BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5045
(407 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q05B18|SHQ1_XENTR Protein SHQ1 homolog OS=Xenopus tropicalis GN=shq1 PE=2 SV=1
Length = 604
Score = 206 bits (525), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 145/446 (32%), Positives = 223/446 (50%), Gaps = 64/446 (14%)
Query: 1 MLTPMFELLQSEEDVTIIIKAPYANIADTEVYVEDTDFRFSSSPYYLRLNFPGPIKETDH 60
M+TP F++ Q + +TIIIK PYA ++ ++Y+E DF+F + PY+LRL PG I E
Sbjct: 1 MITPAFDISQDSDFLTIIIKVPYARASEIDIYIEGDDFKFYAKPYFLRLALPGRIVEDGR 60
Query: 61 TSGKYDSDKGQFTFTVIKVNTGEHFPDLDLISKLLIPPVKHRVAKPGIEVMSEPNNVSDE 120
Y++D G T +V K G+HF LDL++ LL P + AKP +E + +NV +E
Sbjct: 61 QKATYNADDGIITVSVPKETPGQHFEGLDLLTSLLAP-RGSKSAKPLVEEIGSSDNVVEE 119
Query: 121 DEDEDDDTMWFIEQEPQHQPEENS--TTYGYGFANKTKGTLTNMKVTISKSDLGFDLEEL 178
+EDE D W IEQ P +P E + + YGF N G ++ ++ D+ +L
Sbjct: 120 EEDEFD---WQIEQTPFVEPTEEALQSQCTYGFGNLRSGVFRRLQEELN------DVIDL 170
Query: 179 ETAARIVEEEEVERALCNHVSTL----VLCSNSEQSERSIIFFIGLDFWVVSRDYA--SD 232
E R L + L E E + + W V+ +A S
Sbjct: 171 RDPDVTPASERTRRRLAAEKAKFDPDHYLADLFE--EEPVQHLLKYQPWWVAEIHAGCSL 228
Query: 233 VRQAQDDRTQMTPSELDTMKQLGNREYLLSSEEKCAVLLSLVNILYAYCYDVRTTMGEHT 292
++Q+ R + + + +++ N+ +LL + + L L+++L AYCY+VR T G+
Sbjct: 229 SAESQERRVSFSDKQKEQLRKFTNKSHLLDKKTQQQAYLGLIDLLLAYCYEVRVTEGDQN 288
Query: 293 VESGWTVNKLSSALCWLQSFTSLKQVLISSMRRSLCYPLYREWR---------------- 336
VES W + KLSS L W ++FT +K +L+S RR LCYPLYR ++
Sbjct: 289 VESAWNIRKLSSTLSWFENFTCVKDILVSFGRRVLCYPLYRNFQLVEKAIADTVSLLKLG 348
Query: 337 ----LSCAI-------QQDVNTILS-----------QDILGYKV------MKQVTISKSD 368
L C + + D IL+ Q + KV ++ ++ISKSD
Sbjct: 349 KAAVLKCLLEIHAIFQENDPAYILNDLYITDYCIWIQKVKSKKVASLSDCVQSLSISKSD 408
Query: 369 LGFDLDELETAARIVEEEEVERALCN 394
LGF+L ELE AAR+V+EEE + L +
Sbjct: 409 LGFELGELEEAARLVQEEETQGQLAS 434
>sp|Q7TMX5|SHQ1_MOUSE Protein SHQ1 homolog OS=Mus musculus GN=Shq1 PE=2 SV=2
Length = 569
Score = 193 bits (490), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 146/467 (31%), Positives = 224/467 (47%), Gaps = 96/467 (20%)
Query: 1 MLTPMFELLQSEEDVTIIIKAPYANIADTEVYVEDTDFRFSSSPYYLRLNFPGPIKETDH 60
