BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5036
(176 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P36402|TCF7_HUMAN Transcription factor 7 OS=Homo sapiens GN=TCF7 PE=1 SV=3
Length = 384
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/139 (44%), Positives = 80/139 (57%), Gaps = 12/139 (8%)
Query: 13 SLMAAHPGLSPHSHPAIVTPGPKQELLS-DHNHSGMRWGGMSKPSIMSWHVGSVNFICNF 71
S + HP PH PAIV P KQEL D N ++ SK + + F
Sbjct: 222 SGVPGHPAAIPH--PAIVPPSGKQELQPFDRN---LKTQAESKAEKEAKKPTIKKPLNAF 276
Query: 72 ILIGPQGQTKPEARSG-NEITNKNQMI--QWHSLTREEQAKYYEKARQERQLHMELYPGW 128
+L + + K A E NQ++ +WH+L+REEQAKYYE AR+ERQLHM+LYPGW
Sbjct: 277 MLYMKEMRAKVIAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGW 336
Query: 129 SARDNYGYGAKKKKRKKER 147
SARDNYG KKK+R +E+
Sbjct: 337 SARDNYG---KKKRRSREK 352
>sp|Q8IMA8|PANG2_DROME Protein pangolin, isoform J OS=Drosophila melanogaster GN=pan PE=1
SV=2
Length = 1192
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/57 (78%), Positives = 53/57 (92%), Gaps = 2/57 (3%)
Query: 94 NQMI--QWHSLTREEQAKYYEKARQERQLHMELYPGWSARDNYGYGAKKKKRKKERA 148
NQ++ +WH L+REEQ+KYYEKARQERQLHMELYPGWSARDNYGY +KKKKRKK+R+
Sbjct: 745 NQILGRRWHELSREEQSKYYEKARQERQLHMELYPGWSARDNYGYVSKKKKRKKDRS 801
>sp|P91943|PANG1_DROME Protein pangolin, isoforms A/H/I OS=Drosophila melanogaster GN=pan
PE=1 SV=1
Length = 751
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/64 (73%), Positives = 56/64 (87%), Gaps = 3/64 (4%)
Query: 94 NQMI--QWHSLTREEQAKYYEKARQERQLHMELYPGWSARDNYGYGAKKKKRKKERAPII 151
NQ++ +WH L+REEQ+KYYEKARQERQLHMELYPGWSARDNYGY +KKKKRKK+R+
Sbjct: 304 NQILGRRWHELSREEQSKYYEKARQERQLHMELYPGWSARDNYGYVSKKKKRKKDRS-TT 362
Query: 152 DTNG 155
D+ G
Sbjct: 363 DSGG 366
>sp|Q00417|TCF7_MOUSE Transcription factor 7 OS=Mus musculus GN=Tcf7 PE=2 SV=2
Length = 419
Score = 84.7 bits (208), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/149 (43%), Positives = 81/149 (54%), Gaps = 17/149 (11%)
Query: 8 RFSPTSLM-----AAHPGLSPHSHPAIVTPGPKQELLS-DHNHSGMRWGGMSKPSIMSWH 61
RF+ SLM HP PH PAIV KQEL D N K +
Sbjct: 247 RFTHPSLMLGSGVPGHPAAIPH--PAIVPSSGKQELQPYDRNLKTQAEPKAEKEAKKPVI 304
Query: 62 VGSVNFICNFILIGPQGQTKPEARSG-NEITNKNQMI--QWHSLTREEQAKYYEKARQER 118
+N F+L + + K A E NQ++ +WH+L+REEQAKYYE AR+ER
Sbjct: 305 KKPLN---AFMLYMKEMRAKVIAECTLKESAAINQILGRRWHALSREEQAKYYELARKER 361
Query: 119 QLHMELYPGWSARDNYGYGAKKKKRKKER 147
QLHM+LYPGWSARDNYG KKK+R +E+
Sbjct: 362 QLHMQLYPGWSARDNYG---KKKRRSREK 387
>sp|Q9HCS4|TF7L1_HUMAN Transcription factor 7-like 1 OS=Homo sapiens GN=TCF7L1 PE=2 SV=1
Length = 588
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 81/149 (54%), Gaps = 22/149 (14%)
Query: 1 MKTSLDYRFSPTSLMAAHPGLSPHS---HPAIVTPGPKQE--------LLSDHNHSGMRW 49
M + + RFSP + AHPGL P S HPAIV+P KQE +S + ++
Sbjct: 280 MSSLVSSRFSPHMVAPAHPGL-PTSGIPHPAIVSPIVKQEPAPPSLSPAVSVKSPVTVKK 338
Query: 50 GGMSKPSIMSWHVGSVNFICNFILIGPQGQTKPEARSG-NEITNKNQMI--QWHSLTREE 106
KP + + F+L + + K A E NQ++ +WH+L+REE
Sbjct: 339 EEEKKPHVK-------KPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRKWHNLSREE 391
Query: 107 QAKYYEKARQERQLHMELYPGWSARDNYG 135
QAKYYE AR+ERQLH +LYP WSARDNYG
Sbjct: 392 QAKYYELARKERQLHSQLYPTWSARDNYG 420
>sp|Q9YHE8|T7L1A_DANRE Transcription factor 7-like 1-A OS=Danio rerio GN=tcf7l1a PE=2 SV=1
