BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy504
(358 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q3TLP5|ECHD2_MOUSE Enoyl-CoA hydratase domain-containing protein 2, mitochondrial
OS=Mus musculus GN=Echdc2 PE=2 SV=2
Length = 296
Score = 167 bits (422), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 79/146 (54%), Positives = 107/146 (73%)
Query: 47 GIVELCMNRPQARNALNATLVEEILTAVEAIRGDEEVRCVLLRSLVKDVFCAGADLKHRL 106
GI E+ MNRP ARNAL V E+L A+ +R D++VR +L RS VK VFCAGADLK R
Sbjct: 45 GITEILMNRPNARNALGNVFVSELLEALAQLREDQQVRVLLFRSAVKGVFCAGADLKERE 104
Query: 107 TLNEDQIRSFVSTLRYMTCQLESIPVPVLAVLDGSAYGGGLEMALACDIRVAASNVRMGL 166
+++ ++ +FV LR + ++ + PVP +A +DG A GGGLE+ALACD+R+AAS+ MGL
Sbjct: 105 QMSDVEVGTFVQRLRGLMSEIAAFPVPTIAAMDGFALGGGLELALACDLRIAASSAVMGL 164
Query: 167 VETKLAIIPGAGGTQRLPRIVGIPLA 192
+ET ++PGAGGTQRLPR +G+ LA
Sbjct: 165 IETTRGLLPGAGGTQRLPRCLGVALA 190
>sp|Q2TBT3|ECHD2_BOVIN Enoyl-CoA hydratase domain-containing protein 2, mitochondrial
OS=Bos taurus GN=ECHDC2 PE=2 SV=1
Length = 296
Score = 163 bits (413), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 83/169 (49%), Positives = 115/169 (68%), Gaps = 2/169 (1%)
Query: 24 STSVSKEGRKLTQIIYHNSPERPGIVELCMNRPQARNALNATLVEEILTAVEAIRGDEEV 83
S++ GR++ Q+ P + GI E+ MNRP ARNAL V ++L A+ +R D +V
Sbjct: 24 SSNPGAAGREI-QVCALAGPNQ-GIAEILMNRPSARNALGNVFVSQLLEALAQLREDRQV 81
Query: 84 RCVLLRSLVKDVFCAGADLKHRLTLNEDQIRSFVSTLRYMTCQLESIPVPVLAVLDGSAY 143
R ++ RS VK VFCAGADLK R ++E ++ FV LR + ++ + P P +A +DG A
Sbjct: 82 RVLIFRSGVKGVFCAGADLKEREQMSEAEVGLFVQRLRGLMTEIAAFPAPTIAAMDGFAL 141
Query: 144 GGGLEMALACDIRVAASNVRMGLVETKLAIIPGAGGTQRLPRIVGIPLA 192
GGGLE+ALACD+RVAAS+ MGL+ET ++PGAGGTQRLPR +G+ LA
Sbjct: 142 GGGLELALACDLRVAASSAVMGLIETTRGLLPGAGGTQRLPRCLGVALA 190
>sp|Q86YB7|ECHD2_HUMAN Enoyl-CoA hydratase domain-containing protein 2, mitochondrial
OS=Homo sapiens GN=ECHDC2 PE=2 SV=2
Length = 292
Score = 161 bits (408), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 79/146 (54%), Positives = 102/146 (69%)
Query: 47 GIVELCMNRPQARNALNATLVEEILTAVEAIRGDEEVRCVLLRSLVKDVFCAGADLKHRL 106
GI E+ MNRP ARNAL V E+L + +R D +VR +L RS VK VFCAGADLK R
Sbjct: 41 GITEILMNRPSARNALGNVFVSELLETLAQLREDRQVRVLLFRSGVKGVFCAGADLKERE 100
Query: 107 TLNEDQIRSFVSTLRYMTCQLESIPVPVLAVLDGSAYGGGLEMALACDIRVAASNVRMGL 166
++E ++ FV LR + + + P P +A +DG A GGGLE+ALACD+RVAAS+ MGL
Sbjct: 101 QMSEAEVGVFVQRLRGLMNDIAAFPAPTIAAMDGFALGGGLELALACDLRVAASSAVMGL 160
Query: 167 VETKLAIIPGAGGTQRLPRIVGIPLA 192
+ET ++PGAGGTQRLPR +G+ LA
Sbjct: 161 IETTRGLLPGAGGTQRLPRCLGVALA 186
>sp|Q54HG7|AUHM_DICDI Methylglutaconyl-CoA hydratase, mitochondrial OS=Dictyostelium
discoideum GN=auh PE=3 SV=1
Length = 303
Score = 149 bits (377), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 81/177 (45%), Positives = 111/177 (62%), Gaps = 7/177 (3%)
Query: 23 YSTSVS-KEGRKLTQ------IIYHNSPERPGIVELCMNRPQARNALNATLVEEILTAVE 75
+STS S K GRK T I+ E GI + NR +NAL L+ + + +
Sbjct: 25 FSTSSSLKFGRKFTTETQQECILERLEGENKGISVISFNRGHVKNALGKNLMNQFRSHLN 84
Query: 76 AIRGDEEVRCVLLRSLVKDVFCAGADLKHRLTLNEDQIRSFVSTLRYMTCQLESIPVPVL 135
+R + R V++RSLV VFC+GADLK R +++ + FV +LR +LE++ +P +
Sbjct: 85 ELRFCPDTRVVIVRSLVDGVFCSGADLKERALMSQVEASQFVHSLRSSFTELETLQMPTI 144
Query: 136 AVLDGSAYGGGLEMALACDIRVAASNVRMGLVETKLAIIPGAGGTQRLPRIVGIPLA 192
A ++G A GGG EM LACD RVA+ + +MGL ET LAIIPGAGGTQRLPR++GIP A
Sbjct: 145 AAIEGVAVGGGTEMVLACDFRVASKSSKMGLPETGLAIIPGAGGTQRLPRLIGIPRA 201
>sp|O34893|YNGF_BACSU Putative enoyl-CoA hydratase/isomerase YngF OS=Bacillus subtilis
(strain 168) GN=yngF PE=3 SV=1
Length = 260
Score = 147 bits (371), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 69/138 (50%), Positives = 97/138 (70%)
Query: 51 LCMNRPQARNALNATLVEEILTAVEAIRGDEEVRCVLLRSLVKDVFCAGADLKHRLTLNE 110
+ +NRPQA NAL+A ++ + ++ I + +RCV+L + FCAGADLK R+ L E
Sbjct: 17 ITLNRPQAANALSAEMLRNLQMIIQEIEFNSNIRCVILTGTGEKAFCAGADLKERIKLKE 76
Query: 111 DQIRSFVSTLRYMTCQLESIPVPVLAVLDGSAYGGGLEMALACDIRVAASNVRMGLVETK 170
DQ+ VS ++ L+++P PV+A ++GSA GGGLE+ALACD+R+A +GL ET
Sbjct: 77 DQVLESVSLIQRTAALLDALPQPVIAAINGSALGGGLELALACDLRIATEAAVLGLPETG 136
Query: 171 LAIIPGAGGTQRLPRIVG 188
LAIIPGAGGTQRLPR++G
Sbjct: 137 LAIIPGAGGTQRLPRLIG 154
>sp|Q9JLZ3|AUHM_MOUSE Methylglutaconyl-CoA hydratase, mitochondrial OS=Mus musculus
GN=Auh PE=2 SV=1
Length = 314
Score = 144 bits (362), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 90/186 (48%), Positives = 123/186 (66%), Gaps = 5/186 (2%)
Query: 9 RLSPARVKVTKWP--NYSTSVSKEGRKLTQIIYHNSPERPGIVELCMNRPQARNALNATL 66
RL PA P YS+ V E + H E GIV L +NR +NAL+ L
Sbjct: 26 RLGPAAWARGTAPRRGYSSEVKTEDELR---VRHLEEENRGIVVLGINRAYGKNALSKNL 82
Query: 67 VEEILTAVEAIRGDEEVRCVLLRSLVKDVFCAGADLKHRLTLNEDQIRSFVSTLRYMTCQ 126
++ + AV+A++ D++VR +++RS V +FCAGADLK R ++ ++ FVS +R +
Sbjct: 83 LKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAGADLKERAKMHSSEVGPFVSKIRSVIND 142
Query: 127 LESIPVPVLAVLDGSAYGGGLEMALACDIRVAASNVRMGLVETKLAIIPGAGGTQRLPRI 186
+ ++PVP +A +DG A GGGLE+ALACDIRVAAS+ +MGLVETKLAIIPG GGTQRLPR
Sbjct: 143 IANLPVPTIAAIDGLALGGGLELALACDIRVAASSAKMGLVETKLAIIPGGGGTQRLPRA 202
Query: 187 VGIPLA 192
+G+ LA
Sbjct: 203 IGMSLA 208
>sp|Q13825|AUHM_HUMAN Methylglutaconyl-CoA hydratase, mitochondrial OS=Homo sapiens
GN=AUH PE=1 SV=1
Length = 339
Score = 142 bits (359), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 80/155 (51%), Positives = 113/155 (72%)
Query: 38 IYHNSPERPGIVELCMNRPQARNALNATLVEEILTAVEAIRGDEEVRCVLLRSLVKDVFC 97