MLTP FEL Q + +T+ I+ P+A ++ +VY E DF+F + PY+LRL PG I E
Sbjct: 1 MLTPAFELTQDCDFLTVAIRVPHARASEFDVYFEGVDFKFYAKPYFLRLTLPGRIVENGS 60
Query: 61 TSGKYDSDKGQFTFTVIKVNTGEHFPDLDLISKLLIPPVKHRVAKPGIEVMSEPNNVSDE 120
G YD+DKG FT + K G+HF L++++ LL P K R AKP +E + +
Sbjct: 61 EQGTYDADKGIFTIRLPKETPGQHFEGLNMLTALLA-PRKSRSAKPLVEEIGASGVAEEG 119
Query: 121 DEDEDDDTMWFIEQEPQHQPEENS--TTYGYGFANKTKGTLTNMKVTIS----------- 167
+DED++ W IEQ P + E++ + YGF N G + ++ +S
Sbjct: 120 ADDEDEEFDWEIEQTPYEEVSESTLQSQCHYGFGNLRAGVVQRLQDELSEVIDIKDPDFT 179
Query: 168 ------KSDLGFDLEELET---AARIVEEEEVERAL-----CNHVSTLVLCSNSEQSERS 213
+ L +L + + A E+E VE+ L N ++ S + E+
Sbjct: 180 PVTERRQKRLAAELAKFDPDHYLADFFEDEAVEQILKYSPWWNDAHAEMVASLGKNQEQG 239
Query: 214 IIFFIGLDFWVVSRDYASDVRQAQDDRTQMTPSELDTMKQLGNREYLLSSEEKCAVLLSL 273
D A+ V +++++ Q +++ N+ YLL V L
Sbjct: 240 --------------DSAALVSFSEEEKYQ--------LRKFVNKSYLLDKTAHRQVYYGL 277
Query: 274 VNILYAYCYDVRTTMGEHTVESGWTVNKLSSALCWLQSFTSLKQVLISSMRRSLCYPLYR 333
V+IL AYCY+VR T GEH+VES WT+ KLS LCW +++T + ++L+S RR LCYPLYR
Sbjct: 278 VDILLAYCYEVRVTEGEHSVESAWTIRKLSPTLCWFETWTDVHEILVSFGRRVLCYPLYR 337
Query: 334 EWRL-------SCAIQQ-----------DVNTILSQDILGY------------------- 356
++L + I Q DV+ + ++ Y
Sbjct: 338 HFKLVLKAYRDTIKILQLGKSAVLKCLLDVHKVFQENDPAYILNDLYISDYCVWIQKAKS 397
Query: 357 -------KVMKQVTISKSDLGFDLDELETAARIVEEEE--VERALCN 394
+ +K V++SK+ LG +L ELE AA +V+EEE A CN
Sbjct: 398 KKLAALTEALKAVSLSKAQLGLELPELEAAALLVQEEEGAGRAAQCN 444
>sp|A1L1R0|SHQ1_DANRE Protein SHQ1 homolog OS=Danio rerio GN=shq1 PE=1 SV=1
Length = 585
Score = 190 bits (483), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 121/371 (32%), Positives = 189/371 (50%), Gaps = 19/371 (5%)
Query: 1 MLTPMFELLQSEEDVTIIIKAPYANIADTEVYVEDTDFRFSSSPYYLRLNFPGPIKETDH 60
M+TP FEL Q + + ++I+ PY +D ++Y+++ +F+F + PY+LRL PG I E
Sbjct: 1 MITPAFELSQDADFLIVVIRVPYTRTSDFDIYIQEEEFKFYAKPYFLRLTLPGRIVEDGR 60
Query: 61 TSGKYDSDKGQFTFTVIKVNTGEHFPDLDLISKLLIPPVKHRVAKPGIEVMSEPNNVSDE 120
+D DKG FT V K G+HF L++++ LL P R AKP +E +E
Sbjct: 61 EKASFDIDKGLFTLHVPKETAGQHFEGLEMLTSLLAPK-GSRSAKPLVEDSEACGEGCEE 119
Query: 121 DEDEDDDTMWFIEQEPQHQPEENSTT--YGYGFANKTKGTLTNMKVTISKSDLGFDLEEL 178
