Query psy5048
Match_columns 319
No_of_seqs 297 out of 1597
Neff 7.2
Searched_HMMs 29240
Date Sat Aug 17 00:24:10 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5048.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/5048hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2if4_A ATFKBP42; FKBP-like, al 100.0 9.7E-35 3.3E-39 274.8 18.4 268 28-304 44-337 (338)
2 1kt0_A FKBP51, 51 kDa FK506-bi 100.0 4.7E-31 1.6E-35 259.3 23.3 277 7-302 111-422 (457)
3 1p5q_A FKBP52, FK506-binding p 100.0 1.6E-27 5.6E-32 224.8 19.0 255 31-300 23-299 (336)
4 2f4e_A ATFKBP42; FKBP-like, al 99.9 3.3E-24 1.1E-28 186.6 15.0 131 27-158 43-179 (180)
5 3jxv_A 70 kDa peptidyl-prolyl 99.9 3E-24 1E-28 205.5 15.6 134 7-141 203-355 (356)
6 1yat_A FK506 binding protein; 99.9 6.7E-23 2.3E-27 164.9 14.2 109 31-140 4-113 (113)
7 2lkn_A AH receptor-interacting 99.9 3.2E-24 1.1E-28 183.6 6.4 111 32-143 9-160 (165)
8 2ppn_A FK506-binding protein 1 99.9 4.5E-23 1.5E-27 164.2 12.1 105 35-140 2-107 (107)
9 3o5e_A Peptidyl-prolyl CIS-tra 99.9 6.3E-23 2.1E-27 172.3 13.0 108 33-141 35-143 (144)
10 3kz7_A FK506-binding protein 3 99.9 8.3E-23 2.8E-27 165.7 12.5 108 32-140 3-119 (119)
11 2y78_A Peptidyl-prolyl CIS-tra 99.9 1.1E-22 3.9E-27 168.6 13.3 110 29-139 24-133 (133)
12 3o5q_A Peptidyl-prolyl CIS-tra 99.9 8.7E-23 3E-27 168.0 12.4 107 34-141 20-127 (128)
13 1jvw_A Macrophage infectivity 99.9 5.7E-23 2E-27 176.6 11.5 123 29-157 33-156 (167)
14 1q1c_A FK506-binding protein 4 99.9 1.7E-22 5.9E-27 187.3 14.1 129 7-147 131-279 (280)
15 2lgo_A FKBP; infectious diseas 99.9 1.4E-22 4.8E-27 167.3 12.0 100 39-139 30-130 (130)
16 3uf8_A Ubiquitin-like protein 99.9 4E-22 1.4E-26 177.4 13.7 115 24-139 95-209 (209)
17 1r9h_A FKB-6, FK506 binding pr 99.9 3.8E-22 1.3E-26 165.8 12.5 108 33-141 14-122 (135)
18 4dip_A Peptidyl-prolyl CIS-tra 99.9 5E-22 1.7E-26 162.7 12.8 109 32-142 11-124 (125)
19 2vn1_A 70 kDa peptidylprolyl i 99.9 7.3E-22 2.5E-26 162.6 13.3 106 35-141 18-127 (129)
20 3b7x_A FK506-binding protein 6 99.9 1.8E-22 6E-27 167.5 9.4 109 31-140 24-133 (134)
21 3jxv_A 70 kDa peptidyl-prolyl 99.9 3.1E-22 1.1E-26 191.5 12.3 127 7-142 91-237 (356)
22 2jwx_A FKBP38NTD, FK506-bindin 99.9 1.4E-21 4.8E-26 166.3 13.8 108 30-142 39-150 (157)
23 3oe2_A Peptidyl-prolyl CIS-tra 99.9 1.5E-21 5.1E-26 174.3 13.2 106 29-140 113-218 (219)
24 1kt0_A FKBP51, 51 kDa FK506-bi 99.9 3.6E-21 1.2E-25 188.8 17.0 110 32-142 30-140 (457)
25 1fd9_A Protein (macrophage inf 99.9 2.7E-21 9.1E-26 172.3 13.3 110 29-141 102-211 (213)
26 2pbc_A FK506-binding protein 2 99.9 1.8E-21 6.3E-26 153.6 10.6 97 45-142 3-99 (102)
27 1u79_A FKBP-type peptidyl-prol 99.9 1.2E-21 3.9E-26 161.5 9.2 111 28-139 7-128 (129)
28 2awg_A 38 kDa FK-506 binding p 99.9 6.1E-21 2.1E-25 154.7 13.0 107 29-140 8-117 (118)
29 1q6h_A FKBP-type peptidyl-prol 99.8 5.9E-21 2E-25 171.3 13.6 107 30-140 118-224 (224)
30 2d9f_A FK506-binding protein 8 99.8 1.3E-20 4.3E-25 156.5 12.2 110 29-143 12-125 (135)
31 1q1c_A FK506-binding protein 4 99.8 6.5E-20 2.2E-24 170.0 13.5 130 33-168 51-181 (280)
32 1hxv_A Trigger factor; FKBP fo 99.6 5.8E-16 2E-20 124.6 7.4 87 45-140 27-113 (113)
33 4dt4_A FKBP-type 16 kDa peptid 99.6 8.2E-16 2.8E-20 132.0 8.3 72 47-119 24-95 (169)
34 3pr9_A FKBP-type peptidyl-prol 99.6 3.3E-15 1.1E-19 126.8 8.5 71 48-120 2-85 (157)
35 2k8i_A SLYD, peptidyl-prolyl C 99.5 3.7E-14 1.3E-18 122.0 12.3 70 48-119 3-72 (171)
36 3prb_A FKBP-type peptidyl-prol 99.5 2.2E-14 7.4E-19 128.8 10.6 93 49-143 3-152 (231)
37 2kr7_A FKBP-type peptidyl-prol 99.5 3.1E-14 1.1E-18 120.2 10.6 72 47-120 6-78 (151)
38 2kfw_A FKBP-type peptidyl-prol 99.5 5.9E-14 2E-18 123.2 11.0 71 48-120 3-73 (196)
39 1ix5_A FKBP; ppiase, isomerase 99.5 1.2E-14 4.3E-19 122.6 6.2 73 48-121 2-87 (151)
40 3cgm_A SLYD, peptidyl-prolyl C 99.4 5.1E-13 1.7E-17 113.5 8.9 65 48-119 3-67 (158)
41 1w26_A Trigger factor, TF; cha 99.4 8.1E-13 2.8E-17 129.2 11.1 102 45-161 155-256 (432)
42 3rkv_A Putative peptidylprolyl 99.4 2.1E-13 7.1E-18 113.3 4.4 138 150-295 3-162 (162)
43 1t11_A Trigger factor, TF; hel 99.2 8.5E-12 2.9E-16 120.5 6.6 101 46-161 159-259 (392)
44 2fbn_A 70 kDa peptidylprolyl i 98.9 2.3E-09 7.7E-14 91.5 6.4 157 133-298 14-189 (198)
45 1ihg_A Cyclophilin 40; ppiase 98.7 5.6E-09 1.9E-13 99.5 5.1 136 151-294 216-370 (370)
46 2hr2_A Hypothetical protein; a 98.4 3.7E-08 1.3E-12 83.4 1.0 124 154-284 7-155 (159)
47 4gco_A Protein STI-1; structur 98.3 4.8E-07 1.7E-11 72.3 5.1 106 156-274 11-124 (126)
48 3gty_X Trigger factor, TF; cha 98.2 5.1E-06 1.7E-10 81.1 9.2 100 48-174 155-255 (433)
49 3upv_A Heat shock protein STI1 97.4 0.00011 3.9E-09 57.0 4.5 108 158-278 4-125 (126)
50 3sz7_A HSC70 cochaperone (SGT) 97.3 0.00017 6E-09 58.8 4.6 119 154-285 7-135 (164)
51 4gcn_A Protein STI-1; structur 96.8 0.00067 2.3E-08 53.6 3.4 105 156-274 6-125 (127)
52 3q49_B STIP1 homology and U bo 96.4 0.002 7E-08 49.9 3.7 72 206-284 51-135 (137)
53 2dba_A Smooth muscle cell asso 96.2 0.011 3.8E-07 45.8 7.0 109 158-276 28-144 (148)
54 4ga2_A E3 SUMO-protein ligase 96.1 0.01 3.5E-07 47.9 6.4 68 207-281 40-115 (150)
55 3ieg_A DNAJ homolog subfamily 95.8 0.02 6.9E-07 50.9 7.6 72 204-282 278-357 (359)
56 2c2l_A CHIP, carboxy terminus 95.3 0.017 5.7E-07 51.8 4.9 105 159-276 5-122 (281)
57 3urz_A Uncharacterized protein 95.1 0.071 2.4E-06 45.0 8.3 65 204-275 60-132 (208)
58 4gco_A Protein STI-1; structur 95.1 0.048 1.7E-06 42.6 6.6 80 206-293 21-108 (126)
59 1jvw_A Macrophage infectivity 95.0 0.012 4.1E-07 49.7 3.0 28 7-38 115-142 (167)
60 1wao_1 Serine/threonine protei 95.0 0.047 1.6E-06 53.0 7.6 109 157-278 5-121 (477)
61 2xcb_A PCRH, regulatory protei 94.9 0.038 1.3E-06 43.6 5.6 69 207-282 61-137 (142)
62 1elw_A TPR1-domain of HOP; HOP 94.9 0.056 1.9E-06 39.5 6.2 63 207-276 47-117 (118)
63 4ga2_A E3 SUMO-protein ligase 94.8 0.035 1.2E-06 44.6 5.2 63 207-276 74-145 (150)
64 1zu2_A Mitochondrial import re 94.8 0.043 1.5E-06 45.9 5.8 66 214-286 62-146 (158)
65 2vgx_A Chaperone SYCD; alterna 94.7 0.042 1.4E-06 44.2 5.3 64 207-277 64-135 (148)
66 1a17_A Serine/threonine protei 94.6 0.085 2.9E-06 41.5 7.0 113 153-278 8-128 (166)
67 1hxi_A PEX5, peroxisome target 94.6 0.083 2.8E-06 40.8 6.7 77 209-293 28-112 (121)
68 2d9f_A FK506-binding protein 8 94.4 0.026 9E-07 45.7 3.5 31 7-41 94-125 (135)
69 2kc7_A BFR218_protein; tetratr 94.4 0.047 1.6E-06 39.7 4.6 53 209-268 11-72 (99)
70 2pbc_A FK506-binding protein 2 94.2 0.023 7.9E-07 43.4 2.7 27 7-37 70-96 (102)
71 1na3_A Designed protein CTPR2; 94.0 0.14 4.7E-06 36.1 6.3 63 207-276 18-88 (91)
72 3vtx_A MAMA; tetratricopeptide 93.9 0.13 4.5E-06 41.6 6.8 65 206-277 13-85 (184)
73 2l6j_A TPR repeat-containing p 93.6 0.21 7.1E-06 36.4 7.0 52 207-265 13-72 (111)
74 1elr_A TPR2A-domain of HOP; HO 93.5 0.1 3.5E-06 38.9 5.2 69 206-282 46-129 (131)
75 2y4t_A DNAJ homolog subfamily 93.4 0.22 7.4E-06 46.1 8.2 70 204-280 301-378 (450)
76 1r9h_A FKB-6, FK506 binding pr 93.4 0.043 1.5E-06 44.4 2.9 28 7-38 94-121 (135)
77 3upv_A Heat shock protein STI1 93.3 0.27 9.3E-06 37.2 7.4 68 207-281 13-88 (126)
78 3gyz_A Chaperone protein IPGC; 93.2 0.12 4.2E-06 42.1 5.5 63 209-278 47-117 (151)
79 3k9i_A BH0479 protein; putativ 93.2 0.12 4E-06 39.2 5.1 63 204-273 33-103 (117)
80 2xev_A YBGF; tetratricopeptide 93.1 0.18 6E-06 38.1 5.9 65 206-277 47-122 (129)
81 3sz7_A HSC70 cochaperone (SGT) 92.8 0.28 9.7E-06 39.2 7.2 68 207-281 20-95 (164)
82 2vyi_A SGTA protein; chaperone 92.8 0.21 7.1E-06 37.0 5.9 66 207-279 55-128 (131)
83 2lni_A Stress-induced-phosphop 92.2 0.19 6.6E-06 37.6 5.0 64 207-277 59-130 (133)
84 2xcb_A PCRH, regulatory protei 92.0 0.25 8.5E-06 38.7 5.7 68 207-281 27-102 (142)
85 3gyz_A Chaperone protein IPGC; 92.0 0.26 8.8E-06 40.1 5.9 53 206-265 78-138 (151)
86 2gw1_A Mitochondrial precursor 91.9 0.31 1E-05 45.7 7.1 109 154-276 2-119 (514)
87 2h6f_A Protein farnesyltransfe 91.8 0.46 1.6E-05 44.7 8.2 64 207-277 175-246 (382)
88 3vtx_A MAMA; tetratricopeptide 91.6 0.13 4.4E-06 41.7 3.6 60 209-275 84-151 (184)
89 2h6f_A Protein farnesyltransfe 91.3 0.26 9E-06 46.5 5.9 80 207-294 140-228 (382)
90 4i17_A Hypothetical protein; T 90.9 0.13 4.5E-06 43.3 3.1 38 206-250 125-164 (228)
91 3ma5_A Tetratricopeptide repea 90.8 0.24 8.3E-06 36.5 4.2 43 207-256 16-58 (100)
92 4gyw_A UDP-N-acetylglucosamine 90.7 0.33 1.1E-05 49.9 6.4 63 211-280 90-160 (723)
93 2vgx_A Chaperone SYCD; alterna 90.7 0.74 2.5E-05 36.6 7.3 68 207-281 30-105 (148)
94 2pl2_A Hypothetical conserved 90.7 0.9 3.1E-05 38.3 8.2 65 207-278 14-86 (217)
95 4gcn_A Protein STI-1; structur 90.0 0.37 1.3E-05 37.3 4.8 54 206-266 16-77 (127)
96 2lni_A Stress-induced-phosphop 89.8 0.72 2.5E-05 34.2 6.2 79 207-293 25-111 (133)
97 3q49_B STIP1 homology and U bo 89.8 0.93 3.2E-05 34.3 6.9 68 207-281 18-93 (137)
98 3k9i_A BH0479 protein; putativ 89.4 0.35 1.2E-05 36.4 4.2 65 211-282 3-78 (117)
99 2e2e_A Formate-dependent nitri 89.1 1 3.4E-05 36.1 7.0 59 210-275 91-159 (177)
100 4i17_A Hypothetical protein; T 89.1 0.35 1.2E-05 40.6 4.4 56 205-267 49-112 (228)
101 3uq3_A Heat shock protein STI1 89.0 0.38 1.3E-05 40.3 4.4 63 207-276 148-218 (258)
102 1elw_A TPR1-domain of HOP; HOP 88.2 1.4 4.7E-05 31.7 6.7 80 207-294 13-100 (118)
103 2kck_A TPR repeat; tetratricop 87.9 1 3.5E-05 32.1 5.7 63 209-278 17-89 (112)
104 2l6j_A TPR repeat-containing p 87.8 0.62 2.1E-05 33.7 4.5 44 206-256 46-95 (111)
105 1hxi_A PEX5, peroxisome target 87.8 0.35 1.2E-05 37.1 3.1 53 207-266 60-120 (121)
106 4gyw_A UDP-N-acetylglucosamine 87.6 0.9 3.1E-05 46.6 7.0 80 207-294 52-139 (723)
107 3fp2_A TPR repeat-containing p 87.2 0.18 6.2E-06 47.8 1.4 107 145-266 12-127 (537)
108 2kat_A Uncharacterized protein 87.2 0.75 2.5E-05 34.2 4.7 52 207-265 28-87 (115)
109 2r5s_A Uncharacterized protein 86.8 0.83 2.8E-05 36.9 5.1 56 209-272 17-80 (176)
110 1hh8_A P67PHOX, NCF-2, neutrop 86.8 1.8 6.2E-05 35.4 7.3 82 205-294 44-149 (213)
111 1na0_A Designed protein CTPR3; 86.7 1.6 5.4E-05 31.6 6.3 63 207-276 52-122 (125)
112 2kat_A Uncharacterized protein 86.4 1.5 5.2E-05 32.4 6.1 57 216-279 3-67 (115)
113 1pc2_A Mitochondria fission pr 86.3 0.43 1.5E-05 39.5 3.0 62 213-280 50-120 (152)
114 3urz_A Uncharacterized protein 85.8 0.77 2.6E-05 38.4 4.5 65 209-280 15-103 (208)
115 3rkv_A Putative peptidylprolyl 85.7 1.5 5E-05 34.7 6.0 68 207-281 20-113 (162)
116 2pzi_A Probable serine/threoni 85.6 0.58 2E-05 47.3 4.3 78 207-293 442-527 (681)
117 2xev_A YBGF; tetratricopeptide 85.4 1.5 5.2E-05 32.6 5.7 79 209-295 13-105 (129)
118 2pl2_A Hypothetical conserved 85.3 1.3 4.3E-05 37.4 5.7 62 207-275 48-128 (217)
119 2c2l_A CHIP, carboxy terminus 85.1 2.7 9.4E-05 37.0 8.1 66 207-279 13-86 (281)
120 2q7f_A YRRB protein; TPR, prot 84.8 0.98 3.3E-05 37.5 4.7 80 207-294 134-221 (243)
121 3hym_B Cell division cycle pro 84.3 1.7 5.7E-05 37.7 6.2 62 207-275 245-314 (330)
122 1a17_A Serine/threonine protei 83.9 2.7 9.3E-05 32.4 6.8 80 207-294 22-109 (166)
123 3qky_A Outer membrane assembly 83.8 1.5 5.1E-05 37.5 5.6 73 207-283 157-247 (261)
124 3fp2_A TPR repeat-containing p 83.2 2.9 0.0001 39.2 7.8 68 207-281 34-109 (537)
125 2vyi_A SGTA protein; chaperone 83.0 5.1 0.00017 29.0 7.6 67 207-280 21-95 (131)
126 3mkr_A Coatomer subunit epsilo 82.6 2.9 0.0001 37.1 7.2 58 212-276 180-245 (291)
127 3qky_A Outer membrane assembly 82.1 3.3 0.00011 35.3 7.1 64 208-278 25-99 (261)
128 2vsy_A XCC0866; transferase, g 81.6 3 0.0001 40.4 7.4 82 206-294 65-156 (568)
129 2pzi_A Probable serine/threoni 81.6 2.1 7.1E-05 43.2 6.4 60 207-274 510-577 (681)
130 2dba_A Smooth muscle cell asso 81.4 2.5 8.6E-05 31.9 5.5 78 209-294 39-127 (148)
131 2yhc_A BAMD, UPF0169 lipoprote 80.9 4.3 0.00015 34.0 7.3 60 206-272 49-137 (225)
132 2hr2_A Hypothetical protein; a 80.7 2 6.9E-05 35.6 4.9 55 207-268 20-101 (159)
133 2e2e_A Formate-dependent nitri 79.9 4.7 0.00016 31.9 6.9 85 207-299 53-148 (177)
134 1na0_A Designed protein CTPR3; 79.4 5 0.00017 28.7 6.4 81 207-295 18-106 (125)
135 3mkr_A Coatomer subunit epsilo 79.2 2.1 7.2E-05 38.1 5.0 47 217-270 219-274 (291)
136 1p5q_A FKBP52, FK506-binding p 79.1 5.1 0.00017 36.3 7.6 66 207-279 156-244 (336)
137 1zu2_A Mitochondrial import re 78.8 2.8 9.5E-05 34.7 5.2 59 210-275 14-90 (158)
138 1xnf_A Lipoprotein NLPI; TPR, 78.8 4.5 0.00015 34.0 6.8 61 207-274 86-154 (275)
139 1xnf_A Lipoprotein NLPI; TPR, 78.7 5.3 0.00018 33.5 7.2 83 204-294 49-139 (275)
140 3bee_A Putative YFRE protein; 78.4 3.6 0.00012 30.3 5.3 46 214-266 25-78 (93)
141 3uq3_A Heat shock protein STI1 78.2 3.9 0.00013 33.8 6.1 58 209-273 184-255 (258)
142 2vsy_A XCC0866; transferase, g 77.9 4.7 0.00016 39.0 7.4 80 207-294 32-119 (568)
143 3ma5_A Tetratricopeptide repea 77.8 2.8 9.7E-05 30.5 4.6 46 235-280 3-56 (100)
144 1wao_1 Serine/threonine protei 77.6 3.2 0.00011 39.9 6.0 64 210-280 18-89 (477)
145 2kck_A TPR repeat; tetratricop 77.6 3.6 0.00012 29.0 5.0 51 207-264 49-110 (112)
146 2gw1_A Mitochondrial precursor 77.4 3.4 0.00012 38.4 6.0 59 211-276 428-494 (514)
147 1fch_A Peroxisomal targeting s 76.4 4.6 0.00016 35.7 6.4 67 207-280 226-300 (368)
148 2fbn_A 70 kDa peptidylprolyl i 76.2 9.6 0.00033 30.9 7.9 68 207-281 47-138 (198)
149 1fch_A Peroxisomal targeting s 75.7 4.3 0.00015 35.9 6.0 81 207-295 73-161 (368)
150 3as5_A MAMA; tetratricopeptide 75.2 7.9 0.00027 29.8 6.9 80 207-294 51-138 (186)
151 1w3b_A UDP-N-acetylglucosamine 75.1 5.6 0.00019 35.8 6.7 83 205-295 278-368 (388)
152 3ieg_A DNAJ homolog subfamily 74.9 5 0.00017 34.9 6.1 64 207-277 46-120 (359)
153 4eqf_A PEX5-related protein; a 74.9 4.9 0.00017 35.8 6.2 67 207-280 222-296 (365)
154 3hym_B Cell division cycle pro 74.7 4.9 0.00017 34.6 6.0 63 209-278 67-138 (330)
155 4eqf_A PEX5-related protein; a 74.6 3.3 0.00011 36.9 5.0 65 208-279 75-147 (365)
156 1ihg_A Cyclophilin 40; ppiase 74.5 5.6 0.00019 36.8 6.6 68 207-281 232-323 (370)
157 3u4t_A TPR repeat-containing p 74.2 9.3 0.00032 32.0 7.5 59 207-272 83-149 (272)
158 4abn_A Tetratricopeptide repea 73.9 4.6 0.00016 38.5 6.0 64 212-279 235-306 (474)
159 2ppn_A FK506-binding protein 1 73.7 1.5 5.1E-05 33.2 2.0 19 19-37 88-106 (107)
160 2vq2_A PILW, putative fimbrial 73.3 10 0.00034 30.4 7.3 40 210-256 54-94 (225)
161 2ho1_A Type 4 fimbrial biogene 73.0 11 0.00039 31.1 7.7 66 207-279 150-223 (252)
162 1yat_A FK506 binding protein; 73.0 1.6 5.4E-05 33.5 2.0 19 19-37 94-112 (113)
163 3as5_A MAMA; tetratricopeptide 73.0 7.3 0.00025 30.0 6.1 66 207-279 85-158 (186)
164 2vq2_A PILW, putative fimbrial 72.9 5.7 0.00019 32.0 5.6 65 207-278 122-195 (225)
165 2xpi_A Anaphase-promoting comp 71.3 4.5 0.00016 38.6 5.3 61 206-273 524-592 (597)
166 1elr_A TPR2A-domain of HOP; HO 71.2 6.4 0.00022 28.5 5.1 79 208-294 14-107 (131)
167 2q7f_A YRRB protein; TPR, prot 69.4 11 0.00039 30.7 6.8 63 209-278 102-172 (243)
168 1w3b_A UDP-N-acetylglucosamine 69.0 8 0.00027 34.7 6.2 63 207-276 76-146 (388)
169 2r5s_A Uncharacterized protein 68.7 7.8 0.00027 30.9 5.5 57 215-278 91-157 (176)
170 2y4t_A DNAJ homolog subfamily 68.6 21 0.00071 32.4 9.1 62 206-274 68-140 (450)
171 3qou_A Protein YBBN; thioredox 67.9 7.8 0.00027 34.0 5.8 40 210-256 129-168 (287)
172 2ho1_A Type 4 fimbrial biogene 67.3 17 0.00058 30.0 7.6 78 209-294 82-169 (252)
173 3cv0_A Peroxisome targeting si 66.9 8.7 0.0003 32.9 5.8 78 209-294 32-117 (327)
174 2yhc_A BAMD, UPF0169 lipoprote 66.8 16 0.00053 30.4 7.3 56 209-268 15-78 (225)
175 1hh8_A P67PHOX, NCF-2, neutrop 65.9 12 0.00042 30.1 6.2 53 207-266 80-156 (213)
176 3q7a_A Farnesyltransferase alp 63.4 22 0.00075 33.0 8.1 75 216-297 72-156 (349)
177 1qqe_A Vesicular transport pro 63.3 17 0.00058 31.7 7.1 55 205-266 165-234 (292)
178 3cv0_A Peroxisome targeting si 61.1 19 0.00066 30.6 6.9 67 207-280 181-255 (327)
179 4abn_A Tetratricopeptide repea 60.6 6.3 0.00022 37.5 3.9 61 212-279 193-272 (474)
180 3dra_A Protein farnesyltransfe 60.0 20 0.00068 32.5 7.0 78 214-298 49-142 (306)
181 3u4t_A TPR repeat-containing p 59.5 22 0.00074 29.6 6.8 64 207-278 117-189 (272)
182 3bee_A Putative YFRE protein; 59.0 23 0.0008 25.7 6.1 63 235-298 2-75 (93)
183 2fo7_A Synthetic consensus TPR 57.9 28 0.00095 24.7 6.4 62 208-276 45-114 (136)
184 3qou_A Protein YBBN; thioredox 57.3 23 0.0008 30.8 6.9 60 212-278 199-268 (287)
185 2fo7_A Synthetic consensus TPR 56.8 27 0.00091 24.8 6.2 80 208-295 11-98 (136)
186 1dce_A Protein (RAB geranylger 54.4 25 0.00086 34.6 7.2 58 213-277 124-190 (567)
187 2if4_A ATFKBP42; FKBP-like, al 53.8 11 0.00037 34.2 4.1 77 209-293 190-291 (338)
188 1nzn_A CGI-135 protein, fissio 52.2 11 0.00039 29.8 3.4 57 217-279 57-122 (126)
189 1dce_A Protein (RAB geranylger 50.2 36 0.0012 33.4 7.6 74 214-294 89-172 (567)
190 3q7a_A Farnesyltransferase alp 42.7 1E+02 0.0035 28.4 8.9 48 213-267 104-161 (349)
191 1na3_A Designed protein CTPR2; 42.4 33 0.0011 23.0 4.4 37 207-250 52-88 (91)
192 3n71_A Histone lysine methyltr 42.3 66 0.0023 31.0 7.9 93 189-281 342-448 (490)
193 3o48_A Mitochondria fission 1 41.4 27 0.00091 28.0 4.0 45 241-289 80-132 (134)
194 4g1t_A Interferon-induced prot 41.0 35 0.0012 31.2 5.5 55 213-274 228-290 (472)
195 1y8m_A FIS1; mitochondria, unk 38.7 31 0.0011 28.0 4.1 39 240-278 78-124 (144)
196 3dra_A Protein farnesyltransfe 38.4 30 0.001 31.2 4.5 60 211-277 157-232 (306)
197 3qwp_A SET and MYND domain-con 36.4 1.2E+02 0.0039 28.6 8.5 89 193-281 324-426 (429)
198 3dss_A Geranylgeranyl transfer 36.4 56 0.0019 29.9 6.0 57 214-277 126-191 (331)
199 2ond_A Cleavage stimulation fa 36.1 69 0.0024 27.7 6.5 72 215-294 81-162 (308)
200 2v5f_A Prolyl 4-hydroxylase su 35.8 38 0.0013 24.6 4.0 67 212-278 19-93 (104)
201 4f3v_A ESX-1 secretion system 34.2 45 0.0016 29.9 4.9 45 207-256 180-225 (282)
202 1qqe_A Vesicular transport pro 30.7 99 0.0034 26.5 6.5 53 207-266 126-193 (292)
203 3dss_A Geranylgeranyl transfer 29.5 92 0.0032 28.4 6.3 26 216-248 48-73 (331)
204 2ifu_A Gamma-SNAP; membrane fu 28.9 83 0.0028 27.3 5.7 52 206-265 163-228 (307)
205 3edt_B KLC 2, kinesin light ch 28.2 67 0.0023 26.2 4.7 74 206-279 93-183 (283)
206 2ond_A Cleavage stimulation fa 27.5 1.4E+02 0.0049 25.6 7.1 52 209-267 110-170 (308)
207 2xpi_A Anaphase-promoting comp 27.4 1.4E+02 0.0047 28.0 7.4 60 207-273 382-449 (597)
208 4g1t_A Interferon-induced prot 24.2 2.2E+02 0.0076 25.5 8.0 52 213-271 153-215 (472)
209 4a1s_A PINS, partner of inscut 23.7 74 0.0025 28.2 4.4 90 157-256 47-143 (411)
210 2v5f_A Prolyl 4-hydroxylase su 21.5 80 0.0027 22.7 3.5 41 199-246 47-87 (104)
211 3qww_A SET and MYND domain-con 20.7 1.9E+02 0.0065 27.2 6.8 62 195-256 337-399 (433)
No 1
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=100.00 E-value=9.7e-35 Score=274.77 Aligned_cols=268 Identities=14% Similarity=0.094 Sum_probs=180.0
Q ss_pred eeecccceEEEEeecCcCCCCCCCCcEEEEEEEEEEeC-CcEEeeeccCCCCeEEeeCCC-cccccHhHhhhccccCcEE
Q psy5048 28 LSLSPYSLSLILPRRAENLKPYVNVKICVSSFKPTFKL-TLVAMRIHDRDQPFTFTLGVG-QVIKGWDQGLTEMCVGEKR 105 (319)
Q Consensus 28 l~~d~~lv~~~i~~~G~G~~p~~~~~v~v~~y~~~l~d-g~v~d~s~~~~~p~~f~lG~~-~~i~Gle~al~~Mk~GE~~ 105 (319)
+......+.+.++++|.|..|..|+.|+|| |++++.+ |++||+++..+.|++|.+|.+ .+|+||+++|.+|++||++
T Consensus 44 ~~~~~~~~~~~~~~~g~g~~~~~gd~v~v~-y~g~~~~~g~~fd~~~~~~~~~~~~lg~~~~~i~g~e~~l~~m~~Ge~~ 122 (338)
T 2if4_A 44 AEVLDEKVSKQIIKEGHGSKPSKYSTCFLH-YRAWTKNSQHKFEDTWHEQQPIELVLGKEKKELAGLAIGVASMKSGERA 122 (338)
T ss_dssp CEEEETTEEEEEEECCBSCCCCTTCEEEEE-EEEEETTTCCCCEEHHHHTCCEEEETTSCCGGGHHHHHHHHHCCBTCEE
T ss_pred ceeCCCCeEEEEEeCCCCCCCCCCCEEEEE-EEEEEcCCCcEeecccCCCCCeEEEcCCCCcccHHHHHHHhcCCCCCeE
Confidence 345566788899999999999999999986 9999985 999999988788999999998 8999999999999999999
Q ss_pred EEEeCCCCCCCCCCC--CCCCCCCCeEEEEEEEeeeeecc--chhhccCccccchhhhhhhhcCCcccccchHHHHHHHH
Q psy5048 106 KLTIPPALAYGDRGA--GNVIPGGLSAVRQSEHSELEIST--KFFLELIPNKFLHWDRRFTQKGPMAKNREHIAHRARRD 181 (319)
Q Consensus 106 ~v~i~p~~ayG~~g~--~~~Ip~~~~l~feVeL~~v~~~~--~~~~~m~~eek~~~a~~~ke~Gn~~~~~~~~~~~~~~~ 181 (319)
.|+|||+++||..+. .+.||++++++|+|+|+++...+ ...|.++.+++...+...+..|+.++..+++..+...-
T Consensus 123 ~~~i~~~~~yg~~~~~~~~~ip~~~~l~f~v~L~~~~~~~e~~~~~~~~~~~~~~~a~~~~~~g~~~~~~g~~~~A~~~y 202 (338)
T 2if4_A 123 LVHVGWELAYGKEGNFSFPNVPPMADLLYEVEVIGFDETKEGKARSDMTVEERIGAADRRKMDGNSLFKEEKLEEAMQQY 202 (338)
T ss_dssp EEEECGGGSSCSSCCCSSSCCCTTCCEEEEEEEEEEECCCCCBTTTBCCHHHHHHHHHHHHHHHHHTCSSSCCHHHHHHH
T ss_pred EEEECHHHhcCCCCCCCCCCCCCCCcEEEEEEEEEecCCccccccccCCHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHH
Confidence 999999999999987 35699999999999999998644 35789999999999999999999998888776544311
Q ss_pred hhhhhcccC-------Cc-chhHHH----HHHHhhHHHHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHH
Q psy5048 182 RGKRRIQSF-------KP-HRAESE----KLYAHCSSAYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRL 249 (319)
Q Consensus 182 ~~k~~~~~~-------k~-~~~~~~----~l~~~~~~~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~ 249 (319)
.+...... .. .+.... .++.++-.++..+..+..|+..|..+|+.+| +|++||||+|.++
T Consensus 203 -~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p-------~~~~a~~~lg~a~ 274 (338)
T 2if4_A 203 -EMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCNIVLTEEE-------KNPKALFRRGKAK 274 (338)
T ss_dssp -HHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHHHHHHHHCT-------TCHHHHHHHHHHH
T ss_pred -HHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-------CCHHHHHHHHHHH
Confidence 11110000 00 001111 1222333366777999999999999999999 9999999999988
Q ss_pred HhcCccc--------cccCCCChhhHHHHHHHHHHHHhHhHHHHHHHHHhcccCCCCCCchhh
Q psy5048 250 ALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQRGHMITQGSLYFFLFYNMSSPLNKVN 304 (319)
Q Consensus 250 ~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~k~~~~kek~~y~~mF~~~~~~~~~~~ 304 (319)
..+++++ |++++|+|..+...|..+..+++.+.++++++|.+||+..+...+|.+
T Consensus 275 ~~~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l~~~~~~~~~~a~~~~~~~l~~~p~~~~~~~ 337 (338)
T 2if4_A 275 AELGQMDSARDDFRKAQKYAPDDKAIRRELRALAEQEKALYQKQKEMYKGIFKGKDEGGAKSK 337 (338)
T ss_dssp HTTTCHHHHHHHHHHTTC---------------------------------------------
T ss_pred HHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCCCCC
Confidence 8888886 899999999999999999999999999999999999999888777653
No 2
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.98 E-value=4.7e-31 Score=259.29 Aligned_cols=277 Identities=14% Similarity=0.138 Sum_probs=216.9
Q ss_pred cccCCCCCCCCCCCCCCCCCCeeecccceEEE-------------EeecCcCC-CCCCCCcEEEEEEEEEEeCCcEEeee
Q psy5048 7 LPFGENRNPFYKTPCIRPRSTLSLSPYSLSLI-------------LPRRAENL-KPYVNVKICVSSFKPTFKLTLVAMRI 72 (319)
Q Consensus 7 ~~~g~~g~~~~~~p~Ipp~atl~~d~~lv~~~-------------i~~~G~G~-~p~~~~~v~v~~y~~~l~dg~v~d~s 72 (319)
++||..|.| |.||||++|.|+++++++. +++.|.|. +|..++.|+|| |++++ ||++|+++
T Consensus 111 ~~yg~~g~~----~~i~~~~~l~~~v~l~~~~~~~~~~dg~~~k~i~~~g~~~~~p~~g~~V~v~-y~g~~-~g~~f~~~ 184 (457)
T 1kt0_A 111 YAYGSAGSL----PKIPSNATLFFEIELLDFKGEDLFEDGGIIRRTKRKGEGYSNPNEGATVEIH-LEGRC-GGRMFDCR 184 (457)
T ss_dssp GTTTTTCBT----TTBCTTCCEEEEEEEEEEECEETTSSSSEEEEEEECCBCSCCCCTTCEEEEE-EEEEE-TTEEEEEE
T ss_pred HhccccCCC----CCCCCCCcEEEEEeeceeecccccCCcceEEEEEecCCCCCCCCCCCEEEEE-EEEEe-CCeEEecC
Confidence 579999988 8999999999999998774 34567774 78899999986 99998 99999974
Q ss_pred ccCCCCeEEeeCCC---cccccHhHhhhccccCcEEEEEeCCCCCCCCCCCCC-CCCCCCeEEEEEEEeeeeeccchhhc
Q psy5048 73 HDRDQPFTFTLGVG---QVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGN-VIPGGLSAVRQSEHSELEISTKFFLE 148 (319)
Q Consensus 73 ~~~~~p~~f~lG~~---~~i~Gle~al~~Mk~GE~~~v~i~p~~ayG~~g~~~-~Ip~~~~l~feVeL~~v~~~~~~~~~ 148 (319)
++.|.+|.| .+++||+.|+..|+.||++.|.++|.++||..|... .|||++++.|+++|.++....+ .|.
