455652
Q ss_pred cCCCCcCCc---ceeEecCCccceeeEEEEEEEEEeCCCCeEEEEeccCCCCCCCeEEEEEeCCEEEEEEECCCceEEEE
Q psy5026 144 ATHYQVSSI---PDQVYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLR 220 (293)
Q Consensus 144 C~~~~~~~f---s~~~~~~~~~~~~~~~~i~~~frt~~~~GlLl~~~~~~~~~~~~l~l~l~~g~v~~~~~~g~~~~~~~ 220 (293)
+...+ ..| +|+.+.. .......+.|+|.|||++++|+|||..... .+|++|+|.+|++.++++.|.+...+.
T Consensus 209 ~~~~g-~~F~g~gy~~~~~-~~~~~~~~~is~~frT~~~~GlLl~~~~~~---~~~l~l~L~~G~l~~~~~~g~~~~~~~ 283 (394)
T 1dyk_A 209 NAESG-TYFDGTGFAKAVG-GFKVGLDLLVEFEFRTTRPTGVLLGVSSQK---MDGMGIEMIDEKLMFHVDNGAGRFTAI 283 (394)
T ss_dssp SEEES-EEEEEEEEEECCS-SBCCBSEEEEEEEEEESCSCEEEEEEECSS---SCEEEEEEETTEEEEEEESSSCCEEEE
T ss_pred CCccC-ceeCCCceeEEcC-CcccCCceEEEEEEEeCCCCEEEEEecCCC---CCEEEEEEECCEEEEEEECCCCcEEEE
Confidence 21111 134 7887642 233345789999999999999999986432 789999999999999999987654443
Q ss_pred e----cCCCCCCCeEEEEEEEeCCEEEEEECCccceeEecCCCcccccCCCCeEEeccCCCCccCCCCCcCCCcee
Q psy5026 221 S----SNPISLGEWRKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQLSLSLSLYLGGVPDYNIVSPKVKIKSSFIG 292 (293)
Q Consensus 221 ~----~~~~~dg~wh~V~i~r~~~~~~l~VD~~~~~~~~~~~~~~~l~~~~~lyvGG~p~~~~~~~~~~~~~~F~G 292 (293)
. ...+|||+||+|.+.|.++.+.|.||+........+.....++....+||||+|+... ...+....+|+|
T Consensus 284 ~~~~~~~~l~DG~WH~V~v~~~~~~~~L~VD~~~~~~~~~~~~~~~l~~~~~lylGG~p~~~~-~~~~~~~~~F~G 358 (394)
T 1dyk_A 284 YDAEIPGHMCNGQWHKVTAKKIKNRLELVVDGNQVDAQSPNSASTSADTNDPVFVGGFPGGLN-QFGLTTNIRFRG 358 (394)
T ss_dssp ECCCSTTSTTSSSCEEEEEEEETTEEEEEETTEEEEEECCCTTCCCBCCCBCCEESCCCTTCC-CTTCSCCCCCEE
T ss_pred EecCCCccccCCceEEEEEEEeCCEEEEEECCcccccccCCCcceecccCCCEEEcCCCcccc-ccccccCCCCce
Confidence 2 5689999999999999999999999998554333333344567777899999998643 333455788987
No 3
>2wjs_A Laminin subunit alpha-2; integrin, secreted, coiled coil, glycoprotein, laminin EGF-like domain, extracellular matrix, laminin G-like domain; HET: NAG; 2.80A {Mus musculus}
Probab=100.00 E-value=9.5e-39 Score=304.15 Aligned_cols=276 Identities=19% Similarity=0.278 Sum_probs=201.9
Q ss_pred CCceeEEEEEEEeCCCCeEEEEeccCCCCCCCeEEEEEECCEEEEEEeCC----------------CCCCeEEEEeccEE
Q psy5026 4 SPQAWRFPIQFKPESWDGILFLTGERDDLNGDFMTLLIFEGYVEFSTPYR----------------PYADITVHRTVRTL 67 (293)
Q Consensus 4 ~~~~~~i~~~FrT~~~~GlL~~~~~~~~~~~~~~~l~l~~G~l~~~~~~g----------------~w~~~~~~~~~~~v 67 (293)
.....+|+|+|||.++||+|||.++.. ..||++|+|++|+|++.+++| +||.+.+.+..+.+
T Consensus 29 ~~~~~~isl~FrT~~~~glLly~~~~~--~~dfl~l~L~~G~l~~~~~~G~g~~~l~~~~~~~~dg~WH~V~v~r~~~~~ 106 (608)
T 2wjs_A 29 KGSYNNIVVHVKTAVADNLLFYLGSAK--FIDFLAIEMRKGKVSFLWDVGSGVGRVEYPDLTIDDSYWYRIEASRTGRNG 106 (608)
T ss_dssp CTTEEEEEEEEEESCSCEEEEEEECSS--CSCEEEEEEETTEEEEEEESSSCEEEEECCSCCCTTSCCEEEEEEEETTEE
T ss_pred CcccceEEEEEecCCCceEEEEeCCCC--CCcEEEEEEECCEEEEEEECCCCceEEeeCCccccCCceEEEEEEEeCCEE
Confidence 456789999999999999999999852 479999999999999988776 69999998888766
Q ss_pred EecccCC----------------CCceeeeecC--CceEEcCCCCCCCCCCCCCcccCceeeEEEEEEcCeeeeeccCCC
Q psy5026 68 ILPYTVP----------------SGLFSRITFR--EPVFVGGRGNTSGLSDKLPTEKGFKGCIRHLDINDHLYNFNVSPG 129 (293)
Q Consensus 68 ~l~~~g~----------------~~~~~~l~~~--~~l~iGG~p~~~~~~~~~~~~~~F~GCi~~~~~n~~~~~~~~~~~ 129 (293)
.|..++. ++....|+++ ..+||||+|.....+..+. ..+|+|||+++.+|++.+++....
T Consensus 107 ~l~Vd~~~~~~~~~~~~~~~~~~~g~~~~L~l~~~~~l~vGG~p~~~~~~~~~~-~~~F~GCi~~l~in~~~i~l~~~~- 184 (608)
T 2wjs_A 107 SISVRALDGPKASMVPSTYHSVSPPGYTILDVDANAMLFVGGLTGKIKKADAVR-VITFTGCMGETYFDNKPIGLWNFR- 184 (608)
T ss_dssp EEEEEESSSTTTTSCCCCEEEECCSSCCSCCCCSSCEEEESSCCTTSCCCTTCC-CCCCCEEECCCEESSSBC----CC-
T ss_pred EEEEecccCccccccccccccccCCcceeeccCCCCcEEeCCcCccccCCcccc-cCCccEEEEEEEECCEEccccccc-
Confidence 6533221 2333445554 6799999997644432222 478999999999999988775421
Q ss_pred CCcccccccccccccCCC-------CcCCc---ceeEecCCccceeeEEEEEEEEEeCCCCeEEEEeccCCCCCCCeEEE
Q psy5026 130 GDSLKGIDVALLRPATHY-------QVSSI---PDQVYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIAL 199 (293)
Q Consensus 130 ~~~~~~~~~~~C~pC~~~-------~~~~f---s~~~~~~~~~~~~~~~~i~~~frt~~~~GlLl~~~~~~~~~~~~l~l 199 (293)
.. .+.|.+|... +...| +|+.++...........|+|+|||.+++|+|||.+.... .+|++|
T Consensus 185 ----~~--~g~~~gC~~~p~~~~~~~~~~F~g~sy~~~~~~~~~~~~~~~isl~FrT~~~~GlLl~~~~~~~--~d~l~L 256 (608)
T 2wjs_A 185 ----EK--EGDCKGCTVSPQVEDSEGTIQFDGEGYALVSRPIRWYPNISTVMFKFRTFSSSALLMYLATRDL--KDFMSV 256 (608)
T ss_dssp ----EE--ESCCCCC--------CCCCEEEEEEEEEEEECCTTCBTTEEEEEEEEEESCSEEEEEEEECTTS--SSEEEE
T ss_pred ----cc--cCCCCCCCCCcccccCCcceEECCCcceEEeccccCCCcceEEEEEEEeCCCCeEEEEecCCCC--CceEEE
Confidence 11 1234445322 12346 788887422212246799999999999999999975443 799999
Q ss_pred EEeCCEEEEEEECCCceEEEEecCCCCCCCeEEEEEEEeCCEEEEEECCccc-----eeEecCCCccccc--CCCCeEEe
Q psy5026 200 YLNDRYVDFTFDLGTGAATLRSSNPISLGEWRKLRLTRTGRHAYLQVDRFPS-----SQILSPGPFTQLS--LSLSLYLG 272 (293)
Q Consensus 200 ~l~~g~v~~~~~~g~~~~~~~~~~~~~dg~wh~V~i~r~~~~~~l~VD~~~~-----~~~~~~~~~~~l~--~~~~lyvG 272 (293)
+|.+|+++++++.|++...+.+...++||+||+|.+.|.++.+.|.||+... .....++....++ ....+|||
T Consensus 257 ~L~~G~l~~~~~~g~~~~~l~s~~~~nDg~WH~V~v~r~~~~~~L~VD~~~~~~~~~~~~~~~g~~~~l~~~~~~~lylG 336 (608)
T 2wjs_A 257 ELSDGHVKVSYDLGSGMTSVVSNQNHNDGKWKAFTLSRIQKQANISIVDIDSNQEENVATSSSGNNFGLDLKADDKIYFG 336 (608)
T ss_dssp EEETTEEEEEEECSSCEEEEEEEEECCSSSCEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSSCCCCCCCTTCEEEES
T ss_pred EEECCEEEEEEECCCCcEEEEcCccccCCceEEEEEEEecceEEEEEeccccccccccccccCCccccccccCCCceEEe
Confidence 9999999999999988877888788999999999999999999999997532 2333444444565 35789999
Q ss_pred ccCCCCccCCCCCcCCCcee
Q psy5026 273 GVPDYNIVSPKVKIKSSFIG 292 (293)
Q Consensus 273 G~p~~~~~~~~~~~~~~F~G 292 (293)
|+|....+.. .....+|+|
T Consensus 337 G~p~~~~~~~-~~~~~~F~G 355 (608)
T 2wjs_A 337 GLPTLRNLRP-EVNVKKYSG 355 (608)
T ss_dssp CCCCCSCCCT-TCCCCCCEE
T ss_pred ccCcccccCc-ccccCCceE
Confidence 9998654322 234678987
No 4
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=100.00 E-value=3.7e-38 Score=286.64 Aligned_cols=269 Identities=20% Similarity=0.412 Sum_probs=193.1
Q ss_pred CCceeEEEEEEEeCCCCeEEEEeccCCCCCCCeEEEEEECCEEEEEEeCC-----------------CCCCeEEEEeccE
Q psy5026 4 SPQAWRFPIQFKPESWDGILFLTGERDDLNGDFMTLLIFEGYVEFSTPYR-----------------PYADITVHRTVRT 66 (293)
Q Consensus 4 ~~~~~~i~~~FrT~~~~GlL~~~~~~~~~~~~~~~l~l~~G~l~~~~~~g-----------------~w~~~~~~~~~~~ 66 (293)
.+.+++|+|+|||.+++|+|||.++. ..||++|+|.+|+|++.++.| +||.+.+.+..+.
T Consensus 24 ~~~~~~is~~frT~~~~GlLly~~~~---~~dfi~l~L~~G~l~~~~~~G~g~~~~~~~s~~~vnDg~WH~V~v~r~~~~ 100 (410)
T 3asi_A 24 AYTSMHLFFQFKTTSLDGLILYNSGD---GNDFIVVELVKGYLHYVFDLGNGANLIKGSSNKPLNDNQWHNVMISRDTSN 100 (410)
T ss_dssp CSSCEEEEEEEECSCSCEEEEEEEBS---TTCEEEEEEETTEEEEEEESSSCEEEEECCCSSCSCSSSCEEEEEEECTTC
T ss_pred CCceEEEEEEEEeCCCCeEEEEeCCC---CCCEEEEEEECCEEEEEEECCCCcEEEEeccCcEeCCCCeEEEEEEEcCCc
Confidence 46789999999999999999998764 369999999999999987765 6999998887643
Q ss_pred -EEecccCC------CCceeeeecCCceEEcCCCCCC--CCCCCCCcccCceeeEEEEEEcCeeeeeccCCCC---Cccc
Q psy5026 67 -LILPYTVP------SGLFSRITFREPVFVGGRGNTS--GLSDKLPTEKGFKGCIRHLDINDHLYNFNVSPGG---DSLK 134 (293)
Q Consensus 67 -v~l~~~g~------~~~~~~l~~~~~l~iGG~p~~~--~~~~~~~~~~~F~GCi~~~~~n~~~~~~~~~~~~---~~~~ 134 (293)
+.|..++. .+ ...+++..++||||+|... .++.......+|+|||+++.+|++.+++...... ....
T Consensus 101 ~~~l~VD~~~~~~~~~~-~~~l~~~~~lyvGG~p~~~~~~~~~~~~~~~~F~GCi~~l~ing~~~dl~~~~~~~~~~v~~ 179 (410)
T 3asi_A 101 LHTVKIDTKITTQITAG-ARNLDLKSDLYIGGVAKETYKSLPKLVHAKEGFQGCLASVDLNGRLPDLISDALFCNGQIER 179 (410)
T ss_dssp EEEEEETTEEEEEECTT-CCCCCBCSCEEESCCCGGGGGGSCTTCCCSSBCCEEEEEEESSSCCCCTTTTCSEEESSEEE
T ss_pred eEEEEECCEeceeccCC-ccceecCCceEECccccchhhhhhhhcccccCchhheeheeeCCcccCchhhhhccCCccCC
Confidence 34433321 12 2457777899999998742 1222233457899999999999998877542211 1122
Q ss_pred ccc--ccccc--ccCCCCc------------C--C--------------c----ceeEecCCcc--ceeeEEEEEEEEEe
Q psy5026 135 GID--VALLR--PATHYQV------------S--S--------------I----PDQVYQGLGE--QYLSLLDLTIVFKA 176 (293)
Q Consensus 135 ~~~--~~~C~--pC~~~~~------------~--~--------------f----s~~~~~~~~~--~~~~~~~i~~~frt 176 (293)
+|. ...|. ||.+++. + . | +|+.|..... .......++|.|||
T Consensus 180 gC~~~~~~C~~~pC~n~g~C~~~~~~~~C~C~~~~~~G~~C~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~i~l~frT 259 (410)
T 3asi_A 180 GCEGPSTTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDPGTTYIFSKGGGQITYKWPPNDRPSTRADRLAIGFST 259 (410)
T ss_dssp SCCCCSSCCCTTSSSTTCEEEECSSSEEEECTTTSEESTTSCEECCEEEEEEEEEEEEEECCTTCCCCBSEEEEEEEEEC
T ss_pred CCCCCCCCcccccCCCCCEecCCCCCceEeccCCcccCCCCCCCcccccccCCCceEEEecCCCCCccceeeEEEEEEEe
Confidence 332 13454 7776541 0 1 2 4555532211 11234689999999
Q ss_pred CCCCeEEEEeccCCCCCCCeEEEEEeCCEEEEEEECCCceEEEEe-cCCCCCCCeEEEEEEEeCCEEEEEECCccceeEe
Q psy5026 177 IEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRS-SNPISLGEWRKLRLTRTGRHAYLQVDRFPSSQIL 255 (293)
Q Consensus 177 ~~~~GlLl~~~~~~~~~~~~l~l~l~~g~v~~~~~~g~~~~~~~~-~~~~~dg~wh~V~i~r~~~~~~l~VD~~~~~~~~ 255 (293)
.+++|+|||+.... +..+|++|+|.+|+++++++.|.+...++. ...++||+||+|.+.|.++.+.|.||+.......
T Consensus 260 ~~~~GlLl~~~~~~-~~~~~l~l~L~~G~l~~~~~~g~~~~~~~~~~~~l~DG~wH~V~v~r~~~~~~L~VD~~~~~~~~ 338 (410)
T 3asi_A 260 VQKEAVLVRVDSSS-GLGDYLELHIHQGKIGVKFNVGTDDIAIEESNAIINDGKYHVVRFTRSGGNATLQVDSWPVIERY 338 (410)
T ss_dssp CCSEEEEEEEEECT-TCCCEEEEEEETTEEEEEEESSSSCEEEECCSCCCCSSSCEEEEEEEETTEEEEEETTSCCEEEC
T ss_pred CCCCEEEEEEecCC-CCCceEEEEEeCCEEEEEEECCCCceEEecCccCcCCCCeEEEEEEEECCEEEEEECCcceeccc
Confidence 99999999986532 126899999999999999999987777765 4789999999999999999999999998654443
Q ss_pred cCCC-cccccCCCCeEEeccCCC
Q psy5026 256 SPGP-FTQLSLSLSLYLGGVPDY 277 (293)
Q Consensus 256 ~~~~-~~~l~~~~~lyvGG~p~~ 277 (293)
.++. ...++....+||||+|+.
T Consensus 339 ~~g~~~~~~~~~~~lylGG~p~~ 361 (410)
T 3asi_A 339 PAGRQLTIFNSQATIIIGGKEQG 361 (410)
T ss_dssp CSSCCCCCBCCEEEEEESSTTTT
T ss_pred CCCccceeeeccceEEECCcccC
Confidence 3332 223455678999999863
No 5
>1h30_A GAS6, growth-arrest-specific protein; laminin G-domain protein, vitamin K-dependent protein, AXL/SKY/MER ligand, laminin G- like domain; 2.2A {Homo sapiens} SCOP: b.29.1.4 b.29.1.4 PDB: 2c5d_A*
Probab=100.00 E-value=8.7e-37 Score=278.51 Aligned_cols=271 Identities=15% Similarity=0.162 Sum_probs=183.0
Q ss_pred CceeEEEEEEEeCCCCeEEEEeccCCCCCCCeEEEEEECCEEEEEEeCC---------------CCCCeEEEEeccEEEe
Q psy5026 5 PQAWRFPIQFKPESWDGILFLTGERDDLNGDFMTLLIFEGYVEFSTPYR---------------PYADITVHRTVRTLIL 69 (293)
Q Consensus 5 ~~~~~i~~~FrT~~~~GlL~~~~~~~~~~~~~~~l~l~~G~l~~~~~~g---------------~w~~~~~~~~~~~v~l 69 (293)
..+++|+|+|||.+++|+|||.++.. ..||++|+|.+|+|++.++.| +||.+.+.+..+.+.|
T Consensus 60 ~~~~~is~~FrT~~~~GlLly~~~~~--~~df~~l~L~~G~l~~~~~~g~~~~~~~~~~~~nDg~WH~V~v~r~~~~~~L 137 (422)
T 1h30_A 60 PTRLVAEFDFRTFDPEGILLFAGGHQ--DSTWIVLALRAGRLELQLRYNGVGRVTSSGPVINHGMWQTISVEELARNLVI 137 (422)
T ss_dssp CCCCEEEEEEEECCSSEEEEEEESCT--TSEEEEEEEETTEEEEEEEETTEEEEEEEEEECCSSCCEEEEEEECSSEEEE
T ss_pred CCceEEEEEEEeCCCCeEEEEECCCC--CCcEEEEEEECCEEEEEEECCCCcEEEecCceecCCCCEEEEEEEcCCEEEE
Confidence 46789999999999999999999842 369999999999999976654 7999999998887777
Q ss_pred cccCC-------CCceeeee---cCCceEEcCCCCCCCCCCCCCcccCceeeEEEEEEcCe-eeeeccCCCCCccccccc
Q psy5026 70 PYTVP-------SGLFSRIT---FREPVFVGGRGNTSGLSDKLPTEKGFKGCIRHLDINDH-LYNFNVSPGGDSLKGIDV 138 (293)
Q Consensus 70 ~~~g~-------~~~~~~l~---~~~~l~iGG~p~~~~~~~~~~~~~~F~GCi~~~~~n~~-~~~~~~~~~~~~~~~~~~ 138 (293)
..++. ++....++ ....+||||+|..... ...+...+|+|||+++.+|+. .+++... .....+
T Consensus 138 ~VD~~~~~~~~~~g~~~~l~~~~~~~~lyvGG~p~~~~~-~~~~~~~~F~GCi~~v~i~~~~~~~l~~~-----~~~~~~ 211 (422)
T 1h30_A 138 KVNRDAVMKIAVAGDLFQPERGLYHLNLTVGGIPFHEKD-LVQPINPRLDGCMRSWNWLNGEDTTIQET-----VKVNTR 211 (422)
T ss_dssp EETTEEEEEEECCSCSSEEETTEEECEEEESSCSSCGGG-SSSCCCCCCCEEEEEEEEC---------C-----CCCCGG
T ss_pred EECCeeeEEeecCCcccccccccccceEEEecCcccccc-cccccCCCCeEEEEEeEECCccccchhhh-----hhcccC
Confidence 54432 34445566 5679999999976532 223456789999999999655 4455331 111123
Q ss_pred ccccccCCCCcC--Cc---ceeEecCCcc--------ceeeEEEEEEEEEeCCCCeEEEEeccCCCCCCCeEEEEEeCCE
Q psy5026 139 ALLRPATHYQVS--SI---PDQVYQGLGE--------QYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRY 205 (293)
Q Consensus 139 ~~C~pC~~~~~~--~f---s~~~~~~~~~--------~~~~~~~i~~~frt~~~~GlLl~~~~~~~~~~~~l~l~l~~g~ 205 (293)
..|. ..-.+ .| +|+.|+.... .....+.|+|+|||++++|+|||..... ...+|++|+|.+|+
T Consensus 212 ~~C~---~~~~~g~~F~g~s~~~~~~~~~~lp~~~~~~~~~~~~is~~fRT~~~~GlLl~~~~~~-~~~d~l~l~L~~G~ 287 (422)
T 1h30_A 212 MQCF---SVTERGSFYPGSGFAFYSLDYMRTPLDVGTESTWEVEVVAHIRPAADTGVLFALWAPD-LRAVPLSVALVDYH 287 (422)
T ss_dssp GSEE---SSCBSSEEECSSCCEEECCCCBC--------CCBCEEEEEEEEESSSCEEEEEEEEGG-GTEEEEEEEEESCC
T ss_pred CCCC---CcCCCCceECCCeEEEEecCccccccccccccccceEEEEEEecCCCCEEEEEecCCC-cCCCcEEEEEEcCc
Confidence 3343 22111 24 7888864211 1113679999999999999999986421 01479999999998
Q ss_pred E-------EEEEECCCceEEEEecCCCCCCCeEEE--EEEEeCCEEEEEECCccceeEecC----CCc----ccccCCCC
Q psy5026 206 V-------DFTFDLGTGAATLRSSNPISLGEWRKL--RLTRTGRHAYLQVDRFPSSQILSP----GPF----TQLSLSLS 268 (293)
Q Consensus 206 v-------~~~~~~g~~~~~~~~~~~~~dg~wh~V--~i~r~~~~~~l~VD~~~~~~~~~~----~~~----~~l~~~~~ 268 (293)
+ .+.++.+.+. .++.+..+|||+||+| ++.|+++. |+||+........+ +.. ..++..+.
T Consensus 288 le~~~~~~~l~~~~~~g~-~~~~~~~l~DG~WH~V~~~l~~~~~~--L~vD~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 364 (422)
T 1h30_A 288 STKKLKKQLVVLAVEHTA-LALMEIKVCDGQEHVVTVSLRDGEAT--LEVDGTRGQSEVSAAQLQERLAVLERHLRSPVL 364 (422)
T ss_dssp -----CCCEEEEEETTEE-EEEEECCTTSSCCEEEEEEEETTEEE--EEETTEECEESSCHHHHHHHHHHHHHHHTSCCE
T ss_pred cccccccceEEEEeCCee-EEEeeecccCCCEeEeEEEEEEeccE--EEEeCCccceeechhhcccchhhhhhhhccCCc
Confidence 7 4666666654 3444578999999999 77776655 99998754322111 111 11456778
Q ss_pred eEEeccCCCCccCCCCCcCCCcee
Q psy5026 269 LYLGGVPDYNIVSPKVKIKSSFIG 292 (293)
Q Consensus 269 lyvGG~p~~~~~~~~~~~~~~F~G 292 (293)
+||||+|+... ...+...+|+|
T Consensus 365 lyiGG~p~~~~--~~~~~~~~F~G 386 (422)
T 1h30_A 365 TFAGGLPDVPV--TSAPVTAFYRG 386 (422)
T ss_dssp EEESCCCSCCT--TSSSCCSBCCE
T ss_pred eEEcccCCCCc--cccCccCCccc
Confidence 99999998532 22345677887
No 6
>2wjs_A Laminin subunit alpha-2; integrin, secreted, coiled coil, glycoprotein, laminin EGF-like domain, extracellular matrix, laminin G-like domain; HET: NAG; 2.80A {Mus musculus}
Probab=100.00 E-value=1.8e-35 Score=281.53 Aligned_cols=269 Identities=19% Similarity=0.270 Sum_probs=190.2
Q ss_pred CceeEEEEEEEeCCCCeEEEEeccCCCCCCCeEEEEEECCEEEEEEeCC---------------CCCCeEEEEeccEEEe
Q psy5026 5 PQAWRFPIQFKPESWDGILFLTGERDDLNGDFMTLLIFEGYVEFSTPYR---------------PYADITVHRTVRTLIL 69 (293)
Q Consensus 5 ~~~~~i~~~FrT~~~~GlL~~~~~~~~~~~~~~~l~l~~G~l~~~~~~g---------------~w~~~~~~~~~~~v~l 69 (293)
....+|+|+|||.+++|+|||.+... ..||++|+|++|+|++.++.| +||.+.+.+..+.+.|
T Consensus 224 ~~~~~isl~FrT~~~~GlLl~~~~~~--~~d~l~L~L~~G~l~~~~~~g~~~~~l~s~~~~nDg~WH~V~v~r~~~~~~L 301 (608)
T 2wjs_A 224 PNISTVMFKFRTFSSSALLMYLATRD--LKDFMSVELSDGHVKVSYDLGSGMTSVVSNQNHNDGKWKAFTLSRIQKQANI 301 (608)
T ss_dssp TTEEEEEEEEEESCSEEEEEEEECTT--SSSEEEEEEETTEEEEEEECSSCEEEEEEEEECCSSSCEEEEEEEETTEEEE
T ss_pred CcceEEEEEEEeCCCCeEEEEecCCC--CCceEEEEEECCEEEEEEECCCCcEEEEcCccccCCceEEEEEEEecceEEE
Confidence 35789999999999999999997532 369999999999999977655 7999999888876666
Q ss_pred cccCC------------CCceeeee--cCCceEEcCCCCCCCCCCCCCcccCceeeEEEEEEcCeeeeeccCCCCCcccc
Q psy5026 70 PYTVP------------SGLFSRIT--FREPVFVGGRGNTSGLSDKLPTEKGFKGCIRHLDINDHLYNFNVSPGGDSLKG 135 (293)
Q Consensus 70 ~~~g~------------~~~~~~l~--~~~~l~iGG~p~~~~~~~~~~~~~~F~GCi~~~~~n~~~~~~~~~~~~~~~~~ 135 (293)
..++. ++....++ ....+||||+|....... .....+|+|||++|.+|++.+++.... ..
T Consensus 302 ~VD~~~~~~~~~~~~~~~g~~~~l~~~~~~~lylGG~p~~~~~~~-~~~~~~F~GCi~~v~in~~~~~l~~~~-----~~ 375 (608)
T 2wjs_A 302 SIVDIDSNQEENVATSSSGNNFGLDLKADDKIYFGGLPTLRNLRP-EVNVKKYSGCLKDIEISRTPYNILSSP-----DY 375 (608)
T ss_dssp EEEETTTCCEEEEEEECCSSCCCCCCCTTCEEEESCCCCCSCCCT-TCCCCCCEEEEEEEEETTEEECGGGCS-----SC
T ss_pred EEeccccccccccccccCCccccccccCCCceEEeccCcccccCc-ccccCCceEEeeeEEECCEecCccccc-----cc
Confidence 43321 12233455 357999999998654321 223579999999999999999886531 11
Q ss_pred ccc-ccccccCCCC--cCCc---ceeEecCCccceeeEEEEEEEEEeCCCCeEEEEeccCCCCCCCeEEEEEeCCEEEEE
Q psy5026 136 IDV-ALLRPATHYQ--VSSI---PDQVYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFT 209 (293)
Q Consensus 136 ~~~-~~C~pC~~~~--~~~f---s~~~~~~~~~~~~~~~~i~~~frt~~~~GlLl~~~~~~~~~~~~l~l~l~~g~v~~~ 209 (293)
.++ ..|. ... ...| +|+.++..... ....|+|.|||++++|+|||+.... .+|++|+|.+|++.++
T Consensus 376 ~~v~~gC~---~~~~~~~~F~~~g~~~~~~~~~~--~~~~i~~~FRT~~~~GlLl~~~~~~---~~~l~l~L~~G~l~~~ 447 (608)
T 2wjs_A 376 VGVTKGCS---LENVYTVSFPKPGFVELAAVSID--VGTEINLSFSTRNESGIILLGSGGG---QAYYAIFLNKGRLEVH 447 (608)
T ss_dssp EEEEESCC---CCCTTEEECSSSCEEEECCCCBC--TTEEEEEEEEESCSSEEEEEEC------CCEEEEEEETTEEEEE
T ss_pred cccccCCC---cccccccccCCCCeEEecCccCC--CCcEEEEEEEeCCCCeEEEEEcCCC---CceEEEEEECCEEEEE
Confidence 122 2343 211 1245 79998754332 4578999999999999999997643 7899999999999999
Q ss_pred EECCCce---EEEEe-cCCCCCCCeEEEEEEEeCCEEEEEECCccceeEecCCCcccccCCCCeEEeccCCCCccCCCCC
Q psy5026 210 FDLGTGA---ATLRS-SNPISLGEWRKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQLSLSLSLYLGGVPDYNIVSPKVK 285 (293)
Q Consensus 210 ~~~g~~~---~~~~~-~~~~~dg~wh~V~i~r~~~~~~l~VD~~~~~~~~~~~~~~~l~~~~~lyvGG~p~~~~~~~~~~ 285 (293)
++.|.+. +.+.+ ...+|||+||+|.+.|.++.+.|.||+...... .......++. ..+||||+|+.... ....
T Consensus 448 ~~~g~~~~~~~~l~~~~~~l~DG~WH~V~v~~~~~~~~L~VD~~~~~~~-~~~~~~~l~~-~~lylGG~p~~~~~-~~~~ 524 (608)
T 2wjs_A 448 LSSGTRTMRKIVIKPEPNRFHDGREHSVHVERTRGIFTVQIDEDRRHMQ-NLTEEQPIEV-KKLFVGGAPPEFQP-SPLR 524 (608)
T ss_dssp EEC----CEEEEECCCSSCSSSSSCEEEEEEECSSEEEEEESSSCCEEE-ECCCCSCBCC-SCEEESCCCC---------
T ss_pred EECCCCceeEEEEeCCCcccCCCCeEEEEEEEeCCEEEEEECCcccccc-cCCccccccc-CceEEeCCCccccc-cccc
Confidence 9998753 34443 678999999999999999999999999865332 2222333443 58999999986432 2234
Q ss_pred cCCCcee
Q psy5026 286 IKSSFIG 292 (293)
Q Consensus 286 ~~~~F~G 292 (293)
...+|+|
T Consensus 525 ~~~~F~G 531 (608)
T 2wjs_A 525 NIPAFQG 531 (608)
T ss_dssp CCCCCCE
T ss_pred cCCCCcE
Confidence 5678887
No 7
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=100.00 E-value=1.7e-35 Score=300.89 Aligned_cols=275 Identities=21% Similarity=0.418 Sum_probs=206.7
Q ss_pred eeEEEEEEEeCCCCeEEEEeccCCCCCCCeEEEEEECCEEEEEEeCC------------------CCCCeEEEEeccEEE
Q psy5026 7 AWRFPIQFKPESWDGILFLTGERDDLNGDFMTLLIFEGYVEFSTPYR------------------PYADITVHRTVRTLI 68 (293)
Q Consensus 7 ~~~i~~~FrT~~~~GlL~~~~~~~~~~~~~~~l~l~~G~l~~~~~~g------------------~w~~~~~~~~~~~v~ 68 (293)
+..|+|+|||.+++|+|||.++. .||++|+|++|+|++.+++| +||.+.+.+..+.+.