+++E D W IEQE + ++ + YGF N G + ++ +++ D +
Sbjct: 120 EDEEFD---WQIEQEVYTEAPADTLKEYHKYGFGNLRSGVFSRLQEELNEVIDMKDPDNT 176
Query: 179 ETAARIVEEEEVERALCNHVSTLVLCSNSEQSERSIIFFIGLDFWVVSRDYASDVRQAQD 238
R + E A+ LV ++ R+++ F +W R D D
Sbjct: 177 NAELRRRNRLDTETAVFCADHYLVNLYEDKEEIRNLLKFK--PWW---RKLNPDPSAGYD 231
Query: 239 DRTQMTPSELDTMKQLGNREYLLSSEEKCAVLLSLVNILYAYCYDVRTTMGEHTVESGWT 298
T E + M++ NR YLL + + V L LV+I+ AY YDVRTT GEH VES WT
Sbjct: 232 ISMTFTEEEREQMRRFTNRSYLLDKKARFHVWLGLVDIILAYVYDVRTTEGEHNVESAWT 291
Query: 299 VNKLSSALCWLQSFTSLKQVLISSMRRSLCYPLYREWRL--------SCAIQQDVNTILS 350
+ KLS L WL+++ S++ VL+S RR+ CYPLYR + L +C Q IL
Sbjct: 292 IRKLSGTLSWLETYHSVQDVLVSFGRRTYCYPLYRHFSLVTLAVKDAACIFQAGKACILK 351
Query: 351 QDILGYKVMKQ 361
+ +K+ ++
Sbjct: 352 CLLAIHKIFRE 362
>sp|Q6PI26|SHQ1_HUMAN Protein SHQ1 homolog OS=Homo sapiens GN=SHQ1 PE=1 SV=2
Length = 577
Score = 189 bits (480), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 121/374 (32%), Positives = 190/374 (50%), Gaps = 48/374 (12%)
Query: 1 MLTPMFELLQSEEDVTIIIKAPYANIADTEVYVEDTDFRFSSSPYYLRLNFPGPIKETDH 60
MLTP F+L Q + +TI I+ PYA +++ +VY E +DF+F + PY+LRL PG I E
Sbjct: 1 MLTPAFDLSQDPDFLTIAIRVPYARVSEFDVYFEGSDFKFYAKPYFLRLTLPGRIVENGS 60
Query: 61 TSGKYDSDKGQFTFTVIKVNTGEHFPDLDLISKLLIPPVKHRVAKPGIEVMSE---PNNV 117
G YD+DKG FT + K G+HF L++++ LL P K R AKP +E + P V
Sbjct: 61 EQGSYDADKGIFTIRLPKETPGQHFEGLNMLTALLA-PRKSRTAKPLVEEIGASEIPEEV 119
Query: 118 SDEDEDEDDDTMWFIEQEPQHQPEENSTT--YGYGFANKTKGTLTNMKVTIS-------- 167
D++E + W IEQ P + E++ YGF N G L ++ +S
Sbjct: 120 VDDEEFD-----WEIEQTPCEEVSESALNPQCHYGFGNLRSGVLQRLQDELSDVIDIKDP 174
Query: 168 ---------KSDLGFDLEELET---AARIVEEEEVERALCNHVSTLVLCSNSEQSERSII 215
+ L +L + + A E+E +E+ +L N +++
Sbjct: 175 DFTPAAERRQKRLAAELAKFDPDHYLADFFEDEAIEQ---------ILKYNPWWTDKYSK 225
Query: 216 FFIGLDFWVVSRDYASDVRQAQDDRTQMTPSELDTMKQLGNREYLLSSEEKCAVLLSLVN 275
L+ ++A+ V +++++ Q +++ N+ YLL V SL++
Sbjct: 226 MMAFLEKSQEQENHATLVSFSEEEKYQ--------LRKFVNKSYLLDKRACRQVCYSLID 277
Query: 276 ILYAYCYDVRTTMGEHTVESGWTVNKLSSALCWLQSFTSLKQVLISSMRRSLCYPLYREW 335
IL AYCY+ R T GE VES W + KLS LCW +++T++ +++S RR LCYPLYR +
Sbjct: 278 ILLAYCYETRVTEGEKNVESAWNIRKLSPTLCWFETWTNVHDIMVSFGRRVLCYPLYRHF 337