+ H E GIV L +NR +N+L+ L++ + AV+A++ D++VR +++RS V +FC
Sbjct: 79 VRHLEEENRGIVVLGINRAYGKNSLSKNLIKMLSKAVDALKSDKKVRTIIIRSEVPGIFC 138
Query: 98 AGADLKHRLTLNEDQIRSFVSTLRYMTCQLESIPVPVLAVLDGSAYGGGLEMALACDIRV 157
AGADLK R ++ ++ FVS +R + + ++PVP +A +DG A GGGLE+ALACDIRV
Sbjct: 139 AGADLKERAKMSSSEVGPFVSKIRAVINDIANLPVPTIAAIDGLALGGGLELALACDIRV 198
Query: 158 AASNVRMGLVETKLAIIPGAGGTQRLPRIVGIPLA 192
AAS+ +MGLVETKLAIIPG GGTQRLPR +G+ LA
Sbjct: 199 AASSAKMGLVETKLAIIPGGGGTQRLPRAIGMSLA 233
>sp|A4YI89|HPCD_METS5 3-hydroxypropionyl-coenzyme A dehydratase OS=Metallosphaera sedula
(strain ATCC 51363 / DSM 5348) GN=Msed_2001 PE=1 SV=1
Length = 259
Score = 117 bits (293), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/138 (43%), Positives = 85/138 (61%), Gaps = 1/138 (0%)
Query: 51 LCMNRPQARNALNATLVEEILTAVEAIRGDEEVRCVLLRSLVKDVFCAGADLKHRLTLNE 110
+ +NRP NALNA L+EE+ AV D E+R +++ K FCAGAD+ L
Sbjct: 17 ITLNRPDKLNALNAKLLEELDRAVSQAESDPEIRVIIITGKGK-AFCAGADITQFNQLTP 75
Query: 111 DQIRSFVSTLRYMTCQLESIPVPVLAVLDGSAYGGGLEMALACDIRVAASNVRMGLVETK 170
+ F R + ++E++ P +A+++G A GGGLE+ALACDIR+AA ++GL E
Sbjct: 76 AEAWKFSKKGREIMDKIEALSKPTIAMINGYALGGGLELALACDIRIAAEEAQLGLPEIN 135
Query: 171 LAIIPGAGGTQRLPRIVG 188
L I PG GGTQRL R++G
Sbjct: 136 LGIYPGYGGTQRLTRVIG 153
>sp|P52046|CRT_CLOAB 3-hydroxybutyryl-CoA dehydratase OS=Clostridium acetobutylicum
(strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM
B-1787) GN=crt PE=3 SV=1
Length = 261
Score = 109 bits (273), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/150 (41%), Positives = 90/150 (60%), Gaps = 1/150 (0%)
Query: 44 ERPGIVEL-CMNRPQARNALNATLVEEILTAVEAIRGDEEVRCVLLRSLVKDVFCAGADL 102
E+ G V + +NRP+A NALN+ ++E+ + I D EV V+L + F AGAD+
Sbjct: 9 EKEGKVAVVTINRPKALNALNSDTLKEMDYVIGEIENDSEVLAVILTGAGEKSFVAGADI 68
Query: 103 KHRLTLNEDQIRSFVSTLRYMTCQLESIPVPVLAVLDGSAYGGGLEMALACDIRVAASNV 162
+N + R F + +LE + PV+A ++G A GGG E+A++CDIR+A+SN
Sbjct: 69 SEMKEMNTIEGRKFGILGNKVFRRLELLEKPVIAAVNGFALGGGCEIAMSCDIRIASSNA 128
Query: 163 RMGLVETKLAIIPGAGGTQRLPRIVGIPLA 192
R G E L I PG GGTQRL R+VG+ +A
Sbjct: 129 RFGQPEVGLGITPGFGGTQRLSRLVGMGMA 158
>sp|Q5QXH7|FADB_IDILO Fatty acid oxidation complex subunit alpha OS=Idiomarina loihiensis
(strain ATCC BAA-735 / DSM 15497 / L2-TR) GN=fadB PE=3
SV=1
Length = 718
Score = 106 bits (264), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/146 (40%), Positives = 83/146 (56%), Gaps = 3/146 (2%)
Query: 45 RPGIVELCMNRPQARNALNATLVEEILTAVEAIRGDEEVRCVLLRSLVKDVFCAGADLKH 104
PG EL + + N + +EE A+ ++ +++R V++ S K F GAD+
Sbjct: 14 EPGFAELQFDAKGSVNKFDQATLEEFSEALTKLQNTDDLRGVIVTS-SKSTFIVGADITE 72
Query: 105 RLTLNEDQ--IRSFVSTLRYMTCQLESIPVPVLAVLDGSAYGGGLEMALACDIRVAASNV 162
LTL DQ RS+V+ + QLE +PVP + + G A GGG E LACD RVA +
Sbjct: 73 FLTLFSDQEKTRSWVAKASRVFDQLEDLPVPTVGAVTGFALGGGCEALLACDYRVADTTA 132
Query: 163 RMGLVETKLAIIPGAGGTQRLPRIVG 188
+GL E KL +IPG GGT RLPR++G
Sbjct: 133 TIGLPEVKLGLIPGFGGTMRLPRVIG 158
>sp|Q8C753|K0556_MOUSE Uncharacterized protein KIAA0556 OS=Mus musculus GN=Kiaa0556 PE=2
SV=2
Length = 1610
Score = 105 bits (263), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 49/84 (58%), Positives = 60/84 (71%), Gaps = 4/84 (4%)
Query: 252 CGF----SLLNTWGDRYYLGLNGIELYDEFGDLIPLTAENIFAYPAGVHILHGMENDART 307
CGF LL++WGD YY+GL G+ELYDE G+ IPL+ NI A+P V+ L G+ D RT
Sbjct: 1389 CGFIFQFQLLSSWGDPYYIGLTGLELYDEHGERIPLSQNNIAAFPDSVNALEGVCGDVRT 1448
Query: 308 CDKLIDGVNNIADGTHSWLAPILP 331
DKLID VN+ +DG H WLAPILP
Sbjct: 1449 PDKLIDQVNDTSDGRHMWLAPILP 1472
Score = 72.4 bits (176), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 258 NTWGDRYYLGLNGIELYDEFGDLIPLTAENIFAYPAGVHILHGMENDARTCDKLIDGVNN 317
+TWGDR+Y+GLNGIE++ G+ P+ +I A P ++IL D R LIDGVN
Sbjct: 973 STWGDRHYVGLNGIEIFSSSGE--PVQISSITADPPDINILPAYGKDPRVVSNLIDGVNR 1030
Query: 318 IADGTHSWLAPILP 331
D H WLAP P
Sbjct: 1031 TQDDMHVWLAPFTP 1044
Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 46/78 (58%)
Query: 254 FSLLNTWGDRYYLGLNGIELYDEFGDLIPLTAENIFAYPAGVHILHGMENDARTCDKLID 313
+L +WGD +Y+GL G+E+ + G+ +P+ + A P ++ L +D+RT DKLID
Sbjct: 1205 LNLTASWGDLHYIGLTGLEVVGKDGEALPIQPHQLSASPRDLNDLPEYNDDSRTLDKLID 1264
Query: 314 GVNNIADGTHSWLAPILP 331
G+N + H WL P P
Sbjct: 1265 GMNITTEDEHMWLIPFSP 1282
Score = 42.0 bits (97), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 27/46 (58%)
Query: 208 DTRYMWCTPYRRGLVVTLVIKFSQPVHISALIVWNYNASIEMSYCG 253
D ++W P+ G+ T+ I+F+ P ++ + +WNYN S S+ G
Sbjct: 1033 DDMHVWLAPFTPGMTHTISIEFTHPCQVALIRIWNYNKSRIHSFRG 1078
Score = 41.2 bits (95), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 28/51 (54%)
Query: 206 SLDTRYMWCTPYRRGLVVTLVIKFSQPVHISALIVWNYNASIEMSYCGFSL 256
+ + +MW P+ GL ++I F + I+ L +WNYN S E +Y G +
Sbjct: 1269 TTEDEHMWLIPFSPGLDHVVMIHFDRAQSIAGLRLWNYNKSPEDTYRGVKI 1319
Score = 39.3 bits (90), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 43/112 (38%), Gaps = 12/112 (10%)
Query: 146 GLEMALACDIRVAASNVRMGLVETKLAIIPGAGGTQRLPRIVGIPLAALYEDLLNNDCMS 205
GLE+ R+ S + + + G G R P D L +
Sbjct: 1411 GLELYDEHGERIPLSQNNIAAFPDSVNALEGVCGDVRTP------------DKLIDQVND 1458
Query: 206 SLDTRYMWCTPYRRGLVVTLVIKFSQPVHISALIVWNYNASIEMSYCGFSLL 257
+ D R+MW P GLV + + F P +S + +WNY + + F LL
Sbjct: 1459 TSDGRHMWLAPILPGLVNRVYVIFDLPTTVSMIKLWNYTKTPQRGVKEFGLL 1510
>sp|O60303|K0556_HUMAN Uncharacterized protein KIAA0556 OS=Homo sapiens GN=KIAA0556 PE=1
SV=4
Length = 1618