T Consensus 255 ~~~i~l~FrT~~~~GlLl~~g~~----~d~l~L~L~~G~l~l~~~lG~g~~~~~~~~~~~~l~Dg~WH~V~v~r~~~~~~ 330 (1245)
T 3qcw_A 255 SDEITLSFKTLQRNGLMLHTGKS----ADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNAWHDVKVTRNLRQVT 330 (1245)
T ss_dssp EEEEEEEEECSCSCEEEEEECSS----SEEEEEEEETTEEEEEEEESSCCEEEEECCCSSCSSSSSCEEEEEEEETTEEE
T ss_pred ccEEEEEEEeCCCCceEEEecCC----CCEEEEEEECCEEEEEEEcCCCeEEEEEccCCcccCCCCEEEEEEEEeCCEEE
Confidence 46899999999999999999764 49999999999999987754 699999999888877
Q ss_pred ecccCC-------CCceeeeecCCceEEcCCCCCCCCCCCCCcccCceeeEEEEEEcCeeeeeccCCC---CCcc---cc
Q psy5026 69 LPYTVP-------SGLFSRITFREPVFVGGRGNTSGLSDKLPTEKGFKGCIRHLDINDHLYNFNVSPG---GDSL---KG 135 (293)
Q Consensus 69 l~~~g~-------~~~~~~l~~~~~l~iGG~p~~~~~~~~~~~~~~F~GCi~~~~~n~~~~~~~~~~~---~~~~---~~ 135 (293)
|..++. ++....++.+..+||||+|....++. .+...+|+|||+++.+|++.+++....+ +.+. .+
T Consensus 331 l~VD~~~~~~~~~~~~~~~l~~~~~l~vGG~p~~~~~~~-~~~~~~F~GCi~~l~~n~~~i~l~~~~~~~~~~~~~~~~g 409 (1245)
T 3qcw_A 331 ISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPG-SPVSNNFMGCLKEVVYKNNDVRLELSRLAKQGDPKMKIHG 409 (1245)
T ss_dssp EEESSSCCEEEECSSSCCCEEECSEEEESCCSSTTTSTT-CCCCCCCCEEEEEEEEEESSCEECHHHHHHSCCTTEEEES
T ss_pred EEECCcceeeeecCCCcccccCCCCEEECCcCChhhccC-CccCCCceeEeeeeEECCccccccchhhhhcCCCccccCC
Confidence 755442 34456677778899999997654432 3446799999999999999876532111 1110 11
Q ss_pred cccccccccCCC---CcCCc----ceeEecCCccceeeEEEEEEEEEeCCCCeEEEEeccCC----------CCCCCeEE
Q psy5026 136 IDVALLRPATHY---QVSSI----PDQVYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRA----------DGVGDFIA 198 (293)
Q Consensus 136 ~~~~~C~pC~~~---~~~~f----s~~~~~~~~~~~~~~~~i~~~frt~~~~GlLl~~~~~~----------~~~~~~l~ 198 (293)
.... .|... .+.+| ||+.++.+.. ....+|+|+|||.+++|||||..... ....+|++
T Consensus 410 ~~~~---~C~~~~~~~~vsF~~~~syl~lp~~~~--~~~~~is~~FrT~~~~GlLly~~~~~~~~~~~~~~~~~~~df~~ 484 (1245)
T 3qcw_A 410 VVAF---KCENVATLDPITFETPESFISLPKWNA--KKTGSISFDFRTTEPNGLILFSHGKPRHQKDAKHPQMIKVDFFA 484 (1245)
T ss_dssp SCCC---CCSCCCCCCCEEECSTTCCEEECCCCC--SSEEEEEEEEECCCSCEEEEEEECCCCSSCCSSCTTSCCCCEEE
T ss_pred ceee---cccCCCccccceeCCCCeEEEecCCCc--cCceEEEEEEEeCCCCeEEEEecCccccccccccccccCCCEEE
Confidence 1112 44332 12345 8999987643 34679999999999999999986432 12368999
Q ss_pred EEEeCCEEEEEEECCCceEEEE-ecCCCCCCCeEEEEEEEeCCEEEEEECCccceeEecCCCcccccCCCCeEEeccCCC
Q psy5026 199 LYLNDRYVDFTFDLGTGAATLR-SSNPISLGEWRKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQLSLSLSLYLGGVPDY 277 (293)
Q Consensus 199 l~l~~g~v~~~~~~g~~~~~~~-~~~~~~dg~wh~V~i~r~~~~~~l~VD~~~~~~~~~~~~~~~l~~~~~lyvGG~p~~ 277 (293)
|+|.+|++.++++.|++...++ +...++||+||+|.+.|.++.+.|+||+... ....++....+++.+.+||||+|..
T Consensus 485 LeL~~G~l~l~~~~G~g~~~l~~s~~~vnDG~WH~V~l~r~~~~~~L~VD~~~~-~~~~~~~~~~l~~~~~lylGG~p~~ 563 (1245)
T 3qcw_A 485 IEMLDGHLYLLLDMGSGTIKIKALQKKVNDGEWYHVDFQRDGRSGTISVNTLRT-PYTAPGESEILDLDDELYLGGLPEN 563 (1245)
T ss_dssp EEEETTEEEEEEESSSCEEEEESCSSCCCSSCCEEEEEEEETTEEEEEETTEEE-EEECSSSCCCCCCCSCEEESSCCSS
T ss_pred EEEeCCeEEEEEECCCCeEEEeecccEecCCCEEEEEEEEecCEEEEEEccccc-ccccCCCcceeccCCceEEcccccc
Confidence 9999999999999998887776 5778999999999999999999999999843 3445556667888889999999975
Q ss_pred Cc---cCCCC---CcCCCcee
Q psy5026 278 NI---VSPKV---KIKSSFIG 292 (293)
Q Consensus 278 ~~---~~~~~---~~~~~F~G 292 (293)
.. ++..+ ....+|.|
T Consensus 564 ~~~~~~p~~~~~~~~~~gF~G 584 (1245)
T 3qcw_A 564 KAGLVFPTEVWTALLNYGYVG 584 (1245)
T ss_dssp CTTCCCCTTCHHHHTTCBCCE
T ss_pred cccccccccccccccccCceE
Confidence 42 12111 12568887
No 8
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=100.00 E-value=6.3e-32 Score=274.82 Aligned_cols=283 Identities=19% Similarity=0.298 Sum_probs=202.5
Q ss_pred CCceeEEEEEEEeCCCCeEEEEeccCC----------CCCCCeEEEEEECCEEEEEEeCC----------------CCCC
Q psy5026 4 SPQAWRFPIQFKPESWDGILFLTGERD----------DLNGDFMTLLIFEGYVEFSTPYR----------------PYAD 57 (293)
Q Consensus 4 ~~~~~~i~~~FrT~~~~GlL~~~~~~~----------~~~~~~~~l~l~~G~l~~~~~~g----------------~w~~ 57 (293)
.+..++|+|+|||.+++|||||.++.. ....||++|+|.+|+|++.++.| +||.
T Consensus 440 ~~~~~~is~~FrT~~~~GlLly~~~~~~~~~~~~~~~~~~~df~~LeL~~G~l~l~~~~G~g~~~l~~s~~~vnDG~WH~ 519 (1245)
T 3qcw_A 440 AKKTGSISFDFRTTEPNGLILFSHGKPRHQKDAKHPQMIKVDFFAIEMLDGHLYLLLDMGSGTIKIKALQKKVNDGEWYH 519 (1245)
T ss_dssp CSSEEEEEEEEECCCSCEEEEEEECCCCSSCCSSCTTSCCCCEEEEEEETTEEEEEEESSSCEEEEESCSSCCCSSCCEE
T ss_pred ccCceEEEEEEEeCCCCeEEEEecCccccccccccccccCCCEEEEEEeCCeEEEEEECCCCeEEEeecccEecCCCEEE
Confidence 456789999999999999999997532 13469999999999999977654 7999
Q ss_pred eEEEEeccEEEecccCC------CCceeeeecCCceEEcCCCCCCCC---CCCC---CcccCceeeEEEEEEcCeeeeec
Q psy5026 58 ITVHRTVRTLILPYTVP------SGLFSRITFREPVFVGGRGNTSGL---SDKL---PTEKGFKGCIRHLDINDHLYNFN 125 (293)
Q Consensus 58 ~~~~~~~~~v~l~~~g~------~~~~~~l~~~~~l~iGG~p~~~~~---~~~~---~~~~~F~GCi~~~~~n~~~~~~~ 125 (293)
+.+.+..+.+.|..++. ++....++...++||||+|..... +... ....+|.|||++|.+|++.+++.
T Consensus 520 V~l~r~~~~~~L~VD~~~~~~~~~~~~~~l~~~~~lylGG~p~~~~~~~~p~~~~~~~~~~gF~GCir~l~ing~~~dl~ 599 (1245)
T 3qcw_A 520 VDFQRDGRSGTISVNTLRTPYTAPGESEILDLDDELYLGGLPENKAGLVFPTEVWTALLNYGYVGCIRDLFIDGQSKDIR 599 (1245)
T ss_dssp EEEEEETTEEEEEETTEEEEEECSSSCCCCCCCSCEEESSCCSSCTTCCCCTTCHHHHTTCBCCEEEEEEEETTEEECHH
T ss_pred EEEEEecCEEEEEEcccccccccCCCcceeccCCceEEcccccccccccccccccccccccCceEEEEEEEECCEEcCch
Confidence 99988888766654432 334456788889999999975431 1100 12478999999999999999886
Q ss_pred cCCC--C--Ccccccc---ccccc--ccCCCCc------------C--Cc-----------------ceeEecCCcccee
Q psy5026 126 VSPG--G--DSLKGID---VALLR--PATHYQV------------S--SI-----------------PDQVYQGLGEQYL 165 (293)
Q Consensus 126 ~~~~--~--~~~~~~~---~~~C~--pC~~~~~------------~--~f-----------------s~~~~~~~~~~~~ 165 (293)
.... . ....+|. ...|. ||.+++. + .| +|+.+........
T Consensus 600 ~~~~~~~~~gv~~gC~~~~~~~C~~~pC~ngg~C~~~~~~~~C~C~~~g~~G~~C~~~~~~~~fdGs~~l~~~~~~~~~~ 679 (1245)
T 3qcw_A 600 QMAEVQSTAGVKPSCSRETAKPCLSNPCKNNGMCRDGWNRYVCDCSGTGYLGRSCEREATVLSYDGSMFMKIQLPVVMHT 679 (1245)
T ss_dssp HHTTTTTCTTEESSCCCCSSCGGGSCCCCTTCEEEECSSSEEEECTTTTEESTTSCEECCEEEEESSCCEEEEEEEEEEE
T ss_pred hhhhhhccccccccccccCCCCCCccCCCCCCEEeCCCCCeEEECCCCCcccccCcccccccccCCCCceEEeccccccc
Confidence 3210 1 1122343 13454 7777642 1 11 2333221111112
Q ss_pred eEEEEEEEEEeCCCCeEEEEeccCCCCCCCeEEEEEeCCEEEEEEECCCceEEEEecCCCCCCCeEEEEEEEeCCEEEEE
Q psy5026 166 SLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSNPISLGEWRKLRLTRTGRHAYLQ 245 (293)
Q Consensus 166 ~~~~i~~~frt~~~~GlLl~~~~~~~~~~~~l~l~l~~g~v~~~~~~g~~~~~~~~~~~~~dg~wh~V~i~r~~~~~~l~ 245 (293)
....|++.|||..++|+|||...... .+|++|+|.+|+++++++.|.+...+.....++||+||+|.+.|.++.+.|.
T Consensus 680 ~~~~isl~FrT~~~~GlLl~~~~~~~--~d~l~L~L~~G~l~l~~nlg~g~~~~~~~~~~~DG~WH~V~v~r~~~~~~l~ 757 (1245)
T 3qcw_A 680 EAEDVSLRFRSQRAYGILMATTSRDS--ADTLRLELDAGRVKLTVNLGKGPETLFAGYNLNDNEWHTVRVVRRGKSLKLT 757 (1245)
T ss_dssp SEEEEEEEEECSSSCEEEEEEEBTTB--SCEEEEEEETTEEEEEEESSSSEEEEEECSCCCSSSCEEEEEEEETTEEEEE
T ss_pred ccceEEEEEEEcCCCEEEEEecCCCC--ccEEEEEEeCCEEEEEEECCCCceEEEeCccccCCCcEEEEEEEeCCEEEEE
Confidence 35689999999999999999876543 7899999999999999999988877788888999999999999999999999
Q ss_pred ECCccceeEecCCCcccccCCCCeEEeccCCCCccCCCCCcCCCcee
Q psy5026 246 VDRFPSSQILSPGPFTQLSLSLSLYLGGVPDYNIVSPKVKIKSSFIG 292 (293)
Q Consensus 246 VD~~~~~~~~~~~~~~~l~~~~~lyvGG~p~~~~~~~~~~~~~~F~G 292 (293)
||+........++....++.. .+|.|+++....++ ....+|+|
T Consensus 758 vD~~~~~~g~~~g~~~~l~~~-~~~~G~~~~~~~~~---~~~~~F~G 800 (1245)
T 3qcw_A 758 VDDQQAMTGQMAGDHTRLEFH-NIETGIITERRYLS---SVPSNFIG 800 (1245)
T ss_dssp ETTSCCEEEECSSSCCCEEEE-EEEESSCCCCTTCS---CCCCCCEE
T ss_pred ECCccceeEecCCCcceeecc-cccccccccccccC---CCCCCCEE
Confidence 999866556566554444443 47888887643222 12357876
No 9
>3pve_A Agrin, AGRN protein; mRNA splicing, structural genomics, PSI-2, protein structure initiative; 1.40A {Mus musculus}
Probab=99.92 E-value=6.8e-24 Score=172.52 Aligned_cols=140 Identities=41% Similarity=0.716 Sum_probs=114.0
Q ss_pred ceeEecCCcc---ceeeEEEEEEEEEeCCCCeEEEEeccCCCCCCCeEEEEEeCCEEEEEEECCCceEEEEecCCCCCCC
Q psy5026 153 PDQVYQGLGE---QYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSNPISLGE 229 (293)
Q Consensus 153 s~~~~~~~~~---~~~~~~~i~~~frt~~~~GlLl~~~~~~~~~~~~l~l~l~~g~v~~~~~~g~~~~~~~~~~~~~dg~ 229 (293)
||+.|+.... .....+.|+|+|||..++|+|||.+....+..+|++|+|.+|++.++++.|++...+++...++||+
T Consensus 18 syl~~~~~~~~~~~~~~~~~isl~frT~~~~GlLl~~~~~~~~~~d~l~l~L~~G~l~~~~~~G~g~~~l~s~~~l~Dg~ 97 (189)
T 3pve_A 18 SYLELKGLHTFERDLGEKMALEMVFLARGPSGLLLYNGQKTDGKGDFVSLALHNRHLEFRYDLGKGAAIIRSKEPIALGT 97 (189)
T ss_dssp CEEEECCGGGC-------CEEEEEEEESSSCEEEEEEESCC-CCSCEEEEEEETTEEEEEEESSSCEEEEECSSCCCTTS
T ss_pred ceEEEcCcccccccccceEEEEEEEEeCCCCEEEEEecCCCCCCCCeEEEEEECCEEEEEEecCCCCEEEEcCcccCCCC
Confidence 8999987532 1134689999999999999999998642223799999999999999999998888888889999999
Q ss_pred eEEEEEEEeCCEEEEEECCccceeEecCCCcccccCCCCeEEeccCCCCccCCCCCcCCCcee
Q psy5026 230 WRKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQLSLSLSLYLGGVPDYNIVSPKVKIKSSFIG 292 (293)
Q Consensus 230 wh~V~i~r~~~~~~l~VD~~~~~~~~~~~~~~~l~~~~~lyvGG~p~~~~~~~~~~~~~~F~G 292 (293)
||+|.+.|.++.+.|.||+........++....+++...+||||+|....++.......+|.|
T Consensus 98 WH~V~v~r~~~~~~L~VD~~~~~~~~~~~~~~~l~~~~~lyvGG~p~~~~~~~~~~~~~~F~G 160 (189)
T 3pve_A 98 WVRVFLERNGRKGALQVGDGPRVLGESPVPHTMLNLKEPLYVGGAPDFSKLARGAAVASGFDG 160 (189)
T ss_dssp EEEEEEEEETTEEEEEETTSCCEEEECCSSCCCCCCCSCEEESCCSCGGGSCGGGCCCSBCEE
T ss_pred EEEEEEEEeCCEEEEEECCceeEeEEcCCCcceecCCCCEEECCcCchhhcccccccCCCCcE
Confidence 999999999999999999986666667776667888889999999986543333455788987
No 10
>2r16_A Neurexin-1-alpha; beta-sandwich, cell adhesion, splicing; 1.04A {Bos taurus}
Probab=99.90 E-value=2.5e-22 Score=162.18 Aligned_cols=134 Identities=25% Similarity=0.332 Sum_probs=108.9
Q ss_pred ceeEecCCccceeeEEEEEEEEEeCCCCeEEEEeccCCCCCCCeEEEEEeCCEEEEEEECCCceEEEEecCCCCCCCeEE
Q psy5026 153 PDQVYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSNPISLGEWRK 232 (293)
Q Consensus 153 s~~~~~~~~~~~~~~~~i~~~frt~~~~GlLl~~~~~~~~~~~~l~l~l~~g~v~~~~~~g~~~~~~~~~~~~~dg~wh~ 232 (293)
||+.|............|+|+|||.+++|+|||.+.... .+|++|+|.+|++.++++.|++...+.+...+|||+||+
T Consensus 14 sy~~~~~~~~~~~~~~~isl~FrT~~~~GlLl~~~~~~~--~d~l~L~L~~G~l~~~~~~G~~~~~~~~~~~lnDg~WH~ 91 (182)
T 2r16_A 14 MFMKIQLPVVMHTEAEDVSLRFRSQRAYGILMATTSRDS--ADTLRLELDAGRVKLTVNLGKGPETLFAGYNLNDNEWHT 91 (182)
T ss_dssp CCEEEEEEEEEEESEEEEEEEEECSCSSEEEEEEECSSS--CCEEEEEEETTEEEEEEESSSCCEEEEECSSCCSSSCEE
T ss_pred ceEEEECCCcCCccceEEEEEEEECCCCEEEEEeCCCCC--CCEEEEEEECCEEEEEEECCCCceEEEcCcccCCCCeEE
Confidence 787764322233457899999999999999999986433 799999999999999999998888888888999999999
Q ss_pred EEEEEeCCEEEEEECCccceeEecCCCcccccCCCCeEEeccCCCCccCCCCCcCCCcee
Q psy5026 233 LRLTRTGRHAYLQVDRFPSSQILSPGPFTQLSLSLSLYLGGVPDYNIVSPKVKIKSSFIG 292 (293)
Q Consensus 233 V~i~r~~~~~~l~VD~~~~~~~~~~~~~~~l~~~~~lyvGG~p~~~~~~~~~~~~~~F~G 292 (293)
|.+.|.++.+.|.||+........++....+++. .+|+||+|+...+ .....+|.|
T Consensus 92 V~v~r~~~~~~L~VD~~~~~~~~~~g~~~~l~~~-~l~iGG~~~~~~~---~~~~~~F~G 147 (182)
T 2r16_A 92 VRVVRRGKSLKLTVDDQQAMTGQMAGDHTRLEFH-NIETGIITERRYL---SSVPSNFIG 147 (182)
T ss_dssp EEEEEETTEEEEEETTCCEEEEECCSSCCCEEEE-EEEESSCCCCTTC---SSCCCCCEE
T ss_pred EEEEEECCEEEEEECCceeEeEECCCCccEEecc-CeEECCccccccc---CCCCCCCEE
Confidence 9999999999999999876566666666667776 6999999975322 123578887
No 11
>1pz7_A Agrin; structural protein; 1.42A {Gallus gallus} SCOP: b.29.1.4 PDB: 1pz8_A 1pz9_A 1q56_A
Probab=99.90 E-value=3.4e-22 Score=164.46 Aligned_cols=138 Identities=28% Similarity=0.454 Sum_probs=111.1
Q ss_pred ceeEecCCcc--------------ceeeEEEEEEEEEeCCCCeEEEEeccCCCCCCCeEEEEEeCCEEEEEEECCCceEE
Q psy5026 153 PDQVYQGLGE--------------QYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAAT 218 (293)
Q Consensus 153 s~~~~~~~~~--------------~~~~~~~i~~~frt~~~~GlLl~~~~~~~~~~~~l~l~l~~g~v~~~~~~g~~~~~ 218 (293)
||+.|+.... ......+|+|+|||..++|+|||.+... ...+|++|+|.+|+++++++.|++...
T Consensus 21 sy~~~~~~~~~~~~~l~~~~~~~~~~~~~~~is~~frT~~~~GlLl~~g~~~-~~~dfl~l~L~~G~l~~~~~~G~g~~~ 99 (204)
T 1pz7_A 21 TYMEYHNAVTKSPDALDYPAEPSEKALQSNHFELSIKTEATQGLILWSGKGL-ERSDYIALAIVDGFVQMMYDLGSKPVV 99 (204)
T ss_dssp CCEEEECCSCCC-------CCSSCEEESEEEEEEEEEECCSSEEEEEESCCS-TTCCEEEEEEETTEEEEEEESSSCCEE
T ss_pred eeEEEcCcccccccccccccccccccceeEEEEEEEEcCCCCeEEEEeCCCC-CCCCeEEEEEECCEEEEEEECCCCeEE
Confidence 8999875321 1224789999999999999999987521 127999999999999999999988888
Q ss_pred EEecCCCCCCCeEEEEEEEeCCEEEEEECCccceeEecCCCcccccCCCCeEEeccCCCCccCCCC--CcCCCcee
Q psy5026 219 LRSSNPISLGEWRKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQLSLSLSLYLGGVPDYNIVSPKV--KIKSSFIG 292 (293)
Q Consensus 219 ~~~~~~~~dg~wh~V~i~r~~~~~~l~VD~~~~~~~~~~~~~~~l~~~~~lyvGG~p~~~~~~~~~--~~~~~F~G 292 (293)
+++...+|||+||+|.+.|+++.++|.||+........++....+++...+||||+|..... ..+ ....+|+|
T Consensus 100 v~s~~~lnDg~WH~V~v~r~~~~~~L~VD~~~~~~~~~~~~~~~l~~~~~lylGG~p~~~~~-~~~~~~~~~~F~G 174 (204)
T 1pz7_A 100 LRSTVPINTNHWTHIKAYRVQREGSLQVGNEAPITGSSPLGATQLDTDGALWLGGMERLSVA-HKLPKAYSTGFIG 174 (204)
T ss_dssp EEEEEECCSSSCEEEEEEEETTEEEEEETTSCCEEEECCSSCCCEEECCEEEESSCSCCSTT-TTSCGGGGSBCEE
T ss_pred EECCcccCCCCeEEEEEEEeCCEEEEEECCcceEEEECCCCCceEcCCCCEEEecCCCcccc-cccccccCCCceE
Confidence 88888999999999999999999999999987666666666667888889999999985421 111 23578887
No 12
>3sh4_A LG3 peptide; actin disassambly, integrin alpha12 BETA1, metal binding Pro; 1.50A {Homo sapiens} PDB: 3sh5_A
Probab=99.90 E-value=1.7e-22 Score=164.97 Aligned_cols=139 Identities=30% Similarity=0.467 Sum_probs=111.9
Q ss_pred ceeEecCCccce---eeEEEEEEEEEeCCCCeEEEEeccC---CCCCCCeEEEEEeCCEEEEEEECCCceEEEEecCCCC
Q psy5026 153 PDQVYQGLGEQY---LSLLDLTIVFKAIEPNGILLYNGHR---ADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSNPIS 226 (293)
Q Consensus 153 s~~~~~~~~~~~---~~~~~i~~~frt~~~~GlLl~~~~~---~~~~~~~l~l~l~~g~v~~~~~~g~~~~~~~~~~~~~ 226 (293)
||++|+...... .....|+|+|||.+++|+|||.+.. .....+|++|+|.+|++.++++.|++...+++...++
T Consensus 14 syl~lp~~~~~~~~~~~~~~is~~frT~~~~GlLl~~~~~~~~~~~~~d~l~l~L~~G~l~~~~~~G~g~~~~~s~~~l~ 93 (195)
T 3sh4_A 14 GFLAFPGHVFSRSLPEVPETIELEVRTSTASGLLLWQGVEVGEAGQGKDFISLGLQDGHLVFRYQLGSGEARLVSEDPIN 93 (195)
T ss_dssp EEEEECGGGGCCCSTTCCEEEEEEEEECCSSEEEEEECCCTTCTTSTTCEEEEEEETTEEEEEEECSSCEEEEEEEEECC
T ss_pred EEEEEccccccccccccceEEEEEEEeCCCCcEEEEecccccCCCCCCcEEEEEEeCCEEEEEEECCCCcEEEEcCceeC
Confidence 899998653221 2357999999999999999998742 1112789999999999999999998888888888999
Q ss_pred CCCeEEEEEEEeCCEEEEEECCccceeEecCCCcccccCCCCeEEeccCCCCccCCCCCcCCCcee
Q psy5026 227 LGEWRKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQLSLSLSLYLGGVPDYNIVSPKVKIKSSFIG 292 (293)
Q Consensus 227 dg~wh~V~i~r~~~~~~l~VD~~~~~~~~~~~~~~~l~~~~~lyvGG~p~~~~~~~~~~~~~~F~G 292 (293)
||+||+|.+.|+++.++|.||+........++....+++...|||||+|+..... ......+|.|
T Consensus 94 Dg~WH~V~v~r~~~~~~L~VD~~~~~~~~~~~~~~~l~~~~~lyvGG~p~~~~~~-~~~~~~~F~G 158 (195)
T 3sh4_A 94 DGEWHRVTALREGRRGSIQVDGEELVSGRSPGPNVAVNAKGSVYIGGAPDVATLT-GGRFSSGITG 158 (195)
T ss_dssp SSSCEEEEEEEETTEEEEEETTCCCEEEECCSSCCCCCCCSCEEESCCTTHHHHT-TTSCCCCCSE
T ss_pred CCCeEEEEEEEeCCEEEEEECCeeeeeeeCCCCcccccCCCCEEECCCCCccccc-ccccccCCEE
Confidence 9999999999999999999999876666677666668888899999999753322 2234678887
No 13
>3v64_A Low-density lipoprotein receptor-related protein; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} PDB: 3v65_A
Probab=99.89 E-value=3.3e-22 Score=162.75 Aligned_cols=139 Identities=24% Similarity=0.377 Sum_probs=112.1
Q ss_pred ceeEecCCcc-----------ceeeEEEEEEEEEeCCCCeEEEEeccCCCCCCCeEEEEEeCCEEEEEEECCCceEEEEe
Q psy5026 153 PDQVYQGLGE-----------QYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRS 221 (293)
Q Consensus 153 s~~~~~~~~~-----------~~~~~~~i~~~frt~~~~GlLl~~~~~~~~~~~~l~l~l~~g~v~~~~~~g~~~~~~~~ 221 (293)
||+.|..... .......|+|+|||..++|+|||.+... ...+|++|+|.+|++.++++.|++...+++
T Consensus 11 sy~~y~~~~~~~~~~~~~~~~~~~~~~~isl~frT~~~~GlLl~~~~~~-~~~d~l~l~L~~G~l~~~~~~G~~~~~l~s 89 (191)
T 3v64_A 11 TYIEYLNAVIESELTNEIPAEKALQSNHFELSLRTEATQGLVLWIGKAA-ERADYMALAIVDGHLQLSYDLGSQPVVLRS 89 (191)
T ss_dssp CCEEEECSCCCHHHHCCCCCCEEESEEEEEEEEECSCSSEEEEEESCCS-TTCCEEEEEEETTEEEEEEESSSCCEEEEE
T ss_pred eeEEEccccccccccccccccccccceEEEEEEEeCCCCeEEEEeCCCC-CCCcEEEEEEECCEEEEEEECCCccEEEec
Confidence 7888875321 2235789999999999999999997631 127999999999999999999988888888
Q ss_pred cCCCCCCCeEEEEEEEeCCEEEEEECCccceeEecCCCcccccCCCCeEEeccCCCCccCC-CCCcCCCcee
Q psy5026 222 SNPISLGEWRKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQLSLSLSLYLGGVPDYNIVSP-KVKIKSSFIG 292 (293)
Q Consensus 222 ~~~~~dg~wh~V~i~r~~~~~~l~VD~~~~~~~~~~~~~~~l~~~~~lyvGG~p~~~~~~~-~~~~~~~F~G 292 (293)
...++||+||+|.+.|.++.+.|.||+........++....+++...|||||+|....... ......+|.|
T Consensus 90 ~~~v~Dg~WH~V~v~r~~~~~~L~VD~~~~~~~~~~~~~~~l~~~~~lylGG~p~~~~~~~~~~~~~~~F~G 161 (191)
T 3v64_A 90 TVKVNTNRWLRIRAHREHREGSLQVGNEAPVTGSSPLGATQLDTDGALWLGGLQKLPVGQALPKAYGTGFVG 161 (191)
T ss_dssp EEECTTSSCEEEEEEEETTEEEEEETTSCCEEEECCTTCCCEEECSEEEESCCSSCCSSCCSCGGGTSBCEE
T ss_pred CccccCCCCEEEEEEEeCCEEEEEECCeeeEeEECCCCcceeccCCceEEcccCcccccccccccccCCceE
Confidence 8889999999999999999999999998766666777777788889999999998542110 1124578887
No 14
>1d2s_A SHBG, sex hormone-binding globulin; steroid transport, laminin G-like domain, jellyroll, androgen binding protein (ABP); HET: DHT; 1.55A {Homo sapiens} SCOP: b.29.1.4 PDB: 1kdk_A* 1kdm_A*
Probab=99.89 E-value=4.3e-22 Score=159.00 Aligned_cols=130 Identities=14% Similarity=0.244 Sum_probs=103.0
Q ss_pred ceeEecCCccceeeEEEEEEEEEeCCCCeEEEEeccCCCCCCCeEEEEEeCCEEEEEEECCCceEEEEecCCCCCCCeEE
Q psy5026 153 PDQVYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSNPISLGEWRK 232 (293)
Q Consensus 153 s~~~~~~~~~~~~~~~~i~~~frt~~~~GlLl~~~~~~~~~~~~l~l~l~~g~v~~~~~~g~~~~~~~~~~~~~dg~wh~ 232 (293)
+|+.|+.... ..+.|+|+|||.+++|+|||.+.... .+|++|+|.+|++.++++.|.+.+.+.+...+|||+||+
T Consensus 16 ~~l~f~~~~~---~~~~is~~FrT~~~~GlLly~~~~~~--~df~~l~L~~G~l~~~~~~g~~~~~~~s~~~vnDG~WH~ 90 (170)
T 1d2s_A 16 AVMTFDLTKI---TKTSSSFEVRTWDPEGVIFYGDTNPK--DDWFMLGLRDGRPEIQLHNHWAQLTVGAGPRLDDGRWHQ 90 (170)
T ss_dssp EEEEEEGGGC---CCCEEEEEEEESCSSEEEEEEEEETT--TEEEEEEEETTEEEEEEESSSCEEEEECSCCCCSSSCEE
T ss_pred EEEEecCCCC---CceEEEEEEEeCCCCEEEEEecCCCC--CCEEEEEEeCCEEEEEEECCCceEEEeCCCccCCCCCEE