T Consensus 185 -----~~~f~~g~g~~~~v~~~~e~al~~~~~ge~~~l~i~P~~ay~~~g~~~~~ip~~~~l~y~~~l~~~~~A~~-~~~ 258 (457)
T 1kt0_A 185 -----DVAFTVGEGEDHDIPIGIDKALEKMQREEQCILYLGPRYGFGEAGKPKFGIEPNAELIYEVTLKSFEKAKE-SWE 258 (457)
T ss_dssp -----EEEEETTCGGGGTCCHHHHHHHTTCCBTCEEEEEECGGGTTCSSCBGGGTBCTTCCEEEEEEEEEEECCCC-GGG
T ss_pred -----ceEEEeCCCccccCChHHHHHHHhCCCCCEEEEEECcccccCCCCCcccCCCCCCEEEEEhhhhhcccCcc-hhh
Confidence 599999977 489999999999999999999999999999999754 4999999999999999998764 588
Q ss_pred cCccccchhhhhhhhcCCcccccchHHHHHHHH--hhhhhccc--CCc-c----hhHHHHHHHhhHHHHHHhcccchhHh
Q psy5048 149 LIPNKFLHWDRRFTQKGPMAKNREHIAHRARRD--RGKRRIQS--FKP-H----RAESEKLYAHCSSAYALLVKKTPSIH 219 (319)
Q Consensus 149 m~~eek~~~a~~~ke~Gn~~~~~~~~~~~~~~~--~~k~~~~~--~k~-~----~~~~~~l~~~~~~~~~~~~~~~~a~~ 219 (319)
+..+++...+......|+.++..++|..+...- ........ +.. . ......++.++-.|+..+.++..|+.
T Consensus 259 ~~~~~~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~ 338 (457)
T 1kt0_A 259 MDTKEKLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVE 338 (457)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 888888889999999999999888886544311 11111111 000 0 01112333333447788899999999
Q ss_pred HHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHHhHhHHHHHHHHHh
Q psy5048 220 NCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQRGHMITQGSLYFF 291 (319)
Q Consensus 220 ~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~k~~~~kek~~y~~ 291 (319)
.|+++|+.+| +|++||||||+++..+++++ |++++|+|..+...|..+..+++++.++++++|++
T Consensus 339 ~~~~al~~~p-------~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~~~a~~~~~~~ 411 (457)
T 1kt0_A 339 CCDKALGLDS-------ANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQISMCQKKAKEHNERDRRIYAN 411 (457)
T ss_dssp HHHHHHHHST-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----CHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCC-------ccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999 99999999999888888886 99999999999999999999999999999999999
Q ss_pred cccCCCCCCch
Q psy5048 292 LFYNMSSPLNK 302 (319)
Q Consensus 292 mF~~~~~~~~~ 302 (319)
||.++.....+
T Consensus 412 ~f~k~~~~d~~ 422 (457)
T 1kt0_A 412 MFKKFAEQDAK 422 (457)
T ss_dssp C----------
T ss_pred HHhhhhhcccc
Confidence 99998876655
No 3
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.95 E-value=1.6e-27 Score=224.79 Aligned_cols=255 Identities=13% Similarity=0.141 Sum_probs=206.6
Q ss_pred cccceEEEEeecCcCC-CCCCCCcEEEEEEEEEEeCCcEEeeeccCCCCeEEeeCCCc---ccccHhHhhhccccCcEEE
Q psy5048 31 SPYSLSLILPRRAENL-KPYVNVKICVSSFKPTFKLTLVAMRIHDRDQPFTFTLGVGQ---VIKGWDQGLTEMCVGEKRK 106 (319)
Q Consensus 31 d~~lv~~~i~~~G~G~-~p~~~~~v~v~~y~~~l~dg~v~d~s~~~~~p~~f~lG~~~---~i~Gle~al~~Mk~GE~~~ 106 (319)
....|.+.++++|.|. .|..++.|+|| |++++ +|++||++ |+.|.+|.|. +++||++||.+|++||++.
T Consensus 23 ~~~~~~~~~~~~g~g~~~p~~~~~v~v~-y~g~~-~g~~fd~~-----~~~f~lG~g~~~~~~~~~e~al~~~~~Ge~~~ 95 (336)
T 1p5q_A 23 EDGGIIRRIQTRGEGYAKPNEGAIVEVA-LEGYY-KDKLFDQR-----ELRFEIGEGENLDLPYGLERAIQRMEKGEHSI 95 (336)
T ss_dssp CTTSEEEEEEECCCCSCCCCTTCEEEEE-EEEEE-TTEEEEEE-----EEEEETTCGGGGTCCHHHHHHHTTCCTTCEEE
T ss_pred CCCcEEEEEEeCCCCCCCCCCCCeEEEE-EEEEE-CCEEEecC-----CeEEEeCCCCccccchHHHHHHhcCCCCCeEE
Confidence 3445677889999997 79999999986 99998 99999997 8999999886 5899999999999999999
Q ss_pred EEeCCCCCCCCCCCCC-CCCCCCeEEEEEEEeeeeeccchhhccCccccchhhhhhhhcCCcccccchHHHHHHHH--hh
Q psy5048 107 LTIPPALAYGDRGAGN-VIPGGLSAVRQSEHSELEISTKFFLELIPNKFLHWDRRFTQKGPMAKNREHIAHRARRD--RG 183 (319)
Q Consensus 107 v~i~p~~ayG~~g~~~-~Ip~~~~l~feVeL~~v~~~~~~~~~m~~eek~~~a~~~ke~Gn~~~~~~~~~~~~~~~--~~ 183 (319)
|.|+|.++||..|... .||+++++.|+++|.+++...+ .+.+..+.+...+......|+.++..+++..+...- ..
T Consensus 96 l~i~p~~ayg~~g~~~~~i~~~~~l~f~~~L~~~~~A~~-~~~~a~~~~p~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al 174 (336)
T 1p5q_A 96 VYLKPSYAFGSVGKEKFQIPPNAELKYELHLKSFEKAKE-SWEMNSEEKLEQSTIVKERGTVYFKEGKYKQALLQYKKIV 174 (336)
T ss_dssp EEECTTTTTTTTCBGGGTBCSSCCEEEEEEEEEEECCCC-GGGCCHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred EEECCccccCcCCCCccCCCCCCeEEEEEEEeecccccc-hhcCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 9999999999999775 4999999999999999997664 477777777778888889999998888886543311 11
Q ss_pred hhhccc--CCcc-hhHH----HHHHHhhHHHHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc
Q psy5048 184 KRRIQS--FKPH-RAES----EKLYAHCSSAYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL 256 (319)
Q Consensus 184 k~~~~~--~k~~-~~~~----~~l~~~~~~~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~ 256 (319)
...... .... .... ...+.++-.++..+.++..|+..|..+++.+| +|++|||++|..+..+++++
T Consensus 175 ~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p-------~~~~a~~~lg~~~~~~g~~~ 247 (336)
T 1p5q_A 175 SWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELDS-------NNEKGLSRRGEAHLAVNDFE 247 (336)
T ss_dssp HHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCHH
T ss_pred HHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-------CcHHHHHHHHHHHHHCCCHH
Confidence 111111 0000 0011 12333333466778999999999999999999 99999999999888888886
Q ss_pred --------cccCCCChhhHHHHHHHHHHHHhHhHHHHHHHHHhcccCCCCCC
Q psy5048 257 --------QYEFPPEQSQCLPLLGIRAQHQRGHMITQGSLYFFLFYNMSSPL 300 (319)
Q Consensus 257 --------a~~~dP~n~~i~~el~~l~~~~k~~~~kek~~y~~mF~~~~~~~ 300 (319)
|++++|++..+...|..+..++.++.+.++++|++||.+++...
T Consensus 248 ~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 299 (336)
T 1p5q_A 248 LARADFQKVLQLYPNNKAAKTQLAVCQQRIRRQLAREKKLYANMFERLAEEE 299 (336)
T ss_dssp HHHHHHHHHHHHCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence 89999999999999999999999999999999999998755433
No 4
>2f4e_A ATFKBP42; FKBP-like, alpha-beta, signaling protein; 2.32A {Arabidopsis thaliana}
Probab=99.91 E-value=3.3e-24 Score=186.61 Aligned_cols=131 Identities=15% Similarity=0.162 Sum_probs=106.2
Q ss_pred CeeecccceEEEEeecCcCCCCCCCCcEEEEEEEEEEe-CCcEEeeeccCCCCeEEeeCCC-cccccHhHhhhccccCcE
Q psy5048 27 TLSLSPYSLSLILPRRAENLKPYVNVKICVSSFKPTFK-LTLVAMRIHDRDQPFTFTLGVG-QVIKGWDQGLTEMCVGEK 104 (319)
Q Consensus 27 tl~~d~~lv~~~i~~~G~G~~p~~~~~v~v~~y~~~l~-dg~v~d~s~~~~~p~~f~lG~~-~~i~Gle~al~~Mk~GE~ 104 (319)
........+.+.+++.|.|..|..++.|+++ |++++. ||++|++++..+.|+.|.+|.+ ++|+||+++|.+|++|++
T Consensus 43 ~~~~~~~gl~~~vl~~G~G~~~~~Gd~V~v~-Y~g~l~~dG~~fdss~~~~~p~~f~lG~g~~vi~G~eeaL~gMk~Ge~ 121 (180)
T 2f4e_A 43 EAEVLDEKVSKQIIKEGHGSKPSKYSTCFLH-YRAWTKNSQHKFEDTWHEQQPIELVLGKEKKELAGLAIGVASMKSGER 121 (180)
T ss_dssp CCEEEETTEEEEEEECCBSCCBCTTCEEEEE-EEEEETTTCCEEEETTTTTCCEEEETTSCCGGGHHHHHHHTTCCBTCE
T ss_pred CcEECCCceEEEEEeCCCCCCCCCCCEEEEE-EEEEECCCCcEEeccCccCCCEEEEeCCCCchhHHHHHHHhCCCCCCE
Confidence 3456667788999999999999999999986 999998 5999999988888999999999 999999999999999999
Q ss_pred EEEEeCCCCCCCCCCC--CCCCCCCCeEEEEEEEeeeeeccc--hhhccCccccchhh
Q psy5048 105 RKLTIPPALAYGDRGA--GNVIPGGLSAVRQSEHSELEISTK--FFLELIPNKFLHWD 158 (319)
Q Consensus 105 ~~v~i~p~~ayG~~g~--~~~Ip~~~~l~feVeL~~v~~~~~--~~~~m~~eek~~~a 158 (319)
+.|+|||+++||..+. .+.||||++|+|+|+|++|..+++ ..|+|+.+|+++.|
T Consensus 122 ~~v~iPp~~aYG~~g~~~~~~Ip~~s~l~F~VeL~~v~~~~e~~~~~~mt~eErl~~A 179 (180)
T 2f4e_A 122 ALVHVGWELAYGKEGNFSFPNVPPMADLLYEVEVIGFDETKEGKARSDMTVEERIGAA 179 (180)
T ss_dssp EEEEECGGGTTTTTCBSSSSCBCTTCCEEEEEEEEEESCBCCC---------------
T ss_pred EEEEECchHhCCcCCcccCCCcCCCCeEEEEEEEEEEecCccccccccCCHHHHHhhc
Confidence 9999999999999986 456999999999999999997663 47999999999876
No 5
>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A
Probab=99.91 E-value=3e-24 Score=205.49 Aligned_cols=134 Identities=23% Similarity=0.370 Sum_probs=119.1
Q ss_pred cccCCCCCCC-CCCCCCCCCCCeeecccceEEE--------------EeecCcC-CCCCCCCcEEEEEEEEEEeCCcEEe
Q psy5048 7 LPFGENRNPF-YKTPCIRPRSTLSLSPYSLSLI--------------LPRRAEN-LKPYVNVKICVSSFKPTFKLTLVAM 70 (319)
Q Consensus 7 ~~~g~~g~~~-~~~p~Ipp~atl~~d~~lv~~~--------------i~~~G~G-~~p~~~~~v~v~~y~~~l~dg~v~d 70 (319)
++||+.|+|. ...+.||||++|.|++++++|. ++++|.| ..|..++.|++| |++++.||++|+
T Consensus 203 ~~yg~~G~~~~~~~~~ip~~~~l~~~vel~~~~~v~dv~~d~~~~~~i~~~g~g~~~~~~gd~V~v~-y~g~l~dG~~fd 281 (356)
T 3jxv_A 203 YGFGEMGRPAAGEGGAVPPNASLVIDLELVSWKTVTEIGDDKKILKKVLKEXEGYERPNEGAVVTVK-ITGKLQDGTVFL 281 (356)
T ss_dssp GTTTTTCBCCCC--CCBCTTCCEEEEEEEEEEECEEEESTTCCEEEEEEECCBSSCCCCTTCEEEEE-EEEEESSSCEEE
T ss_pred hhcCCCCCCcccccccCCCCcEEEEEEEEEEEecccccccccceeEEeeecccccCCCCCCCEEEEE-EEEEECCCCEEe
Confidence 5899999984 3457899999999999999984 5677888 689899999986 999999999999
Q ss_pred eec-cCCCCeEEeeCCCcccccHhHhhhccccCcEEEEEeCCCCCCCCCCC--CCCCCCCCeEEEEEEEeeeee
Q psy5048 71 RIH-DRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGA--GNVIPGGLSAVRQSEHSELEI 141 (319)
Q Consensus 71 ~s~-~~~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~~v~i~p~~ayG~~g~--~~~Ip~~~~l~feVeL~~v~~ 141 (319)
++. ..++|+.|.+|.+++|+||+++|.+|++||++.|+|||+++||..+. ...||||++|+|+|+|++|++
T Consensus 282 ~~~~~~~~p~~f~~G~g~~i~G~e~~l~gm~~Ge~~~v~ip~~~aYG~~~~~~~~~Ip~~~~l~f~vel~~~~~ 355 (356)
T 3jxv_A 282 KKGHDEQEPFEFKTDEEAVIEGLDRAVLNMKKGEVALVTIPPEYAYGSTESKQDAIVPPNSTVIYEVELVSFVK 355 (356)
T ss_dssp EESCTTSCCCEEETTTTSSCHHHHHHHTTCCBTCEEEEEECGGGTTTTSCEESSSEECTTCCEEEEEEEEEEEC
T ss_pred eccccCCcCEEEEECCCccchHHHHHHhCCCCCCEEEEEEChHHccCCCCcCCCCcCCcCCeEEEEEEEEEEEc
Confidence 984 55789999999999999999999999999999999999999999884 356999999999999999974
No 6
>1yat_A FK506 binding protein; HET: FK5; 2.50A {Saccharomyces cerevisiae} SCOP: d.26.1.1
Probab=99.90 E-value=6.7e-23 Score=164.89 Aligned_cols=109 Identities=31% Similarity=0.487 Sum_probs=100.8
Q ss_pred cccceEEEEeecCcCCC-CCCCCcEEEEEEEEEEeCCcEEeeeccCCCCeEEeeCCCcccccHhHhhhccccCcEEEEEe
Q psy5048 31 SPYSLSLILPRRAENLK-PYVNVKICVSSFKPTFKLTLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTI 109 (319)
Q Consensus 31 d~~lv~~~i~~~G~G~~-p~~~~~v~v~~y~~~l~dg~v~d~s~~~~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~~v~i 109 (319)
....+.+.++++|.|.. |..++.|+++ |++++.||++|++++..+.|+.|.+|.+++++||+++|.+|++||+++|.|
T Consensus 4 ~~~g~~~~~~~~G~g~~~~~~gd~V~v~-y~~~~~dG~~~d~s~~~~~p~~f~lG~~~~i~g~e~~l~gm~~Ge~~~v~i 82 (113)
T 1yat_A 4 IEGNVKIDRISPGDGATFPKTGDLVTIH-YTGTLENGQKFDSSVDRGSPFQCNIGVGQVIKGWDVGIPKLSVGEKARLTI 82 (113)
T ss_dssp CGGGCEEEEEECCCSSCCCCTTCEEEEE-EEEEETTSCEEEESTTTTCCEEEETTSSSSCHHHHHHGGGCCTTCEEEEEE
T ss_pred CCCCeEEEEEECCCCcccCCCCCEEEEE-EEEEECCCCEEEecCCCCCcEEEEeCCCCccHHHHHHHhCCCCCCEEEEEE
Confidence 34557788899999988 9999999986 999999999999998877899999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCeEEEEEEEeeee
Q psy5048 110 PPALAYGDRGAGNVIPGGLSAVRQSEHSELE 140 (319)
Q Consensus 110 ~p~~ayG~~g~~~~Ip~~~~l~feVeL~~v~ 140 (319)
||+++||..+.++.||||++|+|+|+|++|+
T Consensus 83 p~~~ayG~~~~~~~Ip~~~~l~f~vel~~ik 113 (113)
T 1yat_A 83 PGPYAYGPRGFPGLIPPNSTLVFDVELLKVN 113 (113)
T ss_dssp CGGGTTTTTCBTTTBCTTCCEEEEEEEEEEC
T ss_pred CHHHCcCCCCCCCCcCCCCeEEEEEEEEEeC
Confidence 9999999999888899999999999999874
No 7
>2lkn_A AH receptor-interacting protein; FKBP-type domain, immunophilin homolog, protein binding; NMR {Homo sapiens}
Probab=99.89 E-value=3.2e-24 Score=183.65 Aligned_cols=111 Identities=12% Similarity=0.080 Sum_probs=94.3
Q ss_pred ccceEEEEeecCcCCCCC--CCCcEEEEEEEEEEeC--CcEEeeeccCCCCeEEeeCCCcccccHhHhhhccccCcEEEE
Q psy5048 32 PYSLSLILPRRAENLKPY--VNVKICVSSFKPTFKL--TLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKL 107 (319)
Q Consensus 32 ~~lv~~~i~~~G~G~~p~--~~~~v~v~~y~~~l~d--g~v~d~s~~~~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~~v 107 (319)
...|.+.++++|.|..|. .|+.|+|| |++++.| |++||||+.+++|++|.+|.+++|+||++||.+|++||+++|
T Consensus 9 ~~Gv~~~vl~~G~G~~p~~~~G~~V~vh-Y~g~l~d~~G~~FDsS~~rg~P~~f~lG~g~vI~Gwd~gl~~M~~Ge~~~~ 87 (165)
T 2lkn_A 9 EDGIQKRVIQEGRGELPDFQDGTKATFH-YRTLHSDDEGTVLDDSRARGKPMELIIGKKFKLPVWETIVCTMREGEIAQF 87 (165)
T ss_dssp TTSCCCCEEECCSSCCCCCCTTCEEEEE-CEEECSSSSCCEEEESTTTTCCEEEESSSSCSCSHHHHHHTTCCTTCEEEE
T ss_pred CCCeEEEEEECCcCCCCCCCCCCEEEEE-EEEEEeCCCccEEEecccCCCCEEEEecCCCccHHHHHHHhcCccCceEEE
Confidence 345667789999998764 67888886 9999965 999999999999999999999999999999999999999999
Q ss_pred EeCCCCCCCCC-----------C--------------------------CCCCCCCCCeEEEEEEEeeeeecc
Q psy5048 108 TIPPALAYGDR-----------G--------------------------AGNVIPGGLSAVRQSEHSELEIST 143 (319)
Q Consensus 108 ~i~p~~ayG~~-----------g--------------------------~~~~Ip~~~~l~feVeL~~v~~~~ 143 (319)
+|||+++||+. + ...+|+++++|+|+|||++|+.+.
T Consensus 88 ~ipp~laYG~p~v~~~~r~~~~~~~p~~~~~~~~g~~~~~~~~~~g~~d~~~li~~p~~L~FeIELl~Ve~P~ 160 (165)
T 2lkn_A 88 LCDIKHVVLYPLVAKSLRNIAVGKDPLEGQRHCCGVAQMREHSSLGHADLDALQQNPQPLIFHMEMLKVESPG 160 (165)
T ss_dssp ECCHHHHSSHHHHHHHHTTGGGSSTTTTTCSCCSSCCSCCCCCCCCCSTTTHHHHSCCCCEEEEEEEEEECTT
T ss_pred EECHHHhcCCcchhhhhhhccccCCCccccccceeeeeccccccccccccccccCCCCCeEEEEEEEEEcCCc
Confidence 99999999931 0 011245668899999999999765
No 8
>2ppn_A FK506-binding protein 1A; high resolution protein structure, isomerase; 0.92A {Homo sapiens} SCOP: d.26.1.1 PDB: 1b6c_A 1a7x_A 1d7h_A 1d7i_A 1d7j_A* 1f40_A* 1fap_A* 1d6o_A* 1fkd_A* 1fkf_A* 1fkg_A* 1fkh_A* 1fki_A* 1fkj_A* 1fkr_A 1fks_A 1fkt_A 1j4h_A* 1j4i_A* 1j4r_A* ...
Probab=99.89 E-value=4.5e-23 Score=164.17 Aligned_cols=105 Identities=30% Similarity=0.516 Sum_probs=97.8
Q ss_pred eEEEEeecCcCCC-CCCCCcEEEEEEEEEEeCCcEEeeeccCCCCeEEeeCCCcccccHhHhhhccccCcEEEEEeCCCC
Q psy5048 35 LSLILPRRAENLK-PYVNVKICVSSFKPTFKLTLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPAL 113 (319)
Q Consensus 35 v~~~i~~~G~G~~-p~~~~~v~v~~y~~~l~dg~v~d~s~~~~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~~v~i~p~~ 113 (319)
|.+.++++|+|.. |..++.|+++ |++++.||++|++++..++|++|.+|.+++++||+++|.+|++||+++|.|||++
T Consensus 2 l~~~~~~~G~g~~~~~~gd~V~v~-y~~~~~dG~~~d~s~~~~~p~~f~lG~~~~i~g~~~~l~gm~~Ge~~~~~ip~~~ 80 (107)
T 2ppn_A 2 VQVETISPGDGRTFPKRGQTCVVH-YTGMLEDGKKFDSSRDRNKPFKFMLGKQEVIRGWEEGVAQMSVGQRAKLTISPDY 80 (107)
T ss_dssp EEEEEEECCCSSCCCCTTCEEEEE-EEEEETTSCEEEEHHHHTSCEEEETTSCCSCHHHHHHHTTCCTTCEEEEEECGGG
T ss_pred cEEEEEECcCCCcCCCCCCEEEEE-EEEEECCCCEEEecCCCCCCEEEEeCCCChHHHHHHHHhCCCCCCEEEEEECHHH
Confidence 5677899999987 9999999986 9999999999999987678999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCeEEEEEEEeeee
Q psy5048 114 AYGDRGAGNVIPGGLSAVRQSEHSELE 140 (319)
Q Consensus 114 ayG~~g~~~~Ip~~~~l~feVeL~~v~ 140 (319)
+||..+.++.||||++|+|+|+|++|+
T Consensus 81 ayG~~~~~~~Ip~~~~l~f~v~l~~v~ 107 (107)
T 2ppn_A 81 AYGATGHPGIIPPHATLVFDVELLKLE 107 (107)
T ss_dssp TTTTTCBTTTBCTTCCEEEEEEEEEEC
T ss_pred ccCCCCCCCCcCCCCeEEEEEEEEEeC
Confidence 999999877899999999999999874
No 9
>3o5e_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 1.60A {Homo sapiens} PDB: 3o5f_A
Probab=99.89 E-value=6.3e-23 Score=172.32 Aligned_cols=108 Identities=31% Similarity=0.473 Sum_probs=100.5
Q ss_pred cceEEEEeecCcCC-CCCCCCcEEEEEEEEEEeCCcEEeeeccCCCCeEEeeCCCcccccHhHhhhccccCcEEEEEeCC
Q psy5048 33 YSLSLILPRRAENL-KPYVNVKICVSSFKPTFKLTLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPP 111 (319)
Q Consensus 33 ~lv~~~i~~~G~G~-~p~~~~~v~v~~y~~~l~dg~v~d~s~~~~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~~v~i~p 111 (319)
..+.+.++++|.|. .|..++.|++| |++++.||++|++++.++.|+.|.+|.+++|+||+++|.+|++||++.|+|||
T Consensus 35 ~gv~~~i~~~G~G~~~p~~gd~V~v~-Y~g~~~dG~~fdss~~~~~p~~f~lG~g~~i~G~e~~l~gm~~Ge~~~v~ipp 113 (144)
T 3o5e_A 35 RGVLKIVKRVGNGEETPMIGDKVYVH-YKGKLSNGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKKGEICHLLCKP 113 (144)
T ss_dssp SSEEEEEEECCBSSCCCCTTCEEEEE-EEEECTTSCEEEESGGGTSCEEEETTSSSSCHHHHHHHTTCCBTCEEEEEECG
T ss_pred CeEEEEEEECCCCCccCCCCCEEEEE-EEEEECCCCEEEeecccCCCeEEEeCCCcccHHHHHHHhCCCCCCEEEEEECh
Confidence 34667789999997 78899999986 99999999999999988889999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCeEEEEEEEeeeee
Q psy5048 112 ALAYGDRGAGNVIPGGLSAVRQSEHSELEI 141 (319)
Q Consensus 112 ~~ayG~~g~~~~Ip~~~~l~feVeL~~v~~ 141 (319)
+++||..+.++.||||++|+|+|+|++|+.
T Consensus 114 ~~aYG~~g~~~~Ipp~~~L~f~VeL~~ikg 143 (144)
T 3o5e_A 114 EYAYGSAGSLPKIPSNATLFFEIELLDFKG 143 (144)
T ss_dssp GGTTTTTCBTTTBCTTCCEEEEEEEEEEEC
T ss_pred HHCcCCCCCCCCcCCCCeEEEEEEEEEecC
Confidence 999999998888999999999999999874
No 10
>3kz7_A FK506-binding protein 3; FKPB ppiase rapamycin, isomerase, nucleus, phosphoprotein, R isomerase-inhibitor complex; HET: RAP; 1.95A {Mus musculus} SCOP: d.26.1.1 PDB: 1pbk_A*
Probab=99.89 E-value=8.3e-23 Score=165.73 Aligned_cols=108 Identities=27% Similarity=0.480 Sum_probs=97.8
Q ss_pred ccceEEEEeecCcCC-CCCCCCcEEEEEEEEEEeCCcEEeeeccC-------CCCeEEeeCCCcccccHhHhhhccccCc
Q psy5048 32 PYSLSLILPRRAENL-KPYVNVKICVSSFKPTFKLTLVAMRIHDR-------DQPFTFTLGVGQVIKGWDQGLTEMCVGE 103 (319)
Q Consensus 32 ~~lv~~~i~~~G~G~-~p~~~~~v~v~~y~~~l~dg~v~d~s~~~-------~~p~~f~lG~~~~i~Gle~al~~Mk~GE 103 (319)
+..+.+.++++|+|. .|..++.|+++ |++++.||++|++++.. +.|+.|.+|.+++|+||+++|.+|++||
T Consensus 3 p~g~~~~il~~G~g~~~p~~gd~V~v~-Y~g~~~dG~~fdss~~~~~~~~~~~~p~~f~lG~~~~i~G~e~~l~gm~~Ge 81 (119)
T 3kz7_A 3 PPKYTKSILKKGDKTNFPKKGDVVHCW-YTGTLPDGTVFDTNIQTSSKKKKNAKPLSFKVGVGKVIRGWDEALLTMSKGE 81 (119)
T ss_dssp SCSEEEEEEECCCSSCCCCTTCEEEEE-EEEECTTSCEEEECCCCSSSTTTTCCCEEEETTSSSSCHHHHHHHTTCCTTC
T ss_pred CCccEEEEEEcCCCCCcCCCCCEEEEE-EEEEECCCCEEEeccccccccccCCCCEEEEECCCChhHHHHHHHhCCCCCC
Confidence 345677889999996 58999999986 99999999999999753 4799999999999999999999999999
Q ss_pred EEEEEeCCCCCCCCCCCCC-CCCCCCeEEEEEEEeeee
Q psy5048 104 KRKLTIPPALAYGDRGAGN-VIPGGLSAVRQSEHSELE 140 (319)
Q Consensus 104 ~~~v~i~p~~ayG~~g~~~-~Ip~~~~l~feVeL~~v~ 140 (319)
++.|+|||+++||..+.++ .||||++|+|+|+|++|+
T Consensus 82 ~~~v~ip~~~aYG~~g~~~~~Ip~~~~l~f~veL~~i~ 119 (119)
T 3kz7_A 82 KARLEIEPEWAYGKKGQPDAKIPPNTKLIFEVELVDID 119 (119)
T ss_dssp EEEEEECGGGTTCTTCBGGGTBCTTCCEEEEEEEEEEC
T ss_pred EEEEEECcHHhcCCCCCCCCccCcCCeEEEEEEEEEeC
Confidence 9999999999999999865 699999999999999974
No 11
>2y78_A Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase, virulence; HET: SO4 GOL; 0.91A {Burkholderia pseudomallei} PDB: 2ke0_A 2ko7_A* 2l2s_A* 4dz2_A* 4dz3_A*
Probab=99.89 E-value=1.1e-22 Score=168.55 Aligned_cols=110 Identities=35% Similarity=0.537 Sum_probs=101.5
Q ss_pred eecccceEEEEeecCcCCCCCCCCcEEEEEEEEEEeCCcEEeeeccCCCCeEEeeCCCcccccHhHhhhccccCcEEEEE
Q psy5048 29 SLSPYSLSLILPRRAENLKPYVNVKICVSSFKPTFKLTLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLT 108 (319)
Q Consensus 29 ~~d~~lv~~~i~~~G~G~~p~~~~~v~v~~y~~~l~dg~v~d~s~~~~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~~v~ 108 (319)
.-....+.+.++++|.|..|..++.|+++ |++++.||++||+++..++|+.|.+|.+.+|+||+++|.+|++||+++|+
T Consensus 24 ~~~~~gl~~~~l~~G~G~~~~~gd~V~v~-Y~g~~~dG~~fdss~~~~~p~~f~lG~g~vi~G~eeaL~gmk~Ge~~~v~ 102 (133)
T 2y78_A 24 VTTESGLKYEDLTEGSGAEARAGQTVSVH-YTGWLTDGQKFDSSKDRNDPFAFVLGGGMVIKGWDEGVQGMKVGGVRRLT 102 (133)
T ss_dssp EECTTSCEEEEEECCSSCBCCTTSEEEEE-EEEEETTSCEEEETTTTTCCEEEETTSSSSCHHHHHHSTTCBTTCEEEEE
T ss_pred EECCCCEEEEEEEcCCCCCCCCCCEEEEE-EEEEECCCCEEeccCcCCCCEEEEeCCCChhHHHHHHHcCCCCCCEEEEE
Confidence 44556677888999999999999999986 99999999999999877789999999999999999999999999999999
Q ss_pred eCCCCCCCCCCCCCCCCCCCeEEEEEEEeee
Q psy5048 109 IPPALAYGDRGAGNVIPGGLSAVRQSEHSEL 139 (319)
Q Consensus 109 i~p~~ayG~~g~~~~Ip~~~~l~feVeL~~v 139 (319)
|||+++||..+.++.||||++|+|+|+|++|
T Consensus 103 ip~~~aYG~~~~~~~Ipp~~~l~f~VeL~~I 133 (133)
T 2y78_A 103 IPPQLGYGARGAGGVIPPNATLVFEVELLDV 133 (133)
T ss_dssp ECGGGTTTTTCBTTTBCTTCCEEEEEEEEEC
T ss_pred ECcHHhCCCCCCCCCCCCCCeEEEEEEEEEC
Confidence 9999999999988889999999999999975
No 12
>3o5q_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 0.96A {Homo sapiens} PDB: 3o5m_A 3o5l_A 3o5o_A 3o5p_A 3o5r_A* 4drk_A* 4drm_A* 4drn_A* 4dro_A* 4drp_A* 4drq_A* 3o5j_A 3o5g_A 3o5i_A 3o5k_A
Probab=99.89 E-value=8.7e-23 Score=168.01 Aligned_cols=107 Identities=32% Similarity=0.483 Sum_probs=99.7
Q ss_pred ceEEEEeecCcCC-CCCCCCcEEEEEEEEEEeCCcEEeeeccCCCCeEEeeCCCcccccHhHhhhccccCcEEEEEeCCC
Q psy5048 34 SLSLILPRRAENL-KPYVNVKICVSSFKPTFKLTLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPA 112 (319)
Q Consensus 34 lv~~~i~~~G~G~-~p~~~~~v~v~~y~~~l~dg~v~d~s~~~~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~~v~i~p~ 112 (319)
.+.+.++++|.|. .|..++.|+++ |++++.||++|++++..+.|+.|.+|.+++|+||+++|.+|++||+++|+|||+
T Consensus 20 gv~~~i~~~G~G~~~p~~gd~V~v~-Y~g~~~dG~~fdss~~~~~p~~f~lG~g~~i~G~e~~l~gm~~Ge~~~v~ip~~ 98 (128)
T 3o5q_A 20 GVLKIVKRVGNGEETPMIGDKVYVH-YKGKLSNGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKKGEICHLLCKPE 98 (128)
T ss_dssp SEEEEEEECCSSSCCCCTTCEEEEE-EEEEETTSCEEEEHHHHTSCEEEETTSSSSCHHHHHHHTTCCTTCEEEEEECGG
T ss_pred CEEEEEEECCCCCccCCCCCEEEEE-EEEEECCCCEEEecCCCCCCEEEEECCCCccHHHHHHHhcCCCCCEEEEEEChH
Confidence 4667789999997 68899999886 999999999999998878899999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCeEEEEEEEeeeee
Q psy5048 113 LAYGDRGAGNVIPGGLSAVRQSEHSELEI 141 (319)
Q Consensus 113 ~ayG~~g~~~~Ip~~~~l~feVeL~~v~~ 141 (319)
++||..+.++.||||++|+|+|+|++|+.
T Consensus 99 ~aYG~~g~~~~Ip~~~~l~f~vel~~i~~ 127 (128)
T 3o5q_A 99 YAYGSAGSLPKIPSNATLFFEIELLDFKG 127 (128)
T ss_dssp GTTTTTCBTTTBCTTCCEEEEEEEEEEEC
T ss_pred HcCCCCCCCCCcCCCCEEEEEEEEEEecC
Confidence 99999998888999999999999999874
No 13
>1jvw_A Macrophage infectivity potentiator; chagas disease, X-RAY rotamase, isomeras; 1.70A {Trypanosoma cruzi} SCOP: d.26.1.1
Probab=99.89 E-value=5.7e-23 Score=176.64 Aligned_cols=123 Identities=25% Similarity=0.320 Sum_probs=108.7
Q ss_pred eecccceEEEEeecCcCCC-CCCCCcEEEEEEEEEEeCCcEEeeeccCCCCeEEeeCCCcccccHhHhhhccccCcEEEE
Q psy5048 29 SLSPYSLSLILPRRAENLK-PYVNVKICVSSFKPTFKLTLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKL 107 (319)
Q Consensus 29 ~~d~~lv~~~i~~~G~G~~-p~~~~~v~v~~y~~~l~dg~v~d~s~~~~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~~v 107 (319)
......+.+.+++.|.|.. |..++.|+++ |++++.||++||+++.++.|+.|.+ +++|+||+++|.+|++|++++|
T Consensus 33 ~~~~sGl~~~vl~~G~G~~~~~~gd~V~v~-Y~g~l~dG~~fdss~~~g~p~~f~l--g~vI~G~eeaL~gMk~Ge~~~~ 109 (167)
T 1jvw_A 33 VKLPSGLVFQRIARGSGKRAPAIDDKCEVH-YTGRLRDGTVFDSSRERGKPTTFRP--NEVIKGWTEALQLMREGDRWRL 109 (167)
T ss_dssp EECTTSCEEEEEECCCCSBCCCTTCCEEEE-EEEECTTSCEEEEHHHHTSCEEECG--GGSCHHHHHHHTTCCTTCEEEE
T ss_pred EECCCCEEEEEEEcCCCCcCCCCCCEEEEE-EEEEECCCCEEeeccccCCCEEEEe--CchhHHHHHHHcCCCCCCEEEE
Confidence 4456678888999999998 9999999996 9999999999999988778999999 5899999999999999999999
Q ss_pred EeCCCCCCCCCCCCCCCCCCCeEEEEEEEeeeeeccchhhccCccccchh
Q psy5048 108 TIPPALAYGDRGAGNVIPGGLSAVRQSEHSELEISTKFFLELIPNKFLHW 157 (319)
Q Consensus 108 ~i~p~~ayG~~g~~~~Ip~~~~l~feVeL~~v~~~~~~~~~m~~eek~~~ 157 (319)
+|||+++||..+.++.||||++|+|+|+|++|.+.+ |.++.+|..+.
T Consensus 110 ~Ip~~laYG~~g~~~~Ipp~s~LiF~VeL~~i~~~~---~~~~~~e~~~~ 156 (167)
T 1jvw_A 110 FIPYDLAYGVTGGGGMIPPYSPLEFDVELISIKDGG---KGRTAEEVDEI 156 (167)
T ss_dssp EECGGGTTTTTCSSSSSCTTCCEEEEEEEEEEGGGC---CSCBHHHHHHH
T ss_pred EECchhhCCCCCCCCCcCCCCeEEEEEEEEEEEcCC---CCCCHHHHHHH
Confidence 999999999999888899999999999999999643 55666554443
No 14
>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A
Probab=99.88 E-value=1.7e-22 Score=187.29 Aligned_cols=129 Identities=20% Similarity=0.353 Sum_probs=113.5
Q ss_pred cccCCCCCCCCCCCCCCCCCCeeecccceEEE---------------EeecCcCC-CCCCCCcEEEEEEEEEEeCCcEEe
Q psy5048 7 LPFGENRNPFYKTPCIRPRSTLSLSPYSLSLI---------------LPRRAENL-KPYVNVKICVSSFKPTFKLTLVAM 70 (319)
Q Consensus 7 ~~~g~~g~~~~~~p~Ipp~atl~~d~~lv~~~---------------i~~~G~G~-~p~~~~~v~v~~y~~~l~dg~v~d 70 (319)
++||..|+| |.||||++|.|+++++++. ++++|.|. .|..++.|+++ |++++ ||++|+
T Consensus 131 ~aYG~~g~~----~~Ip~~~~lvf~Vel~~i~~~~~~~~~d~gl~~~il~~G~G~~~~~~gd~V~i~-y~g~~-dG~~fd 204 (280)
T 1q1c_A 131 YAYGSAGSP----PKIPPNATLVFEVELFEFKGEDLTEEEDGGIIRRIQTRGEGYAKPNEGAIVEVA-LEGYY-KDKLFD 204 (280)
T ss_dssp GTTTTTCBT----TTBCTTCCEEEEEEEEEEECEECCTTCSSSEEEEEEECCSCSCCCCTTCEEEEE-EEEEE-TTEEEE
T ss_pred HhCCCcCcc----CCCCCCCcEEEEEEeeeecccccccccccceeEEeeecccccccccCCceEEEE-EEEEe-CCEEEe
Confidence 579999987 7999999999999988764 56778887 57888888886 99998 999999
Q ss_pred eeccCCCCeEEeeCCCc---ccccHhHhhhccccCcEEEEEeCCCCCCCCCCCCCC-CCCCCeEEEEEEEeeeeeccchh
Q psy5048 71 RIHDRDQPFTFTLGVGQ---VIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNV-IPGGLSAVRQSEHSELEISTKFF 146 (319)
Q Consensus 71 ~s~~~~~p~~f~lG~~~---~i~Gle~al~~Mk~GE~~~v~i~p~~ayG~~g~~~~-Ip~~~~l~feVeL~~v~~~~~~~ 146 (319)
++ |+.|.+|.+. +|+||+++|.+|++||++.|+|||+++||..+.+.+ ||||++++|+|+|++|+.+++.
