BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5031
(281 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9VC57|ATLAS_DROME Atlastin OS=Drosophila melanogaster GN=atl PE=1 SV=1
Length = 541
Score = 241 bits (614), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 115/146 (78%), Positives = 126/146 (86%), Gaps = 1/146 (0%)
Query: 136 AFRKGKSFLLDFLLRYMNFTYIEEAPSGDWMGPDDVPLEGFSWRGGSERDTTGILMWSHV 195
AFRKGKSFLLDF LRYM Y+ + DW+G + PLEGFSWRGGSERDTTGILMWS +
Sbjct: 46 AFRKGKSFLLDFFLRYMYSKYVHHDAT-DWLGGESDPLEGFSWRGGSERDTTGILMWSDI 104
Query: 196 YIATLPTGEKAAVILLDTQGTFDSESTVRDCATVFALSTMLSSIQIYNLSQNIQEDDLQH 255
++ P G+K A+ILLDTQG FDS+STVRDCATVFALSTMLSS+QIYNLSQNIQEDDLQH
Sbjct: 105 FLHDYPNGDKIAIILLDTQGAFDSQSTVRDCATVFALSTMLSSVQIYNLSQNIQEDDLQH 164
Query: 256 LQLFTEYGRLALADTGTKPFQRLQFL 281
LQLFTEYGRLALADTG KPFQRLQFL
Sbjct: 165 LQLFTEYGRLALADTGKKPFQRLQFL 190
Score = 145 bits (367), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 65/113 (57%), Positives = 87/113 (76%), Gaps = 1/113 (0%)
Query: 23 AIQIVKSEEKHKFILDYEALERILLQDHVKDKHVVVVSVAGAFRKGKSFLLDFLLRYMNF 82
A+Q++ + E+H F+L+ +AL +L++D VKD+ V VVSVAGAFRKGKSFLLDF LRYM
Sbjct: 5 AVQVINASEEHTFVLNEDALSEVLMRDEVKDRFVCVVSVAGAFRKGKSFLLDFFLRYMYS 64
Query: 83 TYIEEAPSGDWMGPDDVPLEGFSWRGGSERDTTGILMWSHVYIATLPTGEKVS 135
Y+ + DW+G + PLEGFSWRGGSERDTTGILMWS +++ P G+K++
Sbjct: 65 KYVHHDAT-DWLGGESDPLEGFSWRGGSERDTTGILMWSDIFLHDYPNGDKIA 116
>sp|Q58D72|ATLA1_BOVIN Atlastin-1 OS=Bos taurus GN=ATL1 PE=2 SV=2
Length = 558
Score = 210 bits (535), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 102/146 (69%), Positives = 122/146 (83%), Gaps = 5/146 (3%)
Query: 136 AFRKGKSFLLDFLLRYMNFTYIEEAPSGDWMGPDDVPLEGFSWRGGSERDTTGILMWSHV 195
AFRKGKSFL+DF+LRYM Y +E S DW+G + PL GFSWRGGSER+TTGI +WS +
Sbjct: 75 AFRKGKSFLMDFMLRYM---YNQE--SVDWVGDHNEPLTGFSWRGGSERETTGIQIWSEI 129
Query: 196 YIATLPTGEKAAVILLDTQGTFDSESTVRDCATVFALSTMLSSIQIYNLSQNIQEDDLQH 255
++ P G+K AV+L+DTQGTFDS+ST+RD ATVFALSTM+SSIQ+YNLSQN+QEDDLQH
Sbjct: 130 FLINKPDGKKVAVLLMDTQGTFDSQSTLRDSATVFALSTMISSIQVYNLSQNVQEDDLQH 189
Query: 256 LQLFTEYGRLALADTGTKPFQRLQFL 281
LQLFTEYGRLA+ +T KPFQ L FL
Sbjct: 190 LQLFTEYGRLAMEETFLKPFQSLIFL 215
Score = 135 bits (340), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 67/124 (54%), Positives = 89/124 (71%), Gaps = 5/124 (4%)
Query: 14 EEDSLPQYGAIQIVKSEEKHKFILDYEALERILLQDHVKDKHVVVVSVAGAFRKGKSFLL 73
EE+ + + G +Q++ ++ H F LD AL RILL + V+DK VV VSVAGAFRKGKSFL+
Sbjct: 25 EEEPVKKAGPVQVLVVKDDHSFELDETALNRILLSEAVRDKEVVAVSVAGAFRKGKSFLM 84
Query: 74 DFLLRYMNFTYIEEAPSGDWMGPDDVPLEGFSWRGGSERDTTGILMWSHVYIATLPTGEK 133
DF+LRYM Y +E S DW+G + PL GFSWRGGSER+TTGI +WS +++ P G+K
Sbjct: 85 DFMLRYM---YNQE--SVDWVGDHNEPLTGFSWRGGSERETTGIQIWSEIFLINKPDGKK 139
Query: 134 VSAF 137
V+
Sbjct: 140 VAVL 143
>sp|Q60HD2|ATLA1_MACFA Atlastin-1 OS=Macaca fascicularis GN=ATL1 PE=2 SV=1
Length = 558
Score = 210 bits (534), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 103/146 (70%), Positives = 122/146 (83%), Gaps = 5/146 (3%)
Query: 136 AFRKGKSFLLDFLLRYMNFTYIEEAPSGDWMGPDDVPLEGFSWRGGSERDTTGILMWSHV 195
AFRKGKSFL+DF+LRYM Y +E S DW+G + PL GFSWRGGSER+TTGI +WS V
Sbjct: 75 AFRKGKSFLMDFMLRYM---YNQE--SVDWVGDYNEPLTGFSWRGGSERETTGIQIWSEV 129
Query: 196 YIATLPTGEKAAVILLDTQGTFDSESTVRDCATVFALSTMLSSIQIYNLSQNIQEDDLQH 255
++ P G+K AV+L+DTQGTFDS+ST+RD ATVFALSTM+SSIQ+YNLSQN+QEDDLQH
Sbjct: 130 FLINKPDGKKVAVLLMDTQGTFDSQSTLRDSATVFALSTMISSIQVYNLSQNVQEDDLQH 189
Query: 256 LQLFTEYGRLALADTGTKPFQRLQFL 281
LQLFTEYGRLA+ +T KPFQ L FL
Sbjct: 190 LQLFTEYGRLAMEETFLKPFQSLIFL 215
Score = 134 bits (338), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 68/124 (54%), Positives = 89/124 (71%), Gaps = 5/124 (4%)
Query: 14 EEDSLPQYGAIQIVKSEEKHKFILDYEALERILLQDHVKDKHVVVVSVAGAFRKGKSFLL 73
EE+ + + G +Q++ ++ H F LD AL RILL + V+DK VV VSVAGAFRKGKSFL+
Sbjct: 25 EEEPVKKAGPVQVLIVKDDHSFELDETALNRILLSEAVRDKEVVAVSVAGAFRKGKSFLM 84
Query: 74 DFLLRYMNFTYIEEAPSGDWMGPDDVPLEGFSWRGGSERDTTGILMWSHVYIATLPTGEK 133
DF+LRYM Y +E S DW+G + PL GFSWRGGSER+TTGI +WS V++ P G+K
Sbjct: 85 DFMLRYM---YNQE--SVDWVGDYNEPLTGFSWRGGSERETTGIQIWSEVFLINKPDGKK 139
Query: 134 VSAF 137
V+
Sbjct: 140 VAVL 143
>sp|Q5R4P1|ATLA1_PONAB Atlastin-1 OS=Pongo abelii GN=ATL1 PE=2 SV=2
Length = 558
Score = 209 bits (532), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 102/146 (69%), Positives = 122/146 (83%), Gaps = 5/146 (3%)
Query: 136 AFRKGKSFLLDFLLRYMNFTYIEEAPSGDWMGPDDVPLEGFSWRGGSERDTTGILMWSHV 195
AFRKGKSFL+DF+LRYM Y +E S DW+G + PL GFSWRGGSER+TTGI +WS +
Sbjct: 75 AFRKGKSFLMDFMLRYM---YNQE--SVDWVGDYNEPLTGFSWRGGSERETTGIQIWSEI 129
Query: 196 YIATLPTGEKAAVILLDTQGTFDSESTVRDCATVFALSTMLSSIQIYNLSQNIQEDDLQH 255