Confidence 6788875432 35699999999999999999976533 689999999999999999998877787788999999999
Q ss_pred EEEEEeCCEEEEEECCccceeEecCCCcccccCCCCeEEeccCCCCccCCCCCcCCCcee
Q psy5026 233 LRLTRTGRHAYLQVDRFPSSQILSPGPFTQLSLSLSLYLGGVPDYNIVSPKVKIKSSFIG 292 (293)
Q Consensus 233 V~i~r~~~~~~l~VD~~~~~~~~~~~~~~~l~~~~~lyvGG~p~~~~~~~~~~~~~~F~G 292 (293)
|.+.|.++.+.|.||+.......... .+.. ..+||||+|..... ...+...+|+|
T Consensus 91 V~v~~~~~~~~L~VD~~~~~~~~~~~---~l~~-~~lylGG~p~~~~~-~~~~~~~~F~G 145 (170)
T 1d2s_A 91 VEVKMEGDSVLLEVDGEEVLRLRQVS---GHPI-MRIALGGLLFPASN-LRLPLVPALDG 145 (170)
T ss_dssp EEEEEETTEEEEEETTEEEEEETTCC---CCCE-EEEEESSCSSCGGG-SSSCCCCCCCE
T ss_pred EEEEEeCCEEEEEECCeeeeeeccCC---Cccc-ccEEEECcccchhh-cccCCCCCeee
Confidence 99999999999999998653322221 1333 58999999975432 12355688887
No 15
>2h0b_A Neurexin-1-alpha; B-sandwich, cell adhesion; 2.10A {Bos taurus}
Probab=99.87 E-value=2.9e-21 Score=156.29 Aligned_cols=135 Identities=24% Similarity=0.422 Sum_probs=107.2
Q ss_pred ceeEecCCccc-eeeEEEEEEEEEeCCCCeEEEEeccCCCCCCCeEEEEEeCCEEEEEEECCCceEE-E--EecCCCCCC
Q psy5026 153 PDQVYQGLGEQ-YLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAAT-L--RSSNPISLG 228 (293)
Q Consensus 153 s~~~~~~~~~~-~~~~~~i~~~frt~~~~GlLl~~~~~~~~~~~~l~l~l~~g~v~~~~~~g~~~~~-~--~~~~~~~dg 228 (293)
+|+.|+..... ......|+|+|||.+++|+|||.+.. .+|++|+|.+|++.++++.|++... + .+...+|||
T Consensus 14 sy~~~~~~~~~~~~~~~~isl~frT~~~~GlLl~~g~~----~d~l~l~L~~G~l~~~~~~G~g~~~~~~~~~~~~l~Dg 89 (184)
T 2h0b_A 14 EYFCYDLSQNPIQSSSDEITLSFKTLQRNGLMLHTGKS----ADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDN 89 (184)
T ss_dssp EEEEEECSSSCEEESEEEEEEEEEESCSCEEEEEECCT----TEEEEEEEETTEEEEEEEESSCEEEEEECCSSSCSSSS
T ss_pred eEEEEccccCccccCccEEEEEEEeCCCCEEEEEeCCC----CCEEEEEEECCEEEEEEECCCCeEEEEEecCCcccCCC
Confidence 89999754322 23468999999999999999998542 6899999999999999999987633 2 356789999
Q ss_pred CeEEEEEEEeCCEEEEEECCccceeEecCCCcccccCCCCeEEeccCCCCccCCCCCcCCCcee
Q psy5026 229 EWRKLRLTRTGRHAYLQVDRFPSSQILSPGPFTQLSLSLSLYLGGVPDYNIVSPKVKIKSSFIG 292 (293)
Q Consensus 229 ~wh~V~i~r~~~~~~l~VD~~~~~~~~~~~~~~~l~~~~~lyvGG~p~~~~~~~~~~~~~~F~G 292 (293)
+||+|.+.|.++.+.|.||+........++....++....+||||+|.....+ ......+|.|
T Consensus 90 ~WH~V~v~r~~~~~~L~VD~~~~~~~~~~~~~~~l~~~~~l~lGG~p~~~~~~-~~~~~~~F~G 152 (184)
T 2h0b_A 90 AWHDVKVTRNLRQVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLP-GSPVSNNFMG 152 (184)
T ss_dssp SCEEEEEEEETTEEEEEETTTEEEEEECSTTCCCEEECSEEEESCCTTGGGST-TCSCCCBCEE
T ss_pred CeEEEEEEEeCCEEEEEEcCceeeeeECCCCceeccCCCCEEECCCCccccCc-CCcccCCCEE
Confidence 99999999999999999999865555555555556777889999999864433 3445678987
No 16
>2jd4_A Laminin subunit alpha-1; basement membrane protein, metal binding protein; 1.9A {Mus musculus}
Probab=99.87 E-value=6e-21 Score=171.79 Aligned_cols=138 Identities=24% Similarity=0.410 Sum_probs=112.4
Q ss_pred ceeEecCCccceeeEEEEEEEEEeCCCCeEEEEeccCCCCCCCeEEEEEeCCEEEEEEECCCceEEEEecCCCCCCCeEE
Q psy5026 153 PDQVYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSNPISLGEWRK 232 (293)
Q Consensus 153 s~~~~~~~~~~~~~~~~i~~~frt~~~~GlLl~~~~~~~~~~~~l~l~l~~g~v~~~~~~g~~~~~~~~~~~~~dg~wh~ 232 (293)
||+.|+.........+.|+|.|||.+++|+|||.+.... .+|++|+|.+|+++++++.|++...++++..++||+||+
T Consensus 30 S~~~~~~~~~~~~~~~~is~~frT~~~~GlLly~~~~~~--~d~~~l~L~~G~l~~~~~~g~~~~~~~~~~~~~Dg~WH~ 107 (383)
T 2jd4_A 30 SHLVLPLQQSDVRKRLQVQLSIRTFASSGLIYYVAHQNQ--MDYATLQLQEGRLHFMFDLGKGRTKVSHPALLSDGKWHT 107 (383)
T ss_dssp CEEEEECCSCCCSSEEEEEEEEEECCSCEEEEEEECTTS--SSEEEEEEETTEEEEEEECSSCEEEEECCCCCTTSSCEE
T ss_pred eeEEEeCCchhcccceEEEEEEEcCCCCeEEEEeCCCCC--CcEEEEEEECCEEEEEEECCCCeEEEeCcceecCCCcEE
Confidence 899997533333457899999999999999999976533 799999999999999999999888888888999999999
Q ss_pred EEEEEeCCEEEEEECCccceeEecCCCcccccCCCCeEEeccCCCCccCCCCCcCCCcee
Q psy5026 233 LRLTRTGRHAYLQVDRFPSSQILSPGPFTQLSLSLSLYLGGVPDYNIVSPKVKIKSSFIG 292 (293)
Q Consensus 233 V~i~r~~~~~~l~VD~~~~~~~~~~~~~~~l~~~~~lyvGG~p~~~~~~~~~~~~~~F~G 292 (293)
|.+.|.++.+.|.||+........++....+++...+||||+|.............+|+|
T Consensus 108 V~v~r~~~~~~L~VD~~~~~~~~~~g~~~~l~~~~~l~vGG~p~~~~~~~~~~~~~~F~G 167 (383)
T 2jd4_A 108 VKTEYIKRKAFMTVDGQESPSVTVVGKATTLDVERKLYLGGLPSHYRARNIGTITHSIPA 167 (383)
T ss_dssp EEEEEETTEEEEEETTEECCCEECCSSCCCCCCCSEEEESSCCTTCCCCSSCSCCSBCCE
T ss_pred EEEEEeCCEEEEEEcCccccceecCCCcceecCCCCeEEeccCcccccccccccCCCceE
Confidence 999999999999999986655555555666788889999999975322212234578887
No 17
>1f5f_A SHBG, sex hormone-binding globulin; jellyroll, signaling protein; HET: DHT; 1.70A {Homo sapiens} SCOP: b.29.1.4 PDB: 1lhw_A* 1lho_A* 1lhn_A* 1lhv_A* 1lhu_A*
Probab=99.87 E-value=3.3e-21 Score=158.60 Aligned_cols=133 Identities=14% Similarity=0.247 Sum_probs=101.5
Q ss_pred ceeEecCCccceeeEEEEEEEEEeCCCCeEEEEeccCCCCCCCeEEEEEeCCEEEEEEECCCceEEEEecCCCCCCCeEE
Q psy5026 153 PDQVYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSNPISLGEWRK 232 (293)
Q Consensus 153 s~~~~~~~~~~~~~~~~i~~~frt~~~~GlLl~~~~~~~~~~~~l~l~l~~g~v~~~~~~g~~~~~~~~~~~~~dg~wh~ 232 (293)
+|+.|+.... ...+|+|+|||.+++|+|||.+.... .+|++|+|.+|++.++++.|.+.+.+.+...+|||+||+
T Consensus 28 ~y~~~~~~~~---~~~~is~~frT~~~~GlLly~~~~~~--~d~~~l~L~~G~l~~~~~~g~~~~~~~s~~~vnDG~WH~ 102 (205)
T 1f5f_A 28 AVMTFDLTKI---TKTSSSFEVRTWDPEGVIFYGDTNPK--DDWFMLGLRDGRPEIQLHNHWAQLTVGAGPRLDDGRWHQ 102 (205)
T ss_dssp EEEEEEGGGC---CCCEEEEEEEESCSSEEEEEEEEETT--TEEEEEEEETTEEEEEEESSSCEEEEECSCCCCSSSCEE
T ss_pred EEEEECCCCC---CceEEEEEEEeCCCCEEEEEeCCCCC--CCEEEEEEECCEEEEEEECCCceEEEecCCccCCCCCEE
Confidence 5677764322 34799999999999999999976543 689999999999999999998887887888999999999
Q ss_pred EEEEEeCCEEEEEECCccceeEe-c--CCCcccccCCCCeEEeccCCCCccCCCCCcCCCcee
Q psy5026 233 LRLTRTGRHAYLQVDRFPSSQIL-S--PGPFTQLSLSLSLYLGGVPDYNIVSPKVKIKSSFIG 292 (293)
Q Consensus 233 V~i~r~~~~~~l~VD~~~~~~~~-~--~~~~~~l~~~~~lyvGG~p~~~~~~~~~~~~~~F~G 292 (293)
|.+.|.++.+.|.||+....... . +.....+.. ..|||||+|..... ...+...+|+|
T Consensus 103 V~v~r~~~~~~L~VD~~~~~~~~~~~~~~~~~~~~~-~~lyiGG~p~~~~~-~~~~~~~~F~G 163 (205)
T 1f5f_A 103 VEVKMEGDSVLLEVDGEEVLRLRQVSGPLTSKRHPI-MRIALGGLLFPASN-LRLPLVPALDG 163 (205)
T ss_dssp EEEEEETTEEEEEETTEEEEEECSCCCCC----CCE-EEEEESSCSSCGGG-SSSCCCCCCCE
T ss_pred EEEEEeCCEEEEEECCeeeeeeeccCCCcccccCCC-ceEEEeCccCcccc-ccccCCCCeeE
Confidence 99999999999999998654332 1 111112222 68999999975422 13456688887
No 18
>3bod_A Neurexin-1-alpha; neurexin1D, LNS6, alternative splicing, calcium, cell adhesion, EGF-like domain, glycoprotein, membrane, metal- binding; 1.70A {Mus musculus} PDB: 2vh8_C 2xb6_C* 2wqz_C* 1c4r_A 3bop_A 3mw4_A*
Probab=99.87 E-value=8e-21 Score=152.80 Aligned_cols=123 Identities=24% Similarity=0.416 Sum_probs=96.6
Q ss_pred ceeEecCCc--cceeeEEEEEEEEEeCCCCeEEEEeccCCCCCCCeEEEEEeCCEEEEEEECCCceEEEE-ecCCCCCCC
Q psy5026 153 PDQVYQGLG--EQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLR-SSNPISLGE 229 (293)
Q Consensus 153 s~~~~~~~~--~~~~~~~~i~~~frt~~~~GlLl~~~~~~~~~~~~l~l~l~~g~v~~~~~~g~~~~~~~-~~~~~~dg~ 229 (293)
||+.|.... ........|+|+|||.+++|+|||..... ...+|++|+|.+|++.++++.|++...+. +...+|||+
T Consensus 14 s~l~y~~~~~~~~~~~~~~isl~FrT~~~~GlLl~~~~~~-~~~dfi~l~L~~G~l~~~~~~G~~~~~~~~~~~~vnDg~ 92 (178)
T 3bod_A 14 GQITYKWPPNDRPSTRADRLAIGFSTVQKEAVLVRVDSSS-GLGDYLELHIHQGKIGVKFNVGTDDIAIEESNAIINDGK 92 (178)
T ss_dssp EEEEEECCTTSCCCBSEEEEEEEEECCCSSEEEEEEEESS-SSCCEEEEEEETTEEEEEEESSSCCEEEECCSSCCCSSS
T ss_pred cEEEEECCCcCCCCccccEEEEEEEECCCCEEEEEEcCCC-CCCCEEEEEEECCEEEEEEECCCCceEEecCCcCccCCC
Confidence 677775332 12234679999999999999999964221 12799999999999999999998876666 567899999
Q ss_pred eEEEEEEEeCCEEEEEECCccceeEecCCCc-ccccCCCCeEEeccCC
Q psy5026 230 WRKLRLTRTGRHAYLQVDRFPSSQILSPGPF-TQLSLSLSLYLGGVPD 276 (293)
Q Consensus 230 wh~V~i~r~~~~~~l~VD~~~~~~~~~~~~~-~~l~~~~~lyvGG~p~ 276 (293)
||+|.+.|.++.+.|+||+........++.. ..++....+||||+|.
T Consensus 93 WH~V~v~r~~~~~~L~VD~~~~~~~~~~~~~~~~l~~~~~lylGG~p~ 140 (178)
T 3bod_A 93 YHVVRFTRSGGNATLQVDSWPVIERYPAGRQLTIFNSQATIIIGGKEQ 140 (178)
T ss_dssp CEEEEEEEETTEEEEEETTSCCEEECCCSCCCCCBCCEEEEEESCCTT
T ss_pred eEEEEEEEeCCEEEEEEeCCceeeeecCCCcceEEeCCCcEEEecccC
Confidence 9999999999999999999865444333332 3477777899999986
No 19
>1dyk_A Laminin alpha 2 chain; metal binding protein; 2.0A {Mus musculus} SCOP: b.29.1.4 b.29.1.4 PDB: 1okq_A 1qu0_A
Probab=99.86 E-value=1.8e-20 Score=169.34 Aligned_cols=137 Identities=23% Similarity=0.369 Sum_probs=109.9
Q ss_pred ceeEecCCccceeeEEEEEEEEEeCCCCeEEEEeccCCCCCCCeEEEEEeCCEEEEEEECCCceEEEEecCCCCCCCeEE
Q psy5026 153 PDQVYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSNPISLGEWRK 232 (293)
Q Consensus 153 s~~~~~~~~~~~~~~~~i~~~frt~~~~GlLl~~~~~~~~~~~~l~l~l~~g~v~~~~~~g~~~~~~~~~~~~~dg~wh~ 232 (293)
||+.++.........++|+|+|||..++|+|||.+.... .+|++|+|.+|++.++++.|++...+++...++||+||+
T Consensus 44 s~~~~~~~~~~~~~~~~is~~frT~~~~GlLly~~~~~~--~dfi~l~L~~G~l~~~~~~g~g~~~~~~~~~~~Dg~WH~ 121 (394)
T 1dyk_A 44 SHIAIAFDDTKVKNRLTIELEVRTEAESGLLFYMARINH--ADFATVQLRNGFPYFSYDLGSGDTSTMIPTKINDGQWHK 121 (394)
T ss_dssp CEEEEECCGGGGSSEEEEEEEEEECCSCEEEEEEECTTS--SSEEEEEEETTEEEEEEESSSCEEEEECCSCCCSSSCEE
T ss_pred cEEEEEcCccccccceEEEEEEEeCCCCeEEEEcCCCCC--CceEEEEEECCEEEEEEECCCCceEEEcccccCCCCEEE
Confidence 787776433333457899999999999999999876433 799999999999999999999888888888999999999
Q ss_pred EEEEEeCCEEEEEECCccceeEecCCCcccccCCCCeEEeccCCCCccCCCCCcCCCcee
Q psy5026 233 LRLTRTGRHAYLQVDRFPSSQILSPGPFTQLSLSLSLYLGGVPDYNIVSPKVKIKSSFIG 292 (293)
Q Consensus 233 V~i~r~~~~~~l~VD~~~~~~~~~~~~~~~l~~~~~lyvGG~p~~~~~~~~~~~~~~F~G 292 (293)
|.+.|.++.+.|.||+....... ++....+++...+||||+|.............+|+|
T Consensus 122 V~v~r~~~~~~L~VD~~~~~~~~-~g~~~~l~~~~~l~vGG~p~~~~~~~~~~~~~~F~G 180 (394)
T 1dyk_A 122 IKIVRVKQEGILYVDDASSQTIS-PKKADILDVVGILYVGGLPINYTTRRIGPVTYSLDG 180 (394)
T ss_dssp EEEEEETTEEEEEETTEEEEEEC-STTCCCCCCCSEEEESSCCTTCCCCSSCSCCSBCSE
T ss_pred EEEEEeCCEEEEEEcCcccceec-CCCCceecCCCCEEEcccCCcccccccccCCCCccE
Confidence 99999999999999998654433 555566788889999999975432222234567887
No 20
>2r1b_A Neurexin-1-beta, neurexin I-beta; beta-sandwich, cell adhesion, splicing; 1.72A {Rattus norvegicus} PDB: 3mw2_A* 3b3q_E* 3mw3_A*
Probab=99.85 E-value=2.3e-20 Score=155.01 Aligned_cols=100 Identities=25% Similarity=0.442 Sum_probs=81.0
Q ss_pred ceeEecCCc--cceeeEEEEEEEEEeCCCCeEEEEeccCCCCCCCeEEEEEeCCEEEEEEECCCceEEEEec-CCCCCCC
Q psy5026 153 PDQVYQGLG--EQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSS-NPISLGE 229 (293)
Q Consensus 153 s~~~~~~~~--~~~~~~~~i~~~frt~~~~GlLl~~~~~~~~~~~~l~l~l~~g~v~~~~~~g~~~~~~~~~-~~~~dg~ 229 (293)
||+.|...+ ........|+|+|||.+++|+|||..... ...||++|+|.+|++.++++.|++...+... ..++||+
T Consensus 20 s~l~y~~~~~~~~~~~~~~isl~FrT~~~~GlLly~~~~~-~~~dfi~LeL~~G~l~~~~~~G~~~~~~~~~~~~vnDG~ 98 (220)
T 2r1b_A 20 GQITYKWPPNDRPSTRADRLAIGFSTVQKEAVLVRVDSSS-GLGDYLELHIHQGKIGVKFNVGTDDIAIEESNAIINDGK 98 (220)
T ss_dssp EEEEEECCGGGCCCBSEEEEEEEEECCCSSEEEEEEEEST-TCCCEEEEEEETTEEEEEEESSSSCEEEECTTCCCCSSS
T ss_pred eEEEEECCCCCcccccCcEEEEEEEeCCCCEEEEEecCCC-CCCCeEEEEEECCEEEEEEECCCCceEEEeCceEecCCc
Confidence 677775332 12223568999999999999999965432 1279999999999999999999988777764 6799999
Q ss_pred eEEEEEEEeCCEEEEEECCcccee
Q psy5026 230 WRKLRLTRTGRHAYLQVDRFPSSQ 253 (293)
Q Consensus 230 wh~V~i~r~~~~~~l~VD~~~~~~ 253 (293)
||+|.+.|.++.+.|+||+.....
T Consensus 99 WH~V~v~r~~~~~~L~VD~~~~~~ 122 (220)
T 2r1b_A 99 YHVVRFTRSGGNATLQVDSWPVIE 122 (220)
T ss_dssp CEEEEEEEETTEEEEEETTSCCEE
T ss_pred eEEEEEEEeCCEEEEEECCcceee
Confidence 999999999999999999986543
No 21
>3v64_A Low-density lipoprotein receptor-related protein; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} PDB: 3v65_A
Probab=99.85 E-value=2.5e-20 Score=151.63 Aligned_cols=122 Identities=19% Similarity=0.305 Sum_probs=96.2
Q ss_pred CceeEEEEEEEeCCCCeEEEEeccCCCCCCCeEEEEEECCEEEEEEeCC---------------CCCCeEEEEeccEEEe
Q psy5026 5 PQAWRFPIQFKPESWDGILFLTGERDDLNGDFMTLLIFEGYVEFSTPYR---------------PYADITVHRTVRTLIL 69 (293)
Q Consensus 5 ~~~~~i~~~FrT~~~~GlL~~~~~~~~~~~~~~~l~l~~G~l~~~~~~g---------------~w~~~~~~~~~~~v~l 69 (293)
+...+|+|+|||.+++|+|||.++.. ...||++|+|.+|+|++.++.| +||.+.+.+..+.+.|
T Consensus 34 ~~~~~isl~frT~~~~GlLl~~~~~~-~~~d~l~l~L~~G~l~~~~~~G~~~~~l~s~~~v~Dg~WH~V~v~r~~~~~~L 112 (191)
T 3v64_A 34 LQSNHFELSLRTEATQGLVLWIGKAA-ERADYMALAIVDGHLQLSYDLGSQPVVLRSTVKVNTNRWLRIRAHREHREGSL 112 (191)
T ss_dssp ESEEEEEEEEECSCSSEEEEEESCCS-TTCCEEEEEEETTEEEEEEESSSCCEEEEEEEECTTSSCEEEEEEEETTEEEE
T ss_pred ccceEEEEEEEeCCCCeEEEEeCCCC-CCCcEEEEEEECCEEEEEEECCCccEEEecCccccCCCCEEEEEEEeCCEEEE
Confidence 56789999999999999999998631 2469999999999999987765 6999999998887777
Q ss_pred cccCC-------CCceeeeecCCceEEcCCCCCCCCCC-CCCcccCceeeEEEEEEcCeeeeeccC
Q psy5026 70 PYTVP-------SGLFSRITFREPVFVGGRGNTSGLSD-KLPTEKGFKGCIRHLDINDHLYNFNVS 127 (293)
Q Consensus 70 ~~~g~-------~~~~~~l~~~~~l~iGG~p~~~~~~~-~~~~~~~F~GCi~~~~~n~~~~~~~~~ 127 (293)
..++. ++....++...++||||+|....... ......+|.|||+++.+|++.+++...
T Consensus 113 ~VD~~~~~~~~~~~~~~~l~~~~~lylGG~p~~~~~~~~~~~~~~~F~GCi~~l~in~~~l~l~~~ 178 (191)
T 3v64_A 113 QVGNEAPVTGSSPLGATQLDTDGALWLGGLQKLPVGQALPKAYGTGFVGCLRDVVVGHRQLHLLED 178 (191)
T ss_dssp EETTSCCEEEECCTTCCCEEECSEEEESCCSSCCSSCCSCGGGTSBCEEEEEEEEETTEECCTTTT
T ss_pred EECCeeeEeEECCCCcceeccCCceEEcccCcccccccccccccCCceEEeeEEEECCEEccchhH
Confidence 55542 24455678888999999987532211 012357899999999999999988763
No 22
>1pz7_A Agrin; structural protein; 1.42A {Gallus gallus} SCOP: b.29.1.4 PDB: 1pz8_A 1pz9_A 1q56_A
Probab=99.84 E-value=4.9e-20 Score=151.50 Aligned_cols=120 Identities=23% Similarity=0.366 Sum_probs=94.7
Q ss_pred CceeEEEEEEEeCCCCeEEEEeccCCCCCCCeEEEEEECCEEEEEEeCC---------------CCCCeEEEEeccEEEe
Q psy5026 5 PQAWRFPIQFKPESWDGILFLTGERDDLNGDFMTLLIFEGYVEFSTPYR---------------PYADITVHRTVRTLIL 69 (293)
Q Consensus 5 ~~~~~i~~~FrT~~~~GlL~~~~~~~~~~~~~~~l~l~~G~l~~~~~~g---------------~w~~~~~~~~~~~v~l 69 (293)
+..++|+|+|||.+++|+|||.++. ....||++|+|.+|+|++.++.| +||.+.+.+..+.+.|
T Consensus 47 ~~~~~is~~frT~~~~GlLl~~g~~-~~~~dfl~l~L~~G~l~~~~~~G~g~~~v~s~~~lnDg~WH~V~v~r~~~~~~L 125 (204)
T 1pz7_A 47 LQSNHFELSIKTEATQGLILWSGKG-LERSDYIALAIVDGFVQMMYDLGSKPVVLRSTVPINTNHWTHIKAYRVQREGSL 125 (204)
T ss_dssp ESEEEEEEEEEECCSSEEEEEESCC-STTCCEEEEEEETTEEEEEEESSSCCEEEEEEEECCSSSCEEEEEEEETTEEEE
T ss_pred ceeEEEEEEEEcCCCCeEEEEeCCC-CCCCCeEEEEEECCEEEEEEECCCCeEEEECCcccCCCCeEEEEEEEeCCEEEE
Confidence 3578999999999999999999753 12469999999999999987765 7999999988887777
Q ss_pred cccCC-------CCceeeeecCCceEEcCCCCCCCCCCCCC--cccCceeeEEEEEEcCeeeeecc
Q psy5026 70 PYTVP-------SGLFSRITFREPVFVGGRGNTSGLSDKLP--TEKGFKGCIRHLDINDHLYNFNV 126 (293)
Q Consensus 70 ~~~g~-------~~~~~~l~~~~~l~iGG~p~~~~~~~~~~--~~~~F~GCi~~~~~n~~~~~~~~ 126 (293)
..++. ++....++....+||||+|...... ..+ ...+|.|||++|.+|++.+++..
T Consensus 126 ~VD~~~~~~~~~~~~~~~l~~~~~lylGG~p~~~~~~-~~~~~~~~~F~GCi~~l~in~~~~dl~~ 190 (204)
T 1pz7_A 126 QVGNEAPITGSSPLGATQLDTDGALWLGGMERLSVAH-KLPKAYSTGFIGCIRDVIVDRQELHLVE 190 (204)
T ss_dssp EETTSCCEEEECCSSCCCEEECCEEEESSCSCCSTTT-TSCGGGGSBCEEEEEEEEETTEECCTTT
T ss_pred EECCcceEEEECCCCCceEcCCCCEEEecCCCccccc-ccccccCCCceEEEEEEEECCEEccchh
Confidence 54442 2344567888899999999754321 122 35789999999999999998865
No 23
>3pve_A Agrin, AGRN protein; mRNA splicing, structural genomics, PSI-2, protein structure initiative; 1.40A {Mus musculus}
Probab=99.84 E-value=2.9e-20 Score=151.05 Aligned_cols=121 Identities=21% Similarity=0.382 Sum_probs=93.8
Q ss_pred CceeEEEEEEEeCCCCeEEEEeccCCCCCCCeEEEEEECCEEEEEEeCC---------------CCCCeEEEEeccEEEe
Q psy5026 5 PQAWRFPIQFKPESWDGILFLTGERDDLNGDFMTLLIFEGYVEFSTPYR---------------PYADITVHRTVRTLIL 69 (293)
Q Consensus 5 ~~~~~i~~~FrT~~~~GlL~~~~~~~~~~~~~~~l~l~~G~l~~~~~~g---------------~w~~~~~~~~~~~v~l 69 (293)
...++|+|+|||.+++|+|||.++..+...||++|+|.+|++++.++.| +||.+.+.+..+.+.|
T Consensus 33 ~~~~~isl~frT~~~~GlLl~~~~~~~~~~d~l~l~L~~G~l~~~~~~G~g~~~l~s~~~l~Dg~WH~V~v~r~~~~~~L 112 (189)
T 3pve_A 33 GEKMALEMVFLARGPSGLLLYNGQKTDGKGDFVSLALHNRHLEFRYDLGKGAAIIRSKEPIALGTWVRVFLERNGRKGAL 112 (189)
T ss_dssp ---CEEEEEEEESSSCEEEEEEESCC-CCSCEEEEEEETTEEEEEEESSSCEEEEECSSCCCTTSEEEEEEEEETTEEEE
T ss_pred cceEEEEEEEEeCCCCEEEEEecCCCCCCCCeEEEEEECCEEEEEEecCCCCEEEEcCcccCCCCEEEEEEEEeCCEEEE
Confidence 4578999999999999999999974223479999999999999988765 6999999988887777
Q ss_pred cccCC-------CCceeeeecCCceEEcCCCCCCCCCCCCCcccCceeeEEEEEEcCeeeeec
Q psy5026 70 PYTVP-------SGLFSRITFREPVFVGGRGNTSGLSDKLPTEKGFKGCIRHLDINDHLYNFN 125 (293)
Q Consensus 70 ~~~g~-------~~~~~~l~~~~~l~iGG~p~~~~~~~~~~~~~~F~GCi~~~~~n~~~~~~~ 125 (293)
..++. ++....+++..++||||+|.............+|.|||+++.+|++.+++.
T Consensus 113 ~VD~~~~~~~~~~~~~~~l~~~~~lyvGG~p~~~~~~~~~~~~~~F~GCi~~v~ing~~l~~~ 175 (189)
T 3pve_A 113 QVGDGPRVLGESPVPHTMLNLKEPLYVGGAPDFSKLARGAAVASGFDGAIQLVSLRGHQLLTQ 175 (189)
T ss_dssp EETTSCCEEEECCSSCCCCCCCSCEEESCCSCGGGSCGGGCCCSBCEEEEEEEEETTEECCBG
T ss_pred EECCceeEeEEcCCCcceecCCCCEEECCcCchhhcccccccCCCCcEEceEEEECCEEccCh
Confidence 55442 234456778889999999875433222344689999999999999988554
No 24
>2r1d_A Neurexin-1-beta, neurexin I-beta; beta-sandwich, cell adhesion, splicing; 2.60A {Rattus norvegicus} SCOP: b.29.1.4 PDB: 3biw_E*
Probab=99.84 E-value=8e-20 Score=152.13 Aligned_cols=123 Identities=22% Similarity=0.396 Sum_probs=97.0
Q ss_pred ceeEecCCcc--ceeeEEEEEEEEEeCCCCeEEEEeccCCCCCCCeEEEEEeCCEEEEEEECCCceEEEEe-cCCCCCCC
Q psy5026 153 PDQVYQGLGE--QYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRS-SNPISLGE 229 (293)
Q Consensus 153 s~~~~~~~~~--~~~~~~~i~~~frt~~~~GlLl~~~~~~~~~~~~l~l~l~~g~v~~~~~~g~~~~~~~~-~~~~~dg~ 229 (293)
||+.|..... .......|+|+|||.+++|+|||..... ...||++|+|.+|++.++++.|++...+.. ...++||+
T Consensus 48 s~i~y~~~~~~~~~~~~~~isl~FrT~~~~GlLl~~~~~~-~~~dfi~L~L~~G~l~~~~~~G~~~~~~~~~~~~vnDG~ 126 (226)
T 2r1d_A 48 GQITYKWPPNDRPSTRADRLAIGFSTVQKEAVLVRVDSSS-GLGDYLELHIHQGKIGVKFNVGTDDIAIEESNAIINDGK 126 (226)
T ss_dssp EEEEEECCGGGCCCBSEEEEEEEEECCCSSEEEEEEEECT-TCCCEEEEEEETTEEEEEEESSSCEEEEECCSSCCCSSS
T ss_pred cEEEEECCccccccccccEEEEEEEeCCCCEEEEEecCCC-CCCCEEEEEEECCEEEEEEECCCCcEEEEeCCeEecCCC
Confidence 7877764321 1224568999999999999999975431 127999999999999999999998877775 46899999
Q ss_pred eEEEEEEEeCCEEEEEECCccceeE-ecCCCcccccCCCCeEEeccCC
Q psy5026 230 WRKLRLTRTGRHAYLQVDRFPSSQI-LSPGPFTQLSLSLSLYLGGVPD 276 (293)
Q Consensus 230 wh~V~i~r~~~~~~l~VD~~~~~~~-~~~~~~~~l~~~~~lyvGG~p~ 276 (293)
||+|.+.|.++.+.|+||+...... ..++....+++...|||||+|.
