BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5046
(94 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q4R4Q3|NDRG1_MACFA Protein NDRG1 OS=Macaca fascicularis GN=Ndrg1 PE=2 SV=1
Length = 394
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 5 LVDGRRSYFEQCVNPINLALFIDAYIRRTDLNISRDLENRTCTQTLGMPVMNITGAFSPH 64
+V R + +NP NL LFI+AY R DL I R + T T TL P + + G SP
Sbjct: 207 VVHTYRQHIVNDMNPGNLHLFINAYNSRRDLEIERPMPG-THTVTLQCPALLVVGDSSPA 265
Query: 65 VDDTVILNSRLDPTSSSWMKSCSC 88
VD V NS+LDPT ++ +K C
Sbjct: 266 VDAVVECNSKLDPTKTTLLKMADC 289
>sp|Q92597|NDRG1_HUMAN Protein NDRG1 OS=Homo sapiens GN=NDRG1 PE=1 SV=1
Length = 394
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 5 LVDGRRSYFEQCVNPINLALFIDAYIRRTDLNISRDLENRTCTQTLGMPVMNITGAFSPH 64
+V R + +NP NL LFI+AY R DL I R + T T TL P + + G SP
Sbjct: 207 VVHTYRQHIVNDMNPGNLHLFINAYNSRRDLEIERPMPG-THTVTLQCPALLVVGDSSPA 265
Query: 65 VDDTVILNSRLDPTSSSWMKSCSC 88
VD V NS+LDPT ++ +K C
Sbjct: 266 VDAVVECNSKLDPTKTTLLKMADC 289
>sp|Q6DFS4|NDRG3_XENTR Protein NDRG3 OS=Xenopus tropicalis GN=ndrg3 PE=2 SV=1
Length = 387
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 5 LVDGRRSYFEQCVNPINLALFIDAYIRRTDLNISRDL-ENRTCTQTLGMPVMNITGAFSP 63
LV R + Q +N NL LF+ +Y R DL I R + + T T T+ PV+ + G SP
Sbjct: 205 LVQTYRLHIAQDINQDNLQLFVTSYNSRKDLEIERPIFGSSTPTNTIKCPVLLVVGDSSP 264
Query: 64 HVDDTVILNSRLDPTSSSWMKSCSC 88
VD V NSRLDPT ++ +K C
Sbjct: 265 AVDAVVECNSRLDPTRTTLLKMADC 289
>sp|Q6JE36|NDRG1_RAT Protein NDRG1 OS=Rattus norvegicus GN=Ndrg1 PE=1 SV=1
Length = 394
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 5 LVDGRRSYFEQCVNPINLALFIDAYIRRTDLNISRDLENRTCTQTLGMPVMNITGAFSPH 64
+V R + +NP NL LFI AY R DL I R + T T TL P + + G SP
Sbjct: 207 VVHTYRQHILNDMNPSNLHLFISAYNSRRDLEIERPMPG-THTVTLQCPALLVVGDNSPA 265
Query: 65 VDDTVILNSRLDPTSSSWMKSCSC 88
VD V NS+LDPT ++ +K C
Sbjct: 266 VDAVVECNSKLDPTKTTLLKMADC 289
>sp|Q62433|NDRG1_MOUSE Protein NDRG1 OS=Mus musculus GN=Ndrg1 PE=1 SV=1
Length = 394
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 5 LVDGRRSYFEQCVNPINLALFIDAYIRRTDLNISRDLENRTCTQTLGMPVMNITGAFSPH 64
+V R + +NP NL LFI AY R DL I R + T T TL P + + G SP
Sbjct: 207 VVHTYRQHILNDMNPSNLHLFISAYNSRRDLEIERPMPG-THTVTLQCPALLVVGDNSPA 265
Query: 65 VDDTVILNSRLDPTSSSWMKSCSC 88
VD V NS+LDPT ++ +K C
Sbjct: 266 VDAVVECNSKLDPTKTTLLKMADC 289