T Consensus 205 ~~-----~~~f~lG~g~~~~~i~G~e~~l~gmk~Ge~~~v~ip~~~~yG~~~~~~~~IP~~~~l~f~V~L~~i~~~~~~- 278 (280)
T 1q1c_A 205 QR-----ELRFEIGEGENLDLPYGLERAIQRMEKGEHSIVYLKPSYAFGSVGKEKFQIPPNAELKYELHLKSFEKAKES- 278 (280)
T ss_dssp EE-----EEEEETTCGGGGTCCHHHHHHHTTCCTTCEEEEEECGGGTTTTTCBGGGTBCTTCCEEEEEEEEEEECCCC--
T ss_pred cC-----CeEEEecCCcccccchhHHHHHhCCCCCcEEEEEEChhHcCCcCCCccCccCCCCeEEEEEEEEEEeCCCCC-
Confidence 73 8999999987 599999999999999999999999999999987664 9999999999999999977643
Q ss_pred h
Q psy5048 147 L 147 (319)
Q Consensus 147 ~ 147 (319)
|
T Consensus 279 W 279 (280)
T 1q1c_A 279 W 279 (280)
T ss_dssp -
T ss_pred C
Confidence 5
No 15
>2lgo_A FKBP; infectious disease, isomerase, giardiasis, ssgcid, structura genomics, seattle structural genomics center for infectious; NMR {Giardia lamblia}
Probab=99.88 E-value=1.4e-22 Score=167.35 Aligned_cols=100 Identities=38% Similarity=0.610 Sum_probs=94.4
Q ss_pred EeecCcCCC-CCCCCcEEEEEEEEEEeCCcEEeeeccCCCCeEEeeCCCcccccHhHhhhccccCcEEEEEeCCCCCCCC
Q psy5048 39 LPRRAENLK-PYVNVKICVSSFKPTFKLTLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGD 117 (319)
Q Consensus 39 i~~~G~G~~-p~~~~~v~v~~y~~~l~dg~v~d~s~~~~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~~v~i~p~~ayG~ 117 (319)
++++|+|.. |..++.|+++ |++++.||++|++++..+.|+.|.+|.+++++||+++|.+|++||++.|.|||+++||.
T Consensus 30 ~l~~G~G~~~~~~gd~V~v~-Y~g~~~dG~~fdss~~~~~p~~f~lG~g~vi~G~e~aL~gm~~Ge~~~v~ip~~~aYG~ 108 (130)
T 2lgo_A 30 VLTPGDGVTKPQAGKKVTVH-YDGRFPDGKQFDSSRSRGKPFQFTLGAGEVIKGWDQGVATMTLGEKALFTIPYQLAYGE 108 (130)
T ss_dssp EEECCCSSCCCCTTSEEEEE-EEEECTTSCEEECTTTTTCCEEEETTSTTSCHHHHHHHHHSCTTEEEEEEECTTTSTTT
T ss_pred EEeccCCCccCCCCCEEEEE-EEEEECCCCEEEccCcCCCCEEEEeCCCCccHHHHHHHhCCCCCCEEEEEECcHHHCCC
Confidence 688999987 9999999986 99998899999999887789999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCeEEEEEEEeee
Q psy5048 118 RGAGNVIPGGLSAVRQSEHSEL 139 (319)
Q Consensus 118 ~g~~~~Ip~~~~l~feVeL~~v 139 (319)
.+.++.||||++|+|+|+|++|
T Consensus 109 ~~~~~~Ip~~~~l~f~VeL~~i 130 (130)
T 2lgo_A 109 RGYPPVIPPKATLVFEVELLAV 130 (130)
T ss_dssp TCCSTTSCSSCCEEEEEEEEEC
T ss_pred CCCCCCcCCCCeEEEEEEEEEC
Confidence 9988889999999999999875
No 16
>3uf8_A Ubiquitin-like protein SMT3, peptidyl-prolyl CIS- isomerase; ssgcid, seattle structural genomics center for in disease; HET: FK5; 1.50A {Burkholderia pseudomallei} PDB: 4ggq_C* 3vaw_A* 3uqa_A* 4g50_A* 4fn2_A* 3uqb_A* 4giv_A* 1euv_B 3v60_A 3v61_A 3v62_A*
Probab=99.88 E-value=4e-22 Score=177.37 Aligned_cols=115 Identities=34% Similarity=0.507 Sum_probs=107.5
Q ss_pred CCCCeeecccceEEEEeecCcCCCCCCCCcEEEEEEEEEEeCCcEEeeeccCCCCeEEeeCCCcccccHhHhhhccccCc
Q psy5048 24 PRSTLSLSPYSLSLILPRRAENLKPYVNVKICVSSFKPTFKLTLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGE 103 (319)
Q Consensus 24 p~atl~~d~~lv~~~i~~~G~G~~p~~~~~v~v~~y~~~l~dg~v~d~s~~~~~p~~f~lG~~~~i~Gle~al~~Mk~GE 103 (319)
.+++.......+.+.+++.|+|..|..++.|+++ |++++.||++|++++..+.|+.|.+|.+.+|+||+++|.+|++||
T Consensus 95 Gg~t~~~~~sGl~~~vl~~G~G~~~~~gd~V~v~-Y~g~l~dG~~fdss~~~~~P~~f~lG~g~vi~G~eeaL~gM~~Ge 173 (209)
T 3uf8_A 95 GGSTVVTTESGLKYEDLTEGSGAEARAGQTVSVH-YTGWLTDGQKFDSSKDRNDPFAFVLGGGMVIKGWDEGVQGMKVGG 173 (209)
T ss_dssp TCCCCEECTTSCEEEEEECCCSCBCCTTCEEEEE-EEEEETTSCEEEESGGGTCCEEEETTSSSSCHHHHHHHTTCBTTC
T ss_pred ccccccCCCCceEEEEEEcCCCCcCCCCCEEEEE-EEEEECCCCEEEEccccCCCEEEEeCCCccchhHHHHHhCCCCCC
Confidence 4566677778888999999999999999999986 999999999999999888899999999999999999999999999
Q ss_pred EEEEEeCCCCCCCCCCCCCCCCCCCeEEEEEEEeee
Q psy5048 104 KRKLTIPPALAYGDRGAGNVIPGGLSAVRQSEHSEL 139 (319)
Q Consensus 104 ~~~v~i~p~~ayG~~g~~~~Ip~~~~l~feVeL~~v 139 (319)
++.|.|||++|||..+.++.||||++|+|+|+|++|
T Consensus 174 ~~~v~Ipp~~aYG~~g~~~~IP~~s~LvF~VeL~~I 209 (209)
T 3uf8_A 174 VRRLTIPPQLGYGARGAAGVIPPNATLVFEVELLDV 209 (209)
T ss_dssp EEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEC
T ss_pred EEEEEECcHHhCCCCCCCCCcCCCCeEEEEEEEEEC
Confidence 999999999999999998889999999999999985
No 17
>1r9h_A FKB-6, FK506 binding protein family; structural genomics, peptidylprolyl isomerase, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: d.26.1.1
Probab=99.88 E-value=3.8e-22 Score=165.76 Aligned_cols=108 Identities=31% Similarity=0.512 Sum_probs=100.2
Q ss_pred cceEEEEeecCcCC-CCCCCCcEEEEEEEEEEeCCcEEeeeccCCCCeEEeeCCCcccccHhHhhhccccCcEEEEEeCC
Q psy5048 33 YSLSLILPRRAENL-KPYVNVKICVSSFKPTFKLTLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPP 111 (319)
Q Consensus 33 ~lv~~~i~~~G~G~-~p~~~~~v~v~~y~~~l~dg~v~d~s~~~~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~~v~i~p 111 (319)
..+.+.++++|.|. .|..++.|+++ |++++.||++|++++.++.|+.|.+|.+++|+||+++|.+|++||++.|+|||
T Consensus 14 ~gl~~~~l~~G~g~~~~~~gd~V~v~-Y~g~~~dG~~fdss~~~~~p~~f~lG~~~vi~G~e~~l~gm~~Ge~~~v~ip~ 92 (135)
T 1r9h_A 14 GGVLKLIKKEGQGVVKPTTGTTVKVH-YVGTLENGTKFDSSRDRGDQFSFNLGRGNVIKGWDLGVATMTKGEVAEFTIRS 92 (135)
T ss_dssp SSEEEEEEECCBSSCCCCTTCEEEEE-EEEEETTSCEEEEHHHHTSCEEEETTTTSSCHHHHHHHTTCCBTCEEEEEECG
T ss_pred CcEEEEEEEccCCCcCCCCCCEEEEE-EEEEECCCCEEEecCcCCCCEEEEeCCCCccHHHHHHHhcCCCCCEEEEEECh
Confidence 35677889999997 68888989886 99999899999999876789999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCeEEEEEEEeeeee
Q psy5048 112 ALAYGDRGAGNVIPGGLSAVRQSEHSELEI 141 (319)
Q Consensus 112 ~~ayG~~g~~~~Ip~~~~l~feVeL~~v~~ 141 (319)
+++||..+.++.||++++|+|+|+|++|..
T Consensus 93 ~~aYG~~g~~~~Ip~~~~l~f~v~l~~i~~ 122 (135)
T 1r9h_A 93 DYGYGDAGSPPKIPGGATLIFEVELFEWSA 122 (135)
T ss_dssp GGTTTTTCBTTTBCTTCCEEEEEEEEEEEC
T ss_pred HHcCCCCCCCCCcCcCCcEEEEEEEEEeec
Confidence 999999998888999999999999999985
No 18
>4dip_A Peptidyl-prolyl CIS-trans isomerase FKBP14; structural genomics, structural genomics consortium, SGC, PE prolyl CIS-trans isomerase; 1.82A {Homo sapiens}
Probab=99.87 E-value=5e-22 Score=162.66 Aligned_cols=109 Identities=34% Similarity=0.540 Sum_probs=98.3
Q ss_pred ccceEEEEeecCc--CCCCCCCCcEEEEEEEEEEe-CCcEEeeecc--CCCCeEEeeCCCcccccHhHhhhccccCcEEE
Q psy5048 32 PYSLSLILPRRAE--NLKPYVNVKICVSSFKPTFK-LTLVAMRIHD--RDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRK 106 (319)
Q Consensus 32 ~~lv~~~i~~~G~--G~~p~~~~~v~v~~y~~~l~-dg~v~d~s~~--~~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~~ 106 (319)
...+.+.+++.|. |..|..++.|+++ |++++. ||++|++++. .+.|+.|.+|.+++|+||+++|.+|++||++.
T Consensus 11 ~~gl~~~~l~~g~~~g~~~~~gd~V~v~-Y~g~~~~dG~~fdss~~~~~~~p~~f~lG~~~~i~G~e~~l~gm~~Ge~~~ 89 (125)
T 4dip_A 11 EPEVKIEVLQKPFICHRKTKGGDLMLVH-YEGYLEKDGSLFHSTHKHNNGQPIWFTLGILEALKGWDQGLKGMCVGEKRK 89 (125)
T ss_dssp CCCCEEEEEECCSCCSCCCCTTCEEEEE-EEEEETTTCCEEEEHHHHTTTCCEEEETTSCSSCHHHHHHSTTCCTTCEEE
T ss_pred CCCeEEEEEEcCCCCCCcCCCCCEEEEE-EEEEECCCCcEEEEcccCCCCcCEEEEeCCCChhHHHHHHHhCCCCCCEEE
Confidence 3456677788888 7889999999986 999998 9999999974 46799999999999999999999999999999
Q ss_pred EEeCCCCCCCCCCCCCCCCCCCeEEEEEEEeeeeec
Q psy5048 107 LTIPPALAYGDRGAGNVIPGGLSAVRQSEHSELEIS 142 (319)
Q Consensus 107 v~i~p~~ayG~~g~~~~Ip~~~~l~feVeL~~v~~~ 142 (319)
|.|||++|||..+.+ .||||++|+|+|+|++|+..
T Consensus 90 ~~ip~~~aYG~~g~~-~Ip~~~~l~f~vel~~i~~~ 124 (125)
T 4dip_A 90 LIIPPALGYGKEGKG-KIPPESTLIFNIDLLEIRNG 124 (125)
T ss_dssp EEECGGGTTTTTCBT-TBCTTCCEEEEEEEEEEECC
T ss_pred EEEChHHhcCCCCCC-CCCCCCeEEEEEEEEEEEcC
Confidence 999999999999966 79999999999999999853
No 19
>2vn1_A 70 kDa peptidylprolyl isomerase; FKBP, FK506, TPR repeat; HET: FK5; 2.35A {Plasmodium falciparum} PDB: 2ofn_A 2ki3_A 3ihz_A* 3ni6_A 3pa7_A
Probab=99.87 E-value=7.3e-22 Score=162.58 Aligned_cols=106 Identities=28% Similarity=0.438 Sum_probs=96.1
Q ss_pred eEEEEeecC---cCCCCCCCCcEEEEEEEEEE-eCCcEEeeeccCCCCeEEeeCCCcccccHhHhhhccccCcEEEEEeC
Q psy5048 35 LSLILPRRA---ENLKPYVNVKICVSSFKPTF-KLTLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIP 110 (319)
Q Consensus 35 v~~~i~~~G---~G~~p~~~~~v~v~~y~~~l-~dg~v~d~s~~~~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~~v~i~ 110 (319)
+...+++.| .|..|..++.|+++ |++++ .||++|++++.++.|+.|.+|.+.+|+||+++|.+|++||++.|+||
T Consensus 18 ~~~~il~~G~~g~g~~~~~gd~V~v~-Y~g~~~~dG~~fd~s~~~~~p~~f~lG~g~~i~g~e~~l~gm~~Ge~~~v~ip 96 (129)
T 2vn1_A 18 VIKTILKKGDEGEENIPKKGNEVTVH-YVGKLESTGKVFDSSFDRNVPFKFHLEQGEVIKGWDICVSSMRKNEKCLVRIE 96 (129)
T ss_dssp EEEEEEECCCCSGGGSCCTTCEEEEE-EEEEETTTCCEEEEGGGTTCCEEEETTSSSSCHHHHHHHTTCCTTCEEEEEEC
T ss_pred EEEEEEeCCCCCCCCcCCCCCEEEEE-EEEEECCCCeEEEecCCCCccEEEEeCCCCcCHHHHHHHhCCCCCCEEEEEEC
Confidence 334567754 56789999999986 99998 89999999988778999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCeEEEEEEEeeeee
Q psy5048 111 PALAYGDRGAGNVIPGGLSAVRQSEHSELEI 141 (319)
Q Consensus 111 p~~ayG~~g~~~~Ip~~~~l~feVeL~~v~~ 141 (319)
|+++||..+.++.||||++|+|+|+|++|..
T Consensus 97 ~~~aYG~~~~~~~Ip~~~~l~f~vel~~v~~ 127 (129)
T 2vn1_A 97 SMYGYGDEGCGESIPGNSVLLFEIELLSFRE 127 (129)
T ss_dssp GGGTTTTTCBTTTBCTTCCEEEEEEEEEEEC
T ss_pred hHHcCCCCCCCCCcCCCCeEEEEEEEEEEec
Confidence 9999999998778999999999999999985
No 20
>3b7x_A FK506-binding protein 6; isomerase, repeat, rotamase, TPR repeat, williams-beuren syndrome, structural genomics consortium, SGC; 2.10A {Homo sapiens}
Probab=99.87 E-value=1.8e-22 Score=167.54 Aligned_cols=109 Identities=18% Similarity=0.199 Sum_probs=93.4
Q ss_pred cccceEEEEeecCcCCCCCCCCcEEEEEEEEEEe-CCcEEeeeccCCCCeEEeeCCCcccccHhHhhhccccCcEEEEEe
Q psy5048 31 SPYSLSLILPRRAENLKPYVNVKICVSSFKPTFK-LTLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTI 109 (319)
Q Consensus 31 d~~lv~~~i~~~G~G~~p~~~~~v~v~~y~~~l~-dg~v~d~s~~~~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~~v~i 109 (319)
....+.+.++++|.|..+..++.|+++ |++++. ||++|++++..+.|+.|.+|.+.+|+||+++|.+|++||++.|+|
T Consensus 24 ~~~gl~~~vl~~G~g~~~~~gd~V~v~-Y~g~l~~~G~~fdss~~~~~p~~f~lG~g~~i~G~e~aL~gm~~Ge~~~v~i 102 (134)
T 3b7x_A 24 GDRGVLKDVIREGAGDLVAPDASVLVK-YSGYLEHMDRPFDSNYFRKTPRLMKLGEDITLWGMELGLLSMRRGELARFLF 102 (134)
T ss_dssp SSSSEEEEEEECCEEEECCTTCEEEEE-EEEECTTCSSCSEEC-------CEEC-CCCCCHHHHHHHHTCEETCEEEEEE
T ss_pred CCCCEEEEEEEcCCCCCCCCCCEEEEE-EEEEECCCCeEEEecCCCCCCEEEEcCCcchhHHHHHHHhCCCCCCEEEEEE
Confidence 345677888999999988888888886 999988 599999998777899999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCeEEEEEEEeeee
Q psy5048 110 PPALAYGDRGAGNVIPGGLSAVRQSEHSELE 140 (319)
Q Consensus 110 ~p~~ayG~~g~~~~Ip~~~~l~feVeL~~v~ 140 (319)
||+++||..+.++.||||++|+|+|+|++|+
T Consensus 103 p~~~aYG~~~~~~~Ip~~~~l~f~VeL~~i~ 133 (134)
T 3b7x_A 103 KPNYAYGTLGCPPLIPPNTTVLFEIELLDFL 133 (134)
T ss_dssp CGGGTTTTTCBTTTBCTTCCEEEEEEEEEEC
T ss_pred CHHHCcCCCCCCCCcCcCCeEEEEEEEEEEe
Confidence 9999999999888899999999999999986
No 21
>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A
Probab=99.87 E-value=3.1e-22 Score=191.46 Aligned_cols=127 Identities=22% Similarity=0.348 Sum_probs=90.7
Q ss_pred cccCCCCCCCCCCCCCCCCCCeeecccceEEE--------------EeecCcC-CCCCCCCcEEEEEEEEEEeCCcEEee
Q psy5048 7 LPFGENRNPFYKTPCIRPRSTLSLSPYSLSLI--------------LPRRAEN-LKPYVNVKICVSSFKPTFKLTLVAMR 71 (319)
Q Consensus 7 ~~~g~~g~~~~~~p~Ipp~atl~~d~~lv~~~--------------i~~~G~G-~~p~~~~~v~v~~y~~~l~dg~v~d~ 71 (319)
++||+.|.+ |.||||++|.|++++++|. ++++|.| .+|..++.|.+| |++++.||++|++
T Consensus 91 ~aYG~~g~~----~~Ip~~~~l~f~vel~~~~~~~di~~D~~~~k~i~~~G~g~~~p~~g~~V~v~-y~g~l~dgt~~~~ 165 (356)
T 3jxv_A 91 LAYGESGSP----PTIPANATLQFDVELLSWTSVRDIAKDGGIFKKILKEGDKWENPKDPDEVFVK-YEARLEDGTVVSK 165 (356)
T ss_dssp -------------------------------CCEEETTSSSSEEEEEEECCBSSCCCCTTCEEEEE-EEEEETTSCEEEE
T ss_pred HhCCCCCCC----CCcCCCCEEEEEeeEEeeecccccccCceeEEEEEecCcccCCCCCCCEEEEE-EEEEECCCCEEec
Confidence 589999988 8999999999999999983 5677887 589999999996 9999999999998
Q ss_pred eccCCCCeEEeeCCCcccccHhHhhhccccCcEEEEEeCCCCCCCCCCCCC-----CCCCCCeEEEEEEEeeeeec
Q psy5048 72 IHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGN-----VIPGGLSAVRQSEHSELEIS 142 (319)
Q Consensus 72 s~~~~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~~v~i~p~~ayG~~g~~~-----~Ip~~~~l~feVeL~~v~~~ 142 (319)
+. ++.|.+|.+.+++||+.+|.+|++||++.|+|+|+++||..|.+. .|||+++|+|+|+|++|...
T Consensus 166 ~~----~~~f~~g~~~v~~gl~~~l~~m~~GE~~~~~v~p~~~yg~~G~~~~~~~~~ip~~~~l~~~vel~~~~~v 237 (356)
T 3jxv_A 166 SE----GVEFTVKDGHLCPALAKAVKTMKKGEKVLLAVKPQYGFGEMGRPAAGEGGAVPPNASLVIDLELVSWKTV 237 (356)
T ss_dssp EE----EEEEEGGGCSSSHHHHHHHTTCCBTCEEEEEECGGGTTTTTCBCCCC--CCBCTTCCEEEEEEEEEEECE
T ss_pred cC----CEEEEeCCCCcchHHHHHHhhCCCCCEEEEEEChHhhcCCCCCCcccccccCCCCcEEEEEEEEEEEecc
Confidence 73 699999999999999999999999999999999999999998754 59999999999999999753
No 22
>2jwx_A FKBP38NTD, FK506-binding protein 8 variant; apoptosis, beta barrel, central helix, with flexible N-terminal extension, isomerase; NMR {Homo sapiens}
Probab=99.87 E-value=1.4e-21 Score=166.33 Aligned_cols=108 Identities=19% Similarity=0.166 Sum_probs=97.5
Q ss_pred ecccc-eEEEEeecCcCC--CCCCCCcEEEEEEEEEEeCCcEEeeeccCCCCeEEeeCCCcccccHhHhhhccccCcEEE
Q psy5048 30 LSPYS-LSLILPRRAENL--KPYVNVKICVSSFKPTFKLTLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRK 106 (319)
Q Consensus 30 ~d~~l-v~~~i~~~G~G~--~p~~~~~v~v~~y~~~l~dg~v~d~s~~~~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~~ 106 (319)
..... +.+.++++|.|. .|..++.|+++ |++++.||++||++ .|++|.+|.+++|+||+++|.+|++||+++
T Consensus 39 ~~~sG~v~~~vl~~G~G~~~~p~~gd~V~v~-Y~g~l~dG~~fds~----~p~~f~lG~g~vi~G~eeaL~gMk~Ge~~~ 113 (157)
T 2jwx_A 39 ILGNGLLRKKTLVPGPPGSSRPVKGQVVTVH-LQTSLENGTRVQEE----PELVFTLGDCDVIQALDLSVPLMDVGETAM 113 (157)
T ss_dssp SSSSSSEEEEEEECCSTTSCCCCTTEEEEEE-EEEECTTSCEEEEE----EEEEEETTTTSSCHHHHHHTTTSCTTCEEE
T ss_pred ECCCCCEEEEEEEccCCCccCCCCCCEEEEE-EEEEECCCCEeecC----CCEEEEeCCCChhHHHHHHHcCCCCCCEEE
Confidence 33444 478899999997 88889988886 99999999999984 589999999999999999999999999999
Q ss_pred EEeCCCCCCCCCC-CCCCCCCCCeEEEEEEEeeeeec
Q psy5048 107 LTIPPALAYGDRG-AGNVIPGGLSAVRQSEHSELEIS 142 (319)
Q Consensus 107 v~i~p~~ayG~~g-~~~~Ip~~~~l~feVeL~~v~~~ 142 (319)
|+|||+++||..+ ..+.||||++|+|+|+|++|...
T Consensus 114 v~IP~~~aYG~~g~~~~~IPp~stLiF~VeL~~i~~~ 150 (157)
T 2jwx_A 114 VTADSKYCYGPQGSRSPYIPPHAALCLEVTLKTAVDL 150 (157)
T ss_dssp EEECGGGTTTTTCCSSSCCCTTCCEEEEEEEEEEEEC
T ss_pred EEECchhcCCcccccCCCcCCCCeEEEEEEEEEEEcc
Confidence 9999999999999 66679999999999999999864
No 23
>3oe2_A Peptidyl-prolyl CIS-trans isomerase; FKBP, ppiase, FK506; HET: TAR SRT; 1.60A {Pseudomonas syringae PV} SCOP: d.26.1.0
Probab=99.86 E-value=1.5e-21 Score=174.27 Aligned_cols=106 Identities=26% Similarity=0.330 Sum_probs=99.1
Q ss_pred eecccceEEEEeecCcCCCCCCCCcEEEEEEEEEEeCCcEEeeeccCCCCeEEeeCCCcccccHhHhhhccccCcEEEEE
Q psy5048 29 SLSPYSLSLILPRRAENLKPYVNVKICVSSFKPTFKLTLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLT 108 (319)
Q Consensus 29 ~~d~~lv~~~i~~~G~G~~p~~~~~v~v~~y~~~l~dg~v~d~s~~~~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~~v~ 108 (319)
......+.+.++++|+|..|..++.|+++ |++++.||++||+| +.|++|.+| ++|+||+++|.+|++|++++|+
T Consensus 113 ~~~~sGl~y~vl~~G~G~~p~~gd~V~V~-Y~g~l~dG~vfDss---~~P~~f~lG--~vI~G~eeaL~gMk~Gek~~v~ 186 (219)
T 3oe2_A 113 KELADGILMTELTPGTGPKPDANGRVEVR-YVGRLPDGKIFDQS---TQPQWFRLD--SVISGWTSALQNMPTGAKWRLV 186 (219)
T ss_dssp EECGGGCEEEEEECCCSCCCCTTSEEEEE-EEEECTTSCEEEEC---SSCEEEEGG--GSCHHHHHHHTTCCTTCEEEEE
T ss_pred EECCCCeEEEEEecCCCccCCCCCEEEEE-EEEEECCCCEeecc---CCcEEEEec--chhHHHHHHHhCCCCCCEEEEE
Confidence 45567788899999999999999999996 99999999999998 679999997 8999999999999999999999
Q ss_pred eCCCCCCCCCCCCCCCCCCCeEEEEEEEeeee
Q psy5048 109 IPPALAYGDRGAGNVIPGGLSAVRQSEHSELE 140 (319)
Q Consensus 109 i~p~~ayG~~g~~~~Ip~~~~l~feVeL~~v~ 140 (319)
|||+++||..|.++.||||++|+|+|+|++|+
T Consensus 187 IPp~lAYG~~g~~~~IPpnstLvFeVeLl~Ik 218 (219)
T 3oe2_A 187 IPSDQAYGAEGAGDLIDPFTPLVFEIELIAVS 218 (219)
T ss_dssp ECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEE
T ss_pred ECchhcCCCCCCCCCCCCCCeEEEEEEEEEEe
Confidence 99999999999988899999999999999986
No 24
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.86 E-value=3.6e-21 Score=188.84 Aligned_cols=110 Identities=31% Similarity=0.466 Sum_probs=83.5
Q ss_pred ccceEEEEeecCcCCC-CCCCCcEEEEEEEEEEeCCcEEeeeccCCCCeEEeeCCCcccccHhHhhhccccCcEEEEEeC
Q psy5048 32 PYSLSLILPRRAENLK-PYVNVKICVSSFKPTFKLTLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIP 110 (319)
Q Consensus 32 ~~lv~~~i~~~G~G~~-p~~~~~v~v~~y~~~l~dg~v~d~s~~~~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~~v~i~ 110 (319)
...+.+.++++|.|.. |..|+.|++| |++++.||++|++|+..+.|+.|.+|.+.+|+||+++|.+|++||++.|+||
T Consensus 30 ~~g~~~~~~~~G~g~~~~~~gd~v~v~-y~~~~~~g~~~dss~~~~~p~~~~~g~~~~i~g~~~~l~~m~~Ge~~~~~i~ 108 (457)
T 1kt0_A 30 DRGVLKIVKRVGNGEETPMIGDKVYVH-YKGKLSNGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKRGEICHLLCK 108 (457)
T ss_dssp ---CEEEC--------CCCBTCEEEEE-EEEEC-----CBC------CEEEETTSTTSCHHHHHHHTTCCTTCEEEEEEC
T ss_pred CCcEEEEEEECCCCCCCCCCCCEEEEE-EEEEECCCCEEeccCCCCCCeEEEeCCcchhhHHHHHHhhCCCCCEEEEEEC
Confidence 4467788899999987 9999999996 9999989999999988888999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCeEEEEEEEeeeeec
Q psy5048 111 PALAYGDRGAGNVIPGGLSAVRQSEHSELEIS 142 (319)
Q Consensus 111 p~~ayG~~g~~~~Ip~~~~l~feVeL~~v~~~ 142 (319)
|+++||..|.++.|||+++++|+|+|++|...
T Consensus 109 ~~~~yg~~g~~~~i~~~~~l~~~v~l~~~~~~ 140 (457)
T 1kt0_A 109 PEYAYGSAGSLPKIPSNATLFFEIELLDFKGE 140 (457)
T ss_dssp GGGTTTTTCBTTTBCTTCCEEEEEEEEEEECE
T ss_pred hHHhccccCCCCCCCCCCcEEEEEeeceeecc
Confidence 99999999988889999999999999999753
No 25
>1fd9_A Protein (macrophage infectivity potentiator prote; FKBP domain, long alpha helix, dimerisation VIA helical INTE isomerase; 2.41A {Legionella pneumophila} SCOP: d.26.1.1 PDB: 2uz5_A 2vcd_A*
Probab=99.86 E-value=2.7e-21 Score=172.33 Aligned_cols=110 Identities=23% Similarity=0.345 Sum_probs=101.6
Q ss_pred eecccceEEEEeecCcCCCCCCCCcEEEEEEEEEEeCCcEEeeeccCCCCeEEeeCCCcccccHhHhhhccccCcEEEEE
Q psy5048 29 SLSPYSLSLILPRRAENLKPYVNVKICVSSFKPTFKLTLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLT 108 (319)
Q Consensus 29 ~~d~~lv~~~i~~~G~G~~p~~~~~v~v~~y~~~l~dg~v~d~s~~~~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~~v~ 108 (319)
...+..+.+.++++|.|..|..++.|++| |++++.||++||+++.++.|++|.+ +.+|+||+++|.+|++|++++|+
T Consensus 102 ~~~~sGl~y~vl~~G~G~~p~~gD~V~V~-Y~g~l~dG~vfdss~~~g~p~~f~l--g~vI~G~eeaL~gMk~Gek~~v~ 178 (213)
T 1fd9_A 102 VVLPSGLQYKVINSGNGVKPGKSDTVTVE-YTGRLIDGTVFDSTEKTGKPATFQV--SQVIPGWTEALQLMPAGSTWEIY 178 (213)
T ss_dssp EECTTSCEEEEEECCCSCCCCTTCEEEEE-EEEEETTSCEEEEHHHHCSCEEEEG--GGSCHHHHHHHTTCCTTCEEEEE
T ss_pred EECCCccEEEEEecCCCccCCCCCEEEEE-EEEEECCCCEEeeccccCCCEEEEc--CchhhHHHHHHcCCCCCCEEEEE
Confidence 44566778888999999999999999996 9999999999999988788999999 58999999999999999999999
Q ss_pred eCCCCCCCCCCCCCCCCCCCeEEEEEEEeeeee
Q psy5048 109 IPPALAYGDRGAGNVIPGGLSAVRQSEHSELEI 141 (319)
Q Consensus 109 i~p~~ayG~~g~~~~Ip~~~~l~feVeL~~v~~ 141 (319)
|||+++||..+.++.||||++|+|+|+|++|.+
T Consensus 179 IP~~laYG~~g~~~~Ipp~stLiF~VeLl~v~~ 211 (213)
T 1fd9_A 179 VPSGLAYGPRSVGGPIGPNETLIFKIHLISVKK 211 (213)
T ss_dssp ECGGGTTTTCCCSSSCCTTCCEEEEEEEEEEEC
T ss_pred ECchhccCccCCCCCCCCCCeEEEEEEEEEEEc
Confidence 999999999998778999999999999999974
No 26
>2pbc_A FK506-binding protein 2; endoplasmic reticulum, isomerase, polymorphism, rotamase, structural genomics, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.86 E-value=1.8e-21 Score=153.56 Aligned_cols=97 Identities=42% Similarity=0.680 Sum_probs=90.0
Q ss_pred CCCCCCCCcEEEEEEEEEEeCCcEEeeeccCCCCeEEeeCCCcccccHhHhhhccccCcEEEEEeCCCCCCCCCCCCCCC
Q psy5048 45 NLKPYVNVKICVSSFKPTFKLTLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVI 124 (319)
Q Consensus 45 G~~p~~~~~v~v~~y~~~l~dg~v~d~s~~~~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~~v~i~p~~ayG~~g~~~~I 124 (319)
|..|..++.|+++ |++++.||++|++++..+.|+.|.+|.+++++||+++|.+|++||+++|+|||+++||..+.++.|
T Consensus 3 g~~~~~gd~V~v~-y~~~~~dG~~~d~s~~~~~p~~f~lG~~~~i~g~~~~l~gm~~Ge~~~v~ip~~~ayG~~~~~~~I 81 (102)
T 2pbc_A 3 PIKSRKGDVLHMH-YTGKLEDGTEFDSSLPQNQPFVFSLGTGQVIKGWDQGLLGMCEGEKRKLVIPSELGYGERGAPPKI 81 (102)
T ss_dssp CCCCCTTCEEEEE-EEEECTTSCEEEESTTTTCCEEEETTSSSSCHHHHTTSTTCCTTCEEEEEECGGGTTTTTCBTTTB
T ss_pred CCcCCCCCEEEEE-EEEEECCCCEEEeCCCCCCCEEEEeCCCCccHHHHHHHhCCCCCCEEEEEECHHHCcCCCCCCCCc
Confidence 4567888888886 999988999999998777899999999999999999999999999999999999999999987789
Q ss_pred CCCCeEEEEEEEeeeeec
Q psy5048 125 PGGLSAVRQSEHSELEIS 142 (319)
Q Consensus 125 p~~~~l~feVeL~~v~~~ 142 (319)
||+++|+|+|+|++|...