++ P G+K AV+L+DTQGTFDS+ST+RD ATVFALSTM+SSIQ+YNLSQN+QEDDLQH
Sbjct: 130 FLINKPDGKKVAVLLMDTQGTFDSQSTLRDSATVFALSTMISSIQVYNLSQNVQEDDLQH 189
Query: 256 LQLFTEYGRLALADTGTKPFQRLQFL 281
LQLFTEYGRLA+ +T KPFQ L FL
Sbjct: 190 LQLFTEYGRLAMEETFLKPFQSLIFL 215
Score = 134 bits (336), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 67/124 (54%), Positives = 89/124 (71%), Gaps = 5/124 (4%)
Query: 14 EEDSLPQYGAIQIVKSEEKHKFILDYEALERILLQDHVKDKHVVVVSVAGAFRKGKSFLL 73
EE+ + + G +Q++ ++ H F LD AL RILL + V+DK VV VSVAGAFRKGKSFL+
Sbjct: 25 EEEPVKKAGPVQVLIVKDDHSFELDETALNRILLSEAVRDKEVVAVSVAGAFRKGKSFLM 84
Query: 74 DFLLRYMNFTYIEEAPSGDWMGPDDVPLEGFSWRGGSERDTTGILMWSHVYIATLPTGEK 133
DF+LRYM Y +E S DW+G + PL GFSWRGGSER+TTGI +WS +++ P G+K
Sbjct: 85 DFMLRYM---YNQE--SVDWVGDYNEPLTGFSWRGGSERETTGIQIWSEIFLINKPDGKK 139
Query: 134 VSAF 137
V+
Sbjct: 140 VAVL 143
>sp|Q8WXF7|ATLA1_HUMAN Atlastin-1 OS=Homo sapiens GN=ATL1 PE=1 SV=1
Length = 558
Score = 209 bits (532), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 102/146 (69%), Positives = 122/146 (83%), Gaps = 5/146 (3%)
Query: 136 AFRKGKSFLLDFLLRYMNFTYIEEAPSGDWMGPDDVPLEGFSWRGGSERDTTGILMWSHV 195
AFRKGKSFL+DF+LRYM Y +E S DW+G + PL GFSWRGGSER+TTGI +WS +
Sbjct: 75 AFRKGKSFLMDFMLRYM---YNQE--SVDWVGDYNEPLTGFSWRGGSERETTGIQIWSEI 129
Query: 196 YIATLPTGEKAAVILLDTQGTFDSESTVRDCATVFALSTMLSSIQIYNLSQNIQEDDLQH 255
++ P G+K AV+L+DTQGTFDS+ST+RD ATVFALSTM+SSIQ+YNLSQN+QEDDLQH
Sbjct: 130 FLINKPDGKKVAVLLMDTQGTFDSQSTLRDSATVFALSTMISSIQVYNLSQNVQEDDLQH 189
Query: 256 LQLFTEYGRLALADTGTKPFQRLQFL 281
LQLFTEYGRLA+ +T KPFQ L FL
Sbjct: 190 LQLFTEYGRLAMEETFLKPFQSLIFL 215
Score = 134 bits (336), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 67/124 (54%), Positives = 89/124 (71%), Gaps = 5/124 (4%)
Query: 14 EEDSLPQYGAIQIVKSEEKHKFILDYEALERILLQDHVKDKHVVVVSVAGAFRKGKSFLL 73
EE+ + + G +Q++ ++ H F LD AL RILL + V+DK VV VSVAGAFRKGKSFL+
Sbjct: 25 EEEPVKKAGPVQVLIVKDDHSFELDETALNRILLSEAVRDKEVVAVSVAGAFRKGKSFLM 84
Query: 74 DFLLRYMNFTYIEEAPSGDWMGPDDVPLEGFSWRGGSERDTTGILMWSHVYIATLPTGEK 133
DF+LRYM Y +E S DW+G + PL GFSWRGGSER+TTGI +WS +++ P G+K
Sbjct: 85 DFMLRYM---YNQE--SVDWVGDYNEPLTGFSWRGGSERETTGIQIWSEIFLINKPDGKK 139
Query: 134 VSAF 137
V+
Sbjct: 140 VAVL 143
>sp|Q6PA06|ATLA2_MOUSE Atlastin-2 OS=Mus musculus GN=Atl2 PE=1 SV=1
Length = 583
Score = 209 bits (532), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 100/165 (60%), Positives = 125/165 (75%), Gaps = 5/165 (3%)
Query: 117 ILMWSHVYIATLPTGEKVSAFRKGKSFLLDFLLRYMNFTYIEEAPSGDWMGPDDVPLEGF 176
IL+ H+ + AFRKGKSFLLDF+LRYM Y +++ S W+G ++ PL GF
Sbjct: 83 ILLQEHIRDLNIVVVSVAGAFRKGKSFLLDFMLRYM---YNKDSQS--WIGGNNEPLTGF 137
Query: 177 SWRGGSERDTTGILMWSHVYIATLPTGEKAAVILLDTQGTFDSESTVRDCATVFALSTML 236
+WRGG ER+TTGI +W+ V++ P G K AV+L+DTQG FDS+ST++DCATVFALSTM
Sbjct: 138 TWRGGCERETTGIQVWNEVFVIDRPNGTKVAVLLMDTQGAFDSQSTIKDCATVFALSTMT 197
Query: 237 SSIQIYNLSQNIQEDDLQHLQLFTEYGRLALADTGTKPFQRLQFL 281
SS+Q+YNLSQNIQEDDLQHLQLFTEYGRLA+ + KPFQ L FL
Sbjct: 198 SSVQVYNLSQNIQEDDLQHLQLFTEYGRLAMEEIYQKPFQTLMFL 242
Score = 135 bits (340), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 70/137 (51%), Positives = 96/137 (70%), Gaps = 13/137 (9%)
Query: 9 MGGDFEEDSL-------PQYGAIQIV-KSEEKHKFILDYEALERILLQDHVKDKHVVVVS 60
+G D+E+D L + +QIV E+ H F LD EALE+ILLQ+H++D ++VVVS
Sbjct: 39 LGEDYEDDDLVNSDEVMKKPCPVQIVLAHEDDHNFELDEEALEQILLQEHIRDLNIVVVS 98
Query: 61 VAGAFRKGKSFLLDFLLRYMNFTYIEEAPSGDWMGPDDVPLEGFSWRGGSERDTTGILMW 120
VAGAFRKGKSFLLDF+LRYM Y +++ S W+G ++ PL GF+WRGG ER+TTGI +W
Sbjct: 99 VAGAFRKGKSFLLDFMLRYM---YNKDSQS--WIGGNNEPLTGFTWRGGCERETTGIQVW 153
Query: 121 SHVYIATLPTGEKVSAF 137
+ V++ P G KV+
Sbjct: 154 NEVFVIDRPNGTKVAVL 170
>sp|Q95LN3|ATLA2_MACFA Atlastin-2 OS=Macaca fascicularis GN=ATL2 PE=2 SV=1
Length = 565
Score = 209 bits (532), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 100/165 (60%), Positives = 125/165 (75%), Gaps = 5/165 (3%)
Query: 117 ILMWSHVYIATLPTGEKVSAFRKGKSFLLDFLLRYMNFTYIEEAPSGDWMGPDDVPLEGF 176
IL+ H+ + AFRKGKSFLLDF+LRYM Y +++ S W+G ++ PL GF
Sbjct: 65 ILLQEHIRDLNIVVVSVAGAFRKGKSFLLDFMLRYM---YNKDSQS--WIGGNNEPLTGF 119
Query: 177 SWRGGSERDTTGILMWSHVYIATLPTGEKAAVILLDTQGTFDSESTVRDCATVFALSTML 236
+WRGG ER+TTGI +W+ V++ P G K AV+L+DTQG FDS+ST++DCATVFALSTM
Sbjct: 120 TWRGGCERETTGIQVWNEVFVIDRPNGTKVAVLLMDTQGAFDSQSTIKDCATVFALSTMT 179
Query: 237 SSIQIYNLSQNIQEDDLQHLQLFTEYGRLALADTGTKPFQRLQFL 281
SS+Q+YNLSQNIQEDDLQHLQLFTEYGRLA+ + KPFQ L FL
Sbjct: 180 SSVQVYNLSQNIQEDDLQHLQLFTEYGRLAMEEIYQKPFQTLMFL 224
Score = 135 bits (339), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 70/139 (50%), Positives = 97/139 (69%), Gaps = 13/139 (9%)