Score = 105 bits (261), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 49/84 (58%), Positives = 59/84 (70%), Gaps = 4/84 (4%)
Query: 252 CGF----SLLNTWGDRYYLGLNGIELYDEFGDLIPLTAENIFAYPAGVHILHGMENDART 307
CGF LL +WGD YY+GL G+ELYDE G+ IPL+ NI A+P V+ L G+ D RT
Sbjct: 1398 CGFIFQFQLLTSWGDPYYIGLTGLELYDERGEKIPLSENNIAAFPDSVNSLEGVGGDVRT 1457
Query: 308 CDKLIDGVNNIADGTHSWLAPILP 331
DKLID VN+ +DG H WLAPILP
Sbjct: 1458 PDKLIDQVNDTSDGRHMWLAPILP 1481
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Query: 254 FSLLNTWGDRYYLGLNGIELYDEFGDLIPLTAENIFAYPAGVHILHGMENDARTCDKLID 313
+ +TWGDR+Y+GLNGIE++ G+ P+ NI A P ++IL D R LID
Sbjct: 979 IDIKSTWGDRHYVGLNGIEIFSSKGE--PVQISNIKADPPDINILPAYGKDPRVVTNLID 1036
Query: 314 GVNNIADGTHSWLAPI 329
GVN D H WLAP
Sbjct: 1037 GVNRTQDDMHVWLAPF 1052
Score = 62.0 bits (149), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 41/73 (56%)
Query: 259 TWGDRYYLGLNGIELYDEFGDLIPLTAENIFAYPAGVHILHGMENDARTCDKLIDGVNNI 318
+WGD +YLGL G+E+ + G +P+ I A P ++ L +D+R DKLIDG N
Sbjct: 1219 SWGDLHYLGLTGLEVVGKEGQALPIHLHQISASPRDLNELPEYSDDSRALDKLIDGTNIT 1278
Query: 319 ADGTHSWLAPILP 331
+ H WL P P
Sbjct: 1279 MEDEHMWLIPFSP 1291
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 27/46 (58%)
Query: 208 DTRYMWCTPYRRGLVVTLVIKFSQPVHISALIVWNYNASIEMSYCG 253
D ++W P+ RG ++ I F+ P H++ + +WNYN S S+ G
Sbjct: 1043 DDMHVWLAPFTRGRSHSITIDFTHPCHVALIRIWNYNKSRIHSFRG 1088
Score = 40.4 bits (93), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 29/53 (54%)
Query: 206 SLDTRYMWCTPYRRGLVVTLVIKFSQPVHISALIVWNYNASIEMSYCGFSLLN 258
+++ +MW P+ GL + I+ + I+ L WNYN S E +Y G +++
Sbjct: 1278 TMEDEHMWLIPFSPGLDHVVTIRLDRAESIAGLRFWNYNKSPEDTYRGAKIVH 1330
Score = 39.7 bits (91), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 40/102 (39%), Gaps = 19/102 (18%)
Query: 163 RMGLVETKLAIIP-------GAGGTQRLPRIVGIPLAALYEDLLNNDCMSSLDTRYMWCT 215
++ L E +A P G GG R P D L + + D R+MW
Sbjct: 1430 KIPLSENNIAAFPDSVNSLEGVGGDVRTP------------DKLIDQVNDTSDGRHMWLA 1477
Query: 216 PYRRGLVVTLVIKFSQPVHISALIVWNYNASIEMSYCGFSLL 257
P GLV + + F P +S + +WNY + F LL
Sbjct: 1478 PILPGLVNRVYVIFDLPTTVSMIKLWNYAKTPHRGVKEFGLL 1519
>sp|Q7MZ92|FADB_PHOLL Fatty acid oxidation complex subunit alpha OS=Photorhabdus
luminescens subsp. laumondii (strain TT01) GN=fadB PE=3
SV=1
Length = 728
Score = 103 bits (257), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 85/147 (57%), Gaps = 4/147 (2%)
Query: 45 RPGIVELCMNRPQARNALNATLVEEILTAVEAIRGDEEVRCVLLRSLVKDVFCAGADLKH 104
+ GI EL N P A N L+ V + A+ ++ ++ VLLRS K F GAD+
Sbjct: 14 KDGIAELVFNAPAAINKLDTKTVASLDKAIASLEQQTGLKGVLLRS-EKTAFIVGADITE 72
Query: 105 RLTLNEDQIRSFVSTLRYMTC---QLESIPVPVLAVLDGSAYGGGLEMALACDIRVAASN 161
L+L + + L + ++E +PVP ++ ++G A GGG E L+ D RVA+ +
Sbjct: 73 FLSLFDSPVEKLQEWLNFSNSIFNRIEDLPVPTISAINGYALGGGCECVLSTDFRVASPD 132
Query: 162 VRMGLVETKLAIIPGAGGTQRLPRIVG 188
+R+GL ETKL I+PG GG+ RLPR++G
Sbjct: 133 IRIGLPETKLGIMPGFGGSVRLPRLIG 159
>sp|B4SZ85|FADB_SALNS Fatty acid oxidation complex subunit alpha OS=Salmonella newport
(strain SL254) GN=fadB PE=3 SV=1
Length = 729
Score = 102 bits (255), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/145 (40%), Positives = 87/145 (60%), Gaps = 4/145 (2%)
Query: 47 GIVELCMNRPQARNALNATLVEEILTAVEAIRGDEEVRCVLLRSLVKDVFCAGADLKHRL 106
GI EL + P + N L+ V + A+E + +++ +LLRS K F GAD+ L
Sbjct: 16 GIAELVFDAPGSVNKLDTATVASLGQALEVLEKQHDLKGLLLRS-NKAAFIVGADITEFL 74
Query: 107 TL---NEDQIRSFVSTLRYMTCQLESIPVPVLAVLDGSAYGGGLEMALACDIRVAASNVR 163
+L E+Q+ ++ + +LE +PVP LA ++G A GGG E LA D R+A ++R
Sbjct: 75 SLFLVPEEQLSQWLHFANSVFNRLEDLPVPTLAAVNGYALGGGCECVLATDYRLATPDLR 134
Query: 164 MGLVETKLAIIPGAGGTQRLPRIVG 188
+GL ETKL I+PG GG+ RLPR++G
Sbjct: 135 IGLPETKLGIMPGFGGSVRLPRMLG 159
>sp|B5EZW0|FADB_SALA4 Fatty acid oxidation complex subunit alpha OS=Salmonella agona
(strain SL483) GN=fadB PE=3 SV=1
Length = 729
Score = 102 bits (255), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/145 (40%), Positives = 87/145 (60%), Gaps = 4/145 (2%)
Query: 47 GIVELCMNRPQARNALNATLVEEILTAVEAIRGDEEVRCVLLRSLVKDVFCAGADLKHRL 106
GI EL + P + N L+ V + A+E + +++ +LLRS K F GAD+ L
Sbjct: 16 GIAELVFDAPGSVNKLDTATVASLGQALEVLEKQHDLKGLLLRS-NKAAFIVGADITEFL 74
Query: 107 TL---NEDQIRSFVSTLRYMTCQLESIPVPVLAVLDGSAYGGGLEMALACDIRVAASNVR 163
+L E+Q+ ++ + +LE +PVP LA ++G A GGG E LA D R+A ++R
Sbjct: 75 SLFLVPEEQLSQWLHFANSVFNRLEDLPVPTLAAVNGYALGGGCECVLATDYRLATPDLR 134
Query: 164 MGLVETKLAIIPGAGGTQRLPRIVG 188
+GL ETKL I+PG GG+ RLPR++G
Sbjct: 135 IGLPETKLGIMPGFGGSVRLPRMLG 159
>sp|A9MYB0|FADB_SALPB Fatty acid oxidation complex subunit alpha OS=Salmonella paratyphi
B (strain ATCC BAA-1250 / SPB7) GN=fadB PE=3 SV=1
Length = 729
Score = 102 bits (254), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/145 (40%), Positives = 87/145 (60%), Gaps = 4/145 (2%)
Query: 47 GIVELCMNRPQARNALNATLVEEILTAVEAIRGDEEVRCVLLRSLVKDVFCAGADLKHRL 106
GI EL + P + N L+ V + A+E + +++ +LLRS K F GAD+ L
Sbjct: 16 GIAELVFDAPGSVNKLDTATVASLGQALEVLEKQHDLKGLLLRS-NKAAFIVGADITEFL 74
Query: 107 TL---NEDQIRSFVSTLRYMTCQLESIPVPVLAVLDGSAYGGGLEMALACDIRVAASNVR 163
+L E+Q+ ++ + +LE +PVP LA ++G A GGG E LA D R+A ++R
Sbjct: 75 SLFLVPEEQLSQWLHFANSVFNRLEDLPVPTLAAVNGYALGGGCECVLATDYRLATPDLR 134
Query: 164 MGLVETKLAIIPGAGGTQRLPRIVG 188
+GL ETKL I+PG GG+ RLPR++G
Sbjct: 135 IGLPETKLGIMPGFGGSVRLPRMLG 159
>sp|Q57HM6|FADB_SALCH Fatty acid oxidation complex subunit alpha OS=Salmonella
choleraesuis (strain SC-B67) GN=fadB PE=3 SV=2
Length = 729
