Your job contains 1 sequence.
>psy5045
MLTPMFELLQSEEDVTIIIKAPYANIADTEVYVEDTDFRFSSSPYYLRLNFPGPIKETDH
TSGKYDSDKGQFTFTVIKVNTGEHFPDLDLISKLLIPPVKHRVAKPGIEVMSEPNNVSDE
DEDEDDDTMWFIEQEPQHQPEENSTTYGYGFANKTKGTLTNMKVTISKSDLGFDLEELET
AARIVEEEEVERALCNHVSTLVLCSNSEQSERSIIFFIGLDFWVVSRDYASDVRQAQDDR
TQMTPSELDTMKQLGNREYLLSSEEKCAVLLSLVNILYAYCYDVRTTMGEHTVESGWTVN
KLSSALCWLQSFTSLKQVLISSMRRSLCYPLYREWRLSCAIQQDVNTILSQDILGYKVMK
QVTISKSDLGFDLDELETAARIVEEEEVERALCNHVSTLVLCSDSEQ
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy5045
(407 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
MGI|MGI:1919421 - symbol:Shq1 "SHQ1 homolog (S. cerevisia... 276 2.5e-49 3
UNIPROTKB|Q6PI26 - symbol:SHQ1 "Protein SHQ1 homolog" spe... 282 4.0e-49 3
UNIPROTKB|Q05B18 - symbol:shq1 "Protein SHQ1 homolog" spe... 270 9.4e-49 3
UNIPROTKB|Q3MHH1 - symbol:SHQ1 "Protein SHQ1 homolog" spe... 286 7.3e-47 2
UNIPROTKB|E2QW11 - symbol:SHQ1 "Uncharacterized protein" ... 293 8.4e-47 2
ZFIN|ZDB-GENE-070112-1412 - symbol:shq1 "SHQ1 homolog (S.... 480 1.0e-45 1
UNIPROTKB|F1SFN0 - symbol:SHQ1 "Uncharacterized protein" ... 274 1.8e-44 2
UNIPROTKB|E1C0W2 - symbol:SHQ1 "Uncharacterized protein" ... 257 1.3e-43 3
POMBASE|SPBC8D2.13 - symbol:shq1 "box H/ACA snoRNP assemb... 233 8.1e-35 3
UNIPROTKB|Q9TYM6 - symbol:Y48A5A.1 "Protein SHQ1 homolog"... 223 5.9e-32 2
UNIPROTKB|B4DL05 - symbol:SHQ1 "Protein SHQ1 homolog" spe... 228 4.3e-30 3
RGD|1310610 - symbol:Shq1 "SHQ1, H/ACA ribonucleoprotein ... 280 1.6e-24 1
CGD|CAL0003486 - symbol:orf19.5206 species:5476 "Candida ... 175 1.5e-23 2
SGD|S000001366 - symbol:SHQ1 "Chaperone protein required ... 155 2.2e-15 3
FB|FBgn0037482 - symbol:CG10055 species:7227 "Drosophila ... 170 2.1e-09 2
>MGI|MGI:1919421 [details] [associations]
symbol:Shq1 "SHQ1 homolog (S. cerevisiae)" species:10090
"Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005654 "nucleoplasm"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0022618
"ribonucleoprotein complex assembly" evidence=ISO] [GO:0043065
"positive regulation of apoptotic process" evidence=ISO]
[GO:2000233 "negative regulation of rRNA processing" evidence=ISO]
MGI:MGI:1919421 GO:GO:0005829 GO:GO:0005737 GO:GO:0005654
GO:GO:0043065 InterPro:IPR008978 SUPFAM:SSF49764 InterPro:IPR007052
PROSITE:PS51203 GO:GO:2000233 KO:K14764 CTD:55164 eggNOG:NOG287505
GeneTree:ENSGT00390000007605 HOGENOM:HOG000070000
HOVERGEN:HBG062935 OMA:ESALNPQ OrthoDB:EOG4W9J4J GO:GO:0022618
InterPro:IPR007009 Pfam:PF04925 EMBL:AK012978 EMBL:BC052657
IPI:IPI00330064 IPI:IPI00856808 RefSeq:NP_853621.2
UniGene:Mm.256022 ProteinModelPortal:Q7TMX5 SMR:Q7TMX5
STRING:Q7TMX5 PhosphoSite:Q7TMX5 PaxDb:Q7TMX5 PRIDE:Q7TMX5
Ensembl:ENSMUST00000089245 Ensembl:ENSMUST00000113312
Ensembl:ENSMUST00000170667 GeneID:72171 KEGG:mmu:72171
UCSC:uc009dby.2 UCSC:uc009dbz.2 InParanoid:Q7TMX5 NextBio:335619
Bgee:Q7TMX5 CleanEx:MM_SHQ1 Genevestigator:Q7TMX5 Uniprot:Q7TMX5
Length = 569
Score = 276 (102.2 bits), Expect = 2.5e-49, Sum P(3) = 2.5e-49
Identities = 61/170 (35%), Positives = 90/170 (52%)
Query: 1 MLTPMFELLQSEEDVTIIIKAPYANIADTEVYVEDTDFRFSSSPYYLRLNFPGPIKETDH 60
MLTP FEL Q + +T+ I+ P+A ++ +VY E DF+F + PY+LRL PG I E
Sbjct: 1 MLTPAFELTQDCDFLTVAIRVPHARASEFDVYFEGVDFKFYAKPYFLRLTLPGRIVENGS 60
Query: 61 TSGKYDSDKGQFTFTVIKVNTGEHFPDLDLISKLLIPPVKHRVAKPGIEVMSEPNNVSXX 120
G YD+DKG FT + K G+HF L++++ LL P K R AKP +E +
Sbjct: 61 EQGTYDADKGIFTIRLPKETPGQHFEGLNMLTALLAPR-KSRSAKPLVEEIGASGVAEEG 119
Query: 121 XXXXXXXTMWFIEQEPQHQPEENS--TTYGYGFANKTKGTLTNMKVTISK 168
W IEQ P + E++ + YGF N G + ++ +S+
Sbjct: 120 ADDEDEEFDWEIEQTPYEEVSESTLQSQCHYGFGNLRAGVVQRLQDELSE 169
Score = 248 (92.4 bits), Expect = 2.5e-49, Sum P(3) = 2.5e-49
Identities = 46/99 (46%), Positives = 64/99 (64%)
Query: 251 MKQLGNREYLLSSEEKCAVLLSLVNILYAYCYDVRTTMGEHTVESGWTVNKLSSALCWLQ 310
+++ N+ YLL V LV+IL AYCY+VR T GEH+VES WT+ KLS LCW +
Sbjct: 255 LRKFVNKSYLLDKTAHRQVYYGLVDILLAYCYEVRVTEGEHSVESAWTIRKLSPTLCWFE 314
Query: 311 SFTSLKQVLISSMRRSLCYPLYREWRLSCAIQQDVNTIL 349
++T + ++L+S RR LCYPLYR ++L +D IL