T Consensus 127 WH~V~v~r~~~~~~L~VD~~~~~~~~~~~~~~~~l~~~~~lylGG~p~ 174 (226)
T 2r1d_A 127 YHVVRFTRSGGNATLQVDSWPVIERYPAGRQLTIFNSQATIIIGGKEQ 174 (226)
T ss_dssp CEEEEEEEETTEEEEEETTSCCEEECCSSCCCCCBCSEEEEEESSTTT
T ss_pred CEEEEEEEeCCEEEEEEcCccceEEecCCCcceeccCCCeEEEccccC
Confidence 9999999999999999999854332 2334445577778899999985
No 25
>3sh4_A LG3 peptide; actin disassambly, integrin alpha12 BETA1, metal binding Pro; 1.50A {Homo sapiens} PDB: 3sh5_A
Probab=99.84 E-value=3.9e-20 Score=151.00 Aligned_cols=132 Identities=16% Similarity=0.293 Sum_probs=98.2
Q ss_pred ceeEEEEEEEeCCCCeEEEEeccC---CCCCCCeEEEEEECCEEEEEEeCC---------------CCCCeEEEEeccEE
Q psy5026 6 QAWRFPIQFKPESWDGILFLTGER---DDLNGDFMTLLIFEGYVEFSTPYR---------------PYADITVHRTVRTL 67 (293)
Q Consensus 6 ~~~~i~~~FrT~~~~GlL~~~~~~---~~~~~~~~~l~l~~G~l~~~~~~g---------------~w~~~~~~~~~~~v 67 (293)
...+|+|+|||.+++|+|||.+.. .....||++|+|.+|+|++.++.| +||.+.+.+..+.+
T Consensus 30 ~~~~is~~frT~~~~GlLl~~~~~~~~~~~~~d~l~l~L~~G~l~~~~~~G~g~~~~~s~~~l~Dg~WH~V~v~r~~~~~ 109 (195)
T 3sh4_A 30 VPETIELEVRTSTASGLLLWQGVEVGEAGQGKDFISLGLQDGHLVFRYQLGSGEARLVSEDPINDGEWHRVTALREGRRG 109 (195)
T ss_dssp CCEEEEEEEEECCSSEEEEEECCCTTCTTSTTCEEEEEEETTEEEEEEECSSCEEEEEEEEECCSSSCEEEEEEEETTEE
T ss_pred cceEEEEEEEeCCCCcEEEEecccccCCCCCCcEEEEEEeCCEEEEEEECCCCcEEEEcCceeCCCCeEEEEEEEeCCEE
Confidence 357999999999999999999752 122469999999999999987765 79999999988888
Q ss_pred EecccCC-------CCceeeeecCCceEEcCCCCCCCCCCCCCcccCceeeEEEEEEcC--------eeeeeccCCCCCc
Q psy5026 68 ILPYTVP-------SGLFSRITFREPVFVGGRGNTSGLSDKLPTEKGFKGCIRHLDIND--------HLYNFNVSPGGDS 132 (293)
Q Consensus 68 ~l~~~g~-------~~~~~~l~~~~~l~iGG~p~~~~~~~~~~~~~~F~GCi~~~~~n~--------~~~~~~~~~~~~~ 132 (293)
.|..++. ++....++...+|||||+|...... ......+|.|||++|.+|+ +.+||... +
T Consensus 110 ~L~VD~~~~~~~~~~~~~~~l~~~~~lyvGG~p~~~~~~-~~~~~~~F~GCi~~l~in~~~~~~~~~~~ldl~~~----a 184 (195)
T 3sh4_A 110 SIQVDGEELVSGRSPGPNVAVNAKGSVYIGGAPDVATLT-GGRFSSGITGCVKNLVLHSARPGAPPPQPLDLQHR----A 184 (195)
T ss_dssp EEEETTCCCEEEECCSSCCCCCCCSCEEESCCTTHHHHT-TTSCCCCCSEEEEEEEEEECCTTCCCCCCCCTTTS----C
T ss_pred EEEECCeeeeeeeCCCCcccccCCCCEEECCCCCccccc-ccccccCCEEEEEEEEECCcCCCCCCceeecchhh----h
Confidence 7765543 2344557788899999998642211 1223579999999999984 55666542 3
Q ss_pred cccccccccc
Q psy5026 133 LKGIDVALLR 142 (293)
Q Consensus 133 ~~~~~~~~C~ 142 (293)
..+.++..|+
T Consensus 185 ~~~~nv~~C~ 194 (195)
T 3sh4_A 185 QAGANTRPCP 194 (195)
T ss_dssp SEEEEEEECC
T ss_pred ccCCccCCCC
Confidence 4566776563
No 26
>1h30_A GAS6, growth-arrest-specific protein; laminin G-domain protein, vitamin K-dependent protein, AXL/SKY/MER ligand, laminin G- like domain; 2.2A {Homo sapiens} SCOP: b.29.1.4 b.29.1.4 PDB: 2c5d_A*
Probab=99.82 E-value=1e-19 Score=165.69 Aligned_cols=136 Identities=22% Similarity=0.324 Sum_probs=107.4
Q ss_pred ceeEecCCccceeeEEEEEEEEEeCCCCeEEEEeccCCCCCCCeEEEEEeCCEEEEEEECCCceEEEEecCCCCCCCeEE
Q psy5026 153 PDQVYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSSNPISLGEWRK 232 (293)
Q Consensus 153 s~~~~~~~~~~~~~~~~i~~~frt~~~~GlLl~~~~~~~~~~~~l~l~l~~g~v~~~~~~g~~~~~~~~~~~~~dg~wh~ 232 (293)
+|+.+..... ....+.|+|+|||.+++|+|||.+.... .+|++|+|.+|++.++++.|++...+.+...++||+||+
T Consensus 49 ~~~~~~f~~~-~~~~~~is~~FrT~~~~GlLly~~~~~~--~df~~l~L~~G~l~~~~~~g~~~~~~~~~~~~nDg~WH~ 125 (422)
T 1h30_A 49 PVIRLRFKRL-QPTRLVAEFDFRTFDPEGILLFAGGHQD--STWIVLALRAGRLELQLRYNGVGRVTSSGPVINHGMWQT 125 (422)
T ss_dssp CCEEEECCBS-SCCCCEEEEEEEECCSSEEEEEEESCTT--SEEEEEEEETTEEEEEEEETTEEEEEEEEEECCSSCCEE
T ss_pred ceEEEEccCC-CCCceEEEEEEEeCCCCeEEEEECCCCC--CcEEEEEEECCEEEEEEECCCCcEEEecCceecCCCCEE
Confidence 4555532111 1356799999999999999999987543 799999999999999999998777777788999999999
Q ss_pred EEEEEeCCEEEEEECCccceeEecCCCccccc---CCCCeEEeccCCCCccCCCCCcCCCcee
Q psy5026 233 LRLTRTGRHAYLQVDRFPSSQILSPGPFTQLS---LSLSLYLGGVPDYNIVSPKVKIKSSFIG 292 (293)
Q Consensus 233 V~i~r~~~~~~l~VD~~~~~~~~~~~~~~~l~---~~~~lyvGG~p~~~~~~~~~~~~~~F~G 292 (293)
|++.|.++.+.|.||+........++....++ +...+||||+|.... ....+...+|+|
T Consensus 126 V~v~r~~~~~~L~VD~~~~~~~~~~g~~~~l~~~~~~~~lyvGG~p~~~~-~~~~~~~~~F~G 187 (422)
T 1h30_A 126 ISVEELARNLVIKVNRDAVMKIAVAGDLFQPERGLYHLNLTVGGIPFHEK-DLVQPINPRLDG 187 (422)
T ss_dssp EEEEECSSEEEEEETTEEEEEEECCSCSSEEETTEEECEEEESSCSSCGG-GSSSCCCCCCCE
T ss_pred EEEEEcCCEEEEEECCeeeEEeecCCcccccccccccceEEEecCccccc-ccccccCCCCeE
Confidence 99999999999999998665555665555565 567999999998653 222345678987
No 27
>1d2s_A SHBG, sex hormone-binding globulin; steroid transport, laminin G-like domain, jellyroll, androgen binding protein (ABP); HET: DHT; 1.55A {Homo sapiens} SCOP: b.29.1.4 PDB: 1kdk_A* 1kdm_A*
Probab=99.82 E-value=8.9e-20 Score=145.51 Aligned_cols=118 Identities=15% Similarity=0.203 Sum_probs=90.0
Q ss_pred ceeEEEEEEEeCCCCeEEEEeccCCCCCCCeEEEEEECCEEEEEEeC---------------CCCCCeEEEEeccEEEec
Q psy5026 6 QAWRFPIQFKPESWDGILFLTGERDDLNGDFMTLLIFEGYVEFSTPY---------------RPYADITVHRTVRTLILP 70 (293)
Q Consensus 6 ~~~~i~~~FrT~~~~GlL~~~~~~~~~~~~~~~l~l~~G~l~~~~~~---------------g~w~~~~~~~~~~~v~l~ 70 (293)
++++|+|+|||.+++|+|||.+... ..||++|+|++|+|++.++. |+||.+.+.+..+.+.|.
T Consensus 26 ~~~~is~~FrT~~~~GlLly~~~~~--~~df~~l~L~~G~l~~~~~~g~~~~~~~s~~~vnDG~WH~V~v~~~~~~~~L~ 103 (170)
T 1d2s_A 26 TKTSSSFEVRTWDPEGVIFYGDTNP--KDDWFMLGLRDGRPEIQLHNHWAQLTVGAGPRLDDGRWHQVEVKMEGDSVLLE 103 (170)
T ss_dssp CCCEEEEEEEESCSSEEEEEEEEET--TTEEEEEEEETTEEEEEEESSSCEEEEECSCCCCSSSCEEEEEEEETTEEEEE
T ss_pred CceEEEEEEEeCCCCEEEEEecCCC--CCCEEEEEEeCCEEEEEEECCCceEEEeCCCccCCCCCEEEEEEEeCCEEEEE
Confidence 4679999999999999999998742 35999999999999997654 479999999988887775
Q ss_pred ccCCC----CceeeeecCCceEEcCCCCCCCCCCCCCcccCceeeEEEEEEcCeeeeeccC
Q psy5026 71 YTVPS----GLFSRITFREPVFVGGRGNTSGLSDKLPTEKGFKGCIRHLDINDHLYNFNVS 127 (293)
Q Consensus 71 ~~g~~----~~~~~l~~~~~l~iGG~p~~~~~~~~~~~~~~F~GCi~~~~~n~~~~~~~~~ 127 (293)
.++.. .....++. .++||||+|...... ..+...+|.|||+++.+|+..+++...
T Consensus 104 VD~~~~~~~~~~~~l~~-~~lylGG~p~~~~~~-~~~~~~~F~GCi~~l~in~~~~~l~~~ 162 (170)
T 1d2s_A 104 VDGEEVLRLRQVSGHPI-MRIALGGLLFPASNL-RLPLVPALDGCLRRDSWLDKQAEISAS 162 (170)
T ss_dssp ETTEEEEEETTCCCCCE-EEEEESSCSSCGGGS-SSCCCCCCCEEEEEEEESCGGGEEEEE
T ss_pred ECCeeeeeeccCCCccc-ccEEEECcccchhhc-ccCCCCCeeeEeEEeEECCccceeeec
Confidence 55421 00011333 589999999754321 234568999999999999998776653
No 28
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=99.81 E-value=4.5e-19 Score=160.93 Aligned_cols=133 Identities=28% Similarity=0.532 Sum_probs=105.8
Q ss_pred ceeEecCCccceeeEEEEEEEEEeCCCCeEEEEeccCCCCCCCeEEEEEeCCEEEEEEECCCceEEEE--ecCCCCCCCe
Q psy5026 153 PDQVYQGLGEQYLSLLDLTIVFKAIEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLR--SSNPISLGEW 230 (293)
Q Consensus 153 s~~~~~~~~~~~~~~~~i~~~frt~~~~GlLl~~~~~~~~~~~~l~l~l~~g~v~~~~~~g~~~~~~~--~~~~~~dg~w 230 (293)
||+.|+.+.. ...++|+|+|||.+++|+|||.+... .+|++|+|.+|+++++++.|++...++ +...++||+|
T Consensus 15 Syl~~p~~~~--~~~~~is~~frT~~~~GlLly~~~~~---~dfi~l~L~~G~l~~~~~~G~g~~~~~~~s~~~vnDg~W 89 (410)
T 3asi_A 15 SYVALATLQA--YTSMHLFFQFKTTSLDGLILYNSGDG---NDFIVVELVKGYLHYVFDLGNGANLIKGSSNKPLNDNQW 89 (410)
T ss_dssp CEEEESCCCC--SSCEEEEEEEECSCSCEEEEEEEBST---TCEEEEEEETTEEEEEEESSSCEEEEECCCSSCSCSSSC
T ss_pred eeEEeCCCCC--CceEEEEEEEEeCCCCeEEEEeCCCC---CCEEEEEEECCEEEEEEECCCCcEEEEeccCcEeCCCCe
Confidence 8999987532 34689999999999999999986543 799999999999999999998887776 6789999999
Q ss_pred EEEEEEEeCC-EEEEEECCccceeEecCCCcccccCCCCeEEeccCCCC--ccCCCCCcCCCcee
Q psy5026 231 RKLRLTRTGR-HAYLQVDRFPSSQILSPGPFTQLSLSLSLYLGGVPDYN--IVSPKVKIKSSFIG 292 (293)
Q Consensus 231 h~V~i~r~~~-~~~l~VD~~~~~~~~~~~~~~~l~~~~~lyvGG~p~~~--~~~~~~~~~~~F~G 292 (293)
|+|.+.|.++ .+.|.||+..... ..++ ...+++...+||||+|... .++..+....+|+|
T Consensus 90 H~V~v~r~~~~~~~l~VD~~~~~~-~~~~-~~~l~~~~~lyvGG~p~~~~~~~~~~~~~~~~F~G 152 (410)
T 3asi_A 90 HNVMISRDTSNLHTVKIDTKITTQ-ITAG-ARNLDLKSDLYIGGVAKETYKSLPKLVHAKEGFQG 152 (410)
T ss_dssp EEEEEEECTTCEEEEEETTEEEEE-ECTT-CCCCCBCSCEEESCCCGGGGGGSCTTCCCSSBCCE
T ss_pred EEEEEEEcCCceEEEEECCEecee-ccCC-ccceecCCceEECccccchhhhhhhhcccccCchh
Confidence 9999999876 4799999985432 2332 3457777899999999753 23444445678887
No 29
>2h0b_A Neurexin-1-alpha; B-sandwich, cell adhesion; 2.10A {Bos taurus}
Probab=99.81 E-value=2.6e-19 Score=144.79 Aligned_cols=114 Identities=19% Similarity=0.407 Sum_probs=89.9
Q ss_pred ceeEEEEEEEeCCCCeEEEEeccCCCCCCCeEEEEEECCEEEEEEeCC------------------CCCCeEEEEeccEE
Q psy5026 6 QAWRFPIQFKPESWDGILFLTGERDDLNGDFMTLLIFEGYVEFSTPYR------------------PYADITVHRTVRTL 67 (293)
Q Consensus 6 ~~~~i~~~FrT~~~~GlL~~~~~~~~~~~~~~~l~l~~G~l~~~~~~g------------------~w~~~~~~~~~~~v 67 (293)
..++|+|+|||.+++|+|||.++. .||++|+|.+|++++.++.| +||.+.+.+..+.+
T Consensus 28 ~~~~isl~frT~~~~GlLl~~g~~----~d~l~l~L~~G~l~~~~~~G~g~~~~~~~~~~~~l~Dg~WH~V~v~r~~~~~ 103 (184)
T 2h0b_A 28 SSDEITLSFKTLQRNGLMLHTGKS----ADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNAWHDVKVTRNLRQV 103 (184)
T ss_dssp SEEEEEEEEEESCSCEEEEEECCT----TEEEEEEEETTEEEEEEEESSCEEEEEECCSSSCSSSSSCEEEEEEEETTEE
T ss_pred CccEEEEEEEeCCCCEEEEEeCCC----CCEEEEEEECCEEEEEEECCCCeEEEEEecCCcccCCCCeEEEEEEEeCCEE
Confidence 457899999999999999999654 49999999999999877644 69999999888877
Q ss_pred EecccCC-------CCceeeeecCCceEEcCCCCCCCCCCCCCcccCceeeEEEEEEcCeeeee
Q psy5026 68 ILPYTVP-------SGLFSRITFREPVFVGGRGNTSGLSDKLPTEKGFKGCIRHLDINDHLYNF 124 (293)
Q Consensus 68 ~l~~~g~-------~~~~~~l~~~~~l~iGG~p~~~~~~~~~~~~~~F~GCi~~~~~n~~~~~~ 124 (293)
.|..++. ++....++....+||||+|.....+ ..+...+|.|||+++.+|++.+++
T Consensus 104 ~L~VD~~~~~~~~~~~~~~~l~~~~~l~lGG~p~~~~~~-~~~~~~~F~GCi~~v~in~~~~~l 166 (184)
T 2h0b_A 104 TISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLP-GSPVSNNFMGCLKEVVYKNNDVRL 166 (184)
T ss_dssp EEEETTTEEEEEECSTTCCCEEECSEEEESCCTTGGGST-TCSCCCBCEEEEEEEEEEESSCEE
T ss_pred EEEEcCceeeeeECCCCceeccCCCCEEECCCCccccCc-CCcccCCCEEEeeEEEECCEEcch
Confidence 7755542 2333456777899999999754332 234467899999999999987654
No 30
>2r16_A Neurexin-1-alpha; beta-sandwich, cell adhesion, splicing; 1.04A {Bos taurus}
Probab=99.80 E-value=1.5e-18 Score=139.93 Aligned_cols=115 Identities=22% Similarity=0.301 Sum_probs=90.2
Q ss_pred ceeEEEEEEEeCCCCeEEEEeccCCCCCCCeEEEEEECCEEEEEEeCC---------------CCCCeEEEEeccEEEec
Q psy5026 6 QAWRFPIQFKPESWDGILFLTGERDDLNGDFMTLLIFEGYVEFSTPYR---------------PYADITVHRTVRTLILP 70 (293)
Q Consensus 6 ~~~~i~~~FrT~~~~GlL~~~~~~~~~~~~~~~l~l~~G~l~~~~~~g---------------~w~~~~~~~~~~~v~l~ 70 (293)
..++|+|+|||.+++|+|||.+... ..||++|+|.+|+|++.++.| +||.+.+.+..+.+.|.
T Consensus 27 ~~~~isl~FrT~~~~GlLl~~~~~~--~~d~l~L~L~~G~l~~~~~~G~~~~~~~~~~~lnDg~WH~V~v~r~~~~~~L~ 104 (182)
T 2r16_A 27 EAEDVSLRFRSQRAYGILMATTSRD--SADTLRLELDAGRVKLTVNLGKGPETLFAGYNLNDNEWHTVRVVRRGKSLKLT 104 (182)
T ss_dssp SEEEEEEEEECSCSSEEEEEEECSS--SCCEEEEEEETTEEEEEEESSSCCEEEEECSSCCSSSCEEEEEEEETTEEEEE
T ss_pred cceEEEEEEEECCCCEEEEEeCCCC--CCCEEEEEEECCEEEEEEECCCCceEEEcCcccCCCCeEEEEEEEECCEEEEE
Confidence 4678999999999999999998632 469999999999999988765 79999999988888775
Q ss_pred ccCC-------CCceeeeecCCceEEcCCCCCCCCCCCCCcccCceeeEEEEEEcCee-eeecc
Q psy5026 71 YTVP-------SGLFSRITFREPVFVGGRGNTSGLSDKLPTEKGFKGCIRHLDINDHL-YNFNV 126 (293)
Q Consensus 71 ~~g~-------~~~~~~l~~~~~l~iGG~p~~~~~~~~~~~~~~F~GCi~~~~~n~~~-~~~~~ 126 (293)
.++. ++....+++. ++||||+|..... .....+|.|||+++.+|+.. ++++.
T Consensus 105 VD~~~~~~~~~~g~~~~l~~~-~l~iGG~~~~~~~---~~~~~~F~GCi~~l~in~~~~~~~~~ 164 (182)
T 2r16_A 105 VDDQQAMTGQMAGDHTRLEFH-NIETGIITERRYL---SSVPSNFIGHLQSLTFNGMAYIDLCK 164 (182)
T ss_dssp ETTCCEEEEECCSSCCCEEEE-EEEESSCCCCTTC---SSCCCCCEEEEEEEEETTEEHHHHHH
T ss_pred ECCceeEeEECCCCccEEecc-CeEECCccccccc---CCCCCCCEEEEeEEEECCEEhHHHHh
Confidence 5542 3444556766 7999999875322 12346899999999999997 45543
No 31
>1f5f_A SHBG, sex hormone-binding globulin; jellyroll, signaling protein; HET: DHT; 1.70A {Homo sapiens} SCOP: b.29.1.4 PDB: 1lhw_A* 1lho_A* 1lhn_A* 1lhv_A* 1lhu_A*
Probab=99.80 E-value=5e-19 Score=145.56 Aligned_cols=118 Identities=15% Similarity=0.198 Sum_probs=89.1
Q ss_pred ceeEEEEEEEeCCCCeEEEEeccCCCCCCCeEEEEEECCEEEEEEeC---------------CCCCCeEEEEeccEEEec
Q psy5026 6 QAWRFPIQFKPESWDGILFLTGERDDLNGDFMTLLIFEGYVEFSTPY---------------RPYADITVHRTVRTLILP 70 (293)
Q Consensus 6 ~~~~i~~~FrT~~~~GlL~~~~~~~~~~~~~~~l~l~~G~l~~~~~~---------------g~w~~~~~~~~~~~v~l~ 70 (293)
++++|+|+|||.+++|+|||++... ..||++|+|++|+|++.++. |+||.+.+.+..+.+.|.
T Consensus 38 ~~~~is~~frT~~~~GlLly~~~~~--~~d~~~l~L~~G~l~~~~~~g~~~~~~~s~~~vnDG~WH~V~v~r~~~~~~L~ 115 (205)
T 1f5f_A 38 TKTSSSFEVRTWDPEGVIFYGDTNP--KDDWFMLGLRDGRPEIQLHNHWAQLTVGAGPRLDDGRWHQVEVKMEGDSVLLE 115 (205)
T ss_dssp CCCEEEEEEEESCSSEEEEEEEEET--TTEEEEEEEETTEEEEEEESSSCEEEEECSCCCCSSSCEEEEEEEETTEEEEE
T ss_pred CceEEEEEEEeCCCCEEEEEeCCCC--CCCEEEEEEECCEEEEEEECCCceEEEecCCccCCCCCEEEEEEEeCCEEEEE
Confidence 4579999999999999999998742 35999999999999997754 479999999988877775
Q ss_pred ccCCC--------Cc-eeeeecCCceEEcCCCCCCCCCCCCCcccCceeeEEEEEEcCeeeeecc
Q psy5026 71 YTVPS--------GL-FSRITFREPVFVGGRGNTSGLSDKLPTEKGFKGCIRHLDINDHLYNFNV 126 (293)
Q Consensus 71 ~~g~~--------~~-~~~l~~~~~l~iGG~p~~~~~~~~~~~~~~F~GCi~~~~~n~~~~~~~~ 126 (293)
.++.. +. .........+||||+|...... ..+...+|+|||+++.+|+..+++..
T Consensus 116 VD~~~~~~~~~~~~~~~~~~~~~~~lyiGG~p~~~~~~-~~~~~~~F~GCi~~l~i~~~~~~l~~ 179 (205)
T 1f5f_A 116 VDGEEVLRLRQVSGPLTSKRHPIMRIALGGLLFPASNL-RLPLVPALDGCLRRDSWLDKQAEISA 179 (205)
T ss_dssp ETTEEEEEECSCCCCC----CCEEEEEESSCSSCGGGS-SSCCCCCCCEEEEEEECSCGGGEEEE
T ss_pred ECCeeeeeeeccCCCcccccCCCceEEEeCccCccccc-cccCCCCeeEEeeeeEECCeeccccc
Confidence 54421 11 1112222689999999754321 23556899999999999999888864
No 32
>3bod_A Neurexin-1-alpha; neurexin1D, LNS6, alternative splicing, calcium, cell adhesion, EGF-like domain, glycoprotein, membrane, metal- binding; 1.70A {Mus musculus} PDB: 2vh8_C 2xb6_C* 2wqz_C* 1c4r_A 3bop_A 3mw4_A*
Probab=99.79 E-value=1.2e-18 Score=140.01 Aligned_cols=110 Identities=18% Similarity=0.259 Sum_probs=88.0
Q ss_pred ceeEEEEEEEeCCCCeEEEEeccCCCCCCCeEEEEEECCEEEEEEeCC----------------CCCCeEEEEeccEEEe
Q psy5026 6 QAWRFPIQFKPESWDGILFLTGERDDLNGDFMTLLIFEGYVEFSTPYR----------------PYADITVHRTVRTLIL 69 (293)
Q Consensus 6 ~~~~i~~~FrT~~~~GlL~~~~~~~~~~~~~~~l~l~~G~l~~~~~~g----------------~w~~~~~~~~~~~v~l 69 (293)
...+|+|+|||.+++|+|||.... ....||++|+|.+|+|++.++.| +||.+.+.+..+.+.|
T Consensus 29 ~~~~isl~FrT~~~~GlLl~~~~~-~~~~dfi~l~L~~G~l~~~~~~G~~~~~~~~~~~~vnDg~WH~V~v~r~~~~~~L 107 (178)
T 3bod_A 29 RADRLAIGFSTVQKEAVLVRVDSS-SGLGDYLELHIHQGKIGVKFNVGTDDIAIEESNAIINDGKYHVVRFTRSGGNATL 107 (178)
T ss_dssp SEEEEEEEEECCCSSEEEEEEEES-SSSCCEEEEEEETTEEEEEEESSSCCEEEECCSSCCCSSSCEEEEEEEETTEEEE
T ss_pred cccEEEEEEEECCCCEEEEEEcCC-CCCCCEEEEEEECCEEEEEEECCCCceEEecCCcCccCCCeEEEEEEEeCCEEEE
Confidence 467999999999999999996422 12369999999999999987765 7999999998888877
Q ss_pred cccCCC--------CceeeeecCCceEEcCCCCCCCCCCCCCcccCceeeEEEEEEcCee-eeecc
Q psy5026 70 PYTVPS--------GLFSRITFREPVFVGGRGNTSGLSDKLPTEKGFKGCIRHLDINDHL-YNFNV 126 (293)
Q Consensus 70 ~~~g~~--------~~~~~l~~~~~l~iGG~p~~~~~~~~~~~~~~F~GCi~~~~~n~~~-~~~~~ 126 (293)
..++.. +....++...++||||+|. ..+|.|||+++.+|+.. ++++.
T Consensus 108 ~VD~~~~~~~~~~~~~~~~l~~~~~lylGG~p~----------~~~F~GCi~~v~in~~~vl~l~~ 163 (178)
T 3bod_A 108 QVDSWPVIERYPAGRQLTIFNSQATIIIGGKEQ----------GQPFQGQLSGLYYNGLKVLNMAA 163 (178)
T ss_dssp EETTSCCEEECCCSCCCCCBCCEEEEEESCCTT----------SCBCCEEEEEEEETTEEHHHHHH
T ss_pred EEeCCceeeeecCCCcceEEeCCCcEEEecccC----------CCCCEEEEEEEEECCEehHhHhh
Confidence 554421 1224477777899999986 27899999999999997 77765
No 33
>2r1d_A Neurexin-1-beta, neurexin I-beta; beta-sandwich, cell adhesion, splicing; 2.60A {Rattus norvegicus} SCOP: b.29.1.4 PDB: 3biw_E*
Probab=99.77 E-value=4.5e-18 Score=141.54 Aligned_cols=110 Identities=18% Similarity=0.259 Sum_probs=87.7
Q ss_pred ceeEEEEEEEeCCCCeEEEEeccCCCCCCCeEEEEEECCEEEEEEeCC----------------CCCCeEEEEeccEEEe
Q psy5026 6 QAWRFPIQFKPESWDGILFLTGERDDLNGDFMTLLIFEGYVEFSTPYR----------------PYADITVHRTVRTLIL 69 (293)
Q Consensus 6 ~~~~i~~~FrT~~~~GlL~~~~~~~~~~~~~~~l~l~~G~l~~~~~~g----------------~w~~~~~~~~~~~v~l 69 (293)
...+|+|+|||.+++|+|||.+.. ....||++|+|++|+|++.++.| +||.+.+.+..+.+.|
T Consensus 63 ~~~~isl~FrT~~~~GlLl~~~~~-~~~~dfi~L~L~~G~l~~~~~~G~~~~~~~~~~~~vnDG~WH~V~v~r~~~~~~L 141 (226)
T 2r1d_A 63 RADRLAIGFSTVQKEAVLVRVDSS-SGLGDYLELHIHQGKIGVKFNVGTDDIAIEESNAIINDGKYHVVRFTRSGGNATL 141 (226)
T ss_dssp SEEEEEEEEECCCSSEEEEEEEEC-TTCCCEEEEEEETTEEEEEEESSSCEEEEECCSSCCCSSSCEEEEEEEETTEEEE
T ss_pred cccEEEEEEEeCCCCEEEEEecCC-CCCCCEEEEEEECCEEEEEEECCCCcEEEEeCCeEecCCCCEEEEEEEeCCEEEE
Confidence 456899999999999999997532 12369999999999999987765 7999999999888777
Q ss_pred cccCC--------CCceeeeecCCceEEcCCCCCCCCCCCCCcccCceeeEEEEEEcCee-eeecc
Q psy5026 70 PYTVP--------SGLFSRITFREPVFVGGRGNTSGLSDKLPTEKGFKGCIRHLDINDHL-YNFNV 126 (293)
Q Consensus 70 ~~~g~--------~~~~~~l~~~~~l~iGG~p~~~~~~~~~~~~~~F~GCi~~~~~n~~~-~~~~~ 126 (293)
..++. .+....++...++||||+|. ..+|.|||+++.+|+.. ++++.
T Consensus 142 ~VD~~~~~~~~~~~~~~~~l~~~~~lylGG~p~----------~~~F~GCi~~v~ing~~vl~la~ 197 (226)
T 2r1d_A 142 QVDSWPVIERYPAGRQLTIFNSQATIIIGGKEQ----------GQPFQGQLSGLYYNGLKVLNMAA 197 (226)
T ss_dssp EETTSCCEEECCSSCCCCCBCSEEEEEESSTTT----------TCCCCEEEEEEEETTBCHHHHHH
T ss_pred EEcCccceEEecCCCcceeccCCCeEEEccccC----------CCCCeEEEeeEEECCEeHHhhhh
Confidence 55442 23344577778999999985 17899999999999985 56654
No 34
>2r1b_A Neurexin-1-beta, neurexin I-beta; beta-sandwich, cell adhesion, splicing; 1.72A {Rattus norvegicus} PDB: 3mw2_A* 3b3q_E* 3mw3_A*
Probab=99.76 E-value=8.3e-18 Score=139.53 Aligned_cols=110 Identities=20% Similarity=0.287 Sum_probs=83.2
Q ss_pred ceeEEEEEEEeCCCCeEEEEeccCCCCCCCeEEEEEECCEEEEEEeCC----------------CCCCeEEEEeccEEEe
Q psy5026 6 QAWRFPIQFKPESWDGILFLTGERDDLNGDFMTLLIFEGYVEFSTPYR----------------PYADITVHRTVRTLIL 69 (293)
Q Consensus 6 ~~~~i~~~FrT~~~~GlL~~~~~~~~~~~~~~~l~l~~G~l~~~~~~g----------------~w~~~~~~~~~~~v~l 69 (293)
...+|+|+|||.+++|+|||.+.. ....||++|+|++|+|++.++.| +||.+.+.+..+.+.|
T Consensus 35 ~~~~isl~FrT~~~~GlLly~~~~-~~~~dfi~LeL~~G~l~~~~~~G~~~~~~~~~~~~vnDG~WH~V~v~r~~~~~~L 113 (220)
T 2r1b_A 35 RADRLAIGFSTVQKEAVLVRVDSS-SGLGDYLELHIHQGKIGVKFNVGTDDIAIEESNAIINDGKYHVVRFTRSGGNATL 113 (220)
T ss_dssp SEEEEEEEEECCCSSEEEEEEEES-TTCCCEEEEEEETTEEEEEEESSSSCEEEECTTCCCCSSSCEEEEEEEETTEEEE
T ss_pred cCcEEEEEEEeCCCCEEEEEecCC-CCCCCeEEEEEECCEEEEEEECCCCceEEEeCceEecCCceEEEEEEEeCCEEEE
Confidence 355899999999999999995432 12369999999999999987765 7999999999988777
Q ss_pred cccCCC-------Ccee--eee-----------------------------cCCceEEcCCCCCCCCCCCCCcccCceee
Q psy5026 70 PYTVPS-------GLFS--RIT-----------------------------FREPVFVGGRGNTSGLSDKLPTEKGFKGC 111 (293)
Q Consensus 70 ~~~g~~-------~~~~--~l~-----------------------------~~~~l~iGG~p~~~~~~~~~~~~~~F~GC 111 (293)
..++.. +... .++ ...++||||+|. ..+|+||
T Consensus 114 ~VD~~~~~~~~~~g~~~~~~l~~~~~~ip~~~~~~~~~~~~~~~~~~~~~n~~~~l~lGG~p~----------~~~F~GC 183 (220)
T 2r1b_A 114 QVDSWPVIERYPAGNNDNERLAIARQRIPYRLGRVVDEWLLDKGRQLTIFNSQATIIIGGKEQ----------GQPFQGQ 183 (220)
T ss_dssp EETTSCCEEECC-----------------CHHHHHHHHHHHHHHHGGGSBCCEEEEEESSTTT----------TCCCCEE
T ss_pred EECCcceeeeccCCCccchheeccccccccccccccccccccccccceEecCCCcEEECCccC----------CCCCEEE
Confidence 554421 2111 222 256899999981 4799999
Q ss_pred EEEEEEcCee-eeecc
Q psy5026 112 IRHLDINDHL-YNFNV 126 (293)
Q Consensus 112 i~~~~~n~~~-~~~~~ 126 (293)
|+++.+|+.. ++++.