Score = 102 bits (254), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/145 (40%), Positives = 87/145 (60%), Gaps = 4/145 (2%)
Query: 47 GIVELCMNRPQARNALNATLVEEILTAVEAIRGDEEVRCVLLRSLVKDVFCAGADLKHRL 106
GI EL + P + N L+ V + A+E + +++ +LLRS K F GAD+ L
Sbjct: 16 GIAELVFDAPGSVNKLDTATVASLGQALEVLEKQHDLKGLLLRS-NKAAFIVGADITEFL 74
Query: 107 TL---NEDQIRSFVSTLRYMTCQLESIPVPVLAVLDGSAYGGGLEMALACDIRVAASNVR 163
+L E+Q+ ++ + +LE +PVP LA ++G A GGG E LA D R+A ++R
Sbjct: 75 SLFLVPEEQLSQWLHFANSVFNRLEDLPVPTLAAVNGYALGGGCECVLATDYRLATPDLR 134
Query: 164 MGLVETKLAIIPGAGGTQRLPRIVG 188
+GL ETKL I+PG GG+ RLPR++G
Sbjct: 135 IGLPETKLGIMPGFGGSVRLPRMLG 159
>sp|Q9L6L5|FADB_SALTY Fatty acid oxidation complex subunit alpha OS=Salmonella
typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
GN=fadB PE=3 SV=1
Length = 729
Score = 102 bits (254), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/145 (40%), Positives = 87/145 (60%), Gaps = 4/145 (2%)
Query: 47 GIVELCMNRPQARNALNATLVEEILTAVEAIRGDEEVRCVLLRSLVKDVFCAGADLKHRL 106
GI EL + P + N L+ V + A+E + +++ +LLRS K F GAD+ L
Sbjct: 16 GIAELVFDAPGSVNKLDTATVASLGQALEVLEKQHDLKGLLLRS-NKAAFIVGADITEFL 74
Query: 107 TL---NEDQIRSFVSTLRYMTCQLESIPVPVLAVLDGSAYGGGLEMALACDIRVAASNVR 163
+L E+Q+ ++ + +LE +PVP LA ++G A GGG E LA D R+A ++R
Sbjct: 75 SLFLVPEEQLSQWLHFANSVFNRLEDLPVPTLAAVNGYALGGGCECVLATDYRLATPDLR 134
Query: 164 MGLVETKLAIIPGAGGTQRLPRIVG 188
+GL ETKL I+PG GG+ RLPR++G
Sbjct: 135 IGLPETKLGIMPGFGGSVRLPRMLG 159
>sp|B5RFL6|FADB_SALG2 Fatty acid oxidation complex subunit alpha OS=Salmonella gallinarum
(strain 287/91 / NCTC 13346) GN=fadB PE=3 SV=1
Length = 729
Score = 102 bits (254), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/145 (40%), Positives = 87/145 (60%), Gaps = 4/145 (2%)
Query: 47 GIVELCMNRPQARNALNATLVEEILTAVEAIRGDEEVRCVLLRSLVKDVFCAGADLKHRL 106
GI EL + P + N L+ V + A+E + +++ +LLRS K F GAD+ L
Sbjct: 16 GIAELVFDAPGSVNKLDTATVASLGQALEVLEKQHDLKGLLLRS-NKAAFIVGADITEFL 74
Query: 107 TL---NEDQIRSFVSTLRYMTCQLESIPVPVLAVLDGSAYGGGLEMALACDIRVAASNVR 163
+L E+Q+ ++ + +LE +PVP LA ++G A GGG E LA D R+A ++R
Sbjct: 75 SLFLVPEEQLSQWLHFANSVFNRLEDLPVPTLAAVNGYALGGGCECVLATDYRLATPDLR 134
Query: 164 MGLVETKLAIIPGAGGTQRLPRIVG 188
+GL ETKL I+PG GG+ RLPR++G
Sbjct: 135 IGLPETKLGIMPGFGGSVRLPRMLG 159
>sp|B5QW85|FADB_SALEP Fatty acid oxidation complex subunit alpha OS=Salmonella
enteritidis PT4 (strain P125109) GN=fadB PE=3 SV=1
Length = 729
Score = 102 bits (254), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/145 (40%), Positives = 87/145 (60%), Gaps = 4/145 (2%)
Query: 47 GIVELCMNRPQARNALNATLVEEILTAVEAIRGDEEVRCVLLRSLVKDVFCAGADLKHRL 106
GI EL + P + N L+ V + A+E + +++ +LLRS K F GAD+ L
Sbjct: 16 GIAELVFDAPGSVNKLDTATVASLGQALEVLEKQHDLKGLLLRS-NKAAFIVGADITEFL 74
Query: 107 TL---NEDQIRSFVSTLRYMTCQLESIPVPVLAVLDGSAYGGGLEMALACDIRVAASNVR 163
+L E+Q+ ++ + +LE +PVP LA ++G A GGG E LA D R+A ++R
Sbjct: 75 SLFLVPEEQLSQWLHFANSVFNRLEDLPVPTLAAVNGYALGGGCECVLATDYRLATPDLR 134
Query: 164 MGLVETKLAIIPGAGGTQRLPRIVG 188
+GL ETKL I+PG GG+ RLPR++G
Sbjct: 135 IGLPETKLGIMPGFGGSVRLPRMLG 159
>sp|Q8Z3C6|FADB_SALTI Fatty acid oxidation complex subunit alpha OS=Salmonella typhi
GN=fadB PE=3 SV=1
Length = 729
Score = 102 bits (254), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/145 (40%), Positives = 87/145 (60%), Gaps = 4/145 (2%)
Query: 47 GIVELCMNRPQARNALNATLVEEILTAVEAIRGDEEVRCVLLRSLVKDVFCAGADLKHRL 106
GI EL + P + N L+ V + A+E + +++ +LLRS K F GAD+ L
Sbjct: 16 GIAELVFDAPGSVNKLDTATVASLGQALEVLEKQHDLKGLLLRS-NKAAFIVGADITEFL 74
Query: 107 TL---NEDQIRSFVSTLRYMTCQLESIPVPVLAVLDGSAYGGGLEMALACDIRVAASNVR 163
+L E+Q+ ++ + +LE +PVP LA ++G A GGG E LA D R+A ++R
Sbjct: 75 SLFLVPEEQLSQWLHFANSVFNRLEDLPVPTLAAVNGYALGGGCECVLATDYRLATPDLR 134
Query: 164 MGLVETKLAIIPGAGGTQRLPRIVG 188
+GL ETKL I+PG GG+ RLPR++G
Sbjct: 135 IGLPETKLGIMPGFGGSVRLPRMLG 159
>sp|B5BIZ0|FADB_SALPK Fatty acid oxidation complex subunit alpha OS=Salmonella paratyphi
A (strain AKU_12601) GN=fadB PE=3 SV=1
Length = 725
Score = 102 bits (254), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/145 (40%), Positives = 87/145 (60%), Gaps = 4/145 (2%)
Query: 47 GIVELCMNRPQARNALNATLVEEILTAVEAIRGDEEVRCVLLRSLVKDVFCAGADLKHRL 106
GI EL + P + N L+ V + A+E + +++ +LLRS K F GAD+ L
Sbjct: 16 GIAELVFDAPGSVNKLDTATVASLGQALEVLEKQHDLKGLLLRS-NKAAFIVGADITEFL 74
Query: 107 TL---NEDQIRSFVSTLRYMTCQLESIPVPVLAVLDGSAYGGGLEMALACDIRVAASNVR 163
+L E+Q+ ++ + +LE +PVP LA ++G A GGG E LA D R+A ++R
Sbjct: 75 SLFLVPEEQLSQWLHFANSVFNRLEDLPVPTLAAVNGYALGGGCECVLATDYRLATPDLR 134
Query: 164 MGLVETKLAIIPGAGGTQRLPRIVG 188
+GL ETKL I+PG GG+ RLPR++G
Sbjct: 135 IGLPETKLGIMPGFGGSVRLPRMLG 159
>sp|Q5PKQ2|FADB_SALPA Fatty acid oxidation complex subunit alpha OS=Salmonella paratyphi
A (strain ATCC 9150 / SARB42) GN=fadB PE=3 SV=1
Length = 725
Score = 102 bits (254), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/145 (40%), Positives = 87/145 (60%), Gaps = 4/145 (2%)
Query: 47 GIVELCMNRPQARNALNATLVEEILTAVEAIRGDEEVRCVLLRSLVKDVFCAGADLKHRL 106
GI EL + P + N L+ V + A+E + +++ +LLRS K F GAD+ L
Sbjct: 16 GIAELVFDAPGSVNKLDTATVASLGQALEVLEKQHDLKGLLLRS-NKAAFIVGADITEFL 74
Query: 107 TL---NEDQIRSFVSTLRYMTCQLESIPVPVLAVLDGSAYGGGLEMALACDIRVAASNVR 163
+L E+Q+ ++ + +LE +PVP LA ++G A GGG E LA D R+A ++R
Sbjct: 75 SLFLVPEEQLSQWLHFANSVFNRLEDLPVPTLAAVNGYALGGGCECVLATDYRLATPDLR 134
Query: 164 MGLVETKLAIIPGAGGTQRLPRIVG 188
+GL ETKL I+PG GG+ RLPR++G
Sbjct: 135 IGLPETKLGIMPGFGGSVRLPRMLG 159