>sp|Q3SYX0|NDRG1_BOVIN Protein NDRG1 OS=Bos taurus GN=NDRG1 PE=2 SV=1
Length = 384
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 5 LVDGRRSYFEQCVNPINLALFIDAYIRRTDLNISRDLENRTCTQTLGMPVMNITGAFSPH 64
+V R + +NP NL LFI+AY R DL I R + T TL P + + G SP
Sbjct: 207 VVHAYRHHVMNDMNPGNLQLFINAYNGRRDLEIERPMPG-AHTVTLQCPALLVVGDSSPA 265
Query: 65 VDDTVILNSRLDPTSSSWMKSCSC 88
VD V NS+LDPT ++ +K C
Sbjct: 266 VDAVVECNSKLDPTKTTLLKMADC 289
>sp|Q7ZWV3|NDR1B_XENLA Protein NDRG1-B OS=Xenopus laevis GN=ndrg1-b PE=2 SV=1
Length = 396
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 3 PHLVDGRRSYFEQCVNPINLALFIDAYIRRTDLNISRDLENRTCTQTLGMPVMNITGAFS 62
P LV+ R + +N NL LF+ +Y R DL I R + + T TL P + + G S
Sbjct: 206 PELVETYRQHILHDINQNNLQLFVKSYNSRRDLEIERPIPG-SNTVTLKCPSLLVVGDSS 264
Query: 63 PHVDDTVILNSRLDPTSSSWMKSCSC 88
P VD V NS+LDPT ++ +K C
Sbjct: 265 PAVDAVVECNSKLDPTKTTLLKMSDC 290
>sp|Q66IG4|NDRG1_XENTR Protein NDRG1 OS=Xenopus tropicalis GN=ndrg1 PE=2 SV=1
Length = 395
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 5 LVDGRRSYFEQCVNPINLALFIDAYIRRTDLNISRDLENRTCTQTLGMPVMNITGAFSPH 64
LV+ R + Q +N NL LF+ +Y R DL I R + T TL P + + G SP
Sbjct: 207 LVETYRQHIVQDINQNNLQLFVKSYNSRRDLEIERPFPG-SNTVTLKCPALLVVGDSSPA 265
Query: 65 VDDTVILNSRLDPTSSSWMKSCSC 88
VD V NS+LDPT ++ +K C
Sbjct: 266 VDAVVDCNSKLDPTKTTLLKMSDC 289
>sp|Q6GQL1|NDRG3_XENLA Protein NDRG3 OS=Xenopus laevis GN=ndrg3 PE=2 SV=1
Length = 375
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Query: 5 LVDGRRSYFEQCVNPINLALFIDAYIRRTDLNISRDLENRTC--TQTLGMPVMNITGAFS 62
LV R + Q +N NL LF+++Y R DL I R + + T+ PV+ + G S
Sbjct: 205 LVQTFRLHIAQDINQDNLELFVNSYNSRKDLEIERPVFGSSTPTNTTIKCPVLLVVGDNS 264
Query: 63 PHVDDTVILNSRLDPTSSSWMKSCSC 88
P VD V NSRLDPT ++ +K C
Sbjct: 265 PAVDAVVECNSRLDPTRTTLLKMADC 290
>sp|Q641F2|NDR1A_XENLA Protein NDRG1-A OS=Xenopus laevis GN=ndrg1-a PE=2 SV=1
Length = 396
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 3 PHLVDGRRSYFEQCVNPINLALFIDAYIRRTDLNISRDLENRTCTQTLGMPVMNITGAFS 62
P LV+ R + +N N+ F+ +Y R DL I R + T TL P + + G S
Sbjct: 206 PELVETYRQHILHDINQNNVQHFVKSYNSRRDLEIERPIPG-TNAVTLKCPALLVVGDSS 264
Query: 63 PHVDDTVILNSRLDPTSSSWMKSCSC 88
P VD V NS+LDPT ++ +K C
Sbjct: 265 PAVDAVVECNSKLDPTKTTLLKMSDC 290
>sp|Q6DJD3|NDR4B_XENLA Protein NDRG4-B OS=Xenopus laevis GN=ndrg4-b PE=2 SV=1
Length = 367