T Consensus 184 i~~l~ing~~vl~la~ 199 (220)
T 2r1b_A 184 LSGLYYNGLKVLNMAA 199 (220)
T ss_dssp EEEEEETTBCHHHHHH
T ss_pred EeEEEECCChHHhHhh
Confidence 9999999985 57765
No 35
>3flp_A SAP-like pentraxin; physiological doubly-stacked heptamer, pentraxin fold, cyclic heptamer, invertebrate lectin, sugar binding protein; 2.30A {Limulus polyphemus} PDB: 3flr_A 3flt_A
Probab=98.17 E-value=4.9e-05 Score=62.26 Aligned_cols=136 Identities=12% Similarity=0.163 Sum_probs=80.6
Q ss_pred ceeEecCC-ccceeeEEEEEEEEEeC-CCCeEEEEeccCCCCCCCeEEEEEe-CCE--EEEEEECCC-ceEEEEecCCCC
Q psy5026 153 PDQVYQGL-GEQYLSLLDLTIVFKAI-EPNGILLYNGHRADGVGDFIALYLN-DRY--VDFTFDLGT-GAATLRSSNPIS 226 (293)
Q Consensus 153 s~~~~~~~-~~~~~~~~~i~~~frt~-~~~GlLl~~~~~~~~~~~~l~l~l~-~g~--v~~~~~~g~-~~~~~~~~~~~~ 226 (293)
+|+.+.+. ..+....+++.+.+++. ...+.||..+...+ .+-+.|... ++. ..+.+..++ ....+..+..+.
T Consensus 18 ~yv~l~~~~~~p~l~~fTvc~wv~~~~~~~~~lfSy~~~~~--~n~l~l~~~~~~~g~~~~~l~i~g~~~~~~~~~~~~~ 95 (217)
T 3flp_A 18 KFPHLRFMQTLPAVRQLTVCQRIKPFHRNTGYIFSCATSNQ--DNQFITSMYVKSDGTLNLGLQVNASSNKYISCPIEIE 95 (217)
T ss_dssp BCCEEEESSCBCCBSEEEEEEEEEESCSSCEEEEEEEETTE--EEEEEEEEEECTTSEEEEEEEETTCCCEEEEEEEECC
T ss_pred CEEEEecCCCCCCCccEEEEEEEEecCCCCeeEEEEECCCC--CceEEEEEeCCCCcceEEEEEECCccceeEEcccccC
Confidence 68887642 22334689999999954 34567775544332 345666664 333 333333432 223444555799
Q ss_pred CCCeEEEEEEEeC--CEEEEEECCccceeEecCCCcccccCCCCeEEeccCCCCccCCCCCcCCCcee
Q psy5026 227 LGEWRKLRLTRTG--RHAYLQVDRFPSSQILSPGPFTQLSLSLSLYLGGVPDYNIVSPKVKIKSSFIG 292 (293)
Q Consensus 227 dg~wh~V~i~r~~--~~~~l~VD~~~~~~~~~~~~~~~l~~~~~lyvGG~p~~~~~~~~~~~~~~F~G 292 (293)
+|+||+|-+.++. +.+.|.|||..............+...+.+.||...+. ...+......|.|
T Consensus 96 ~g~W~Hv~~t~d~~~G~~~lYvdG~~~~~~~~~~~g~~i~~~g~l~lG~~~~~--~gg~f~~~~~f~G 161 (217)
T 3flp_A 96 LGQWYHVCHVWSGVDGRMAVYANGSPCGTMENVGKGHQISAGGTVVIGQEQDK--IGGGFEEQESWSG 161 (217)
T ss_dssp TTSCEEEEEEEETTTTEEEEEETTEEEEEESCSSTTCCBCSCBEEEESSCCSB--TTBCCCGGGCCCE
T ss_pred CCCEEEEEEEEECCCCEEEEEECCEEecceeccccCcEECCCCEEEeCCcccC--CCCccCCCCceEE
Confidence 9999999999985 68999999986543222222223445667888875542 1222333456666
No 36
>1za4_A Thrombospondin 1; TSP-1, NTSP-1, HBD, arixtra, cell adhesion; HET: SGN; 1.90A {Homo sapiens} SCOP: b.29.1.4 PDB: 2ouh_A 2ouj_A
Probab=98.17 E-value=5.8e-05 Score=63.19 Aligned_cols=107 Identities=14% Similarity=0.207 Sum_probs=71.4
Q ss_pred eEEEEEEEEEeC-CCCeEEEEeccCCCCCCCeEEEEEe--CCEEEEEEECCCceEEEE-ecCCCCCCCeEEEEEEEeCCE
Q psy5026 166 SLLDLTIVFKAI-EPNGILLYNGHRADGVGDFIALYLN--DRYVDFTFDLGTGAATLR-SSNPISLGEWRKLRLTRTGRH 241 (293)
Q Consensus 166 ~~~~i~~~frt~-~~~GlLl~~~~~~~~~~~~l~l~l~--~g~v~~~~~~g~~~~~~~-~~~~~~dg~wh~V~i~r~~~~ 241 (293)
..|.|.+.||.. ...|.||.+.+... ...++.|.+. ...+.+.|...++...+. ....+.||+||+|.+...+..
T Consensus 72 ~eFsil~tlr~~~~~~g~LfsI~~~~g-~~~ql~l~~~G~~~~l~~~Y~~~g~~~~~~f~~~~L~Dg~WH~lalsV~~~~ 150 (251)
T 1za4_A 72 KGFLLLASLRQMKKTRGTLLALERKDH-SGQVFSVVSNGKAGTLDLSLTVQGKQHVVSVEEALLATGQWKSITLFVQEDR 150 (251)
T ss_dssp TEEEEEEEEEECTTCEEEEEEEEETTS-SCEEEEEEEETTTTEEEEEEEETTEEEEEEESSCCCCSSSCEEEEEEEETTE
T ss_pred CcEEEEEEEEecCCCCeEEEEEEeCCC-CEEEEEEEECCCCcEEEEEEEcCCCeeeEEEecccccCCCEEEEEEEEECCE
Confidence 578999999966 55679988766531 1346666653 237888886554433333 356799999999999999999
Q ss_pred EEEEECCccceeEecCCCcccc-----cCCCCeEEec
Q psy5026 242 AYLQVDRFPSSQILSPGPFTQL-----SLSLSLYLGG 273 (293)
Q Consensus 242 ~~l~VD~~~~~~~~~~~~~~~l-----~~~~~lyvGG 273 (293)
++|.||-.+............+ .....++||-
T Consensus 151 VtLyvDC~~~~~~~l~~~~~~i~~~~~~~~~~~~iGq 187 (251)
T 1za4_A 151 AQLYIDCEKMENAELDVPIQSVFTRDLASIARLRIAK 187 (251)
T ss_dssp EEEEETTSCCEEEECSSCGGGTSCTTGGGTEEEEESC
T ss_pred EEEEECCcccceeeccCccccccccccCCCcEEEEEe
Confidence 9999999866444332222222 1144678884
No 37
>2v73_A CBM40, putative EXO-alpha-sialidase; carbohydrate-binding module, bacterial pathogen, sialic acid, sugar-binding protein; HET: SIA; 2.2A {Clostridium perfringens}
Probab=98.16 E-value=0.00022 Score=56.31 Aligned_cols=119 Identities=14% Similarity=0.142 Sum_probs=79.3
Q ss_pred eEEEEEEEEEeCCCC-eEEEEeccCCCCCCCeEEEEEeCCEEEEEEECCCc--eEEE-Ee-cCCCCCCCeEEEEEEEeC-
Q psy5026 166 SLLDLTIVFKAIEPN-GILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTG--AATL-RS-SNPISLGEWRKLRLTRTG- 239 (293)
Q Consensus 166 ~~~~i~~~frt~~~~-GlLl~~~~~~~~~~~~l~l~l~~g~v~~~~~~g~~--~~~~-~~-~~~~~dg~wh~V~i~r~~- 239 (293)
...+|.+.||+.... --||.+.+... ...|+.|+|.+|++.+.+....+ .... ++ .... +++||+|.+..+.
T Consensus 40 ~~gTI~v~fks~~~~~q~LfSIsN~k~-~n~yf~lyi~~g~lg~e~R~~~~~~~~~~~~~a~v~~-~~~wntvaf~~d~~ 117 (191)
T 2v73_A 40 EEGTIVTRFNMNDTSIQSLIGLSDGNK-ANNYFSLYVSGGKVGYELRRQEGNGDFNVHHSADVTF-NRGINTLALKIEKG 117 (191)
T ss_dssp SSEEEEEEEEECCCSCEEEEEEECTTC-SSCEEEEEECSSEEEEEEEECTTSSCEEEEEEEECCC-CSSCEEEEEEEETT
T ss_pred CCcEEEEEEecCCCcceEEEEccCCCC-ccceEEEEEeCCEEEEEEecCCCceeeeeecccceec-CCceEEEEEEEcCC
Confidence 457888999987633 35666655432 37899999999999998776433 2222 22 2333 4599999999986
Q ss_pred CEEEEEECCccceeEecCC--CcccccCCCCeEEeccCCCCccCCCCCcCCCcee
Q psy5026 240 RHAYLQVDRFPSSQILSPG--PFTQLSLSLSLYLGGVPDYNIVSPKVKIKSSFIG 292 (293)
Q Consensus 240 ~~~~l~VD~~~~~~~~~~~--~~~~l~~~~~lyvGG~p~~~~~~~~~~~~~~F~G 292 (293)
...+|.+||+.......+. ....+++ ..+.|||...... ....+|.|
T Consensus 118 ~~~~ly~NG~~V~t~~~~~~~fi~~i~l-n~~~IG~~~r~sg-----~~~y~F~G 166 (191)
T 2v73_A 118 IGAKIFLNGSLVKTVSDPNIKFLNAINL-NSGFIGKTDRANG-----YNEYLFRG 166 (191)
T ss_dssp TEEEEEETTEEEEEEECTTCCCGGGSCC-CEEEESSCCCCSS-----SCCCCCCE
T ss_pred ccEEEEECCEEEEEEecccccceeecCC-ceEEEcceeecCC-----ceeeccCC
Confidence 5999999999775554332 2233433 4899999887421 23456665
No 38
>2erf_A Thrombospondin-1; TSP-1, N-terminal TSPN, HBD, sugar binding protein; 1.45A {Homo sapiens} SCOP: b.29.1.4 PDB: 2es3_A 1z78_A
Probab=98.06 E-value=0.00013 Score=59.31 Aligned_cols=108 Identities=14% Similarity=0.196 Sum_probs=72.8
Q ss_pred eEEEEEEEEEeC-CCCeEEEEeccCCCCCCCeEEEEEe--CCEEEEEEECCCceEEEE-ecCCCCCCCeEEEEEEEeCCE
Q psy5026 166 SLLDLTIVFKAI-EPNGILLYNGHRADGVGDFIALYLN--DRYVDFTFDLGTGAATLR-SSNPISLGEWRKLRLTRTGRH 241 (293)
Q Consensus 166 ~~~~i~~~frt~-~~~GlLl~~~~~~~~~~~~l~l~l~--~g~v~~~~~~g~~~~~~~-~~~~~~dg~wh~V~i~r~~~~ 241 (293)
..+.|.+.||.. ...|.||.+.+... ...++.|.+. ...+.+.|...+....+. ....+.||+||+|.+...+..
T Consensus 62 ~eFsi~~t~r~~~~~~~~LfsI~~~~~-~~~ql~l~l~g~~~~l~~~y~~~g~~~~~~f~~v~l~dg~WH~l~l~V~~~~ 140 (209)
T 2erf_A 62 KGFLLLASLRQMKKTRGTLLALERKDH-SGQVFSVVSNGKAGTLDLSLTVQGKQHVVSVEEALLATGQWKSITLFVQEDR 140 (209)
T ss_dssp TEEEEEEEEEECTTCEEEEEEEEETTS-SCEEEEEEEETTTTEEEEEEEETTEEEEEEESSCCCCSSSEEEEEEEEETTE
T ss_pred CCEEEEEEEEcCCCCCceEEEEEcCCC-CEEEEEEEEcCCCCEEEEEEcCCCCEEEEEEeccccCCCcEEEEEEEEECCE
Confidence 578999999965 56788887766531 1457888885 347888886544443343 246799999999999999999
Q ss_pred EEEEECCccceeEecCCCcccc-cC----CCCeEEecc
Q psy5026 242 AYLQVDRFPSSQILSPGPFTQL-SL----SLSLYLGGV 274 (293)
Q Consensus 242 ~~l~VD~~~~~~~~~~~~~~~l-~~----~~~lyvGG~ 274 (293)
++|.||-..............+ .. ...+++|-.
T Consensus 141 v~L~vDC~~~~~~~l~~~~~~~~~~~~~~~~~~~iGq~ 178 (209)
T 2erf_A 141 AQLYIDCEKMENAELDVPIQSVFTRDLASIARLRIAKG 178 (209)
T ss_dssp EEEEETTTEEEEEECSSCGGGTCCTTHHHHEEEEESCC
T ss_pred EEEEEcCeEeEeEEccCCchhccccccCCceEEEEecC
Confidence 9999998865433332222221 11 346888843
No 39
>3kqr_A Serum amyloid P-component; glycoprotein, disulfide bond, lectin, metal-binding secreted; HET: NAG; 1.50A {Homo sapiens} SCOP: b.29.1.5 PDB: 1lgn_A* 1gyk_A 2a3w_A* 2a3x_A* 2a3y_A* 1sac_A* 3d5o_A* 2w08_A*
Probab=98.02 E-value=0.00036 Score=56.50 Aligned_cols=131 Identities=12% Similarity=-0.014 Sum_probs=80.5
Q ss_pred ceeEecCCccceeeEEEEEEEEEeCC-CCeEEEEeccCCCCCCCeEEEEE-eCCEEEEEEECCCceEEEEecCCCCCCCe
Q psy5026 153 PDQVYQGLGEQYLSLLDLTIVFKAIE-PNGILLYNGHRADGVGDFIALYL-NDRYVDFTFDLGTGAATLRSSNPISLGEW 230 (293)
Q Consensus 153 s~~~~~~~~~~~~~~~~i~~~frt~~-~~GlLl~~~~~~~~~~~~l~l~l-~~g~v~~~~~~g~~~~~~~~~~~~~dg~w 230 (293)
+|+.+.+........+++.+.+++.. ..+.||..+.... ..-+.+.. .++.+.+.+ ++....+. .++.||+|
T Consensus 18 ~yv~l~~~~~~~l~~fTvc~wv~~~~~~~~tlfSy~~~~~--~nel~l~~~~~~~~~l~i--~g~~~~~~--~~~~~g~W 91 (204)
T 3kqr_A 18 DHVNLITPLEKPLQNFTLCFRAYSDLSRAYSLFSYNTQGR--DNELLVYKERVGEYSLYI--GRHKVTSK--VIEKFPAP 91 (204)
T ss_dssp CEEEEECCCCSCBSEEEEEEEEECCCCSCEEEEEEEETTE--EEEEEEEEEETTEEEEEE--TTEEEEEE--CCCCSSCC
T ss_pred CEEEEeCCCCCCcCCEEEEEEEEeCCCCCeEEEEEECCCC--CceEEEEEcCCCeEEEEE--CCeEEEEe--cccCCCce
Confidence 68888643122246899999999875 4677776554432 22344544 357776665 33333343 57899999
Q ss_pred EEEEEEEeC--CEEEEEECCccceeEecCCCcccccCCCCeEEeccCCCCccCCCCCcCCCcee
Q psy5026 231 RKLRLTRTG--RHAYLQVDRFPSSQILSPGPFTQLSLSLSLYLGGVPDYNIVSPKVKIKSSFIG 292 (293)
Q Consensus 231 h~V~i~r~~--~~~~l~VD~~~~~~~~~~~~~~~l~~~~~lyvGG~p~~~~~~~~~~~~~~F~G 292 (293)
|+|-+..+. +.+.|.|||........ .....+...+.+.||...+.. ..+......|.|
T Consensus 92 ~Hv~~twd~~~G~~~lyvdG~~~~~~~~-~~g~~i~~~g~l~lGq~qd~~--gg~f~~~~~f~G 152 (204)
T 3kqr_A 92 VHICVSWESSSGIAEFWINGTPLVKKGL-RQGYFVEAQPKIVLGQEQDSY--GGKFDRSQSFVG 152 (204)
T ss_dssp EEEEEEEETTTCEEEEEETTEECCCEEC-CTTCCBCSSCEEEESSCCSSS--SCCCCGGGCCCE
T ss_pred EEEEEEEECCCCeEEEEECCEEeeeecc-CCCCEECCCcEEEEcccccCC--CCCcCcccceeE
Confidence 999999984 58899999986533211 111234455678888765432 223333456766
No 40
>3pvn_A C-reactive protein; pentraxin family, immune system; 1.98A {Homo sapiens} SCOP: b.29.1.5 PDB: 1gnh_A 1lj7_A 3l2y_A 1b09_A 3pvo_A
Probab=97.98 E-value=0.00035 Score=56.64 Aligned_cols=131 Identities=13% Similarity=0.060 Sum_probs=81.0
Q ss_pred ceeEecCCccceeeEEEEEEEEEeCC---CCeEEEEeccCCCCCCCeEEEEEe-CCEEEEEEECCCceEEEEecCCCCCC
Q psy5026 153 PDQVYQGLGEQYLSLLDLTIVFKAIE---PNGILLYNGHRADGVGDFIALYLN-DRYVDFTFDLGTGAATLRSSNPISLG 228 (293)
Q Consensus 153 s~~~~~~~~~~~~~~~~i~~~frt~~---~~GlLl~~~~~~~~~~~~l~l~l~-~g~v~~~~~~g~~~~~~~~~~~~~dg 228 (293)
+|+.+.+........+++.+.+++.. .++.||.-+.... ..-+.|... ++.+.+.+ ++....+. .++.+|
T Consensus 18 ~yv~l~~~~~~~l~~fTvc~wv~~~~~~~~~~~lfSy~~~~~--~n~l~l~~~~~g~~~l~i--~g~~~~~~--~~~~~g 91 (206)
T 3pvn_A 18 SYVSLKAPLTKPLKAFTVCLHFYTELSSTRGYSIFSYATKRQ--DNEILIFWSKDIGYSFTV--GGSEILFE--VPEVTV 91 (206)
T ss_dssp CEEEECCCCCSCBSEEEEEEEEEESGGGTCCEEEEEEEETTE--EEEEEEEEETTTEEEEEE--TTEEEEEE--CSSCCS
T ss_pred CEEEEecCCCCCcCCEEEEEEEEecCCCCCcEEEEEEEcCCC--CCEEEEEEcCCCeEEEEE--CCeEEEEe--ccCCCC
Confidence 68888653222246899999999875 4677776554432 334555554 57777665 33333333 578999
Q ss_pred CeEEEEEEEeC--CEEEEEECCccceeEecCCCcccccCCCCeEEeccCCCCccCCCCCcCCCcee
Q psy5026 229 EWRKLRLTRTG--RHAYLQVDRFPSSQILSPGPFTQLSLSLSLYLGGVPDYNIVSPKVKIKSSFIG 292 (293)
Q Consensus 229 ~wh~V~i~r~~--~~~~l~VD~~~~~~~~~~~~~~~l~~~~~lyvGG~p~~~~~~~~~~~~~~F~G 292 (293)
+||+|-+..+. +.+.|.|||........ .....+...+.+.||.-.+. ...+......|.|
T Consensus 92 ~W~Hv~~twd~~~G~~~lyvdG~~~~~~~~-~~g~~i~~~g~l~lGq~qd~--~gg~f~~~~~f~G 154 (206)
T 3pvn_A 92 APVHICTSWESASGIVEFWVDGKPRVRKSL-KKGYTVGAEASIILGQEQDS--FGGNFEGSQSLVG 154 (206)
T ss_dssp SCEEEEEEEETTTCEEEEEETTEECCCEEC-CTTCCBCSSCEEEESSCCSB--TTBCCCGGGCCCE
T ss_pred ceEEEEEEEECCCCeEEEEECCEEcccccc-cCCcEECCCCEEEEcccccc--CCCCcCCccceEE
Confidence 99999999985 58899999986532211 11123445578888865442 1222333456766
No 41
>2uur_A Collagen alpha-1(IX) chain; glycoprotein, hydroxylation, structural protein, NC4, collagen IX, polymorphism, extracellular matrix; 1.8A {Homo sapiens}
Probab=97.90 E-value=0.00022 Score=59.37 Aligned_cols=106 Identities=17% Similarity=0.163 Sum_probs=72.4
Q ss_pred eEEEEEEEEE-eCCC---CeEEEEeccCCCCCCCeEEEEEe--CCEEEEEEECCCc-eEEEEecC--CCCCCCeEEEEEE
Q psy5026 166 SLLDLTIVFK-AIEP---NGILLYNGHRADGVGDFIALYLN--DRYVDFTFDLGTG-AATLRSSN--PISLGEWRKLRLT 236 (293)
Q Consensus 166 ~~~~i~~~fr-t~~~---~GlLl~~~~~~~~~~~~l~l~l~--~g~v~~~~~~g~~-~~~~~~~~--~~~dg~wh~V~i~ 236 (293)
..+.|-+.|| .... ...||.+.+... ..++.|.+. ...+.+.+....+ ...+.... .+.||+||+|.+.
T Consensus 86 ~eFsil~tlr~~~~~~~~~~~L~sI~d~~~--~~qlgv~l~g~~~~l~~~y~~~~g~~q~v~F~~~~~L~Dg~WHklals 163 (245)
T 2uur_A 86 EEYSFLTTFRMTGSTLKKNWNIWQIQDSSG--KEQVGIKINGQTQSVVFSYKGLDGSLQTAAFSNLSSLFDSQWHKIMIG 163 (245)
T ss_dssp SSEEEEEEEECCGGGGGCEEEEEEEECTTS--CEEEEEEEEGGGTEEEEEEEBTTSCEEEEEECCCGGGCSSSCEEEEEE
T ss_pred CCEEEEEEEEcCCCCCCcceEEEEEECCCC--cEEEEEEEcCCCCEEEEEecCCCCCeeEEEecCCccccCCCEEEEEEE
Confidence 4688888888 3433 345777766542 567888886 4577777755433 34445444 5899999999999
Q ss_pred EeCCEEEEEECCccceeEecCCCcccccCCCCeEEecc
Q psy5026 237 RTGRHAYLQVDRFPSSQILSPGPFTQLSLSLSLYLGGV 274 (293)
Q Consensus 237 r~~~~~~l~VD~~~~~~~~~~~~~~~l~~~~~lyvGG~ 274 (293)
..++.++|.||=......... ....++..+.++||-.
T Consensus 164 V~~~~VtLyvDC~~~~~~~l~-~~~~i~~~G~~~lG~~ 200 (245)
T 2uur_A 164 VERSSATLFVDCNRIESLPIK-PRGPIDIDGFAVLGKL 200 (245)
T ss_dssp EETTEEEEEETTEEEEEEECC-CBCCCCCSSEEEEEEE
T ss_pred EECCEEEEEEecCcccccccC-CCCccccCCEEEEEEe
Confidence 999999999998755333222 2234566677888865
No 42
>4b1m_A Levanase; hydrolase, CBM66; HET: FRU; 1.10A {Bacillus subtilis} PDB: 4b1l_A* 4azz_A
Probab=96.74 E-value=0.03 Score=44.29 Aligned_cols=85 Identities=12% Similarity=0.088 Sum_probs=55.6
Q ss_pred eEEEEEEEEEeCC-----CCeEEEEeccCCCCCCCeEEEEEeC--CEEEEEEECCCceEEEE-ecCCCCCCCeEEEEEEE
Q psy5026 166 SLLDLTIVFKAIE-----PNGILLYNGHRADGVGDFIALYLND--RYVDFTFDLGTGAATLR-SSNPISLGEWRKLRLTR 237 (293)
Q Consensus 166 ~~~~i~~~frt~~-----~~GlLl~~~~~~~~~~~~l~l~l~~--g~v~~~~~~g~~~~~~~-~~~~~~dg~wh~V~i~r 237 (293)
..+.++++++... ..||+|...... ..+..+.+.. +++.+.-..++....+. .+..+..|+||++.|..
T Consensus 64 ~Df~le~dvk~~~~~~~g~~Gi~fR~~~d~---~~gY~~~i~~~~~~~~l~k~~~g~~~~L~~~~~~~~~g~w~~l~I~~ 140 (185)
T 4b1m_A 64 SDFTYESDITIKDGNGRGAGALMFRSDKDA---KNGYLANVDAKHDLVKFFKFENGAASVIAEYKTPIDVNKKYHLKTEA 140 (185)
T ss_dssp SSEEEEEEEEEEEEEEEEEEEEEEEECTTS---SSEEEEEEETTTTEEEEEEEETTEEEEEEEEECCCCSSCCEEEEEEE
T ss_pred cCEEEEEEEEEcCCCCcceEEEEEEEcCCC---CCcEEEEEECCCCEEEEEEEeCCcEEEeeeccccCCCCCeEEEEEEE
Confidence 3456666666543 347777763222 5677777764 56665433333222333 24578889999999999
Q ss_pred eCCEEEEEECCcccee
Q psy5026 238 TGRHAYLQVDRFPSSQ 253 (293)
Q Consensus 238 ~~~~~~l~VD~~~~~~ 253 (293)
.++.+++.|||.....
T Consensus 141 ~G~~i~~~vnG~~v~~ 156 (185)
T 4b1m_A 141 EGDRFKIYLDDRLVID 156 (185)
T ss_dssp ETTEEEEEETTEEEEE
T ss_pred ECCEEEEEECCEEEEE
Confidence 9999999999985543
No 43
>4dqa_A Uncharacterized protein; two domains structure, DUF 1735, laminin_G_3 concanavalin A- lectin/glucanases superfamily domain; HET: MSE; 1.50A {Bacteroides ovatus}
Probab=96.74 E-value=0.021 Score=50.08 Aligned_cols=112 Identities=12% Similarity=0.097 Sum_probs=67.4
Q ss_pred ceeEecCCccceeeEEEEEEEEEeCCC--CeEEEEeccCCCCCCCeEEEEEe--------CCEEEEEEECCCceEEEEec
Q psy5026 153 PDQVYQGLGEQYLSLLDLTIVFKAIEP--NGILLYNGHRADGVGDFIALYLN--------DRYVDFTFDLGTGAATLRSS 222 (293)
Q Consensus 153 s~~~~~~~~~~~~~~~~i~~~frt~~~--~GlLl~~~~~~~~~~~~l~l~l~--------~g~v~~~~~~g~~~~~~~~~ 222 (293)
+|+..+.........+++++.+|...- ...||- . ...+.+.+. .+++.+. .+ + .+.+.
T Consensus 148 ~~~~~~~~~~~~~~~~T~eawv~~~~~~~~~ti~g--~-----e~~~~lr~gd~~~g~~~~~~Lq~~--~~-~--~~~s~ 215 (355)
T 4dqa_A 148 HYISVKFPVGTFFSSFTYEALINVDYFLDNNTIMG--T-----EGVMILRIGDAGGGITPKDYLEVA--GG-Q--NYRVT 215 (355)
T ss_dssp CCEEECCCTTCCBSSEEEEEEEEESCCCSSEEEEE--E-----TTTEEEEEEEGGGTSEEEEEEEEE--ES-S--CEECS
T ss_pred CEEEcccCCCCCCCcEEEEEEEECCcCCCcceEEe--C-----CCeEEEEEecCCCCCCcCCeEEEe--cC-C--ccccC
Confidence 455544222223467899999987643 445542 1 123444552 3445553 22 2 34456
Q ss_pred CCCCCCCeEEEEEEEe--CCEEEEEECCccceeEecCCCcccccCCCCeEEeccCC
Q psy5026 223 NPISLGEWRKLRLTRT--GRHAYLQVDRFPSSQILSPGPFTQLSLSLSLYLGGVPD 276 (293)
Q Consensus 223 ~~~~dg~wh~V~i~r~--~~~~~l~VD~~~~~~~~~~~~~~~l~~~~~lyvGG~p~ 276 (293)
..+.+|+||+|.+.++ ++.++|.|||..............+.....++||....
T Consensus 216 ~~l~~g~W~HvA~t~d~~~~~~~lYvNG~~~~~~~~~~~~~~~~~~~~l~IG~~~~ 271 (355)
T 4dqa_A 216 KPLLTNRWYHVALTYDQPTGKTGIYVNGEKWAGSDWGIDGFDPNSDMGFYIGRIYG 271 (355)
T ss_dssp SCCCSSCEEEEEEEEETTTTEEEEEETTEEEEEEECCCCCBCTTSTTCEEESCCTT
T ss_pred CcccCCCEEEEEEEEECCCCEEEEEECCEEEEEEecCCCccccCCCceEEECCCCC
Confidence 6899999999999999 88999999998664443322222222235799997543
No 44
>2v73_A CBM40, putative EXO-alpha-sialidase; carbohydrate-binding module, bacterial pathogen, sialic acid, sugar-binding protein; HET: SIA; 2.2A {Clostridium perfringens}
Probab=96.42 E-value=0.11 Score=40.88 Aligned_cols=110 Identities=15% Similarity=0.204 Sum_probs=74.0
Q ss_pred ceeEEEEEEEeCCCCe-EEEEeccCCCCCCCeEEEEEECCEEEEEEeC------------------CCCCCeEEEEec-c
Q psy5026 6 QAWRFPIQFKPESWDG-ILFLTGERDDLNGDFMTLLIFEGYVEFSTPY------------------RPYADITVHRTV-R 65 (293)
Q Consensus 6 ~~~~i~~~FrT~~~~G-lL~~~~~~~~~~~~~~~l~l~~G~l~~~~~~------------------g~w~~~~~~~~~-~ 65 (293)
....|.|+||+..+.. -||-..+. .....|+.+.|.+|.+.+++.. ++||.+.+.... .
T Consensus 40 ~~gTI~v~fks~~~~~q~LfSIsN~-k~~n~yf~lyi~~g~lg~e~R~~~~~~~~~~~~~a~v~~~~~wntvaf~~d~~~ 118 (191)
T 2v73_A 40 EEGTIVTRFNMNDTSIQSLIGLSDG-NKANNYFSLYVSGGKVGYELRRQEGNGDFNVHHSADVTFNRGINTLALKIEKGI 118 (191)
T ss_dssp SSEEEEEEEEECCCSCEEEEEEECT-TCSSCEEEEEECSSEEEEEEEECTTSSCEEEEEEEECCCCSSCEEEEEEEETTT
T ss_pred CCcEEEEEEecCCCcceEEEEccCC-CCccceEEEEEeCCEEEEEEecCCCceeeeeecccceecCCceEEEEEEEcCCc
Confidence 4567889999987432 45555543 3467899999999999886644 268888875543 4
Q ss_pred EEEecccCC-------C--CceeeeecCCceEEcCCCCCCCCCCCCCcccCceeeEEEEEEcCeee
Q psy5026 66 TLILPYTVP-------S--GLFSRITFREPVFVGGRGNTSGLSDKLPTEKGFKGCIRHLDINDHLY 122 (293)
Q Consensus 66 ~v~l~~~g~-------~--~~~~~l~~~~~l~iGG~p~~~~~~~~~~~~~~F~GCi~~~~~n~~~~ 122 (293)
.+.|-.+|. . +-...+++ ..+.|||...... ...-+|.|-|+++.+-++.+
T Consensus 119 ~~~ly~NG~~V~t~~~~~~~fi~~i~l-n~~~IG~~~r~sg-----~~~y~F~G~Id~~~iYn~aL 178 (191)
T 2v73_A 119 GAKIFLNGSLVKTVSDPNIKFLNAINL-NSGFIGKTDRANG-----YNEYLFRGNIDFMNIYDKPV 178 (191)
T ss_dssp EEEEEETTEEEEEEECTTCCCGGGSCC-CEEEESSCCCCSS-----SCCCCCCEEEEEEEEESSCC
T ss_pred cEEEEECCEEEEEEecccccceeecCC-ceEEEcceeecCC-----ceeeccCCeEEEEEEEcCcC
Confidence 666655542 1 11223344 5899999866421 12468999999999977655
No 45
>2sli_A Intramolecular trans-sialidase; hydrolase, neuraminidase; HET: SKD; 1.80A {Macrobdella decora} SCOP: b.29.1.9 b.68.1.1 PDB: 1sll_A 1sli_A* 3sli_A* 4sli_A*
Probab=95.48 E-value=0.41 Score=45.61 Aligned_cols=109 Identities=15% Similarity=0.242 Sum_probs=69.2
Q ss_pred eEEEEEEEEEeCCCC--eEEEEeccCCCC-CCCeEEEEEe-CCEEEEEEECCCc--eEEEEecCCCC---CC--CeEEEE
Q psy5026 166 SLLDLTIVFKAIEPN--GILLYNGHRADG-VGDFIALYLN-DRYVDFTFDLGTG--AATLRSSNPIS---LG--EWRKLR 234 (293)
Q Consensus 166 ~~~~i~~~frt~~~~--GlLl~~~~~~~~-~~~~l~l~l~-~g~v~~~~~~g~~--~~~~~~~~~~~---dg--~wh~V~ 234 (293)
..++|.+.||+...+ ..||.+.+...+ ...|+.++|. +|++.+.+....+ ...+..+..+. .| .||+|.