Length = 560
Score = 80.9 bits (198), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/163 (40%), Positives = 84/163 (51%), Gaps = 22/163 (13%)
Query: 1 MKTSLDYRFSPTSLMAAHPGLSPH----SHPAIVTPGPKQELLSDHNHSGMRWGGMSKPS 56
M + + RFSP M HP H HPAIV+P KQE N KPS
Sbjct: 263 MSSLVSSRFSPH--MVPHPPHGLHQTGIPHPAIVSPAIKQEP----NGESPSNSTHGKPS 316
Query: 57 I-------MSWHVGSVNFICNFILIGPQGQTKPEARSG-NEITNKNQMI--QWHSLTREE 106
+ H+ + F+L + + K A E NQ++ +WHSL+REE
Sbjct: 317 VPVKKEEEKKPHIKKP--LNAFMLYMKEMRAKVVAECTLKESAAINQILGRRWHSLSREE 374
Query: 107 QAKYYEKARQERQLHMELYPGWSARDNYGYGAKKKKRKKERAP 149
QAKYYE AR+ERQLH +LYPGWSARDNYG K+K+ K +P
Sbjct: 375 QAKYYELARKERQLHSQLYPGWSARDNYGKRKKRKRDCKSDSP 417
>sp|Q9NQB0|TF7L2_HUMAN Transcription factor 7-like 2 OS=Homo sapiens GN=TCF7L2 PE=1 SV=2
Length = 619
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 41/44 (93%), Gaps = 2/44 (4%)
Query: 94 NQMI--QWHSLTREEQAKYYEKARQERQLHMELYPGWSARDNYG 135
NQ++ +WH+L+REEQAKYYE AR+ERQLHM+LYPGWSARDNYG
Sbjct: 381 NQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYG 424
>sp|Q6GL68|TF7L1_XENTR Transcription factor 7-like 1 OS=Xenopus tropicalis GN=tcf7l1 PE=2
SV=1
Length = 553
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/145 (41%), Positives = 80/145 (55%), Gaps = 14/145 (9%)
Query: 1 MKTSLDYRFSPTSLMAAHPGL--SPHSHPAIVTPGPKQELLSDHNHSGMRWGGMSKPSIM 58
M + + RFSP + H GL S HPAIV+P KQE S + + ++KPS++
Sbjct: 258 MSSLVSSRFSPHMVPPPHHGLHTSGIPHPAIVSPIVKQEPSSGNISPNL----ITKPSVV 313
Query: 59 SWHVGSV-----NFICNFILIGPQGQTKPEARSG-NEITNKNQMI--QWHSLTREEQAKY 110
+ F+L + + K A E NQ++ +WHSL+REEQAKY
Sbjct: 314 VKKEEEKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRRWHSLSREEQAKY 373
Query: 111 YEKARQERQLHMELYPGWSARDNYG 135
YE AR+ERQLH +LYP WSARDNYG
Sbjct: 374 YELARKERQLHSQLYPTWSARDNYG 398
>sp|Q924A0|TF7L2_MOUSE Transcription factor 7-like 2 OS=Mus musculus GN=Tcf7l2 PE=1 SV=2
Length = 459
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 41/44 (93%), Gaps = 2/44 (4%)
Query: 94 NQMI--QWHSLTREEQAKYYEKARQERQLHMELYPGWSARDNYG 135
NQ++ +WH+L+REEQAKYYE AR+ERQLHM+LYPGWSARDNYG
Sbjct: 358 NQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYG 401
>sp|Q9QXN1|LEF1_RAT Lymphoid enhancer-binding factor 1 OS=Rattus norvegicus GN=Lef1
PE=2 SV=1
Length = 397
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 41/44 (93%), Gaps = 2/44 (4%)
Query: 94 NQMI--QWHSLTREEQAKYYEKARQERQLHMELYPGWSARDNYG 135
NQ++ +WH+L+REEQAKYYE AR+ERQLHM+LYPGWSARDNYG
Sbjct: 328 NQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYG 371
>sp|P27782|LEF1_MOUSE Lymphoid enhancer-binding factor 1 OS=Mus musculus GN=Lef1 PE=1
SV=1
Length = 397
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 41/44 (93%), Gaps = 2/44 (4%)
Query: 94 NQMI--QWHSLTREEQAKYYEKARQERQLHMELYPGWSARDNYG 135
NQ++ +WH+L+REEQAKYYE AR+ERQLHM+LYPGWSARDNYG
Sbjct: 328 NQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYG 371
>sp|Q9UJU2|LEF1_HUMAN Lymphoid enhancer-binding factor 1 OS=Homo sapiens GN=LEF1 PE=1
SV=1
Length = 399
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 41/44 (93%), Gaps = 2/44 (4%)
Query: 94 NQMI--QWHSLTREEQAKYYEKARQERQLHMELYPGWSARDNYG 135
NQ++ +WH+L+REEQAKYYE AR+ERQLHM+LYPGWSARDNYG
Sbjct: 330 NQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYG 373