>sp|P94549|FADB_BACSU Probable enoyl-CoA hydratase OS=Bacillus subtilis (strain 168)
GN=fadB PE=2 SV=1
Length = 258
Score = 102 bits (253), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 56/143 (39%), Positives = 90/143 (62%), Gaps = 3/143 (2%)
Query: 51 LCMNRPQARNALNATLVEEILTAVEAIRGDEEVRCVLLRSLVKDVFCAGADLKHRLTLNE 110
L ++ P A NAL++ ++EE+ + ++ D VR +++ + F AGAD+K +L
Sbjct: 15 LTIHNPPA-NALSSRILEELSSCLDQCETDAGVRSIIIHGEGR-FFSAGADIKEFTSLKG 72
Query: 111 DQIRSFVSTL-RYMTCQLESIPVPVLAVLDGSAYGGGLEMALACDIRVAASNVRMGLVET 169
++ S ++ + + ++ES P P++A + G+A GGGLE+A+AC IR+AA + ++GL E
Sbjct: 73 NEDSSLLAERGQQLMERIESFPKPIIAAIHGAALGGGLELAMACHIRIAAEDAKLGLPEL 132
Query: 170 KLAIIPGAGGTQRLPRIVGIPLA 192
L IIPG GTQRLPR VG A
Sbjct: 133 NLGIIPGFAGTQRLPRYVGTAKA 155
>sp|B4TNZ1|FADB_SALSV Fatty acid oxidation complex subunit alpha OS=Salmonella
schwarzengrund (strain CVM19633) GN=fadB PE=3 SV=1
Length = 729
Score = 101 bits (252), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 57/145 (39%), Positives = 87/145 (60%), Gaps = 4/145 (2%)
Query: 47 GIVELCMNRPQARNALNATLVEEILTAVEAIRGDEEVRCVLLRSLVKDVFCAGADLKHRL 106
GI EL + P + N L+ V + A+E + +++ +LLRS K F GAD+ L
Sbjct: 16 GIAELVFDAPGSVNKLDTATVASLGQALEVLEKQHDLKGLLLRS-NKAAFIVGADITEFL 74
Query: 107 TL---NEDQIRSFVSTLRYMTCQLESIPVPVLAVLDGSAYGGGLEMALACDIRVAASNVR 163
+L E+Q+ ++ + +LE +PVP LA ++G A GGG E LA D R+A ++R
Sbjct: 75 SLFLVPEEQLSQWLHFANSVFNRLEDLPVPTLAAVNGYALGGGCECVLATDYRLATPDLR 134
Query: 164 MGLVETKLAIIPGAGGTQRLPRIVG 188
+GL ETKL I+PG GG+ R+PR++G
Sbjct: 135 IGLPETKLGIMPGFGGSVRMPRMLG 159
>sp|A9KU91|FADB_SHEB9 Fatty acid oxidation complex subunit alpha OS=Shewanella baltica
(strain OS195) GN=fadB PE=3 SV=1
Length = 716
Score = 101 bits (251), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 83/144 (57%), Gaps = 4/144 (2%)
Query: 48 IVELCMNRPQARNALNATLVEEILTAVEAIRGDEEVRCVLLRSLVKDVFCAGADLKHRLT 107
I +LC N P + N + + + A+++I+ D ++ ++L S KD F GAD+ L
Sbjct: 17 IAKLCFNAPGSVNKFDRETLASLDAALDSIKQDSNIKALVLTS-SKDTFIVGADITEFLG 75
Query: 108 L---NEDQIRSFVSTLRYMTCQLESIPVPVLAVLDGSAYGGGLEMALACDIRVAASNVRM 164
L ++ + S+V + +LE +P P + + G A GGG E LA D RVA + ++
Sbjct: 76 LFAQDDAVLLSWVEQANAVFNKLEDLPFPTASAIKGFALGGGCETILATDFRVADTTAKI 135
Query: 165 GLVETKLAIIPGAGGTQRLPRIVG 188
GL ETKL IIPG GGT RLPR++G
Sbjct: 136 GLPETKLGIIPGFGGTVRLPRVIG 159
>sp|Q08A39|FADB_SHEFN Fatty acid oxidation complex subunit alpha OS=Shewanella
frigidimarina (strain NCIMB 400) GN=fadB PE=3 SV=1
Length = 716
Score = 100 bits (250), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/144 (37%), Positives = 85/144 (59%), Gaps = 4/144 (2%)
Query: 48 IVELCMNRPQARNALNATLVEEILTAVEAIRGDEEVRCVLLRSLVKDVFCAGADLKHRLT 107
I +LC N + N + + + A+++I+ + ++ +LL S K F GAD+ LT
Sbjct: 17 IAKLCFNAQGSVNKFDRETIASLDAALDSIKQNTNIKALLLTS-AKSTFIVGADITEFLT 75
Query: 108 L---NEDQIRSFVSTLRYMTCQLESIPVPVLAVLDGSAYGGGLEMALACDIRVAASNVRM 164
L ++ + ++V + +LE +P P + ++G A GGG E LA D+RVA +N R+
Sbjct: 76 LFQQDDATLLAWVEQANAVFNKLEDLPFPTASAINGFALGGGCETILATDLRVADTNARI 135
Query: 165 GLVETKLAIIPGAGGTQRLPRIVG 188
GL ETKL +IPG GGT RLPR++G
Sbjct: 136 GLPETKLGLIPGFGGTVRLPRVIG 159
>sp|Q88L02|FADB_PSEPK Fatty acid oxidation complex subunit alpha OS=Pseudomonas putida
(strain KT2440) GN=fadB PE=3 SV=1
Length = 715
Score = 100 bits (249), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/146 (41%), Positives = 86/146 (58%), Gaps = 5/146 (3%)
Query: 47 GIVELCMN-RPQARNALNATLVEEILTAVEAIRGDEEVRCVLLRSLVKDVFCAGADLKH- 104
GIVEL + + ++ N N + E+ AV+AIR D V+ V++RS KDVF GAD+
Sbjct: 16 GIVELKFDLKGESVNKFNRLTLNELRQAVDAIRADASVKGVIVRS-GKDVFIVGADITEF 74
Query: 105 --RLTLNEDQIRSFVSTLRYMTCQLESIPVPVLAVLDGSAYGGGLEMALACDIRVAASNV 162
L E ++ + + E + VP +A ++G A GGGLEM LA D RV +++
Sbjct: 75 VDNFKLPEAELVAGNLEANRIFNAFEDLEVPTVAAINGIALGGGLEMCLAADYRVMSTSA 134
Query: 163 RMGLVETKLAIIPGAGGTQRLPRIVG 188
R+GL E KL I PG GGT RLPR++G
Sbjct: 135 RIGLPEVKLGIYPGFGGTVRLPRLIG 160
>sp|A6WHA0|FADB_SHEB8 Fatty acid oxidation complex subunit alpha OS=Shewanella baltica
(strain OS185) GN=fadB PE=3 SV=1
Length = 716
Score = 100 bits (249), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/144 (37%), Positives = 83/144 (57%), Gaps = 4/144 (2%)
Query: 48 IVELCMNRPQARNALNATLVEEILTAVEAIRGDEEVRCVLLRSLVKDVFCAGADLKHRLT 107
I +LC N P + N + + + A+++I+ D ++ ++L S KD F GAD+ L
Sbjct: 17 IAKLCFNAPGSVNKFDRETLASLDAALDSIKQDSNIKALVLTS-SKDTFIVGADITEFLG 75
Query: 108 L---NEDQIRSFVSTLRYMTCQLESIPVPVLAVLDGSAYGGGLEMALACDIRVAASNVRM 164
L ++ + S+V + +LE +P P + + G A GGG E LA D R+A + ++
Sbjct: 76 LFAQDDAVLLSWVEQANAVFNKLEDLPFPTASAIKGFALGGGCETILATDFRIADTTAKI 135
Query: 165 GLVETKLAIIPGAGGTQRLPRIVG 188
GL ETKL IIPG GGT RLPR++G
Sbjct: 136 GLPETKLGIIPGFGGTVRLPRVIG 159
>sp|A3CYJ4|FADB_SHEB5 Fatty acid oxidation complex subunit alpha OS=Shewanella baltica
(strain OS155 / ATCC BAA-1091) GN=fadB PE=3 SV=1
Length = 716
Score = 100 bits (249), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/144 (37%), Positives = 83/144 (57%), Gaps = 4/144 (2%)
Query: 48 IVELCMNRPQARNALNATLVEEILTAVEAIRGDEEVRCVLLRSLVKDVFCAGADLKHRLT 107
I +LC N P + N + + + A+++I+ D ++ ++L S KD F GAD+ L
Sbjct: 17 IAKLCFNAPGSVNKFDRETLTSLDAALDSIKQDSNIKALVLTS-SKDTFIVGADITEFLG 75
Query: 108 L---NEDQIRSFVSTLRYMTCQLESIPVPVLAVLDGSAYGGGLEMALACDIRVAASNVRM 164
L ++ + S+V + +LE +P P + + G A GGG E LA D R+A + ++
Sbjct: 76 LFAQDDAVLLSWVEQANAVFNKLEDLPFPTASAIKGFALGGGCETILATDFRIADTTAKI 135
Query: 165 GLVETKLAIIPGAGGTQRLPRIVG 188