Sbjct: 315 TWTDVHEILVSFGRRVLCYPLYRHFKLVLKAYRDTIKIL 353
Score = 40 (19.1 bits), Expect = 2.5e-49, Sum P(3) = 2.5e-49
Identities = 7/17 (41%), Positives = 13/17 (76%)
Query: 357 KVMKQVTISKSDLGFDL 373
+ +K V++SK+ LG +L
Sbjct: 405 EALKAVSLSKAQLGLEL 421
>UNIPROTKB|Q6PI26 [details] [associations]
symbol:SHQ1 "Protein SHQ1 homolog" species:9606 "Homo
sapiens" [GO:0005829 "cytosol" evidence=IEA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0015030 "Cajal body" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005654
"nucleoplasm" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0022618 "ribonucleoprotein complex assembly" evidence=IDA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IDA] [GO:2000233 "negative regulation of rRNA processing"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] GO:GO:0005829
GO:GO:0005737 GO:GO:0005654 GO:GO:0043065 InterPro:IPR008978
SUPFAM:SSF49764 InterPro:IPR007052 PROSITE:PS51203 GO:GO:2000233
KO:K14764 CTD:55164 eggNOG:NOG287505 HOGENOM:HOG000070000
HOVERGEN:HBG062935 OMA:ESALNPQ OrthoDB:EOG4W9J4J GO:GO:0022618
InterPro:IPR007009 Pfam:PF04925 EMBL:AK001401 EMBL:AK024656
EMBL:BC017204 EMBL:BC017274 EMBL:BC025270 EMBL:BC032671
EMBL:BC039830 EMBL:BC047879 EMBL:BX641074 IPI:IPI00465265
RefSeq:NP_060600.2 UniGene:Hs.606584 ProteinModelPortal:Q6PI26
SMR:Q6PI26 IntAct:Q6PI26 STRING:Q6PI26 PhosphoSite:Q6PI26
DMDM:158563966 PRIDE:Q6PI26 Ensembl:ENST00000325599 GeneID:55164
KEGG:hsa:55164 UCSC:uc003dpf.3 GeneCards:GC03M072883
H-InvDB:HIX0003461 HGNC:HGNC:25543 HPA:HPA042792 MIM:613663
neXtProt:NX_Q6PI26 PharmGKB:PA142670921 InParanoid:Q6PI26
GenomeRNAi:55164 NextBio:58929 ArrayExpress:Q6PI26 Bgee:Q6PI26
CleanEx:HS_SHQ1 Genevestigator:Q6PI26 Uniprot:Q6PI26
Length = 577
Score = 282 (104.3 bits), Expect = 4.0e-49, Sum P(3) = 4.0e-49
Identities = 67/172 (38%), Positives = 94/172 (54%)
Query: 1 MLTPMFELLQSEEDVTIIIKAPYANIADTEVYVEDTDFRFSSSPYYLRLNFPGPIKETDH 60
MLTP F+L Q + +TI I+ PYA +++ +VY E +DF+F + PY+LRL PG I E
Sbjct: 1 MLTPAFDLSQDPDFLTIAIRVPYARVSEFDVYFEGSDFKFYAKPYFLRLTLPGRIVENGS 60
Query: 61 TSGKYDSDKGQFTFTVIKVNTGEHFPDLDLISKLLIPPVKHRVAKPGIEVM--SE-PNNV 117
G YD+DKG FT + K G+HF L++++ LL P K R AKP +E + SE P V
Sbjct: 61 EQGSYDADKGIFTIRLPKETPGQHFEGLNMLTALLAPR-KSRTAKPLVEEIGASEIPEEV 119
Query: 118 SXXXXXXXXXTMWFIEQEPQHQPEENSTT--YGYGFANKTKGTLTNMKVTIS 167
W IEQ P + E++ YGF N G L ++ +S
Sbjct: 120 VDDEEFD-----WEIEQTPCEEVSESALNPQCHYGFGNLRSGVLQRLQDELS 166
Score = 228 (85.3 bits), Expect = 4.0e-49, Sum P(3) = 4.0e-49
Identities = 42/99 (42%), Positives = 61/99 (61%)
Query: 251 MKQLGNREYLLSSEEKCAVLLSLVNILYAYCYDVRTTMGEHTVESGWTVNKLSSALCWLQ 310
+++ N+ YLL V SL++IL AYCY+ R T GE VES W + KLS LCW +
Sbjct: 253 LRKFVNKSYLLDKRACRQVCYSLIDILLAYCYETRVTEGEKNVESAWNIRKLSPTLCWFE 312
Query: 311 SFTSLKQVLISSMRRSLCYPLYREWRLSCAIQQDVNTIL 349
++T++ +++S RR LCYPLYR ++L +D IL
Sbjct: 313 TWTNVHDIMVSFGRRVLCYPLYRHFKLVMKAYRDTIKIL 351
Score = 52 (23.4 bits), Expect = 4.0e-49, Sum P(3) = 4.0e-49
Identities = 13/51 (25%), Positives = 23/51 (45%)
Query: 357 KVMKQVTISKSDLGFDLDXXXXXXXXXXXXXXXXXXCNHVS-TLVLCSDSE 406
+ +K+V+++K+ LG +L+ + VS LCS SE
Sbjct: 403 EALKEVSLTKAQLGLELEELEAAALLVQEEETALKAAHSVSGQQTLCSSSE 453
>UNIPROTKB|Q05B18 [details] [associations]
symbol:shq1 "Protein SHQ1 homolog" species:8364 "Xenopus
(Silurana) tropicalis" [GO:0022618 "ribonucleoprotein complex
assembly" evidence=ISS] GO:GO:0005829 GO:GO:0005654
InterPro:IPR008978 SUPFAM:SSF49764 InterPro:IPR007052
PROSITE:PS51203 KO:K14764 CTD:55164 GO:GO:0022618
InterPro:IPR007009 Pfam:PF04925 EMBL:BC123006 RefSeq:NP_001072616.1
UniGene:Str.24608 GeneID:780072 KEGG:xtr:780072
Xenbase:XB-GENE-5820245 HOVERGEN:HBG101384 Uniprot:Q05B18
Length = 604
Score = 270 (100.1 bits), Expect = 9.4e-49, Sum P(3) = 9.4e-49
Identities = 60/165 (36%), Positives = 88/165 (53%)
Query: 1 MLTPMFELLQSEEDVTIIIKAPYANIADTEVYVEDTDFRFSSSPYYLRLNFPGPIKETDH 60
M+TP F++ Q + +TIIIK PYA ++ ++Y+E DF+F + PY+LRL PG I E
Sbjct: 1 MITPAFDISQDSDFLTIIIKVPYARASEIDIYIEGDDFKFYAKPYFLRLALPGRIVEDGR 60