>sp|Q9Z1J1|TF7L1_MOUSE Transcription factor 7-like 1 OS=Mus musculus GN=Tcf7l1 PE=1 SV=2
Length = 584
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/144 (41%), Positives = 78/144 (54%), Gaps = 13/144 (9%)
Query: 1 MKTSLDYRFSPTSLMAAHPGLSPHS---HPAIVTPGPKQELLSDHNHSGMRWGG---MSK 54
M + + RF P + AHPGL P S HPAIV+P KQE + + + K
Sbjct: 277 MSSLVSSRF-PHMVAPAHPGL-PTSGIPHPAIVSPIVKQEPAAPSLSPAVSAKSPVTVKK 334
Query: 55 PSIMSWHVGSVNFICNFILIGPQGQTKPEARSG-NEITNKNQMI--QWHSLTREEQAKYY 111
HV + F+L + + K A E NQ++ +WH+L+REEQAKYY
Sbjct: 335 EEEKKPHVKKP--LNAFMLYMKEMRAKVVAECTLKESAAINQILGRKWHNLSREEQAKYY 392
Query: 112 EKARQERQLHMELYPGWSARDNYG 135
E AR+ERQLH +LYP WSARDNYG
Sbjct: 393 ELARKERQLHAQLYPTWSARDNYG 416
>sp|Q800Q5|T7L1B_DANRE Transcription factor 7-like 1-B OS=Danio rerio GN=tcf7l1b PE=2 SV=1
Length = 551
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 40/44 (90%), Gaps = 2/44 (4%)
Query: 94 NQMI--QWHSLTREEQAKYYEKARQERQLHMELYPGWSARDNYG 135
NQ++ +WHSL+REEQAKYYE AR+ERQLH +LYPGWSARDNYG
Sbjct: 357 NQILGRRWHSLSREEQAKYYELARKERQLHSQLYPGWSARDNYG 400
>sp|P70064|T7L1D_XENLA Transcription factor 7-like 1-D OS=Xenopus laevis GN=tcf7l1-d PE=2
SV=1
Length = 550
Score = 77.0 bits (188), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/141 (40%), Positives = 73/141 (51%), Gaps = 6/141 (4%)
Query: 1 MKTSLDYRFSPTSLMAAHPGL--SPHSHPAIVTPGPKQELLSDHNHSGMRWGGMSKPSIM 58
M + + RFSP + H L S HPAIV+P KQE S + +
Sbjct: 257 MSSLVSSRFSPHMVPPPHHSLHTSGIPHPAIVSPIVKQEPSSGNISPNLSMKSNVVVKKE 316
Query: 59 SWHVGSVNFICN-FILIGPQGQTKPEARSG-NEITNKNQMI--QWHSLTREEQAKYYEKA 114
+ N F+L + + K A E NQ++ +WHSL+REEQAKYYE A
Sbjct: 317 EEKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRRWHSLSREEQAKYYELA 376
Query: 115 RQERQLHMELYPGWSARDNYG 135
R+ERQLH +LYP WSARDNYG
Sbjct: 377 RKERQLHSQLYPSWSARDNYG 397
>sp|P70062|T7L1A_XENLA Transcription factor 7-like 1-A OS=Xenopus laevis GN=tcf7l1-a PE=1
SV=1
Length = 554
Score = 77.0 bits (188), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/148 (41%), Positives = 77/148 (52%), Gaps = 20/148 (13%)
Query: 1 MKTSLDYRFSPTSLMAAHPGL--SPHSHPAIVTPGPKQELLSD------HNHSGM--RWG 50
M + + RFSP + H L S HPAIV+P KQE S H S M +
Sbjct: 258 MSSLVSSRFSPHMVPPPHHSLHTSGIPHPAIVSPIVKQEPSSGNISPNLHTKSNMIVKKE 317
Query: 51 GMSKPSIMSWHVGSVNFICNFILIGPQGQTKPEARSG-NEITNKNQMI--QWHSLTREEQ 107
KP I + F+L + + K A E NQ++ +WHSL+REEQ
Sbjct: 318 EEKKPHIK-------KPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRRWHSLSREEQ 370
Query: 108 AKYYEKARQERQLHMELYPGWSARDNYG 135
AKYYE AR+ERQLH +LYP WSARDNYG
Sbjct: 371 AKYYELARKERQLHSQLYPSWSARDNYG 398
>sp|P70063|T7L1C_XENLA Transcription factor 7-like 1-C OS=Xenopus laevis GN=tcf7l1-c PE=2
SV=1
Length = 550
Score = 76.6 bits (187), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/141 (40%), Positives = 73/141 (51%), Gaps = 6/141 (4%)
Query: 1 MKTSLDYRFSPTSLMAAHPGL--SPHSHPAIVTPGPKQELLSDHNHSGMRWGGMSKPSIM 58
M + + RFSP + H L S HPAIV+P KQE S + +
Sbjct: 257 MSSLVSSRFSPHMVPPPHHSLHTSGIPHPAIVSPIVKQEPSSGNISPNLSRKSNVVVKKE 316
Query: 59 SWHVGSVNFICN-FILIGPQGQTKPEARSG-NEITNKNQMI--QWHSLTREEQAKYYEKA 114
+ N F+L + + K A E NQ++ +WHSL+REEQAKYYE A
Sbjct: 317 EEKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRRWHSLSREEQAKYYELA 376
Query: 115 RQERQLHMELYPGWSARDNYG 135