GL ETKL IIPG GGT RLPR++G
Sbjct: 136 GLPETKLGIIPGFGGTVRLPRVIG 159
>sp|A8G8D1|FADB_SERP5 Fatty acid oxidation complex subunit alpha OS=Serratia
proteamaculans (strain 568) GN=fadB PE=3 SV=1
Length = 729
Score = 100 bits (248), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 87/145 (60%), Gaps = 4/145 (2%)
Query: 47 GIVELCMNRPQARNALNATLVEEILTAVEAIRGDEEVRCVLLRSLVKDVFCAGADLKHRL 106
GI EL N P + N L+ V + A+ + E++ +LLRS K F GAD+ L
Sbjct: 16 GIAELVFNAPGSVNKLDTRTVASLGEALAVLEKQTELKGLLLRS-TKAAFIVGADITEFL 74
Query: 107 TL---NEDQIRSFVSTLRYMTCQLESIPVPVLAVLDGSAYGGGLEMALACDIRVAASNVR 163
+L ++++ +++ + +LE +PVP ++ ++G A GGG E LA D RVA+ + R
Sbjct: 75 SLFAAPAEKLQEWLNFANAIFNRLEDLPVPTISAINGYALGGGCECILATDFRVASPDAR 134
Query: 164 MGLVETKLAIIPGAGGTQRLPRIVG 188
+GL ETKL I+PG GG+ RLPR++G
Sbjct: 135 IGLPETKLGIMPGFGGSVRLPRLLG 159
>sp|B0TLB9|FADB_SHEHH Fatty acid oxidation complex subunit alpha OS=Shewanella
halifaxensis (strain HAW-EB4) GN=fadB PE=3 SV=1
Length = 717
Score = 99.8 bits (247), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/144 (37%), Positives = 83/144 (57%), Gaps = 4/144 (2%)
Query: 48 IVELCMNRPQARNALNATLVEEILTAVEAIRGDEEVRCVLLRSLVKDVFCAGADLKHRLT 107
I LC + N + ++ + A+++I+ D ++ ++L S KD F GAD+ L
Sbjct: 17 IAHLCFKAQGSVNKFDRETIDSLNAALDSIKQDTSIKALMLSS-AKDAFIVGADITEFLG 75
Query: 108 L--NEDQI-RSFVSTLRYMTCQLESIPVPVLAVLDGSAYGGGLEMALACDIRVAASNVRM 164
L ED + +S++ + +LE +P P L+ ++G A G G E LA D R+A + R+
Sbjct: 76 LFAEEDAVLQSWLEQANVVFNKLEDLPFPTLSAINGFALGAGCETILATDFRIADTTARI 135
Query: 165 GLVETKLAIIPGAGGTQRLPRIVG 188
GL ETKL IIPG GGT RLPR++G
Sbjct: 136 GLPETKLGIIPGFGGTVRLPRVIG 159
>sp|A8GYG0|FADB_SHEPA Fatty acid oxidation complex subunit alpha OS=Shewanella pealeana
(strain ATCC 700345 / ANG-SQ1) GN=fadB PE=3 SV=1
Length = 717
Score = 99.8 bits (247), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 83/144 (57%), Gaps = 4/144 (2%)
Query: 48 IVELCMNRPQARNALNATLVEEILTAVEAIRGDEEVRCVLLRSLVKDVFCAGADLKHRLT 107
I LC + N + ++ + A+++I+ D ++ ++L S KD F GAD+ L
Sbjct: 17 IAHLCFKAQGSVNKFDRETIDSLNAALDSIKQDSSIKALMLSS-AKDAFVVGADITEFLG 75
Query: 108 L--NEDQI-RSFVSTLRYMTCQLESIPVPVLAVLDGSAYGGGLEMALACDIRVAASNVRM 164
L ED + +S++ + +LE +P P ++ ++G A G G E LA D R+A + R+
Sbjct: 76 LFAEEDTVLQSWLEQANVVFNKLEDLPFPTISAINGFALGAGCETILATDFRIADTTARI 135
Query: 165 GLVETKLAIIPGAGGTQRLPRIVG 188
GL ETKL IIPG GGT RLPR++G
Sbjct: 136 GLPETKLGIIPGFGGTVRLPRVIG 159
>sp|Q32A21|FADB_SHIDS Fatty acid oxidation complex subunit alpha OS=Shigella dysenteriae
serotype 1 (strain Sd197) GN=fadB PE=3 SV=1
Length = 729
Score = 99.0 bits (245), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 86/145 (59%), Gaps = 4/145 (2%)
Query: 47 GIVELCMNRPQARNALNATLVEEILTAVEAIRGDEEVRCVLLRSLVKDVFCAGADLKHRL 106
GI EL + P + N L+ V + A+ + +++ +LLRS K F GAD+ L
Sbjct: 16 GIAELVFDAPSSVNKLDTATVASLGEAIGVLEQQSDLKGLLLRS-NKAAFIVGADITEFL 74
Query: 107 TL---NEDQIRSFVSTLRYMTCQLESIPVPVLAVLDGSAYGGGLEMALACDIRVAASNVR 163
+L E+Q+ ++ + +LE +PVP +A ++G A GGG E LA D R+A ++R
Sbjct: 75 SLFLVPEEQLSQWLHFANSVFNRLEDLPVPTIAAVNGYALGGGCECVLATDYRLATPDLR 134
Query: 164 MGLVETKLAIIPGAGGTQRLPRIVG 188
+GL ETKL I+PG GG+ R+PR++G
Sbjct: 135 IGLPETKLGIMPGFGGSVRMPRMLG 159
>sp|A6TGM4|FADB_KLEP7 Fatty acid oxidation complex subunit alpha OS=Klebsiella pneumoniae
subsp. pneumoniae (strain ATCC 700721 / MGH 78578)
GN=fadB PE=3 SV=1
Length = 729
Score = 99.0 bits (245), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 87/145 (60%), Gaps = 4/145 (2%)
Query: 47 GIVELCMNRPQARNALNATLVEEILTAVEAIRGDEEVRCVLLRSLVKDVFCAGADLKHRL 106
GI EL + P + N L+ V + A++ + +++ +LLRS K F GAD+ L
Sbjct: 16 GIAELVFDAPGSVNKLDTATVASLGHALDVLEKQSDLKGLLLRS-EKAAFIVGADITEFL 74
Query: 107 TL---NEDQIRSFVSTLRYMTCQLESIPVPVLAVLDGSAYGGGLEMALACDIRVAASNVR 163
+L E+Q+ ++ + +LE +PVP ++ ++G A GGG E LA D R+A ++R
Sbjct: 75 SLFLVPEEQLSQWLHFANSVFNRLEDLPVPTISAVNGYALGGGCECVLATDYRLATPDLR 134
Query: 164 MGLVETKLAIIPGAGGTQRLPRIVG 188
+GL ETKL I+PG GG+ RLPR++G
Sbjct: 135 IGLPETKLGIMPGFGGSVRLPRLLG 159
>sp|B5XYH0|FADB_KLEP3 Fatty acid oxidation complex subunit alpha OS=Klebsiella pneumoniae
(strain 342) GN=fadB PE=3 SV=1
Length = 729
Score = 99.0 bits (245), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 87/145 (60%), Gaps = 4/145 (2%)
Query: 47 GIVELCMNRPQARNALNATLVEEILTAVEAIRGDEEVRCVLLRSLVKDVFCAGADLKHRL 106
GI EL + P + N L+ V + A++ + +++ +LLRS K F GAD+ L
Sbjct: 16 GIAELVFDAPGSVNKLDTATVASLGHALDVLEKQNDLKGLLLRS-EKAAFIVGADITEFL 74
Query: 107 TL---NEDQIRSFVSTLRYMTCQLESIPVPVLAVLDGSAYGGGLEMALACDIRVAASNVR 163
+L E+Q+ ++ + +LE +PVP ++ ++G A GGG E LA D R+A ++R
Sbjct: 75 SLFLVPEEQLSQWLHFANSVFNRLEDLPVPTISAVNGYALGGGCECVLATDYRLATPDLR 134
Query: 164 MGLVETKLAIIPGAGGTQRLPRIVG 188
+GL ETKL I+PG GG+ RLPR++G
Sbjct: 135 IGLPETKLGIMPGFGGSVRLPRLLG 159
>sp|A1JIG4|FADB_YERE8 Fatty acid oxidation complex subunit alpha OS=Yersinia
enterocolitica serotype O:8 / biotype 1B (strain 8081)
GN=fadB PE=3 SV=1
Length = 729
Score = 99.0 bits (245), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 95/166 (57%), Gaps = 8/166 (4%)
Query: 47 GIVELCMNRPQARNALNATLVEEILTAVEAIRGDEEVRCVLLRSLVKDVFCAGADLKHRL 106
GI EL + P + N L+ V + A+ + E++ +LLRS K F GAD+ L
Sbjct: 16 GIAELVFDAPGSVNKLDTQTVANLGEALVVLEKQSELKGLLLRS-AKAAFIVGADITEFL 74
Query: 107 TL-NE--DQIRSFVSTLRYMTCQLESIPVPVLAVLDGSAYGGGLEMALACDIRVAASNVR 163
+L NE +++ ++ + +LE +PVP +A ++G A GGG E LA D RVA+ R
Sbjct: 75 SLFNEPPEKLHQWLVFANDIFNRLEDLPVPTIAAINGYALGGGCECILATDFRVASPEAR 134