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 4 HLVDGRRSYFEQCVNPINLALFIDAYIRRTDLNISRDLENRTCTQTLGMPVMNITGAFSP 63
LV R CVN NL LF + Y R DL +SR +TL PVM + G +P
Sbjct: 208 ELVQNYRQQISSCVNQSNLQLFWNMYNSRRDLEMSRP-GTVPNAKTLRAPVMLVVGDNAP 266
Query: 64 HVDDTVILNSRLDPTSSSWMK 84
D V NS+LDPT+++++K
Sbjct: 267 AEDSVVECNSKLDPTNTTFLK 287
>sp|Q8VBU2|NDRG2_RAT Protein NDRG2 OS=Rattus norvegicus GN=Ndrg2 PE=1 SV=1
Length = 371
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 4 HLVDGRRSYFEQCVNPINLALFIDAYIRRTDLNISRDLENRTCTQTLGMPVMNITGAFSP 63
L+ RS N N+ L+ ++Y R DLN R E TL PVM + G +P
Sbjct: 212 ELIQKYRSLITHAPNLENIELYWNSYNNRRDLNFERGGE-----MTLKCPVMLVVGDQAP 266
Query: 64 HVDDTVILNSRLDPTSSSWMK 84
H D V NS+LDPT +S++K
Sbjct: 267 HEDAVVECNSKLDPTQTSFLK 287
>sp|Q9QYG0|NDRG2_MOUSE Protein NDRG2 OS=Mus musculus GN=Ndrg2 PE=1 SV=1
Length = 371
Score = 52.4 bits (124), Expect = 8e-07, Method: Composition-based stats.
Identities = 30/80 (37%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Query: 5 LVDGRRSYFEQCVNPINLALFIDAYIRRTDLNISRDLENRTCTQTLGMPVMNITGAFSPH 64
L+ R + N N+ L+ ++Y R DLN R E TL PVM + G +PH
Sbjct: 213 LIQKYRGIIQHAPNLENIELYWNSYNNRRDLNFERGGET-----TLKCPVMLVVGDQAPH 267
Query: 65 VDDTVILNSRLDPTSSSWMK 84
D V NS+LDPT +S++K
Sbjct: 268 EDAVVECNSKLDPTQTSFLK 287
>sp|Q5RA95|NDRG3_PONAB Protein NDRG3 OS=Pongo abelii GN=NDRG3 PE=2 SV=1
Length = 375
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 3 PHLVDGRRSYFEQCVNPINLALFIDAYIRRTDLNISRDL--ENRTCTQTLGMPVMNITGA 60
P L+ R + Q +N NL LF+++Y R DL I R + +N ++TL + + G
Sbjct: 203 PDLIQTYRMHIAQDINQDNLQLFLNSYNGRRDLEIERPILGQNDNKSKTLKCSTLLVVGD 262
Query: 61 FSPHVDDTVILNSRLDPTSSSWMKSCSC 88
SP V+ V NSRL+P +++ +K C
Sbjct: 263 NSPAVEAVVECNSRLNPINTTLLKMADC 290
>sp|Q6DIX1|NDRG4_XENTR Protein NDRG4 OS=Xenopus tropicalis GN=ndrg4 PE=2 SV=1
Length = 405
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 4 HLVDGRRSYFEQCVNPINLALFIDAYIRRTDLNISRDLENRTCTQTLGMPVMNITGAFSP 63
LV R CVN NL LF + Y R DL +SR +TL PVM + G +P
Sbjct: 231 ELVQNYRQQISSCVNQSNLQLFWNMYNSRRDLEMSRP-GTVPNAKTLRAPVMLVVGDNAP 289
Query: 64 HVDDTVILNSRLDPTSSSWMK 84
D V NS+LDPT+++++K
Sbjct: 290 AEDCVVECNSKLDPTNTTFLK 310
>sp|Q9ULP0|NDRG4_HUMAN Protein NDRG4 OS=Homo sapiens GN=NDRG4 PE=1 SV=2
Length = 352
Score = 50.8 bits (120), Expect = 3e-06, Method: Composition-based stats.