R+ERQLH +LYP WSARDNYG
Sbjct: 377 RKERQLHSQLYPSWSARDNYG 397
>sp|Q90ZB6|T7L1B_XENLA Transcription factor 7-like 1-B OS=Xenopus laevis GN=tcf7l1-b PE=1
SV=1
Length = 551
Score = 76.6 bits (187), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/141 (40%), Positives = 73/141 (51%), Gaps = 6/141 (4%)
Query: 1 MKTSLDYRFSPTSLMAAHPGL--SPHSHPAIVTPGPKQELLSDHNHSGMRWGGMSKPSIM 58
M + + RFSP + H L S HPAIV+P KQE S + +
Sbjct: 258 MSSLVSSRFSPHMVPPPHHSLHTSGIPHPAIVSPIVKQEPSSGNISPNLSTKSNVVVKKE 317
Query: 59 SWHVGSVNFICN-FILIGPQGQTKPEARSG-NEITNKNQMI--QWHSLTREEQAKYYEKA 114
+ N F+L + + K A E NQ++ +WHSL+REEQAKYYE A
Sbjct: 318 EEKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRRWHSLSREEQAKYYELA 377
Query: 115 RQERQLHMELYPGWSARDNYG 135
R+ERQLH +LYP WSARDNYG
Sbjct: 378 RKERQLHSQLYPSWSARDNYG 398
>sp|Q10666|POP1_CAEEL Protein pop-1 OS=Caenorhabditis elegans GN=pop-1 PE=1 SV=3
Length = 438
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 33/44 (75%)
Query: 92 NKNQMIQWHSLTREEQAKYYEKARQERQLHMELYPGWSARDNYG 135
NK +WH L++EEQAKY+E A+++++ H E YP WSAR+NY
Sbjct: 225 NKELGKRWHDLSKEEQAKYFEMAKKDKETHKERYPEWSARENYA 268
>sp|A8WWH5|POP1_CAEBR Protein pop-1 OS=Caenorhabditis briggsae GN=pop-1 PE=3 SV=2
Length = 439
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 31/44 (70%)
Query: 92 NKNQMIQWHSLTREEQAKYYEKARQERQLHMELYPGWSARDNYG 135
NK +WH L +EEQ KY+E A+++R+ H E YP WSAR+NY
Sbjct: 232 NKELGKRWHDLPKEEQQKYFEMAKKDRESHKEKYPQWSARENYA 275
>sp|Q8CGW4|SOX30_MOUSE Transcription factor SOX-30 OS=Mus musculus GN=Sox30 PE=2 SV=1
Length = 782
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 9/75 (12%)
Query: 97 IQWHSLTREEQAKYYEKARQERQLHMELYPGWSARDNYGYGAKKKKRKKERAPIIDTNGG 156
++W+ L+ E++ YY++A++ ++ H E +PGW Y + KRK+ + + G
Sbjct: 402 LEWNKLSEEQKKPYYDEAQKIKEKHREEFPGWV------YQPRPGKRKRFPLSVSNVFSG 455
Query: 157 TTHQI---NINLIYP 168
TT I N IYP
Sbjct: 456 TTQNIISTNPTTIYP 470
>sp|O94993|SOX30_HUMAN Transcription factor SOX-30 OS=Homo sapiens GN=SOX30 PE=1 SV=1
Length = 753
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 9/75 (12%)
Query: 97 IQWHSLTREEQAKYYEKARQERQLHMELYPGWSARDNYGYGAKKKKRKKERAPIIDTNGG 156
++W+ L+ E++ YY++A++ ++ H E +PGW Y + KRK+ + + G
Sbjct: 373 LEWNKLSEEQKKPYYDEAQKIKEKHREEFPGWV------YQPRPGKRKRFPLSVSNVFSG 426
Query: 157 TTHQI---NINLIYP 168
TT I N +YP
Sbjct: 427 TTQNIISTNPTTVYP 441
>sp|Q8WNV5|SOX30_MACFA Transcription factor SOX-30 OS=Macaca fascicularis GN=SOX30 PE=2
SV=1
Length = 753
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 9/75 (12%)
Query: 97 IQWHSLTREEQAKYYEKARQERQLHMELYPGWSARDNYGYGAKKKKRKKERAPIIDTNGG 156
++W+ L+ E++ YY++A++ ++ H E +PGW Y + KRK+ + + G
Sbjct: 373 LEWNKLSEEQKKPYYDEAQKIKEKHREEFPGWV------YQPRPGKRKRFPLSVSNVFSG 426
Query: 157 TTHQI---NINLIYP 168
TT I N +YP
Sbjct: 427 TTQNIISTNPTTVYP 441
>sp|Q90ZH8|SX18A_XENLA Transcription factor Sox-18A OS=Xenopus laevis GN=sox18-a PE=1 SV=1
Length = 363
Score = 35.8 bits (81), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query: 88 NEITNKNQMIQWHSLTREEQAKYYEKARQERQLHMELYPGWSARDNYGYGAKKKKRKKER 147
N + +K W +LT E+ + E+A + R H++ +P + R AKK KR +
Sbjct: 95 NAVLSKMLGQSWKNLTSVEKRPFVEEAERLRVQHLQDHPNYKYRPRRKKQAKKLKR-MDP 153
Query: 148 APIIDTNGGTTHQININL 165
+P++ G T Q +NL
Sbjct: 154 SPLLRNEGFTRGQPMVNL 171