Query: 164 MGLVETKLAIIPGAGGTQRLPRIVG----IPLAALYEDLLNNDCMS 205
+GL ETKL I+PG GG+ RLPR++G + + A +D++ D +
Sbjct: 135 IGLPETKLGIMPGFGGSVRLPRLLGADSALEIIAAGKDIIAKDALK 180
>sp|B8E3R3|FADB_SHEB2 Fatty acid oxidation complex subunit alpha OS=Shewanella baltica
(strain OS223) GN=fadB PE=3 SV=1
Length = 716
Score = 99.0 bits (245), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 82/144 (56%), Gaps = 4/144 (2%)
Query: 48 IVELCMNRPQARNALNATLVEEILTAVEAIRGDEEVRCVLLRSLVKDVFCAGADLKHRLT 107
I +LC N P + N + + + A+++I+ D ++ ++L S KD F GAD+ L
Sbjct: 17 IAKLCFNAPGSVNKFDRETLASLDAALDSIKQDSNIKALVLTS-SKDTFIVGADITEFLG 75
Query: 108 L---NEDQIRSFVSTLRYMTCQLESIPVPVLAVLDGSAYGGGLEMALACDIRVAASNVRM 164
L ++ + S+V + +LE +P P + + G A GGG E L D R+A + ++
Sbjct: 76 LFAQDDAVLLSWVEQANAVFNKLEDLPFPTASAIKGFALGGGCETILTTDFRIADTTAKI 135
Query: 165 GLVETKLAIIPGAGGTQRLPRIVG 188
GL ETKL IIPG GGT RLPR++G
Sbjct: 136 GLPETKLGIIPGFGGTVRLPRVIG 159
>sp|A7ZU51|FADB_ECO24 Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O139:H28 (strain E24377A / ETEC) GN=fadB PE=3 SV=1
Length = 729
Score = 98.6 bits (244), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 86/145 (59%), Gaps = 4/145 (2%)
Query: 47 GIVELCMNRPQARNALNATLVEEILTAVEAIRGDEEVRCVLLRSLVKDVFCAGADLKHRL 106
GI EL + P + N L+ V + A+ + +++ +LLRS K F GAD+ L
Sbjct: 16 GIAELVFDAPGSVNKLDTATVASLGEAIGVLEQQSDLKGLLLRS-NKAAFIVGADITEFL 74
Query: 107 TL---NEDQIRSFVSTLRYMTCQLESIPVPVLAVLDGSAYGGGLEMALACDIRVAASNVR 163
+L E+Q+ ++ + +LE +PVP +A ++G A GGG E LA D R+A ++R
Sbjct: 75 SLFLVPEEQLSQWLQFANSVFNRLEDLPVPTIAAVNGYALGGGCECVLATDYRLATPDLR 134
Query: 164 MGLVETKLAIIPGAGGTQRLPRIVG 188
+GL ETKL I+PG GG+ R+PR++G
Sbjct: 135 IGLPETKLGIMPGFGGSVRMPRMLG 159
>sp|A7MQP0|FADB_CROS8 Fatty acid oxidation complex subunit alpha OS=Cronobacter sakazakii
(strain ATCC BAA-894) GN=fadB PE=3 SV=1
Length = 729
Score = 98.6 bits (244), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 85/145 (58%), Gaps = 4/145 (2%)
Query: 47 GIVELCMNRPQARNALNATLVEEILTAVEAIRGDEEVRCVLLRSLVKDVFCAGADLKHRL 106
GI EL + P + N L+ V + A++ + +++ +LLRS K F GAD+ L
Sbjct: 16 GIAELVFDAPGSVNKLDTATVASLGHALDVLEKQHDLKALLLRS-EKAAFIVGADITEFL 74
Query: 107 TLNE---DQIRSFVSTLRYMTCQLESIPVPVLAVLDGSAYGGGLEMALACDIRVAASNVR 163
+L + +Q+ ++ + +LE +PVP L ++G A GGG E LA D R+A + R
Sbjct: 75 SLFQVPAEQLSQWLHFANSVFNRLEDLPVPTLCAINGYALGGGCECVLATDFRLATPDAR 134
Query: 164 MGLVETKLAIIPGAGGTQRLPRIVG 188
+GL ETKL I+PG GG+ RLPR++G
Sbjct: 135 IGLPETKLGIMPGFGGSVRLPRLLG 159
>sp|A1RDW6|FADB_SHESW Fatty acid oxidation complex subunit alpha OS=Shewanella sp.
(strain W3-18-1) GN=fadB PE=3 SV=1
Length = 716
Score = 98.6 bits (244), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 83/144 (57%), Gaps = 4/144 (2%)
Query: 48 IVELCMNRPQARNALNATLVEEILTAVEAIRGDEEVRCVLLRSLVKDVFCAGADLKHRLT 107
I +LC N P + N + + + A+++I+ + ++ ++L S KD F GAD+ L
Sbjct: 17 IAKLCFNAPGSVNKFDRETLASLDAALDSIKQNSNIKALVLTS-SKDTFIVGADITEFLG 75
Query: 108 L---NEDQIRSFVSTLRYMTCQLESIPVPVLAVLDGSAYGGGLEMALACDIRVAASNVRM 164
L ++ + S+V + +LE +P P + + G A GGG E LA D R+A + ++
Sbjct: 76 LFAQDDAVLLSWVEQANAVFNKLEDLPFPTASAIKGFALGGGCETILATDFRIADTTAKI 135
Query: 165 GLVETKLAIIPGAGGTQRLPRIVG 188
GL ETKL IIPG GGT RLPR++G
Sbjct: 136 GLPETKLGIIPGFGGTVRLPRVIG 159
>sp|A4Y1B6|FADB_SHEPC Fatty acid oxidation complex subunit alpha OS=Shewanella
putrefaciens (strain CN-32 / ATCC BAA-453) GN=fadB PE=3
SV=1
Length = 716
Score = 98.6 bits (244), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 83/144 (57%), Gaps = 4/144 (2%)
Query: 48 IVELCMNRPQARNALNATLVEEILTAVEAIRGDEEVRCVLLRSLVKDVFCAGADLKHRLT 107
I +LC N P + N + + + A+++I+ + ++ ++L S KD F GAD+ L
Sbjct: 17 IAKLCFNAPGSVNKFDRETLASLDAALDSIKQNSNIKALVLTS-SKDTFIVGADITEFLG 75
Query: 108 L---NEDQIRSFVSTLRYMTCQLESIPVPVLAVLDGSAYGGGLEMALACDIRVAASNVRM 164
L ++ + S+V + +LE +P P + + G A GGG E LA D R+A + ++
Sbjct: 76 LFAQDDAVLLSWVEQANAVFNKLEDLPFPTASAIKGFALGGGCETILATDFRIADTTAKI 135
Query: 165 GLVETKLAIIPGAGGTQRLPRIVG 188
GL ETKL IIPG GGT RLPR++G
Sbjct: 136 GLPETKLGIIPGFGGTVRLPRVIG 159
>sp|Q1R466|FADB_ECOUT Fatty acid oxidation complex subunit alpha OS=Escherichia coli
(strain UTI89 / UPEC) GN=fadB PE=3 SV=2
Length = 729
Score = 98.6 bits (244), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 86/145 (59%), Gaps = 4/145 (2%)
Query: 47 GIVELCMNRPQARNALNATLVEEILTAVEAIRGDEEVRCVLLRSLVKDVFCAGADLKHRL 106
GI EL + P + N L+ V + A+ + +++ +LLRS K F GAD+ L
Sbjct: 16 GIAELVFDTPGSVNKLDTATVASLGEAIGVLEQQSDLKGLLLRS-NKAAFIVGADITEFL 74
Query: 107 TL---NEDQIRSFVSTLRYMTCQLESIPVPVLAVLDGSAYGGGLEMALACDIRVAASNVR 163
+L E+Q+ ++ + +LE +PVP +A ++G A GGG E LA D R+A ++R
Sbjct: 75 SLFLVPEEQLSQWLHFANSVFNRLEDLPVPTIAAVNGYALGGGCECVLATDYRLATPDLR 134
Query: 164 MGLVETKLAIIPGAGGTQRLPRIVG 188
+GL ETKL I+PG GG+ R+PR++G
Sbjct: 135 IGLPETKLGIMPGFGGSVRMPRMLG 159
>sp|B7MHD1|FADB_ECO45 Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O45:K1 (strain S88 / ExPEC) GN=fadB PE=3 SV=1
Length = 729
Score = 98.6 bits (244), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 86/145 (59%), Gaps = 4/145 (2%)
Query: 47 GIVELCMNRPQARNALNATLVEEILTAVEAIRGDEEVRCVLLRSLVKDVFCAGADLKHRL 106
GI EL + P + N L+ V + A+ + +++ +LLRS K F GAD+ L
Sbjct: 16 GIAELVFDTPGSVNKLDTATVASLGEAIGVLEQQSDLKGLLLRS-NKAAFIVGADITEFL 74
Query: 107 TL---NEDQIRSFVSTLRYMTCQLESIPVPVLAVLDGSAYGGGLEMALACDIRVAASNVR 163
+L E+Q+ ++ + +LE +PVP +A ++G A GGG E LA D R+A ++R