Identities = 32/82 (39%), Positives = 45/82 (54%), Gaps = 5/82 (6%)
Query: 5 LVDGRRSYFEQCVNPINLALFIDAYIRRTDLNISR--DLENRTCTQTLGMPVMNITGAFS 62
LV R VN NL LF + Y R DL+I+R + N +TL PVM + G +
Sbjct: 181 LVQSYRQQIGNVVNQANLQLFWNMYNSRRDLDINRPGTVPN---AKTLRCPVMLVVGDNA 237
Query: 63 PHVDDTVILNSRLDPTSSSWMK 84
P D V NS+LDPT+++++K
Sbjct: 238 PAEDGVVECNSKLDPTTTTFLK 259
>sp|A7MB28|NDRG3_BOVIN Protein NDRG3 OS=Bos taurus GN=NDRG3 PE=2 SV=1
Length = 375
Score = 50.4 bits (119), Expect = 3e-06, Method: Composition-based stats.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Query: 5 LVDGRRSYFEQCVNPINLALFIDAYIRRTDLNISRDL--ENRTCTQTLGMPVMNITGAFS 62
L+ R + Q +N NL LF+ +Y R DL I R + +N ++TL + + G S
Sbjct: 205 LIQTYRLHIAQDINQENLQLFLGSYNGRKDLEIERPILGQNDNKSKTLKCSTLLVVGDSS 264
Query: 63 PHVDDTVILNSRLDPTSSSWMKSCSC 88
P V+ V NSRL+P +++ +K C
Sbjct: 265 PAVEAVVECNSRLNPVNTTLLKMADC 290
>sp|Q640Z1|NDR4A_XENLA Protein NDRG4-A OS=Xenopus laevis GN=ndrg4-a PE=2 SV=1
Length = 390
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 4 HLVDGRRSYFEQCVNPINLALFIDAYIRRTDLNISRDLENRTCTQTLGMPVMNITGAFSP 63
LV R CVN NL LF + Y R DL +SR +TL PVM + G +P
Sbjct: 231 ELVQNYRQQISNCVNQSNLQLFWNMYNSRRDLEMSRP-GTAPNAKTLRAPVMLVVGDNAP 289
Query: 64 HVDDTVILNSRLDPTSSSWMK 84
+ V NS+LDPT+++++K
Sbjct: 290 AEECVVECNSKLDPTNTTFLK 310
>sp|Q9UGV2|NDRG3_HUMAN Protein NDRG3 OS=Homo sapiens GN=NDRG3 PE=1 SV=2
Length = 375
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Query: 5 LVDGRRSYFEQCVNPINLALFIDAYIRRTDLNISRDL--ENRTCTQTLGMPVMNITGAFS 62
L+ R + Q +N NL LF+++Y R DL I R + +N ++TL + + G S
Sbjct: 205 LIQTYRMHIAQDINQDNLQLFLNSYNGRRDLEIERPILGQNDNKSKTLKCSTLLVVGDNS 264
Query: 63 PHVDDTVILNSRLDPTSSSWMKSCSC 88
P V+ V NSRL+P +++ +K C
Sbjct: 265 PAVEAVVECNSRLNPINTTLLKMADC 290
>sp|Q6AYR2|NDRG3_RAT Protein NDRG3 OS=Rattus norvegicus GN=Ndrg3 PE=2 SV=1
Length = 375
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Query: 5 LVDGRRSYFEQCVNPINLALFIDAYIRRTDLNISRDL--ENRTCTQTLGMPVMNITGAFS 62
L+ R + Q +N NL LF+ +Y R DL I R + +N +TL + + G S
Sbjct: 205 LIQTYRLHIAQDINQENLQLFLGSYNGRRDLEIERPILGQNDNRLKTLKCSTLLVVGDNS 264
Query: 63 PHVDDTVILNSRLDPTSSSWMKSCSC 88
P V+ V NSRLDP +++ +K C
Sbjct: 265 PAVEAVVECNSRLDPINTTLLKMADC 290
>sp|Q9Z2L9|NDRG4_RAT Protein NDRG4 OS=Rattus norvegicus GN=Ndrg4 PE=2 SV=1
Length = 352
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 5 LVDGRRSYFEQCVNPINLALFIDAYIRRTDLNISRDLENRTCTQTLGMPVMNITGAFSPH 64
LV R VN NL LF + Y R DL+I+R +TL PVM + G +P