>sp|Q6TC50|SRY_FELCA Sex-determining region Y protein OS=Felis catus GN=SRY PE=3 SV=1
Length = 234
Score = 35.4 bits (80), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 8/76 (10%)
Query: 88 NEITNKNQMIQWHSLTREEQAKYYEKARQERQLHMELYPGWSARDNYGYGAKKKKR--KK 145
N +K QW LT+ E+ ++E+A++ + LH E YPG Y Y ++K R K
Sbjct: 81 NSEISKQLGYQWKMLTQAEKWPFFEEAQRLQALHREKYPG------YRYRPRRKARPEKS 134
Query: 146 ERAPIIDTNGGTTHQI 161
++ P D + Q+
Sbjct: 135 DKLPPADASSTLCSQL 150
>sp|Q62563|SRY_MUSSP Sex-determining region Y protein OS=Mus spretus GN=Sry PE=3 SV=2
Length = 355
Score = 35.4 bits (80), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 48/105 (45%), Gaps = 10/105 (9%)
Query: 63 GSVNFICNFILIGPQGQTKPEARSGNEITN----KNQMIQWHSLTREEQAKYYEKARQER 118
G V N ++ +G+ A+ + N K +W SLT E+ ++++A++ +
Sbjct: 3 GHVKRPMNAFMVWSRGERHKLAQQNPSMQNTEISKQLGCRWKSLTEAEKRPFFQEAQRLK 62
Query: 119 QLHMELYPGWSARDNYGYGAKKKKRKKERAPIIDTNGGTTHQINI 163
LH E YP NY Y ++ + +R+ I+ +T N+
Sbjct: 63 TLHREKYP------NYKYQPHRRAKVSQRSGILQPRVASTKLYNL 101
>sp|Q62565|SRY_MUSSI Sex-determining region Y protein OS=Mus spicilegus GN=Sry PE=3 SV=2
Length = 311
Score = 35.0 bits (79), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 48/105 (45%), Gaps = 10/105 (9%)
Query: 63 GSVNFICNFILIGPQGQTKPEARSGNEITN----KNQMIQWHSLTREEQAKYYEKARQER 118
G V N ++ +G+ A+ + N K +W SLT E+ ++++A++ +
Sbjct: 3 GHVKRPMNAFMVWSRGERHKLAQQNPSMQNTEISKQLGCRWKSLTEAEKRPFFQEAQRLK 62
Query: 119 QLHMELYPGWSARDNYGYGAKKKKRKKERAPIIDTNGGTTHQINI 163
LH E YP NY Y ++ + +R+ I+ +T N+
Sbjct: 63 TLHREKYP------NYKYQPHRRAKVSQRSGILQPRVASTKLYNL 101
>sp|Q05738|SRY_MOUSE Sex-determining region Y protein OS=Mus musculus GN=Sry PE=1 SV=2
Length = 395
Score = 34.3 bits (77), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 48/105 (45%), Gaps = 10/105 (9%)
Query: 63 GSVNFICNFILIGPQGQTKPEARSGNEITN----KNQMIQWHSLTREEQAKYYEKARQER 118
G V N ++ +G+ A+ + N K +W SLT E+ ++++A++ +
Sbjct: 3 GHVKRPMNAFMVWSRGERHKLAQQNPSMQNTEISKQLGCRWKSLTEAEKRPFFQEAQRLK 62
Query: 119 QLHMELYPGWSARDNYGYGAKKKKRKKERAPIIDTNGGTTHQINI 163
LH E YP NY Y ++ + +R+ I+ +T N+
Sbjct: 63 ILHREKYP------NYKYQPHRRAKVSQRSGILQPAVASTKLYNL 101
>sp|P40657|SOX15_DROME Putative transcription factor SOX-15 OS=Drosophila melanogaster
GN=Sox15 PE=2 SV=2
Length = 784
Score = 34.3 bits (77), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 98 QWHSLTREEQAKYYEKARQERQLHMELYPGWSARDNYGYGAKKKKRKKERA 148
+W SLT +++ Y E+A + R +HM +P NY Y +++K+ K RA
Sbjct: 252 KWRSLTPQDRRPYVEEAERLRVIHMTEHP------NYKYRPRRRKQSKLRA 296
>sp|Q864Q4|SRY_MESST Sex-determining region Y protein OS=Mesoplodon stejnegeri GN=SRY
PE=3 SV=1
Length = 216
Score = 33.9 bits (76), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 17/73 (23%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 99 WHSLTREEQAKYYEKARQERQLHMELYPGWSARDNYGYGAKKKKRKKERAPIIDTNGGTT 158
W LT E+ ++E+A++ R +H + YPG Y Y ++K ++ +++ D++ +
Sbjct: 92 WKMLTEAEKQPFFEEAQRLRAMHRDKYPG------YKYRPRRKAKRPQKSLPADSSVRCS 145
Query: 159 HQININLIYPVIF 171
+YP +
Sbjct: 146 RMHIEETLYPFTY 158
>sp|Q480B8|MNMA_COLP3 tRNA-specific 2-thiouridylase MnmA OS=Colwellia psychrerythraea
(strain 34H / ATCC BAA-681) GN=mnmA PE=3 SV=1
Length = 375
Score = 33.5 bits (75), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Query: 46 GMRWGGMSKPSIMSWHVGSVNFICNFILIGPQGQTKPEARSGNEITNKNQMIQWHSLTRE 105