T Consensus 82 p~~~~l~f~v~l~~v~~~ 99 (102)
T 2pbc_A 82 PGGATLVFEVELLKIERR 99 (102)
T ss_dssp CTTCCEEEEEEEEEEGGG
T ss_pred CcCCeEEEEEEEEEeccc
Confidence 999999999999999853
No 27
>1u79_A FKBP-type peptidyl-prolyl CIS-trans isomerase 3; TFKBP13, FK-506 binding protein; 1.85A {Arabidopsis thaliana} SCOP: d.26.1.1 PDB: 1y0o_A
Probab=99.85 E-value=1.2e-21 Score=161.51 Aligned_cols=111 Identities=37% Similarity=0.534 Sum_probs=100.7
Q ss_pred eeecccceEEEEeecCcCCCCCCCCcEEEEEEEEEEeCCcEEeeeccCCCCeEEeeCCCcccccHhHhhhc------ccc
Q psy5048 28 LSLSPYSLSLILPRRAENLKPYVNVKICVSSFKPTFKLTLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTE------MCV 101 (319)
Q Consensus 28 l~~d~~lv~~~i~~~G~G~~p~~~~~v~v~~y~~~l~dg~v~d~s~~~~~p~~f~lG~~~~i~Gle~al~~------Mk~ 101 (319)
.......+.+.+++.|.|..|..++.|+++ |++++.||++|++++.+++|+.|.+|.+++|+||+++|.+ |++
T Consensus 7 ~~~~~~Gl~~~~l~~G~G~~~~~gd~V~v~-Y~g~~~dG~~fdss~~~~~p~~f~lG~~~~i~G~~~~L~G~~~~~~m~~ 85 (129)
T 1u79_A 7 FSVSPSGLAFCDKVVGYGPEAVKGQLIKAH-YVGKLENGKVFDSSYNRGKPLTFRIGVGEVIKGWDQGILGSDGIPPMLT 85 (129)
T ss_dssp CEECTTSCEEEEEECCSSCBCCTTCEEEEE-EEEECTTSCEEEEHHHHTSCEEEETTSSSSCHHHHHHHHCBTTBCCCBT
T ss_pred cEECCCCeEEEEEEcCCCCCCCCCCEEEEE-EEEEECCCCEEEecCCCCCCEEEEeCCCCccHHHHHHhcccccccccCC
Confidence 344556788889999999999999999996 9999989999999987678999999999999999999998 999
Q ss_pred CcEEEEEeCCCCCCCCCCCC-----CCCCCCCeEEEEEEEeee
Q psy5048 102 GEKRKLTIPPALAYGDRGAG-----NVIPGGLSAVRQSEHSEL 139 (319)
Q Consensus 102 GE~~~v~i~p~~ayG~~g~~-----~~Ip~~~~l~feVeL~~v 139 (319)
||+++|.|||+++||..+.. +.||||++|+|+|+|++|
T Consensus 86 Ge~~~v~ip~~~aYG~~~~~~~~~~~~Ip~~~~l~f~vel~~i 128 (129)
T 1u79_A 86 GGKRTLRIPPELAYGDRGAGCKGGSCLIPPASVLLFDIEYIGK 128 (129)
T ss_dssp TCEEEEEECGGGTTGGGCEEEETTEEEECTTCCEEEEEEEEEE
T ss_pred CCEEEEEEChHHccCCCCCCccccCCcCCCCCeEEEEEEEEEe
Confidence 99999999999999998863 469999999999999986
No 28
>2awg_A 38 kDa FK-506 binding protein; FKBP-type, ppiase, BCL-2 inhibitor, SHH signalling antagonist, structural genomics consortium, SGC; 1.60A {Homo sapiens} PDB: 2f2d_A 3ey6_A
Probab=99.85 E-value=6.1e-21 Score=154.68 Aligned_cols=107 Identities=19% Similarity=0.188 Sum_probs=96.5
Q ss_pred eecccc-eEEEEeecCcCC--CCCCCCcEEEEEEEEEEeCCcEEeeeccCCCCeEEeeCCCcccccHhHhhhccccCcEE
Q psy5048 29 SLSPYS-LSLILPRRAENL--KPYVNVKICVSSFKPTFKLTLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKR 105 (319)
Q Consensus 29 ~~d~~l-v~~~i~~~G~G~--~p~~~~~v~v~~y~~~l~dg~v~d~s~~~~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~ 105 (319)
...... +.+.++++|.|. .|..++.|+++ |++++.||++|+++ .|+.|.+|.+++++||+++|.+|++||++
T Consensus 8 ~~~~~g~~~~~vl~~G~G~~~~~~~gd~V~v~-y~g~~~dG~~~ds~----~p~~f~lG~~~~i~g~e~~l~gm~~Ge~~ 82 (118)
T 2awg_A 8 DILGNGLLRKKTLVPGPPGSSRPVKGQVVTVH-LQTSLENGTRVQEE----PELVFTLGDCDVIQALDLSVPLMDVGETA 82 (118)
T ss_dssp ESSSSSSEEEEEEECCCTTCCCCCTTSEEEEE-EEEECTTSCEEEEE----EEEEEETTSSCSCHHHHHHGGGSCTTCEE
T ss_pred EECCCCCEEEEEEEcCCCCCccCCCCCEEEEE-EEEEECCCCEEECC----CCEEEEECCCChhHHHHHHHhCCCCCCEE
Confidence 334444 677889999997 78889999886 99998899999984 58999999999999999999999999999
Q ss_pred EEEeCCCCCCCCCCCCCCCCCCCeEEEEEEEeeee
Q psy5048 106 KLTIPPALAYGDRGAGNVIPGGLSAVRQSEHSELE 140 (319)
Q Consensus 106 ~v~i~p~~ayG~~g~~~~Ip~~~~l~feVeL~~v~ 140 (319)
+|+|||+++||..+.++.||||++|+|+|+|++|+
T Consensus 83 ~~~ip~~~ayG~~~~~~~Ip~~~~l~f~v~l~~v~ 117 (118)
T 2awg_A 83 MVTADSKYCYGPQGRSPYIPPHAALCLEVTLKTAV 117 (118)
T ss_dssp EEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEE
T ss_pred EEEEChHHccCCCCCCCccCCCCeEEEEEEEEEec
Confidence 99999999999999877899999999999999986
No 29
>1q6h_A FKBP-type peptidyl-prolyl CIS-trans isomerase FKP; chaperone, peptidyl-prolyl isomerase, heat shock protein, FK family; HET: MSE; 1.97A {Escherichia coli} SCOP: d.26.1.1 PDB: 1q6i_A* 1q6u_A
Probab=99.85 E-value=5.9e-21 Score=171.27 Aligned_cols=107 Identities=30% Similarity=0.432 Sum_probs=99.2
Q ss_pred ecccceEEEEeecCcCCCCCCCCcEEEEEEEEEEeCCcEEeeeccCCCCeEEeeCCCcccccHhHhhhccccCcEEEEEe
Q psy5048 30 LSPYSLSLILPRRAENLKPYVNVKICVSSFKPTFKLTLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTI 109 (319)
Q Consensus 30 ~d~~lv~~~i~~~G~G~~p~~~~~v~v~~y~~~l~dg~v~d~s~~~~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~~v~i 109 (319)
..+..+.+.++++|.|..|..++.|++| |++++.||++||+++.++.|++|.+ +.+|+||+++|.+|++|++++|+|
T Consensus 118 ~~~sGl~y~vl~~G~G~~p~~gD~V~V~-Y~g~l~dG~vfdss~~~g~p~~f~l--g~vI~G~eeaL~gMk~Gek~~v~I 194 (224)
T 1q6h_A 118 TSSTGLVYQVVEAGKGEAPKDSDTVVVN-YKGTLIDGKEFDNSYTRGEPLSFRL--DGVIPGWTEGLKNIKKGGKIKLVI 194 (224)
T ss_dssp ECTTSCEEEEEECCSSCCCCTTCEEEEE-EEEEETTSCEEEEGGGGTSCEEEEG--GGSCHHHHHHGGGSCTTCEEEEEE
T ss_pred ECCCceEEEEEecccCccccCCCEEEEE-EEEEeCCCCEEeeccccCCCEEEEc--CCcchhHHHHHcCCCCCCEEEEEE
Confidence 3466778889999999999999999996 9999999999999998888999999 589999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCeEEEEEEEeeee
Q psy5048 110 PPALAYGDRGAGNVIPGGLSAVRQSEHSELE 140 (319)
Q Consensus 110 ~p~~ayG~~g~~~~Ip~~~~l~feVeL~~v~ 140 (319)
||+++||..+.++ ||||++|+|+|+|++|+
T Consensus 195 P~~laYG~~g~~~-IPp~stLiF~VeL~~ik 224 (224)
T 1q6h_A 195 PPELAYGKAGVPG-IPPNSTLVFDVELLDVK 224 (224)
T ss_dssp CGGGTTTTTCBTT-BCTTCCEEEEEEEEEEC
T ss_pred CchhhcCcCCCCC-CCCCCEEEEEEEEEEeC
Confidence 9999999999876 99999999999999874
No 30
>2d9f_A FK506-binding protein 8 variant; FKBP, rapamycin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.84 E-value=1.3e-20 Score=156.51 Aligned_cols=110 Identities=18% Similarity=0.171 Sum_probs=98.5
Q ss_pred eecccc-eEEEEeecCcCC--CCCCCCcEEEEEEEEEEeCCcEEeeeccCCCCeEEeeCCCcccccHhHhhhccccCcEE
Q psy5048 29 SLSPYS-LSLILPRRAENL--KPYVNVKICVSSFKPTFKLTLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKR 105 (319)
Q Consensus 29 ~~d~~l-v~~~i~~~G~G~--~p~~~~~v~v~~y~~~l~dg~v~d~s~~~~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~ 105 (319)
...... +.+.++++|.|. .|..++.|+++ |++++.||++|+++ .|+.|.+|.+++|+||+++|.+|++||++
T Consensus 12 ~~~~~g~l~~~vl~~G~G~~~~~~~gd~V~v~-Y~g~~~dG~~fds~----~p~~f~lG~g~~i~G~e~~L~gm~~Ge~~ 86 (135)
T 2d9f_A 12 DILGNGLLRKKTLVPGPPGSSRPVKGQVVTVH-LQTSLENGTRVQEE----PELVFTLGDCDVIQALDLSVPLMDVGETA 86 (135)
T ss_dssp ESSSSSSSEEEEEECCCSSCCCCCTTSEEEEE-EEEEESSSCEEEEE----EEEEEETTSCCSCTTTTTTGGGSCTTCEE
T ss_pred EECCCCCEEEEEEEcCCCCCccCCCCCEEEEE-EEEEECCCCEEecC----CCEEEEeCCCChhHHHHHHHhCCCCCCEE
Confidence 334444 678889999997 88899989886 99999999999973 58999999999999999999999999999
Q ss_pred EEEeCCCCCCCCCC-CCCCCCCCCeEEEEEEEeeeeecc
Q psy5048 106 KLTIPPALAYGDRG-AGNVIPGGLSAVRQSEHSELEIST 143 (319)
Q Consensus 106 ~v~i~p~~ayG~~g-~~~~Ip~~~~l~feVeL~~v~~~~ 143 (319)
.|+|||+++||..+ .++.||||++|+|+|+|++|...+
T Consensus 87 ~v~ip~~~aYG~~~~~~~~Ip~~~~l~f~vel~~v~~~~ 125 (135)
T 2d9f_A 87 MVTADSKYCYGPQGSRSPYIPPHAALCLEVTLKTAVDRP 125 (135)
T ss_dssp EEEECHHHHTCTTCCSSSCCCTTCCEEEEEEEEEEESSC
T ss_pred EEEEChhHccCcCCcCCCccCCCCeEEEEEEEEEeecCC
Confidence 99999999999998 666799999999999999999755
No 31
>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A
Probab=99.82 E-value=6.5e-20 Score=169.95 Aligned_cols=130 Identities=26% Similarity=0.361 Sum_probs=111.3
Q ss_pred cceEEEEeecCcCCC-CCCCCcEEEEEEEEEEeCCcEEeeeccCCCCeEEeeCCCcccccHhHhhhccccCcEEEEEeCC
Q psy5048 33 YSLSLILPRRAENLK-PYVNVKICVSSFKPTFKLTLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPP 111 (319)
Q Consensus 33 ~lv~~~i~~~G~G~~-p~~~~~v~v~~y~~~l~dg~v~d~s~~~~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~~v~i~p 111 (319)
..+.+.++++|.|.. |..++.|+++ |++++.||++|++++.++.|+.|.+|.+.+|+||+++|.+|++||++.|+|||
T Consensus 51 ~gl~~~vl~~G~G~~~~~~gd~V~v~-Y~g~~~dG~~fdss~~~~~p~~f~lG~g~vi~G~e~aL~gm~~Ge~~~v~ipp 129 (280)
T 1q1c_A 51 EGVLKVIKREGTGTEMPMIGDRVFVH-YTGWLLDGTKFDSSLDRKDKFSFDLGKGEVIKAWDIAIATMKVGEVCHITCKP 129 (280)
T ss_dssp SSEEEEEEECCSSSCCCCTTCEEEEE-EEEEETTSCEEEESTTSSSCEEEETTTTSSCHHHHHHHTTCCTTCEEEEEECG
T ss_pred CceEEEEEeCCCCCcCCCCCCEEEEE-EEEEECCCCEEEecccCCCCEEEEECCcChhHHHHHHHhcCCCCCEEEEEECc
Confidence 357788999999987 9999999986 99999999999999887789999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCeEEEEEEEeeeeeccchhhccCccccchhhhhhhhcCCcc
Q psy5048 112 ALAYGDRGAGNVIPGGLSAVRQSEHSELEISTKFFLELIPNKFLHWDRRFTQKGPMA 168 (319)
Q Consensus 112 ~~ayG~~g~~~~Ip~~~~l~feVeL~~v~~~~~~~~~m~~eek~~~a~~~ke~Gn~~ 168 (319)
+++||..+.++.||++++|+|+|+|++|... ++.+..+..+..+....|+..
T Consensus 130 ~~aYG~~g~~~~Ip~~~~lvf~Vel~~i~~~-----~~~~~~d~gl~~~il~~G~G~ 181 (280)
T 1q1c_A 130 EYAYGSAGSPPKIPPNATLVFEVELFEFKGE-----DLTEEEDGGIIRRIQTRGEGY 181 (280)
T ss_dssp GGTTTTTCBTTTBCTTCCEEEEEEEEEEECE-----ECCTTCSSSEEEEEEECCSCS
T ss_pred HHhCCCcCccCCCCCCCcEEEEEEeeeeccc-----ccccccccceeEEeeeccccc
Confidence 9999999988889999999999999999853 234434444544444555543
No 32
>1hxv_A Trigger factor; FKBP fold, ppiase, chaperone; NMR {Mycoplasma genitalium} SCOP: d.26.1.1
Probab=99.62 E-value=5.8e-16 Score=124.57 Aligned_cols=87 Identities=17% Similarity=0.205 Sum_probs=73.9
Q ss_pred CCCCCCCCcEEEEEEEEEEeCCcEEeeeccCCCCeEEeeCCCcccccHhHhhhccccCcEEEEEeCCCCCCCCCCCCCCC
Q psy5048 45 NLKPYVNVKICVSSFKPTFKLTLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVI 124 (319)
Q Consensus 45 G~~p~~~~~v~v~~y~~~l~dg~v~d~s~~~~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~~v~i~p~~ayG~~g~~~~I 124 (319)
+..+..++.|+++ |++++ ||++||+++ +.|+.|.+|.+++|+||+++|.+|++||++.|.|+++..||..+.
T Consensus 27 ~~~~~~gD~V~v~-Y~g~~-dG~~fdss~--~~p~~f~lG~g~vi~G~ee~L~Gmk~Ge~~~v~i~fP~~Yg~~~~---- 98 (113)
T 1hxv_A 27 DKKLANGDIAIID-FTGIV-DNKKLASAS--AQNYELTIGSNSFIKGFETGLIAMKVNQKKTLALTFPSDYHVKEL---- 98 (113)
T ss_dssp --CCCSSEEEEEE-EEEEE-TTEECSTTC--CSEEEEEETSSCSCTTHHHHHHTSCSSEEEEECCCCCTTSSSSGG----
T ss_pred CCCCCCCCEEEEE-EEEEE-CCEEcccCC--ccCEEEEECCCChhHHHHHHHCCCCCCCEEEEEEeCchhhCcCCC----
Confidence 3456777878875 99998 999999985 579999999999999999999999999999999984444998764
Q ss_pred CCCCeEEEEEEEeeee
Q psy5048 125 PGGLSAVRQSEHSELE 140 (319)
Q Consensus 125 p~~~~l~feVeL~~v~ 140 (319)
++++++|+|+|++|+
T Consensus 99 -~g~~l~F~V~l~~Vk 113 (113)
T 1hxv_A 99 -QSKPVTFEVVLKAIK 113 (113)
T ss_dssp -GSCCCEEEEEECCBC
T ss_pred -CCCEEEEEEEEEEEC
Confidence 469999999999874
No 33
>4dt4_A FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer; FKBP domain, IF domain, chaperone, peptidyl-prolyl isomerase isomerase; 1.35A {Escherichia coli}
Probab=99.61 E-value=8.2e-16 Score=131.98 Aligned_cols=72 Identities=24% Similarity=0.366 Sum_probs=66.6
Q ss_pred CCCCCCcEEEEEEEEEEeCCcEEeeeccCCCCeEEeeCCCcccccHhHhhhccccCcEEEEEeCCCCCCCCCC
Q psy5048 47 KPYVNVKICVSSFKPTFKLTLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRG 119 (319)
Q Consensus 47 ~p~~~~~v~v~~y~~~l~dg~v~d~s~~~~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~~v~i~p~~ayG~~g 119 (319)
.+..++.|+++ |++++.||++||+|+..++|+.|.+|.+++|+||+++|.+|++||++.|+|||++|||..+
T Consensus 24 ~i~~gd~V~v~-Y~g~l~dG~vfDss~~~~~P~~f~lG~g~vipG~eeaL~gm~~Ge~~~v~Ipp~~AYG~~~ 95 (169)
T 4dt4_A 24 SVQSNSAVLVH-FTLKLDDGTTAESTRNNGKPALFRLGDASLSEGLEQHLLGLKVGDKTTFSLEPDAAFGVPS 95 (169)
T ss_dssp SCCTTCEEEEE-EEEEETTSCEEEEHHHHTSCEEEETTSSSSCHHHHHHHTTCCTTCEEEEEECGGGTTCCCC
T ss_pred cCCCCCEEEEE-EEEEECCCCEEEecCCCCCCEEEEECCCCccHHHHHHHcCCCCCCEEEEEEChHHhcCCCC
Confidence 46678888886 9999999999999988778999999999999999999999999999999999999999865
No 34
>3pr9_A FKBP-type peptidyl-prolyl CIS-trans isomerase; FKBP protein, chaperone; 1.95A {Methanocaldococcus jannaschii} SCOP: d.26.1.0 PDB: 3pra_A
Probab=99.58 E-value=3.3e-15 Score=126.81 Aligned_cols=71 Identities=27% Similarity=0.426 Sum_probs=64.1
Q ss_pred CCCCCcEEEEEEEEEEeCCcEEeeeccC-------------CCCeEEeeCCCcccccHhHhhhccccCcEEEEEeCCCCC
Q psy5048 48 PYVNVKICVSSFKPTFKLTLVAMRIHDR-------------DQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALA 114 (319)
Q Consensus 48 p~~~~~v~v~~y~~~l~dg~v~d~s~~~-------------~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~~v~i~p~~a 114 (319)
...++.|+++ |++++ ||++||+|+.. +.|+.|.+|.+++|+||+++|.+|++||++.|+|||++|
T Consensus 2 i~~Gd~V~v~-Y~g~l-dG~vfDss~~~~a~~~g~~~~~~~~~P~~f~vG~g~vi~G~eeaL~gm~~Ge~~~v~Ipp~~a 79 (157)
T 3pr9_A 2 VEKGKMVKIS-YDGYV-DGKLFDTTNEELAKKEGIYNPAMIYGPVAIFAGEGQVLPGLDEAILEMDVGEEREVVLPPEKA 79 (157)
T ss_dssp CCTTCEEEEE-EEEEE-TTEEEEESCHHHHHHHTCCCTTSCCSCEEEETTSSSSCHHHHHHHHHCCTTCEEEEEECGGGT
T ss_pred CCCCCEEEEE-EEEEE-CCEEEEeccccccccccccccccCCCCEEEEECCCcHHHHHHHHHcCCCCCCEEEEEECcHHh
Confidence 3567888886 99999 99999999763 369999999999999999999999999999999999999
Q ss_pred CCCCCC
Q psy5048 115 YGDRGA 120 (319)
Q Consensus 115 yG~~g~ 120 (319)
||..+.
T Consensus 80 YG~~~~ 85 (157)
T 3pr9_A 80 FGKRDP 85 (157)
T ss_dssp TCCCCG
T ss_pred cCCCCh
Confidence 998764
No 35
>2k8i_A SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase, chaperone, rotamase; NMR {Escherichia coli}
Probab=99.55 E-value=3.7e-14 Score=121.99 Aligned_cols=70 Identities=17% Similarity=0.296 Sum_probs=63.3
Q ss_pred CCCCCcEEEEEEEEEEeCCcEEeeeccCCCCeEEeeCCCcccccHhHhhhccccCcEEEEEeCCCCCCCCCC
Q psy5048 48 PYVNVKICVSSFKPTFKLTLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRG 119 (319)
Q Consensus 48 p~~~~~v~v~~y~~~l~dg~v~d~s~~~~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~~v~i~p~~ayG~~g 119 (319)
+..++.|+++ |++++.||++|++|+.. +|+.|.+|.+++|+||+++|.+|++|+++.|+|||+.+||..+
T Consensus 3 i~~gd~V~v~-Y~g~~~dG~~fdss~~~-~P~~f~lG~g~vipG~eeaL~Gm~~Ge~~~v~ippe~aYG~~~ 72 (171)
T 2k8i_A 3 VAKDLVVSLA-YQVRTEDGVLVDESPVS-APLDYLHGHGSLISGLETALEGHEVGDKFDVAVGANDAYGQYD 72 (171)
T ss_dssp CCTTEEEEEE-EEEEETTSCEEEECCSS-SCEEEETTSCSSCSHHHHHHTTCCTTCEEEEEEETTTSSCCCC
T ss_pred CCCCCEEEEE-EEEEECCCCEEeeccCC-cCEEEEECCCCcchHHHHHHcCCCCCCEEEEEECcHHhcCCCC
Confidence 4566777775 99998899999998753 6999999999999999999999999999999999999999885
No 36
>3prb_A FKBP-type peptidyl-prolyl CIS-trans isomerase; chaperone; 2.20A {Methanocaldococcus jannaschii} PDB: 3prd_A
Probab=99.54 E-value=2.2e-14 Score=128.84 Aligned_cols=93 Identities=23% Similarity=0.333 Sum_probs=79.8
Q ss_pred CCCCcEEEEEEEEEEeCCcEEeeeccC-------------CCCeEEeeCCCcccccHhHhhhccccCcEEEEEeCCCCCC
Q psy5048 49 YVNVKICVSSFKPTFKLTLVAMRIHDR-------------DQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAY 115 (319)
Q Consensus 49 ~~~~~v~v~~y~~~l~dg~v~d~s~~~-------------~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~~v~i~p~~ay 115 (319)
..|+.|+++ |++++ ||++||+|+.. +.|+.|.+|.+++|+||+++|.+|++|+++.|+|||++||
T Consensus 3 ~~Gd~V~v~-Y~g~l-dG~vfDss~~~~A~e~gi~~~~~~~~P~~f~lG~g~vIpG~eeaL~Gm~vGek~~v~Ippe~AY 80 (231)
T 3prb_A 3 EKGKMVKIS-YDGYV-DGKLFDTTNEELAKKEGIYNPAMIYGPVAIFAGEGQVLPGLDEAILEMDVGEEREVVLPPEKAF 80 (231)
T ss_dssp CTTCEEEEE-EEEEE-TTEEEEESCHHHHHHTTCCCTTSCCSCEEEETTSSSSCHHHHHHHHTCCTTCEEEEEECGGGTT
T ss_pred CCCCEEEEE-EEEEE-CCEEEEeccchhcccccccccccCCCCEEEEeCCCcHHHHHHHHHcCCCCCCEEEEEeCcHHhc
Confidence 467888886 99999 99999999753 3799999999999999999999999999999999999999
Q ss_pred CCCCCCC-------------C-------------------------------CCCCCeEEEEEEEeeeeecc
Q psy5048 116 GDRGAGN-------------V-------------------------------IPGGLSAVRQSEHSELEIST 143 (319)
Q Consensus 116 G~~g~~~-------------~-------------------------------Ip~~~~l~feVeL~~v~~~~ 143 (319)
|..+... . --++.+|.|+|+|++|....
T Consensus 81 Ge~~~~lv~~vp~~~f~~~~~~~~vG~~~~~~~~~g~V~~v~~~~V~vD~NHPLAGk~L~F~vev~~v~eat 152 (231)
T 3prb_A 81 GKRDPSKIKLIPLSEFTKRGIKPIKGLTITIDGIPGKIVSINSGRVLVDFNHELAGKEVKYRIKIEEVVDDK 152 (231)
T ss_dssp CCCCGGGEEEEETHHHHTTTCCCCTTCEEEETTEEEEEEEEETTEEEEECSCTTTTCCEEEEEEEEEECCSH
T ss_pred CCCChHHEEecCHHHCCcccCCCCCCcEEEecCCCEEEEEEcCCEEEEeCCCccCCCEEEEEEEEEEEecCC
Confidence 9876211 0 12688999999999998644
No 37
>2kr7_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLY; protein, rotamase; NMR {Helicobacter pylori}
Probab=99.53 E-value=3.1e-14 Score=120.16 Aligned_cols=72 Identities=19% Similarity=0.364 Sum_probs=64.6
Q ss_pred CCCCCCcEEEEEEEEEEe-CCcEEeeeccCCCCeEEeeCCCcccccHhHhhhccccCcEEEEEeCCCCCCCCCCC
Q psy5048 47 KPYVNVKICVSSFKPTFK-LTLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGA 120 (319)
Q Consensus 47 ~p~~~~~v~v~~y~~~l~-dg~v~d~s~~~~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~~v~i~p~~ayG~~g~ 120 (319)
.+..++.|+++ |++++. ||++|++|+. +.|+.|.+|.+++|+||+++|.+|++|+++.|+|||+++||..+.
T Consensus 6 ~i~~gd~V~v~-Y~g~~~~dG~~fdss~~-~~p~~f~~G~g~vipg~e~aL~gm~~Ge~~~v~ipp~~aYG~~~~ 78 (151)
T 2kr7_A 6 LESIKQAALIE-YEVREQGSSIVLDSNIS-KEPLEFIIGTNQIIAGLEKAVLKAQIGEWEEVVIAPEEAYGVYES 78 (151)
T ss_dssp CTTSCCEEEEE-EEEEESSCSCEEEESTT-TCCEEEETTCCCSCHHHHHHHTTCCBTCEEEEEECGGGTTCSSCS
T ss_pred CCCCCCEEEEE-EEEEECCCCCEEEeCCC-CcCEEEEECCCCccHHHHHHHcCCCCCCEEEEEEecHHHcCCCCc
Confidence 45677888886 999987 9999999975 369999999999999999999999999999999999999998753
No 38
>2kfw_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD; protein, cobalt, copper, cytoplasm, metal- binding, nickel, rotamase, zinc; NMR {Escherichia coli}
Probab=99.51 E-value=5.9e-14 Score=123.20 Aligned_cols=71 Identities=17% Similarity=0.292 Sum_probs=64.1
Q ss_pred CCCCCcEEEEEEEEEEeCCcEEeeeccCCCCeEEeeCCCcccccHhHhhhccccCcEEEEEeCCCCCCCCCCC
Q psy5048 48 PYVNVKICVSSFKPTFKLTLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGA 120 (319)
Q Consensus 48 p~~~~~v~v~~y~~~l~dg~v~d~s~~~~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~~v~i~p~~ayG~~g~ 120 (319)
+..++.|+++ |++++.||++|++|+.. +|++|.+|.+++||||+++|.+|++|+++.|+|||+++||..+.
T Consensus 3 i~~gd~V~v~-Y~g~~~dG~~fdss~~~-~P~~f~lG~g~vipG~eeaL~Gm~vGe~~~v~Ippe~aYGe~~~ 73 (196)
T 2kfw_A 3 VAKDLVVSLA-YQVRTEDGVLVDESPVS-APLDYLHGHGSLISGLETALEGHEVGDKFDVAVGANDAYGQYDE 73 (196)
T ss_dssp CCSSCEEEEE-EEEEETTTEEEEECCTT-SCCEEESSSSSSCHHHHHHHSSSCTTCEEEEECSTTTTSSCCCT
T ss_pred CCCCCEEEEE-EEEEECCCCEEEecCCC-CCEEEEECCCCcchHHHHHHcCCCCCCEEEEEeCcHHhcCCCCh
Confidence 4567888885 99998899999999753 69999999999999999999999999999999999999998753
No 39
>1ix5_A FKBP; ppiase, isomerase; NMR {Methanothermococcusthermolithotrophicus} SCOP: d.26.1.1
Probab=99.51 E-value=1.2e-14 Score=122.60 Aligned_cols=73 Identities=29% Similarity=0.491 Sum_probs=65.3
Q ss_pred CCCCCcEEEEEEEEEEeCCcEEeeecc-------------CCCCeEEeeCCCcccccHhHhhhccccCcEEEEEeCCCCC
Q psy5048 48 PYVNVKICVSSFKPTFKLTLVAMRIHD-------------RDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALA 114 (319)
Q Consensus 48 p~~~~~v~v~~y~~~l~dg~v~d~s~~-------------~~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~~v~i~p~~a 114 (319)
+..++.|+++ |++++.||++||+|+. ...|+.|.+|.+++|+||+++|.+|++|+++.|+|||++|
T Consensus 2 i~~gd~V~v~-Y~g~~~dG~~fdss~~~~a~~~g~~~~~~~~~P~~f~~G~g~vi~G~eeaL~gm~~Ge~~~v~ipp~~a 80 (151)
T 1ix5_A 2 VDKGVKIKVD-YIGKLESGDVFDTSIEEVAKEAGIYAPDREYEPLEFVVGEGQLIQGFEEAVLDMEVGDEKTVKIPAEKA 80 (151)
T ss_dssp CCTTCEEEEC-CEECCTTSCCCEESCHHHHHHHTCCCSSCCCCCEEEETTTTCSCHHHHHHHHTCCTTCCCEEEECTTTS
T ss_pred CCCCCEEEEE-EEEEECCCCEEEecchhhcccccccccccCCCCEEEEECCCChhHHHHHHHcCCCCCCEEEEEECcHHH
Confidence 4577888886 9999889999999974 3369999999999999999999999999999999999999
Q ss_pred CCCCCCC
Q psy5048 115 YGDRGAG 121 (319)
Q Consensus 115 yG~~g~~ 121 (319)
||..+..
T Consensus 81 YG~~~~~ 87 (151)
T 1ix5_A 81 YGNRNEM 87 (151)
T ss_dssp SCSCCST
T ss_pred CCCCCcc
Confidence 9987643
No 40
>3cgm_A SLYD, peptidyl-prolyl CIS-trans isomerase; chaperone function, two domain P rotamase; 2.41A {Thermus thermophilus} PDB: 3cgn_A 3luo_A*
Probab=99.41 E-value=5.1e-13 Score=113.49 Aligned_cols=65 Identities=17% Similarity=0.220 Sum_probs=59.2
Q ss_pred CCCCCcEEEEEEEEEEeCCcEEeeeccCCCCeEEeeCCCcccccHhHhhhccccCcEEEEEeCCCCCCCCCC
Q psy5048 48 PYVNVKICVSSFKPTFKLTLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRG 119 (319)
Q Consensus 48 p~~~~~v~v~~y~~~l~dg~v~d~s~~~~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~~v~i~p~~ayG~~g 119 (319)
+..++.|+++ |+++ .||++|++++ +.|.+|.+++|+||+++|.+|++||++.|+|||+++||..+
T Consensus 3 i~~gd~V~v~-Y~g~-~dG~~fdss~-----~~f~~G~g~vipG~e~aL~Gm~~Ge~~~v~ipp~~aYG~~~ 67 (158)
T 3cgm_A 3 VGQDKVVTIR-YTLQ-VEGEVLDQGE-----LSYLHGHRNLIPGLEEALEGREEGEAFQAHVPAEKAYGPHD 67 (158)
T ss_dssp CCTTEEEEEE-EEEE-ETTEEEEEEE-----EEEETTSSSSCHHHHHHHTTCBTTCEEEEEECGGGTTCCCC
T ss_pred CCCCCEEEEE-EEEE-ECCEEEEeeE-----EEEEECCCCcChHHHHHHcCCCCCCEEEEEECcHHHcCCCC
Confidence 3466777775 9999 8999999986 89999999999999999999999999999999999999865
No 41
>1w26_A Trigger factor, TF; chaperone, protein folding, ribosome associated protein, nascent chain, cell division, isomerase; 2.7A {Escherichia coli} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 2vrh_A 1w2b_5
Probab=99.40 E-value=8.1e-13 Score=129.24 Aligned_cols=102 Identities=16% Similarity=0.232 Sum_probs=86.0
Q ss_pred CCCCCCCCcEEEEEEEEEEeCCcEEeeeccCCCCeEEeeCCCcccccHhHhhhccccCcEEEEEeCCCCCCCCCCCCCCC
Q psy5048 45 NLKPYVNVKICVSSFKPTFKLTLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVI 124 (319)
Q Consensus 45 G~~p~~~~~v~v~~y~~~l~dg~v~d~s~~~~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~~v~i~p~~ayG~~g~~~~I 124 (319)
+..+..|+.|+++ |+++. ||++|++++ +.|+.|.+|.|.+||||+.+|.||++|+++.|.++++.+||..+.
T Consensus 155 ~~~~~~gD~V~i~-y~g~~-dG~~fd~~~--~~~~~~~lG~g~~ipgfee~L~G~k~Ge~~~v~v~~~~~yg~~~l---- 226 (432)
T 1w26_A 155 DGAVEAEDRVTID-FTGSV-DGEEFEGGK--ASDFVLAMGQGRMIPGFEDGIKGHKAGEEFTIDVTFPEEYHAENL---- 226 (432)
T ss_dssp SSCCCTTCEEEEC-EEEES-SSCBCSSCC--CSSEEEETTSCCSCTTHHHHSSSCCSSCEEEEEEECCTTCSCTTT----
T ss_pred CCCCCCCCEEEEE-EEEee-CCeEccCCC--ccceEEEeCCCCcchHHHHHhCCCCCCCEEEEEECCchhhCCCCC----
Confidence 4456777888875 99984 999999886 569999999999999999999999999999999999999998765
Q ss_pred CCCCeEEEEEEEeeeeeccchhhccCccccchhhhhh
Q psy5048 125 PGGLSAVRQSEHSELEISTKFFLELIPNKFLHWDRRF 161 (319)
Q Consensus 125 p~~~~l~feVeL~~v~~~~~~~~~m~~eek~~~a~~~ 161 (319)
++.+++|+|+|++|... -.|+-+.++++.+
T Consensus 227 -ag~~~~F~V~v~~v~~~------~lpeldDEfak~~ 256 (432)
T 1w26_A 227 -KGKAAKFAINLKKVEER------ELPELTAEFIKRF 256 (432)
T ss_dssp -SSCEEEEEEECCEECCE------ECCCCSHHHHTTT
T ss_pred -CCceEEEEEEEEEEecc------CCCCcchHHHHHh
Confidence 45899999999999842 2555566777655
No 42
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.38 E-value=2.1e-13 Score=113.27 Aligned_cols=138 Identities=12% Similarity=0.018 Sum_probs=96.9
Q ss_pred CccccchhhhhhhhcCCcccccchHHHHHHHHhhhhhcc------cCCcc-------hhHHHHHHHhhHHHHHHhcccch
Q psy5048 150 IPNKFLHWDRRFTQKGPMAKNREHIAHRARRDRGKRRIQ------SFKPH-------RAESEKLYAHCSSAYALLVKKTP 216 (319)
Q Consensus 150 ~~eek~~~a~~~ke~Gn~~~~~~~~~~~~~~~~~k~~~~------~~k~~-------~~~~~~l~~~~~~~~~~~~~~~~ 216 (319)
.+++++..+..+++.|+.++..+++..+...- .+.... ...|. +.....++.++-.|+..+..+..
T Consensus 3 ~~~e~~~~a~~~~~~G~~~~~~~~~~~A~~~y-~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~ 81 (162)
T 3rkv_A 3 AEDDKLKSVEALRQKGNELFVQKDYKEAIDAY-RDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHE 81 (162)
T ss_dssp -----CHHHHHHHHHHHHHHHTTCHHHHHHHH-HHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHH
T ss_pred ChHHHHHHHHHHHHHHHHHHHcCCHHHHHHHH-HHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHH
Confidence 35678889999999999999988886544311 111000 01111 11122334444447778899999
Q ss_pred hHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChh-hHHHHHHHHHHHHhHhHHHHHH
Q psy5048 217 SIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQS-QCLPLLGIRAQHQRGHMITQGS 287 (319)
Q Consensus 217 a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~-~i~~el~~l~~~~k~~~~kek~ 287 (319)
|+..|..++..+| +|++|+||+|..+..+++++ |++++|+|. ++..+|..|.++++++.+++++
T Consensus 82 A~~~~~~al~~~p-------~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~l~~~~~~~~~~~~~~k~ 154 (162)
T 3rkv_A 82 AEETSSEVLKREE-------TNEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAASVVAREMKIVTERRAEKKADSRV 154 (162)
T ss_dssp HHHHHHHHHHHST-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHTTSSCC
T ss_pred HHHHHHHHHhcCC-------cchHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999 99999999999888888886 999999999 9999999999999999999999
Q ss_pred HHHhcccC
Q psy5048 288 LYFFLFYN 295 (319)
Q Consensus 288 ~y~~mF~~ 295 (319)
+|++||++
T Consensus 155 ~~~~~f~~ 162 (162)
T 3rkv_A 155 TYSKMFQP 162 (162)
T ss_dssp --------
T ss_pred HHHHhcCC
Confidence 99999974
No 43
>1t11_A Trigger factor, TF; helix-turn-helix, four-helix-bundle, ppiase, chaperone; 2.50A {Vibrio cholerae} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 1l1p_A
Probab=99.22 E-value=8.5e-12 Score=120.55 Aligned_cols=101 Identities=15% Similarity=0.210 Sum_probs=83.2
Q ss_pred CCCCCCCcEEEEEEEEEEeCCcEEeeeccCCCCeEEeeCCCcccccHhHhhhccccCcEEEEEeCCCCCCCCCCCCCCCC
Q psy5048 46 LKPYVNVKICVSSFKPTFKLTLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIP 125 (319)
Q Consensus 46 ~~p~~~~~v~v~~y~~~l~dg~v~d~s~~~~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~~v~i~p~~ayG~~g~~~~Ip 125 (319)
..+..|+.|+++ |+++ .||++|+++. +.|+.|.+|.|.+||||+++|.||++|+++.|.|+++..||..+.