Sbjct: 181 LVQSYRQQISSVVNQANLQLFWNMYNSRRDLDINRP-GTVPNAKTLRCPVMLVVGDNAPA 239
Query: 65 VDDTVILNSRLDPTSSSWMK 84
D V NS+LDPT+++++K
Sbjct: 240 EDGVVECNSKLDPTTTTFLK 259
>sp|Q9QYF9|NDRG3_MOUSE Protein NDRG3 OS=Mus musculus GN=Ndrg3 PE=1 SV=1
Length = 375
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Query: 5 LVDGRRSYFEQCVNPINLALFIDAYIRRTDLNISRDL--ENRTCTQTLGMPVMNITGAFS 62
L+ R + Q +N NL LF+ +Y R DL I R + +N +TL + + G S
Sbjct: 205 LIQTYRLHIAQDINQENLQLFLGSYNGRRDLEIERPILGQNDNRLKTLKCSTLLVVGDNS 264
Query: 63 PHVDDTVILNSRLDPTSSSWMKSCSC 88
P V+ V NSRLDP +++ +K C
Sbjct: 265 PAVEAVVECNSRLDPINTTLLKMADC 290
>sp|Q8BTG7|NDRG4_MOUSE Protein NDRG4 OS=Mus musculus GN=Ndrg4 PE=1 SV=1
Length = 352
Score = 49.7 bits (117), Expect = 6e-06, Method: Composition-based stats.
Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 5/82 (6%)
Query: 5 LVDGRRSYFEQCVNPINLALFIDAYIRRTDLNISR--DLENRTCTQTLGMPVMNITGAFS 62
LV R VN NL LF + Y R DL+I+R + N +TL PVM + G +
Sbjct: 181 LVQSYRQQISNVVNQANLQLFWNMYNSRRDLDINRPGTVPN---AKTLRCPVMLVVGDNA 237
Query: 63 PHVDDTVILNSRLDPTSSSWMK 84
P + V NS+LDPT+++++K
Sbjct: 238 PAEEGVVECNSKLDPTTTTFLK 259
>sp|Q3ZBA8|NDRG2_BOVIN Protein NDRG2 OS=Bos taurus GN=NDRG2 PE=2 SV=1
Length = 357
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 4 HLVDGRRSYFEQCVNPINLALFIDAYIRRTDLNISRDLENRTCTQTLGMPVMNITGAFSP 63
L+ R+ N N+ L+ ++Y R DLN R + TL PVM + G +P
Sbjct: 198 ELIQKYRNIIAHAPNLDNIELYWNSYNNRRDLNFVRGGDT-----TLKCPVMLVVGDQAP 252
Query: 64 HVDDTVILNSRLDPTSSSWMK 84
H D V NS+LDPT +S++K
Sbjct: 253 HEDAVVECNSKLDPTQTSFLK 273
>sp|Q5PR98|NDRG2_DANRE Protein NDRG2 OS=Danio rerio GN=ndrg2 PE=2 SV=1
Length = 368
Score = 48.9 bits (115), Expect = 9e-06, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 7/80 (8%)
Query: 5 LVDGRRSYFEQCVNPINLALFIDAYIRRTDLNISRDLENRTCTQTLGMPVMNITGAFSPH 64
L+ R + N +N+ LF +Y+ R DL++ R+ T PVM + G +P+
Sbjct: 213 LIQTHRERITKAPNLLNIELFWKSYLGRRDLSLDRN-------NTFKCPVMLVVGDQAPY 265
Query: 65 VDDTVILNSRLDPTSSSWMK 84
+ V NS+LDPT++S++K
Sbjct: 266 EEAAVECNSKLDPTTTSFLK 285
>sp|A5A6K6|NDRG2_PANTR Protein NDRG2 OS=Pan troglodytes GN=NDRG2 PE=2 SV=1
Length = 357
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 4 HLVDGRRSYFEQCVNPINLALFIDAYIRRTDLNISRDLENRTCTQTLGMPVMNITGAFSP 63
L+ R+ N N+ L+ ++Y R DLN R + TL PVM + G +P
Sbjct: 198 ELIQKYRNIITHAPNLDNIELYWNSYNNRRDLNFERGGD-----ITLKCPVMLVVGDQAP 252
Query: 64 HVDDTVILNSRLDPTSSSWMK 84
H D V NS+LDPT +S++K
Sbjct: 253 HEDAVVECNSKLDPTQTSFLK 273
>sp|Q5RBN6|NDRG2_PONAB Protein NDRG2 OS=Pongo abelii GN=NDRG2 PE=2 SV=2