G+R GG++ W+V + + N +++G QG P S I N+ + +LT
Sbjct: 252 GLRIGGLADAGEEPWYVVEKDLLRNVLIVG-QGHNHPRLFSKGLIANQLHWVDRKALTSS 310
Query: 106 EQAKYYEKARQE 117
Q + RQE
Sbjct: 311 IQCTVKTRYRQE 322
>sp|Q863C2|SRY_AXIPR Sex-determining region Y protein OS=Axis porcinus GN=SRY PE=3 SV=1
Length = 229
Score = 33.1 bits (74), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 39/74 (52%), Gaps = 7/74 (9%)
Query: 98 QWHSLTREEQAKYYEKARQERQLHMELYPGWSARDNYGYGAKKKKRKKERAPIIDTNGGT 157
+W LT E+ ++E+A++ +H + YPG Y Y ++K +++++ D+
Sbjct: 91 EWKRLTDAEKRPFFEEAQRLLAVHRDKYPG------YKYRPRRKTKRQQKLLPADS-SKL 143
Query: 158 THQININLIYPVIF 171
Q++I + P I+
Sbjct: 144 CKQMHIETLQPFIY 157
>sp|P36394|SRY_RAT Sex-determining region Y protein (Fragment) OS=Rattus norvegicus
GN=Sry PE=1 SV=2
Length = 121
Score = 33.1 bits (74), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 53/117 (45%), Gaps = 14/117 (11%)
Query: 63 GSVNFICNFILIGPQGQTKPEARSGNEITN----KNQMIQWHSLTREEQAKYYEKARQER 118
G V N ++ +G+ A+ + N K QW SLT E+ ++++A++ +
Sbjct: 3 GQVKRPMNAFMVWSRGERHKLAQQNPSMQNSEISKQLGYQWKSLTEAEKRPFFQEAQRLK 62
Query: 119 QLHMELYPGWSARDNYGYGAKKKKRKKERAPIIDTNGGTTHQINI----NLIYPVIF 171
LH E YP NY Y ++ + +R+ + +T N+ N ++ +I+
Sbjct: 63 TLHREKYP------NYKYQPHRRVKVPQRSYTLQREVASTKLYNLLQWDNNLHTIIY 113
>sp|P36389|SRY_HORSE Sex-determining region Y protein OS=Equus caballus GN=SRY PE=2 SV=2
Length = 223
Score = 32.7 bits (73), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 45/99 (45%), Gaps = 16/99 (16%)
Query: 88 NEITNKNQMIQWHSLTREEQAKYYEKARQERQLHMELYPGWSARDNYGYGAKKKKRKKER 147
N +K QW LT E+ ++E+A++ R +H E YP +Y Y ++K + ++
Sbjct: 81 NSEISKRLGCQWKMLTEAEKLPFFEEAQRLRAMHQEKYP------DYKYRPRRKAKMPQK 134
Query: 148 A-------PIIDTNGGTTHQININ---LIYPVIFITMQQ 176
+ P++ G T+ LI+ +F+ Q
Sbjct: 135 SDKPLPQTPLLHCAGRRTYTSTSGCPFLIHGRLFLRATQ 173
>sp|Q864Q8|SRY_MEGNO Sex-determining region Y protein OS=Megaptera novaeangliae GN=SRY
PE=3 SV=1
Length = 204
Score = 32.7 bits (73), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/73 (23%), Positives = 36/73 (49%), Gaps = 6/73 (8%)
Query: 99 WHSLTREEQAKYYEKARQERQLHMELYPGWSARDNYGYGAKKKKRKKERAPIIDTNGGTT 158
W LT E+ ++E+A++ R +H + YPG Y Y ++K ++ ++ D++ +
Sbjct: 92 WKMLTEAEKQPFFEEAQRLRAMHRDKYPG------YKYRPRRKAKRSQKLLPADSSVLCS 145
Query: 159 HQININLIYPVIF 171
+YP +
Sbjct: 146 RMHIEETLYPFTY 158
>sp|Q864Q9|SRY_BALPH Sex-determining region Y protein OS=Balaenoptera physalus GN=SRY
PE=3 SV=1
Length = 204
Score = 32.7 bits (73), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/73 (23%), Positives = 36/73 (49%), Gaps = 6/73 (8%)
Query: 99 WHSLTREEQAKYYEKARQERQLHMELYPGWSARDNYGYGAKKKKRKKERAPIIDTNGGTT 158
W LT E+ ++E+A++ R +H + YPG Y Y ++K ++ ++ D++ +
Sbjct: 92 WKMLTEAEKQPFFEEAQRLRAMHRDKYPG------YKYRPRRKAKRSQKLLPADSSVLCS 145
Query: 159 HQININLIYPVIF 171
+YP +
Sbjct: 146 RMHIEETLYPFTY 158
>sp|Q864Q5|SRY_KOGSI Sex-determining region Y protein OS=Kogia sima GN=SRY PE=3 SV=1
Length = 216
Score = 32.7 bits (73), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/73 (23%), Positives = 36/73 (49%), Gaps = 6/73 (8%)
Query: 99 WHSLTREEQAKYYEKARQERQLHMELYPGWSARDNYGYGAKKKKRKKERAPIIDTNGGTT 158
W LT E+ ++E+A++ R +H + YPG Y Y ++K ++ ++ D++ +