Query: 61 TSGKYDSDKGQFTFTVIKVNTGEHFPDLDLISKLLIPPVKHRVAKPGIEVMSEPNNVSXX 120
Y++D G T +V K G+HF LDL++ LL P + AKP +E + +NV
Sbjct: 61 QKATYNADDGIITVSVPKETPGQHFEGLDLLTSLLAPRGS-KSAKPLVEEIGSSDNVVEE 119
Query: 121 XXXXXXXTMWFIEQEPQHQPEENS--TTYGYGFANKTKGTLTNMK 163
W IEQ P +P E + + YGF N G ++
Sbjct: 120 EEDEFD---WQIEQTPFVEPTEEALQSQCTYGFGNLRSGVFRRLQ 161
Score = 242 (90.2 bits), Expect = 9.4e-49, Sum P(3) = 9.4e-49
Identities = 45/117 (38%), Positives = 73/117 (62%)
Query: 223 WVVSRDYA--SDVRQAQDDRTQMTPSELDTMKQLGNREYLLSSEEKCAVLLSLVNILYAY 280
W V+ +A S ++Q+ R + + + +++ N+ +LL + + L L+++L AY
Sbjct: 217 WWVAEIHAGCSLSAESQERRVSFSDKQKEQLRKFTNKSHLLDKKTQQQAYLGLIDLLLAY 276
Query: 281 CYDVRTTMGEHTVESGWTVNKLSSALCWLQSFTSLKQVLISSMRRSLCYPLYREWRL 337
CY+VR T G+ VES W + KLSS L W ++FT +K +L+S RR LCYPLYR ++L
Sbjct: 277 CYEVRVTEGDQNVESAWNIRKLSSTLSWFENFTCVKDILVSFGRRVLCYPLYRNFQL 333
Score = 49 (22.3 bits), Expect = 9.4e-49, Sum P(3) = 9.4e-49
Identities = 9/15 (60%), Positives = 14/15 (93%)
Query: 359 MKQVTISKSDLGFDL 373
++ ++ISKSDLGF+L
Sbjct: 399 VQSLSISKSDLGFEL 413
Score = 47 (21.6 bits), Expect = 3.6e-25, Sum P(2) = 3.6e-25
Identities = 9/12 (75%), Positives = 12/12 (100%)
Query: 164 VTISKSDLGFDL 175
++ISKSDLGF+L
Sbjct: 402 LSISKSDLGFEL 413
>UNIPROTKB|Q3MHH1 [details] [associations]
symbol:SHQ1 "Protein SHQ1 homolog" species:9913 "Bos
taurus" [GO:0022618 "ribonucleoprotein complex assembly"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0005654
"nucleoplasm" evidence=ISS] [GO:0005829 "cytosol" evidence=IEA]
[GO:2000233 "negative regulation of rRNA processing" evidence=IEA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IEA] GO:GO:0005829 GO:GO:0005737 GO:GO:0005654
GO:GO:0043065 InterPro:IPR008978 SUPFAM:SSF49764 InterPro:IPR007052
PROSITE:PS51203 GO:GO:2000233 KO:K14764 EMBL:BC105240
IPI:IPI00703662 RefSeq:NP_001030221.1 UniGene:Bt.62564
STRING:Q3MHH1 PRIDE:Q3MHH1 Ensembl:ENSBTAT00000007154 GeneID:507486
KEGG:bta:507486 CTD:55164 eggNOG:NOG287505
GeneTree:ENSGT00390000007605 HOGENOM:HOG000070000
HOVERGEN:HBG062935 InParanoid:Q3MHH1 OMA:ESALNPQ OrthoDB:EOG4W9J4J
NextBio:20868086 ArrayExpress:Q3MHH1 GO:GO:0022618
InterPro:IPR007009 Pfam:PF04925 Uniprot:Q3MHH1
Length = 579
Score = 286 (105.7 bits), Expect = 7.3e-47, Sum P(2) = 7.3e-47
Identities = 63/170 (37%), Positives = 92/170 (54%)
Query: 1 MLTPMFELLQSEEDVTIIIKAPYANIADTEVYVEDTDFRFSSSPYYLRLNFPGPIKETDH 60
MLTP F+L Q + +T+ I+ PYA +++ +VY E DF+F + PY+LRL PG I E +
Sbjct: 1 MLTPAFDLSQDPDFLTVAIRVPYARVSEFDVYFEGVDFKFYAKPYFLRLTLPGRIVENGN 60
Query: 61 TSGKYDSDKGQFTFTVIKVNTGEHFPDLDLISKLLIPPVKHRVAKPGIEVMSEPNNVSXX 120
G YD+DKG FT + K G+HF L++++ LL P K R AKP +E + + VS
Sbjct: 61 EQGSYDADKGIFTIRLPKETPGQHFEGLNMLTALLAPR-KSRTAKPLVEEIGA-SEVSEG 118
Query: 121 XXXXXXXTM-WFIEQEPQHQPEENSTTYG--YGFANKTKGTLTNMKVTIS 167
W IEQ P + E++ YGF N G ++ +S
Sbjct: 119 GVEDDDDEFDWEIEQSPYEEVPESALNPNCRYGFGNLRSGVFQRLQDELS 168
Score = 236 (88.1 bits), Expect = 7.3e-47, Sum P(2) = 7.3e-47
Identities = 43/99 (43%), Positives = 63/99 (63%)
Query: 251 MKQLGNREYLLSSEEKCAVLLSLVNILYAYCYDVRTTMGEHTVESGWTVNKLSSALCWLQ 310
+++ N+ YLL + V SL++IL AYCY+ R T GE VES W + KLS LCW +
Sbjct: 255 LRKFVNKSYLLDKKAHRQVYYSLIDILLAYCYETRVTEGERNVESAWNIRKLSPTLCWFE 314
Query: 311 SFTSLKQVLISSMRRSLCYPLYREWRLSCAIQQDVNTIL 349
++T++ ++L+S RR LCYPLYR ++L +D IL
Sbjct: 315 TWTNVHEILVSFGRRVLCYPLYRHFKLVMKTYRDTIKIL 353
>UNIPROTKB|E2QW11 [details] [associations]
symbol:SHQ1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000233 "negative regulation of rRNA
processing" evidence=IEA] [GO:0043065 "positive regulation of
apoptotic process" evidence=IEA] [GO:0022618 "ribonucleoprotein
complex assembly" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] GO:GO:0005737
GO:GO:0005654 GO:GO:0043065 InterPro:IPR008978 SUPFAM:SSF49764
InterPro:IPR007052 PROSITE:PS51203 GO:GO:2000233 KO:K14764
CTD:55164 GeneTree:ENSGT00390000007605 OMA:ESALNPQ GO:GO:0022618
InterPro:IPR007009 Pfam:PF04925 EMBL:AAEX03012117 EMBL:AAEX03012118
RefSeq:XP_533763.2 Ensembl:ENSCAFT00000010390 GeneID:476557