Query: 336 RLSCAIQQDVNTIL 349
+L +D IL
Sbjct: 338 KLVMKAYRDTIKIL 351
>sp|Q3MHH1|SHQ1_BOVIN Protein SHQ1 homolog OS=Bos taurus GN=SHQ1 PE=2 SV=1
Length = 579
Score = 177 bits (450), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 121/377 (32%), Positives = 190/377 (50%), Gaps = 52/377 (13%)
Query: 1 MLTPMFELLQSEEDVTIIIKAPYANIADTEVYVEDTDFRFSSSPYYLRLNFPGPIKETDH 60
MLTP F+L Q + +T+ I+ PYA +++ +VY E DF+F + PY+LRL PG I E +
Sbjct: 1 MLTPAFDLSQDPDFLTVAIRVPYARVSEFDVYFEGVDFKFYAKPYFLRLTLPGRIVENGN 60
Query: 61 TSGKYDSDKGQFTFTVIKVNTGEHFPDLDLISKLLIPPVKHRVAKPGIEVMSEPNNVSDE 120
G YD+DKG FT + K G+HF L++++ LL P K R AKP +E +
Sbjct: 61 EQGSYDADKGIFTIRLPKETPGQHFEGLNMLTALLA-PRKSRTAKPLVEEIGASEVSEGG 119
Query: 121 DEDEDDDTMWFIEQEPQHQPEENSTTYG--YGFANKTKGTLTNMKVTIS----------- 167
ED+DD+ W IEQ P + E++ YGF N G ++ +S
Sbjct: 120 VEDDDDEFDWEIEQSPYEEVPESALNPNCRYGFGNLRSGVFQRLQDELSDVIDIKDPDFT 179
Query: 168 ------KSDLGFDLEELET---AARIVEEEEVERAL------CNHVSTLVLCSNSEQSER 212
+ L +L + + A +E+E V++ L + S ++ Q E
Sbjct: 180 SAAERRQKRLAAELAKFDPDHYLADFMEDEAVKQVLEYNPWWSDLYSEMMTSLGKSQEEE 239
Query: 213 SIIFFIGLDFWVVSRDYASDVRQAQDDRTQMTPSELDTMKQLGNREYLLSSEEKCAVLLS 272
++ A+ V +++++ Q +++ N+ YLL + V S
Sbjct: 240 NL---------------AALVSFSEEEKYQ--------LRKFVNKSYLLDKKAHRQVYYS 276
Query: 273 LVNILYAYCYDVRTTMGEHTVESGWTVNKLSSALCWLQSFTSLKQVLISSMRRSLCYPLY 332
L++IL AYCY+ R T GE VES W + KLS LCW +++T++ ++L+S RR LCYPLY
Sbjct: 277 LIDILLAYCYETRVTEGERNVESAWNIRKLSPTLCWFETWTNVHEILVSFGRRVLCYPLY 336
Query: 333 REWRLSCAIQQDVNTIL 349
R ++L +D IL
Sbjct: 337 RHFKLVMKTYRDTIKIL 353
>sp|Q9TYM6|SHQ1_CAEEL Protein SHQ1 homolog OS=Caenorhabditis elegans GN=Y48A5A.1 PE=3
SV=4
Length = 431
Score = 149 bits (375), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 106/359 (29%), Positives = 180/359 (50%), Gaps = 31/359 (8%)
Query: 1 MLTPMFELLQSEEDVTIIIKAPYANIADTEVYVEDTDFRFSSSPYYLRLNFPGPIKETDH 60
MLTP+F + Q ++ + I I+AP+ NIA+ + D F F+ PY+LRL+F ++E
Sbjct: 1 MLTPVFWITQDDDALLIRIRAPHGNIAELDYDHGDYMFVFTCPPYFLRLHFKQMVEEYGS 60
Query: 61 TSG--KYDSDKGQFTFTVIKVNTGEHFPDLDLISKLLIPPVKHRVAKPGIEVMSEPNNVS 118
+G ++ SD+G+F V K++ EHF +LD+I++LL P H V ++