Length = 371
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 4 HLVDGRRSYFEQCVNPINLALFIDAYIRRTDLNISRDLENRTCTQTLGMPVMNITGAFSP 63
L+ R+ N N+ L+ ++Y R DLN R + TL PVM + G +P
Sbjct: 212 ELIQKYRNIITHAPNLDNIELYWNSYNNRRDLNFERGGDI-----TLKCPVMLVVGDQAP 266
Query: 64 HVDDTVILNSRLDPTSSSWMK 84
H D V NS+LDPT +S++K
Sbjct: 267 HEDAVVECNSKLDPTQTSFLK 287
>sp|Q9UN36|NDRG2_HUMAN Protein NDRG2 OS=Homo sapiens GN=NDRG2 PE=1 SV=2
Length = 371
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 4 HLVDGRRSYFEQCVNPINLALFIDAYIRRTDLNISRDLENRTCTQTLGMPVMNITGAFSP 63
L+ R+ N N+ L+ ++Y R DLN R + TL PVM + G +P
Sbjct: 212 ELIQKYRNIITHAPNLDNIELYWNSYNNRRDLNFERGGDI-----TLRCPVMLVVGDQAP 266
Query: 64 HVDDTVILNSRLDPTSSSWMK 84
H D V NS+LDPT +S++K
Sbjct: 267 HEDAVVECNSKLDPTQTSFLK 287
>sp|Q4R4K0|NDRG2_MACFA Protein NDRG2 OS=Macaca fascicularis GN=NDRG2 PE=2 SV=1
Length = 357
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query: 4 HLVDGRRSYFEQCVNPINLALFIDAYIRRTDLNISRDLENRTCTQTLGMPVMNITGAFSP 63
L+ R+ N N+ L+ ++Y R DLN R + TL PVM + G +P
Sbjct: 198 ELIQKYRNIITHAPNLDNIELYWNSYNNRRDLNFERGGD-----ITLKCPVMLVVGDQAP 252
Query: 64 HVDDTVILNSRLDPTSSSWMK 84
H D V NS+LDPT +S +K
Sbjct: 253 HEDAVVECNSKLDPTQTSSLK 273
>sp|Q66KM2|NDRG2_XENTR Protein NDRG2 OS=Xenopus tropicalis GN=ndrg2 PE=2 SV=1
Length = 360
Score = 46.2 bits (108), Expect = 6e-05, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
Query: 21 NLALFIDAYIRRTDLNISRDLENRTCTQTLGMPVMNITGAFSPHVDDTVILNSRLDPTSS 80
N L+ ++Y R DLN+ R TL PVM + G +PH D V NS+LDPT +
Sbjct: 225 NYQLYWNSYNSRRDLNLERG-----GGVTLKCPVMLVVGDQAPHEDAVVECNSKLDPTQT 279
Query: 81 SWMK 84
S++K
Sbjct: 280 SFLK 283
>sp|Q7ZY73|NDRG2_XENLA Protein NDRG2 OS=Xenopus laevis GN=ndrg2 PE=2 SV=1
Length = 360
Score = 45.4 bits (106), Expect = 9e-05, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 5/64 (7%)
Query: 21 NLALFIDAYIRRTDLNISRDLENRTCTQTLGMPVMNITGAFSPHVDDTVILNSRLDPTSS 80
N L+ ++Y R DLN R TL PVM + G +PH D V NS+LDPT +
Sbjct: 225 NYQLYWNSYNSRRDLNFERG-----GGVTLKCPVMLVVGDQAPHEDAVVECNSKLDPTQT 279
Query: 81 SWMK 84
S++K
Sbjct: 280 SFLK 283
>sp|Q86Y56|HEAT2_HUMAN HEAT repeat-containing protein 2 OS=Homo sapiens GN=HEATR2 PE=1
SV=4
Length = 855
Score = 32.7 bits (73), Expect = 0.73, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Query: 48 QTLGMPVMNITGAFSPHVDDTV--ILNSRLDPTSSSWMKSCSCVSS 91
Q LG+ V A +PH+DD + + S LDP ++ +SCSC ++
Sbjct: 147 QLLGLAVDLCGAALAPHLDDALRALRCSLLDPFAAVRRESCSCAAA 192