KEGG:cfa:476557 Uniprot:E2QW11
Length = 579
Score = 293 (108.2 bits), Expect = 8.4e-47, Sum P(2) = 8.4e-47
Identities = 64/170 (37%), Positives = 91/170 (53%)
Query: 1 MLTPMFELLQSEEDVTIIIKAPYANIADTEVYVEDTDFRFSSSPYYLRLNFPGPIKETDH 60
MLTP F+L Q +T+ I+ PYA +++ +VY E DFRF + PY+LRL PG + E
Sbjct: 1 MLTPAFDLSQDPAFLTVAIRVPYARVSEFDVYFEGVDFRFYAKPYFLRLTLPGRVVENGS 60
Query: 61 TSGKYDSDKGQFTFTVIKVNTGEHFPDLDLISKLLIPPVKHRVAKPGIEVMSEPNNVSXX 120
G YD+DKG FT + K G+HF L++++ LL P K R AKP +E + + VS
Sbjct: 61 EQGSYDADKGIFTIRLPKETPGQHFEGLNMLTALLAPR-KSRTAKPLVEEIGA-SEVSEE 118
Query: 121 XXXXXXXTM-WFIEQEPQHQPEENSTT--YGYGFANKTKGTLTNMKVTIS 167
W IEQ P + E++ Y YGF N G ++ +S
Sbjct: 119 RVEEEDEEFDWEIEQSPYEEASESALNPQYHYGFGNLRSGVFQRLQDELS 168
Score = 228 (85.3 bits), Expect = 8.4e-47, Sum P(2) = 8.4e-47
Identities = 42/99 (42%), Positives = 61/99 (61%)
Query: 251 MKQLGNREYLLSSEEKCAVLLSLVNILYAYCYDVRTTMGEHTVESGWTVNKLSSALCWLQ 310
+++ N+ YLL V L++IL AYCY+ T GE VES W + KLSS LCW +
Sbjct: 255 LRKFVNKSYLLDKRAHRQVYYGLIDILLAYCYETCVTEGERNVESAWNIRKLSSTLCWFE 314
Query: 311 SFTSLKQVLISSMRRSLCYPLYREWRLSCAIQQDVNTIL 349
++T++ ++L+S RR LCYPLYR ++L +D IL
Sbjct: 315 TWTNVHEILVSFGRRVLCYPLYRHFKLVMKAYRDTIKIL 353
>ZFIN|ZDB-GENE-070112-1412 [details] [associations]
symbol:shq1 "SHQ1 homolog (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0003674 "molecular_function"
evidence=ND] [GO:0022618 "ribonucleoprotein complex assembly"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005654 "nucleoplasm" evidence=IEA] ZFIN:ZDB-GENE-070112-1412
InterPro:IPR008978 SUPFAM:SSF49764 InterPro:IPR007052
PROSITE:PS51203 GeneTree:ENSGT00390000007605 OMA:ESALNPQ
InterPro:IPR007009 Pfam:PF04925 EMBL:BX119974 EMBL:BX546459
IPI:IPI00862539 Ensembl:ENSDART00000035513 Bgee:F1QC67
Uniprot:F1QC67
Length = 586
Score = 480 (174.0 bits), Expect = 1.0e-45, P = 1.0e-45
Identities = 119/352 (33%), Positives = 175/352 (49%)
Query: 1 MLTPMFELLQSEEDVTIIIKAPYANIADTEVYVEDTDFRFSSSPYYLRLNFPGPIKETDH 60
M+TP FEL Q + + ++I+ PY +D ++Y+++ +F+F + PY+LRL PG I E
Sbjct: 1 MITPAFELSQDADFLIVVIRVPYTRTSDFDIYIQEEEFKFYAKPYFLRLTLPGRIVEDGR 60
Query: 61 TSGKYDSDKGQFTFTVIKVNTGEHFPDLDLISKLLIPPVKHRVAKPGIEVMSEPNNVSXX 120
+D DKG FT V K G+HF L++++ LL P R AKP +E SE
Sbjct: 61 EKASFDIDKGLFTLHVPKETAGQHFEGLEMLTSLLAPKGS-RSAKPLVED-SEACGEGCE 118
Query: 121 XXXXXXXTMWFIEQEPQHQ-PEENSTTYG-YGFANKTKGTLTNMKVTISKS-DLGFDLXX 177
W IEQE + P + Y YGF N G + ++ +++ D+
Sbjct: 119 EEDEEFD--WQIEQEVYTEAPADTLKEYHKYGFGNLRSGVFSRLQEELNEVIDMKDPDNT 176
Query: 178 XXXXXXXXXXXXXXXXXC-NHVSTLVLCSNSEQSERSIIFFIGLDFWVVSRDYASDVRQA 236
C +H LV ++ R+++ F +W R D
Sbjct: 177 NAELRRRNRLDTETAVFCADHY--LVNLYEDKEEIRNLLKF--KPWW---RKLNPDPSAG 229
Query: 237 QDDRTQMTPSELDTMKQLGNREYLLSSEEKCAVLLSLVNILYAYCYDVRTTMGEHTVESG 296
D T E + M++ NR YLL + + V L LV+I+ AY YDVRTT GEH VES
Sbjct: 230 YDISMTFTEEEREQMRRFTNRSYLLDKKARFHVWLGLVDIILAYVYDVRTTEGEHNVESA 289
Query: 297 WTVNKLSSALCWLQSFTSLKQVLISSMRRSLCYPLYREWRLSCAIQQDVNTI 348
WT+ KLS L WL+++ S++ VL+S RR+LCYPLYR + L +D I
Sbjct: 290 WTIRKLSGTLSWLETYHSVQDVLVSFGRRTLCYPLYRHFSLVTLAVKDAACI 341
>UNIPROTKB|F1SFN0 [details] [associations]
symbol:SHQ1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2000233 "negative regulation of rRNA processing"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0022618 "ribonucleoprotein complex
assembly" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005654 "nucleoplasm" evidence=IEA] GO:GO:0005737 GO:GO:0005654
GO:GO:0043065 InterPro:IPR008978 SUPFAM:SSF49764 InterPro:IPR007052
PROSITE:PS51203 GO:GO:2000233 KO:K14764 CTD:55164
GeneTree:ENSGT00390000007605 OMA:ESALNPQ GO:GO:0022618
InterPro:IPR007009 Pfam:PF04925 EMBL:CU861537 EMBL:AEMK01179662
EMBL:CU469023 RefSeq:XP_003132372.3 Ensembl:ENSSSCT00000012605
GeneID:100511045 KEGG:ssc:100511045 Uniprot:F1SFN0
Length = 579
Score = 274 (101.5 bits), Expect = 1.8e-44, Sum P(2) = 1.8e-44
Identities = 63/171 (36%), Positives = 91/171 (53%)
Query: 1 MLTPMFELLQSEEDVTIIIKAPYANIADTEVYVEDTDFRFSSSPYYLRLNFPGPIKETDH 60
MLTP F+L Q + +TI I+ PYA +++ +VY E DF+F + PY+LRL PG I E