T Consensus 35 ~~~Ti~~~~~~~~~~~~~~lfs~s~~~~~~~~~~~~~~i~~~g~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~va 114 (679)
T 2sli_A 35 TQGTIILSYKSTSENGIQSLFSVGNSTAGNQDRHFHIYITNSGGIGIELRNTDGVFNYTLDRPASVRALYKGERVFNTVA 114 (679)
T ss_dssp SSEEEEEEEEECCCCSEEEEEEEECCSTTCTTEEEEEEEETTSCEEEEEEECTTTCEEEEEESSCCCSEETTEECCEEEE
T ss_pred cCeEEEEEEEcCCCCCceEEEEeecCCccccCcceEEEEcCCCeEEEEEecCCCCeeeecccccccccccCCCceeEEEE
Confidence 467888999987543 466666654310 1479999998 5788777554322 23333333443 25 699999
Q ss_pred EEEe--CCEEEEEECCccceeEecCC-Cc-ccccCCCCeEEecc
Q psy5026 235 LTRT--GRHAYLQVDRFPSSQILSPG-PF-TQLSLSLSLYLGGV 274 (293)
Q Consensus 235 i~r~--~~~~~l~VD~~~~~~~~~~~-~~-~~l~~~~~lyvGG~ 274 (293)
+..+ .+.+.|.|||....+..... .+ ..+.--..+.||+.
T Consensus 115 ~~~~~~~~~~~lyvnG~~v~~~~~~~~~f~~~~~~~~~~~iG~~ 158 (679)
T 2sli_A 115 LKADAANKQCRLFANGELLATLDKDAFKFISDITGVDNVTLGGT 158 (679)
T ss_dssp EEEETTTTEEEEEETTEEEEEEECSSCCCGGGSTTCCEEEESSE
T ss_pred EEEECCCCeEEEEECCEEeEeecccccccccccCCCceEEEeee
Confidence 9998 68999999999765443321 11 12222257889984
No 46
>2jkb_A Sialidase B; intramolecular trans-sialidase, lyase, glycosidase, neuraminidase; HET: SKD; 1.54A {Streptococcus pneumoniae} PDB: 2vw2_A* 2vw1_A* 2vw0_A*
Probab=95.38 E-value=0.5 Score=45.08 Aligned_cols=110 Identities=11% Similarity=0.068 Sum_probs=68.9
Q ss_pred eEEEEEEEEEeCCCC--eEEEEeccCCC-CCCCeEEEEEe-CCEEEEEEECCCc--eEEEEecCCCC---CC--CeEEEE
Q psy5026 166 SLLDLTIVFKAIEPN--GILLYNGHRAD-GVGDFIALYLN-DRYVDFTFDLGTG--AATLRSSNPIS---LG--EWRKLR 234 (293)
Q Consensus 166 ~~~~i~~~frt~~~~--GlLl~~~~~~~-~~~~~l~l~l~-~g~v~~~~~~g~~--~~~~~~~~~~~---dg--~wh~V~ 234 (293)
...+|.+.|++.... -.||.+.+... ....|+.++|. +|++.+.+.-..+ ...+..+..+. .| .||+|.
T Consensus 57 ~~~T~~~~~~~~~~~~~~~lfs~sn~~~~~~~~~~~~~i~~~g~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~va 136 (686)
T 2jkb_A 57 ESQTVVMKFKADKPNSLQALFGLSNSKAGFKNNYFSIFMRDSGEIGVEIRDAQKGINYLFSRPASLWGKHKGQAVENTLV 136 (686)
T ss_dssp SCEEEEEEEECSSCCSEEEEEEEECCSTTCTTCEEEEEEETTSCEEEEEEETTTTEEEEEEESSCCCCEETTEECCEEEE
T ss_pred CceEEEEEEEccCCCCeeEEEEeecCcccccCcceEEEEcCCCeEEEEEecCCCCeeeeccccccccccccCCcceeEEE
Confidence 357888999986533 36666655431 01479999996 8888887664433 22333333444 45 799999
Q ss_pred EEEe--CCEEEEEECCccceeEecCCC-c-ccccCCCCeEEeccC
Q psy5026 235 LTRT--GRHAYLQVDRFPSSQILSPGP-F-TQLSLSLSLYLGGVP 275 (293)
Q Consensus 235 i~r~--~~~~~l~VD~~~~~~~~~~~~-~-~~l~~~~~lyvGG~p 275 (293)
+..+ ++.+.|.|||....+.....- + ..+.--..+-+|++.
T Consensus 137 ~~~d~~~~~~~lyvnG~~v~~~~~~~~~~~~~~~~~~~~~iG~~~ 181 (686)
T 2jkb_A 137 FVSDSKDKTYTMYVNGIEVFSETVDTFLPISNINGIDKATLGAVN 181 (686)
T ss_dssp EEEETTTTEEEEEETTEEEEEEECSSCCCGGGSTTCCEEEESSEE
T ss_pred EEEECCCCeEEEEECCEEEEeecccccceeccCCCcceeeecccc
Confidence 9998 679999999997654432211 1 112111467888753
No 47
>3zr5_A Galactocerebrosidase; hydrolase, GALC, glycosyl hydrolase, krabbe disease, TIM BAR lectin domain; HET: NAG; 2.10A {Mus musculus} PDB: 3zr6_A*
Probab=91.48 E-value=4.9 Score=38.04 Aligned_cols=86 Identities=13% Similarity=0.066 Sum_probs=54.3
Q ss_pred EEEEEEEEEeCC--CCe--EEEEeccCCC--CCCCeEEEEE-eCCEEEEEEECCCceEEEEecCCCCCCCeEEEEEEEeC
Q psy5026 167 LLDLTIVFKAIE--PNG--ILLYNGHRAD--GVGDFIALYL-NDRYVDFTFDLGTGAATLRSSNPISLGEWRKLRLTRTG 239 (293)
Q Consensus 167 ~~~i~~~frt~~--~~G--lLl~~~~~~~--~~~~~l~l~l-~~g~v~~~~~~g~~~~~~~~~~~~~dg~wh~V~i~r~~ 239 (293)
.+.++..++-.. ..+ |++-...... +......+.| .+|+..+.-+.+...+.-.....+..++||++.+...+
T Consensus 530 dytVs~Dv~~~~~~~g~a~i~~Rv~~~g~~~~~~~gy~~~i~~~G~~~l~~~~~~~~vLa~g~~~~~~~~w~~L~l~~~G 609 (656)
T 3zr5_A 530 NMTVQCDVYIETPRSGGVFIAGRVNKGGILIRSATGVFFWIFANGSYRVTADLGGWITYASGHADVTAKRWYTLTLGIKG 609 (656)
T ss_dssp EEEEEEEEEECSTTTCEEEEEEEECCCGGGGGGCEEEEEEEETTTEEEEEEETTCCSEEEEEECSCCTTCEEEEEEEEET
T ss_pred cEEEEEEEEeccCCCCcEEEEEEEcCCCCCccccceEEEEEEcCCEEEEEEecCCeEEEEEEEecCCCCceEEEEEEEEC
Confidence 466776666544 334 3333322110 0012345555 49999998766543322223457899999999999999
Q ss_pred CEEEEEECCccce
Q psy5026 240 RHAYLQVDRFPSS 252 (293)
Q Consensus 240 ~~~~l~VD~~~~~ 252 (293)
..+...|||....
T Consensus 610 ~~i~~~ldG~~v~ 622 (656)
T 3zr5_A 610 YFAFGMLNGTILW 622 (656)
T ss_dssp TEEEEEETTEEEE
T ss_pred CEEEEEECCEEEE
Confidence 9999999997553
No 48
>1za4_A Thrombospondin 1; TSP-1, NTSP-1, HBD, arixtra, cell adhesion; HET: SGN; 1.90A {Homo sapiens} SCOP: b.29.1.4 PDB: 2ouh_A 2ouj_A
Probab=91.13 E-value=3.6 Score=33.90 Aligned_cols=102 Identities=13% Similarity=0.219 Sum_probs=61.4
Q ss_pred ceeEEEEEEEe-CCCCeEEEEeccCCCCCCCeEEEEEEC--CEEEEEE----------------eCCCCCCeEEEEeccE
Q psy5026 6 QAWRFPIQFKP-ESWDGILFLTGERDDLNGDFMTLLIFE--GYVEFST----------------PYRPYADITVHRTVRT 66 (293)
Q Consensus 6 ~~~~i~~~FrT-~~~~GlL~~~~~~~~~~~~~~~l~l~~--G~l~~~~----------------~~g~w~~~~~~~~~~~ 66 (293)
..|.|...||. ....|.||...+.. ....++.|.+.. ..|.+.+ .+|+||.+.+.-....
T Consensus 72 ~eFsil~tlr~~~~~~g~LfsI~~~~-g~~~ql~l~~~G~~~~l~~~Y~~~g~~~~~~f~~~~L~Dg~WH~lalsV~~~~ 150 (251)
T 1za4_A 72 KGFLLLASLRQMKKTRGTLLALERKD-HSGQVFSVVSNGKAGTLDLSLTVQGKQHVVSVEEALLATGQWKSITLFVQEDR 150 (251)
T ss_dssp TEEEEEEEEEECTTCEEEEEEEEETT-SSCEEEEEEEETTTTEEEEEEEETTEEEEEEESSCCCCSSSCEEEEEEEETTE
T ss_pred CcEEEEEEEEecCCCCeEEEEEEeCC-CCEEEEEEEECCCCcEEEEEEEcCCCeeeEEEecccccCCCEEEEEEEEECCE
Confidence 67888899996 56677888655543 112355554422 2444433 2468999999888888
Q ss_pred EEecccCCC-------C-ceee----eecCCceEEcCCCCCCCCCCCCCcccCceeeEEEEEEc
Q psy5026 67 LILPYTVPS-------G-LFSR----ITFREPVFVGGRGNTSGLSDKLPTEKGFKGCIRHLDIN 118 (293)
Q Consensus 67 v~l~~~g~~-------~-~~~~----l~~~~~l~iGG~p~~~~~~~~~~~~~~F~GCi~~~~~n 118 (293)
|.|-.+-.. . .... +.....++||-.... .. |.|-|+++.+-
T Consensus 151 VtLyvDC~~~~~~~l~~~~~~i~~~~~~~~~~~~iGq~~~~---------~~-F~G~lq~l~i~ 204 (251)
T 1za4_A 151 AQLYIDCEKMENAELDVPIQSVFTRDLASIARLRIAKGGVN---------DN-FQGVLQNVRFV 204 (251)
T ss_dssp EEEEETTSCCEEEECSSCGGGTSCTTGGGTEEEEESCCSTT---------CB-CCEEEEEEEEE
T ss_pred EEEEECCcccceeeccCccccccccccCCCcEEEEEecCCC---------CC-CeEEeEEEEEE
Confidence 887443321 1 1011 111446788865321 24 99999999873
No 49
>3pvn_A C-reactive protein; pentraxin family, immune system; 1.98A {Homo sapiens} SCOP: b.29.1.5 PDB: 1gnh_A 1lj7_A 3l2y_A 1b09_A 3pvo_A
Probab=90.42 E-value=5.3 Score=31.67 Aligned_cols=114 Identities=10% Similarity=0.106 Sum_probs=64.3
Q ss_pred CceeEEEEEEEeCC---CCeEEEEeccCCCCCCCeEEEEEE-CCEEEEEE-----------eCCCCCCeEEEEec--cEE
Q psy5026 5 PQAWRFPIQFKPES---WDGILFLTGERDDLNGDFMTLLIF-EGYVEFST-----------PYRPYADITVHRTV--RTL 67 (293)
Q Consensus 5 ~~~~~i~~~FrT~~---~~GlL~~~~~~~~~~~~~~~l~l~-~G~l~~~~-----------~~g~w~~~~~~~~~--~~v 67 (293)
-+.+.+++.++|.. .++.||-.+... ..+-+.|... +|.+.+.+ ..|+||.+.+.... ..+
T Consensus 30 l~~fTvc~wv~~~~~~~~~~~lfSy~~~~--~~n~l~l~~~~~g~~~l~i~g~~~~~~~~~~~g~W~Hv~~twd~~~G~~ 107 (206)
T 3pvn_A 30 LKAFTVCLHFYTELSSTRGYSIFSYATKR--QDNEILIFWSKDIGYSFTVGGSEILFEVPEVTVAPVHICTSWESASGIV 107 (206)
T ss_dssp BSEEEEEEEEEESGGGTCCEEEEEEEETT--EEEEEEEEEETTTEEEEEETTEEEEEECSSCCSSCEEEEEEEETTTCEE
T ss_pred cCCEEEEEEEEecCCCCCcEEEEEEEcCC--CCCEEEEEEcCCCeEEEEECCeEEEEeccCCCCceEEEEEEEECCCCeE
Confidence 35688999999865 477777444321 1122333332 34444433 34689999887654 366
Q ss_pred EecccCCCCcee------eeecCCceEEcCCCCCCCCCCCCCcccCceeeEEEEEEcCeee
Q psy5026 68 ILPYTVPSGLFS------RITFREPVFVGGRGNTSGLSDKLPTEKGFKGCIRHLDINDHLY 122 (293)
Q Consensus 68 ~l~~~g~~~~~~------~l~~~~~l~iGG~p~~~~~~~~~~~~~~F~GCi~~~~~n~~~~ 122 (293)
.+-.+|...... .+.....+.||.-..... ........|.|.|.++.+=++.+
T Consensus 108 ~lyvdG~~~~~~~~~~g~~i~~~g~l~lGq~qd~~g--g~f~~~~~f~G~i~~v~iw~~aL 166 (206)
T 3pvn_A 108 EFWVDGKPRVRKSLKKGYTVGAEASIILGQEQDSFG--GNFEGSQSLVGDIGNVNMWDFVL 166 (206)
T ss_dssp EEEETTEECCCEECCTTCCBCSSCEEEESSCCSBTT--BCCCGGGCCCEEEEEEEEESSCC
T ss_pred EEEECCEEcccccccCCcEECCCCEEEEccccccCC--CCcCCccceEEEEeeEEEECccC
Confidence 776666321111 234456788885532211 11223478999999999855533
No 50
>1a8d_A Tetanus neurotoxin; clostridial, ganglioside binding region; 1.57A {Clostridium tetani} SCOP: b.29.1.6 b.42.4.2 PDB: 1af9_A 1fv3_A* 1fv2_A* 3hmy_A* 3hn1_A* 1d0h_A* 1dfq_A* 1dll_A* 1yxw_A* 1yyn_A* 1diw_A*
Probab=89.08 E-value=12 Score=33.28 Aligned_cols=110 Identities=10% Similarity=0.136 Sum_probs=67.3
Q ss_pred eEEEEEEEEEeCCC---------Ce--EEEEec-cCCCCCCCeEEEEEeCCEEEEEEECCCce-E--EEE-ecCCCC---
Q psy5026 166 SLLDLTIVFKAIEP---------NG--ILLYNG-HRADGVGDFIALYLNDRYVDFTFDLGTGA-A--TLR-SSNPIS--- 226 (293)
Q Consensus 166 ~~~~i~~~frt~~~---------~G--lLl~~~-~~~~~~~~~l~l~l~~g~v~~~~~~g~~~-~--~~~-~~~~~~--- 226 (293)
..++|+|.+|+... ++ .|+-.. ........-+.+.+.+..+.+.+....+. . .++ .+..+.
T Consensus 85 ~dFSISFWvK~~k~~~~~i~~~~~~e~TIin~k~~n~~s~nsGW~I~l~gn~liw~l~Dsng~~~~i~f~~~~~~Isd~~ 164 (452)
T 1a8d_A 85 NNFTVSFWLRVPKVSASHLEQYGTNEYSIISSMKKHSLSIGSGWSVSLKGNNLIWTLKDSAGEVRQITFRDLPDKFNAYL 164 (452)
T ss_dssp SCEEEEEEEECCCCCHHHHHHHTTCEEEEEECCEECGGGCEEEEEEEEETTEEEEEEECTTSCEEEEEEECCSBTTSCSS
T ss_pred CceEEEEEEECCCcCcccccccccCcceEEeeeccccccCCCCeEEEeCCCeEEEEEEcCCCceeeEEeccccccCcccc
Confidence 37999999998764 22 444222 11000012477788888999988765433 2 333 233344
Q ss_pred CCCeEEEEEEEe-CCEEEEEECCccceeEecCCCcccccCCCCeEEe--ccCC
Q psy5026 227 LGEWRKLRLTRT-GRHAYLQVDRFPSSQILSPGPFTQLSLSLSLYLG--GVPD 276 (293)
Q Consensus 227 dg~wh~V~i~r~-~~~~~l~VD~~~~~~~~~~~~~~~l~~~~~lyvG--G~p~ 276 (293)
+|+||+|+++.+ .+...+-+||....+.... ....+.....+-+| +.++
T Consensus 165 ~nkW~fVtItvDR~g~~~IYING~Lv~s~~It-~lG~I~ss~~i~~gi~~~~d 216 (452)
T 1a8d_A 165 ANKWVFITITNDRLSSANLYINGVLMGSAEIT-GLGAIREDNNITLKLDRCNN 216 (452)
T ss_dssp SSSCEEEEEEECTTSEEEEEETTEEEEEEECT-TCCCCCCCSEEEEEEESCCC
T ss_pred CCeEEEEEEEECCCCCEEEEECCEEeeccchh-hccceeecCeEEEEEcccCC
Confidence 699999999998 5667999999866544333 22244445555555 6665
No 51
>4azz_A Levanase; hydrolase; 1.70A {Bacillus subtilis}
Probab=88.54 E-value=0.079 Score=41.13 Aligned_cols=82 Identities=12% Similarity=0.153 Sum_probs=48.5
Q ss_pred EEEEEEEEEeC-----CCCeEEEEeccCCCCCCCeEEEEEe--CCEEEEE-EECCCceEEEEecCCCCCCCeEEEEEEEe
Q psy5026 167 LLDLTIVFKAI-----EPNGILLYNGHRADGVGDFIALYLN--DRYVDFT-FDLGTGAATLRSSNPISLGEWRKLRLTRT 238 (293)
Q Consensus 167 ~~~i~~~frt~-----~~~GlLl~~~~~~~~~~~~l~l~l~--~g~v~~~-~~~g~~~~~~~~~~~~~dg~wh~V~i~r~ 238 (293)
.+.++++++.. ...|++|...... ..+..+.+. ++++.+. +..|..........++..|+||++.|...
T Consensus 44 df~le~~v~~~~~~~~~~~Gi~fR~~~d~---~~~Y~~~i~~~~~~~~l~~~~~G~~~~l~~~~~~~~~g~w~~l~I~~~ 120 (172)
T 4azz_A 44 DFTYESDITIKDGNGRGAGALMFRSDKDA---KNGYLANVDAKHDLVKFFKFENGAASVIAEYKTPIDVNKKYHLKTEAE 120 (172)
Confidence 45555555533 3446777653322 345555553 3445442 22222111122345678899999999999
Q ss_pred CCEEEEEECCccc
Q psy5026 239 GRHAYLQVDRFPS 251 (293)
Q Consensus 239 ~~~~~l~VD~~~~ 251 (293)
++.+++.|||...
T Consensus 121 G~~i~~~vnG~~v 133 (172)
T 4azz_A 121 GDRFKIYLDDRLV 133 (172)
Confidence 9999999999754
No 52
>2erf_A Thrombospondin-1; TSP-1, N-terminal TSPN, HBD, sugar binding protein; 1.45A {Homo sapiens} SCOP: b.29.1.4 PDB: 2es3_A 1z78_A
Probab=87.96 E-value=5.9 Score=31.50 Aligned_cols=101 Identities=12% Similarity=0.198 Sum_probs=62.3
Q ss_pred ceeEEEEEEEe-CCCCeEEEEeccCCCCCCCeEEEEEECC--EEEEEE----------------eCCCCCCeEEEEeccE
Q psy5026 6 QAWRFPIQFKP-ESWDGILFLTGERDDLNGDFMTLLIFEG--YVEFST----------------PYRPYADITVHRTVRT 66 (293)
Q Consensus 6 ~~~~i~~~FrT-~~~~GlL~~~~~~~~~~~~~~~l~l~~G--~l~~~~----------------~~g~w~~~~~~~~~~~ 66 (293)
..+.|.+.||. ....|.||-..+.. ....++.|.+... .+.+.+ .+|+||.+.+.-....
T Consensus 62 ~eFsi~~t~r~~~~~~~~LfsI~~~~-~~~~ql~l~l~g~~~~l~~~y~~~g~~~~~~f~~v~l~dg~WH~l~l~V~~~~ 140 (209)
T 2erf_A 62 KGFLLLASLRQMKKTRGTLLALERKD-HSGQVFSVVSNGKAGTLDLSLTVQGKQHVVSVEEALLATGQWKSITLFVQEDR 140 (209)
T ss_dssp TEEEEEEEEEECTTCEEEEEEEEETT-SSCEEEEEEEETTTTEEEEEEEETTEEEEEEESSCCCCSSSEEEEEEEEETTE
T ss_pred CCEEEEEEEEcCCCCCceEEEEEcCC-CCEEEEEEEEcCCCCEEEEEEcCCCCEEEEEEeccccCCCcEEEEEEEEECCE
Confidence 67888999995 67778888555442 1145777777432 344422 3568999999888888
Q ss_pred EEecccCC-------CC-ceeee----ecCCceEEcCCCCCCCCCCCCCcccCceeeEEEEEE
Q psy5026 67 LILPYTVP-------SG-LFSRI----TFREPVFVGGRGNTSGLSDKLPTEKGFKGCIRHLDI 117 (293)
Q Consensus 67 v~l~~~g~-------~~-~~~~l----~~~~~l~iGG~p~~~~~~~~~~~~~~F~GCi~~~~~ 117 (293)
|.|..+-. .. ....+ +....++||-.... .. |.|-|+++.+
T Consensus 141 v~L~vDC~~~~~~~l~~~~~~~~~~~~~~~~~~~iGq~~~~---------~~-F~G~lq~l~i 193 (209)
T 2erf_A 141 AQLYIDCEKMENAELDVPIQSVFTRDLASIARLRIAKGGVN---------DN-FQGVLQNVRF 193 (209)
T ss_dssp EEEEETTTEEEEEECSSCGGGTCCTTHHHHEEEEESCCTTT---------CB-CCEEEEEEEE
T ss_pred EEEEEcCeEeEeEEccCCchhccccccCCceEEEEecCCCC---------CC-CeEEeEEEEE
Confidence 87743321 01 11111 11347888866331 24 9999999987
No 53
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=85.61 E-value=0.1 Score=46.76 Aligned_cols=44 Identities=14% Similarity=0.166 Sum_probs=35.3
Q ss_pred CCCCeEEEEeccCCCCCCCeEEEEEeCCEEEEEEECCCceEEEEec
Q psy5026 177 IEPNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAATLRSS 222 (293)
Q Consensus 177 ~~~~GlLl~~~~~~~~~~~~l~l~l~~g~v~~~~~~g~~~~~~~~~ 222 (293)
.+.+|++++...... .+|++|+|.+|++.+++++|.....+++.
T Consensus 364 ~~~~G~cl~~~~~~~--~d~ial~l~~G~v~~syd~G~~~~~v~t~ 407 (423)
T 2gy5_A 364 VKPDGTVLHPKDFNH--TDHFSVAIFTIHRILPPDSGVWVCSVNTV 407 (423)
T ss_dssp ECTTSCEECCSEEEE--CSSCEEEECCEEEECGGGCEEEEEEEEET
T ss_pred ECCCeEEEeCCCcCc--ccceeeeEEeeeEEEeecCCCcceEEEec
Confidence 467899999865433 78999999999999999998776666543
No 54
>2uur_A Collagen alpha-1(IX) chain; glycoprotein, hydroxylation, structural protein, NC4, collagen IX, polymorphism, extracellular matrix; 1.8A {Homo sapiens}
Probab=84.87 E-value=9.9 Score=31.07 Aligned_cols=108 Identities=12% Similarity=0.079 Sum_probs=64.2
Q ss_pred CCCceeEEEEEEE-eCCCCe---EEEEeccCCCCCCCeEEEEEEC--CEEEE------------EE------eCCCCCCe
Q psy5026 3 GSPQAWRFPIQFK-PESWDG---ILFLTGERDDLNGDFMTLLIFE--GYVEF------------ST------PYRPYADI 58 (293)
Q Consensus 3 ~~~~~~~i~~~Fr-T~~~~G---lL~~~~~~~~~~~~~~~l~l~~--G~l~~------------~~------~~g~w~~~ 58 (293)
+.++.+.|.+.|| .....+ .||-..+++ +..++.|.+.. ..+.+ .| .+|+||.+
T Consensus 83 glp~eFsil~tlr~~~~~~~~~~~L~sI~d~~--~~~qlgv~l~g~~~~l~~~y~~~~g~~q~v~F~~~~~L~Dg~WHkl 160 (245)
T 2uur_A 83 GLPEEYSFLTTFRMTGSTLKKNWNIWQIQDSS--GKEQVGIKINGQTQSVVFSYKGLDGSLQTAAFSNLSSLFDSQWHKI 160 (245)
T ss_dssp CCCSSEEEEEEEECCGGGGGCEEEEEEEECTT--SCEEEEEEEEGGGTEEEEEEEBTTSCEEEEEECCCGGGCSSSCEEE
T ss_pred cCCCCEEEEEEEEcCCCCCCcceEEEEEECCC--CcEEEEEEEcCCCCEEEEEecCCCCCeeEEEecCCccccCCCEEEE
Confidence 3567888999999 444433 467665543 34577777752 22333 22 34799999
Q ss_pred EEEEeccEEEecccCC------CCceeeeecCCceEEcCCCCCCCCCCCCCcccCceeeEEEEEEcCe
Q psy5026 59 TVHRTVRTLILPYTVP------SGLFSRITFREPVFVGGRGNTSGLSDKLPTEKGFKGCIRHLDINDH 120 (293)
Q Consensus 59 ~~~~~~~~v~l~~~g~------~~~~~~l~~~~~l~iGG~p~~~~~~~~~~~~~~F~GCi~~~~~n~~ 120 (293)
.+.-....|.|..+=. -.....++.++.++||-.... ....|.|=|+++.|--.
T Consensus 161 alsV~~~~VtLyvDC~~~~~~~l~~~~~i~~~G~~~lG~~~~~--------~~~~f~g~lQ~l~i~~d 220 (245)
T 2uur_A 161 MIGVERSSATLFVDCNRIESLPIKPRGPIDIDGFAVLGKLADN--------PQVSVPFELQWMLIHCD 220 (245)
T ss_dssp EEEEETTEEEEEETTEEEEEEECCCBCCCCCSSEEEEEEESSC--------TTCBCCEEEEEEEEESC
T ss_pred EEEEECCEEEEEEecCcccccccCCCCccccCCEEEEEEecCC--------CCCceEEEeEEEEEEcC
Confidence 9987788777732110 011133456677777755211 01379999999887433
No 55
>3kqr_A Serum amyloid P-component; glycoprotein, disulfide bond, lectin, metal-binding secreted; HET: NAG; 1.50A {Homo sapiens} SCOP: b.29.1.5 PDB: 1lgn_A* 1gyk_A 2a3w_A* 2a3x_A* 2a3y_A* 1sac_A* 3d5o_A* 2w08_A*
Probab=83.75 E-value=14 Score=29.08 Aligned_cols=114 Identities=12% Similarity=0.090 Sum_probs=63.9
Q ss_pred CceeEEEEEEEeCC-CCeEEEEeccCCCCCCCeEEEEE-ECCEEEEE-----------EeCCCCCCeEEEEec--cEEEe
Q psy5026 5 PQAWRFPIQFKPES-WDGILFLTGERDDLNGDFMTLLI-FEGYVEFS-----------TPYRPYADITVHRTV--RTLIL 69 (293)
Q Consensus 5 ~~~~~i~~~FrT~~-~~GlL~~~~~~~~~~~~~~~l~l-~~G~l~~~-----------~~~g~w~~~~~~~~~--~~v~l 69 (293)
-+.+.+++.++|.. ..+.||-.+... ..+-+.+.. .+|.+.+. +..|+||.+.+.... ..+.+
T Consensus 30 l~~fTvc~wv~~~~~~~~tlfSy~~~~--~~nel~l~~~~~~~~~l~i~g~~~~~~~~~~~g~W~Hv~~twd~~~G~~~l 107 (204)
T 3kqr_A 30 LQNFTLCFRAYSDLSRAYSLFSYNTQG--RDNELLVYKERVGEYSLYIGRHKVTSKVIEKFPAPVHICVSWESSSGIAEF 107 (204)
T ss_dssp BSEEEEEEEEECCCCSCEEEEEEEETT--EEEEEEEEEEETTEEEEEETTEEEEEECCCCSSCCEEEEEEEETTTCEEEE
T ss_pred cCCEEEEEEEEeCCCCCeEEEEEECCC--CCceEEEEEcCCCeEEEEECCeEEEEecccCCCceEEEEEEEECCCCeEEE
Confidence 35788899999864 567777443321 111222222 33444443 345689999887654 36677
Q ss_pred cccCCCCcee------eeecCCceEEcCCCCCCCCCCCCCcccCceeeEEEEEEcCeee
Q psy5026 70 PYTVPSGLFS------RITFREPVFVGGRGNTSGLSDKLPTEKGFKGCIRHLDINDHLY 122 (293)
Q Consensus 70 ~~~g~~~~~~------~l~~~~~l~iGG~p~~~~~~~~~~~~~~F~GCi~~~~~n~~~~ 122 (293)
-.+|...... .+...+.+.||.-..... ........|.|.|.++.+=++.+
T Consensus 108 yvdG~~~~~~~~~~g~~i~~~g~l~lGq~qd~~g--g~f~~~~~f~G~i~~v~iW~~aL 164 (204)
T 3kqr_A 108 WINGTPLVKKGLRQGYFVEAQPKIVLGQEQDSYG--GKFDRSQSFVGEIGDLYMWDSVL 164 (204)
T ss_dssp EETTEECCCEECCTTCCBCSSCEEEESSCCSSSS--CCCCGGGCCCEEEEEEEEESSCC
T ss_pred EECCEEeeeeccCCCCEECCCcEEEEcccccCCC--CCcCcccceeEEEeeEEEECccC
Confidence 6666321111 233456788886543211 11223478999999999855533
No 56
>3flp_A SAP-like pentraxin; physiological doubly-stacked heptamer, pentraxin fold, cyclic heptamer, invertebrate lectin, sugar binding protein; 2.30A {Limulus polyphemus} PDB: 3flr_A 3flt_A
Probab=83.18 E-value=8.6 Score=30.69 Aligned_cols=115 Identities=11% Similarity=0.116 Sum_probs=61.8
Q ss_pred ceeEEEEEEEeC-CCCeEEE-EeccCCC-----------CCCCeEEEEEECCE---EEE--EEeCCCCCCeEEEEec--c
Q psy5026 6 QAWRFPIQFKPE-SWDGILF-LTGERDD-----------LNGDFMTLLIFEGY---VEF--STPYRPYADITVHRTV--R 65 (293)
Q Consensus 6 ~~~~i~~~FrT~-~~~GlL~-~~~~~~~-----------~~~~~~~l~l~~G~---l~~--~~~~g~w~~~~~~~~~--~ 65 (293)
..+.+++.+|+. ..++.|| |..+..+ .....+.+.+.++. +.+ .+..|+||.+.+.... .