Sbjct: 92 WKMLTEAEKQPFFEEAQRLRAMHRDKYPG------YKYRPRRKPKRPQKLLPADSSVLCS 145
Query: 159 HQININLIYPVIF 171
+YP +
Sbjct: 146 RMHIEETLYPFTY 158
>sp|Q870J1|STE11_PNECA HMG-box protein STE11 OS=Pneumocystis carinii PE=1 SV=1
Length = 501
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 10/86 (11%)
Query: 91 TNKNQMIQ------WHSLTREEQAKYYEKARQERQLHMELYPGWS----ARDNYGYGAKK 140
TN +Q I W T EE+ +Y E A++ER+ H + YP + + + K
Sbjct: 221 TNNHQSISRIIGEMWKRETIEEKERYAEMAQRERERHAKEYPDYKFLPRKKKDRSTSGKS 280
Query: 141 KKRKKERAPIIDTNGGTTHQININLI 166
+R+K P ++ + ++ +N I
Sbjct: 281 PRRRKTFDPSLEQDESKVLRMMLNQI 306
>sp|Q864R0|SRY_BALMU Sex-determining region Y protein OS=Balaenoptera musculus GN=SRY
PE=3 SV=1
Length = 204
Score = 32.3 bits (72), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/73 (23%), Positives = 36/73 (49%), Gaps = 6/73 (8%)
Query: 99 WHSLTREEQAKYYEKARQERQLHMELYPGWSARDNYGYGAKKKKRKKERAPIIDTNGGTT 158
W LT E+ ++E+A++ R +H + YPG Y Y ++K ++ ++ D++ +
Sbjct: 92 WKMLTEAEKQPFFEEAQRLRAMHRDKYPG------YKYRPRRKAKRPQKLLPADSSVLCS 145
Query: 159 HQININLIYPVIF 171
+YP +
Sbjct: 146 RMHIEETLYPFTY 158
>sp|Q864R1|SRY_BALBN Sex-determining region Y protein OS=Balaenoptera bonaerensis GN=SRY
PE=3 SV=1
Length = 204
Score = 32.3 bits (72), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/73 (23%), Positives = 36/73 (49%), Gaps = 6/73 (8%)
Query: 99 WHSLTREEQAKYYEKARQERQLHMELYPGWSARDNYGYGAKKKKRKKERAPIIDTNGGTT 158
W LT E+ ++E+A++ R +H + YPG Y Y ++K ++ ++ D++ +
Sbjct: 92 WKMLTEAEKQPFFEEAQRLRAMHRDKYPG------YKYRPRRKAKRPQKLLPADSSVLCS 145
Query: 159 HQININLIYPVIF 171
+YP +
Sbjct: 146 RMHIEETLYPFTY 158
>sp|Q864R2|SRY_BALAC Sex-determining region Y protein OS=Balaenoptera acutorostrata
GN=SRY PE=3 SV=1
Length = 204
Score = 32.3 bits (72), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/73 (23%), Positives = 36/73 (49%), Gaps = 6/73 (8%)
Query: 99 WHSLTREEQAKYYEKARQERQLHMELYPGWSARDNYGYGAKKKKRKKERAPIIDTNGGTT 158
W LT E+ ++E+A++ R +H + YPG Y Y ++K ++ ++ D++ +
Sbjct: 92 WKMLTEAEKQPFFEEAQRLRAMHRDKYPG------YKYRPRRKAKRPQKLLPADSSVLCS 145
Query: 159 HQININLIYPVIF 171
+YP +
Sbjct: 146 RMHIEETLYPFTY 158
>sp|Q9U1H0|CIC_DROME Putative transcription factor capicua OS=Drosophila melanogaster
GN=cic PE=1 SV=2
Length = 1832
Score = 32.3 bits (72), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 20/30 (66%)
Query: 99 WHSLTREEQAKYYEKARQERQLHMELYPGW 128
W++L E++A+Y+E A + H +L+P W
Sbjct: 528 WYALKPEQKAQYHELASSVKDAHFKLHPEW 557
>sp|Q864Q6|SRY_PHYMC Sex-determining region Y protein OS=Physeter macrocephalus GN=SRY
PE=3 SV=1
Length = 216
Score = 32.0 bits (71), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/73 (23%), Positives = 36/73 (49%), Gaps = 6/73 (8%)
Query: 99 WHSLTREEQAKYYEKARQERQLHMELYPGWSARDNYGYGAKKKKRKKERAPIIDTNGGTT 158
W LT E+ ++E+A++ R +H + YPG Y Y ++K ++ + + D++ +
Sbjct: 92 WKMLTEAEKQPFFEEAQRLRAMHRDKYPG------YKYHPRRKPKRPQESLPADSSVLCS 145
Query: 159 HQININLIYPVIF 171
+YP +
Sbjct: 146 RTHIEETLYPFTY 158
>sp|O42342|SOX7_XENLA Transcription factor Sox-7 OS=Xenopus laevis GN=sox7 PE=2 SV=1
Length = 362
Score = 32.0 bits (71), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 6/55 (10%)
Query: 99 WHSLTREEQAKYYEKARQERQLHMELYPGWSARDNYGYGAKKKKRKKERAPIIDT 153
W +L+ ++ Y E+A + R HM+ YP NY Y ++KK+ K +DT