Sbjct: 1 MLTPAFDLSQDPDFLTIAIRVPYARVSEFDVYFEGLDFKFYAKPYFLRLTLPGRIVENGR 60
Query: 61 TSGKYDSDKGQFTFTVIKVNTGEHFPDLDLISKLLIPPVKHRVAKPGIEVMSEPNNVSXX 120
G YD+DKG FT + K G+HF L++++ LL P K R AK +E + + VS
Sbjct: 61 EQGSYDADKGIFTIRLPKETPGQHFEGLNMLTALLAPR-KSRTAKLLVEEIGV-SEVSEE 118
Query: 121 XXXXXXXTM-WFIEQEPQHQPEENSTT--YGYGFANKTKGTLTNMKVTISK 168
W IEQ P + E++ YGF N G ++ +S+
Sbjct: 119 GVEDDDEEFDWEIEQSPYEEVPESALNPECRYGFGNLRSGVFQRLQDELSE 169
Score = 226 (84.6 bits), Expect = 1.8e-44, Sum P(2) = 1.8e-44
Identities = 51/148 (34%), Positives = 84/148 (56%)
Query: 208 EQSERSIIFFIGLDFW--VVSRDYASDVR-QAQDDRTQMTP-SELDT--MKQLGNREYLL 261
+++ + ++ +I +W + S+ S R Q +D T + SE + ++ N+ YLL
Sbjct: 208 DEAVKQVLEYI--PWWTDLYSKIMPSSKRNQEPEDFTALVSFSEEEKYQLRNFVNKSYLL 265
Query: 262 SSEEKCAVLLSLVNILYAYCYDVRTTMGEHTVESGWTVNKLSSALCWLQSFTSLKQVLIS 321
V SL++IL AYCY+ R T GE VES W + KLS LCW ++++++ ++L+S
Sbjct: 266 DKRAHRQVYYSLIDILLAYCYETRVTEGEKNVESAWNIRKLSPTLCWFETWSNVHEILVS 325
Query: 322 SMRRSLCYPLYREWRLSCAIQQDVNTIL 349
RR LCYPL+R ++L +D IL
Sbjct: 326 FGRRVLCYPLHRHFKLVMEAYRDTIKIL 353
>UNIPROTKB|E1C0W2 [details] [associations]
symbol:SHQ1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0022618 "ribonucleoprotein complex
assembly" evidence=IEA] [GO:0043065 "positive regulation of
apoptotic process" evidence=IEA] [GO:2000233 "negative regulation
of rRNA processing" evidence=IEA] GO:GO:0005737 GO:GO:0005654
GO:GO:0043065 InterPro:IPR008978 SUPFAM:SSF49764 InterPro:IPR007052
PROSITE:PS51203 GO:GO:2000233 GeneTree:ENSGT00390000007605
OMA:ESALNPQ GO:GO:0022618 InterPro:IPR007009 Pfam:PF04925
EMBL:AADN02014446 EMBL:AADN02014447 EMBL:AADN02014448
IPI:IPI00603278 Ensembl:ENSGALT00000012646 ArrayExpress:E1C0W2
Uniprot:E1C0W2
Length = 580
Score = 257 (95.5 bits), Expect = 1.3e-43, Sum P(3) = 1.3e-43
Identities = 58/171 (33%), Positives = 87/171 (50%)
Query: 1 MLTPMFELLQSEEDVTIIIKAPYANIADTEVYVEDTDFRFSSSPYYLRLNFPGPIKETDH 60
M+TP FEL Q + +T+II+ PYA +++ +++ E DF+F + PY+LRL PG + E
Sbjct: 1 MITPDFELSQDPDFLTVIIRVPYARVSELDLFFEGEDFKFYAKPYFLRLTLPGRVVEDGR 60
Query: 61 TSGKYDSDKGQFTFTVIKVNTGEHFPDLDLISKLLIPPVKHRVAKPGIE-VMSEPNNVSX 119
YD+DKG FT + K + G++F LD+++ LL P K R AKP +E + V
Sbjct: 61 EKASYDTDKGVFTIQLPKESPGQYFEGLDMLTSLLAPK-KSRTAKPLVEEIDGGSKGVPA 119
Query: 120 XXXXXXXXTM-WFIEQEPQHQPEENSTTYG--YGFANKTKGTLTNMKVTIS 167
W IEQ + E YGF N G ++ +S
Sbjct: 120 EEEEEEEEEFDWEIEQTLYKEAAEGPVPLQCYYGFGNLRSGVFQRLQDELS 170
Score = 241 (89.9 bits), Expect = 1.3e-43, Sum P(3) = 1.3e-43
Identities = 46/103 (44%), Positives = 63/103 (61%)
Query: 247 ELDTMKQLGNREYLLSSEEKCAVLLSLVNILYAYCYDVRTTMGEHTVESGWTVNKLSSAL 306
E + +++ N+ YLL + V L L++IL AYCY++R G+ VES W V KLS+ L
Sbjct: 253 EREQLRKFTNKSYLLDKTSRHLVYLGLIDILLAYCYEIRVNEGDKNVESSWNVRKLSATL 312
Query: 307 CWLQSFTSLKQVLISSMRRSLCYPLYREWRLSCAIQQDVNTIL 349
CWL+ FTS+ VL+S RR +CYPLYR + L D IL
Sbjct: 313 CWLECFTSIHDVLVSFGRRVVCYPLYRHFGLVTRAFNDTVMIL 355
Score = 44 (20.5 bits), Expect = 1.3e-43, Sum P(3) = 1.3e-43
Identities = 7/16 (43%), Positives = 14/16 (87%)
Query: 359 MKQVTISKSDLGFDLD 374
+++ T++KS LGF+L+
Sbjct: 409 LQKTTLAKSHLGFELE 424
Score = 43 (20.2 bits), Expect = 2.7e-21, Sum P(2) = 2.7e-21
Identities = 8/13 (61%), Positives = 11/13 (84%)
Query: 163 KVTISKSDLGFDL 175
K T++KS LGF+L
Sbjct: 411 KTTLAKSHLGFEL 423
>POMBASE|SPBC8D2.13 [details] [associations]
symbol:shq1 "box H/ACA snoRNP assembly protein Shq1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000493
"box H/ACA snoRNP assembly" evidence=ISS] [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0005829
"cytosol" evidence=IDA] [GO:0006364 "rRNA processing" evidence=IC]
PomBase:SPBC8D2.13 GO:GO:0005829 GO:GO:0005730 EMBL:CU329671
GenomeReviews:CU329671_GR InterPro:IPR008978 SUPFAM:SSF49764
EMBL:AB004538 GO:GO:0006364 InterPro:IPR007052 PROSITE:PS51203
GO:GO:0000493 KO:K14764 eggNOG:NOG287505 HOGENOM:HOG000070000
OMA:ESALNPQ InterPro:IPR007009 Pfam:PF04925 PIR:T40758
RefSeq:NP_595575.1 STRING:O43076 EnsemblFungi:SPBC8D2.13.1
GeneID:2541267 KEGG:spo:SPBC8D2.13 OrthoDB:EOG41RT3K