T Consensus 159 ~~~~~gD~V~i~-y~g~-~dG~~fd~~~--~~~~~~~lG~g~~ipgfee~L~Gmk~Ge~~~v~v~fp~dy~~~~l----- 229 (392)
T 1t11_A 159 EAAENGKRVSID-FVGS-IDGVEFEGGK--AENFPLEMGAGRMIPGFEDGIVGKTKGMEFVIDVTFPEDYHAENL----- 229 (392)
T ss_dssp CCCCTTCEEEEE-EEEE-SSSSCCTTCE--EEEEEEETTSCCBSTTSGGGTTTCCSSCCCCEEEECCTTCSCTTT-----
T ss_pred CCCCCCCEEEEE-EEEE-ECCEEccCCC--ccceEEEecCCCcchhHHHHhCCCCCCCEEEEEEeCccccccCCC-----
Confidence 346677777775 9998 4999999874 468999999999999999999999999999999997788987655
Q ss_pred CCCeEEEEEEEeeeeeccchhhccCccccchhhhhh
Q psy5048 126 GGLSAVRQSEHSELEISTKFFLELIPNKFLHWDRRF 161 (319)
Q Consensus 126 ~~~~l~feVeL~~v~~~~~~~~~m~~eek~~~a~~~ 161 (319)
+|.+++|+|+|++|... -.|+-+.++++.+
T Consensus 230 aGk~~~F~V~v~~i~~~------~lpeldDEfak~~ 259 (392)
T 1t11_A 230 KGKAAKFAIKVNKVEAR------ELPELNDEFVARF 259 (392)
T ss_dssp SSCEEEECCCEEEEEEE------ECCCCSTGGGGGG
T ss_pred CCCeEEEEEEEEEEEcC------CCCCcCHHHHHHh
Confidence 46999999999999853 2455556777654
No 44
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=98.87 E-value=2.3e-09 Score=91.55 Aligned_cols=157 Identities=4% Similarity=-0.108 Sum_probs=100.6
Q ss_pred EEEEeeeeeccchhhccCccccchhhhhhhhcCCcccccchHHHHHHHHhhhhhcc-cCCcc------h----hHHHHHH
Q psy5048 133 QSEHSELEISTKFFLELIPNKFLHWDRRFTQKGPMAKNREHIAHRARRDRGKRRIQ-SFKPH------R----AESEKLY 201 (319)
Q Consensus 133 eVeL~~v~~~~~~~~~m~~eek~~~a~~~ke~Gn~~~~~~~~~~~~~~~~~k~~~~-~~k~~------~----~~~~~l~ 201 (319)
...+..++... ..|+|+.+++...+......|+.++..+++..+...- .+.... +..+. . .....+.
T Consensus 14 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~-~~al~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (198)
T 2fbn_A 14 RENLYFQGAKK-SIYDYTDEEKVQSAFDIKEEGNEFFKKNEINEAIVKY-KEALDFFIHTEEWDDQILLDKKKNIEISCN 91 (198)
T ss_dssp --------CCC-SGGGCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHH-HHHHHTTTTCTTCCCHHHHHHHHHHHHHHH
T ss_pred hhhhhhccccC-chhhCCHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHH-HHHHHHHhcccccchhhHHHHHHHHHHHHH
Confidence 34445566555 5699999999999999999999998888886544311 111110 01000 0 0001233
Q ss_pred HhhHHHHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHH
Q psy5048 202 AHCSSAYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGI 273 (319)
Q Consensus 202 ~~~~~~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~ 273 (319)
..+-.++..+..+..|+..|..++..+| +|.+++|++|..+..+++++ +++++|++..+...|..
T Consensus 92 ~~la~~~~~~~~~~~A~~~~~~al~~~p-------~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~ 164 (198)
T 2fbn_A 92 LNLATCYNKNKDYPKAIDHASKVLKIDK-------NNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYEL 164 (198)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHST-------TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHH
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHhCc-------ccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHH
Confidence 3333456777999999999999999998 99999999999777778775 89999999999999999
Q ss_pred HHHHHhHhHHHHHHHHHhcccCCCC
Q psy5048 274 RAQHQRGHMITQGSLYFFLFYNMSS 298 (319)
Q Consensus 274 l~~~~k~~~~kek~~y~~mF~~~~~ 298 (319)
+..++.++.+.++..|+.||...+-
T Consensus 165 ~~~~~~~~~~~~~~~~~~~f~~~~~ 189 (198)
T 2fbn_A 165 CVNKLKEARKKDKLTFGGMFDKGPL 189 (198)
T ss_dssp HHHHHHHHHC---------------
T ss_pred HHHHHHHHHHHHHHHHHHHhcccch
Confidence 9999999999999999999997653
No 45
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=98.74 E-value=5.6e-09 Score=99.48 Aligned_cols=136 Identities=11% Similarity=0.009 Sum_probs=95.9
Q ss_pred ccccchhhhhhhhcCCcccccchHHHHHHHHhhhhhcc--------cCC---cchhHHHHHHHhhHHHHHHhcccchhHh
Q psy5048 151 PNKFLHWDRRFTQKGPMAKNREHIAHRARRDRGKRRIQ--------SFK---PHRAESEKLYAHCSSAYALLVKKTPSIH 219 (319)
Q Consensus 151 ~eek~~~a~~~ke~Gn~~~~~~~~~~~~~~~~~k~~~~--------~~k---~~~~~~~~l~~~~~~~~~~~~~~~~a~~ 219 (319)
.++....+......|+.++..+++..+...- .+.... ... ..+.....++.++-.++..+.++..|+.
T Consensus 216 ~~~~~~~a~~~~~~g~~~~~~g~~~~Ai~~y-~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~ 294 (370)
T 1ihg_A 216 VDKILLISEDLKNIGNTFFKSQNWEMAIKKY-TKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVD 294 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHH-HHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCHHHHHHHH-HHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHH
Confidence 4455556777888898888888776443211 111000 000 0011122233333346677799999999
Q ss_pred HHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHHhHhHHHHHHHHHh
Q psy5048 220 NCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQRGHMITQGSLYFF 291 (319)
Q Consensus 220 ~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~k~~~~kek~~y~~ 291 (319)
.|..+|+.+| +|.+|+|++|..+..+++++ |++++|++..+...|..+.++++++.++++++|++
T Consensus 295 ~~~~al~~~p-------~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~~~~~~l~~~~~~~~~~~~a~k~~~~k 367 (370)
T 1ihg_A 295 SCLEALEIDP-------SNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAELLKVKQKIKAQKDKEKAAYAK 367 (370)
T ss_dssp HHHHHHTTCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHCCC--
T ss_pred HHHHHHHhCc-------hhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999998 99999999999888788886 89999999999999999999999999999999999
Q ss_pred ccc
Q psy5048 292 LFY 294 (319)
Q Consensus 292 mF~ 294 (319)
||+
T Consensus 368 mf~ 370 (370)
T 1ihg_A 368 MFA 370 (370)
T ss_dssp ---
T ss_pred hhC
Confidence 995
No 46
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=98.43 E-value=3.7e-08 Score=83.44 Aligned_cols=124 Identities=11% Similarity=-0.097 Sum_probs=90.3
Q ss_pred cchhhhhhhhcCCcccccchHHHHHHHH-hhhhhcccC---Cc--chhHHHHHHHhhHHHHHHhcccchhHhHHhhhhcc
Q psy5048 154 FLHWDRRFTQKGPMAKNREHIAHRARRD-RGKRRIQSF---KP--HRAESEKLYAHCSSAYALLVKKTPSIHNCFLLSTK 227 (319)
Q Consensus 154 k~~~a~~~ke~Gn~~~~~~~~~~~~~~~-~~k~~~~~~---k~--~~~~~~~l~~~~~~~~~~~~~~~~a~~~c~~vl~~ 227 (319)
....+......||.++..+.|..+...- ......... .. ....-...+.+.-.+...+.++..|+..|..+|+.
T Consensus 7 ~~~~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l 86 (159)
T 2hr2_A 7 EVVGAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHY 86 (159)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHh
Confidence 3456778888999998888887544311 111111110 00 00011113444445778889999999999999998
Q ss_pred -------ccccccCCCCChhHH----HHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHHhHhHHH
Q psy5048 228 -------SMLTFARNQSTIPAW----THDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQRGHMIT 284 (319)
Q Consensus 228 -------~~l~~~~~~~NvKAL----fRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~k~~~~k 284 (319)
+| ++.||| ||||.++..++.++ |++++|+++.|..+|..+++++++..+|
T Consensus 87 ~n~~~e~~p-------d~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d~~~~~~~~~~~~~~~~~~~k 155 (159)
T 2hr2_A 87 FNRRGELNQ-------DEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERKGETPGKERMMEVAIDRIAQ 155 (159)
T ss_dssp HHHHCCTTS-------THHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCCSCCTTHHHHHHHHHHHHHH
T ss_pred hhccccCCC-------chHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 88 999999 99999998888886 9999999999999999999999988765
No 47
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=98.32 E-value=4.8e-07 Score=72.31 Aligned_cols=106 Identities=11% Similarity=0.130 Sum_probs=79.4
Q ss_pred hhhhhhhhcCCcccccchHHHHHHHHhhhhhcccCCcchhHHHHHHHhhHHHHHHhcccchhHhHHhhhhccccccccCC
Q psy5048 156 HWDRRFTQKGPMAKNREHIAHRARRDRGKRRIQSFKPHRAESEKLYAHCSSAYALLVKKTPSIHNCFLLSTKSMLTFARN 235 (319)
Q Consensus 156 ~~a~~~ke~Gn~~~~~~~~~~~~~~~~~k~~~~~~k~~~~~~~~l~~~~~~~~~~~~~~~~a~~~c~~vl~~~~l~~~~~ 235 (319)
+.+...++.|+.++..+++..+... ..+.... .|... ..+...-.++..+..+..|+..|.++++.+|
T Consensus 11 ~~a~~~~~~G~~~~~~g~~~~A~~~-~~~al~~--~p~~~---~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p------ 78 (126)
T 4gco_A 11 ELAQEEKNKGNEYFKKGDYPTAMRH-YNEAVKR--DPENA---ILYSNRAACLTKLMEFQRALDDCDTCIRLDS------ 78 (126)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHH-HHHHHHH--CTTCH---HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT------
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHH-HHHHHHh--CCCCH---HHHHHHhhHHHhhccHHHHHHHHHHHHHhhh------
Confidence 4577888999999999988755431 1111111 11111 2333334466788999999999999999999
Q ss_pred CCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHH
Q psy5048 236 QSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIR 274 (319)
Q Consensus 236 ~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l 274 (319)
+|++|+|++|..+..+++++ |++++|+|.++...|..|
T Consensus 79 -~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~l~P~~~~a~~~l~~~ 124 (126)
T 4gco_A 79 -KFIKGYIRKAACLVAMREWSKAQRAYEDALQVDPSNEEAREGVRNC 124 (126)
T ss_dssp -TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred -hhhHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCcCCHHHHHHHHHh
Confidence 99999999999888888886 999999999999888765
No 48
>3gty_X Trigger factor, TF; chaperone-client complex, cell cycle, cell division, chapero isomerase, rotamase, ribonucleoprotein, binding; 3.40A {Thermotoga maritima} PDB: 3gu0_A
Probab=98.16 E-value=5.1e-06 Score=81.05 Aligned_cols=100 Identities=8% Similarity=0.030 Sum_probs=74.5
Q ss_pred CCCCCcEEEEEEEEEEeCCcEEeeeccCCCCeEEeeCCCcccccHhHhhhccccCcEEEEEeCCCCCCCCCCCCCCCCCC
Q psy5048 48 PYVNVKICVSSFKPTFKLTLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPGG 127 (319)
Q Consensus 48 p~~~~~v~v~~y~~~l~dg~v~d~s~~~~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~~v~i~p~~ayG~~g~~~~Ip~~ 127 (319)
...|+.|++ +|.++ .||..|+++.. .++.|.+|.+. + |+.+|.||++||...|.+.. +|
T Consensus 155 a~~gD~V~i-d~~~~-~dG~~~~~~~~--~~~~l~~g~~~--~-fe~~liG~k~Ge~~~~~vtF--------------aG 213 (433)
T 3gty_X 155 AEAGDLVRV-NMEVY-NEEGKKLTSRE--YEYVISEDEDR--P-FVKDLVGKKKGDVVEIEREY--------------EG 213 (433)
T ss_dssp CCTTSEEEE-EEEEE-CTTSCEEEEEE--EEEECCSSCCC--T-THHHHTTCCTTCEEEEEEEE--------------TT
T ss_pred cCCCCEEEE-EEEEE-ECCEECcCCCC--CCeEEEecCCc--h-HHHHhCCCCCCceEEEEEee--------------CC
Confidence 345677766 59998 59999997643 57889999887 3 99999999999999999854 35
Q ss_pred CeEEEEEEEeeeeeccchhhccCccccchhhhhhh-hcCCcccccchH
Q psy5048 128 LSAVRQSEHSELEISTKFFLELIPNKFLHWDRRFT-QKGPMAKNREHI 174 (319)
Q Consensus 128 ~~l~feVeL~~v~~~~~~~~~m~~eek~~~a~~~k-e~Gn~~~~~~~~ 174 (319)
.+..|+|+|.+|... -.|+-+.+++..+. +.++.-..+.+.
T Consensus 214 k~a~F~VtV~~Ik~~------~lPEldDEfak~~~~~~~tleelk~~i 255 (433)
T 3gty_X 214 KKYTYKLEVEEVYKR------TLPEIGDELAKSVNNEFETLEQLKESL 255 (433)
T ss_dssp EEEEEEEEEEEEEEE------CCCCSSHHHHHTTCSSCCSHHHHHHHH
T ss_pred CeEEEEEEEEEEEEe------cCCcccHHHHHHhCCCCCCHHHHHHHH
Confidence 799999999999853 35666677887764 234444344433
No 49
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=97.43 E-value=0.00011 Score=56.98 Aligned_cols=108 Identities=13% Similarity=0.092 Sum_probs=76.5
Q ss_pred hhhhhhcCCcccccchHHHHHHHHhhhhhcccCCcchhHHHHHHHhhHHHHHHhcccchhHhHHhhhhccccccccCCCC
Q psy5048 158 DRRFTQKGPMAKNREHIAHRARRDRGKRRIQSFKPHRAESEKLYAHCSSAYALLVKKTPSIHNCFLLSTKSMLTFARNQS 237 (319)
Q Consensus 158 a~~~ke~Gn~~~~~~~~~~~~~~~~~k~~~~~~k~~~~~~~~l~~~~~~~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~ 237 (319)
+......|+.++..+++..+...- .+.... .|... ......-.++..+..+..|+..+..++..+| +
T Consensus 4 a~~~~~~g~~~~~~~~~~~A~~~~-~~al~~--~p~~~---~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p-------~ 70 (126)
T 3upv_A 4 AEEARLEGKEYFTKSDWPNAVKAY-TEMIKR--APEDA---RGYSNRAAALAKLMSFPEAIADCNKAIEKDP-------N 70 (126)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHH-HHHHHH--CTTCH---HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-------T
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHH-HHHHHh--CCCCh---HHHHHHHHHHHHhcCHHHHHHHHHHHHHhCC-------C
Confidence 345566777777777775443211 111111 11111 2333333466778999999999999999999 9
Q ss_pred ChhHHHHHHHHHHhcCccc--------cccCC------CChhhHHHHHHHHHHHH
Q psy5048 238 TIPAWTHDYTRLALLLPFL--------QYEFP------PEQSQCLPLLGIRAQHQ 278 (319)
Q Consensus 238 NvKALfRrg~~~~~~~~~~--------a~~~d------P~n~~i~~el~~l~~~~ 278 (319)
|..++|++|..+..+++++ +++++ |.|..+...|..+.+++
T Consensus 71 ~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~p~~~~~~~~l~~~~~~l 125 (126)
T 3upv_A 71 FVRAYIRKATAQIAVKEYASALETLDAARTKDAEVNNGSSAREIDQLYYKASQQR 125 (126)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHC
T ss_pred cHHHHHHHHHHHHHHhCHHHHHHHHHHHHHhCcccCCchhHHHHHHHHHHHHHhh
Confidence 9999999999887788876 88899 99999999999988764
No 50
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=97.33 E-value=0.00017 Score=58.84 Aligned_cols=119 Identities=9% Similarity=-0.011 Sum_probs=83.2
Q ss_pred cchhhhhhhhcCCcccccchHHHHHHHHhhhhhcccCCcchhHHHHHHHhhHHHHHHhcccchhHhHHhhhhcccccccc
Q psy5048 154 FLHWDRRFTQKGPMAKNREHIAHRARRDRGKRRIQSFKPHRAESEKLYAHCSSAYALLVKKTPSIHNCFLLSTKSMLTFA 233 (319)
Q Consensus 154 k~~~a~~~ke~Gn~~~~~~~~~~~~~~~~~k~~~~~~k~~~~~~~~l~~~~~~~~~~~~~~~~a~~~c~~vl~~~~l~~~ 233 (319)
+...+......|+.++..+++..+...- .+..... |.. ......+-.++..+.++..|+..+..++..+|
T Consensus 7 ~~~~a~~~~~~g~~~~~~g~~~~A~~~~-~~al~~~--p~~---~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p---- 76 (164)
T 3sz7_A 7 PTPESDKLKSEGNAAMARKEYSKAIDLY-TQALSIA--PAN---PIYLSNRAAAYSASGQHEKAAEDAELATVVDP---- 76 (164)
T ss_dssp CCHHHHHHHHHHHHHHHTTCHHHHHHHH-HHHHHHS--TTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT----
T ss_pred hhhhHHHHHHHHHHHHHcCCHHHHHHHH-HHHHHhC--CcC---HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC----
Confidence 3345666777788877777775443211 1111111 111 12233333456778999999999999999999
Q ss_pred CCCCChhHHHHHHHHHHhcCccc--------cccCCCChhh--HHHHHHHHHHHHhHhHHHH
Q psy5048 234 RNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQ--CLPLLGIRAQHQRGHMITQ 285 (319)
Q Consensus 234 ~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~--i~~el~~l~~~~k~~~~ke 285 (319)
+|..++|++|..+..+++++ +++++|++.+ +...+..+++++.+...++
T Consensus 77 ---~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~~~~~~~~ 135 (164)
T 3sz7_A 77 ---KYSKAWSRLGLARFDMADYKGAKEAYEKGIEAEGNGGSDAMKRGLETTKRKIEEANRGA 135 (164)
T ss_dssp ---TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHSSSCCHHHHHHHHHHHHHHHHHHHCS
T ss_pred ---CCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999887778876 8999999988 7888888888887766543
No 51
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=96.82 E-value=0.00067 Score=53.55 Aligned_cols=105 Identities=10% Similarity=-0.026 Sum_probs=69.6
Q ss_pred hhhhhhhhcCCcccccchHHHHHHHHhhhhhcccCCcchhHHHHHHHhhHHHHHHhcccchhHhHHhhhhccccccccCC
Q psy5048 156 HWDRRFTQKGPMAKNREHIAHRARRDRGKRRIQSFKPHRAESEKLYAHCSSAYALLVKKTPSIHNCFLLSTKSMLTFARN 235 (319)
Q Consensus 156 ~~a~~~ke~Gn~~~~~~~~~~~~~~~~~k~~~~~~k~~~~~~~~l~~~~~~~~~~~~~~~~a~~~c~~vl~~~~l~~~~~ 235 (319)
+.+...++-||.++..+++..+... ..+.... .|.. ...+.+.-.++..+.++..|+..|.++++.+|
T Consensus 6 d~A~a~~~lG~~~~~~~~~~~A~~~-y~~Al~~--~p~~---~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~------ 73 (127)
T 4gcn_A 6 DAAIAEKDLGNAAYKQKDFEKAHVH-YDKAIEL--DPSN---ITFYNNKAAVYFEEKKFAECVQFCEKAVEVGR------ 73 (127)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHH-HHHHHHH--CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH------
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHH-HHHHHHh--CCCC---HHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCc------
Confidence 4566677889999988888654431 1111111 1121 12333344466888999999999999999887
Q ss_pred CCC-------hhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHH
Q psy5048 236 QST-------IPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIR 274 (319)
Q Consensus 236 ~~N-------vKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l 274 (319)
++ .++++|+|..+..++++. +++++|+ +++...|+.|
T Consensus 74 -~~~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~kal~~~~~-~~~~~~l~~l 125 (127)
T 4gcn_A 74 -ETRADYKLIAKAMSRAGNAFQKQNDLSLAVQWFHRSLSEFRD-PELVKKVKEL 125 (127)
T ss_dssp -HTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCC-HHHHHHHHHH
T ss_pred -ccchhhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcC-HHHHHHHHHh
Confidence 55 468999999777777776 7777775 4555555544
No 52
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=96.44 E-value=0.002 Score=49.91 Aligned_cols=72 Identities=10% Similarity=0.068 Sum_probs=61.8
Q ss_pred HHHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCC-----hhhHHHHHH
Q psy5048 206 SAYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPE-----QSQCLPLLG 272 (319)
Q Consensus 206 ~~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~-----n~~i~~el~ 272 (319)
.++..+..+..|+..+..++..+| +|..++|.+|..+..++++. +++++|+ +..+...|.
T Consensus 51 ~~~~~~~~~~~A~~~~~~al~~~p-------~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~l~ 123 (137)
T 3q49_B 51 LCYLKMQQPEQALADCRRALELDG-------QSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLNFGDDIPSALR 123 (137)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCCTTHHHHHHH
T ss_pred HHHHHhcCHHHHHHHHHHHHHhCc-------hhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHChhHHHHHHHHHHHHHH
Confidence 355677899999999999999998 99999999999777777775 8888998 899999999
Q ss_pred HHHHHHhHhHHH
Q psy5048 273 IRAQHQRGHMIT 284 (319)
Q Consensus 273 ~l~~~~k~~~~k 284 (319)
.++++..+..++
T Consensus 124 ~~~~~~~~~~e~ 135 (137)
T 3q49_B 124 IAKKKRWNSIEE 135 (137)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHh
Confidence 999887766554
No 53
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.25 E-value=0.011 Score=45.85 Aligned_cols=109 Identities=8% Similarity=-0.048 Sum_probs=72.5
Q ss_pred hhhhhhcCCcccccchHHHHHHHHhhhhhcccCCcchhHHHHHHHhhHHHHHHhcccchhHhHHhhhhccccccccCCCC
Q psy5048 158 DRRFTQKGPMAKNREHIAHRARRDRGKRRIQSFKPHRAESEKLYAHCSSAYALLVKKTPSIHNCFLLSTKSMLTFARNQS 237 (319)
Q Consensus 158 a~~~ke~Gn~~~~~~~~~~~~~~~~~k~~~~~~k~~~~~~~~l~~~~~~~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~ 237 (319)
+......|..++..+++..+... ..+.. ...|...........+-.++.....+..++..|..++..+| +
T Consensus 28 ~~~~~~~a~~~~~~~~~~~A~~~-~~~a~--~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~-------~ 97 (148)
T 2dba_A 28 VEQLRKEGNELFKCGDYGGALAA-YTQAL--GLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDG-------G 97 (148)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHH-HHHHH--TSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTS-------C
T ss_pred HHHHHHHHHHHHHhCCHHHHHHH-HHHHH--HHcccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCc-------c
Confidence 44455566666666666443321 11111 11122212223333333455677899999999999999988 9
Q ss_pred ChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHH
Q psy5048 238 TIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQ 276 (319)
Q Consensus 238 NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~ 276 (319)
|..++|++|..+..+++++ +++++|.+.++...+..+.+
T Consensus 98 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~ 144 (148)
T 2dba_A 98 DVKALYRRSQALEKLGRLDQAVLDLQRCVSLEPKNKVFQEALRNISG 144 (148)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHh
Confidence 9999999999777677775 88999999999988887754
No 54
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=96.12 E-value=0.01 Score=47.89 Aligned_cols=68 Identities=9% Similarity=-0.161 Sum_probs=54.7
Q ss_pred HHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHH
Q psy5048 207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQ 278 (319)
Q Consensus 207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~ 278 (319)
++..+..+..|+..+.++++.+| +|..|++.+|..+..+++++ +++++|++.++...|..+-.+.
T Consensus 40 ~y~~~~~~~~A~~~~~~al~~~p-------~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~ 112 (150)
T 4ga2_A 40 LYYEAKEYDLAKKYICTYINVQE-------RDPKAHRFLGLLYELEENTDKAVECYRRSVELNPTQKDLVLKIAELLCKN 112 (150)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHhCC-------CCHHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Confidence 45677888889999999999888 99999999999777777775 8889999988888877765554
Q ss_pred hHh
Q psy5048 279 RGH 281 (319)
Q Consensus 279 k~~ 281 (319)
...
T Consensus 113 ~~~ 115 (150)
T 4ga2_A 113 DVT 115 (150)
T ss_dssp CSS
T ss_pred CCh
Confidence 443
No 55
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=95.82 E-value=0.02 Score=50.88 Aligned_cols=72 Identities=10% Similarity=-0.012 Sum_probs=61.9
Q ss_pred hHHHHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHH
Q psy5048 204 CSSAYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRA 275 (319)
Q Consensus 204 ~~~~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~ 275 (319)
+-.++.....+..|+..+..+++.+| +|..+++++|..+...++++ +++++|++..+...|.++.
T Consensus 278 la~~~~~~~~~~~A~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~ 350 (359)
T 3ieg_A 278 ICHCFSKDEKPVEAIRICSEVLQMEP-------DNVNALKDRAEAYLIEEMYDEAIQDYEAAQEHNENDQQIREGLEKAQ 350 (359)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHH
T ss_pred HHHHHHHccCHHHHHHHHHHHHHhCc-------ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChHHHHHHHHHH
Confidence 33456777899999999999999988 99999999999777777775 9999999999999999998
Q ss_pred HHHhHhH
Q psy5048 276 QHQRGHM 282 (319)
Q Consensus 276 ~~~k~~~ 282 (319)
..++...
T Consensus 351 ~~~~~~~ 357 (359)
T 3ieg_A 351 RLLKQSQ 357 (359)
T ss_dssp HHHHHHH
T ss_pred HHHHHhc
Confidence 8877553
No 56
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=95.27 E-value=0.017 Score=51.79 Aligned_cols=105 Identities=13% Similarity=0.111 Sum_probs=67.5
Q ss_pred hhhhhcCCcccccchHHHHHHHHhhhhhcccCCcchhHHHHHHHhhHHHHHHhcccchhHhHHhhhhccccccccCCCCC
Q psy5048 159 RRFTQKGPMAKNREHIAHRARRDRGKRRIQSFKPHRAESEKLYAHCSSAYALLVKKTPSIHNCFLLSTKSMLTFARNQST 238 (319)
Q Consensus 159 ~~~ke~Gn~~~~~~~~~~~~~~~~~k~~~~~~k~~~~~~~~l~~~~~~~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~N 238 (319)
......|+.++..+++..+...- .+... ..|... .++...-.++..+..+..|+..+..++..+| +|
T Consensus 5 ~~~~~~g~~~~~~g~~~~A~~~~-~~al~--~~p~~~---~~~~~la~~~~~~~~~~~A~~~~~~al~~~p-------~~ 71 (281)
T 2c2l_A 5 QELKEQGNRLFVGRKYPEAAACY-GRAIT--RNPLVA---VYYTNRALCYLKMQQPEQALADCRRALELDG-------QS 71 (281)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHH-HHHHH--HCSCCH---HHHHHHHHHHHHTTCHHHHHHHHHHHTTSCT-------TC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHH-HHHHH--hCCccH---HHHHHHHHHHHHhcCHHHHHHHHHHHHHhCC-------CC
Confidence 34555667766666665433211 11111 111111 2333333456777999999999999999998 99
Q ss_pred hhHHHHHHHHHHhcCccc--------cccCCCCh-----hhHHHHHHHHHH
Q psy5048 239 IPAWTHDYTRLALLLPFL--------QYEFPPEQ-----SQCLPLLGIRAQ 276 (319)
Q Consensus 239 vKALfRrg~~~~~~~~~~--------a~~~dP~n-----~~i~~el~~l~~ 276 (319)
++|+|++|..+..++.++ +++++|++ ..+...++..+.
T Consensus 72 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~~~~~~~~~~~ 122 (281)
T 2c2l_A 72 VKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLNFGDDIPSALRIAKK 122 (281)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCCCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchhhHHHHHHHHHHHHHH
Confidence 999999999887778776 88888876 455555544433
No 57
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=95.13 E-value=0.071 Score=45.03 Aligned_cols=65 Identities=9% Similarity=-0.130 Sum_probs=55.6
Q ss_pred hHHHHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHH
Q psy5048 204 CSSAYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRA 275 (319)
Q Consensus 204 ~~~~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~ 275 (319)
+-.++.....+..|+..+..+++.+| +|+.|++.+|..+...++++ +++++|+|.++...|..+-
T Consensus 60 lg~~~~~~g~~~~A~~~~~~al~~~p-------~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~ 132 (208)
T 3urz_A 60 LALAYKKNRNYDKAYLFYKELLQKAP-------NNVDCLEACAEMQVCRGQEKDALRMYEKILQLEADNLAANIFLGNYY 132 (208)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHCC-------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHH
Confidence 33456777999999999999999999 99999999999777777775 8999999999888877654
No 58
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=95.08 E-value=0.048 Score=42.60 Aligned_cols=80 Identities=8% Similarity=-0.052 Sum_probs=62.5
Q ss_pred HHHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHH
Q psy5048 206 SAYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQH 277 (319)
Q Consensus 206 ~~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~ 277 (319)
+++...+.+..|+...+++++.+| +|..+++.+|..+..+++++ |+++||.+..+...+..+-..
T Consensus 21 ~~~~~~g~~~~A~~~~~~al~~~p-------~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~ 93 (126)
T 4gco_A 21 NEYFKKGDYPTAMRHYNEAVKRDP-------ENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIKGYIRKAACLVA 93 (126)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCC-------CCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHH
Confidence 355677899999999999999999 99999999999887778876 999999999888877777665
Q ss_pred HhHhHHHHHHHHHhcc
Q psy5048 278 QRGHMITQGSLYFFLF 293 (319)
Q Consensus 278 ~k~~~~kek~~y~~mF 293 (319)
.....+ -.+.|....
T Consensus 94 ~~~~~~-A~~~~~~al 108 (126)
T 4gco_A 94 MREWSK-AQRAYEDAL 108 (126)
T ss_dssp TTCHHH-HHHHHHHHH
T ss_pred CCCHHH-HHHHHHHHH
Confidence 554432 333444433
No 59
>1jvw_A Macrophage infectivity potentiator; chagas disease, X-RAY rotamase, isomeras; 1.70A {Trypanosoma cruzi} SCOP: d.26.1.1
Probab=95.01 E-value=0.012 Score=49.70 Aligned_cols=28 Identities=25% Similarity=0.322 Sum_probs=24.8
Q ss_pred cccCCCCCCCCCCCCCCCCCCeeecccceEEE
Q psy5048 7 LPFGENRNPFYKTPCIRPRSTLSLSPYSLSLI 38 (319)
Q Consensus 7 ~~~g~~g~~~~~~p~Ipp~atl~~d~~lv~~~ 38 (319)
++||+.|.| |.||||++|.|+++++++.
T Consensus 115 laYG~~g~~----~~Ipp~s~LiF~VeL~~i~ 142 (167)
T 1jvw_A 115 LAYGVTGGG----GMIPPYSPLEFDVELISIK 142 (167)
T ss_dssp GTTTTTCSS----SSSCTTCCEEEEEEEEEEG
T ss_pred hhCCCCCCC----CCcCCCCeEEEEEEEEEEE
Confidence 579998877 7999999999999999864
No 60
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=95.00 E-value=0.047 Score=53.03 Aligned_cols=109 Identities=8% Similarity=-0.043 Sum_probs=76.4
Q ss_pred hhhhhhhcCCcccccchHHHHHHHHhhhhhcccCCcchhHHHHHHHhhHHHHHHhcccchhHhHHhhhhccccccccCCC
Q psy5048 157 WDRRFTQKGPMAKNREHIAHRARRDRGKRRIQSFKPHRAESEKLYAHCSSAYALLVKKTPSIHNCFLLSTKSMLTFARNQ 236 (319)
Q Consensus 157 ~a~~~ke~Gn~~~~~~~~~~~~~~~~~k~~~~~~k~~~~~~~~l~~~~~~~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~ 236 (319)
.+......|+.++..+++..+... ..+.... .|.. ......+-.++..+.++..|+..+.++++.+|
T Consensus 5 ~a~~~~~lg~~~~~~g~~~~A~~~-~~~Al~~--~p~~---~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p------- 71 (477)
T 1wao_1 5 RAEELKTQANDYFKAKDYENAIKF-YSQAIEL--NPSN---AIYYGNRSLAYLRTECYGYALGDATRAIELDK------- 71 (477)
T ss_dssp HHTTSSSSSSSTTTTTCHHHHHHH-HHHHHHH--CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCT-------
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHH-HHHHHHh--CCcc---HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCC-------
Confidence 345566778888888877654421 1111111 1111 12233333456778999999999999999998
Q ss_pred CChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHH
Q psy5048 237 STIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQ 278 (319)
Q Consensus 237 ~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~ 278 (319)
+|..++|++|..+..+++++ |++++|++.++...|..+....
T Consensus 72 ~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~l~~~~~~~ 121 (477)
T 1wao_1 72 KYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIV 121 (477)
T ss_dssp TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCTTHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Confidence 99999999999777777775 8999999999988888775443
No 61
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=94.89 E-value=0.038 Score=43.57 Aligned_cols=69 Identities=7% Similarity=-0.146 Sum_probs=54.8
Q ss_pred HHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHH
Q psy5048 207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQ 278 (319)
Q Consensus 207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~ 278 (319)
++..+..+..|+..+..++..+| +|..++|.+|..+..+++++ +++++|.+.+......++...+
T Consensus 61 ~~~~~g~~~~A~~~~~~al~~~p-------~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~l 133 (142)
T 2xcb_A 61 CRQSLGLYEQALQSYSYGALMDI-------NEPRFPFHAAECHLQLGDLDGAESGFYSARALAAAQPAHEALAARAGAML 133 (142)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCT-------TCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCGGGHHHHHHHHHHH
T ss_pred HHHHHhhHHHHHHHHHHHHhcCC-------CCcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHH
Confidence 55677899999999999999998 99999999999877778875 8888898877665555555554
Q ss_pred hHhH
Q psy5048 279 RGHM 282 (319)
Q Consensus 279 k~~~ 282 (319)
+...
T Consensus 134 ~~l~ 137 (142)
T 2xcb_A 134 EAVT 137 (142)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4443
No 62
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=94.89 E-value=0.056 Score=39.54 Aligned_cols=63 Identities=13% Similarity=-0.019 Sum_probs=53.4
Q ss_pred HHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHH
Q psy5048 207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQ 276 (319)
Q Consensus 207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~ 276 (319)
++.....+..++..+..++..+| ++..+++..|..+..++++. +++++|++..+...+..+.+
T Consensus 47 ~~~~~~~~~~A~~~~~~~~~~~~-------~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~ 117 (118)
T 1elw_A 47 AYAKKGDYQKAYEDGCKTVDLKP-------DWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANNPQLKEGLQNMEA 117 (118)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHH
T ss_pred HHHhhccHHHHHHHHHHHHHhCc-------ccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCCCCHHHHHHHHHhhc
Confidence 45667889999999999999888 99999999999777777775 88999999998888877754
No 63
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=94.82 E-value=0.035 Score=44.62 Aligned_cols=63 Identities=8% Similarity=-0.156 Sum_probs=52.0
Q ss_pred HHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc---------cccCCCChhhHHHHHHHHHH
Q psy5048 207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL---------QYEFPPEQSQCLPLLGIRAQ 276 (319)
Q Consensus 207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~---------a~~~dP~n~~i~~el~~l~~ 276 (319)
++....++..|+.....+++.+| +|..+++..|..+..++.+. |++++|.|..+.....+|-.
T Consensus 74 ~~~~~~~~~~A~~~~~~al~~~p-------~~~~~~~~la~~~~~~~~~~~aa~~~~~~al~l~P~~~~~~~l~~~ll~ 145 (150)
T 4ga2_A 74 LYELEENTDKAVECYRRSVELNP-------TQKDLVLKIAELLCKNDVTDGRAKYWVERAAKLFPGSPAVYKLKEQLLD 145 (150)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHHCSSSSHHHHHHHHHHHHSTTCHHHHHHHHHHHH
T ss_pred HHHHcCchHHHHHHHHHHHHhCC-------CCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhCcCCHHHHHHHHHHHH
Confidence 55777899999999999999999 99999999999666555542 88999999998776665543
No 64
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=94.82 E-value=0.043 Score=45.91 Aligned_cols=66 Identities=12% Similarity=-0.053 Sum_probs=50.9
Q ss_pred cchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcC-----------ccc--------cccCCCChhhHHHHHHHH
Q psy5048 214 KTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLL-----------PFL--------QYEFPPEQSQCLPLLGIR 274 (319)
Q Consensus 214 ~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~-----------~~~--------a~~~dP~n~~i~~el~~l 274 (319)
...|+..+.++|+.+| ++..|+|..|.++..++ .|+ |++++|+|.....-|...
T Consensus 62 ~~eAi~~le~AL~ldP-------~~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~~~y~~al~~~ 134 (158)
T 1zu2_A 62 IQEAITKFEEALLIDP-------KKDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNTHYLKSLEMT 134 (158)
T ss_dssp HHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCc-------CcHHHHHHHHHHHHHhcccCcchhhhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 5689999999999999 99999999999766442 443 999999998877777666
Q ss_pred HHHHhHhHHHHH
Q psy5048 275 AQHQRGHMITQG 286 (319)
Q Consensus 275 ~~~~k~~~~kek 286 (319)
.+.-.-+..-.+
T Consensus 135 ~ka~el~~~~~~ 146 (158)
T 1zu2_A 135 AKAPQLHAEAYK 146 (158)
T ss_dssp HTHHHHHHHHHH
T ss_pred HhCHhccCcccc
Confidence 655544444433
No 65
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=94.67 E-value=0.042 Score=44.19 Aligned_cols=64 Identities=9% Similarity=-0.073 Sum_probs=50.6
Q ss_pred HHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHH
Q psy5048 207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQH 277 (319)
Q Consensus 207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~ 277 (319)
++..+.++..|+..+..++..+| +|..++|.+|..+..+++++ +++++|++.+......++...