Sbjct: 80 WKALSPAQKRPYVEEAERLRVQHMQDYP------NYKYRPRRKKQIKRICKRVDT 128
>sp|Q28GD5|SOX7_XENTR Transcription factor Sox-7 OS=Xenopus tropicalis GN=sox7 PE=2 SV=1
Length = 362
Score = 32.0 bits (71), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 6/55 (10%)
Query: 99 WHSLTREEQAKYYEKARQERQLHMELYPGWSARDNYGYGAKKKKRKKERAPIIDT 153
W +L+ ++ Y E+A + R HM+ YP NY Y ++KK+ K +DT
Sbjct: 80 WKALSPAQKRPYVEEAERLRVQHMQDYP------NYKYRPRRKKQIKRICKRVDT 128
>sp|Q67EX7|SRY_MOSBE Sex-determining region Y protein OS=Moschus berezovskii GN=SRY PE=3
SV=1
Length = 227
Score = 32.0 bits (71), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/74 (22%), Positives = 38/74 (51%), Gaps = 7/74 (9%)
Query: 98 QWHSLTREEQAKYYEKARQERQLHMELYPGWSARDNYGYGAKKKKRKKERAPIIDTNGGT 157
+W LT E+ ++E+A++ +H + YPG+ R +K KR + P + +
Sbjct: 91 EWKRLTDAEKRPFFEEAQRLLAIHQDKYPGYKYRPR-----RKAKRPQNSLPSV--SSIL 143
Query: 158 THQININLIYPVIF 171
+Q+++ ++P +
Sbjct: 144 CNQMSVETLHPFTY 157
>sp|Q03256|SRY_CAPHI Sex-determining region Y protein OS=Capra hircus GN=SRY PE=3 SV=2
Length = 240
Score = 32.0 bits (71), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/74 (21%), Positives = 40/74 (54%), Gaps = 7/74 (9%)
Query: 98 QWHSLTREEQAKYYEKARQERQLHMELYPGWSARDNYGYGAKKKKRKKERAPIIDTNGGT 157
+W LT E+ ++E+A++ +H + YPG Y Y ++K ++ +++ D+
Sbjct: 102 EWKRLTDAEKRPFFEEAQRLLAIHRDKYPG------YKYRPRRKAKRPQKSLDADS-PIL 154
Query: 158 THQININLIYPVIF 171
+Q+++ ++P +
Sbjct: 155 CNQMDVETLHPFTY 168
>sp|Q9BT81|SOX7_HUMAN Transcription factor SOX-7 OS=Homo sapiens GN=SOX7 PE=1 SV=1
Length = 388
Score = 32.0 bits (71), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 6/54 (11%)
Query: 99 WHSLTREEQAKYYEKARQERQLHMELYPGWSARDNYGYGAKKKKRKKERAPIID 152
W +LT ++ Y ++A + R HM+ YP NY Y ++KK+ K +D
Sbjct: 83 WKALTLSQKRPYVDEAERLRLQHMQDYP------NYKYRPRRKKQAKRLCKRVD 130
>sp|P40646|SOX7_MOUSE Transcription factor SOX-7 OS=Mus musculus GN=Sox7 PE=1 SV=2
Length = 380
Score = 31.6 bits (70), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 6/54 (11%)
Query: 99 WHSLTREEQAKYYEKARQERQLHMELYPGWSARDNYGYGAKKKKRKKERAPIID 152
W +LT ++ Y ++A + R HM+ YP NY Y ++KK+ K +D
Sbjct: 83 WKALTLSQKRPYVDEAERLRLQHMQDYP------NYKYRPRRKKQGKRLCKRVD 130
>sp|Q864Q2|SRY_PHOPH Sex-determining region Y protein OS=Phocoenoides phocoena GN=SRY
PE=3 SV=1
Length = 196
Score = 31.6 bits (70), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 21/33 (63%)
Query: 99 WHSLTREEQAKYYEKARQERQLHMELYPGWSAR 131
W LT E+ ++E+A++ R +H + YPG+ R
Sbjct: 92 WKMLTEAEKQPFFEEAQRLRAMHRDKYPGYKYR 124
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.132 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72,833,279
Number of Sequences: 539616
Number of extensions: 3109147
Number of successful extensions: 7582
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 111
Number of HSP's successfully gapped in prelim test: 52
Number of HSP's that attempted gapping in prelim test: 7438
Number of HSP's gapped (non-prelim): 186
length of query: 176
length of database: 191,569,459
effective HSP length: 110
effective length of query: 66
effective length of database: 132,211,699
effective search space: 8725972134
effective search space used: 8725972134
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 57 (26.6 bits)