>sp|Q5R664|COPB2_PONAB Coatomer subunit beta' OS=Pongo abelii GN=COPB2 PE=2 SV=1
Length = 906
Score = 29.6 bits (65), Expect = 5.1, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 40 DLENRTCTQTLGMPVMNITGAFSPHVDDTVILNSRLDPTSSSWMKSCSCVSSSL 93
D +N+TC QTL N++ A S H + +I+ D T W S + S+L
Sbjct: 215 DYQNKTCVQTLEGHAQNVSCA-SFHPELPIIITGSEDGTVRIWHSSTYRLESTL 267
>sp|O55029|COPB2_MOUSE Coatomer subunit beta' OS=Mus musculus GN=Copb2 PE=2 SV=2
Length = 905
Score = 29.6 bits (65), Expect = 5.1, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 40 DLENRTCTQTLGMPVMNITGAFSPHVDDTVILNSRLDPTSSSWMKSCSCVSSSL 93
D +N+TC QTL N++ A S H + +I+ D T W S + S+L
Sbjct: 215 DYQNKTCVQTLEGHAQNVSCA-SFHPELPIIITGSEDGTVRIWHSSTYRLESTL 267
>sp|Q4R4I8|COPB2_MACFA Coatomer subunit beta' OS=Macaca fascicularis GN=COPB2 PE=2 SV=1
Length = 906
Score = 29.6 bits (65), Expect = 5.1, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 40 DLENRTCTQTLGMPVMNITGAFSPHVDDTVILNSRLDPTSSSWMKSCSCVSSSL 93
D +N+TC QTL N++ A S H + +I+ D T W S + S+L
Sbjct: 215 DYQNKTCVQTLEGHAQNVSCA-SFHPELPIIITGSEDGTVRIWHSSTYRLESTL 267
>sp|P35606|COPB2_HUMAN Coatomer subunit beta' OS=Homo sapiens GN=COPB2 PE=1 SV=2
Length = 906
Score = 29.6 bits (65), Expect = 5.1, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 40 DLENRTCTQTLGMPVMNITGAFSPHVDDTVILNSRLDPTSSSWMKSCSCVSSSL 93
D +N+TC QTL N++ A S H + +I+ D T W S + S+L
Sbjct: 215 DYQNKTCVQTLEGHAQNVSCA-SFHPELPIIITGSEDGTVRIWHSSTYRLESTL 267
>sp|P35605|COPB2_BOVIN Coatomer subunit beta' OS=Bos taurus GN=COPB2 PE=1 SV=3
Length = 906
Score = 29.6 bits (65), Expect = 5.1, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 40 DLENRTCTQTLGMPVMNITGAFSPHVDDTVILNSRLDPTSSSWMKSCSCVSSSL 93
D +N+TC QTL N++ A S H + +I+ D T W S + S+L
Sbjct: 215 DYQNKTCVQTLEGHAQNVSCA-SFHPELPIIITGSEDGTVRIWHSSTYRLESTL 267
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.133 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,867,498
Number of Sequences: 539616
Number of extensions: 1085303
Number of successful extensions: 2313
Number of sequences better than 100.0: 37
Number of HSP's better than 100.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 2275
Number of HSP's gapped (non-prelim): 37
length of query: 94
length of database: 191,569,459
effective HSP length: 64
effective length of query: 30
effective length of database: 157,034,035
effective search space: 4711021050
effective search space used: 4711021050
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)