T Consensus 32 ~~fTvc~wv~~~~~~~~~lfSy~~~~~~n~l~l~~~~~~~g~~~~~l~i~g~~~~~~~~~~~~~~g~W~Hv~~t~d~~~G 111 (217)
T 3flp_A 32 RQLTVCQRIKPFHRNTGYIFSCATSNQDNQFITSMYVKSDGTLNLGLQVNASSNKYISCPIEIELGQWYHVCHVWSGVDG 111 (217)
T ss_dssp SEEEEEEEEEESCSSCEEEEEEEETTEEEEEEEEEEECTTSEEEEEEEETTCCCEEEEEEEECCTTSCEEEEEEEETTTT
T ss_pred ccEEEEEEEEecCCCCeeEEEEECCCCCceEEEEEeCCCCcceEEEEEECCccceeEEcccccCCCCEEEEEEEEECCCC
Confidence 467888888843 3456666 3332110 01112344443333 222 3456789998887654 3
Q ss_pred EEEecccCCCC-------ceeeeecCCceEEcCCCCCCCCCCCCCcccCceeeEEEEEEcCeee
Q psy5026 66 TLILPYTVPSG-------LFSRITFREPVFVGGRGNTSGLSDKLPTEKGFKGCIRHLDINDHLY 122 (293)
Q Consensus 66 ~v~l~~~g~~~-------~~~~l~~~~~l~iGG~p~~~~~~~~~~~~~~F~GCi~~~~~n~~~~ 122 (293)
.+.+-.+|... ....+...+.+.||.-..... ........|.|.|.++++=++.+
T Consensus 112 ~~~lYvdG~~~~~~~~~~~g~~i~~~g~l~lG~~~~~~g--g~f~~~~~f~G~i~~v~iw~~aL 173 (217)
T 3flp_A 112 RMAVYANGSPCGTMENVGKGHQISAGGTVVIGQEQDKIG--GGFEEQESWSGELSDLQVWDEAL 173 (217)
T ss_dssp EEEEEETTEEEEEESCSSTTCCBCSCBEEEESSCCSBTT--BCCCGGGCCCEEEEEEEEESSCC
T ss_pred EEEEEECCEEecceeccccCcEECCCCEEEeCCcccCCC--CccCCCCceEEEEeeEEEECccC
Confidence 56666555311 011234456788887543211 11223478999999999855533
No 57
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=79.94 E-value=0.16 Score=45.52 Aligned_cols=37 Identities=14% Similarity=0.143 Sum_probs=31.2
Q ss_pred CCCCeEEEEeccCCCCCCCeEEEEEECCEEEEEEeCCCC
Q psy5026 17 ESWDGILFLTGERDDLNGDFMTLLIFEGYVEFSTPYRPY 55 (293)
Q Consensus 17 ~~~~GlL~~~~~~~~~~~~~~~l~l~~G~l~~~~~~g~w 55 (293)
.+++|+++|.++.. ..||++|+|.+|++.+.+++|.|
T Consensus 364 ~~~~G~cl~~~~~~--~~d~ial~l~~G~v~~syd~G~~ 400 (423)
T 2gy5_A 364 VKPDGTVLHPKDFN--HTDHFSVAIFTIHRILPPDSGVW 400 (423)
T ss_dssp ECTTSCEECCSEEE--ECSSCEEEECCEEEECGGGCEEE
T ss_pred ECCCeEEEeCCCcC--cccceeeeEEeeeEEEeecCCCc
Confidence 58899999987532 35899999999999999999944
No 58
>3v0a_B NTNH; botulinum neurotoxin, toxin, neurotoxin associated protein, progenitor toxin complex, VHH bound interlocked complex; HET: MES; 2.70A {Clostridium botulinum} PDB: 3v0b_B
Probab=78.07 E-value=53 Score=32.01 Aligned_cols=85 Identities=11% Similarity=0.155 Sum_probs=57.0
Q ss_pred eEEEEEEEEEeCCCC---eEEEEeccCCCCCCCeEEEEEeCCEEEEEEECCCce-EEEEecCCCCCCCeEEEEEEEe--C
Q psy5026 166 SLLDLTIVFKAIEPN---GILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGA-ATLRSSNPISLGEWRKLRLTRT--G 239 (293)
Q Consensus 166 ~~~~i~~~frt~~~~---GlLl~~~~~~~~~~~~l~l~l~~g~v~~~~~~g~~~-~~~~~~~~~~dg~wh~V~i~r~--~ 239 (293)
..++++|.+|...-+ -.|+-..... .=..+.+.++.+...+....+. ..+-.. .+.+++||.|+++.+ +
T Consensus 902 nnFSISFWVRipk~~~~eyTIIg~~~nN----sGW~ISf~~n~LIWtl~DsnGn~knI~f~-dy~~NkWyfITISvDRLG 976 (1196)
T 3v0a_B 902 NSFSIYFWLRNLGKDTIKSKLIGSKEDN----CGWEIYFQDTGLVFNMIDSNGNEKNIYLS-DVSNNSWHYITISVDRLK 976 (1196)
T ss_dssp CCEEEEEEEEECCCCCSCEEEEEEEETT----EEEEEEEETTEEEEEEECTTCCEEEEEEC-SCCSSSCEEEEEEEETTT
T ss_pred cceEEEEEEEcCCcCCccceEEEeecCC----CCcEEEECCCeEEEEEEcCCCcccceEec-cccCCcEEEEEEEEcCCC
Confidence 378999999975432 3444332221 2277888999999887754443 344433 688899999998887 5
Q ss_pred CEEEEEECCccceeEe
Q psy5026 240 RHAYLQVDRFPSSQIL 255 (293)
Q Consensus 240 ~~~~l~VD~~~~~~~~ 255 (293)
..+.+-|||.......
T Consensus 977 nalkIYINGkLv~~~s 992 (1196)
T 3v0a_B 977 EQLLIFIDDNLVANES 992 (1196)
T ss_dssp TEEEEEETTEEEEEEE
T ss_pred ceeEEEECCEEeechh
Confidence 5669999998664443
No 59
>4dqa_A Uncharacterized protein; two domains structure, DUF 1735, laminin_G_3 concanavalin A- lectin/glucanases superfamily domain; HET: MSE; 1.50A {Bacteroides ovatus}
Probab=76.06 E-value=26 Score=30.21 Aligned_cols=105 Identities=10% Similarity=0.123 Sum_probs=61.9
Q ss_pred CceeEEEEEEEeCCC--CeEEEEeccCCCCCCCeEEEEE--------ECCEEEEE----------EeCCCCCCeEEEEe-
Q psy5026 5 PQAWRFPIQFKPESW--DGILFLTGERDDLNGDFMTLLI--------FEGYVEFS----------TPYRPYADITVHRT- 63 (293)
Q Consensus 5 ~~~~~i~~~FrT~~~--~GlL~~~~~~~~~~~~~~~l~l--------~~G~l~~~----------~~~g~w~~~~~~~~- 63 (293)
-+.+.++..||...- ...|+ +.+ ..+.+.+ ..++|++. +..|+||.+.+...
T Consensus 160 ~~~~T~eawv~~~~~~~~~ti~--g~e-----~~~~lr~gd~~~g~~~~~~Lq~~~~~~~~s~~~l~~g~W~HvA~t~d~ 232 (355)
T 4dqa_A 160 FSSFTYEALINVDYFLDNNTIM--GTE-----GVMILRIGDAGGGITPKDYLEVAGGQNYRVTKPLLTNRWYHVALTYDQ 232 (355)
T ss_dssp BSSEEEEEEEEESCCCSSEEEE--EET-----TTEEEEEEEGGGTSEEEEEEEEEESSCEECSSCCCSSCEEEEEEEEET
T ss_pred CCcEEEEEEEECCcCCCcceEE--eCC-----CeEEEEEecCCCCCCcCCeEEEecCCccccCCcccCCCEEEEEEEEEC
Confidence 456788888887543 44444 221 2334444 33455553 33458999999887
Q ss_pred -ccEEEecccCCCCc-----eeeeec--CCceEEcCCCCCCCCCCCCCcccCceeeEEEEEEcCeee
Q psy5026 64 -VRTLILPYTVPSGL-----FSRITF--REPVFVGGRGNTSGLSDKLPTEKGFKGCIRHLDINDHLY 122 (293)
Q Consensus 64 -~~~v~l~~~g~~~~-----~~~l~~--~~~l~iGG~p~~~~~~~~~~~~~~F~GCi~~~~~n~~~~ 122 (293)
...+.+-.+|.... ...++. ...++||+..... .. ...|.|.|.++++-++.+
T Consensus 233 ~~~~~~lYvNG~~~~~~~~~~~~~~~~~~~~l~IG~~~~~~-----~~-~~~f~G~IdevrIw~~aL 293 (355)
T 4dqa_A 233 PTGKTGIYVNGEKWAGSDWGIDGFDPNSDMGFYIGRIYGFK-----WG-ERPFHGKMSEVRVWSVAR 293 (355)
T ss_dssp TTTEEEEEETTEEEEEEECCCCCBCTTSTTCEEESCCTTCT-----TC-CCCCEEEEEEEEEESSCC
T ss_pred CCCEEEEEECCEEEEEEecCCCccccCCCceEEECCCCCCC-----CC-CcceeEEEEEEEEECCcC
Confidence 66777766663100 011222 3579999864321 11 368999999999976644
No 60
>1dhk_B Bean lectin-like inhibitor, porcine pancreatic alpha-amylase; CO (hydrolase-inhibitor), complex (hydrolase-inhibitor) comple; HET: NAG; 1.85A {Phaseolus vulgaris} SCOP: b.29.1.1 PDB: 1viw_B*
Probab=67.22 E-value=23 Score=28.38 Aligned_cols=70 Identities=9% Similarity=0.053 Sum_probs=43.0
Q ss_pred CCCeEEEEeccCC-CCCCCeEEEEEe--CCEEEEEEECCCceEEEEecCCCCCCCeEEEEEEEeCC--EEEEEECC
Q psy5026 178 EPNGILLYNGHRA-DGVGDFIALYLN--DRYVDFTFDLGTGAATLRSSNPISLGEWRKLRLTRTGR--HAYLQVDR 248 (293)
Q Consensus 178 ~~~GlLl~~~~~~-~~~~~~l~l~l~--~g~v~~~~~~g~~~~~~~~~~~~~dg~wh~V~i~r~~~--~~~l~VD~ 248 (293)
..+|+=|++.... ......++|++. +.|+-+.++.- ..........+.+|+.++|.|.+++. .+.+.++.
T Consensus 78 ~gdGlAF~l~p~~~~p~~~~vAVEFDT~~nHVGIdvNsi-S~~~~~~~~~l~~g~~~~v~I~Yd~~~~~L~V~l~~ 152 (223)
T 1dhk_B 78 SAVGLDFVLVPVQPESKGDTVTVEFDTFLSRISIDVNNN-DIKSVPWDVHDYDGQNAEVRITYNSSTKVFSVSLSN 152 (223)
T ss_dssp CCSEEEEEEEEC------CCEEEEEETTTTEEEEEETTE-EEEEEECCGGGTTTSCEEEEEEEETTTTEEEEEEEC
T ss_pred CCCceEEEEecCCCCCCccEEEEEecCCCCcccccCCcc-ccccccCCccccCCCEEEEEEEEeCCCCEEEEEEec
Confidence 4689999876532 112457888886 56777665432 11111123456689999999999865 66666654
No 61
>4b1m_A Levanase; hydrolase, CBM66; HET: FRU; 1.10A {Bacillus subtilis} PDB: 4b1l_A* 4azz_A
Probab=65.21 E-value=19 Score=27.84 Aligned_cols=42 Identities=12% Similarity=0.180 Sum_probs=25.4
Q ss_pred CCceeEEEEEEEeCCC-----CeEEEEeccCCCCCCCeEEEEEEC--CEEEE
Q psy5026 4 SPQAWRFPIQFKPESW-----DGILFLTGERDDLNGDFMTLLIFE--GYVEF 48 (293)
Q Consensus 4 ~~~~~~i~~~FrT~~~-----~GlL~~~~~~~~~~~~~~~l~l~~--G~l~~ 48 (293)
.+..+.++++|+.... .||+|-... + ..++..+.|.. +.+.+
T Consensus 62 ~~~Df~le~dvk~~~~~~~g~~Gi~fR~~~-d--~~~gY~~~i~~~~~~~~l 110 (185)
T 4b1m_A 62 SGSDFTYESDITIKDGNGRGAGALMFRSDK-D--AKNGYLANVDAKHDLVKF 110 (185)
T ss_dssp EESSEEEEEEEEEEEEEEEEEEEEEEEECT-T--SSSEEEEEEETTTTEEEE
T ss_pred CccCEEEEEEEEEcCCCCcceEEEEEEEcC-C--CCCcEEEEEECCCCEEEE
Confidence 4567888888887553 366665522 1 23677777764 45544
No 62
>3u1x_A Putative glycosyl hydrolase; glycosyl hydrolysis, carbohydrate metabolism,, structural GE joint center for structural genomics, JCSG; HET: MSE PGE; 1.70A {Parabacteroides distasonis}
Probab=60.75 E-value=17 Score=29.52 Aligned_cols=89 Identities=10% Similarity=-0.068 Sum_probs=51.1
Q ss_pred eEEEEEEEEEeC--CCCeEEEEeccCCC---CCCCeEEEEEeCCEEEE------------EEECCCceEE---EEecCCC
Q psy5026 166 SLLDLTIVFKAI--EPNGILLYNGHRAD---GVGDFIALYLNDRYVDF------------TFDLGTGAAT---LRSSNPI 225 (293)
Q Consensus 166 ~~~~i~~~frt~--~~~GlLl~~~~~~~---~~~~~l~l~l~~g~v~~------------~~~~g~~~~~---~~~~~~~ 225 (293)
..|.|+++||.. ..+|+.++...... .-..=..+.|.|+.-.- ....|+ ... .......
T Consensus 79 ~dF~L~lE~k~~~~~NSGI~~~~~~~~~~~~~~~~G~EvQIlD~~~~~~~~~~~~~~~~~~~~~Gs-lY~~~~p~~~~~~ 157 (236)
T 3u1x_A 79 HNFQIKWDWKIGAQGNSGFLYHVQEGPKYKAPFETGPEYQLIDDDNYPWVSETGKEGLEDWQKTGC-NYAMYVPETKQVN 157 (236)
T ss_dssp SSEEEEEEEEECTTCEEEEEEEECCSTTCSCGGGTSCEEEEECTTCCCCBCTTSCBSCCGGGSTTC-BTTTBCCSSCCCC
T ss_pred ccEEEEEEEEeCCCCCcEEEEEecCCccccccccceEEEEEecCCCCCccccccccccCccccccc-cccccCCccccCC
Confidence 467888888865 35678777643210 00011556664432110 000111 111 1112356
Q ss_pred CCCCeEEEEEEEeCCEEEEEECCccceeEe
Q psy5026 226 SLGEWRKLRLTRTGRHAYLQVDRFPSSQIL 255 (293)
Q Consensus 226 ~dg~wh~V~i~r~~~~~~l~VD~~~~~~~~ 255 (293)
..|+|++..|...+.++++.++|.......
T Consensus 158 p~geWN~~~I~~~g~~i~v~lNG~~V~~~~ 187 (236)
T 3u1x_A 158 PPGEWNSSMVLYKDGYVEHWLNGEKLFSFQ 187 (236)
T ss_dssp CTTSCEEEEEEEETTEEEEEETTEEEEEEE
T ss_pred CCCceEEEEEEEECCEEEEEECCEEEEEEe
Confidence 689999999999999999999998665443
No 63
>2sli_A Intramolecular trans-sialidase; hydrolase, neuraminidase; HET: SKD; 1.80A {Macrobdella decora} SCOP: b.29.1.9 b.68.1.1 PDB: 1sll_A 1sli_A* 3sli_A* 4sli_A*
Probab=58.65 E-value=60 Score=30.73 Aligned_cols=112 Identities=17% Similarity=0.185 Sum_probs=64.5
Q ss_pred CceeEEEEEEEeCCCCe--EEEEeccCCC-CCCCeEEEEEEC-CEEEEEEeC--------------------C--CCCCe
Q psy5026 5 PQAWRFPIQFKPESWDG--ILFLTGERDD-LNGDFMTLLIFE-GYVEFSTPY--------------------R--PYADI 58 (293)
Q Consensus 5 ~~~~~i~~~FrT~~~~G--lL~~~~~~~~-~~~~~~~l~l~~-G~l~~~~~~--------------------g--~w~~~ 58 (293)
-..+.|.|.||+...++ .||-..+... ....|+.+.|.+ |.+.+.+.. | .|+.+
T Consensus 34 l~~~Ti~~~~~~~~~~~~~~lfs~s~~~~~~~~~~~~~~i~~~g~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 113 (679)
T 2sli_A 34 MTQGTIILSYKSTSENGIQSLFSVGNSTAGNQDRHFHIYITNSGGIGIELRNTDGVFNYTLDRPASVRALYKGERVFNTV 113 (679)
T ss_dssp CSSEEEEEEEEECCCCSEEEEEEEECCSTTCTTEEEEEEEETTSCEEEEEEECTTTCEEEEEESSCCCSEETTEECCEEE
T ss_pred ccCeEEEEEEEcCCCCCceEEEEeecCCccccCcceEEEEcCCCeEEEEEecCCCCeeeecccccccccccCCCceeEEE
Confidence 46789999999976543 4555544220 124799999974 776555322 2 36666
Q ss_pred EEEEe--ccEEEecccCCC-----Cc-e---eeeecCCceEEcCCCCCCCCCCCCCcccCceeeEEEEEEcCeee
Q psy5026 59 TVHRT--VRTLILPYTVPS-----GL-F---SRITFREPVFVGGRGNTSGLSDKLPTEKGFKGCIRHLDINDHLY 122 (293)
Q Consensus 59 ~~~~~--~~~v~l~~~g~~-----~~-~---~~l~~~~~l~iGG~p~~~~~~~~~~~~~~F~GCi~~~~~n~~~~ 122 (293)
.+... ...+.+-.+|.. +. + ..+.--..+.||+...... . .-+|.|-|+++.|-+..+
T Consensus 114 a~~~~~~~~~~~lyvnG~~v~~~~~~~~~f~~~~~~~~~~~iG~~~~~g~-----~-~~~f~G~i~~~~iy~~~L 182 (679)
T 2sli_A 114 ALKADAANKQCRLFANGELLATLDKDAFKFISDITGVDNVTLGGTKRQGK-----I-AYPFGGTIGDIKVYSNAL 182 (679)
T ss_dssp EEEEETTTTEEEEEETTEEEEEEECSSCCCGGGSTTCCEEEESSEEETTE-----E-ESCCCEEEEEEEEESSCC
T ss_pred EEEEECCCCeEEEEECCEEeEeecccccccccccCCCceEEEeeeecCCc-----e-eccccceEeEEEEeCCCC
Confidence 55444 345666555531 11 1 1122225788998522110 1 126999999999977655
No 64
>3imm_A Putative secreted glycosylhydrolase; YP_001301887.1, putative glycosyl hydrolase; HET: MSE; 2.00A {Parabacteroides distasonis atcc 8503}
Probab=56.98 E-value=25 Score=27.66 Aligned_cols=87 Identities=16% Similarity=0.313 Sum_probs=48.8
Q ss_pred eEEEEEEEEEeC--CCCeEEEEeccCCCCCCCeEEEEEeCCEEE------EEEECCCceEEEE---ecCCC-CCCCeEEE
Q psy5026 166 SLLDLTIVFKAI--EPNGILLYNGHRADGVGDFIALYLNDRYVD------FTFDLGTGAATLR---SSNPI-SLGEWRKL 233 (293)
Q Consensus 166 ~~~~i~~~frt~--~~~GlLl~~~~~~~~~~~~l~l~l~~g~v~------~~~~~g~~~~~~~---~~~~~-~dg~wh~V 233 (293)
..+.|+++||.. ..+|+.+........-..-..+.|.++.-. -.-..|+ ...+. ..... ..|+|++.
T Consensus 47 ~dF~L~~e~k~~~~~NSGI~~r~~~~~~~~~~G~EvQild~~~~~~~~~~~~~~~Gs-lY~~~~~~~~~~~kp~GeWN~~ 125 (201)
T 3imm_A 47 ENFELDLDFKTDVGTNSGVVVYCTDTKDWIPNSVEIQIADDHCEKWGNGKPYEKCGA-IYGHLGAVQDKVVKKPGEWNHM 125 (201)
T ss_dssp CSEEEEEEEEECTTCEEEEEEEESCSSSCTTSSEEEEEECTTCCTTTTCCGGGSTTS-BTTTBCCSSSCCSCCTTSEEEE
T ss_pred ccEEEEEEEEECCCCccEEEEEecCCCCCcCcEEEEEEEcCCCCccccCCCCCceEe-eccccCccccccCCCCCeeEEE
Confidence 467888888865 346777776543210011145555443210 0000111 11111 11223 37999999
Q ss_pred EEEEeCCEEEEEECCcccee
Q psy5026 234 RLTRTGRHAYLQVDRFPSSQ 253 (293)
Q Consensus 234 ~i~r~~~~~~l~VD~~~~~~ 253 (293)
.|...+.++++.++|.....
T Consensus 126 ~I~~~g~~i~v~lNG~~V~~ 145 (201)
T 3imm_A 126 RIKCAGQHIMVILNGKKVTE 145 (201)
T ss_dssp EEEEETTEEEEEETTEEEEE
T ss_pred EEEEECCEEEEEECCEEEEE
Confidence 99999999999999986643
No 65
>1ioa_A Arcelin-5A, ARC5A; lectin-like proteins, plant defense proteins, lectin; HET: NAG FUC; 2.70A {Phaseolus vulgaris} SCOP: b.29.1.1
Probab=54.56 E-value=84 Score=25.37 Aligned_cols=81 Identities=11% Similarity=0.064 Sum_probs=48.4
Q ss_pred EEEEEEEEEeC------CCCeEEEEeccCCC-C-----------------CCCeEEEEEe--CCEEEEEEECCCceEEEE
Q psy5026 167 LLDLTIVFKAI------EPNGILLYNGHRAD-G-----------------VGDFIALYLN--DRYVDFTFDLGTGAATLR 220 (293)
Q Consensus 167 ~~~i~~~frt~------~~~GlLl~~~~~~~-~-----------------~~~~l~l~l~--~g~v~~~~~~g~~~~~~~ 220 (293)
.+..+|.|+-. ..+|+=|++..... . ....++|++. +.||-+-++.-.......
T Consensus 66 SFsT~F~F~I~~~~~~~~gdGlAF~l~p~~~~p~~~g~~LGL~n~~~~~~~~~~vAVEFDT~~nHVGIdvNs~~S~~t~~ 145 (240)
T 1ioa_A 66 SFNTNFTFIIRAKNQSISAYGLAFALVPVNSPPQKKQEFLGIFNTNNPEPNARTVAVVFNTFKNRIDFDKNFIKPYVNEN 145 (240)
T ss_dssp EEEEEEEEECCBSCTTSCCEEEEEEEEETTCCCCCCGGGTTTCCCSSCCGGGCCEEEEEETTTTEEEEEESSSSCSEEEE
T ss_pred cEEEEEEEEEeCCCCCCCCCcEEEEEecCCCCCCCCCCcccccccCCCCCcCcEEEEEecCcCCceeeeeCCcccccccc
Confidence 45666666532 36788887754211 0 1246888886 578777665432222222
Q ss_pred ecCCCCCCCeEEEEEEEeCC--EEEEEEC
Q psy5026 221 SSNPISLGEWRKLRLTRTGR--HAYLQVD 247 (293)
Q Consensus 221 ~~~~~~dg~wh~V~i~r~~~--~~~l~VD 247 (293)
-...+.+|+.++|.|.++.. .+.+.++
T Consensus 146 ~~~~l~~g~~~~v~I~Yd~~~~~L~V~l~ 174 (240)
T 1ioa_A 146 CDFHKYNGEKTDVQITYDSSNNDLRVFLH 174 (240)
T ss_dssp CCHHHHCSSCEEEEEEEETTTTEEEEEEE
T ss_pred CCccccCCCEEEEEEEEeCCCcEEEEEEe
Confidence 23345589999999999864 5666554
No 66
>2jkb_A Sialidase B; intramolecular trans-sialidase, lyase, glycosidase, neuraminidase; HET: SKD; 1.54A {Streptococcus pneumoniae} PDB: 2vw2_A* 2vw1_A* 2vw0_A*
Probab=51.13 E-value=1.1e+02 Score=28.88 Aligned_cols=111 Identities=11% Similarity=0.158 Sum_probs=61.2
Q ss_pred ceeEEEEEEEeCCCC--eEEEEeccCCC-CCCCeEEEEEE-CCEEEEEEeC--------------------C--CCCCeE
Q psy5026 6 QAWRFPIQFKPESWD--GILFLTGERDD-LNGDFMTLLIF-EGYVEFSTPY--------------------R--PYADIT 59 (293)
Q Consensus 6 ~~~~i~~~FrT~~~~--GlL~~~~~~~~-~~~~~~~l~l~-~G~l~~~~~~--------------------g--~w~~~~ 59 (293)
....|.|.|++...+ -.||-..+... ....|+.+.|. +|.+.+.+.. | .|+.+.
T Consensus 57 ~~~T~~~~~~~~~~~~~~~lfs~sn~~~~~~~~~~~~~i~~~g~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~va 136 (686)
T 2jkb_A 57 ESQTVVMKFKADKPNSLQALFGLSNSKAGFKNNYFSIFMRDSGEIGVEIRDAQKGINYLFSRPASLWGKHKGQAVENTLV 136 (686)
T ss_dssp SCEEEEEEEECSSCCSEEEEEEEECCSTTCTTCEEEEEEETTSCEEEEEEETTTTEEEEEEESSCCCCEETTEECCEEEE
T ss_pred CceEEEEEEEccCCCCeeEEEEeecCcccccCcceEEEEcCCCeEEEEEecCCCCeeeeccccccccccccCCcceeEEE
Confidence 457899999987654 25555554321 12478999996 6777665431 2 344444
Q ss_pred EEEe--ccEEEecccCCC------Cceeee-ecC--CceEEcCCCCCCCCCCCCCcccCceeeEEEEEEcCeee
Q psy5026 60 VHRT--VRTLILPYTVPS------GLFSRI-TFR--EPVFVGGRGNTSGLSDKLPTEKGFKGCIRHLDINDHLY 122 (293)
Q Consensus 60 ~~~~--~~~v~l~~~g~~------~~~~~l-~~~--~~l~iGG~p~~~~~~~~~~~~~~F~GCi~~~~~n~~~~ 122 (293)
+... ...+.|-.+|.. ..+..+ ++. ..+.||++..... . .-+|.|-|.++.|-+..+
T Consensus 137 ~~~d~~~~~~~lyvnG~~v~~~~~~~~~~~~~~~~~~~~~iG~~~~~g~-----~-~~~f~G~id~~~iy~~~L 204 (686)
T 2jkb_A 137 FVSDSKDKTYTMYVNGIEVFSETVDTFLPISNINGIDKATLGAVNREGK-----E-HYLAKGSIDEISLFNKAI 204 (686)
T ss_dssp EEEETTTTEEEEEETTEEEEEEECSSCCCGGGSTTCCEEEESSEEETTE-----E-ESCCEEEEEEEEEESSCC
T ss_pred EEEECCCCeEEEEECCEEEEeecccccceeccCCCcceeeecccccCCc-----c-cccccceEeEEEEecCCC
Confidence 4433 234555444421 011111 112 4677887522111 1 126999999999987655
No 67
>2nyy_A Botulinum neurotoxin type A; neurotoxin, FAB, protein antibody complex, toxin- system complex; 2.61A {Clostridium botulinum} PDB: 2nz9_A 3bta_A 3v0a_A* 3v0b_A 3v0c_A 3zus_A 3zur_A
Probab=50.56 E-value=2.1e+02 Score=28.79 Aligned_cols=102 Identities=9% Similarity=-0.011 Sum_probs=60.4
Q ss_pred eEEEEEEEEEeCCCC--------eEEEEeccCCCCCCCeEEEEEeCCEEEEEEECCCce-EEEEe----cCCCC--CCCe
Q psy5026 166 SLLDLTIVFKAIEPN--------GILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGA-ATLRS----SNPIS--LGEW 230 (293)
Q Consensus 166 ~~~~i~~~frt~~~~--------GlLl~~~~~~~~~~~~l~l~l~~g~v~~~~~~g~~~-~~~~~----~~~~~--dg~w 230 (293)
..++++|.+|...-+ -.|+-..... .=+.+.+.++.+...+....+. ..+.. ...+. -++|
T Consensus 938 ~nFSIsFWvRipk~~~~~~~~neyTIIg~~~nN----sGW~Is~~~n~LIWtl~Dsng~~k~I~f~y~~~~nisdyiNkW 1013 (1295)
T 2nyy_A 938 ENFSTSFWIRIPKYFNSISLNNEYTIINCMENN----SGWKVSLNYGEIIWTLQDTQEIKQRVVFKYSQMINISDYINRW 1013 (1295)
T ss_dssp SEEEEEEEEECCCCCSGGGGGCCEEEEEEEETT----EEEEEEEETTEEEEEEECSSSCEEEEEEECCSBSSSCSSTTSC
T ss_pred CceEEEEEEEcCCcccccccCCcceEEEeecCC----CCcEEEECCCeEEEEEecCCCccceEEEecccccchhhccCce
Confidence 478999999974211 2344222221 2277888899999887754442 32221 12222 2899
Q ss_pred EEEEEEEe-CCEEEEEECCccceeEecCCCcccccCCCCeEEe
Q psy5026 231 RKLRLTRT-GRHAYLQVDRFPSSQILSPGPFTQLSLSLSLYLG 272 (293)
Q Consensus 231 h~V~i~r~-~~~~~l~VD~~~~~~~~~~~~~~~l~~~~~lyvG 272 (293)
|.|++..+ .+.+.+-|||.........+. ..+.+...+-+|
T Consensus 1014 ~fVTITndRlgna~IYINGkLi~~~~I~~l-~nI~~sd~Isfk 1055 (1295)
T 2nyy_A 1014 IFVTITNNRLNNSKIYINGRLIDQKPISNL-GNIHASNNIMFK 1055 (1295)
T ss_dssp EEEEEEEETTSEEEEEETTEEEEEEECTTC-CCCCCCSEEEEE
T ss_pred EEEEEEEcCCCceeEEECCEEeecceeccc-CCcccCceEEEE
Confidence 99999998 677899999986654433222 223344444443
No 68
>1avb_A Arcelin-1; lectin-like glycoprotein, plant defense, insecticidal activi lectin; HET: NAG; 1.90A {Phaseolus vulgaris} SCOP: b.29.1.1
Probab=42.53 E-value=1.3e+02 Score=24.00 Aligned_cols=53 Identities=13% Similarity=0.099 Sum_probs=35.0
Q ss_pred CeEEEEEe--CCEEEEEEECCCceEEEEecCCCCCCCeEEEEEEEeCC--EEEEEEC
Q psy5026 195 DFIALYLN--DRYVDFTFDLGTGAATLRSSNPISLGEWRKLRLTRTGR--HAYLQVD 247 (293)
Q Consensus 195 ~~l~l~l~--~g~v~~~~~~g~~~~~~~~~~~~~dg~wh~V~i~r~~~--~~~l~VD 247 (293)
..++|++. +.||-+.++.-.......-...+.+|+.++|.|.++.. .+.+.++
T Consensus 116 ~~vAVEFDT~~nHVGIdvNs~~S~~t~~~~~~l~~g~~~~v~I~Yd~~~~~L~V~l~ 172 (226)
T 1avb_A 116 HTVAVVFDTVSNRIEIDVNSIRPIATESCNFGHNNGEKAEVRITYDSPKNDLRVSLL 172 (226)
T ss_dssp CCEEEEEETTTTEEEEEESSSSCSEEEECCSGGGTTCEEEEEEEEEGGGTEEEEEEE
T ss_pred cEEEEEecCcCCccceeecCcccCccccCCccccCCCeEEEEEEEeCCCcEEEEEEe
Confidence 46888886 57887766543222222234456689999999999864 6666664
No 69
>1epw_A Bontoxilysin B, botulinum neurotoxin type B; zinc, metalloprotease, transmembrane, hydrolase; 1.90A {Clostridium botulinum} SCOP: b.29.1.6 b.42.4.2 d.92.1.7 h.4.2.1 PDB: 1f31_A* 1g9a_A* 1g9b_A* 1g9c_A* 1g9d_A* 1i1e_A* 1s0b_A 1s0c_A 1s0d_A 1s0e_A 1s0f_A 1s0g_A 2np0_A 3zuq_A 2etf_A 2xhl_A 1z0h_A 2nm1_A 3g94_A 1f82_A ...