NextBio:20802379 Uniprot:O43076
Length = 451
Score = 233 (87.1 bits), Expect = 8.1e-35, Sum P(3) = 8.1e-35
Identities = 50/128 (39%), Positives = 77/128 (60%)
Query: 228 DYASD---VRQAQDDRT-QMTPSELDTMKQLGNREYLLSSEEKCAVLLSLVNILYAYCYD 283
DY + V+Q + DR + T E + + +L R YL+ + + V L LV +++AY YD
Sbjct: 236 DYIGEFLLVQQGKSDRLLEFTSEEKEALAKLPKRSYLIDNPKN--VYLCLVPLIFAYAYD 293
Query: 284 VRTTMGEHTVESGWTVNKLSSAL-CWLQSFTSLKQVLISSMRRSLCYPLYREWRLSCAIQ 342
RTT+G+ T+ES W + LSS + C +F ++K + I+ +RRSL YPLYR W L+
Sbjct: 294 NRTTLGDPTIESCWNIGTLSSTISCLDTNFLAIKDIFIACIRRSLAYPLYRNWDLALTCW 353
Query: 343 QDVNTILS 350
+D + ILS
Sbjct: 354 KDTHAILS 361
Score = 193 (73.0 bits), Expect = 8.1e-35, Sum P(3) = 8.1e-35
Identities = 41/113 (36%), Positives = 59/113 (52%)
Query: 1 MLTPMFELLQSEEDVTIIIKAPYANIADTEVYVEDTDFRFSSSPYYLRLNFPGPIKETDH 60
M+TP FEL Q EE V + + PY + E+ + + F +PY+L+L PG + + D
Sbjct: 1 MITPKFELRQDEEFVYLDVHTPYIKAKNVEIDAFNNEVNFCIAPYFLKLELPGNVLDDDR 60
Query: 61 TSGKYDSDKGQFTFTVIKVNTGEHFPDLDLISKLLIPPVKHRVAKPGIEVMSE 113
+ YD G K GE FPDLDL++ LL+ K V KP IE + +
Sbjct: 61 ANASYDISSGFVHIKFPKETPGEVFPDLDLLTTLLVNQNKEPVKKPLIEEVED 113
Score = 41 (19.5 bits), Expect = 8.1e-35, Sum P(3) = 8.1e-35
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 130 WFIEQEPQHQPEENSTTYGYGFANKTKGTL 159
W + Q + + ++T YGF N+ G L
Sbjct: 147 WGLLQRLDDEKMQYTSTSQYGFNNQYSGLL 176
>UNIPROTKB|Q9TYM6 [details] [associations]
symbol:Y48A5A.1 "Protein SHQ1 homolog" species:6239
"Caenorhabditis elegans" [GO:0022618 "ribonucleoprotein complex
assembly" evidence=ISS] KO:K14764 eggNOG:NOG287505
GeneTree:ENSGT00390000007605 OMA:ESALNPQ GO:GO:0022618
InterPro:IPR007009 Pfam:PF04925 EMBL:FO081439 RefSeq:NP_500150.2
ProteinModelPortal:Q9TYM6 SMR:Q9TYM6 STRING:Q9TYM6 PaxDb:Q9TYM6
EnsemblMetazoa:Y48A5A.1.1 EnsemblMetazoa:Y48A5A.1.2 GeneID:176997
KEGG:cel:CELE_Y48A5A.1 UCSC:Y48A5A.1 CTD:176997 WormBase:Y48A5A.1
HOGENOM:HOG000199612 InParanoid:Q9TYM6 NextBio:894912
Uniprot:Q9TYM6
Length = 431
Score = 223 (83.6 bits), Expect = 5.9e-32, Sum P(2) = 5.9e-32
Identities = 56/176 (31%), Positives = 97/176 (55%)
Query: 1 MLTPMFELLQSEEDVTIIIKAPYANIADTEVYVEDTDFRFSSSPYYLRLNFPGPIKETDH 60
MLTP+F + Q ++ + I I+AP+ NIA+ + D F F+ PY+LRL+F ++E
Sbjct: 1 MLTPVFWITQDDDALLIRIRAPHGNIAELDYDHGDYMFVFTCPPYFLRLHFKQMVEEYGS 60
Query: 61 TSG--KYDSDKGQFTFTVIKVNTGEHFPDLDLISKLLIPPVKHRVAKP-GIEVMSEPNNV 117
+G ++ SD+G+F V K++ EHF +LD+I++LL P H +P G +++ E ++
Sbjct: 61 GNGSVEWKSDEGEFHIKVPKMHKKEHFSNLDMITELLTPSTTHH--QPHGNQLVEEMDD- 117
Query: 118 SXXXXXXXXXTMWFIEQEPQHQPEENSTT-----YGYGFANKTKGTLTNMKVTISK 168
+ + +EQ+P +PEE + +GYGF G + ++ I K
Sbjct: 118 -SEDDDEGDGSEFLVEQQPAAEPEEPKSDGKIEKFGYGFGWSKFGVIERLRDEIGK 172
Score = 187 (70.9 bits), Expect = 5.9e-32, Sum P(2) = 5.9e-32
Identities = 42/127 (33%), Positives = 73/127 (57%)
Query: 224 VVSRDYASDVRQAQDDRTQMTPSELDTMKQLGNREYLLSSEEKCAVLLSLVNILYAYCYD 283
V+S +A + + +DRT++ D K + + + E ++ SL++I++ YCYD
Sbjct: 218 VISSKFAQKLEISDEDRTKLK----DLKKSKTSAKINGNDVE---IMTSLIDIVFGYCYD 270
Query: 284 VRTTMGEHTVESGWTVNKLSSALCWLQSFTSLKQVLISSMRRSLCYPLYREWRLSCAIQQ 343
R E ESGW KLS +L + F+S+K+ L++ RR+L YPLYR ++L+ + Q
Sbjct: 271 QRVNDWESACESGWNCAKLSPSLSFFAKFSSVKECLLACTRRALTYPLYRSFQLTQRVIQ 330
Query: 344 DVNTILS 350
DV +++
Sbjct: 331 DVCHVIT 337
Score = 38 (18.4 bits), Expect = 2.2e-16, Sum P(2) = 2.2e-16
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 159 LTNMKVTISKSDLGFDL 175
LT + I K D+G+DL
Sbjct: 393 LTEISGKIDKYDIGWDL 409
>UNIPROTKB|B4DL05 [details] [associations]
symbol:SHQ1 "Protein SHQ1 homolog" species:9606 "Homo
sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
GO:GO:0005634 GO:GO:0005737 EMBL:AC114876 HOGENOM:HOG000070000
HOVERGEN:HBG062935 InterPro:IPR007009 Pfam:PF04925
UniGene:Hs.606584 HGNC:HGNC:25543 EMBL:AC134050 EMBL:AK296789
IPI:IPI00784283 SMR:B4DL05 STRING:B4DL05 Ensembl:ENST00000463369
Uniprot:B4DL05
Length = 549
Score = 228 (85.3 bits), Expect = 4.3e-30, Sum P(3) = 4.3e-30
Identities = 42/99 (42%), Positives = 61/99 (61%)