Query: 7 LKMGGDFEEDSL-------PQYGAIQIV-KSEEKHKFILDYEALERILLQDHVKDKHVVV 58
L+ G ++E+D L + +QIV E+ H F LD EALE+ILLQ+H++D ++VV
Sbjct: 19 LRFGENYEDDDLVNSDEVMKKPCPVQIVLAHEDDHNFELDEEALEQILLQEHIRDLNIVV 78
Query: 59 VSVAGAFRKGKSFLLDFLLRYMNFTYIEEAPSGDWMGPDDVPLEGFSWRGGSERDTTGIL 118
VSVAGAFRKGKSFLLDF+LRYM Y +++ S W+G ++ PL GF+WRGG ER+TTGI
Sbjct: 79 VSVAGAFRKGKSFLLDFMLRYM---YNKDSQS--WIGGNNEPLTGFTWRGGCERETTGIQ 133
Query: 119 MWSHVYIATLPTGEKVSAF 137
+W+ V++ P G KV+
Sbjct: 134 VWNEVFVIDRPNGTKVAVL 152
>sp|Q6GN29|ATLA2_XENLA Atlastin-2 OS=Xenopus laevis GN=atl2 PE=2 SV=1
Length = 569
Score = 209 bits (532), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 101/165 (61%), Positives = 121/165 (73%), Gaps = 6/165 (3%)
Query: 117 ILMWSHVYIATLPTGEKVSAFRKGKSFLLDFLLRYMNFTYIEEAPSGDWMGPDDVPLEGF 176
ILM H+ + AFRKGKSFLLDF+LR+M + S W+G + PL GF
Sbjct: 72 ILMQDHIRDLNVVVLSVAGAFRKGKSFLLDFMLRFMY------SQSSSWIGGNYEPLTGF 125
Query: 177 SWRGGSERDTTGILMWSHVYIATLPTGEKAAVILLDTQGTFDSESTVRDCATVFALSTML 236
+WRGG ER+TTGI +WS V++ P G K AVIL+DTQG FDS+ST++DCATVFALSTM
Sbjct: 126 TWRGGCERETTGIQIWSEVFVVEKPDGSKVAVILMDTQGAFDSQSTIKDCATVFALSTMT 185
Query: 237 SSIQIYNLSQNIQEDDLQHLQLFTEYGRLALADTGTKPFQRLQFL 281
SS+Q+YNLSQNIQEDDLQHLQLFTEYGRLA+ + KPFQ L FL
Sbjct: 186 SSVQVYNLSQNIQEDDLQHLQLFTEYGRLAMEEIYKKPFQTLMFL 230
Score = 129 bits (323), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 67/133 (50%), Positives = 89/133 (66%), Gaps = 9/133 (6%)
Query: 6 DLKMGGDFEEDSLPQYGAIQIV-KSEEKHKFILDYEALERILLQDHVKDKHVVVVSVAGA 64
++++ D E P+ IQIV E+ H F LD ALE IL+QDH++D +VVV+SVAGA
Sbjct: 34 EIQLNSDTEVMEKPR--PIQIVLAHEDDHNFELDETALESILMQDHIRDLNVVVLSVAGA 91
Query: 65 FRKGKSFLLDFLLRYMNFTYIEEAPSGDWMGPDDVPLEGFSWRGGSERDTTGILMWSHVY 124
FRKGKSFLLDF+LR+M + S W+G + PL GF+WRGG ER+TTGI +WS V+
Sbjct: 92 FRKGKSFLLDFMLRFMY------SQSSSWIGGNYEPLTGFTWRGGCERETTGIQIWSEVF 145
Query: 125 IATLPTGEKVSAF 137
+ P G KV+
Sbjct: 146 VVEKPDGSKVAVI 158
>sp|Q8NHH9|ATLA2_HUMAN Atlastin-2 OS=Homo sapiens GN=ATL2 PE=1 SV=2
Length = 583
Score = 209 bits (531), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 100/165 (60%), Positives = 125/165 (75%), Gaps = 5/165 (3%)
Query: 117 ILMWSHVYIATLPTGEKVSAFRKGKSFLLDFLLRYMNFTYIEEAPSGDWMGPDDVPLEGF 176
IL+ H+ + AFRKGKSFLLDF+LRYM Y +++ S W+G ++ PL GF
Sbjct: 83 ILLQEHIRDLNIVVVSVAGAFRKGKSFLLDFMLRYM---YNKDSQS--WIGGNNEPLTGF 137
Query: 177 SWRGGSERDTTGILMWSHVYIATLPTGEKAAVILLDTQGTFDSESTVRDCATVFALSTML 236
+WRGG ER+TTGI +W+ V++ P G K AV+L+DTQG FDS+ST++DCATVFALSTM
Sbjct: 138 TWRGGCERETTGIQVWNEVFVIDRPNGTKVAVLLMDTQGAFDSQSTIKDCATVFALSTMT 197
Query: 237 SSIQIYNLSQNIQEDDLQHLQLFTEYGRLALADTGTKPFQRLQFL 281
SS+Q+YNLSQNIQEDDLQHLQLFTEYGRLA+ + KPFQ L FL
Sbjct: 198 SSVQVYNLSQNIQEDDLQHLQLFTEYGRLAMEEIYQKPFQTLMFL 242
Score = 133 bits (335), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/137 (50%), Positives = 96/137 (70%), Gaps = 13/137 (9%)
Query: 9 MGGDFEEDSL-------PQYGAIQIV-KSEEKHKFILDYEALERILLQDHVKDKHVVVVS 60
+G ++E+D L + +QIV E+ H F LD EALE+ILLQ+H++D ++VVVS
Sbjct: 39 LGENYEDDDLVNSDEVMKKPCPVQIVLAHEDDHNFELDEEALEQILLQEHIRDLNIVVVS 98
Query: 61 VAGAFRKGKSFLLDFLLRYMNFTYIEEAPSGDWMGPDDVPLEGFSWRGGSERDTTGILMW 120
VAGAFRKGKSFLLDF+LRYM Y +++ S W+G ++ PL GF+WRGG ER+TTGI +W
Sbjct: 99 VAGAFRKGKSFLLDFMLRYM---YNKDSQS--WIGGNNEPLTGFTWRGGCERETTGIQVW 153
Query: 121 SHVYIATLPTGEKVSAF 137
+ V++ P G KV+
Sbjct: 154 NEVFVIDRPNGTKVAVL 170
>sp|Q91YH5|ATLA3_MOUSE Atlastin-3 OS=Mus musculus GN=Atl3 PE=2 SV=1
Length = 541
Score = 205 bits (522), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 100/171 (58%), Positives = 123/171 (71%), Gaps = 2/171 (1%)
Query: 111 ERDTTGILMWSHVYIATLPTGEKVSAFRKGKSFLLDFLLRYMNFTYIEEAPSGDWMGPDD 170
ER +L+ H+ + AFRKGKSF+LDF+LRY+ +E DW+G +
Sbjct: 43 ERALASVLLQDHIRDLDVVVVSVAGAFRKGKSFILDFMLRYLYSQ--KEGGHSDWLGDPE 100
Query: 171 VPLEGFSWRGGSERDTTGILMWSHVYIATLPTGEKAAVILLDTQGTFDSESTVRDCATVF 230
PL GFSWRGGS+ +TTGI +WS V+ P G+K AV+L+DTQG FDS+STV+DCAT+F
Sbjct: 101 EPLTGFSWRGGSDPETTGIQIWSEVFTVKKPCGKKVAVVLMDTQGAFDSQSTVKDCATIF 160
Query: 231 ALSTMLSSIQIYNLSQNIQEDDLQHLQLFTEYGRLALADTGTKPFQRLQFL 281
ALSTM SS+QIYNLSQNIQEDDLQ LQLFTEYGRLA+ + KPFQ L FL
Sbjct: 161 ALSTMTSSVQIYNLSQNIQEDDLQQLQLFTEYGRLAMDEIFQKPFQTLMFL 211
Score = 127 bits (320), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 66/127 (51%), Positives = 87/127 (68%), Gaps = 5/127 (3%)
Query: 10 GGDFEEDSLPQYGAIQIV-KSEEKHKFILDYEALERILLQDHVKDKHVVVVSVAGAFRKG 68
GD E+ P G +Q+V +E+H F L+ AL +LLQDH++D VVVVSVAGAFRKG
Sbjct: 15 AGDAMENGKP--GPVQVVLVHKEQHSFELEERALASVLLQDHIRDLDVVVVSVAGAFRKG 72
Query: 69 KSFLLDFLLRYMNFTYIEEAPSGDWMGPDDVPLEGFSWRGGSERDTTGILMWSHVYIATL 128
KSF+LDF+LRY+ +E DW+G + PL GFSWRGGS+ +TTGI +WS V+