Sbjct: 61 GNGSVEWKSDEGEFHIKVPKMHKKEHFSNLDMITELLTPSTTHHQPHGNQLVEEMDDSED 120
Query: 119 DEDEDEDDDTMWFIEQEPQHQPEENST-----TYGYGFANKTKGTLTNMKVTISKSDLGF 173
D++ D + + +EQ+P +PEE + +GYGF G + ++ I K
Sbjct: 121 DDEGDG---SEFLVEQQPAAEPEEPKSDGKIEKFGYGFGWSKFGVIERLRDEIGKIVDIL 177
Query: 174 DLEELETAARIVEEEEVERALCNHVSTLVLCSNSEQSERSIIFFIGLDFWVVSRDYASDV 233
+ E +E R ++ +E N L E E + V+S +A +
Sbjct: 178 EPENVEIEKR--ADKLMEFDWENFDEGRYLADTLEPEEELLA--------VISSKFAQKL 227
Query: 234 RQAQDDRTQMT--PSELDTMKQLGNREYLLSSEEKCAVLLSLVNILYAYCYDVRTTMGEH 291
+ +DRT++ + K GN ++ SL++I++ YCYD R E
Sbjct: 228 EISDEDRTKLKDLKKSKTSAKINGN---------DVEIMTSLIDIVFGYCYDQRVNDWES 278
Query: 292 TVESGWTVNKLSSALCWLQSFTSLKQVLISSMRRSLCYPLYREWRLSCAIQQDVNTILS 350
ESGW KLS +L + F+S+K+ L++ RR+L YPLYR ++L+ + QDV +++
Sbjct: 279 ACESGWNCAKLSPSLSFFAKFSSVKECLLACTRRALTYPLYRSFQLTQRVIQDVCHVIT 337
>sp|O43076|SHQ1_SCHPO Protein shq1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=shq1 PE=3 SV=1
Length = 451
Score = 139 bits (351), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 117/391 (29%), Positives = 188/391 (48%), Gaps = 36/391 (9%)
Query: 1 MLTPMFELLQSEEDVTIIIKAPYANIADTEVYVEDTDFRFSSSPYYLRLNFPGPIKETDH 60
M+TP FEL Q EE V + + PY + E+ + + F +PY+L+L PG + + D
Sbjct: 1 MITPKFELRQDEEFVYLDVHTPYIKAKNVEIDAFNNEVNFCIAPYFLKLELPGNVLDDDR 60
Query: 61 TSGKYDSDKGQFTFTVIKVNTGEHFPDLDLISKLLIPPVKHRVAKPGIEVM------SEP 114
+ YD G K GE FPDLDL++ LL+ K V KP IE + S
Sbjct: 61 ANASYDISSGFVHIKFPKETPGEVFPDLDLLTTLLVNQNKEPVKKPLIEEVEDTPSPSTS 120
Query: 115 NNVSDEDEDE-----------DDDTMWFIEQEPQHQPEENSTTYGYGFANKTKGTLTNMK 163
N S ++E E D D W + Q + + ++T YGF N+ G L
Sbjct: 121 QNASKDEEKEVKIDWQNIHFDDPDFDWGLLQRLDDEKMQYTSTSQYGFNNQYSGLLKYNA 180
Query: 164 VTISKSDLGFDLEELETAARIVEEEEVERALCNHVSTLVLCSNSEQSERSIIFFIGLDFW 223
+ ++ + + E + R ++E + + + E + I+ +I
Sbjct: 181 LVGNEINQIPEPERTPPSTRSEIRVQLEDEKFDAEHYMADFYDREMIDE-ILHYIP---- 235
Query: 224 VVSRDYASD---VRQAQDDRT-QMTPSELDTMKQLGNREYLLSSEEKCAVLLSLVNILYA 279
DY + V+Q + DR + T E + + +L R YL+ + + V L LV +++A
Sbjct: 236 ----DYIGEFLLVQQGKSDRLLEFTSEEKEALAKLPKRSYLIDNPKN--VYLCLVPLIFA 289
Query: 280 YCYDVRTTMGEHTVESGWTVNKLSSAL-CWLQSFTSLKQVLISSMRRSLCYPLYREWRLS 338