T Consensus 64 ~~~~~g~~~~A~~~~~~al~l~p-------~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~ 135 (148)
T 2vgx_A 64 CRQAMGQYDLAIHSYSYGAVMDI-------XEPRFPFHAAECLLQXGELAEAESGLFLAQELIANXPEFXELSTRVSSM 135 (148)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHST-------TCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHH
T ss_pred HHHHHhhHHHHHHHHHHHHhcCC-------CCchHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCCCcchHHHHHHHHH
Confidence 55777899999999999999998 99999999999777777775 888888876654444443333
No 66
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=94.62 E-value=0.085 Score=41.45 Aligned_cols=113 Identities=9% Similarity=-0.041 Sum_probs=73.4
Q ss_pred ccchhhhhhhhcCCcccccchHHHHHHHHhhhhhcccCCcchhHHHHHHHhhHHHHHHhcccchhHhHHhhhhccccccc
Q psy5048 153 KFLHWDRRFTQKGPMAKNREHIAHRARRDRGKRRIQSFKPHRAESEKLYAHCSSAYALLVKKTPSIHNCFLLSTKSMLTF 232 (319)
Q Consensus 153 ek~~~a~~~ke~Gn~~~~~~~~~~~~~~~~~k~~~~~~k~~~~~~~~l~~~~~~~~~~~~~~~~a~~~c~~vl~~~~l~~ 232 (319)
.....+......|..++..+++..+...- .+..... |.. ......+-.++.....+..|+..+..++..+|
T Consensus 8 ~~~~~~~~~~~~a~~~~~~~~~~~A~~~~-~~al~~~--~~~---~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~--- 78 (166)
T 1a17_A 8 GALKRAEELKTQANDYFKAKDYENAIKFY-SQAIELN--PSN---AIYYGNRSLAYLRTECYGYALGDATRAIELDK--- 78 (166)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHH-HHHHHHS--TTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT---
T ss_pred hHHHHHHHHHHHHHHHHHccCHHHHHHHH-HHHHHhC--CCC---hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCc---
Confidence 34455666667777776666665433211 1111111 111 11222222345667889999999999999988
Q ss_pred cCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHH
Q psy5048 233 ARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQ 278 (319)
Q Consensus 233 ~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~ 278 (319)
+|..++++.|..+..++++. +++++|.+..+...+..+....
T Consensus 79 ----~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~ 128 (166)
T 1a17_A 79 ----KYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIV 128 (166)
T ss_dssp ----TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHH
T ss_pred ----ccHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Confidence 99999999999777777775 8899999988886666664433
No 67
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=94.57 E-value=0.083 Score=40.82 Aligned_cols=77 Identities=9% Similarity=-0.084 Sum_probs=58.7
Q ss_pred HHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHHhH
Q psy5048 209 ALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQRG 280 (319)
Q Consensus 209 ~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~k~ 280 (319)
.....+..|+..+..++..+| +|..|+|..|..+...+.+. |++++|++.++...|..+-.....
T Consensus 28 ~~~g~~~~A~~~~~~al~~~P-------~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~~~g~ 100 (121)
T 1hxi_A 28 LKLANLAEAALAFEAVCQKEP-------EREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTNEHN 100 (121)
T ss_dssp HHTTCHHHHHHHHHHHHHHST-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHHHCC-------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC
Confidence 456788899999999999999 99999999999777777775 899999999988877776655444
Q ss_pred hHHHHHHHHHhcc
Q psy5048 281 HMITQGSLYFFLF 293 (319)
Q Consensus 281 ~~~kek~~y~~mF 293 (319)
..+ -...|....
T Consensus 101 ~~~-A~~~~~~al 112 (121)
T 1hxi_A 101 ANA-ALASLRAWL 112 (121)
T ss_dssp HHH-HHHHHHHHH
T ss_pred HHH-HHHHHHHHH
Confidence 332 233444433
No 68
>2d9f_A FK506-binding protein 8 variant; FKBP, rapamycin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.41 E-value=0.026 Score=45.66 Aligned_cols=31 Identities=19% Similarity=0.288 Sum_probs=25.6
Q ss_pred cccCCCC-CCCCCCCCCCCCCCeeecccceEEEEee
Q psy5048 7 LPFGENR-NPFYKTPCIRPRSTLSLSPYSLSLILPR 41 (319)
Q Consensus 7 ~~~g~~g-~~~~~~p~Ipp~atl~~d~~lv~~~i~~ 41 (319)
++||..| .+ +.||||++|.|+++++++....
T Consensus 94 ~aYG~~~~~~----~~Ip~~~~l~f~vel~~v~~~~ 125 (135)
T 2d9f_A 94 YCYGPQGSRS----PYIPPHAALCLEVTLKTAVDRP 125 (135)
T ss_dssp HHTCTTCCSS----SCCCTTCCEEEEEEEEEEESSC
T ss_pred HccCcCCcCC----CccCCCCeEEEEEEEEEeecCC
Confidence 4689888 66 7899999999999999876433
No 69
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=94.41 E-value=0.047 Score=39.73 Aligned_cols=53 Identities=8% Similarity=-0.102 Sum_probs=46.0
Q ss_pred HHhcccchhHhHHhhhhccccccccCCCCChh-HHHHHHHHHHhcCccc--------cccCCCChhhHH
Q psy5048 209 ALLVKKTPSIHNCFLLSTKSMLTFARNQSTIP-AWTHDYTRLALLLPFL--------QYEFPPEQSQCL 268 (319)
Q Consensus 209 ~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvK-ALfRrg~~~~~~~~~~--------a~~~dP~n~~i~ 268 (319)
.....+..|+..+..++..+| +|.. ++|.+|..+..+++++ +++++|++..+.
T Consensus 11 ~~~~~~~~A~~~~~~al~~~p-------~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 72 (99)
T 2kc7_A 11 INQGDIENALQALEEFLQTEP-------VGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQ 72 (99)
T ss_dssp HHHTCHHHHHHHHHHHHHHCS-------STHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHH
T ss_pred HHcCCHHHHHHHHHHHHHHCC-------CcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHH
Confidence 456788899999999999998 9999 9999999777677775 889999998876
No 70
>2pbc_A FK506-binding protein 2; endoplasmic reticulum, isomerase, polymorphism, rotamase, structural genomics, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=94.24 E-value=0.023 Score=43.38 Aligned_cols=27 Identities=33% Similarity=0.479 Sum_probs=23.5
Q ss_pred cccCCCCCCCCCCCCCCCCCCeeecccceEE
Q psy5048 7 LPFGENRNPFYKTPCIRPRSTLSLSPYSLSL 37 (319)
Q Consensus 7 ~~~g~~g~~~~~~p~Ipp~atl~~d~~lv~~ 37 (319)
++||+.|.+ +.||||++|.|+++++++
T Consensus 70 ~ayG~~~~~----~~Ip~~~~l~f~v~l~~v 96 (102)
T 2pbc_A 70 LGYGERGAP----PKIPGGATLVFEVELLKI 96 (102)
T ss_dssp GTTTTTCBT----TTBCTTCCEEEEEEEEEE
T ss_pred HCcCCCCCC----CCcCcCCeEEEEEEEEEe
Confidence 568988876 689999999999999876
No 71
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=93.96 E-value=0.14 Score=36.06 Aligned_cols=63 Identities=16% Similarity=0.054 Sum_probs=51.9
Q ss_pred HHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHH
Q psy5048 207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQ 276 (319)
Q Consensus 207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~ 276 (319)
++.....+..|+..+..++..+| ++..+++..|..+...++++ +++++|.+..+...|..+-.
T Consensus 18 ~~~~~~~~~~A~~~~~~a~~~~~-------~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~ 88 (91)
T 1na3_A 18 AYYKQGDYDEAIEYYQKALELDP-------NNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQ 88 (91)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHccCHHHHHHHHHHHHhcCC-------CCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 34566888999999999999888 99999999999777777775 88899999888777765543
No 72
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=93.86 E-value=0.13 Score=41.62 Aligned_cols=65 Identities=5% Similarity=-0.172 Sum_probs=39.6
Q ss_pred HHHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHH
Q psy5048 206 SAYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQH 277 (319)
Q Consensus 206 ~~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~ 277 (319)
.++..++.+..|+..+.++++.+| +|+.|++.+|..+...++++ ++..+|.+..+...+..+-..
T Consensus 13 ~~~~~~g~~~~A~~~~~~al~~~p-------~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (184)
T 3vtx_A 13 DKKRTKGDFDGAIRAYKKVLKADP-------NNVETLLKLGKTYMDIGLPNDAIESLKKFVVLDTTSAEAYYILGSANFM 85 (184)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCC-------CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCchhHHHHHHHHHHHHH
Confidence 344556667777777777777666 77777777777555555553 555666665555554444433
No 73
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=93.64 E-value=0.21 Score=36.44 Aligned_cols=52 Identities=10% Similarity=0.005 Sum_probs=43.6
Q ss_pred HHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChh
Q psy5048 207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQS 265 (319)
Q Consensus 207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~ 265 (319)
++....++..|+..+..++..+| +|..+++.+|..+..+++++ +++++|++.
T Consensus 13 ~~~~~~~~~~A~~~~~~al~~~p-------~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~ 72 (111)
T 2l6j_A 13 SLFKQGLYREAVHCYDQLITAQP-------QNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAE 72 (111)
T ss_dssp HHHTTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTT
T ss_pred HHHHcCCHHHHHHHHHHHHhcCC-------CCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcc
Confidence 34556888899999999999888 99999999999777777775 889999983
No 74
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=93.52 E-value=0.1 Score=38.85 Aligned_cols=69 Identities=6% Similarity=-0.123 Sum_probs=55.6
Q ss_pred HHHHHhcccchhHhHHhhhhccccccccCCCCC-------hhHHHHHHHHHHhcCccc--------cccCCCChhhHHHH
Q psy5048 206 SAYALLVKKTPSIHNCFLLSTKSMLTFARNQST-------IPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPL 270 (319)
Q Consensus 206 ~~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~N-------vKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~e 270 (319)
.++.....+..|+..+..++...| ++ ..++++.|..+...++++ +++++| +.++...
T Consensus 46 ~~~~~~~~~~~A~~~~~~~~~~~~-------~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~-~~~~~~~ 117 (131)
T 1elr_A 46 AVYFEKGDYNKCRELCEKAIEVGR-------ENREDYRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEHR-TPDVLKK 117 (131)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHHH-------HSTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC-CHHHHHH
T ss_pred HHHHHhccHHHHHHHHHHHHhhcc-------ccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC-CHHHHHH
Confidence 345667889999999999999887 66 999999999777777775 888889 6888888
Q ss_pred HHHHHHHHhHhH
Q psy5048 271 LGIRAQHQRGHM 282 (319)
Q Consensus 271 l~~l~~~~k~~~ 282 (319)
+..+.+.+++..
T Consensus 118 l~~~~~~~~~~~ 129 (131)
T 1elr_A 118 CQQAEKILKEQE 129 (131)
T ss_dssp HHHHHHHHHHC-
T ss_pred HHHHHHHHHHhh
Confidence 888877766543
No 75
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=93.41 E-value=0.22 Score=46.15 Aligned_cols=70 Identities=10% Similarity=-0.004 Sum_probs=59.2
Q ss_pred hHHHHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHH
Q psy5048 204 CSSAYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRA 275 (319)
Q Consensus 204 ~~~~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~ 275 (319)
+..++.....+..|+..|..+++.+| +|..+++.+|..+...++++ +++++|++..+...|..+.
T Consensus 301 l~~~~~~~g~~~~A~~~~~~a~~~~p-------~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 373 (450)
T 2y4t_A 301 ICHCFSKDEKPVEAIRVCSEVLQMEP-------DNVNALKDRAEAYLIEEMYDEAIQDYETAQEHNENDQQIREGLEKAQ 373 (450)
T ss_dssp HHHHHHTTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSSSCHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHhCc-------ccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCcchHHHHHHHHHHH
Confidence 33455667889999999999999888 99999999999887777776 8899999999999998877
Q ss_pred HHHhH
Q psy5048 276 QHQRG 280 (319)
Q Consensus 276 ~~~k~ 280 (319)
...+.
T Consensus 374 ~~~~~ 378 (450)
T 2y4t_A 374 RLLKQ 378 (450)
T ss_dssp HHHHH
T ss_pred HHhhc
Confidence 66544
No 76
>1r9h_A FKB-6, FK506 binding protein family; structural genomics, peptidylprolyl isomerase, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: d.26.1.1
Probab=93.38 E-value=0.043 Score=44.36 Aligned_cols=28 Identities=21% Similarity=0.316 Sum_probs=24.9
Q ss_pred cccCCCCCCCCCCCCCCCCCCeeecccceEEE
Q psy5048 7 LPFGENRNPFYKTPCIRPRSTLSLSPYSLSLI 38 (319)
Q Consensus 7 ~~~g~~g~~~~~~p~Ipp~atl~~d~~lv~~~ 38 (319)
++||+.|.| +.||||++|.|+++++++.
T Consensus 94 ~aYG~~g~~----~~Ip~~~~l~f~v~l~~i~ 121 (135)
T 1r9h_A 94 YGYGDAGSP----PKIPGGATLIFEVELFEWS 121 (135)
T ss_dssp GTTTTTCBT----TTBCTTCCEEEEEEEEEEE
T ss_pred HcCCCCCCC----CCcCcCCcEEEEEEEEEee
Confidence 579999987 7899999999999999874
No 77
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=93.32 E-value=0.27 Score=37.21 Aligned_cols=68 Identities=10% Similarity=0.059 Sum_probs=56.2
Q ss_pred HHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHH
Q psy5048 207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQ 278 (319)
Q Consensus 207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~ 278 (319)
++.....+..|+.....++..+| +|..+++.+|..+..+++++ +++++|.+..+...+..+-...
T Consensus 13 ~~~~~~~~~~A~~~~~~al~~~p-------~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~ 85 (126)
T 3upv_A 13 EYFTKSDWPNAVKAYTEMIKRAP-------EDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQIAV 85 (126)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHhcCHHHHHHHHHHHHHhCC-------CChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHH
Confidence 34566889999999999999999 99999999999777777776 8999999988877777766555
Q ss_pred hHh
Q psy5048 279 RGH 281 (319)
Q Consensus 279 k~~ 281 (319)
...
T Consensus 86 ~~~ 88 (126)
T 3upv_A 86 KEY 88 (126)
T ss_dssp TCH
T ss_pred hCH
Confidence 443
No 78
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=93.22 E-value=0.12 Score=42.05 Aligned_cols=63 Identities=5% Similarity=-0.155 Sum_probs=41.3
Q ss_pred HHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHH
Q psy5048 209 ALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQ 278 (319)
Q Consensus 209 ~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~ 278 (319)
....++..|+..+..++..+| +|..+++-+|..+..++.|+ |++++|++..+..-|..+-.+.
T Consensus 47 ~~~g~~~eA~~~~~~al~~~P-------~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~~~~~~~~lg~~~~~l 117 (151)
T 3gyz_A 47 YNKGRIEEAEVFFRFLCIYDF-------YNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVFHTGQCQLRL 117 (151)
T ss_dssp HHTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSSCCHHHHHHHHHHHHT
T ss_pred HHcCCHHHHHHHHHHHHHhCC-------CCHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCCCCcHHHHHHHHHHHHc
Confidence 445666777777777777776 77777777777665566664 6667777766666555554443
No 79
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=93.20 E-value=0.12 Score=39.17 Aligned_cols=63 Identities=6% Similarity=-0.191 Sum_probs=51.0
Q ss_pred hHHHHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHH
Q psy5048 204 CSSAYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGI 273 (319)
Q Consensus 204 ~~~~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~ 273 (319)
+-.++..+.++..|+..+..+++.+| +|..++|..|..+..++.++ +++.+|.+.++..-.+.
T Consensus 33 lg~~~~~~~~~~~A~~~~~~al~~~p-------~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~a 103 (117)
T 3k9i_A 33 LGSTFRTLGEYRKAEAVLANGVKQFP-------NHQALRVFYAMVLYNLGRYEQGVELLLKIIAETSDDETIQSYKQA 103 (117)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHHHHHTHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCC-------CchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHH
Confidence 33456777999999999999999999 99999999999777777775 78889998877654333
No 80
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=93.09 E-value=0.18 Score=38.07 Aligned_cols=65 Identities=5% Similarity=-0.290 Sum_probs=53.0
Q ss_pred HHHHHhcccchhHhHHhhhhccccccccCCCCC---hhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHH
Q psy5048 206 SAYALLVKKTPSIHNCFLLSTKSMLTFARNQST---IPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIR 274 (319)
Q Consensus 206 ~~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~N---vKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l 274 (319)
.++....++..|+..+..++..+| ++ ..++|..|..+..+++++ +++.+|++..+...+.+|
T Consensus 47 ~~~~~~~~~~~A~~~~~~~~~~~p-------~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~l 119 (129)
T 2xev_A 47 ESYYATRNFQLAEAQFRDLVSRYP-------THDKAAGGLLKLGLSQYGEGKNTEAQQTLQQVATQYPGSDAARVAQERL 119 (129)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCT-------TSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTSHHHHHHHHHH
T ss_pred HHHHHhccHHHHHHHHHHHHHHCC-------CCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCChHHHHHHHHH
Confidence 355677899999999999999888 88 889999999777777775 788899988777766666
Q ss_pred HHH
Q psy5048 275 AQH 277 (319)
Q Consensus 275 ~~~ 277 (319)
...
T Consensus 120 ~~l 122 (129)
T 2xev_A 120 QSI 122 (129)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
No 81
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=92.84 E-value=0.28 Score=39.16 Aligned_cols=68 Identities=9% Similarity=-0.086 Sum_probs=57.1
Q ss_pred HHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHH
Q psy5048 207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQ 278 (319)
Q Consensus 207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~ 278 (319)
++.....+..|+.....+++.+| +|..+++.+|..+..+++++ +++++|.+..+...|..+-...
T Consensus 20 ~~~~~g~~~~A~~~~~~al~~~p-------~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~ 92 (164)
T 3sz7_A 20 AAMARKEYSKAIDLYTQALSIAP-------ANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKAWSRLGLARFDM 92 (164)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHST-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHcCCHHHHHHHHHHHHHhCC-------cCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Confidence 44667889999999999999999 99999999999777777776 9999999988888777776655
Q ss_pred hHh
Q psy5048 279 RGH 281 (319)
Q Consensus 279 k~~ 281 (319)
.++
T Consensus 93 g~~ 95 (164)
T 3sz7_A 93 ADY 95 (164)
T ss_dssp TCH
T ss_pred cCH
Confidence 443
No 82
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=92.83 E-value=0.21 Score=36.99 Aligned_cols=66 Identities=18% Similarity=0.160 Sum_probs=54.1
Q ss_pred HHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHH
Q psy5048 207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQ 278 (319)
Q Consensus 207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~ 278 (319)
++.....+..++..+..++..+| ++..+++..|..+...++++ +++++|.+..+...+..+-.+.
T Consensus 55 ~~~~~~~~~~A~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~ 127 (131)
T 2vyi_A 55 AYSKLGNYAGAVQDCERAICIDP-------AYSKAYGRMGLALSSLNKHVEAVAYYKKALELDPDNETYKSNLKIAELKL 127 (131)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHH
T ss_pred HHHHhhchHHHHHHHHHHHhcCc-------cCHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCccchHHHHHHHHHHHHH
Confidence 44667888999999999999888 99999999999777777775 8889999988887777766554
Q ss_pred h
Q psy5048 279 R 279 (319)
Q Consensus 279 k 279 (319)
.
T Consensus 128 ~ 128 (131)
T 2vyi_A 128 R 128 (131)
T ss_dssp T
T ss_pred h
Confidence 3
No 83
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=92.18 E-value=0.19 Score=37.58 Aligned_cols=64 Identities=9% Similarity=0.092 Sum_probs=50.8
Q ss_pred HHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHH
Q psy5048 207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQH 277 (319)
Q Consensus 207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~ 277 (319)
++.....+..|+..+..++..+| ++..+++..|..+...++++ +++++|.+..+...|..+-.+
T Consensus 59 ~~~~~~~~~~A~~~~~~a~~~~~-------~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~ 130 (133)
T 2lni_A 59 CYTKLLEFQLALKDCEECIQLEP-------TFIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSSCKEAADGYQRCMMA 130 (133)
T ss_dssp HHTTTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGTHHHHHHHHHHHH
T ss_pred HHHHhccHHHHHHHHHHHHHhCC-------CchHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHH
Confidence 44556788889999999999888 89999999999777677775 788899988887777666543
No 84
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=92.03 E-value=0.25 Score=38.68 Aligned_cols=68 Identities=4% Similarity=-0.295 Sum_probs=56.1
Q ss_pred HHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHH
Q psy5048 207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQ 278 (319)
Q Consensus 207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~ 278 (319)
++....++..|+..+..++..+| +|..+++..|..+...++++ +++++|++..+...+..+-...
T Consensus 27 ~~~~~g~~~~A~~~~~~al~~~p-------~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~ 99 (142)
T 2xcb_A 27 NQYQAGKWDDAQKIFQALCMLDH-------YDARYFLGLGACRQSLGLYEQALQSYSYGALMDINEPRFPFHAAECHLQL 99 (142)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHT
T ss_pred HHHHHccHHHHHHHHHHHHHhCC-------ccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHc
Confidence 34566889999999999999999 99999999999777778876 8899999998887777665554
Q ss_pred hHh
Q psy5048 279 RGH 281 (319)
Q Consensus 279 k~~ 281 (319)
...
T Consensus 100 g~~ 102 (142)
T 2xcb_A 100 GDL 102 (142)
T ss_dssp TCH
T ss_pred CCH
Confidence 443
No 85
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=92.01 E-value=0.26 Score=40.07 Aligned_cols=53 Identities=8% Similarity=-0.052 Sum_probs=47.0
Q ss_pred HHHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChh
Q psy5048 206 SAYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQS 265 (319)
Q Consensus 206 ~~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~ 265 (319)
.++..+.++..|+..+.+++..+| +|..++|.+|..+..++.++ |++++|+..
T Consensus 78 ~~~~~~g~~~~Ai~~~~~al~l~P-------~~~~~~~~lg~~~~~lg~~~eA~~~~~~al~l~~~~~ 138 (151)
T 3gyz_A 78 AIYQIKEQFQQAADLYAVAFALGK-------NDYTPVFHTGQCQLRLKAPLKAKECFELVIQHSNDEK 138 (151)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHSS-------SCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHH
T ss_pred HHHHHHccHHHHHHHHHHHHhhCC-------CCcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCHH
Confidence 366788999999999999999999 99999999999888888886 888999864
No 86
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=91.92 E-value=0.31 Score=45.70 Aligned_cols=109 Identities=8% Similarity=-0.074 Sum_probs=72.6
Q ss_pred cchhhhhhhhcCCcccccchHHHHHHHHhhhhhcccCCcchhHHHHHHHhhHHHHHHhcccchhHhHHhhhhcccccccc
Q psy5048 154 FLHWDRRFTQKGPMAKNREHIAHRARRDRGKRRIQSFKPHRAESEKLYAHCSSAYALLVKKTPSIHNCFLLSTKSMLTFA 233 (319)
Q Consensus 154 k~~~a~~~ke~Gn~~~~~~~~~~~~~~~~~k~~~~~~k~~~~~~~~l~~~~~~~~~~~~~~~~a~~~c~~vl~~~~l~~~ 233 (319)
+...+......|+.++..+++..+...- .+..... |. ......+-.++..+..+..|+..|..+++.+|
T Consensus 2 ~~~~a~~~~~~g~~~~~~g~~~~A~~~~-~~al~~~--p~----~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p---- 70 (514)
T 2gw1_A 2 KDKYALALKDKGNQFFRNKKYDDAIKYY-NWALELK--ED----PVFYSNLSACYVSVGDLKKVVEMSTKALELKP---- 70 (514)
T ss_dssp HHHHHHHHHHHHHHHHHTSCHHHHHHHH-HHHHHHC--CC----HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCS----
T ss_pred cchhHHHHHHHHHHHHHhccHHHHHHHH-HHHHhcC--cc----HHHHHhHHHHHHHHhhHHHHHHHHHHHhccCh----
Confidence 3456677788888888888776544311 1111111 21 12233333466778999999999999999999
Q ss_pred CCCCChhHHHHHHHHHHhcCccc--------cccCCCC-hhhHHHHHHHHHH
Q psy5048 234 RNQSTIPAWTHDYTRLALLLPFL--------QYEFPPE-QSQCLPLLGIRAQ 276 (319)
Q Consensus 234 ~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~-n~~i~~el~~l~~ 276 (319)
+|+.|++++|..+..++.++ +++++|. +..+...+..+..
T Consensus 71 ---~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (514)
T 2gw1_A 71 ---DYSKVLLRRASANEGLGKFADAMFDLSVLSLNGDFNDASIEPMLERNLN 119 (514)
T ss_dssp ---CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSSSCCGGGTHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCccchHHHHHHHHHH
Confidence 99999999999777777776 7788886 4444444444433
No 87
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=91.80 E-value=0.46 Score=44.73 Aligned_cols=64 Identities=6% Similarity=-0.038 Sum_probs=48.8
Q ss_pred HHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHH
Q psy5048 207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQH 277 (319)
Q Consensus 207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~ 277 (319)
++..+..+..++..+.++|+.+| +|.-|++.||..+..++.++ +++++|.|..+..-+..+-.+
T Consensus 175 ~~~~~g~~~eAl~~~~kal~ldP-------~~~~a~~~lg~~~~~~g~~~eAl~~~~~al~l~P~~~~a~~~lg~~l~~ 246 (382)
T 2h6f_A 175 LVEWLRDPSQELEFIADILNQDA-------KNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRNNSVWNQRYFVISN 246 (382)
T ss_dssp HHHHHTCCTTHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHccCHHHHHHHHHHHHHhCc-------cCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 44566778888888888888888 88888888888666666664 888888887777766666544
No 88
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=91.57 E-value=0.13 Score=41.71 Aligned_cols=60 Identities=8% Similarity=-0.041 Sum_probs=31.0
Q ss_pred HHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHH
Q psy5048 209 ALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRA 275 (319)
Q Consensus 209 ~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~ 275 (319)
.....+..++..+..++..+| +|..+++.+|..+..+++++ +++++|.+..+...|..+-
T Consensus 84 ~~~~~~~~a~~~~~~a~~~~~-------~~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~ 151 (184)
T 3vtx_A 84 FMIDEKQAAIDALQRAIALNT-------VYADAYYKLGLVYDSMGEHDKAIEAYEKTISIKPGFIRAYQSIGLAY 151 (184)
T ss_dssp HHTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHHhCc-------cchHHHHHHHHHHHHhCCchhHHHHHHHHHHhcchhhhHHHHHHHHH
Confidence 334445555555555555555 55555555555444444443 5555555555554444443
No 89
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=91.31 E-value=0.26 Score=46.46 Aligned_cols=80 Identities=9% Similarity=-0.062 Sum_probs=60.9
Q ss_pred HHHHhcc-cchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHH
Q psy5048 207 AYALLVK-KTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQH 277 (319)
Q Consensus 207 ~~~~~~~-~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~ 277 (319)
++..+.+ +..++..+..++..+| +|..|++.||..+..++.++ |+++||.|..+..-+..+-.+
T Consensus 140 ~l~~~g~d~~eAl~~~~~al~l~P-------~~~~a~~~~g~~~~~~g~~~eAl~~~~kal~ldP~~~~a~~~lg~~~~~ 212 (382)
T 2h6f_A 140 LLKSLQKDLHEEMNYITAIIEEQP-------KNYQVWHHRRVLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQE 212 (382)
T ss_dssp HHHHTTCCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHcccCHHHHHHHHHHHHHHCC-------CCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCccCHHHHHHHHHHHHH
Confidence 4455675 9999999999999999 99999999999777777775 999999998888877777666
Q ss_pred HhHhHHHHHHHHHhccc
Q psy5048 278 QRGHMITQGSLYFFLFY 294 (319)
Q Consensus 278 ~k~~~~kek~~y~~mF~ 294 (319)
..... +.-..|..+..
T Consensus 213 ~g~~~-eAl~~~~~al~ 228 (382)
T 2h6f_A 213 FKLWD-NELQYVDQLLK 228 (382)
T ss_dssp HTCCT-THHHHHHHHHH
T ss_pred cCChH-HHHHHHHHHHH
Confidence 55432 23334444433
No 90
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=90.95 E-value=0.13 Score=43.31 Aligned_cols=38 Identities=5% Similarity=-0.170 Sum_probs=32.1
Q ss_pred HHHHHhcccchhHhHHhhhhccccccccCCCC--ChhHHHHHHHHHH
Q psy5048 206 SAYALLVKKTPSIHNCFLLSTKSMLTFARNQS--TIPAWTHDYTRLA 250 (319)
Q Consensus 206 ~~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~--NvKALfRrg~~~~ 250 (319)
.++..+..+..|+..+.++++.+| + |..|++..|..+.
T Consensus 125 ~~~~~~~~~~~A~~~~~~al~~~p-------~~~~~~~~~~l~~~~~ 164 (228)
T 4i17_A 125 QKFQQAGNIEKAEENYKHATDVTS-------KKWKTDALYSLGVLFY 164 (228)
T ss_dssp HHHHHTTCHHHHHHHHHHHTTSSC-------HHHHHHHHHHHHHHHH
T ss_pred HHHHHhccHHHHHHHHHHHHhcCC-------CcccHHHHHHHHHHHH
Confidence 355667889999999999999998 9 9999999988443
No 91
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=90.84 E-value=0.24 Score=36.54 Aligned_cols=43 Identities=7% Similarity=-0.199 Sum_probs=37.7
Q ss_pred HHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc
Q psy5048 207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL 256 (319)
Q Consensus 207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~ 256 (319)
++....++..|+..+..+++.+| +|..|+|.+|..+..+++++
T Consensus 16 ~~~~~g~~~~A~~~~~~al~~~p-------~~~~a~~~lg~~~~~~g~~~ 58 (100)
T 3ma5_A 16 EHLKHDNASRALALFEELVETDP-------DYVGTYYHLGKLYERLDRTD 58 (100)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHST-------TCTHHHHHHHHHHHHTTCHH
T ss_pred HHHHcCCHHHHHHHHHHHHHhCC-------CcHHHHHHHHHHHHHcCCHH
Confidence 45667889999999999999999 99999999999887777775
No 92
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=90.71 E-value=0.33 Score=49.92 Aligned_cols=63 Identities=6% Similarity=-0.148 Sum_probs=36.8
Q ss_pred hcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHHhH
Q psy5048 211 LVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQRG 280 (319)
Q Consensus 211 ~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~k~ 280 (319)
+.++..|+..+.++++.+| +|..|++.+|..+..++.++ |++++|++.++...|..+-..+.+
T Consensus 90 ~g~~~~A~~~~~kAl~l~P-------~~~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~l~P~~~~a~~~L~~~l~~~g~ 160 (723)
T 4gyw_A 90 MQDVQGALQCYTRAIQINP-------AFADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCD 160 (723)
T ss_dssp TTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTC
T ss_pred cCCHHHHHHHHHHHHHhCC-------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHhhhhhHHHhccc
Confidence 3555556666666666555 66666666666555555554 666666666666666555554443
No 93
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=90.68 E-value=0.74 Score=36.59 Aligned_cols=68 Identities=1% Similarity=-0.313 Sum_probs=55.9
Q ss_pred HHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHH
Q psy5048 207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQ 278 (319)
Q Consensus 207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~ 278 (319)
++....++..|+.....++..+| +|..+++.+|..+...+.++ |++++|++..+...|..+-...
T Consensus 30 ~~~~~g~~~~A~~~~~~al~~~p-------~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~ 102 (148)
T 2vgx_A 30 NQYQSGXYEDAHXVFQALCVLDH-------YDSRFFLGLGACRQAMGQYDLAIHSYSYGAVMDIXEPRFPFHAAECLLQX 102 (148)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHT
T ss_pred HHHHcCChHHHHHHHHHHHHcCc-------ccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHc
Confidence 34566889999999999999999 99999999999777778876 8899999998887777665544
Q ss_pred hHh
Q psy5048 279 RGH 281 (319)
Q Consensus 279 k~~ 281 (319)
...
T Consensus 103 g~~ 105 (148)
T 2vgx_A 103 GEL 105 (148)
T ss_dssp TCH
T ss_pred CCH
Confidence 433
No 94
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=90.67 E-value=0.9 Score=38.29 Aligned_cols=65 Identities=8% Similarity=-0.217 Sum_probs=55.1
Q ss_pred HHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHH
Q psy5048 207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQ 278 (319)
Q Consensus 207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~ 278 (319)
++....++..|+..+..++..+| +|..|+|.+|..+...++++ +++++|++.++...|..+-...
T Consensus 14 ~~~~~g~~~~A~~~~~~al~~~p-------~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~ 86 (217)
T 2pl2_A 14 QLYALGRYDAALTLFERALKENP-------QDPEALYWLARTQLKLGLVNPALENGKTLVARTPRYLGGYMVLSEAYVAL 86 (217)
T ss_dssp HHHHTTCHHHHHHHHHHHHTTSS-------SCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHhCC-------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHh
Confidence 34566888999999999999999 99999999999777777775 8899999999888887776655
No 95
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=90.02 E-value=0.37 Score=37.28 Aligned_cols=54 Identities=11% Similarity=-0.124 Sum_probs=46.4
Q ss_pred HHHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhh
Q psy5048 206 SAYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQ 266 (319)
Q Consensus 206 ~~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~ 266 (319)
+++-....+..|+...+++++.+| +|+-+++.+|..+..+++|+ |++++|++..
T Consensus 16 ~~~~~~~~~~~A~~~y~~Al~~~p-------~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~ 77 (127)
T 4gcn_A 16 NAAYKQKDFEKAHVHYDKAIELDP-------SNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRA 77 (127)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCC-------CCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccch
Confidence 355677899999999999999999 99999999999888788886 8888888643
No 96
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=89.80 E-value=0.72 Score=34.24 Aligned_cols=79 Identities=6% Similarity=-0.014 Sum_probs=59.8
Q ss_pred HHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHH
Q psy5048 207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQ 278 (319)
Q Consensus 207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~ 278 (319)
++.....+..|+..+..++..+| +|..+++.+|..+...++++ +++++|.+..+...+..+-.+.
T Consensus 25 ~~~~~~~~~~A~~~~~~al~~~~-------~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~ 97 (133)
T 2lni_A 25 ECFQKGDYPQAMKHYTEAIKRNP-------KDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAALEAM 97 (133)
T ss_dssp HHHHTTCSHHHHHHHHHHHTTCT-------TCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHcCCHHHHHHHHHHHHHcCC-------CcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHH
Confidence 34567889999999999999888 99999999999877777775 8889999988888887776555
Q ss_pred hHhHHHHHHHHHhcc
Q psy5048 279 RGHMITQGSLYFFLF 293 (319)
Q Consensus 279 k~~~~kek~~y~~mF 293 (319)
.... +-.+.|....
T Consensus 98 ~~~~-~A~~~~~~~~ 111 (133)
T 2lni_A 98 KDYT-KAMDVYQKAL 111 (133)
T ss_dssp TCHH-HHHHHHHHHH
T ss_pred hhHH-HHHHHHHHHH
Confidence 4433 2233444433
No 97
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=89.77 E-value=0.93 Score=34.25 Aligned_cols=68 Identities=9% Similarity=-0.121 Sum_probs=56.3
Q ss_pred HHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHH
Q psy5048 207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQ 278 (319)
Q Consensus 207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~ 278 (319)
++.....+..|+.....++..+| +|..+++.+|..+...+++. +++++|.+..+...|..+-...
T Consensus 18 ~~~~~~~~~~A~~~~~~al~~~~-------~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~ 90 (137)
T 3q49_B 18 RLFVGRKYPEAAACYGRAITRNP-------LVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQLEM 90 (137)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHhCcHHHHHHHHHHHHhhCc-------CcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHH
Confidence 44567888999999999999998 99999999999777777775 8899999988888877776665
Q ss_pred hHh
Q psy5048 279 RGH 281 (319)
Q Consensus 279 k~~ 281 (319)
...
T Consensus 91 ~~~ 93 (137)
T 3q49_B 91 ESY 93 (137)
T ss_dssp TCH
T ss_pred hhH
Confidence 443
No 98
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=89.43 E-value=0.35 Score=36.38 Aligned_cols=65 Identities=5% Similarity=-0.111 Sum_probs=50.9
Q ss_pred hcccchhHhHHhhhhcc---ccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHHh
Q psy5048 211 LVKKTPSIHNCFLLSTK---SMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQR 279 (319)
Q Consensus 211 ~~~~~~a~~~c~~vl~~---~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~k 279 (319)
+..+..|+.....+++. +| ++..+++..|..+..+++++ +++++|++..+...|..+-....
T Consensus 3 ~g~~~~A~~~~~~al~~~~~~p-------~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g 75 (117)
T 3k9i_A 3 LGLEAQAVPYYEKAIASGLQGK-------DLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQALRVFYAMVLYNLG 75 (117)
T ss_dssp ----CCCHHHHHHHHSSCCCHH-------HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHT
T ss_pred CCcHHHHHHHHHHHHHcCCCCc-------cHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcC
Confidence 35677899999999998 67 99999999999777778886 89999999998888877765554
Q ss_pred HhH
Q psy5048 280 GHM 282 (319)
Q Consensus 280 ~~~ 282 (319)
...