Sbjct: 73 KSFILDFMLRYLYSQ--KEGGHSDWLGDPEEPLTGFSWRGGSDPETTGIQIWSEVFTVKK 130
Query: 129 PTGEKVS 135
P G+KV+
Sbjct: 131 PCGKKVA 137
>sp|Q8BH66|ATLA1_MOUSE Atlastin-1 OS=Mus musculus GN=Atl1 PE=1 SV=1
Length = 558
Score = 205 bits (522), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 102/146 (69%), Positives = 121/146 (82%), Gaps = 5/146 (3%)
Query: 136 AFRKGKSFLLDFLLRYMNFTYIEEAPSGDWMGPDDVPLEGFSWRGGSERDTTGILMWSHV 195
AFRKGKSFL+DF+LRYM Y +E S DW+G + PL GFSWRGGSER+TTGI +WS V
Sbjct: 75 AFRKGKSFLMDFMLRYM---YNQE--SVDWVGDYNEPLTGFSWRGGSERETTGIQIWSEV 129
Query: 196 YIATLPTGEKAAVILLDTQGTFDSESTVRDCATVFALSTMLSSIQIYNLSQNIQEDDLQH 255
++ G+K AV+L+DTQGTFDS+ST+RD ATVFALSTM+SSIQ+YNLSQN+QEDDLQH
Sbjct: 130 FLINKLDGKKVAVLLMDTQGTFDSQSTLRDSATVFALSTMISSIQVYNLSQNVQEDDLQH 189
Query: 256 LQLFTEYGRLALADTGTKPFQRLQFL 281
LQLFTEYGRLA+ +T KPFQ L FL
Sbjct: 190 LQLFTEYGRLAMEETFLKPFQSLIFL 215
Score = 125 bits (315), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 65/116 (56%), Positives = 82/116 (70%), Gaps = 5/116 (4%)
Query: 22 GAIQIVKSEEKHKFILDYEALERILLQDHVKDKHVVVVSVAGAFRKGKSFLLDFLLRYMN 81
G +Q++ ++ H F LD AL RILL V+DK VV VSVAGAFRKGKSFL+DF+LRYM
Sbjct: 33 GPVQVLIVKDDHSFELDEAALNRILLSQAVRDKEVVAVSVAGAFRKGKSFLMDFMLRYM- 91
Query: 82 FTYIEEAPSGDWMGPDDVPLEGFSWRGGSERDTTGILMWSHVYIATLPTGEKVSAF 137
Y +E S DW+G + PL GFSWRGGSER+TTGI +WS V++ G+KV+
Sbjct: 92 --YNQE--SVDWVGDYNEPLTGFSWRGGSERETTGIQIWSEVFLINKLDGKKVAVL 143
>sp|Q6PST4|ATLA1_RAT Atlastin-1 OS=Rattus norvegicus GN=Atl1 PE=1 SV=1
Length = 558
Score = 205 bits (521), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 102/146 (69%), Positives = 121/146 (82%), Gaps = 5/146 (3%)
Query: 136 AFRKGKSFLLDFLLRYMNFTYIEEAPSGDWMGPDDVPLEGFSWRGGSERDTTGILMWSHV 195
AFRKGKSFL+DF+LRYM Y +E S DW+G + PL GFSWRGGSER+TTGI +WS V
Sbjct: 75 AFRKGKSFLMDFMLRYM---YNQE--SVDWVGDYNEPLTGFSWRGGSERETTGIQIWSEV 129
Query: 196 YIATLPTGEKAAVILLDTQGTFDSESTVRDCATVFALSTMLSSIQIYNLSQNIQEDDLQH 255
++ G+K AV+L+DTQGTFDS+ST+RD ATVFALSTM+SSIQ+YNLSQN+QEDDLQH
Sbjct: 130 FLINKLDGKKVAVLLMDTQGTFDSQSTLRDSATVFALSTMISSIQVYNLSQNVQEDDLQH 189
Query: 256 LQLFTEYGRLALADTGTKPFQRLQFL 281
LQLFTEYGRLA+ +T KPFQ L FL
Sbjct: 190 LQLFTEYGRLAMEETFLKPFQSLIFL 215
Score = 126 bits (317), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/116 (56%), Positives = 83/116 (71%), Gaps = 5/116 (4%)
Query: 22 GAIQIVKSEEKHKFILDYEALERILLQDHVKDKHVVVVSVAGAFRKGKSFLLDFLLRYMN 81
G +Q++ ++ H F LD AL RILL + V+DK VV VSVAGAFRKGKSFL+DF+LRYM
Sbjct: 33 GPVQVLIVKDDHSFELDEAALNRILLSEAVRDKEVVAVSVAGAFRKGKSFLMDFMLRYM- 91
Query: 82 FTYIEEAPSGDWMGPDDVPLEGFSWRGGSERDTTGILMWSHVYIATLPTGEKVSAF 137
Y +E S DW+G + PL GFSWRGGSER+TTGI +WS V++ G+KV+
Sbjct: 92 --YNQE--SVDWVGDYNEPLTGFSWRGGSERETTGIQIWSEVFLINKLDGKKVAVL 143
>sp|Q6DD88|ATLA3_HUMAN Atlastin-3 OS=Homo sapiens GN=ATL3 PE=1 SV=1
Length = 541
Score = 202 bits (515), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 99/171 (57%), Positives = 124/171 (72%), Gaps = 2/171 (1%)
Query: 111 ERDTTGILMWSHVYIATLPTGEKVSAFRKGKSFLLDFLLRYMNFTYIEEAPSGDWMGPDD 170
E+ IL+ H+ + AFRKGKSF+LDF+LRY+ +E+ +W+G +
Sbjct: 43 EKALASILLQDHIRDLDVVVVSVAGAFRKGKSFILDFMLRYLYSQ--KESGHSNWLGDPE 100
Query: 171 VPLEGFSWRGGSERDTTGILMWSHVYIATLPTGEKAAVILLDTQGTFDSESTVRDCATVF 230
PL GFSWRGGS+ +TTGI +WS V+ P G+K AV+L+DTQG FDS+STV+DCAT+F
Sbjct: 101 EPLTGFSWRGGSDPETTGIQIWSEVFTVEKPGGKKVAVVLMDTQGAFDSQSTVKDCATIF 160
Query: 231 ALSTMLSSIQIYNLSQNIQEDDLQHLQLFTEYGRLALADTGTKPFQRLQFL 281
ALSTM SS+QIYNLSQNIQEDDLQ LQLFTEYGRLA+ + KPFQ L FL
Sbjct: 161 ALSTMTSSVQIYNLSQNIQEDDLQQLQLFTEYGRLAMDEIFQKPFQTLMFL 211
Score = 125 bits (314), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 66/125 (52%), Positives = 88/125 (70%), Gaps = 5/125 (4%)
Query: 12 DFEEDSLPQYGAIQIV-KSEEKHKFILDYEALERILLQDHVKDKHVVVVSVAGAFRKGKS 70
D E S P G +Q+V +++H F LD +AL ILLQDH++D VVVVSVAGAFRKGKS
Sbjct: 17 DAMESSKP--GPVQVVLVQKDQHSFELDEKALASILLQDHIRDLDVVVVSVAGAFRKGKS 74
Query: 71 FLLDFLLRYMNFTYIEEAPSGDWMGPDDVPLEGFSWRGGSERDTTGILMWSHVYIATLPT 130
F+LDF+LRY+ +E+ +W+G + PL GFSWRGGS+ +TTGI +WS V+ P
Sbjct: 75 FILDFMLRYLYSQ--KESGHSNWLGDPEEPLTGFSWRGGSDPETTGIQIWSEVFTVEKPG 132
Query: 131 GEKVS 135
G+KV+
Sbjct: 133 GKKVA 137
>sp|Q0ZHH6|ATLA3_RAT Atlastin-3 OS=Rattus norvegicus GN=Atl3 PE=2 SV=2
Length = 541
Score = 202 bits (513), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 99/171 (57%), Positives = 125/171 (73%), Gaps = 2/171 (1%)
Query: 111 ERDTTGILMWSHVYIATLPTGEKVSAFRKGKSFLLDFLLRYMNFTYIEEAPSGDWMGPDD 170
ER +L+ H+ + AFRKGKSF+LDF+LRY+ ++ E S +W+G +
Sbjct: 43 ERALASVLLQDHIRDLDVVVVSVAGAFRKGKSFILDFMLRYL-YSQKEHGHS-NWLGDPE 100
Query: 171 VPLEGFSWRGGSERDTTGILMWSHVYIATLPTGEKAAVILLDTQGTFDSESTVRDCATVF 230