Y YD RTT+G+ T+ES W + LSS + C +F ++K + I+ +RRSL YPLYR W L+
Sbjct: 290 YAYDNRTTLGDPTIESCWNIGTLSSTISCLDTNFLAIKDIFIACIRRSLAYPLYRNWDLA 349
Query: 339 CAIQQDVNTILSQDILGYKVMKQVTISKSDL 369
+D + ILS LG + + +V + +L
Sbjct: 350 LTCWKDTHAILS---LGKRWILRVLLRIRNL 377
>sp|P40486|SHQ1_YEAST Protein SHQ1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=SHQ1 PE=1 SV=1
Length = 507
Score = 82.8 bits (203), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 101/402 (25%), Positives = 171/402 (42%), Gaps = 76/402 (18%)
Query: 1 MLTPMFELLQSEEDVTIIIKAPYANI----ADTEVYVEDTDFRFSSSPYYLRLNFPGPIK 56
M+TP F + Q EE I +K +NI E+ +++ F SPYYLRL FP +
Sbjct: 1 MITPRFSITQDEE--FIFLKIFISNIRFSAVGLEIIIQENMIIFHLSPYYLRLRFPHELI 58
Query: 57 ETDHTSGKYDSDKGQFTFTVIKVNTGEHFPDLDLISKLLIPPV-------------KHRV 103
+ + ++ +YDS V K+N E+F DLDL +KLL +
Sbjct: 59 DDERSTAQYDSKDECINVKVAKLNKNEYFEDLDLPTKLLARQGDLAGADALTENTDAKKT 118
Query: 104 AKPGIEVMSEPNNVSDEDEDE-------DDDTMWFIEQEPQHQPEENSTTYGYGFANKTK 156
KP I+ + E + VS+ +D+ + W IEQ+ YGF N
Sbjct: 119 QKPLIQEV-ETDGVSNNIKDDVKTIGQMGEGFNWEIEQKMDSSTNNGILKTKYGFDN--- 174
Query: 157 GTLTNMKVTISKSDLGFDLEEL------ETAARIVEEEEVERALCN---HVSTLVLCSNS 207
L + +++S S+ G D+ EL + R++E E + +VS +
Sbjct: 175 --LYDTVISVSTSN-GNDINELDDPEHTDANDRVIERLRKENLKFDPEYYVSEYMTHKYG 231
Query: 208 EQSERSIIFFIGLDFWVVS--RDYASDVRQAQDDRTQM----TPSELDTMK-QLGNREYL 260
+ + I L + S + Y + + + M T E M+ L + YL
Sbjct: 232 NEEDLEINGIKELLKFTPSIVKQYLQWYKDSTNPNLVMPIEFTDEEQKQMQDNLPKKSYL 291
Query: 261 LSSEEKCAVLLSLVNILYAYCYDVRTTMGEHTVESGWTVNKLSSALCWLQSFTSLKQV-- 318
+ E+ + ++++++L++Y ++ G HT ES WT+ KL + +L LKQV
Sbjct: 292 V--EDIKPLYVTILSVLFSYVFEQIENEGTHTTESAWTMGKLCPQISFLDQ--QLKQVNE 347
Query: 319 ---------------------LISSMRRSLCYPLYREWRLSC 339
+I+ +RR+L YPL+R + L+
Sbjct: 348 LQDGMKEISKVNKDSSLIKIAIITGIRRALSYPLHRNYDLAM 389
>sp|Q9VI74|SHQ1_DROME Protein SHQ1 homolog OS=Drosophila melanogaster GN=CG10055 PE=2
SV=1
Length = 608
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 96/216 (44%), Gaps = 32/216 (14%)
Query: 144 STTYGYGFANKTKGTLTNMKVTISKSDLGFDLEELETAARIVEEEEVERALCNHVSTLVL 203
+ +GYG+A++ G L DL EL+ A V E + +V
Sbjct: 202 TNNFGYGYASEYSGPL--------------DLSELDRATCRVSEPHRMSPIQRRQERVVD 247