Query: 251 MKQLGNREYLLSSEEKCAVLLSLVNILYAYCYDVRTTMGEHTVESGWTVNKLSSALCWLQ 310
+++ N+ YLL V SL++IL AYCY+ R T GE VES W + KLS LCW +
Sbjct: 225 LRKFVNKSYLLDKRACRQVCYSLIDILLAYCYETRVTEGEKNVESAWNIRKLSPTLCWFE 284
Query: 311 SFTSLKQVLISSMRRSLCYPLYREWRLSCAIQQDVNTIL 349
++T++ +++S RR LCYPLYR ++L +D IL
Sbjct: 285 TWTNVHDIMVSFGRRVLCYPLYRHFKLVMKAYRDTIKIL 323
Score = 150 (57.9 bits), Expect = 4.3e-30, Sum P(3) = 4.3e-30
Identities = 44/124 (35%), Positives = 59/124 (47%)
Query: 49 LNFPGPIKETDHTSGKYDSDKGQFTFTVIKVNTGEHFPDLDLISKLLIPPVKHRVAKPGI 108
L PG I E G YD+DKG FT + K G+HF L++++ LL P K R AKP +
Sbjct: 21 LTLPGRIVENGSEQGSYDADKGIFTIRLPKETPGQHFEGLNMLTALLAPR-KSRTAKPLV 79
Query: 109 EVM--SE-PNNVSXXXXXXXXXTMWFIEQEPQHQPEENSTT--YGYGFANKTKGTLTNMK 163
E + SE P V W IEQ P + E++ YGF N G L ++
Sbjct: 80 EEIGASEIPEEVVDDEEFD-----WEIEQTPCEEVSESALNPQCHYGFGNLRSGVLQRLQ 134
Query: 164 VTIS 167
+S
Sbjct: 135 DELS 138
Score = 52 (23.4 bits), Expect = 4.3e-30, Sum P(3) = 4.3e-30
Identities = 13/51 (25%), Positives = 23/51 (45%)
Query: 357 KVMKQVTISKSDLGFDLDXXXXXXXXXXXXXXXXXXCNHVS-TLVLCSDSE 406
+ +K+V+++K+ LG +L+ + VS LCS SE
Sbjct: 375 EALKEVSLTKAQLGLELEELEAAALLVQEEETALKAAHSVSGQQTLCSSSE 425
>RGD|1310610 [details] [associations]
symbol:Shq1 "SHQ1, H/ACA ribonucleoprotein assembly factor"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0022618 "ribonucleoprotein complex
assembly" evidence=ISO] [GO:0043065 "positive regulation of
apoptotic process" evidence=ISO] [GO:2000233 "negative regulation
of rRNA processing" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0015030 "Cajal body" evidence=ISO] RGD:1310610
InterPro:IPR008978 SUPFAM:SSF49764 InterPro:IPR007052
PROSITE:PS51203 InterPro:IPR007009 Pfam:PF04925 IPI:IPI00948197
Ensembl:ENSRNOT00000007409 ArrayExpress:D4A282 Uniprot:D4A282
Length = 284
Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 63/171 (36%), Positives = 93/171 (54%)
Query: 1 MLTPMFELLQSEEDVTIIIKAPYANIADTEVYVEDTDFRFSSSPYYLRLNFPGPIKETDH 60
MLTP FEL Q + +T+ I+ P+A ++ +VY E DF+F + PY+LRL PG I E
Sbjct: 1 MLTPAFELTQDRDFLTVAIRVPHARASEFDVYFEGVDFKFYAKPYFLRLTLPGRIVENGS 60
Query: 61 TSGKYDSDKGQFTFTVIKVNTGEHFPDLDLISKLLIPPVKHRVAKPGIEVMSEPNNVSXX 120
G YD+DKG FT + K G+HF L++++ LL P K R AKP +E + + VS
Sbjct: 61 EQGSYDADKGIFTIRLPKETPGQHFEGLNMLTALLAPR-KSRSAKPLVEEIGA-SGVSEE 118
Query: 121 XXXXXXXTM-WFIEQEPQHQPEENS--TTYGYGFANKTKGTLTNMKVTISK 168
W IEQ P + E++ + YGF N G + ++ +S+
Sbjct: 119 GADDEDEEFDWEIEQTPYEEVSESTLRSQCHYGFGNLRAGVVQRLQDELSE 169
>CGD|CAL0003486 [details] [associations]
symbol:orf19.5206 species:5476 "Candida albicans" [GO:0005654
"nucleoplasm" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0000493 "box H/ACA snoRNP assembly" evidence=IEA] [GO:0051082
"unfolded protein binding" evidence=IEA] CGD:CAL0003486
InterPro:IPR008978 SUPFAM:SSF49764 InterPro:IPR007052
PROSITE:PS51203 EMBL:AACQ01000227 EMBL:AACQ01000226 KO:K14764
eggNOG:NOG287505 InterPro:IPR007009 Pfam:PF04925 RefSeq:XP_710899.1
RefSeq:XP_710914.1 STRING:Q59MG2 GeneID:3647483 GeneID:3647497
KEGG:cal:CaO19.12673 KEGG:cal:CaO19.5206 Uniprot:Q59MG2
Length = 509
Score = 175 (66.7 bits), Expect = 1.5e-23, Sum P(2) = 1.5e-23
Identities = 43/116 (37%), Positives = 61/116 (52%)
Query: 1 MLTPMFELLQSEEDVTIIIKAPYANIA--DTEVYVEDTDFRFSSSPYYLRLNFPGPIKET 58
M+TP F + Q +E + I +K + + + E+ VE+ F FS PYYLRL FP P E
Sbjct: 1 MITPFFTISQDDEFIYIDVKISHIRFSAPNIEMTVENELFVFSLPPYYLRLRFPYPCIED 60
Query: 59 DHTSGKYDSDKGQFTFTVIKVNTGEHFPDLDLISKLLIPPVKHRVAKPGIEVMSEP 114
D + +YDS + K G+ FPDLDL +KLL + +V G S+P
Sbjct: 61 DRSHAEYDSKTECVKIKIPKETKGQFFPDLDLTAKLLARTNEPKVGDIGQANSSKP 116
Score = 167 (63.8 bits), Expect = 1.5e-23, Sum P(2) = 1.5e-23
Identities = 37/129 (28%), Positives = 67/129 (51%)
Query: 229 YASDVRQAQDDRTQMTPSEL-----DTMKQLGNREYLLSSEEKCAVLLSLVNILYAYCYD 283
Y +D + + +RT + P E + M L + YL+ K +LL+ + +L+AY +D
Sbjct: 261 YKADKQLPEAERTSIMPVEFSKEEQEKMMNLPRKSYLIDDSYKPEILLTTICLLFAYHFD 320
Query: 284 VRTTMGEHTVESGWTVNKLSSALCWLQS-------FTSLKQVLISSMRRSLCYPLYREWR 336
+R G+H +ES WT+ K+ +L S + L+ +I+ +RR+L YP +R +