PL GFSWRGGS+ +TTGI +WS V+ P G++ AV+L+DTQG FDS+STV+DCAT+F
Sbjct: 101 EPLTGFSWRGGSDPETTGIQIWSEVFTVKKPCGKEVAVVLMDTQGAFDSQSTVKDCATIF 160
Query: 231 ALSTMLSSIQIYNLSQNIQEDDLQHLQLFTEYGRLALADTGTKPFQRLQFL 281
ALSTM SS+QIYNLSQNIQEDDLQ LQLFTEYGRLA+ + KPFQ L FL
Sbjct: 161 ALSTMTSSVQIYNLSQNIQEDDLQQLQLFTEYGRLAMDEIFQKPFQTLMFL 211
Score = 124 bits (311), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 65/127 (51%), Positives = 89/127 (70%), Gaps = 5/127 (3%)
Query: 10 GGDFEEDSLPQYGAIQIV-KSEEKHKFILDYEALERILLQDHVKDKHVVVVSVAGAFRKG 68
GD E+ P G +Q+V +E+H F L+ AL +LLQDH++D VVVVSVAGAFRKG
Sbjct: 15 AGDAMENGKP--GPVQVVLVHKEQHSFELEERALASVLLQDHIRDLDVVVVSVAGAFRKG 72
Query: 69 KSFLLDFLLRYMNFTYIEEAPSGDWMGPDDVPLEGFSWRGGSERDTTGILMWSHVYIATL 128
KSF+LDF+LRY+ ++ E S +W+G + PL GFSWRGGS+ +TTGI +WS V+
Sbjct: 73 KSFILDFMLRYL-YSQKEHGHS-NWLGDPEEPLTGFSWRGGSDPETTGIQIWSEVFTVKK 130
Query: 129 PTGEKVS 135
P G++V+
Sbjct: 131 PCGKEVA 137
>sp|O70418|RN112_RAT RING finger protein 112 OS=Rattus norvegicus GN=Rnf112 PE=2 SV=1
Length = 631
Score = 72.0 bits (175), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/143 (37%), Positives = 71/143 (49%), Gaps = 9/143 (6%)
Query: 140 GKSFLLDFLLRYMNFTYIEEAPSGDWMGPD-DVPLEGFSWRGGSERDTTGILMWSHVYIA 198
GKSFLLD LLR +E SGD P + L G W G+ T GI MWSH ++
Sbjct: 181 GKSFLLDHLLR--GLPGLE---SGDSTRPRAEGSLPGIRW--GANGLTRGIWMWSHPFLL 233
Query: 199 TLPTGEKAAVILLDTQGTFDSESTVRDCATVFALSTMLSSIQIYNLSQNIQEDDLQHLQL 258
G+K AV L+DT E + + AL+ MLSS QI N SQ +++ DL +L++
Sbjct: 234 G-KEGKKVAVFLVDTGDVMSPELSRETRVKLCALTMMLSSYQILNTSQELKDTDLGYLEM 292
Query: 259 FTEYGRLALADTGTKPFQRLQFL 281
F + G P Q L L
Sbjct: 293 FVHVAEVMGKHYGMVPIQHLDLL 315
>sp|Q96DY5|RN112_MOUSE RING finger protein 112 OS=Mus musculus GN=Rnf112 PE=2 SV=1
Length = 654
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 68/142 (47%), Gaps = 7/142 (4%)
Query: 140 GKSFLLDFLLRYMNFTYIEEAPSGDWMGPDDVPLEGFSWRGGSERDTTGILMWSHVYIAT 199
GKSFLLD LL +E SG +P G W G+ T GI MWSH ++
Sbjct: 204 GKSFLLDHLL--SGLPSLESGDSGRPRAEGSLP--GIRW--GANGLTRGIWMWSHPFLLG 257
Query: 200 LPTGEKAAVILLDTQGTFDSESTVRDCATVFALSTMLSSIQIYNLSQNIQEDDLQHLQLF 259
G+K AV L+DT E + + AL+ MLSS QI N SQ +++ DL +L++F
Sbjct: 258 -KEGKKVAVFLVDTGDVMSPELSKETRVKLCALTMMLSSYQILNTSQELKDTDLGYLEMF 316
Query: 260 TEYGRLALADTGTKPFQRLQFL 281
+ G P Q L L
Sbjct: 317 VHVAEVMGKHYGMVPIQHLDLL 338
Score = 48.5 bits (114), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 48/103 (46%), Gaps = 7/103 (6%)
Query: 35 FILDYEALERILLQDHVKDKHVVVVSVAGAFRKGKSFLLDFLLRYMNFTYIEEAPSGDWM 94
IL A+ R L +D V +++V G GKSFLLD LL +E SG
Sbjct: 171 LILRMGAINRCLKHPLARDTPVCLLAVLGEQHSGKSFLLDHLL--SGLPSLESGDSGRPR 228
Query: 95 GPDDVPLEGFSWRGGSERDTTGILMWSHVYIATLPTGEKVSAF 137
+P G W G+ T GI MWSH ++ G+KV+ F
Sbjct: 229 AEGSLP--GIRW--GANGLTRGIWMWSHPFLLG-KEGKKVAVF 266
>sp|Q08DF2|RN112_BOVIN RING finger protein 112 OS=Bos taurus GN=RNF112 PE=2 SV=1
Length = 628
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 69/143 (48%), Gaps = 9/143 (6%)
Query: 140 GKSFLLDFLLRYMNFTYIEEAPSGDWMGPDDV-PLEGFSWRGGSERDTTGILMWSHVYIA 198
GK+FLL+ LL+ + E G W P +GF W G+ + GI MWSH ++
Sbjct: 182 GKTFLLNHLLQGLPGLASGE---GSW--PRSAGSGQGFRW--GANGLSRGIWMWSHPFLL 234
Query: 199 TLPTGEKAAVILLDTQGTFDSESTVRDCATVFALSTMLSSIQIYNLSQNIQEDDLQHLQL 258
G K AV L+DT E + + AL++MLSS QI SQ +++ DL+HL+
Sbjct: 235 G-KEGRKVAVFLVDTGDVMSPELSRETRTRLCALTSMLSSYQILTASQELKDTDLEHLET 293
Query: 259 FTEYGRLALADTGTKPFQRLQFL 281
F + G P Q L L
Sbjct: 294 FVHVAEVMGRHYGMVPIQHLDLL 316
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 52/113 (46%), Gaps = 9/113 (7%)
Query: 26 IVKSEEKHKFILDYEALERILLQDHVKDKHVVVVSVAGAFRKGKSFLLDFLLRYMNFTYI 85
+V+ IL A+ R L +D V +++V G GK+FLL+ LL+ +
Sbjct: 140 LVRINASGGLILRMGAINRCLKHPLARDTPVCLLAVLGGPHSGKTFLLNHLLQGLPGLAS 199
Query: 86 EEAPSGDWMGPDDV-PLEGFSWRGGSERDTTGILMWSHVYIATLPTGEKVSAF 137
E G W P +GF W G+ + GI MWSH ++ G KV+ F
Sbjct: 200 GE---GSW--PRSAGSGQGFRW--GANGLSRGIWMWSHPFLLG-KEGRKVAVF 244
>sp|Q9ULX5|RN112_HUMAN RING finger protein 112 OS=Homo sapiens GN=RNF112 PE=2 SV=2
Length = 631
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 70/142 (49%), Gaps = 6/142 (4%)
Query: 140 GKSFLLDFLLRYMNFTYIEEAPSGDWMGPDDVPLEGFSWRGGSERDTTGILMWSHVYIAT 199
GKSFLL+ LL+ + E+ G + L+G W G+ GI MWSH ++
Sbjct: 181 GKSFLLNHLLQGLPGL---ESGEGGRPRGGEASLQGCRW--GANGLARGIWMWSHPFLLG 235
Query: 200 LPTGEKAAVILLDTQGTFDSESTVRDCATVFALSTMLSSIQIYNLSQNIQEDDLQHLQLF 259
G+K AV L+DT E + + AL+TMLSS QI + SQ +++ DL +L++F
Sbjct: 236 -KEGKKVAVFLVDTGDAMSPELSRETRIKLCALTTMLSSYQILSTSQELKDTDLDYLEMF 294
Query: 260 TEYGRLALADTGTKPFQRLQFL 281
+ G P Q L L
Sbjct: 295 VHVAEVMGKHYGMVPIQHLDLL 316