Query: 204 CSNSEQSERSIIFFIGLDFWVVSRDYASDVR-QAQDDRTQMTPSE---LDTMKQLGNREY 259
E+ I F+ L V + + +R + + T MT + L + ++ RE
Sbjct: 248 EMKRFSREQYKINFVELQ---VPSGHQNPLRYKPKIYETSMTQEQAHLLHNISRMQTRE- 303
Query: 260 LLSSEEKCAVL------LSLVNILYAYCYDVRTTMGEHTVESGWTVNKLSSALCWLQSFT 313
++ C V L++IL A CYDVRTT E T ESGWT + L C+ + F
Sbjct: 304 ----QQPCDVFRQNEIDCGLISILLAICYDVRTTNNEPTCESGWTRSILCPLYCYFEQFD 359
Query: 314 SLKQVLISSMRRSLCYPLYREWRLSCAIQQDVNTIL 349
+ + VL++ +RR + YPLYR + L +D +L
Sbjct: 360 NYRDVLVAFLRRMITYPLYRNFELGRQCVRDAIEVL 395
>sp|C7YY76|ATP25_NECH7 ATPase synthesis protein 25, mitochondrial OS=Nectria haematococca
(strain 77-13-4 / ATCC MYA-4622 / FGSC 9596 / MPVI)
GN=ATP25 PE=3 SV=1
Length = 627
Score = 35.0 bits (79), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 25/47 (53%), Gaps = 5/47 (10%)
Query: 96 IPPVKHRVAKPGIEVMSEPNNVSD-EDEDEDDDTMWFIEQEPQHQPE 141
I P RVA EV+ P+N + +D E DD WF+E EP PE
Sbjct: 57 IEPKGERVA----EVLVTPDNAPETKDTAESDDVPWFLEVEPPRHPE 99
>sp|A8G4K4|UREF_PROM2 Urease accessory protein UreF OS=Prochlorococcus marinus (strain
MIT 9215) GN=ureF PE=3 SV=1
Length = 228
Score = 35.0 bits (79), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 6/90 (6%)
Query: 217 FIGLDFWVVSRDYASDVRQAQDDRTQMTPSELDTMKQLGNREYLLSSEEKCAVLLSLVNI 276
+ LD W++S + ++R Q QM S D K+ G EYL +K + L+
Sbjct: 85 LLSLDKWILSSKDSVEMRAQQ---IQMANSLFDLNKEFG-FEYLYKKNKKNSWPLAWS-- 138
Query: 277 LYAYCYDVRTTMGEHTVESGWTVNKLSSAL 306
YC+++ T W+ N+LS+AL
Sbjct: 139 WSCYCFEITKLEMVETFLYAWSANQLSAAL 168
>sp|P36632|RAD26_SCHPO DNA repair protein rad26 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=rad26 PE=1 SV=2
Length = 614
Score = 34.3 bits (77), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/124 (21%), Positives = 53/124 (42%), Gaps = 22/124 (17%)
Query: 216 FFIGLDFWVVSRDYASDVRQAQDDRTQMT----PSELDTMKQLGNREYLLSSEEKCAVLL 271
F++ +DF + Y S R++ DD +T PS ++ ++ N L+ KC V L
Sbjct: 370 FYVLIDFLYL---YLSIARESADDFANITKAVDPSLFESCIRVQNAPSLI----KCGVCL 422
Query: 272 SLVNILYAYCYDVRTTMGEHTVESGWTVNKLSSALCWLQSFTSLKQVLISSMRRSLCYPL 331
+ + ++C V + + +Q FT++ +L+ + R + +P
Sbjct: 423 IISSTTPSFCASVNLLNADDKSQESL-----------MQLFTTMAHILVVTTRERINFPE 471