Sbjct: 321 LRENEGDHNIESAWTIGKIVPQFSFLDSKIVIENNYNVLRAAIITCIRRALTYPYHRNFD 380
Query: 337 LSCAIQQDV 345
+ + DV
Sbjct: 381 MITKVWDDV 389
>SGD|S000001366 [details] [associations]
symbol:SHQ1 "Chaperone protein required for the assembly of
box H/ACA snoRNP" species:4932 "Saccharomyces cerevisiae"
[GO:0005634 "nucleus" evidence=IEA] [GO:0051082 "unfolded protein
binding" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=IDA]
[GO:0000493 "box H/ACA snoRNP assembly" evidence=IMP;IPI]
SGD:S000001366 GO:GO:0005654 EMBL:Z38125 EMBL:BK006942
GO:GO:0051082 InterPro:IPR008978 SUPFAM:SSF49764 InterPro:IPR007052
PROSITE:PS51203 PDB:3UAI PDB:3ZV0 PDBsum:3UAI PDBsum:3ZV0
RefSeq:NP_012168.3 GeneID:854709 KEGG:sce:YIL098C GO:GO:0000493
RefSeq:NP_012162.3 GeneID:854702 KEGG:sce:YIL104C KO:K14764
eggNOG:NOG287505 GeneTree:ENSGT00390000007605 InterPro:IPR007009
Pfam:PF04925 OrthoDB:EOG41RT3K PIR:S48468 PDB:2K8Q PDB:3EUD
PDB:3UAH PDB:3ZUZ PDBsum:2K8Q PDBsum:3EUD PDBsum:3UAH PDBsum:3ZUZ
ProteinModelPortal:P40486 SMR:P40486 DIP:DIP-4970N IntAct:P40486
MINT:MINT-479871 STRING:P40486 PaxDb:P40486 PeptideAtlas:P40486
EnsemblFungi:YIL104C CYGD:YIL104c HOGENOM:HOG000248098 OMA:CTTREER
EvolutionaryTrace:P40486 NextBio:977352 Genevestigator:P40486
GermOnline:YIL104C Uniprot:P40486
Length = 507
Score = 155 (59.6 bits), Expect = 2.2e-15, Sum P(3) = 2.2e-15
Identities = 37/99 (37%), Positives = 54/99 (54%)
Query: 1 MLTPMFELLQSEEDVTIIIKAPYANI----ADTEVYVEDTDFRFSSSPYYLRLNFPGPIK 56
M+TP F + Q EE I +K +NI E+ +++ F SPYYLRL FP +
Sbjct: 1 MITPRFSITQDEE--FIFLKIFISNIRFSAVGLEIIIQENMIIFHLSPYYLRLRFPHELI 58
Query: 57 ETDHTSGKYDSDKGQFTFTVIKVNTGEHFPDLDLISKLL 95
+ + ++ +YDS V K+N E+F DLDL +KLL
Sbjct: 59 DDERSTAQYDSKDECINVKVAKLNKNEYFEDLDLPTKLL 97
Score = 92 (37.4 bits), Expect = 2.2e-15, Sum P(3) = 2.2e-15
Identities = 23/78 (29%), Positives = 42/78 (53%)
Query: 242 QMTPSELDTMKQ-LGNREYLLSSEEKCAVLLSLVNILYAYCYDVRTTMGEHTVESGWTVN 300
+ T E M+ L + YL+ E+ + ++++++L++Y ++ G HT ES WT+
Sbjct: 272 EFTDEEQKQMQDNLPKKSYLV--EDIKPLYVTILSVLFSYVFEQIENEGTHTTESAWTMG 329
Query: 301 KLSSALCWLQSFTSLKQV 318
KL + +L LKQV
Sbjct: 330 KLCPQISFLDQ--QLKQV 345
Score = 56 (24.8 bits), Expect = 2.2e-15, Sum P(3) = 2.2e-15
Identities = 10/24 (41%), Positives = 18/24 (75%)
Query: 315 LKQVLISSMRRSLCYPLYREWRLS 338
+K +I+ +RR+L YPL+R + L+
Sbjct: 365 IKIAIITGIRRALSYPLHRNYDLA 388
>FB|FBgn0037482 [details] [associations]
symbol:CG10055 species:7227 "Drosophila melanogaster"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] EMBL:AE014297 KO:K14764 eggNOG:NOG287505
GeneTree:ENSGT00390000007605 GO:GO:0022618 InterPro:IPR007009
Pfam:PF04925 EMBL:AY118875 RefSeq:NP_649703.1 UniGene:Dm.13666
ProteinModelPortal:Q9VI74 MINT:MINT-1714503 PRIDE:Q9VI74
EnsemblMetazoa:FBtr0081605 GeneID:40862 KEGG:dme:Dmel_CG10055
UCSC:CG10055-RA FlyBase:FBgn0037482 InParanoid:Q9VI74 OMA:GQEDETT
OrthoDB:EOG4CC2GN PhylomeDB:Q9VI74 GenomeRNAi:40862 NextBio:821015
Bgee:Q9VI74 Uniprot:Q9VI74
Length = 608
Score = 170 (64.9 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 33/77 (42%), Positives = 47/77 (61%)
Query: 273 LVNILYAYCYDVRTTMGEHTVESGWTVNKLSSALCWLQSFTSLKQVLISSMRRSLCYPLY 332
L++IL A CYDVRTT E T ESGWT + L C+ + F + + VL++ +RR + YPLY
Sbjct: 319 LISILLAICYDVRTTNNEPTCESGWTRSILCPLYCYFEQFDNYRDVLVAFLRRMITYPLY 378
Query: 333 REWRLSCAIQQDVNTIL 349
R + L +D +L
Sbjct: 379 RNFELGRQCVRDAIEVL 395
Score = 39 (18.8 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 6/16 (37%), Positives = 11/16 (68%)
Query: 144 STTYGYGFANKTKGTL 159
+ +GYG+A++ G L
Sbjct: 202 TNNFGYGYASEYSGPL 217
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.133 0.393 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 407 361 0.00082 117 3 11 22 0.40 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 15
No. of states in DFA: 617 (66 KB)
Total size of DFA: 245 KB (2132 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 25.90u 0.09s 25.99t Elapsed: 00:00:07
Total cpu time: 25.90u 0.09s 25.99t Elapsed: 00:00:08
Start: Thu Aug 15 15:04:57 2013 End: Thu Aug 15 15:05:05 2013