>sp|Q96PP9|GBP4_HUMAN Guanylate-binding protein 4 OS=Homo sapiens GN=GBP4 PE=1 SV=2
Length = 640
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 62/142 (43%), Gaps = 26/142 (18%)
Query: 134 VSAFRKGKSFLLDFLLRYMNFTYIEEAPSGDWMGPDDVPLEGFSWRGGSERDTTGILMWS 193
V +R GKS+L++ L N GF + +T GI MW
Sbjct: 59 VGLYRTGKSYLMNRLAGKRN---------------------GFPLGSTVQSETKGIWMWC 97
Query: 194 HVYIATLPTGEKAAVILLDTQGTFDSE-STVRDCATVFALSTMLSSIQIYNLSQNIQEDD 252
+++ P ++LLDT+G D E S ++ + +FAL+ +LSS +YN I
Sbjct: 98 VPHLSK-PNH---TLVLLDTEGLGDVEKSNPKNDSWIFALAVLLSSSFVYNSVSTINHQA 153
Query: 253 LQHLQLFTEYGRLALADTGTKP 274
L+ L TE L A + +P
Sbjct: 154 LEQLHYVTELAELIRAKSCPRP 175
>sp|Q61107|GBP4_MOUSE Guanylate-binding protein 4 OS=Mus musculus GN=Gbp4 PE=1 SV=1
Length = 620
Score = 47.8 bits (112), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 50/100 (50%), Gaps = 5/100 (5%)
Query: 175 GFSWRGGSERDTTGILMWSHVYIATLPTGEKAAVILLDTQGTFDSES-TVRDCATVFALS 233
GFS + +T GI MW + PT ++LLDT+G D E ++ + +FAL+
Sbjct: 58 GFSLGSTVQSETKGIWMWCVPH----PTKPTHTLVLLDTEGLGDVEKGDPKNDSWIFALA 113
Query: 234 TMLSSIQIYNLSQNIQEDDLQHLQLFTEYGRLALADTGTK 273
+LSS +YN I + L+ L TE +L A + +
Sbjct: 114 VLLSSTFVYNSMSTINQQALEQLHFVTELTQLIRAKSSPR 153
>sp|Q5R9T9|GBP6_PONAB Guanylate-binding protein 6 OS=Pongo abelii GN=GBP6 PE=2 SV=1
Length = 633
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 60/142 (42%), Gaps = 26/142 (18%)
Query: 134 VSAFRKGKSFLLDFLLRYMNFTYIEEAPSGDWMGPDDVPLEGFSWRGGSERDTTGILMWS 193
V +R GKS+L++ L G + GF + +T GI MW
Sbjct: 44 VGLYRTGKSYLMNHL-----------------AGQN----HGFPLGSTVQSETKGIWMWC 82
Query: 194 HVYIATLPTGEKAAVILLDTQGTFDSES-TVRDCATVFALSTMLSSIQIYNLSQNIQEDD 252
+ P+ ++LLDT+G D E ++ + +FAL+ +L S IYN I
Sbjct: 83 VPH----PSKPNHTLVLLDTEGLGDVEKGDPKNDSWIFALAVLLCSTFIYNSMSTINHQA 138
Query: 253 LQHLQLFTEYGRLALADTGTKP 274
L+ L TE L A + +P
Sbjct: 139 LEQLHYVTELTELIKAKSSPRP 160
>sp|Q8N8V2|GBP7_HUMAN Guanylate-binding protein 7 OS=Homo sapiens GN=GBP7 PE=2 SV=2
Length = 638
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 62/142 (43%), Gaps = 26/142 (18%)
Query: 134 VSAFRKGKSFLLDFLLRYMNFTYIEEAPSGDWMGPDDVPLEGFSWRGGSERDTTGILMWS 193
V +R GKS+L++ L G + +GF + +T GI MW
Sbjct: 44 VGLYRTGKSYLMNKL-----------------AGKN----KGFPLGCTVKSETKGIWMWC 82
Query: 194 HVYIATLPTGEKAAVILLDTQGTFDSE-STVRDCATVFALSTMLSSIQIYNLSQNIQEDD 252
+ P+ +ILLDT+G D E S + + +FAL+ +LSS +YN I
Sbjct: 83 VPH----PSKPNHTLILLDTEGLGDMEKSDPKSDSWIFALAVLLSSSFVYNSMGTINHQA 138
Query: 253 LQHLQLFTEYGRLALADTGTKP 274
L+ L TE L A + +P
Sbjct: 139 LEQLHYVTELTELIRAKSCPRP 160
>sp|Q6ZN66|GBP6_HUMAN Guanylate-binding protein 6 OS=Homo sapiens GN=GBP6 PE=2 SV=1
Length = 633
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 60/142 (42%), Gaps = 26/142 (18%)
Query: 134 VSAFRKGKSFLLDFLLRYMNFTYIEEAPSGDWMGPDDVPLEGFSWRGGSERDTTGILMWS 193
V +R GKS+L++ L G + GF + +T GI MW
Sbjct: 44 VGLYRTGKSYLMNHL-----------------AGQN----HGFPLGSTVQSETKGIWMWC 82
Query: 194 HVYIATLPTGEKAAVILLDTQGTFDSES-TVRDCATVFALSTMLSSIQIYNLSQNIQEDD 252
+ P+ ++LLDT+G D E ++ + +FAL+ +L S +YN I
Sbjct: 83 VPH----PSKPNHTLVLLDTEGLGDVEKGDPKNDSWIFALAVLLCSTFVYNSMSTINHQA 138
Query: 253 LQHLQLFTEYGRLALADTGTKP 274
L+ L TE L A + +P
Sbjct: 139 LEQLHYVTELTELIKAKSSPRP 160
>sp|Q01514|GBP1_MOUSE Interferon-induced guanylate-binding protein 1 OS=Mus musculus
GN=Gbp1 PE=1 SV=1
Length = 589
Score = 42.4 bits (98), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 44/91 (48%), Gaps = 11/91 (12%)
Query: 175 GFSWRGGSERDTTGILMWSHVYIATLPTGEKA--AVILLDTQGTFDSES--TVRDCATVF 230
GFS + T GI MW +P +KA ++LLDT+G D E DC +F
Sbjct: 64 GFSLGSTVQSHTKGIWMW------CVPHPKKAGQTLVLLDTEGLEDVEKGDNQNDCW-IF 116
Query: 231 ALSTMLSSIQIYNLSQNIQEDDLQHLQLFTE 261
AL+ +LSS IYN I + + L TE
Sbjct: 117 ALAVLLSSTFIYNSIGTINQQAMDQLHYVTE 147
>sp|Q9Z0E6|GBP2_MOUSE Interferon-induced guanylate-binding protein 2 OS=Mus musculus
GN=Gbp2 PE=1 SV=1
Length = 589
Score = 42.0 bits (97), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 44/91 (48%), Gaps = 11/91 (12%)
Query: 175 GFSWRGGSERDTTGILMWSHVYIATLPTGEKA--AVILLDTQGTFDSES--TVRDCATVF 230
GFS + T GI MW +P +KA ++LLDT+G D E DC +F
Sbjct: 64 GFSLGSTVQSHTKGIWMW------CVPHPKKAGQTLVLLDTEGLEDVEKGDNQNDCW-IF 116
Query: 231 ALSTMLSSIQIYNLSQNIQEDDLQHLQLFTE 261
AL+ +LSS IYN I + + L TE
Sbjct: 117 ALAVLLSSTFIYNSIGTINQQAMDQLHYVTE 147
>sp|Q63663|GBP2_RAT Interferon-induced guanylate-binding protein 2 OS=Rattus norvegicus
GN=Gbp2 PE=1 SV=2
Length = 589
Score = 42.0 bits (97), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 44/91 (48%), Gaps = 11/91 (12%)
Query: 175 GFSWRGGSERDTTGILMWSHVYIATLPTGEKA--AVILLDTQGTFDSES--TVRDCATVF 230