Query: 332 YREW 335
EW
Sbjct: 472 LNEW 475
>sp|B8DGJ3|Y2409_LISMH Putative ATP:guanido phosphotransferase LMHCC_2409 OS=Listeria
monocytogenes serotype 4a (strain HCC23) GN=LMHCC_2409
PE=3 SV=1
Length = 340
Score = 32.7 bits (73), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 5/68 (7%)
Query: 58 TDHTSGKYDSDKGQFTFTVIKVNTGEHFPDLDLISKLLIPPVKHRVAKPGIEVMSEPNNV 117
D +G +D + FT+IK+N H L+ K LI P ++ G +++E NV
Sbjct: 48 VDKIAGAFDDN-----FTLIKMNQISHLEKALLVEKHLISPYMMNKSEYGAVLLNEEENV 102
Query: 118 SDEDEDED 125
S +ED
Sbjct: 103 SIMLNEED 110
>sp|Q8SWH4|Y208_ENCCU UPF0329 protein ECU02_0080 OS=Encephalitozoon cuniculi (strain
GB-M1) GN=ECU02_0080 PE=3 SV=1
Length = 579
Score = 32.3 bits (72), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 82/178 (46%), Gaps = 28/178 (15%)
Query: 229 YASDVRQAQDDRTQMTPSELDTMKQ-------LGNREY--LLSSEEKCAVLLSLVNILYA 279
Y SD+ + +D T++ PSE+D K+ + N++Y LS+ + ++ + I+
Sbjct: 152 YGSDIIKMTEDMTKLVPSEVDERKRRKLAAFLVANKKYGESLSNIARWRRIVEVEKIVCD 211
Query: 280 YCYDVRTTMGEHTVESGWTVNKLSSALCWLQSFTSLKQVLISSMRR-SLCYPLYREWRLS 338
C + + + E L L + S+++ L + R + Y LY E +
Sbjct: 212 ACEKICSDLKEE-------------ELMRLLAEGSMRKALRKGLGRDKINYRLYLECIFT 258
Query: 339 -CAIQQDVNTILSQDILGYKVMKQVTISKSDLGFDLDELETAARIVEE---EEVERAL 392
+ D + D++ +++KQ+ + K D + ++ AR+V+E E+E+++
Sbjct: 259 DIRLLSDAHKKYGGDVI-KELVKQILLGKKGEEIDREYIDKVARVVQERQKREIEKSM 315
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.132 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 146,470,078
Number of Sequences: 539616
Number of extensions: 6117785
Number of successful extensions: 23777
Number of sequences better than 100.0: 48
Number of HSP's better than 100.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 37
Number of HSP's that attempted gapping in prelim test: 23656
Number of HSP's gapped (non-prelim): 106
length of query: 407
length of database: 191,569,459
effective HSP length: 120
effective length of query: 287
effective length of database: 126,815,539
effective search space: 36396059693
effective search space used: 36396059693
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)