Sbjct: 75 SLFLVPEEQLSQWLHFANSVFNRLEDLPVPTIAAVNGYALGGGCECVLATDYRLATPDLR 134
Query: 164 MGLVETKLAIIPGAGGTQRLPRIVG 188
+GL ETKL I+PG GG+ R+PR++G
Sbjct: 135 IGLPETKLGIMPGFGGSVRMPRMLG 159
>sp|Q8FBI2|FADB_ECOL6 Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=fadB PE=3
SV=2
Length = 729
Score = 98.6 bits (244), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 86/145 (59%), Gaps = 4/145 (2%)
Query: 47 GIVELCMNRPQARNALNATLVEEILTAVEAIRGDEEVRCVLLRSLVKDVFCAGADLKHRL 106
GI EL + P + N L+ V + A+ + +++ +LLRS K F GAD+ L
Sbjct: 16 GIAELVFDAPGSVNKLDTATVASLGEAIGVLEQQSDLKGLLLRS-NKAAFIVGADITEFL 74
Query: 107 TL---NEDQIRSFVSTLRYMTCQLESIPVPVLAVLDGSAYGGGLEMALACDIRVAASNVR 163
+L E+Q+ ++ + +LE +PVP +A ++G A GGG E LA D R+A ++R
Sbjct: 75 SLFLVPEEQLSQWLHFANSVFNRLEDLPVPTIAAVNGYALGGGCECVLATDYRLATPDLR 134
Query: 164 MGLVETKLAIIPGAGGTQRLPRIVG 188
+GL ETKL I+PG GG+ R+PR++G
Sbjct: 135 IGLPETKLGIMPGFGGSVRMPRMLG 159
>sp|B5YY93|FADB_ECO5E Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O157:H7 (strain EC4115 / EHEC) GN=fadB PE=3 SV=1
Length = 729
Score = 98.6 bits (244), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 86/145 (59%), Gaps = 4/145 (2%)
Query: 47 GIVELCMNRPQARNALNATLVEEILTAVEAIRGDEEVRCVLLRSLVKDVFCAGADLKHRL 106
GI EL + P + N L+ V + A+ + +++ +LLRS K F GAD+ L
Sbjct: 16 GIAELVFDAPGSVNKLDTATVASLGEAIGVLEQQSDLKGLLLRS-NKAAFIVGADITEFL 74
Query: 107 TL---NEDQIRSFVSTLRYMTCQLESIPVPVLAVLDGSAYGGGLEMALACDIRVAASNVR 163
+L E+Q+ ++ + +LE +PVP +A ++G A GGG E LA D R+A ++R
Sbjct: 75 SLFLVPEEQLSQWLHFANSVFNRLEDLPVPTIAAVNGYALGGGCECVLATDYRLATPDLR 134
Query: 164 MGLVETKLAIIPGAGGTQRLPRIVG 188
+GL ETKL I+PG GG+ R+PR++G
Sbjct: 135 IGLPETKLGIMPGFGGSVRMPRMLG 159
>sp|Q8X8I2|FADB_ECO57 Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O157:H7 GN=fadB PE=3 SV=1
Length = 729
Score = 98.6 bits (244), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 86/145 (59%), Gaps = 4/145 (2%)
Query: 47 GIVELCMNRPQARNALNATLVEEILTAVEAIRGDEEVRCVLLRSLVKDVFCAGADLKHRL 106
GI EL + P + N L+ V + A+ + +++ +LLRS K F GAD+ L
Sbjct: 16 GIAELVFDAPGSVNKLDTATVASLGEAIGVLEQQSDLKGLLLRS-NKAAFIVGADITEFL 74
Query: 107 TL---NEDQIRSFVSTLRYMTCQLESIPVPVLAVLDGSAYGGGLEMALACDIRVAASNVR 163
+L E+Q+ ++ + +LE +PVP +A ++G A GGG E LA D R+A ++R
Sbjct: 75 SLFLVPEEQLSQWLHFANSVFNRLEDLPVPTIAAVNGYALGGGCECVLATDYRLATPDLR 134
Query: 164 MGLVETKLAIIPGAGGTQRLPRIVG 188
+GL ETKL I+PG GG+ R+PR++G
Sbjct: 135 IGLPETKLGIMPGFGGSVRMPRMLG 159
>sp|Q0TAL0|FADB_ECOL5 Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O6:K15:H31 (strain 536 / UPEC) GN=fadB PE=3 SV=1
Length = 729
Score = 98.2 bits (243), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 86/145 (59%), Gaps = 4/145 (2%)
Query: 47 GIVELCMNRPQARNALNATLVEEILTAVEAIRGDEEVRCVLLRSLVKDVFCAGADLKHRL 106
GI EL + P + N L+ V + A+ + +++ +LLRS K F GAD+ L
Sbjct: 16 GIAELVFDAPGSVNKLDTATVASLGEAIGVLEQQSDLKGLLLRS-NKAAFIVGADITEFL 74
Query: 107 TL---NEDQIRSFVSTLRYMTCQLESIPVPVLAVLDGSAYGGGLEMALACDIRVAASNVR 163
+L E+Q+ ++ + +LE +PVP +A ++G A GGG E LA D R+A ++R
Sbjct: 75 SLFLVPEEQLSQWLHFANSVFNRLEDLPVPTIAAVNGYALGGGCECVLATDYRLATPDLR 134
Query: 164 MGLVETKLAIIPGAGGTQRLPRIVG 188
+GL ETKL I+PG GG+ R+PR++G
Sbjct: 135 IGLPETKLGIMPGFGGSVRMPRMLG 159
>sp|B7UNH4|FADB_ECO27 Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O127:H6 (strain E2348/69 / EPEC) GN=fadB PE=3 SV=1
Length = 729
Score = 98.2 bits (243), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 86/145 (59%), Gaps = 4/145 (2%)
Query: 47 GIVELCMNRPQARNALNATLVEEILTAVEAIRGDEEVRCVLLRSLVKDVFCAGADLKHRL 106
GI EL + P + N L+ V + A+ + +++ +LLRS K F GAD+ L
Sbjct: 16 GIAELVFDAPGSVNKLDTATVASLGEAIGVLEQQSDLKGLLLRS-NKAAFIVGADITEFL 74
Query: 107 TL---NEDQIRSFVSTLRYMTCQLESIPVPVLAVLDGSAYGGGLEMALACDIRVAASNVR 163
+L E+Q+ ++ + +LE +PVP +A ++G A GGG E LA D R+A ++R
Sbjct: 75 SLFLVPEEQLSQWLHFANSVFNRLEDLPVPTIAAVNGYALGGGCECVLATDYRLATPDLR 134
Query: 164 MGLVETKLAIIPGAGGTQRLPRIVG 188
+GL ETKL I+PG GG+ R+PR++G
Sbjct: 135 IGLPETKLGIMPGFGGSVRMPRMLG 159
>sp|B1LM32|FADB_ECOSM Fatty acid oxidation complex subunit alpha OS=Escherichia coli
(strain SMS-3-5 / SECEC) GN=fadB PE=3 SV=1
Length = 729
Score = 98.2 bits (243), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 86/145 (59%), Gaps = 4/145 (2%)
Query: 47 GIVELCMNRPQARNALNATLVEEILTAVEAIRGDEEVRCVLLRSLVKDVFCAGADLKHRL 106
GI EL + P + N L+ V + A+ + +++ +LLRS K F GAD+ L
Sbjct: 16 GIAELVFDAPGSVNKLDTATVASLGEAIGVLEQQSDLKGLLLRS-NKAAFIVGADITEFL 74
Query: 107 TL---NEDQIRSFVSTLRYMTCQLESIPVPVLAVLDGSAYGGGLEMALACDIRVAASNVR 163
+L E+Q+ ++ + +LE +PVP +A ++G A GGG E LA D R+A ++R
Sbjct: 75 SLFLVPEEQLSQWLHFANSVFNRLEDLPVPTIAAVNGYALGGGCECVLATDYRLATPDLR 134
Query: 164 MGLVETKLAIIPGAGGTQRLPRIVG 188
+GL ETKL I+PG GG+ R+PR++G
Sbjct: 135 IGLPETKLGIMPGFGGSVRMPRMLG 159
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.139 0.425
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 131,142,848
Number of Sequences: 539616
Number of extensions: 5430406
Number of successful extensions: 12229
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 360
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 11564
Number of HSP's gapped (non-prelim): 455
length of query: 358
length of database: 191,569,459
effective HSP length: 119
effective length of query: 239
effective length of database: 127,355,155
effective search space: 30437882045
effective search space used: 30437882045
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 62 (28.5 bits)