T Consensus 76 ~~~ 78 (117)
T 3k9i_A 76 RYE 78 (117)
T ss_dssp CHH
T ss_pred CHH
Confidence 443
No 99
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=89.14 E-value=1 Score=36.08 Aligned_cols=59 Identities=5% Similarity=-0.115 Sum_probs=40.6
Q ss_pred Hhccc--chhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHH
Q psy5048 210 LLVKK--TPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRA 275 (319)
Q Consensus 210 ~~~~~--~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~ 275 (319)
....+ ..++..+..++..+| +|..+++..|..+...++++ +++++|.+.+....+..+.
T Consensus 91 ~~~~~~~~~A~~~~~~al~~~p-------~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~i~ 159 (177)
T 2e2e_A 91 QASQHMTAQTRAMIDKALALDS-------NEITALMLLASDAFMQANYAQAIELWQKVMDLNSPRINRTQLVESIN 159 (177)
T ss_dssp HTTTCCCHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTSCHHHHHHHHH
T ss_pred hcCCcchHHHHHHHHHHHHhCC-------CcHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCccHHHHHHHHH
Confidence 44555 777888888887777 78888888888666666664 7778887766554444443
No 100
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=89.11 E-value=0.35 Score=40.55 Aligned_cols=56 Identities=7% Similarity=-0.066 Sum_probs=48.6
Q ss_pred HHHHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhH
Q psy5048 205 SSAYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQC 267 (319)
Q Consensus 205 ~~~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i 267 (319)
-.++..+..+..|+..+..++..+| +|..+++.+|..+..+++++ +++++|.+..+
T Consensus 49 ~~~~~~~~~~~~A~~~~~~al~~~p-------~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~ 112 (228)
T 4i17_A 49 GVCADNIKKYKEAADYFDIAIKKNY-------NLANAYIGKSAAYRDMKNNQEYIATLTEGIKAVPGNATI 112 (228)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHTTC-------SHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHH
T ss_pred HHHHHHhhcHHHHHHHHHHHHHhCc-------chHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHH
Confidence 3456777999999999999999998 99999999999777778876 88999999854
No 101
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=88.96 E-value=0.38 Score=40.33 Aligned_cols=63 Identities=11% Similarity=0.077 Sum_probs=35.6
Q ss_pred HHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHH
Q psy5048 207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQ 276 (319)
Q Consensus 207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~ 276 (319)
++.....+..|+..+..+++.+| +|..+++.+|..+...++++ +++++|.+..+...+..+-.
T Consensus 148 ~~~~~~~~~~A~~~~~~a~~~~~-------~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~ 218 (258)
T 3uq3_A 148 EYFTKSDWPNAVKAYTEMIKRAP-------EDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQI 218 (258)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHhcCHHHHHHHHHHHHhcCc-------ccHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 33444566666666666666655 66666666666554455543 55566666555544444433
No 102
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=88.23 E-value=1.4 Score=31.67 Aligned_cols=80 Identities=4% Similarity=-0.119 Sum_probs=59.2
Q ss_pred HHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHH
Q psy5048 207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQ 278 (319)
Q Consensus 207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~ 278 (319)
++.....+..++..+..++..+| +|..+++..|..+...++++ +++++|.+..+...+..+-...
T Consensus 13 ~~~~~~~~~~A~~~~~~~~~~~~-------~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 85 (118)
T 1elw_A 13 KALSVGNIDDALQCYSEAIKLDP-------HNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALEFL 85 (118)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHcccHHHHHHHHHHHHHHCC-------CcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHH
Confidence 33556888899999999999888 99999999999776667775 8889999988887777766554
Q ss_pred hHhHHHHHHHHHhccc
Q psy5048 279 RGHMITQGSLYFFLFY 294 (319)
Q Consensus 279 k~~~~kek~~y~~mF~ 294 (319)
... .+-.+.|.....
T Consensus 86 ~~~-~~A~~~~~~~~~ 100 (118)
T 1elw_A 86 NRF-EEAKRTYEEGLK 100 (118)
T ss_dssp TCH-HHHHHHHHHHHT
T ss_pred hhH-HHHHHHHHHHHH
Confidence 432 333444554443
No 103
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=87.89 E-value=1 Score=32.14 Aligned_cols=63 Identities=10% Similarity=-0.140 Sum_probs=47.5
Q ss_pred HHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCC--hhhHHHHHHHHHHHH
Q psy5048 209 ALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPE--QSQCLPLLGIRAQHQ 278 (319)
Q Consensus 209 ~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~--n~~i~~el~~l~~~~ 278 (319)
.....+..|+.....++..+| .+..+++.+|..+..++.++ +++++|. +..+...+..+-.+.
T Consensus 17 ~~~~~~~~A~~~~~~a~~~~~-------~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~l~~~~~~~ 89 (112)
T 2kck_A 17 YDAGNYTESIDLFEKAIQLDP-------EESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVWAAKADALRYI 89 (112)
T ss_dssp HSSCCHHHHHHHHHHHHHHCC-------CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHHHHHHHHHHTTC
T ss_pred HHhhhHHHHHHHHHHHHHhCc-------CCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHH
Confidence 445677788888888888888 88999999998776667765 7888888 777766666554443
No 104
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=87.77 E-value=0.62 Score=33.72 Aligned_cols=44 Identities=11% Similarity=-0.127 Sum_probs=36.5
Q ss_pred HHHHHhcccchhHhHHhhhhccccccccCCCCC------hhHHHHHHHHHHhcCccc
Q psy5048 206 SAYALLVKKTPSIHNCFLLSTKSMLTFARNQST------IPAWTHDYTRLALLLPFL 256 (319)
Q Consensus 206 ~~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~N------vKALfRrg~~~~~~~~~~ 256 (319)
.++..+..+..|+..|..++..+| +| .+++|++|..+..++.+.
T Consensus 46 ~~~~~~g~~~~A~~~~~~al~~~p-------~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (111)
T 2l6j_A 46 MALIKLGEYTQAIQMCQQGLRYTS-------TAEHVAIRSKLQYRLELAQGAVGSVQ 95 (111)
T ss_dssp HHHHHTTCHHHHHHHHHHHHTSCS-------STTSHHHHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHhcCHHHHHHHHHHHHHhCC-------CccHHHHHHHHHHHHHHHHHHHHhHh
Confidence 355777999999999999999998 88 999999999666555443
No 105
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=87.77 E-value=0.35 Score=37.14 Aligned_cols=53 Identities=11% Similarity=-0.199 Sum_probs=38.9
Q ss_pred HHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhh
Q psy5048 207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQ 266 (319)
Q Consensus 207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~ 266 (319)
++....++..|+..+..+++.+| +|..|++..|..+...+.++ +++++|.+.+
T Consensus 60 ~~~~~g~~~~A~~~~~~al~l~P-------~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~P~~~~ 120 (121)
T 1hxi_A 60 TQAENEKDGLAIIALNHARMLDP-------KDIAVHAALAVSHTNEHNANAALASLRAWLLSQPQYEQ 120 (121)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-------
T ss_pred HHHHcCCHHHHHHHHHHHHHhCC-------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCCCC
Confidence 45667889999999999999999 99999999999666666654 7788887654
No 106
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=87.58 E-value=0.9 Score=46.63 Aligned_cols=80 Identities=9% Similarity=-0.075 Sum_probs=62.5
Q ss_pred HHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHH
Q psy5048 207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQ 278 (319)
Q Consensus 207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~ 278 (319)
++..+.++..|+....++++.+| ++..|++.+|..+..+++++ |++++|++.++...|..+-..+
T Consensus 52 ~l~~~g~~~eA~~~~~~Al~l~P-------~~~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~~~~~ 124 (723)
T 4gyw_A 52 VLQQQGKLQEALMHYKEAIRISP-------TFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDS 124 (723)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHcCCHHHHHHHHHHHHHhCC-------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Confidence 45666889999999999999998 99999999999888788776 8899999999988888776665
Q ss_pred hHhHHHHHHHHHhccc
Q psy5048 279 RGHMITQGSLYFFLFY 294 (319)
Q Consensus 279 k~~~~kek~~y~~mF~ 294 (319)
.... +-.+.|.+...
T Consensus 125 g~~~-eAi~~~~~Al~ 139 (723)
T 4gyw_A 125 GNIP-EAIASYRTALK 139 (723)
T ss_dssp TCHH-HHHHHHHHHHH
T ss_pred CCHH-HHHHHHHHHHH
Confidence 4433 33344554444
No 107
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=87.21 E-value=0.18 Score=47.80 Aligned_cols=107 Identities=10% Similarity=0.037 Sum_probs=67.1
Q ss_pred hhhccCccccchhhhhhhhcCCcccccchHHHHHH--HHhhhhhcccCCcchhHHHHHHHhhHHHHHHhcccchhHhHHh
Q psy5048 145 FFLELIPNKFLHWDRRFTQKGPMAKNREHIAHRAR--RDRGKRRIQSFKPHRAESEKLYAHCSSAYALLVKKTPSIHNCF 222 (319)
Q Consensus 145 ~~~~m~~eek~~~a~~~ke~Gn~~~~~~~~~~~~~--~~~~k~~~~~~k~~~~~~~~l~~~~~~~~~~~~~~~~a~~~c~ 222 (319)
....++++++...+......|+.++..+++..+.. ...... .|... .....+-.++..+..+..|+..|.
T Consensus 12 ~~~~~~~~~~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~-----~p~~~---~~~~~la~~~~~~g~~~~A~~~~~ 83 (537)
T 3fp2_A 12 QLKGLSPSQRQAYAVQLKNRGNHFFTAKNFNEAIKYYQYAIEL-----DPNEP---VFYSNISACYISTGDLEKVIEFTT 83 (537)
T ss_dssp HHTTSCHHHHHHHHHHHHHHHHHHHHTTCCC-CHHHHHHHHHH-----CTTCH---HHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred hhcCCCcchhHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhh-----CCCCc---HHHHHHHHHHHHcCCHHHHHHHHH
Confidence 34567777777778888888888777776643221 111111 11111 222233345677799999999999
Q ss_pred hhhccccccccCCCCChhHHHHHHHHHHhcCccc-------cccCCCChhh
Q psy5048 223 LLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL-------QYEFPPEQSQ 266 (319)
Q Consensus 223 ~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~-------a~~~dP~n~~ 266 (319)
.+++.+| +|+.+++++|..+..++.++ ++.++|....
T Consensus 84 ~al~~~p-------~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~ 127 (537)
T 3fp2_A 84 KALEIKP-------DHSKALLRRASANESLGNFTDAMFDLSVLSLNGDFDG 127 (537)
T ss_dssp HHHHHCT-------TCHHHHHHHHHHHHHHTCHHHHHHHHHHHC-------
T ss_pred HHHhcCC-------chHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCCCCCh
Confidence 9999999 99999999999777667765 5667777543
No 108
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=87.18 E-value=0.75 Score=34.17 Aligned_cols=52 Identities=10% Similarity=-0.104 Sum_probs=42.7
Q ss_pred HHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChh
Q psy5048 207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQS 265 (319)
Q Consensus 207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~ 265 (319)
++.....+..|+..+..++..+| ++..+++..|..+...++++ +++++|.+.
T Consensus 28 ~~~~~g~~~~A~~~~~~al~~~p-------~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~ 87 (115)
T 2kat_A 28 TYAEHEQFDAALPHLRAALDFDP-------TYSVAWKWLGKTLQGQGDRAGARQAWESGLAAAQSRG 87 (115)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHccCHHHHHHHHHHHHHHCC-------CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhccccc
Confidence 45667889999999999999998 99999999999777677775 777777643
No 109
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=86.83 E-value=0.83 Score=36.91 Aligned_cols=56 Identities=11% Similarity=-0.135 Sum_probs=43.1
Q ss_pred HHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHH
Q psy5048 209 ALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLG 272 (319)
Q Consensus 209 ~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~ 272 (319)
.....+..++..+..++..+| +|..|++..|..+...++++ +++++| +..+...+.
T Consensus 17 ~~~g~~~~A~~~~~~al~~~P-------~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p-~~~~~~~~~ 80 (176)
T 2r5s_A 17 LQQGEHAQALNVIQTLSDELQ-------SRGDVKLAKADCLLETKQFELAQELLATIPLEYQ-DNSYKSLIA 80 (176)
T ss_dssp HHTTCHHHHHHHHHTSCHHHH-------TSHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGC-CHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHHHCC-------CcHHHHHHHHHHHHHCCCHHHHHHHHHHhhhccC-ChHHHHHHH
Confidence 445778888999999999888 99999999999776667765 777888 666554443
No 110
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=86.79 E-value=1.8 Score=35.35 Aligned_cols=82 Identities=6% Similarity=-0.096 Sum_probs=58.8
Q ss_pred HHHHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChh-----------
Q psy5048 205 SSAYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQS----------- 265 (319)
Q Consensus 205 ~~~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~----------- 265 (319)
-.++.....+..|+..+..++..+| ++..+++.+|..+...++++ ++++.|.+.
T Consensus 44 g~~~~~~g~~~~A~~~~~~al~~~~-------~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~ 116 (213)
T 1hh8_A 44 GCMYTILKNMTEAEKAFTRSINRDK-------HLAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQF 116 (213)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCC
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCc-------cchHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCccHHHHHHhcccc
Confidence 3455777899999999999999988 99999999999777777775 888888766
Q ss_pred -----hHHHHHHHHHHHHhHhHHHHHHHHHhccc
Q psy5048 266 -----QCLPLLGIRAQHQRGHMITQGSLYFFLFY 294 (319)
Q Consensus 266 -----~i~~el~~l~~~~k~~~~kek~~y~~mF~ 294 (319)
.+...+..+-.+.... .+-...|.....
T Consensus 117 ~~~~~~~~~~l~~~~~~~g~~-~~A~~~~~~al~ 149 (213)
T 1hh8_A 117 KLFACEVLYNIAFMYAKKEEW-KKAEEQLALATS 149 (213)
T ss_dssp EEEHHHHHHHHHHHHHHTTCH-HHHHHHHHHHHT
T ss_pred CccchHHHHHHHHHHHHccCH-HHHHHHHHHHHH
Confidence 6666666555444332 222334444443
No 111
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=86.73 E-value=1.6 Score=31.60 Aligned_cols=63 Identities=16% Similarity=0.054 Sum_probs=47.0
Q ss_pred HHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHH
Q psy5048 207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQ 276 (319)
Q Consensus 207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~ 276 (319)
++.....+..++..+..++..+| .+..+++..|..+...++++ +++++|++..+...|..+..
T Consensus 52 ~~~~~~~~~~A~~~~~~~~~~~~-------~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~ 122 (125)
T 1na0_A 52 AYYKQGDYDEAIEYYQKALELDP-------NNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQ 122 (125)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHhCCHHHHHHHHHHHHHhCC-------ccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Confidence 44556778888888888888777 88888888888666666664 77788888877777666543
No 112
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=86.43 E-value=1.5 Score=32.38 Aligned_cols=57 Identities=16% Similarity=0.026 Sum_probs=45.7
Q ss_pred hhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHHh
Q psy5048 216 PSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQR 279 (319)
Q Consensus 216 ~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~k 279 (319)
.++..+..++..+| +|..++|..|..+...+++. +++++|.+..+...|..+-....
T Consensus 3 ~a~~~~~~al~~~p-------~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g 67 (115)
T 2kat_A 3 AITERLEAMLAQGT-------DNMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQG 67 (115)
T ss_dssp CHHHHHHHHHTTTC-------CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhCC-------CcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcC
Confidence 46777888888888 99999999999777777775 88999999888777766655443
No 113
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=86.32 E-value=0.43 Score=39.50 Aligned_cols=62 Identities=11% Similarity=-0.117 Sum_probs=50.2
Q ss_pred ccchhHhHHhhhhccc-cccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHHhH
Q psy5048 213 KKTPSIHNCFLLSTKS-MLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQRG 280 (319)
Q Consensus 213 ~~~~a~~~c~~vl~~~-~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~k~ 280 (319)
....+|..+..+++.+ |. +|..+||-.|..+..+.+|+ +++++|+|+.+....+.++++++.
T Consensus 50 ~~~~gI~lLe~ll~~~~p~------~~rd~lY~LAv~~~kl~~Y~~A~~y~~~lL~ieP~n~QA~~Lk~~ie~~~~k 120 (152)
T 1pc2_A 50 DIRKGIVLLEELLPKGSKE------EQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELERLIDKAMKK 120 (152)
T ss_dssp HHHHHHHHHHHHHHHSCHH------HHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCcc------chHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Confidence 3446788888888866 41 57999999999777788987 999999999999988888877643
No 114
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=85.80 E-value=0.77 Score=38.44 Aligned_cols=65 Identities=5% Similarity=-0.079 Sum_probs=54.0
Q ss_pred HHhcccchhHhHHhhhhccccccccCCCCChhHHHH----------------HHHHHHhcCccc--------cccCCCCh
Q psy5048 209 ALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTH----------------DYTRLALLLPFL--------QYEFPPEQ 264 (319)
Q Consensus 209 ~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfR----------------rg~~~~~~~~~~--------a~~~dP~n 264 (319)
.....+..|+..+..++..+| +|.-++|- +|..+...++++ +++++|++
T Consensus 15 ~~~g~~~~A~~~~~~al~~~p-------~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~ 87 (208)
T 3urz_A 15 IEAGQNGQAVSYFRQTIALNI-------DRTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELLQKAPNN 87 (208)
T ss_dssp HHTTCHHHHHHHHHHHHHHCH-------HHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHCCCHHHHHHHHHHHHHhCC-------CChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC
Confidence 455788999999999999999 99999999 999777777776 89999999
Q ss_pred hhHHHHHHHHHHHHhH
Q psy5048 265 SQCLPLLGIRAQHQRG 280 (319)
Q Consensus 265 ~~i~~el~~l~~~~k~ 280 (319)
.++...|..+-.....
T Consensus 88 ~~~~~~lg~~~~~~g~ 103 (208)
T 3urz_A 88 VDCLEACAEMQVCRGQ 103 (208)
T ss_dssp HHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHcCC
Confidence 9888877776655443
No 115
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=85.67 E-value=1.5 Score=34.70 Aligned_cols=68 Identities=7% Similarity=-0.097 Sum_probs=52.1
Q ss_pred HHHHhcccchhHhHHhhhhcc------------------ccccccCCCCChhHHHHHHHHHHhcCccc--------cccC
Q psy5048 207 AYALLVKKTPSIHNCFLLSTK------------------SMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEF 260 (319)
Q Consensus 207 ~~~~~~~~~~a~~~c~~vl~~------------------~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~ 260 (319)
.+.....+..|+.....++.. +| .++.+++.+|..+..+++|. |+++
T Consensus 20 ~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~ 92 (162)
T 3rkv_A 20 ELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDR-------KNIPLYANMSQCYLNIGDLHEAEETSSEVLKR 92 (162)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHH-------THHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHH-------HHHHHHHHHHHHHHhcCcHHHHHHHHHHHHhc
Confidence 335567788888888888886 56 88999999999777777875 8999
Q ss_pred CCChhhHHHHHHHHHHHHhHh
Q psy5048 261 PPEQSQCLPLLGIRAQHQRGH 281 (319)
Q Consensus 261 dP~n~~i~~el~~l~~~~k~~ 281 (319)
+|.+..+.-.+..+-.....+
T Consensus 93 ~p~~~~a~~~~g~~~~~~g~~ 113 (162)
T 3rkv_A 93 EETNEKALFRRAKARIAAWKL 113 (162)
T ss_dssp STTCHHHHHHHHHHHHHTTCH
T ss_pred CCcchHHHHHHHHHHHHHhcH
Confidence 999987777666665554443
No 116
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=85.65 E-value=0.58 Score=47.32 Aligned_cols=78 Identities=10% Similarity=-0.132 Sum_probs=57.7
Q ss_pred HHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHH
Q psy5048 207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQ 278 (319)
Q Consensus 207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~ 278 (319)
++..+.++..|+..+..+++.+| +|..|+|.+|..+...++++ |++++|++.++...|..+-.+.
T Consensus 442 ~~~~~g~~~~A~~~~~~al~~~p-------~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~lg~~~~~~ 514 (681)
T 2pzi_A 442 ALLDLGDVAKATRKLDDLAERVG-------WRWRLVWYRAVAELLTGDYDSATKHFTEVLDTFPGELAPKLALAATAELA 514 (681)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHH
T ss_pred HHHhcCCHHHHHHHHHHHhccCc-------chHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHc
Confidence 33455778888999999998888 89999999998666667765 7888888888888777776666
Q ss_pred hHhHHHHHHHHHhcc
Q psy5048 279 RGHMITQGSLYFFLF 293 (319)
Q Consensus 279 k~~~~kek~~y~~mF 293 (319)
..+.+ ...|....
T Consensus 515 g~~~~--~~~~~~al 527 (681)
T 2pzi_A 515 GNTDE--HKFYQTVW 527 (681)
T ss_dssp TCCCT--TCHHHHHH
T ss_pred CChHH--HHHHHHHH
Confidence 55544 44444443
No 117
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=85.39 E-value=1.5 Score=32.57 Aligned_cols=79 Identities=9% Similarity=-0.133 Sum_probs=55.7
Q ss_pred HHhcccchhHhHHhhhhccccccccCCCCCh---hHHHHHHHHHHhcCccc--------cccCCCCh---hhHHHHHHHH
Q psy5048 209 ALLVKKTPSIHNCFLLSTKSMLTFARNQSTI---PAWTHDYTRLALLLPFL--------QYEFPPEQ---SQCLPLLGIR 274 (319)
Q Consensus 209 ~~~~~~~~a~~~c~~vl~~~~l~~~~~~~Nv---KALfRrg~~~~~~~~~~--------a~~~dP~n---~~i~~el~~l 274 (319)
.....+..|+..+..++...| ++. .++|..|..+...+++. +++.+|++ .++...+..+
T Consensus 13 ~~~~~~~~A~~~~~~~~~~~p-------~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~la~~ 85 (129)
T 2xev_A 13 LKNGKYDDASQLFLSFLELYP-------NGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLLKLGLS 85 (129)
T ss_dssp HHTTCHHHHHHHHHHHHHHCS-------SSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHH
T ss_pred HHhCCHHHHHHHHHHHHHHCC-------CCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHHHHHHHH
Confidence 456788899999999999888 787 89999999777778876 78899998 5555555544
Q ss_pred HHHHhHhHHHHHHHHHhcccC
Q psy5048 275 AQHQRGHMITQGSLYFFLFYN 295 (319)
Q Consensus 275 ~~~~k~~~~kek~~y~~mF~~ 295 (319)
-.... ...+-...|..+...
T Consensus 86 ~~~~g-~~~~A~~~~~~~~~~ 105 (129)
T 2xev_A 86 QYGEG-KNTEAQQTLQQVATQ 105 (129)
T ss_dssp HHHTT-CHHHHHHHHHHHHHH
T ss_pred HHHcC-CHHHHHHHHHHHHHH
Confidence 44332 233334455555543
No 118
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=85.33 E-value=1.3 Score=37.35 Aligned_cols=62 Identities=11% Similarity=-0.018 Sum_probs=45.2
Q ss_pred HHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhc-----------Cccc--------cccCCCChhhH
Q psy5048 207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALL-----------LPFL--------QYEFPPEQSQC 267 (319)
Q Consensus 207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~-----------~~~~--------a~~~dP~n~~i 267 (319)
++....++..|+..+..+++.+| +|..+++.+|..+... ++++ +++++|++..+
T Consensus 48 ~~~~~g~~~~A~~~~~~al~~~P-------~~~~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~~~~ 120 (217)
T 2pl2_A 48 TQLKLGLVNPALENGKTLVARTP-------RYLGGYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERVNPRYAPL 120 (217)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHhCC-------CcHHHHHHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHhCcccHHH
Confidence 44566778888888888888888 8888888888855555 5554 77788887766
Q ss_pred HHHHHHHH
Q psy5048 268 LPLLGIRA 275 (319)
Q Consensus 268 ~~el~~l~ 275 (319)
...|..+-
T Consensus 121 ~~~lg~~~ 128 (217)
T 2pl2_A 121 HLQRGLVY 128 (217)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66555543
No 119
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=85.14 E-value=2.7 Score=36.97 Aligned_cols=66 Identities=9% Similarity=-0.116 Sum_probs=54.1
Q ss_pred HHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHH
Q psy5048 207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQ 278 (319)
Q Consensus 207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~ 278 (319)
++....++..|+.....++..+| +|..+++.+|..+..+++++ |++++|++..+...+..+-...
T Consensus 13 ~~~~~g~~~~A~~~~~~al~~~p-------~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~ 85 (281)
T 2c2l_A 13 RLFVGRKYPEAAACYGRAITRNP-------LVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQLEM 85 (281)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCS-------CCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHHT
T ss_pred HHHHcCCHHHHHHHHHHHHHhCC-------ccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Confidence 34566889999999999999998 99999999999777777775 8999999987777766655444
Q ss_pred h
Q psy5048 279 R 279 (319)
Q Consensus 279 k 279 (319)
.
T Consensus 86 g 86 (281)
T 2c2l_A 86 E 86 (281)
T ss_dssp T
T ss_pred C
Confidence 3
No 120
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=84.84 E-value=0.98 Score=37.48 Aligned_cols=80 Identities=9% Similarity=-0.146 Sum_probs=52.4
Q ss_pred HHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHH
Q psy5048 207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQ 278 (319)
Q Consensus 207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~ 278 (319)
++.....+..|+..+..++...| ++..+++..|..+...++++ +++.+|.+..+...+..+-.+.
T Consensus 134 ~~~~~~~~~~A~~~~~~~~~~~~-------~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~ 206 (243)
T 2q7f_A 134 VLVKLEQPKLALPYLQRAVELNE-------NDTEARFQFGMCLANEGMLDEALSQFAAVTEQDPGHADAFYNAGVTYAYK 206 (243)
T ss_dssp HHHHTSCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHhccHHHHHHHHHHHHHhCC-------ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHc
Confidence 44566778888888888888777 78888888888665556664 6777888777766666655444
Q ss_pred hHhHHHHHHHHHhccc
Q psy5048 279 RGHMITQGSLYFFLFY 294 (319)
Q Consensus 279 k~~~~kek~~y~~mF~ 294 (319)
.... +-...|..+..
T Consensus 207 ~~~~-~A~~~~~~~~~ 221 (243)
T 2q7f_A 207 ENRE-KALEMLDKAID 221 (243)
T ss_dssp TCTT-HHHHHHHHHHH
T ss_pred cCHH-HHHHHHHHHHc
Confidence 3322 22334444444
No 121
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=84.33 E-value=1.7 Score=37.72 Aligned_cols=62 Identities=10% Similarity=-0.008 Sum_probs=51.7
Q ss_pred HHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHH
Q psy5048 207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRA 275 (319)
Q Consensus 207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~ 275 (319)
++.....+..|+..+..++..+| +|..+++..|..+..+++++ +++++|++..+...|..+-
T Consensus 245 ~~~~~g~~~~A~~~~~~a~~~~~-------~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 314 (330)
T 3hym_B 245 VCRKLKKYAEALDYHRQALVLIP-------QNASTYSAIGYIHSLMGNFENAVDYFHTALGLRRDDTFSVTMLGHCI 314 (330)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHST-------TCSHHHHHHHHHHHHHTCHHHHHHHHHTTTTTCSCCHHHHHHHHHHH
T ss_pred HHHHhcCHHHHHHHHHHHHhhCc-------cchHHHHHHHHHHHHhccHHHHHHHHHHHHccCCCchHHHHHHHHHH
Confidence 44666888889999999999888 99999999999777677775 8999999988887777644
No 122
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=83.93 E-value=2.7 Score=32.37 Aligned_cols=80 Identities=6% Similarity=-0.191 Sum_probs=59.7
Q ss_pred HHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHH
Q psy5048 207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQ 278 (319)
Q Consensus 207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~ 278 (319)
++.....+..|+..+..++..+| .|..+++.+|..+...+++. +++++|.+..+...+..+-...
T Consensus 22 ~~~~~~~~~~A~~~~~~al~~~~-------~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~ 94 (166)
T 1a17_A 22 DYFKAKDYENAIKFYSQAIELNP-------SNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMAL 94 (166)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHST-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHccCHHHHHHHHHHHHHhCC-------CChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHh
Confidence 44566888999999999999888 99999999999777677775 8889999988877777665544
Q ss_pred hHhHHHHHHHHHhccc
Q psy5048 279 RGHMITQGSLYFFLFY 294 (319)
Q Consensus 279 k~~~~kek~~y~~mF~ 294 (319)
... .+-...|.....
T Consensus 95 ~~~-~~A~~~~~~a~~ 109 (166)
T 1a17_A 95 GKF-RAALRDYETVVK 109 (166)
T ss_dssp TCH-HHHHHHHHHHHH
T ss_pred ccH-HHHHHHHHHHHH
Confidence 332 333344554444
No 123
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=83.81 E-value=1.5 Score=37.54 Aligned_cols=73 Identities=4% Similarity=-0.134 Sum_probs=51.9
Q ss_pred HHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhc----------Cccc--------cccCCCChhhHH
Q psy5048 207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALL----------LPFL--------QYEFPPEQSQCL 268 (319)
Q Consensus 207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~----------~~~~--------a~~~dP~n~~i~ 268 (319)
++.....+..|+..+..++...| .++.+..|+|+.|..+..+ +.++ +++.+|++..+.
T Consensus 157 ~~~~~g~~~~A~~~~~~~l~~~p----~~~~~~~a~~~l~~~~~~~g~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~ 232 (261)
T 3qky_A 157 LYERRELYEAAAVTYEAVFDAYP----DTPWADDALVGAMRAYIAYAEQSVRARQPERYRRAVELYERLLQIFPDSPLLR 232 (261)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCT----TSTTHHHHHHHHHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHCTTCTHHH
T ss_pred HHHHccCHHHHHHHHHHHHHHCC----CCchHHHHHHHHHHHHHHhcccchhhcccchHHHHHHHHHHHHHHCCCChHHH
Confidence 45667899999999999999887 1112678999999955433 3332 888999997776
Q ss_pred HHHHHHHHHHhHhHH
Q psy5048 269 PLLGIRAQHQRGHMI 283 (319)
Q Consensus 269 ~el~~l~~~~k~~~~ 283 (319)
.-+..|....+...+
T Consensus 233 ~a~~~l~~~~~~~~~ 247 (261)
T 3qky_A 233 TAEELYTRARQRLTE 247 (261)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 666666665554443
No 124
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=83.23 E-value=2.9 Score=39.24 Aligned_cols=68 Identities=7% Similarity=-0.062 Sum_probs=55.7
Q ss_pred HHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHH
Q psy5048 207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQ 278 (319)
Q Consensus 207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~ 278 (319)
++.....+..|+..+..++..+| +|+.+++.+|..+..++++. +++++|.+..+...+..+-...
T Consensus 34 ~~~~~g~~~~A~~~~~~al~~~p-------~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~ 106 (537)
T 3fp2_A 34 HFFTAKNFNEAIKYYQYAIELDP-------NEPVFYSNISACYISTGDLEKVIEFTTKALEIKPDHSKALLRRASANESL 106 (537)
T ss_dssp HHHHTTCCC-CHHHHHHHHHHCT-------TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHHhccHHHHHHHHHHHHhhCC-------CCcHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHc
Confidence 44667899999999999999999 99999999999777777775 8899999988887777776555
Q ss_pred hHh
Q psy5048 279 RGH 281 (319)
Q Consensus 279 k~~ 281 (319)
...
T Consensus 107 g~~ 109 (537)
T 3fp2_A 107 GNF 109 (537)
T ss_dssp TCH
T ss_pred CCH
Confidence 443
No 125
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=82.97 E-value=5.1 Score=28.99 Aligned_cols=67 Identities=7% Similarity=-0.014 Sum_probs=53.4
Q ss_pred HHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHH
Q psy5048 207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQ 278 (319)
Q Consensus 207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~ 278 (319)
++.....+..|+.....++..+| ++..+++.+|..+...++++ +++++|.+..+...+..+-.+.
T Consensus 21 ~~~~~~~~~~A~~~~~~~~~~~~-------~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (131)
T 2vyi_A 21 EQMKVENFEAAVHFYGKAIELNP-------ANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRMGLALSSL 93 (131)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHccCHHHHHHHHHHHHHcCC-------CCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccCHHHHHHHHHHHHHh
Confidence 34556788889999999999888 99999999999777677775 8889999988877777665554
Q ss_pred hH
Q psy5048 279 RG 280 (319)
Q Consensus 279 k~ 280 (319)
..
T Consensus 94 ~~ 95 (131)
T 2vyi_A 94 NK 95 (131)
T ss_dssp TC
T ss_pred CC
Confidence 43
No 126
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=82.64 E-value=2.9 Score=37.11 Aligned_cols=58 Identities=10% Similarity=-0.078 Sum_probs=29.1
Q ss_pred cccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHH
Q psy5048 212 VKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQ 276 (319)
Q Consensus 212 ~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~ 276 (319)
.++..|+.....+++.+| +|..+++.+|..+..++.++ |++++|+|.++...|..+-.
T Consensus 180 ~~~~eA~~~~~~~l~~~p-------~~~~~~~~la~~~~~~g~~~eA~~~l~~al~~~p~~~~~l~~l~~~~~ 245 (291)
T 3mkr_A 180 EKLQDAYYIFQEMADKCS-------PTLLLLNGQAACHMAQGRWEAAEGVLQEALDKDSGHPETLINLVVLSQ 245 (291)
T ss_dssp THHHHHHHHHHHHHHHSC-------CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCC-------CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 344455555555555555 55555555555444444443 55555555555444443333
No 127
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=82.15 E-value=3.3 Score=35.31 Aligned_cols=64 Identities=11% Similarity=-0.175 Sum_probs=49.1
Q ss_pred HHHhcccchhHhHHhhhhccccccccCCCCC---hhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHH
Q psy5048 208 YALLVKKTPSIHNCFLLSTKSMLTFARNQST---IPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQ 276 (319)
Q Consensus 208 ~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~N---vKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~ 276 (319)
+....++..|+..+..++...| ++ ..|+|.+|..+...+++. ++++.|++.....-+-.+..
T Consensus 25 ~~~~g~~~~A~~~~~~~l~~~p-------~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~ 97 (261)
T 3qky_A 25 FYNQGKYDRAIEYFKAVFTYGR-------THEWAADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQAEYERAM 97 (261)
T ss_dssp HHHTTCHHHHHHHHHHHGGGCS-------CSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHH
T ss_pred HHHhCCHHHHHHHHHHHHHhCC-------CCcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHHHHHHHH
Confidence 3556889999999999999888 77 999999999777778886 88888877655444444444
Q ss_pred HH
Q psy5048 277 HQ 278 (319)
Q Consensus 277 ~~ 278 (319)
..
T Consensus 98 ~~ 99 (261)
T 3qky_A 98 CY 99 (261)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 128
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=81.65 E-value=3 Score=40.43 Aligned_cols=82 Identities=6% Similarity=-0.252 Sum_probs=62.5
Q ss_pred HHHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHH
Q psy5048 206 SAYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQH 277 (319)
Q Consensus 206 ~~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~ 277 (319)
.++..+.++..|+..+..+++.+| +|..+++..|..+...++++ +++++|++..+...|..+-..
T Consensus 65 ~~~~~~g~~~~A~~~~~~al~~~p-------~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~ 137 (568)
T 2vsy_A 65 RVRWTQQRHAEAAVLLQQASDAAP-------EHPGIALWLGHALEDAGQAEAAAAAYTRAHQLLPEEPYITAQLLNWRRR 137 (568)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHCCCHHHHHHHHHHHHhcCC-------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 355677889999999999999998 99999999999777777775 889999999888888777766
Q ss_pred Hh--HhHHHHHHHHHhccc
Q psy5048 278 QR--GHMITQGSLYFFLFY 294 (319)
Q Consensus 278 ~k--~~~~kek~~y~~mF~ 294 (319)
.. ...++-...|.....
T Consensus 138 ~~~~g~~~~A~~~~~~al~ 156 (568)
T 2vsy_A 138 LCDWRALDVLSAQVRAAVA 156 (568)
T ss_dssp TTCCTTHHHHHHHHHHHHH
T ss_pred hhccccHHHHHHHHHHHHh
Confidence 51 223333444444444
No 129
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=81.60 E-value=2.1 Score=43.18 Aligned_cols=60 Identities=5% Similarity=-0.241 Sum_probs=44.4
Q ss_pred HHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHH
Q psy5048 207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIR 274 (319)
Q Consensus 207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l 274 (319)
++..+.++.. +..+..+++.+| +|..|+|.+|..+..+++++ |++++|++.++...+..+
T Consensus 510 ~~~~~g~~~~-~~~~~~al~~~P-------~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~~~~~ 577 (681)
T 2pzi_A 510 TAELAGNTDE-HKFYQTVWSTND-------GVISAAFGLARARSAEGDRVGAVRTLDEVPPTSRHFTTARLTSAVT 577 (681)
T ss_dssp HHHHHTCCCT-TCHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHTSCTTSTTHHHHHHHHHHH
T ss_pred HHHHcCChHH-HHHHHHHHHhCC-------chHHHHHHHHHHHHHcCCHHHHHHHHHhhcccCcccHHHHHHHHHH
Confidence 3345566777 777777877777 88889998888777777775 888899887777655554
No 130
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=81.36 E-value=2.5 Score=31.86 Aligned_cols=78 Identities=4% Similarity=-0.274 Sum_probs=57.6
Q ss_pred HHhcccchhHhHHhhhhccccccccCCCCC---hhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHH
Q psy5048 209 ALLVKKTPSIHNCFLLSTKSMLTFARNQST---IPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQH 277 (319)
Q Consensus 209 ~~~~~~~~a~~~c~~vl~~~~l~~~~~~~N---vKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~ 277 (319)
.....+..|+.....+++.+| ++ ..+++.+|..+...++++ +++++|.+..+...+..+-..