GFS + T GI MW +P +KA ++LLDT+G D E DC +F
Sbjct: 64 GFSLGSTVQSHTKGIWMW------CVPHPKKAGQTLVLLDTEGLEDVEKGDNQNDCW-IF 116
Query: 231 ALSTMLSSIQIYNLSQNIQEDDLQHLQLFTE 261
AL+ +LSS +YN I + + L TE
Sbjct: 117 ALAVLLSSTFVYNSMGTINQQAMDQLHYVTE 147
>sp|P32456|GBP2_HUMAN Interferon-induced guanylate-binding protein 2 OS=Homo sapiens
GN=GBP2 PE=1 SV=3
Length = 591
Score = 41.2 bits (95), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 54/129 (41%), Gaps = 26/129 (20%)
Query: 134 VSAFRKGKSFLLDFLLRYMNFTYIEEAPSGDWMGPDDVPLEGFSWRGGSERDTTGILMWS 193
V +R GKS+L++ L N GFS + T GI MW
Sbjct: 44 VGLYRTGKSYLMNKLAGKKN---------------------GFSLGSTVKSHTKGIWMWC 82
Query: 194 HVYIATLPTGEKAAVILLDTQGTFDSESTVRDCAT-VFALSTMLSSIQIYNLSQNIQEDD 252
+ P + ++LLDT+G D E + + +FAL+ +LSS +YN I +
Sbjct: 83 VPH----PKKPEHTLVLLDTEGLGDIEKGDNENDSWIFALAILLSSTFVYNSMGTINQQA 138
Query: 253 LQHLQLFTE 261
+ L TE
Sbjct: 139 MDQLHYVTE 147
>sp|Q8CFB4|GBP5_MOUSE Guanylate-binding protein 5 OS=Mus musculus GN=Gbp5 PE=1 SV=2
Length = 590
Score = 38.1 bits (87), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 55/129 (42%), Gaps = 26/129 (20%)
Query: 134 VSAFRKGKSFLLDFLLRYMNFTYIEEAPSGDWMGPDDVPLEGFSWRGGSERDTTGILMWS 193
V +R GKS+L++ L G + +GFS + T GI MW
Sbjct: 44 VGLYRTGKSYLMNKL-----------------AGKE----KGFSVGSTVQSHTKGIWMWC 82
Query: 194 HVYIATLPTGEKAAVILLDTQGTFDSESTVRDCAT-VFALSTMLSSIQIYNLSQNIQEDD 252
+ P ++LLDT+G D E + T +FAL+ +LSS +YN I +
Sbjct: 83 VPH----PQKPDHTLVLLDTEGLGDVEKDDKKNDTQIFALAILLSSTFVYNTMNKIDQGA 138
Query: 253 LQHLQLFTE 261
+ L TE
Sbjct: 139 IDLLHNVTE 147
>sp|Q5D1D6|GBP1_CHLAE Interferon-induced guanylate-binding protein 1 OS=Chlorocebus
aethiops GN=GBP1 PE=2 SV=1
Length = 590
Score = 37.7 bits (86), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 5/89 (5%)
Query: 174 EGFSWRGGSERDTTGILMWSHVYIATLPTGEKAAVILLDTQGTFDSES-TVRDCATVFAL 232
+GFS + T GI MW + P ++LLDT+G D E ++ + +FAL
Sbjct: 63 KGFSLGSTVQSHTKGIWMWCVPH----PKKPGHVLVLLDTEGLGDVEKGDNQNDSWIFAL 118
Query: 233 STMLSSIQIYNLSQNIQEDDLQHLQLFTE 261
+ +LSS +YN I + + L TE
Sbjct: 119 AILLSSTFVYNSMGTINQQAMDQLHYVTE 147
>sp|Q96PP8|GBP5_HUMAN Guanylate-binding protein 5 OS=Homo sapiens GN=GBP5 PE=1 SV=1
Length = 586
Score = 37.0 bits (84), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 57/136 (41%), Gaps = 26/136 (19%)
Query: 134 VSAFRKGKSFLLDFLLRYMNFTYIEEAPSGDWMGPDDVPLEGFSWRGGSERDTTGILMWS 193
V +R GKS+L++ L G + +GFS + T GI +W
Sbjct: 44 VGLYRTGKSYLMNKL-----------------AGKN----KGFSVASTVQSHTKGIWIWC 82
Query: 194 HVYIATLPTGEKAAVILLDTQGTFDSEST-VRDCATVFALSTMLSSIQIYNLSQNIQEDD 252
+ P ++LLDT+G D E ++ +FAL+ +LSS +YN I +
Sbjct: 83 VPH----PNWPNHTLVLLDTEGLGDVEKADNKNDIQIFALALLLSSTFVYNTVNKIDQGA 138
Query: 253 LQHLQLFTEYGRLALA 268
+ L TE L A
Sbjct: 139 IDLLHNVTELTDLLKA 154
>sp|Q5RBE1|GBP1_PONAB Interferon-induced guanylate-binding protein 1 OS=Pongo abelii
GN=GBP1 PE=2 SV=1
Length = 592
Score = 36.2 bits (82), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 5/89 (5%)
Query: 174 EGFSWRGGSERDTTGILMWSHVYIATLPTGEKAAVILLDTQGTFDSES-TVRDCATVFAL 232
+GFS + T GI MW + P ++LLDT+G D E ++ + +FAL
Sbjct: 63 KGFSLGSTVQSHTKGIWMWCVPH----PKKPGHILVLLDTEGLGDVEKGDNQNDSWIFAL 118
Query: 233 STMLSSIQIYNLSQNIQEDDLQHLQLFTE 261
+ +LSS +YN I + + L TE
Sbjct: 119 AVLLSSTFVYNSIGTINQQAMDQLYYVTE 147
>sp|P32455|GBP1_HUMAN Interferon-induced guanylate-binding protein 1 OS=Homo sapiens
GN=GBP1 PE=1 SV=2
Length = 592
Score = 36.2 bits (82), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 5/89 (5%)
Query: 174 EGFSWRGGSERDTTGILMWSHVYIATLPTGEKAAVILLDTQGTFDSES-TVRDCATVFAL 232
+GFS + T GI MW + P ++LLDT+G D E ++ + +FAL
Sbjct: 63 KGFSLGSTVQSHTKGIWMWCVPH----PKKPGHILVLLDTEGLGDVEKGDNQNDSWIFAL 118
Query: 233 STMLSSIQIYNLSQNIQEDDLQHLQLFTE 261
+ +LSS +YN I + + L TE
Sbjct: 119 AVLLSSTFVYNSIGTINQQAMDQLYYVTE 147
>sp|P47271|Y025_MYCGE Uncharacterized glycosyltransferase MG025 OS=Mycoplasma
genitalium (strain ATCC 33530 / G-37 / NCTC 10195)
GN=MG025 PE=3 SV=1
Length = 298
Score = 36.2 bits (82), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 12/76 (15%)
Query: 18 LPQYGAIQIVKSEEKHKFILDYEALERILLQDHVKDKHVVVVSVAGAFRKGKSFLLDFLL 77
+P Y Q +K +AL+ +LLQ+ K V++ G+ K + D+L+
Sbjct: 11 IPTYNCCQYIK-----------KALDSLLLQNEYFLKTQVLIVNDGSLDNTKEVVSDYLI 59
Query: 78 RYMNFTYIEEAPSGDW 93
+Y N +Y E+ +G+W
Sbjct: 60 KYSNISYFEKT-NGNW 74
>sp|Q9H0R5|GBP3_HUMAN Guanylate-binding protein 3 OS=Homo sapiens GN=GBP3 PE=2 SV=3
Length = 595
Score = 35.8 bits (81), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 56/129 (43%), Gaps = 26/129 (20%)
Query: 134 VSAFRKGKSFLLDFLLRYMNFTYIEEAPSGDWMGPDDVPLEGFSWRGGSERDTTGILMWS 193
V +R GKS+L++ L G + +GFS + T GI MW