Probab=38.82 E-value=3.2e+02 Score=27.54 Aligned_cols=86 Identities=9% Similarity=0.031 Sum_probs=56.5
Q ss_pred eEEEEEEEEEeCCC-----C------eEEEEeccCCCCCCCeEEEEEeCCEEEEEEECCCce-EEEEe----cCCCC--C
Q psy5026 166 SLLDLTIVFKAIEP-----N------GILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGA-ATLRS----SNPIS--L 227 (293)
Q Consensus 166 ~~~~i~~~frt~~~-----~------GlLl~~~~~~~~~~~~l~l~l~~g~v~~~~~~g~~~-~~~~~----~~~~~--d 227 (293)
..++++|.+|...- . -.|+-..... .=+.+.+.++.+...+....+. ..+-. ...+. -
T Consensus 923 ~nFSIsFWiRipk~~~~~it~y~~nEyTiIg~~~nN----sGW~Isi~~n~lIWtl~D~ng~~k~I~f~y~~~~nisdyi 998 (1290)
T 1epw_A 923 LDFSVSFWIRIPKYKNDGIQNYIHNEYTIINCMKNN----SGWKISIRGNRIIWTLIDINGKTKSVFFEYNIREDISEYI 998 (1290)
T ss_dssp CCEEEEEEEECCCCCGGGHHHHHHCEEEEEEEEETT----EEEEEEEETTEEEEEEECTTCCEEEEEEECCSSCSSCSST
T ss_pred cceeEEEEEEcCCccccccccccCCCceEEEEecCC----CCcEEEECCCeEEEEEecCCCcceeEEEecccccchhhcc
Confidence 37899999997544 1 3444222222 2278888999999887654442 22221 12222 2
Q ss_pred CCeEEEEEEEeCCEEEEEECCccceeEe
Q psy5026 228 GEWRKLRLTRTGRHAYLQVDRFPSSQIL 255 (293)
Q Consensus 228 g~wh~V~i~r~~~~~~l~VD~~~~~~~~ 255 (293)
++||.|++..+.+.+.+-+||.......
T Consensus 999 NkW~fVTItndlg~~~IYING~Li~~~~ 1026 (1290)
T 1epw_A 999 NRWFFVTITNNLNNAKIYINGKLESNTD 1026 (1290)
T ss_dssp TSCEEEEEEECSSEEEEEETTEEEEEEE
T ss_pred CceEEEEEEecCCceEEEECCEEeechh
Confidence 8999999999988999999998665443
No 70
>3vuo_A NTNHA; protection of botulinum neurotoxin, botulinum neurotoxin, to; 3.90A {Clostridium botulinum}
Probab=31.92 E-value=4.1e+02 Score=26.73 Aligned_cols=85 Identities=11% Similarity=0.164 Sum_probs=56.8
Q ss_pred eEEEEEEEEEeCCCC--eEEEEeccCCCCCCCeEEEEEeCCEEEEEEECCCc-eEEEEecCCCCCCCeEEEEEEEe--CC
Q psy5026 166 SLLDLTIVFKAIEPN--GILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTG-AATLRSSNPISLGEWRKLRLTRT--GR 240 (293)
Q Consensus 166 ~~~~i~~~frt~~~~--GlLl~~~~~~~~~~~~l~l~l~~g~v~~~~~~g~~-~~~~~~~~~~~dg~wh~V~i~r~--~~ 240 (293)
..|+++|.+|....+ ..-+...... ..=+.+.+.++.+...+....+ ...+.....++ ++||-|++.-+ ++
T Consensus 899 ~nFSISFWiRi~k~~~~~~~iI~~~~n---NSGWkIsl~~n~IIwtLqD~ngn~k~i~fs~~i~-NkW~FVTITnnRL~~ 974 (1196)
T 3vuo_A 899 NNFTICFWLRFTGKDDDKTRLIGNKVN---NCGWEIYFEDNGLVFEIIDSNGNQESVYLSNVIN-NNWYYISISVDRLKD 974 (1196)
T ss_dssp CCEEEEEEEEECCCCSSCEEEEEEECS---SCEEEEEEETTEEEEEEECTTCCEEEEEECSCTT-SCCEEEEEEEETTTT
T ss_pred cceeEEEEEEccCCCCCceeEeeeccc---CCCcEEEEeCCcEEEEEEecCCceeeEEEeEeec-ceEEEEEEEecccCc
Confidence 468999999965322 2222221111 3458999999999998766544 34455444444 79999999987 48
Q ss_pred EEEEEECCccceeE
Q psy5026 241 HAYLQVDRFPSSQI 254 (293)
Q Consensus 241 ~~~l~VD~~~~~~~ 254 (293)
++.+-++|......
T Consensus 975 s~~IYING~Li~~~ 988 (1196)
T 3vuo_A 975 QLLIFINDKNVANV 988 (1196)
T ss_dssp EEEEEETTEEEEEE
T ss_pred eeEEEECCEEecch
Confidence 88999999866443
No 71
>2zzj_A Glucuronan lyase A; beta-jelly roll; HET: CIT; 1.80A {Trichoderma reesei}
Probab=31.10 E-value=2.1e+02 Score=23.08 Aligned_cols=60 Identities=12% Similarity=0.124 Sum_probs=38.1
Q ss_pred eEEEEEeCCEEEEEEECCCc------e--EEEEecCCCCCCCeEEEEEEEe-----CCEEEEEECCccceeEe
Q psy5026 196 FIALYLNDRYVDFTFDLGTG------A--ATLRSSNPISLGEWRKLRLTRT-----GRHAYLQVDRFPSSQIL 255 (293)
Q Consensus 196 ~l~l~l~~g~v~~~~~~g~~------~--~~~~~~~~~~dg~wh~V~i~r~-----~~~~~l~VD~~~~~~~~ 255 (293)
.+.+.+...++..++..|.- . ....--.++.-|+||.+.|..+ .+-++|-+||.......
T Consensus 109 ~~~~~v~G~~l~~r~~sgt~~~p~~~~~~~~~~~l~~v~~G~Wh~iVihvkWs~d~~Gf~~vW~dG~~v~~~~ 181 (238)
T 2zzj_A 109 STMIWIQNNQLYSRYVNGHYRQPNCGRNIVTRPNLATVSAGAWHRVVLQIKWASDNTGYFKIWFDGAKVHEEY 181 (238)
T ss_dssp EEEEEEETTEEEEEEEEECCBTTBCCEEEEEEEEEEECCTTSCEEEEEEEEECSSTTEEEEEEETTEEEEEEE
T ss_pred ceeEEEeCCEEEEEeecccccccCcCccceeccccccccCCceEEEEEEEEEeCCCCcEEEEEECCEEEEeec
Confidence 45667777777766655431 1 1222234688999999997764 34568888998664433
No 72
>3zyp_A CIP1; metal binding protein, calcium-binding, CBM-containing, beta sandwich jelly roll, carbohydrate-binding; HET: NAG; 1.50A {Hypocrea jecorina}
Probab=29.42 E-value=1.7e+02 Score=22.88 Aligned_cols=84 Identities=6% Similarity=0.022 Sum_probs=47.0
Q ss_pred EEEEEEEEEeCC----CCeEEEEeccCCCCCCCeEEEEEeCCEEEEEEECCCceE------EEEecCCCCCCCeEEEEEE
Q psy5026 167 LLDLTIVFKAIE----PNGILLYNGHRADGVGDFIALYLNDRYVDFTFDLGTGAA------TLRSSNPISLGEWRKLRLT 236 (293)
Q Consensus 167 ~~~i~~~frt~~----~~GlLl~~~~~~~~~~~~l~l~l~~g~v~~~~~~g~~~~------~~~~~~~~~dg~wh~V~i~ 236 (293)
.+.+++.+|... .+..|+-+..... ...-+.+.-..+.+........... ......++..|+||.|++.
T Consensus 66 ~~y~r~~v~~~~~~~~~~~t~~~~~~~~~-~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~~l~~g~W~cvE~~ 144 (218)
T 3zyp_A 66 DVYVRAWIRLQTALGSNHVTFIIMPDTAQ-GGKHLRIGGQSQVLDYNRESDDATLPDLSPNGIASTVTLPTGAFQCFEYH 144 (218)
T ss_dssp SEEEEEEEEESSCCCSSCEEEEEEEBGGG-TTCEEEEEEETTEEEEEETTTCCEESCSSHHHHHHSCCCCCSSCEEEEEE
T ss_pred eEEEEEEEEecccCCCCcEEEEEeecCCC-CCceEEeecccceeeEEEcCCccccCcccccccccceeecCCcEEEEEEE
Confidence 345666666432 2344444432221 1445666656777655442221111 1122346889999999987
Q ss_pred Ee-CCEEEEEECCccc
Q psy5026 237 RT-GRHAYLQVDRFPS 251 (293)
Q Consensus 237 r~-~~~~~l~VD~~~~ 251 (293)
.. .+.+++-+||...
T Consensus 145 ~~~~G~~~~W~DG~~v 160 (218)
T 3zyp_A 145 LGTDGTIETWLNGSLI 160 (218)
T ss_dssp ECSSSCEEEEETTEEC
T ss_pred ECCCCeEEEEECCEEe
Confidence 74 5788999999754
No 73
>3h3l_A Putative sugar hydrolase; YP_001304206.1, structural genomic center for structural genomics, JCSG; HET: MSE; 1.59A {Parabacteroides distasonis atcc 8503}
Probab=28.07 E-value=79 Score=25.57 Aligned_cols=87 Identities=14% Similarity=0.124 Sum_probs=49.6
Q ss_pred eEEEEEEEEEeC--CCCeEEEEeccCCCCCCC-e---EEEEEeCCE--EEEEE------ECCCceEEEE-e--cCCCCCC
Q psy5026 166 SLLDLTIVFKAI--EPNGILLYNGHRADGVGD-F---IALYLNDRY--VDFTF------DLGTGAATLR-S--SNPISLG 228 (293)
Q Consensus 166 ~~~~i~~~frt~--~~~GlLl~~~~~~~~~~~-~---l~l~l~~g~--v~~~~------~~g~~~~~~~-~--~~~~~dg 228 (293)
..|.|+++||.. ..+|+.+....... .. | ..+.|.++. ..... ..| +...+. + ......|
T Consensus 77 ~dF~L~lE~k~~~~~NSGI~~r~~~~~~--~~~~~~G~EvQIlD~~~~p~~~~g~~~~~~~G-slY~~~~~~~~~~kp~G 153 (241)
T 3h3l_A 77 KNFVFEIEWKIDKAGNSGIFYTAQEIEG--TPIYYSSPEYQLLDNENMPDAWEGCDGNRQAG-AVYDMIMPDPQPVKPYG 153 (241)
T ss_dssp SSEEEEEEEEECBTCEEEEEEEECCCTT--SCGGGSSCEEEEECTTTCGGGSSSSTTTTSTT-SBTTTBCCSSCCCCCTT
T ss_pred ccEEEEEEEEeCCCCCceEEEEecCCCC--CcCCCceEEEEEecCCCCCcccccCCCCCcee-eecccccCccccCCCCC
Confidence 467888888865 45678877654321 11 1 345554321 00000 011 111111 1 2234579
Q ss_pred CeEEEEEEEeCCEEEEEECCccceeEe
Q psy5026 229 EWRKLRLTRTGRHAYLQVDRFPSSQIL 255 (293)
Q Consensus 229 ~wh~V~i~r~~~~~~l~VD~~~~~~~~ 255 (293)
+|++..|...++.+++.|+|.......
T Consensus 154 eWNt~~I~v~g~~v~v~lNG~~V~~~~ 180 (241)
T 3h3l_A 154 NWNKTRIVVYNQRVIHYMNDVKILEFQ 180 (241)
T ss_dssp SCEEEEEEEETTEEEEEETTEEEEEEE
T ss_pred cceEEEEEEECCEEEEEECCEEEEEEE
Confidence 999999999999999999998665443
No 74
>3s5q_A Putative glycosylhydrolase; concanavalin A-like lectins/glucanases, structural genomics, center for structural genomics, JCSG; 1.85A {Parabacteroides distasonis}
Probab=27.93 E-value=77 Score=25.08 Aligned_cols=87 Identities=15% Similarity=0.272 Sum_probs=48.2
Q ss_pred eEEEEEEEEEeC--CCCeEEEEeccCCCCCCCeEEEEEeCCEEE------EEEECCCceEEEE---ecCCC-CCCCeEEE
Q psy5026 166 SLLDLTIVFKAI--EPNGILLYNGHRADGVGDFIALYLNDRYVD------FTFDLGTGAATLR---SSNPI-SLGEWRKL 233 (293)
Q Consensus 166 ~~~~i~~~frt~--~~~GlLl~~~~~~~~~~~~l~l~l~~g~v~------~~~~~g~~~~~~~---~~~~~-~dg~wh~V 233 (293)
..|.|+++||.. ..+|+.+........-..=..+.|.++.-. -.-..|+ ...+. ..... ..|+|++.
T Consensus 60 ~dF~L~lE~k~~~~~NSGI~~r~~~~~~~~~~G~EvQIlD~~~~~~~~~~~~~~~Gs-lY~~~~~~~~~~~kp~GeWN~~ 138 (214)
T 3s5q_A 60 ENFILDLEFKTDVNTNSGVVIYCTDKGNWIPSSIEIQIADDHHPEWQSYPEYWRCGS-IYGHKGANEQLVVKKPGEWNRM 138 (214)
T ss_dssp CSEEEEEEEEECTTCEEEEEEEESCSTTCGGGSEEEEEECTTSGGGGGSCGGGSTTS-BTTTBCCSSSCCSCCTTSEEEE
T ss_pred ccEEEEEEEEECCCCccEEEEEecCCCCCcccEEEEEEecCCCCcccccCCCCceEe-eccccCcccccccCCCCccEEE
Confidence 467888888865 346777776543210001134544433110 0000111 11111 11223 37999999
Q ss_pred EEEEeCCEEEEEECCcccee
Q psy5026 234 RLTRTGRHAYLQVDRFPSSQ 253 (293)
Q Consensus 234 ~i~r~~~~~~l~VD~~~~~~ 253 (293)
.|...++++++.++|.....
T Consensus 139 ~I~~~g~~i~v~lNG~~V~~ 158 (214)
T 3s5q_A 139 IITAKGQQIDIELNGKHIVS 158 (214)
T ss_dssp EEEEETTEEEEEETTEEEEE
T ss_pred EEEEECCEEEEEECCEEEEE
Confidence 99999999999999986643
No 75
>2jtd_A Myomesin-1, skelemin; immunoglobulin domain, muscle protein, thick filament, immune system, cell adhesion; NMR {Mus musculus}
Probab=27.92 E-value=96 Score=22.45 Aligned_cols=56 Identities=13% Similarity=0.147 Sum_probs=40.7
Q ss_pred CCeEEEEE-eCCEEEEEEECCC--c--eEEEE-ecCCCCCCCeEEEEEEEeCCEEEEEECCc
Q psy5026 194 GDFIALYL-NDRYVDFTFDLGT--G--AATLR-SSNPISLGEWRKLRLTRTGRHAYLQVDRF 249 (293)
Q Consensus 194 ~~~l~l~l-~~g~v~~~~~~g~--~--~~~~~-~~~~~~dg~wh~V~i~r~~~~~~l~VD~~ 249 (293)
..-+++++ +.|+|++.+.... . .+.+. -...+.+|.-|.+.+.++.+-+.|.+|.-
T Consensus 42 ksel~vEiLEkG~VRfWlQaeklS~~a~~~~ifNdkei~~~~~~ki~fD~~tGiIEmime~~ 103 (142)
T 2jtd_A 42 KSELAVEILEKGQVRFWMQAEKLSSNAKVSYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKL 103 (142)
T ss_dssp SCEEEEEEETTTEEEEEEECSCCTTCCEEEEEETTEECCSSSSCCEEECSSSCCEEEEECCC
T ss_pred hhhhhHHHHhcCcEEEEEEhhhcCCCceEEEEeccceeccCCCeeEeecccCChhhhhHhhc
Confidence 34477776 5899999876652 2 23333 35668889999999999999999988754
No 76
>1ms9_A Trans-sialidase; trans-glycosylation, protein-acrbohydrate interac beta-propeller, hydrolase; HET: LAT; 1.58A {Trypanosoma cruzi} SCOP: b.29.1.15 b.68.1.1 PDB: 1ms0_A* 1mr5_A* 1ms1_A 1ms4_A 1ms8_A* 1ms3_A* 2ah2_A* 3b69_A* 3opz_A 3pjq_A* 1s0i_A* 1s0j_A* 1ms5_A 1wcs_A 2ags_A* 2a75_A* 2fhr_A* 1n1t_A* 1n1s_A* 1n1v_A* ...
Probab=27.40 E-value=79 Score=29.76 Aligned_cols=52 Identities=15% Similarity=0.188 Sum_probs=33.6
Q ss_pred CCCCCCeEEEEEEEeCCEEEEEECCccc-eeEecC-CCcccccCCCCeEEeccCC
Q psy5026 224 PISLGEWRKLRLTRTGRHAYLQVDRFPS-SQILSP-GPFTQLSLSLSLYLGGVPD 276 (293)
Q Consensus 224 ~~~dg~wh~V~i~r~~~~~~l~VD~~~~-~~~~~~-~~~~~l~~~~~lyvGG~p~ 276 (293)
.-.-++-|+|.+...+++.+..|||+.. .....+ .......+ ...||||.-.
T Consensus 552 ~we~~~~~qv~l~l~~~~~s~yvdg~~~~~~~~~~~~~~~~~~i-shfy~g~~~~ 605 (648)
T 1ms9_A 552 SWEMGKRYHVVLTMANKIGSVYIDGEPLEGSGQTVVPDERTPDI-SHFYVGGYKR 605 (648)
T ss_dssp CCCTTCEEEEEEEEETTEEEEEETTEECTTCCEECSCSSCCCCC-CEEEESSCSC
T ss_pred cccCCcceEEEEEEeCCcEEEEECCEEecCCcccccccCCCccc-ceEEEcCCCC
Confidence 3455788999999988899999999854 111111 11112222 3799999654
No 77
>1ajo_A CPA16M-127, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase CPA16M-127; glucanase, circular permutation; 2.07A {Paenibacillus macerans} SCOP: b.29.1.2
Probab=27.17 E-value=1.4e+02 Score=23.52 Aligned_cols=25 Identities=8% Similarity=-0.039 Sum_probs=22.1
Q ss_pred CCeEEEEEEEeCCEEEEEECCccce
Q psy5026 228 GEWRKLRLTRTGRHAYLQVDRFPSS 252 (293)
Q Consensus 228 g~wh~V~i~r~~~~~~l~VD~~~~~ 252 (293)
..||+-.+..+.+++...||+....
T Consensus 16 ~~fH~Y~i~W~~~~I~~~VDg~~~~ 40 (214)
T 1ajo_A 16 KGFHTYAFDWQPGYIKWYVDGVLKH 40 (214)
T ss_dssp GSCEEEEEEEETTEEEEEETTEEEE
T ss_pred CCcEEEEEEEeCCeEEEEECCEEEE
Confidence 4599999999999999999998553
No 78
>3i4i_A 1,3-1,4-beta-glucanase; beta-sandwich, hydrolase; 1.89A {Uncultured murine large bowel bacteriuorganism_taxid}
Probab=26.56 E-value=1e+02 Score=24.71 Aligned_cols=26 Identities=8% Similarity=-0.084 Sum_probs=23.2
Q ss_pred CCCeEEEEEEEeCCEEEEEECCccce
Q psy5026 227 LGEWRKLRLTRTGRHAYLQVDRFPSS 252 (293)
Q Consensus 227 dg~wh~V~i~r~~~~~~l~VD~~~~~ 252 (293)
...||+-.+..+.+++...|||....
T Consensus 161 ~~~fHtY~ieW~p~~I~~yVDG~~~~ 186 (234)
T 3i4i_A 161 SEDFHIYAFNWQPNYIAWLVDGEEVY 186 (234)
T ss_dssp TTSCEEEEEEEETTEEEEEETTEEEE
T ss_pred cCCeEEEEEEEECCEEEEEECCEEEE
Confidence 57899999999999999999998553
No 79
>1w0p_A Sialidase; hydrolase, neuraminidase, lectin; HET: SIA; 1.6A {Vibrio cholerae} SCOP: b.29.1.8 b.29.1.8 b.68.1.1 PDB: 1w0o_A* 1kit_A 2w68_A*
Probab=24.67 E-value=1.6e+02 Score=28.31 Aligned_cols=80 Identities=18% Similarity=0.176 Sum_probs=47.0
Q ss_pred EEEEEEEEEeCCCCeEEEEeccCCCCCCCeEEE-EEe-CCEEEEEEECCCceEEEEecCCCCCCCeEEEEEEEe---CCE
Q psy5026 167 LLDLTIVFKAIEPNGILLYNGHRADGVGDFIAL-YLN-DRYVDFTFDLGTGAATLRSSNPISLGEWRKLRLTRT---GRH 241 (293)
Q Consensus 167 ~~~i~~~frt~~~~GlLl~~~~~~~~~~~~l~l-~l~-~g~v~~~~~~g~~~~~~~~~~~~~dg~wh~V~i~r~---~~~ 241 (293)
-..++-+.|-.+...+.=|-++.. ..|+.+ ++. +|.+.+.+.-..+...+.+.. +|+.||.+.+... ...
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~---~r~~~~~~~~~~g~~~~~~~~~~g~~~~~~g~--~~~~~h~~~~~~~~~~~~~ 167 (781)
T 1w0p_A 93 GWRMTTEMKVLSGGMITNYYANGT---QRVLPIISLDSSGNLVVEFEGQTGRTVLATGT--AATEYHKFELVFLPGSNPS 167 (781)
T ss_dssp CEEEEEEEEEEEESCBCCEEECSS---EEECEEEEECTTSCEEEEETTCCSCEEEECGG--GGGSCEEEEEEEECSSSCE
T ss_pred CceEEEEEEEecCCceeeeecCCC---ceEEEEEEEcCCCcEEEEEEccCCCeeeccCC--CCCceeEEEEEeecCCCce
Confidence 345555555443333332333332 456555 444 477777774333444444443 8999999998843 558
Q ss_pred EEEEECCccc
Q psy5026 242 AYLQVDRFPS 251 (293)
Q Consensus 242 ~~l~VD~~~~ 251 (293)
+.+.+||..-
T Consensus 168 ~~f~~dG~l~ 177 (781)
T 1w0p_A 168 ASFYFDGKLI 177 (781)
T ss_dssp EEEEETTEEE
T ss_pred eEEecCCcEE
Confidence 8999999744
No 80
>3osd_A Putative glycosyl hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE; 1.80A {Bacteroides thetaiotaomicron} PDB: 3nmb_A 4hxc_A*
Probab=24.15 E-value=1e+02 Score=25.35 Aligned_cols=31 Identities=13% Similarity=0.145 Sum_probs=26.0
Q ss_pred CCCCCeEEEEEEEeCCEEEEEECCccceeEe
Q psy5026 225 ISLGEWRKLRLTRTGRHAYLQVDRFPSSQIL 255 (293)
Q Consensus 225 ~~dg~wh~V~i~r~~~~~~l~VD~~~~~~~~ 255 (293)
...|+|++..|...+..++..++|.......
T Consensus 176 kp~GeWNt~~I~v~g~~v~v~lNG~~V~d~~ 206 (265)
T 3osd_A 176 KPFGEWNKAKIMVYKGTVVHGQNDENVLEYH 206 (265)
T ss_dssp CCTTSCEEEEEEEETTEEEEEETTEEEEEEE
T ss_pred CCCCceEEEEEEEECCEEEEEECCEEEEEee
Confidence 3469999999999999999999998665443
No 81
>3gne_A Val-1; alginate lyase, polysaccharide lyase family 14, chlorella VI lyase; HET: FLC; 1.20A {Chlorella virus} PDB: 3a0n_A* 3im0_A*
Probab=23.96 E-value=71 Score=26.07 Aligned_cols=28 Identities=11% Similarity=0.354 Sum_probs=22.6
Q ss_pred CCCCCCeEEEEEEEeCCE-----------EEEEECCccc
Q psy5026 224 PISLGEWRKLRLTRTGRH-----------AYLQVDRFPS 251 (293)
Q Consensus 224 ~~~dg~wh~V~i~r~~~~-----------~~l~VD~~~~ 251 (293)
.+..|+||+|+...+-+. +.+.|||+..
T Consensus 159 ~f~~G~W~~V~q~VkLNT~~~G~g~aDG~v~v~VNG~~v 197 (252)
T 3gne_A 159 ALKYDVWNRIEIGTKMNTFKNGIPQLDGESYVIVNGKKE 197 (252)
T ss_dssp CSCBTSCEEEEEEEECCCEETTEECSCEEEEEEETTEEE
T ss_pred eEcCCceEEEEEEEEcCCCCCCCccCCceEEEEECCEEE
Confidence 688999999998776444 4899999865
No 82
>3o5s_A Beta-glucanase; glycosyl hydrolase, beta-jelly roll, hydrolase; HET: B3P; 2.20A {Bacillus subtilis} PDB: 3d6e_A
Probab=23.83 E-value=69 Score=25.79 Aligned_cols=27 Identities=7% Similarity=-0.008 Sum_probs=23.4
Q ss_pred CCCeEEEEEEEeCCEEEEEECCcccee
Q psy5026 227 LGEWRKLRLTRTGRHAYLQVDRFPSSQ 253 (293)
Q Consensus 227 dg~wh~V~i~r~~~~~~l~VD~~~~~~ 253 (293)
...||+-.+..+.+++...|||.....
T Consensus 165 ~~~fHtY~ieW~p~~I~~yVDG~~~~~ 191 (238)
T 3o5s_A 165 ANAYHTYAFDWQPNSIKWYVDGQLKHT 191 (238)
T ss_dssp GGSCEEEEEEECSSCEEEEETTEEEEE
T ss_pred ccCeEEEEEEEECCEEEEEECCEEEEE
Confidence 467999999999999999999985533
No 83
>2ayh_A 1,3-1,4-beta-D-glucan 4-glucanohydrolase; hydrolase (glucanase); 1.60A {Hybrid} SCOP: b.29.1.2 PDB: 1byh_A 1glh_A 1u0a_A* 1mac_A 1gbg_A
Probab=23.71 E-value=94 Score=24.27 Aligned_cols=26 Identities=8% Similarity=-0.064 Sum_probs=22.9
Q ss_pred CCCeEEEEEEEeCCEEEEEECCccce
Q psy5026 227 LGEWRKLRLTRTGRHAYLQVDRFPSS 252 (293)
Q Consensus 227 dg~wh~V~i~r~~~~~~l~VD~~~~~ 252 (293)
...||+-.+....+.+...|||+...
T Consensus 141 ~~~fH~Y~~~W~~~~I~~yvDg~~~~ 166 (214)
T 2ayh_A 141 SKGFHTYAFDWQPGYIKWYVDGVLKH 166 (214)
T ss_dssp GGSCEEEEEEEETTEEEEEETTEEEE
T ss_pred CCCeEEEEEEEeCCEEEEEECCEEEE
Confidence 35799999999999999999998653
No 84
>1cpn_A Circularly permuted; hydrolase(glucanase); 1.80A {Paenibacillus macerans} SCOP: b.29.1.2 PDB: 1cpm_A
Probab=21.89 E-value=1.1e+02 Score=23.94 Aligned_cols=27 Identities=7% Similarity=-0.061 Sum_probs=23.2
Q ss_pred CCCeEEEEEEEeCCEEEEEECCcccee
Q psy5026 227 LGEWRKLRLTRTGRHAYLQVDRFPSSQ 253 (293)
Q Consensus 227 dg~wh~V~i~r~~~~~~l~VD~~~~~~ 253 (293)
...||+-.+....+.+...|||.....
T Consensus 83 ~~~fHtY~veW~p~~I~~yVDG~~~~t 109 (208)
T 1cpn_A 83 SKGFHTYAFDWQPGYIKWYVDGVLKHT 109 (208)
T ss_dssp GGSCEEEEEEEETTEEEEEETTEEEEE
T ss_pred ccCcEEEEEEECCCeEEEEECCEEEEE
Confidence 357999999999999999999986533
No 85
>3hbk_A Putative glycosyl hydrolase; YP_001302580.1, WAS domain of U function (DUF1080), structural genomics; HET: MSE; 2.36A {Parabacteroides distasonis atcc 8503}
Probab=21.22 E-value=1.2e+02 Score=24.62 Aligned_cols=31 Identities=13% Similarity=0.197 Sum_probs=25.7
Q ss_pred CCCCCeEEEEEEE-eCCEEEEEECCccceeEe
Q psy5026 225 ISLGEWRKLRLTR-TGRHAYLQVDRFPSSQIL 255 (293)
Q Consensus 225 ~~dg~wh~V~i~r-~~~~~~l~VD~~~~~~~~ 255 (293)
...|+|++..|.. .+.++++.++|.......
T Consensus 160 kp~GeWNt~~I~~~~g~~v~v~lNG~~V~~~~ 191 (245)
T 3hbk_A 160 NGVGEWNTAVVKVFPNNHVEHWLNGVKVLEYE 191 (245)
T ss_dssp CCTTSEEEEEEEECTTCEEEEEETTEEEEEEE
T ss_pred CCCCccEEEEEEEEcCCEEEEEECCEEEEEEe
Confidence 3369999999999 899999999998665443
No 86
>1oq1_A Protein YESU; structural genomics, singleton, PSI, protein structure initi midwest center for structural genomics, MCSG, unknown funct; 1.70A {Bacillus subtilis} SCOP: b.29.1.17
Probab=20.31 E-value=1.2e+02 Score=24.15 Aligned_cols=27 Identities=7% Similarity=0.140 Sum_probs=23.6
Q ss_pred CCCCCeEEEEEEEeCCEEEEEECCccc
Q psy5026 225 ISLGEWRKLRLTRTGRHAYLQVDRFPS 251 (293)
Q Consensus 225 ~~dg~wh~V~i~r~~~~~~l~VD~~~~ 251 (293)
...++|++|.|...+..++..|||...
T Consensus 155 ~dan~~Y~i~i~kd~~~v~f~vNg~~l 181 (223)
T 1oq1_A 155 DDADSPYRMKLIKDKGYVHFSINGLPI 181 (223)
T ss_dssp GGCCSCEEEEEEEETTEEEEEETTEEE
T ss_pred cCCCCcEEEEEEEeCCEEEEEECCEEE
Confidence 344689999999999999999999855
No 87
>2uwa_A Cellulase; glycoside hydrolase, xyloglucan-endo-transferase, hydrolase, glycosidase, family GH16, tropaeolum majus xyloglucanase; 1.8A {Tropaeolum majus} PDB: 2uwc_A 2uwb_A 2vh9_A*
Probab=20.08 E-value=2.5e+02 Score=22.94 Aligned_cols=28 Identities=14% Similarity=0.215 Sum_probs=23.9
Q ss_pred CCCeEEEEEEEeCCEEEEEECCccceeE
Q psy5026 227 LGEWRKLRLTRTGRHAYLQVDRFPSSQI 254 (293)
Q Consensus 227 dg~wh~V~i~r~~~~~~l~VD~~~~~~~ 254 (293)
...||+-.+..+.+++...|||......
T Consensus 141 ~~~FHtY~ieWtp~~I~fyVDG~~v~t~ 168 (274)
T 2uwa_A 141 TQDYHNYAIYWTPSEIIFFVDDVPIRRY 168 (274)
T ss_dssp TSSCEEEEEEECSSEEEEEETTEEEEEE
T ss_pred CCCcEEEEEEEecCeEEEEECCeEEEEE
Confidence 4679999999999999999999865433
Done!