Sbjct: 44 VGLYRTGKSYLMNKL-----------------AGKN----KGFSLGSTVKSHTKGIWMWC 82
Query: 194 HVYIATLPTGEKAAVILLDTQGTFD-SESTVRDCATVFALSTMLSSIQIYNLSQNIQEDD 252
+ P + ++LLDT+G D + ++ + +F L+ +LSS +YN I +
Sbjct: 83 VPH----PKKPEHTLVLLDTEGLGDVKKGDNQNDSWIFTLAVLLSSTLVYNSMGTINQQA 138
Query: 253 LQHLQLFTE 261
+ L TE
Sbjct: 139 MDQLYYVTE 147
>sp|D7CFN7|AGAL_STRBB Probable retaining alpha-galactosidase OS=Streptomyces
bingchenggensis (strain BCW-1) GN=SBI_01652 PE=3 SV=1
Length = 635
Score = 33.9 bits (76), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 9/88 (10%)
Query: 137 FRKGKSFLLDFLLRYMN----FTYIEEAPSGDWMGPDD---VPLEGFSWRGGSERDTTGI 189
FR D ++R + + Y+ SGD +G +P + +W G RD +
Sbjct: 124 FRGDGGARFDLVVRVSDDGVAYRYVLPKGSGDVLGETSAFTLPTDATAWLGAYRRDNENL 183
Query: 190 LMWSHVYIATLPTGEKAAVILLDTQGTF 217
+ AT PTGE A L +T+GT+
Sbjct: 184 F--NQYPAATAPTGEYMAQALFETRGTY 209
>sp|Q0CTS9|P20D1_ASPTN Probable carboxypeptidase ATEG_02905 OS=Aspergillus terreus (strain
NIH 2624 / FGSC A1156) GN=ATEG_02905 PE=3 SV=1
Length = 433
Score = 33.5 bits (75), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Query: 56 VVVVSVAGAFRKGKSFLLDFLLRYMNFTYIEEA-PSGDWMGPDDVPLEGFSWRGGSERDT 114
V + S++G RK F+ +FL + NFT +++ PS D PD+ F++ G+
Sbjct: 68 VQISSISGHERKAGDFVAEFLQAH-NFTVVKQPVPSKDGRQPDEDRFNVFAYPSGASA-A 125
Query: 115 TGILMWSHVYIATLPTGEKVSAFR 138
IL+ SH I T+P SA R
Sbjct: 126 PKILLTSH--IDTVPPFIPYSAAR 147
>sp|Q7PCK7|XRRA1_BOVIN X-ray radiation resistance-associated protein 1 (Fragment) OS=Bos
taurus GN=XRRA1 PE=2 SV=2
Length = 549
Score = 33.1 bits (74), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
Query: 34 KFILDYEALERILLQDHVKDKHVVVVSVAGAFRKGKSFLLD----FLLRYMNFTYIEEAP 89
++IL + ALE ++L D+ VS+AG ++ K LD F + Y+ + +
Sbjct: 30 RYILRFPALETLMLDDNKLSNPNCFVSLAG-LKRLKKLSLDQNRIFRIPYLQQVQLRDG- 87
Query: 90 SGDWMG 95
SGDW+G
Sbjct: 88 SGDWVG 93
>sp|B8CKH3|IF2_SHEPW Translation initiation factor IF-2 OS=Shewanella piezotolerans
(strain WP3 / JCM 13877) GN=infB PE=3 SV=1
Length = 900
Score = 32.0 bits (71), Expect = 5.1, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 5/77 (6%)
Query: 7 LKMGGDFEEDSLPQYGAIQIVKSEEKHKFILDYE-ALERILLQDHVKDKHV----VVVSV 61
+KMG + + Q+V E HK IL E LE +L D D V VV++
Sbjct: 348 MKMGSMVTINQVLDQETAQLVAEEMGHKVILTRENELEHQVLADRNGDVKVEPRAPVVTI 407
Query: 62 AGAFRKGKSFLLDFLLR 78
G GK+ LLD++ R
Sbjct: 408 MGHVDHGKTSLLDYIRR 424
>sp|A8H740|IF2_SHEPA Translation initiation factor IF-2 OS=Shewanella pealeana (strain
ATCC 700345 / ANG-SQ1) GN=infB PE=3 SV=1
Length = 896
Score = 32.0 bits (71), Expect = 5.1, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 5/77 (6%)
Query: 7 LKMGGDFEEDSLPQYGAIQIVKSEEKHKFILDYE-ALERILLQDHVKDKHV----VVVSV 61
+KMG + + Q+V E HK IL E LE +L D D V VV++
Sbjct: 344 MKMGSMVTINQVLDQETAQLVAEEMGHKVILTRENELEHQVLADRNGDVKVEPRAPVVTI 403
Query: 62 AGAFRKGKSFLLDFLLR 78
G GK+ LLD++ R
Sbjct: 404 MGHVDHGKTSLLDYIRR 420
>sp|Q7MYY7|IF2_PHOLL Translation initiation factor IF-2 OS=Photorhabdus luminescens
subsp. laumondii (strain TT01) GN=infB PE=3 SV=1
Length = 909
Score = 31.6 bits (70), Expect = 6.3, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 6/76 (7%)
Query: 7 LKMGGDFEEDSLPQYGAIQIVKSEEKHKFILDYE-ALERILLQDH-----VKDKHVVVVS 60
+KMG + + Q+V E HK IL E LE L+ D V + VV+
Sbjct: 355 MKMGAMATINQVIDQETAQLVAEEMGHKVILRRENELEEALMSDRDTGEAVAEPRAPVVT 414
Query: 61 VAGAFRKGKSFLLDFL 76
+ G GK+ LLD++
Sbjct: 415 IMGHVDHGKTSLLDYI 430
>sp|Q689D1|TLR2_CANFA Toll-like receptor 2 OS=Canis familiaris GN=TLR2 PE=2 SV=1
Length = 785
Score = 31.2 bits (69), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 6/101 (5%)
Query: 185 DTTGILMWSHVYIATLPTGEKAAVILLDTQG---TFDSESTVRDCATVFALSTMLSSIQI 241
D TG+ + ++P+G AAV LD T+ S +RDC + AL + I
Sbjct: 32 DPTGVCDGRSRSLNSMPSGLTAAVRSLDLSNNEITYIGNSDLRDCVNLKALRLESNGINT 91
Query: 242 YNLSQNIQEDDLQHLQLFTEYGRLA-LADTGTKPFQRLQFL 281
+ L+HL L Y L+ L+ + +P L+FL
Sbjct: 92 IEEESFLSLWSLEHLDL--SYNLLSNLSSSWFRPLSSLKFL 130
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.138 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 112,198,653
Number of Sequences: 539616
Number of extensions: 5046498
Number of successful extensions: 10236
Number of sequences better than 100.0: 44
Number of HSP's better than 100.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 10157
Number of HSP's gapped (non-prelim): 81
length of query: 281
length of database: 191,569,459
effective HSP length: 116
effective length of query: 165
effective length of database: 128,974,003
effective search space: 21280710495
effective search space used: 21280710495
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)