T Consensus 39 ~~~~~~~~A~~~~~~a~~~~~-------~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~ 111 (148)
T 2dba_A 39 FKCGDYGGALAAYTQALGLDA-------TPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDVKALYRRSQALEK 111 (148)
T ss_dssp HTTTCHHHHHHHHHHHHTSCC-------CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHhCCHHHHHHHHHHHHHHcc-------cchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccCHHHHHHHHHHHHH
Confidence 456788889999999999888 77 999999999777777775 788999998888777776655
Q ss_pred HhHhHHHHHHHHHhccc
Q psy5048 278 QRGHMITQGSLYFFLFY 294 (319)
Q Consensus 278 ~k~~~~kek~~y~~mF~ 294 (319)
..... +-...|.....
T Consensus 112 ~~~~~-~A~~~~~~al~ 127 (148)
T 2dba_A 112 LGRLD-QAVLDLQRCVS 127 (148)
T ss_dssp HTCHH-HHHHHHHHHHH
T ss_pred cCCHH-HHHHHHHHHHH
Confidence 44432 33344444443
No 131
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=80.88 E-value=4.3 Score=34.02 Aligned_cols=60 Identities=5% Similarity=-0.281 Sum_probs=44.5
Q ss_pred HHHHHhcccchhHhHHhhhhccccccccCCCCChh---HHHHHHHHHHh------------------cCccc--------
Q psy5048 206 SAYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIP---AWTHDYTRLAL------------------LLPFL-------- 256 (319)
Q Consensus 206 ~~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvK---ALfRrg~~~~~------------------~~~~~-------- 256 (319)
.++.....+..|+.....+++..| +|.. |+|++|..+.. .++++
T Consensus 49 ~~~~~~~~~~~A~~~~~~~l~~~P-------~~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~ 121 (225)
T 2yhc_A 49 YAYYKNADLPLAQAAIDRFIRLNP-------THPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSK 121 (225)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCT-------TCTTHHHHHHHHHHHHHHHHC--------------CCHHHHHHHHHHHH
T ss_pred HHHHhcCCHHHHHHHHHHHHHHCc-------CCCcHHHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHH
Confidence 355777999999999999999998 8876 89999984432 12222
Q ss_pred cccCCCChhhHHHHHH
Q psy5048 257 QYEFPPEQSQCLPLLG 272 (319)
Q Consensus 257 a~~~dP~n~~i~~el~ 272 (319)
+++.+|++..+..-+.
T Consensus 122 ~l~~~P~~~~a~~a~~ 137 (225)
T 2yhc_A 122 LVRGYPNSQYTTDATK 137 (225)
T ss_dssp HHTTCTTCTTHHHHHH
T ss_pred HHHHCcCChhHHHHHH
Confidence 8889999875554333
No 132
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=80.69 E-value=2 Score=35.59 Aligned_cols=55 Identities=13% Similarity=0.033 Sum_probs=45.6
Q ss_pred HHHHhcccchhHhHHhhhhccccccccCCCC-------Chh-----HHHHHHHHHHhcCccc--------cccC------
Q psy5048 207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQS-------TIP-----AWTHDYTRLALLLPFL--------QYEF------ 260 (319)
Q Consensus 207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~-------NvK-----ALfRrg~~~~~~~~~~--------a~~~------ 260 (319)
+...+.++..|+..+.++|+.+| + +.. +++.||..+..++.|+ |+++
T Consensus 20 ~l~~~g~~eeAi~~Y~kAL~l~p-------~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~~e 92 (159)
T 2hr2_A 20 RQLVAGEYDEAAANCRRAMEISH-------TMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNRRGE 92 (159)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHHT-------TSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHCCCHHHHHHHHHHHHhhCC-------CCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhcccc
Confidence 44567899999999999999998 5 555 9999999888888886 8888
Q ss_pred -CCChhhHH
Q psy5048 261 -PPEQSQCL 268 (319)
Q Consensus 261 -dP~n~~i~ 268 (319)
+|++..+.
T Consensus 93 ~~pd~~~A~ 101 (159)
T 2hr2_A 93 LNQDEGKLW 101 (159)
T ss_dssp TTSTHHHHH
T ss_pred CCCchHHHH
Confidence 99987665
No 133
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=79.86 E-value=4.7 Score=31.95 Aligned_cols=85 Identities=12% Similarity=-0.081 Sum_probs=64.2
Q ss_pred HHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHH-HHhcCcc--c--------cccCCCChhhHHHHHHHHH
Q psy5048 207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTR-LALLLPF--L--------QYEFPPEQSQCLPLLGIRA 275 (319)
Q Consensus 207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~-~~~~~~~--~--------a~~~dP~n~~i~~el~~l~ 275 (319)
++.....+..|+.....++..+| +|..+++..|.. +...+.+ . +++++|.+..+...|..+-
T Consensus 53 ~~~~~~~~~~A~~~~~~al~~~p-------~~~~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~ 125 (177)
T 2e2e_A 53 YYLWQNDYSNSLLAYRQALQLRG-------ENAELYAALATVLYYQASQHMTAQTRAMIDKALALDSNEITALMLLASDA 125 (177)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHC-------SCHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHcCC-------CCHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Confidence 44667889999999999999998 999999999997 6566665 3 8889999998888887776
Q ss_pred HHHhHhHHHHHHHHHhcccCCCCC
Q psy5048 276 QHQRGHMITQGSLYFFLFYNMSSP 299 (319)
Q Consensus 276 ~~~k~~~~kek~~y~~mF~~~~~~ 299 (319)
...... .+-...|...+...+..
T Consensus 126 ~~~g~~-~~A~~~~~~al~~~p~~ 148 (177)
T 2e2e_A 126 FMQANY-AQAIELWQKVMDLNSPR 148 (177)
T ss_dssp HHTTCH-HHHHHHHHHHHHTCCTT
T ss_pred HHcccH-HHHHHHHHHHHhhCCCC
Confidence 655443 33445566666554443
No 134
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=79.39 E-value=5 Score=28.73 Aligned_cols=81 Identities=14% Similarity=-0.027 Sum_probs=58.2
Q ss_pred HHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHH
Q psy5048 207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQ 278 (319)
Q Consensus 207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~ 278 (319)
++.....+..++..+..++...| ++..+++..|..+...++++ +++++|.+..+...+..+-...
T Consensus 18 ~~~~~~~~~~A~~~~~~~~~~~~-------~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~ 90 (125)
T 1na0_A 18 AYYKQGDYDEAIEYYQKALELDP-------NNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQ 90 (125)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHcCCHHHHHHHHHHHHHHCc-------CcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHh
Confidence 44566888889999999998888 89999999999777677775 7788999887777666655443
Q ss_pred hHhHHHHHHHHHhcccC
Q psy5048 279 RGHMITQGSLYFFLFYN 295 (319)
Q Consensus 279 k~~~~kek~~y~~mF~~ 295 (319)
.. ..+-...|..+...
T Consensus 91 ~~-~~~A~~~~~~~~~~ 106 (125)
T 1na0_A 91 GD-YDEAIEYYQKALEL 106 (125)
T ss_dssp TC-HHHHHHHHHHHHHH
T ss_pred cC-HHHHHHHHHHHHHh
Confidence 32 23334455555543
No 135
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=79.24 E-value=2.1 Score=38.06 Aligned_cols=47 Identities=4% Similarity=-0.308 Sum_probs=31.6
Q ss_pred hHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc---------cccCCCChhhHHHH
Q psy5048 217 SIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL---------QYEFPPEQSQCLPL 270 (319)
Q Consensus 217 a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~---------a~~~dP~n~~i~~e 270 (319)
|+.....++..+| +|.-+|+..|..+..++.+. +++++|++..|...
T Consensus 219 A~~~l~~al~~~p-------~~~~~l~~l~~~~~~~g~~~eaa~~~~~~~~~~~P~~~~~~d~ 274 (291)
T 3mkr_A 219 AEGVLQEALDKDS-------GHPETLINLVVLSQHLGKPPEVTNRYLSQLKDAHRSHPFIKEY 274 (291)
T ss_dssp HHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHHHHhCC-------CCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCCChHHHHH
Confidence 5666667777777 88888888877554444442 67778887776653
No 136
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=79.07 E-value=5.1 Score=36.31 Aligned_cols=66 Identities=11% Similarity=-0.043 Sum_probs=53.7
Q ss_pred HHHHhcccchhHhHHhhhhccccccccCCCCC---------------hhHHHHHHHHHHhcCccc--------cccCCCC
Q psy5048 207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQST---------------IPAWTHDYTRLALLLPFL--------QYEFPPE 263 (319)
Q Consensus 207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~N---------------vKALfRrg~~~~~~~~~~--------a~~~dP~ 263 (319)
++....++..|+.....++...| ++ +.+++.+|..+..+++|. |++++|.
T Consensus 156 ~~~~~g~~~~A~~~y~~Al~~~p-------~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~ 228 (336)
T 1p5q_A 156 VYFKEGKYKQALLQYKKIVSWLE-------YESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSN 228 (336)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHTT-------TCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHCCCHHHHHHHHHHHHHHhh-------ccccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 55677899999999999999888 77 799999999777778876 9999999
Q ss_pred hhhHHHHHHHHHHHHh
Q psy5048 264 QSQCLPLLGIRAQHQR 279 (319)
Q Consensus 264 n~~i~~el~~l~~~~k 279 (319)
+..+...+..+-....
T Consensus 229 ~~~a~~~lg~~~~~~g 244 (336)
T 1p5q_A 229 NEKGLSRRGEAHLAVN 244 (336)
T ss_dssp CHHHHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHHHHCC
Confidence 9877766666554443
No 137
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=78.81 E-value=2.8 Score=34.71 Aligned_cols=59 Identities=10% Similarity=-0.073 Sum_probs=45.1
Q ss_pred HhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCcc-----------c-------cccCCCChhhHHHHH
Q psy5048 210 LLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPF-----------L-------QYEFPPEQSQCLPLL 271 (319)
Q Consensus 210 ~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~-----------~-------a~~~dP~n~~i~~el 271 (319)
....+..+++.+..+++.+| ++.-||++.|..+..++.+ + |+++||++.++.--|
T Consensus 14 r~~~feeA~~~~~~Ai~l~P-------~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~L 86 (158)
T 1zu2_A 14 RILLFEQIRQDAENTYKSNP-------LDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCI 86 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHhHHHHHHHHHHHHHHHCC-------CCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHH
Confidence 34557889999999999999 9999999999966654332 1 999999998765555
Q ss_pred HHHH
Q psy5048 272 GIRA 275 (319)
Q Consensus 272 ~~l~ 275 (319)
-..=
T Consensus 87 G~ay 90 (158)
T 1zu2_A 87 GNAY 90 (158)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4443
No 138
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=78.79 E-value=4.5 Score=33.98 Aligned_cols=61 Identities=8% Similarity=-0.227 Sum_probs=42.5
Q ss_pred HHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHH
Q psy5048 207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIR 274 (319)
Q Consensus 207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l 274 (319)
++.....+..|+..+..++..+| +|..+++..|..+...++++ +++++|.+......+..+
T Consensus 86 ~~~~~~~~~~A~~~~~~al~~~~-------~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~ 154 (275)
T 1xnf_A 86 YLTQAGNFDAAYEAFDSVLELDP-------TYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPNDPFRSLWLYLA 154 (275)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCT-------TCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHccCHHHHHHHHHHHHhcCc-------cccHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCChHHHHHHHHH
Confidence 33455677777888888887777 78888888888666666665 677788876555544443
No 139
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=78.74 E-value=5.3 Score=33.50 Aligned_cols=83 Identities=10% Similarity=-0.102 Sum_probs=62.2
Q ss_pred hHHHHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHH
Q psy5048 204 CSSAYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRA 275 (319)
Q Consensus 204 ~~~~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~ 275 (319)
.-.++.....+..|+..+..++..+| +|..+++..|..+...++++ +++++|.+..+...+..+-
T Consensus 49 l~~~~~~~~~~~~A~~~~~~al~~~~-------~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~ 121 (275)
T 1xnf_A 49 RGVLYDSLGLRALARNDFSQALAIRP-------DMPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIAL 121 (275)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCC-------CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHH
T ss_pred HHHHHHHcccHHHHHHHHHHHHHcCC-------CcHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCccccHHHHHHHHHH
Confidence 33455777899999999999999998 99999999999777777775 8899999988877777665
Q ss_pred HHHhHhHHHHHHHHHhccc
Q psy5048 276 QHQRGHMITQGSLYFFLFY 294 (319)
Q Consensus 276 ~~~k~~~~kek~~y~~mF~ 294 (319)
..... ..+-...|..+..
T Consensus 122 ~~~g~-~~~A~~~~~~a~~ 139 (275)
T 1xnf_A 122 YYGGR-DKLAQDDLLAFYQ 139 (275)
T ss_dssp HHTTC-HHHHHHHHHHHHH
T ss_pred HHhcc-HHHHHHHHHHHHH
Confidence 54333 2333444555544
No 140
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=78.42 E-value=3.6 Score=30.34 Aligned_cols=46 Identities=4% Similarity=-0.231 Sum_probs=37.4
Q ss_pred cchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhh
Q psy5048 214 KTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQ 266 (319)
Q Consensus 214 ~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~ 266 (319)
...+.....++|..|| +|++|++=.|..+...++|. +++.+|.+..
T Consensus 25 ~~~A~~~l~~AL~~dp-------~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~~~ 78 (93)
T 3bee_A 25 TDEVSLLLEQALQLEP-------YNEAALSLIANDHFISFRFQEAIDTWVLLLDSNDPNLD 78 (93)
T ss_dssp CHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCTTCC
T ss_pred CHHHHHHHHHHHHHCc-------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCcc
Confidence 4567888889999999 99999999999776677776 7888888543
No 141
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=78.17 E-value=3.9 Score=33.85 Aligned_cols=58 Identities=14% Similarity=0.053 Sum_probs=37.3
Q ss_pred HHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCC------CChhhHHHHHHH
Q psy5048 209 ALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFP------PEQSQCLPLLGI 273 (319)
Q Consensus 209 ~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~d------P~n~~i~~el~~ 273 (319)
.....+..|+..+..+++.+| ++..+++..|..+...+++. +++++ |.|..+...|.+
T Consensus 184 ~~~~~~~~A~~~~~~al~~~~-------~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~p~~~~~~~~l~~ 255 (258)
T 3uq3_A 184 AKLMSFPEAIADCNKAIEKDP-------NFVRAYIRKATAQIAVKEYASALETLDAARTKDAEVNNGSSAREIDQLYYK 255 (258)
T ss_dssp HHTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHH
T ss_pred HHhCCHHHHHHHHHHHHHhCH-------HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhChhhcCCCchHHHHHHHHH
Confidence 344566667777777777666 67777777777555556554 56666 666666666554
No 142
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=77.89 E-value=4.7 Score=39.02 Aligned_cols=80 Identities=10% Similarity=-0.158 Sum_probs=61.3
Q ss_pred HHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHH
Q psy5048 207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQ 278 (319)
Q Consensus 207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~ 278 (319)
++....++..|+..+..+++.+| +|..+++..|..+...++++ +++++|++..+...|..+-...
T Consensus 32 ~~~~~g~~~~A~~~~~~al~~~p-------~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~ 104 (568)
T 2vsy_A 32 AELGMGDTTAGEMAVQRGLALHP-------GHPEAVARLGRVRWTQQRHAEAAVLLQQASDAAPEHPGIALWLGHALEDA 104 (568)
T ss_dssp HHHHHTCHHHHHHHHHHHHTTST-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHcCCHHHHHHHHHHHHHhCC-------CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHc
Confidence 44667889999999999999998 99999999999777777776 8899999988888887766554
Q ss_pred hHhHHHHHHHHHhccc
Q psy5048 279 RGHMITQGSLYFFLFY 294 (319)
Q Consensus 279 k~~~~kek~~y~~mF~ 294 (319)
... ++-.+.|.....
T Consensus 105 g~~-~~A~~~~~~al~ 119 (568)
T 2vsy_A 105 GQA-EAAAAAYTRAHQ 119 (568)
T ss_dssp TCH-HHHHHHHHHHHH
T ss_pred CCH-HHHHHHHHHHHH
Confidence 443 223334444443
No 143
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=77.83 E-value=2.8 Score=30.46 Aligned_cols=46 Identities=9% Similarity=-0.196 Sum_probs=35.9
Q ss_pred CCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHHhH
Q psy5048 235 NQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQRG 280 (319)
Q Consensus 235 ~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~k~ 280 (319)
+++|..++|..|..+...++++ +++++|++..+...|..+-.....
T Consensus 3 ~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~ 56 (100)
T 3ma5_A 3 DPEDPFTRYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYERLDR 56 (100)
T ss_dssp --CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTC
T ss_pred CccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCC
Confidence 4599999999999777778886 899999998887777766555443
No 144
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=77.62 E-value=3.2 Score=39.92 Aligned_cols=64 Identities=5% Similarity=-0.218 Sum_probs=52.4
Q ss_pred HhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHHhH
Q psy5048 210 LLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQRG 280 (319)
Q Consensus 210 ~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~k~ 280 (319)
...++..|+....++++.+| +|..+++.+|..+..+++++ |++++|.+..+...|..+-..+..
T Consensus 18 ~~g~~~~A~~~~~~Al~~~p-------~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~ 89 (477)
T 1wao_1 18 KAKDYENAIKFYSQAIELNP-------SNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMALGK 89 (477)
T ss_dssp TTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHTC
T ss_pred HhCCHHHHHHHHHHHHHhCC-------ccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC
Confidence 45678889999999999998 99999999999887777776 899999998877777666554443
No 145
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=77.57 E-value=3.6 Score=29.05 Aligned_cols=51 Identities=8% Similarity=-0.043 Sum_probs=41.9
Q ss_pred HHHHhcccchhHhHHhhhhccccccccCCCC--ChhHHHHHHHHHHhc-Cccc--------cccCCCCh
Q psy5048 207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQS--TIPAWTHDYTRLALL-LPFL--------QYEFPPEQ 264 (319)
Q Consensus 207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~--NvKALfRrg~~~~~~-~~~~--------a~~~dP~n 264 (319)
++.....+..|+..+..++..+| + +..+++..|..+..+ ++++ ++..+|.+
T Consensus 49 ~~~~~~~~~~A~~~~~~a~~~~~-------~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~p~~ 110 (112)
T 2kck_A 49 ALYNLERYEEAVDCYNYVINVIE-------DEYNKDVWAAKADALRYIEGKEVEAEIAEARAKLEHHHH 110 (112)
T ss_dssp HHHHTTCHHHHHHHHHHHHHTSC-------CTTCHHHHHHHHHHHTTCSSCSHHHHHHHHHHGGGCCCC
T ss_pred HHHHccCHHHHHHHHHHHHHhCc-------ccchHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhcccCC
Confidence 45667889999999999999888 8 999999999988877 7775 55566653
No 146
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=77.45 E-value=3.4 Score=38.38 Aligned_cols=59 Identities=5% Similarity=-0.202 Sum_probs=50.0
Q ss_pred hcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHH
Q psy5048 211 LVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQ 276 (319)
Q Consensus 211 ~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~ 276 (319)
...+..|+..+..++..+| ++..+++..|..+...++++ +++++|++.++...+..+..
T Consensus 428 ~~~~~~A~~~~~~a~~~~~-------~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~ 494 (514)
T 2gw1_A 428 VENFIEATNLLEKASKLDP-------RSEQAKIGLAQMKLQQEDIDEAITLFEESADLARTMEEKLQAITFAEA 494 (514)
T ss_dssp TTHHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCc-------ccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhccccHHHHHHHHHHHH
Confidence 6778889999999999888 99999999999777777775 89999999998887755543
No 147
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=76.41 E-value=4.6 Score=35.67 Aligned_cols=67 Identities=13% Similarity=0.011 Sum_probs=54.3
Q ss_pred HHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHH
Q psy5048 207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQ 278 (319)
Q Consensus 207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~ 278 (319)
++.....+..|+..+..++..+| ++..+++..|..+...++++ +++++|.+..+...|..+-.+.
T Consensus 226 ~~~~~g~~~~A~~~~~~al~~~~-------~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~ 298 (368)
T 1fch_A 226 LFNLSGEYDKAVDCFTAALSVRP-------NDYLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIRSRYNLGISCINL 298 (368)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHhCc-------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHC
Confidence 44566888889999999999888 99999999999777677775 8889999988887777776555
Q ss_pred hH
Q psy5048 279 RG 280 (319)
Q Consensus 279 k~ 280 (319)
..
T Consensus 299 g~ 300 (368)
T 1fch_A 299 GA 300 (368)
T ss_dssp TC
T ss_pred CC
Confidence 44
No 148
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=76.19 E-value=9.6 Score=30.86 Aligned_cols=68 Identities=9% Similarity=-0.139 Sum_probs=52.6
Q ss_pred HHHHhcccchhHhHHhhhhccccccccCCCCCh----------------hHHHHHHHHHHhcCccc--------cccCCC
Q psy5048 207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTI----------------PAWTHDYTRLALLLPFL--------QYEFPP 262 (319)
Q Consensus 207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~Nv----------------KALfRrg~~~~~~~~~~--------a~~~dP 262 (319)
++.....+..|+.....++...| ++. .+++.+|..+..+++++ +++++|
T Consensus 47 ~~~~~~~~~~A~~~~~~al~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p 119 (198)
T 2fbn_A 47 EFFKKNEINEAIVKYKEALDFFI-------HTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASKVLKIDK 119 (198)
T ss_dssp HHHHTTCHHHHHHHHHHHHHTTT-------TCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST
T ss_pred HHHHcCCHHHHHHHHHHHHHHHh-------cccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCc
Confidence 34566888999999999998777 555 89999999777777775 889999
Q ss_pred ChhhHHHHHHHHHHHHhHh
Q psy5048 263 EQSQCLPLLGIRAQHQRGH 281 (319)
Q Consensus 263 ~n~~i~~el~~l~~~~k~~ 281 (319)
.+..+...+..+-....+.
T Consensus 120 ~~~~~~~~lg~~~~~~~~~ 138 (198)
T 2fbn_A 120 NNVKALYKLGVANMYFGFL 138 (198)
T ss_dssp TCHHHHHHHHHHHHHHTCH
T ss_pred ccHHHHHHHHHHHHHcccH
Confidence 9988777776665554443
No 149
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=75.72 E-value=4.3 Score=35.87 Aligned_cols=81 Identities=11% Similarity=-0.048 Sum_probs=60.6
Q ss_pred HHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHH
Q psy5048 207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQ 278 (319)
Q Consensus 207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~ 278 (319)
++.....+..|+..+..+++.+| +|..+++.+|..+...++++ +++++|.+..+...|..+-...
T Consensus 73 ~~~~~g~~~~A~~~~~~al~~~p-------~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~ 145 (368)
T 1fch_A 73 RRLQEGDLPNAVLLFEAAVQQDP-------KHMEAWQYLGTTQAENEQELLAISALRRCLELKPDNQTALMALAVSFTNE 145 (368)
T ss_dssp HHHHTTCHHHHHHHHHHHHHSCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHCCCHHHHHHHHHHHHHhCC-------CCHHHHHHHHHHHHHCcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHc
Confidence 34566888899999999999888 99999999999777777775 8889999988888777766554
Q ss_pred hHhHHHHHHHHHhcccC
Q psy5048 279 RGHMITQGSLYFFLFYN 295 (319)
Q Consensus 279 k~~~~kek~~y~~mF~~ 295 (319)
... .+-...|..+...
T Consensus 146 g~~-~~A~~~~~~~~~~ 161 (368)
T 1fch_A 146 SLQ-RQACEILRDWLRY 161 (368)
T ss_dssp TCH-HHHHHHHHHHHHT
T ss_pred CCH-HHHHHHHHHHHHh
Confidence 433 3334455555543
No 150
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=75.21 E-value=7.9 Score=29.84 Aligned_cols=80 Identities=9% Similarity=-0.132 Sum_probs=53.9
Q ss_pred HHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHH
Q psy5048 207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQ 278 (319)
Q Consensus 207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~ 278 (319)
++.....+..++..+..++..+| ++..+++..|..+...+++. +++++|.+..+...+..+-...
T Consensus 51 ~~~~~~~~~~A~~~~~~~~~~~~-------~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 123 (186)
T 3as5_A 51 AYVKTGAVDRGTELLERSLADAP-------DNVKVATVLGLTYVQVQKYDLAVPLLIKVAEANPINFNVRFRLGVALDNL 123 (186)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHcCCHHHHHHHHHHHHhcCC-------CCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcHhHHHHHHHHHHHHHc
Confidence 44566778888888888888777 88888888888666666665 7778888877776666655443
Q ss_pred hHhHHHHHHHHHhccc
Q psy5048 279 RGHMITQGSLYFFLFY 294 (319)
Q Consensus 279 k~~~~kek~~y~~mF~ 294 (319)
... .+-...|..+..
T Consensus 124 ~~~-~~A~~~~~~~~~ 138 (186)
T 3as5_A 124 GRF-DEAIDSFKIALG 138 (186)
T ss_dssp TCH-HHHHHHHHHHHH
T ss_pred CcH-HHHHHHHHHHHh
Confidence 332 233334444443
No 151
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=75.08 E-value=5.6 Score=35.80 Aligned_cols=83 Identities=10% Similarity=-0.174 Sum_probs=56.2
Q ss_pred HHHHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHH
Q psy5048 205 SSAYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQ 276 (319)
Q Consensus 205 ~~~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~ 276 (319)
-.++.....+..++..+..+++.+| +|..+++..|..+...++++ +++++|++..+...|..+-.
T Consensus 278 ~~~~~~~g~~~~A~~~~~~al~~~p-------~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~ 350 (388)
T 1w3b_A 278 ANALKEKGSVAEAEDCYNTALRLCP-------THADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQ 350 (388)
T ss_dssp HHHHHHHSCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHTTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHhhCc-------ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Confidence 3455666788888888888888877 88888888888666666664 77888888777776666544
Q ss_pred HHhHhHHHHHHHHHhcccC
Q psy5048 277 HQRGHMITQGSLYFFLFYN 295 (319)
Q Consensus 277 ~~k~~~~kek~~y~~mF~~ 295 (319)
+... .++-...|..+...
T Consensus 351 ~~g~-~~~A~~~~~~a~~~ 368 (388)
T 1w3b_A 351 QQGK-LQEALMHYKEAIRI 368 (388)
T ss_dssp TTTC-CHHHHHHHHHHHTT
T ss_pred HcCC-HHHHHHHHHHHHhh
Confidence 4332 33334455555543
No 152
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=74.94 E-value=5 Score=34.90 Aligned_cols=64 Identities=11% Similarity=-0.011 Sum_probs=49.1
Q ss_pred HHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCC---ChhhHHHHHHHHH
Q psy5048 207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPP---EQSQCLPLLGIRA 275 (319)
Q Consensus 207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP---~n~~i~~el~~l~ 275 (319)
++.....+..|+..+..++..+| ++..+++..|..+...++++ +++++| .+..+...+..+.
T Consensus 46 ~~~~~~~~~~A~~~~~~~~~~~~-------~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 118 (359)
T 3ieg_A 46 VFLAMGKSKAALPDLTKVIALKM-------DFTAARLQRGHLLLKQGKLDEAEDDFKKVLKSNPSEQEEKEAESQLVKAD 118 (359)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHH
T ss_pred HHHHccCHHHHHHHHHHHHHhCC-------CcchHHHHHHHHHHHcCChHHHHHHHHHHHhcCCcccChHHHHHHHHHHH
Confidence 33555778888888888888887 88889998888666667775 788888 7888777777665
Q ss_pred HH
Q psy5048 276 QH 277 (319)
Q Consensus 276 ~~ 277 (319)
..
T Consensus 119 ~~ 120 (359)
T 3ieg_A 119 EM 120 (359)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 153
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=74.87 E-value=4.9 Score=35.76 Aligned_cols=67 Identities=16% Similarity=0.008 Sum_probs=54.4
Q ss_pred HHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHH
Q psy5048 207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQ 278 (319)
Q Consensus 207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~ 278 (319)
++.....+..|+..+..++..+| +|..+++..|..+...++++ +++++|++..+...|..+-.+.
T Consensus 222 ~~~~~g~~~~A~~~~~~al~~~p-------~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~ 294 (365)
T 4eqf_A 222 LFHLSGEFNRAIDAFNAALTVRP-------EDYSLWNRLGATLANGDRSEEAVEAYTRALEIQPGFIRSRYNLGISCINL 294 (365)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHHCCCHHHHHHHHHHHHHhCC-------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHC
Confidence 44666888899999999999888 99999999999777777775 8889999988877777665554
Q ss_pred hH
Q psy5048 279 RG 280 (319)
Q Consensus 279 k~ 280 (319)
..
T Consensus 295 g~ 296 (365)
T 4eqf_A 295 GA 296 (365)
T ss_dssp TC
T ss_pred CC
Confidence 43
No 154
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=74.65 E-value=4.9 Score=34.62 Aligned_cols=63 Identities=10% Similarity=-0.111 Sum_probs=42.7
Q ss_pred HHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcC-ccc--------cccCCCChhhHHHHHHHHHHHH
Q psy5048 209 ALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLL-PFL--------QYEFPPEQSQCLPLLGIRAQHQ 278 (319)
Q Consensus 209 ~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~-~~~--------a~~~dP~n~~i~~el~~l~~~~ 278 (319)
.....+..++..+..+++.+| +|..+++..|..+...+ .++ +++++|.+..+...+..+-...
T Consensus 67 ~~~~~~~~A~~~~~~~~~~~~-------~~~~~~~~l~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~ 138 (330)
T 3hym_B 67 VELNKANELFYLSHKLVDLYP-------SNPVSWFAVGCYYLMVGHKNEHARRYLSKATTLEKTYGPAWIAYGHSFAVE 138 (330)
T ss_dssp HHHTCHHHHHHHHHHHHHHCT-------TSTHHHHHHHHHHHHSCSCHHHHHHHHHHHHTTCTTCTHHHHHHHHHHHHH
T ss_pred HHhhhHHHHHHHHHHHHHhCc-------CCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHc
Confidence 455677777777777777777 77888888877555555 554 6777777776666555554443
No 155
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=74.58 E-value=3.3 Score=36.89 Aligned_cols=65 Identities=12% Similarity=-0.066 Sum_probs=50.5
Q ss_pred HHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHHh
Q psy5048 208 YALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQR 279 (319)
Q Consensus 208 ~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~k 279 (319)
+.....+..|+..+..++..+| +|..+++..|..+...+++. +++++|.+..+...|..+-....
T Consensus 75 ~~~~g~~~~A~~~~~~al~~~p-------~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g 147 (365)
T 4eqf_A 75 RLKEGDLPVTILFMEAAILQDP-------GDAEAWQFLGITQAENENEQAAIVALQRCLELQPNNLKALMALAVSYTNTS 147 (365)
T ss_dssp HHHHTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred HHHCCCHHHHHHHHHHHHHhCc-------CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHccc
Confidence 3556778888999999988888 89999999999776667775 78889998887777766655443
No 156
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=74.50 E-value=5.6 Score=36.81 Aligned_cols=68 Identities=7% Similarity=-0.082 Sum_probs=51.3
Q ss_pred HHHHhcccchhHhHHhhhhc----------------cccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCC
Q psy5048 207 AYALLVKKTPSIHNCFLLST----------------KSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPP 262 (319)
Q Consensus 207 ~~~~~~~~~~a~~~c~~vl~----------------~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP 262 (319)
++....++..|+....++++ .++ .+..+++.+|..+..+++|+ |++++|
T Consensus 232 ~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~-------~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p 304 (370)
T 1ihg_A 232 TFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQP-------VALSCVLNIGACKLKMSDWQGAVDSCLEALEIDP 304 (370)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHH-------HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCT
T ss_pred HHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHH-------HHHHHHHHHHHHHHhccCHHHHHHHHHHHHHhCc
Confidence 33455777778777777776 566 89999999999777777775 999999
Q ss_pred ChhhHHHHHHHHHHHHhHh
Q psy5048 263 EQSQCLPLLGIRAQHQRGH 281 (319)
Q Consensus 263 ~n~~i~~el~~l~~~~k~~ 281 (319)
.+..+...+..+-....++
T Consensus 305 ~~~~a~~~lg~~~~~~g~~ 323 (370)
T 1ihg_A 305 SNTKALYRRAQGWQGLKEY 323 (370)
T ss_dssp TCHHHHHHHHHHHHHTTCH
T ss_pred hhHHHHHHHHHHHHHccCH
Confidence 9988877776665555443
No 157
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=74.16 E-value=9.3 Score=32.02 Aligned_cols=59 Identities=8% Similarity=-0.018 Sum_probs=43.9
Q ss_pred HHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHH
Q psy5048 207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLG 272 (319)
Q Consensus 207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~ 272 (319)
++.....+..|+..+..+++.+| ++..+++..|..+...++++ +++++|.+..+...+.
T Consensus 83 ~~~~~~~~~~A~~~~~~a~~~~~-------~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~ 149 (272)
T 3u4t_A 83 ILMKKGQDSLAIQQYQAAVDRDT-------TRLDMYGQIGSYFYNKGNFPLAIQYMEKQIRPTTTDPKVFYELG 149 (272)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHST-------TCTHHHHHHHHHHHHTTCHHHHHHHHGGGCCSSCCCHHHHHHHH
T ss_pred HHHHcccHHHHHHHHHHHHhcCc-------ccHHHHHHHHHHHHHccCHHHHHHHHHHHhhcCCCcHHHHHHHH
Confidence 44566777788888888888777 78888888888666666665 7777888777666665
No 158
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=73.86 E-value=4.6 Score=38.50 Aligned_cols=64 Identities=5% Similarity=-0.169 Sum_probs=50.3
Q ss_pred cccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHHh
Q psy5048 212 VKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQR 279 (319)
Q Consensus 212 ~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~k 279 (319)
..+..|+..+..++..+|- ..+|..+++.+|..+..+++++ |++++|++..+...|..+-....
T Consensus 235 g~~~~A~~~~~~al~~~p~----~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~a~~~l~~~~~~lg 306 (474)
T 4abn_A 235 KISQQALSAYAQAEKVDRK----ASSNPDLHLNRATLHKYEESYGEALEGFSQAAALDPAWPEPQQREQQLLEFLS 306 (474)
T ss_dssp HHHHHHHHHHHHHHHHCGG----GGGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHhCCC----cccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHH
Confidence 6688889999998886541 2279999999999887778876 89999999988777766655544
No 159
>2ppn_A FK506-binding protein 1A; high resolution protein structure, isomerase; 0.92A {Homo sapiens} SCOP: d.26.1.1 PDB: 1b6c_A 1a7x_A 1d7h_A 1d7i_A 1d7j_A* 1f40_A* 1fap_A* 1d6o_A* 1fkd_A* 1fkf_A* 1fkg_A* 1fkh_A* 1fki_A* 1fkj_A* 1fkr_A 1fks_A 1fkt_A 1j4h_A* 1j4i_A* 1j4r_A* ...
Probab=73.70 E-value=1.5 Score=33.19 Aligned_cols=19 Identities=32% Similarity=0.340 Sum_probs=16.6
Q ss_pred CCCCCCCCCeeecccceEE
Q psy5048 19 TPCIRPRSTLSLSPYSLSL 37 (319)
Q Consensus 19 ~p~Ipp~atl~~d~~lv~~ 37 (319)
.+.||||++|.|+++++++
T Consensus 88 ~~~Ip~~~~l~f~v~l~~v 106 (107)
T 2ppn_A 88 PGIIPPHATLVFDVELLKL 106 (107)
T ss_dssp TTTBCTTCCEEEEEEEEEE
T ss_pred CCCcCCCCeEEEEEEEEEe
Confidence 4679999999999998875
No 160
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=73.28 E-value=10 Score=30.43 Aligned_cols=40 Identities=5% Similarity=-0.305 Sum_probs=22.8
Q ss_pred HhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhc-Cccc
Q psy5048 210 LLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALL-LPFL 256 (319)
Q Consensus 210 ~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~-~~~~ 256 (319)
....+..++..+..++..+| ++..+++..|..+... ++++
T Consensus 54 ~~~~~~~A~~~~~~a~~~~~-------~~~~~~~~l~~~~~~~~~~~~ 94 (225)
T 2vq2_A 54 YLKVNDKAQESFRQALSIKP-------DSAEINNNYGWFLCGRLNRPA 94 (225)
T ss_dssp HTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHTTTCCHH
T ss_pred HcCChHHHHHHHHHHHHhCC-------CChHHHHHHHHHHHHhcCcHH
Confidence 33555556666666666555 6666666666655544 4443
No 161
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=73.01 E-value=11 Score=31.10 Aligned_cols=66 Identities=8% Similarity=-0.214 Sum_probs=48.0
Q ss_pred HHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHH
Q psy5048 207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQ 278 (319)
Q Consensus 207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~ 278 (319)
++.....+..|+..+..++...| .+..+++..|..+...++++ +++.+|.+..+...+..+-.+.
T Consensus 150 ~~~~~g~~~~A~~~~~~~~~~~~-------~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (252)
T 2ho1_A 150 VSLQMKKPAQAKEYFEKSLRLNR-------NQPSVALEMADLLYKEREYVPARQYYDLFAQGGGQNARSLLLGIRLAKVF 222 (252)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCS-------CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHT
T ss_pred HHHHcCCHHHHHHHHHHHHhcCc-------ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHHc
Confidence 44556777788888888888777 88888888888666666664 7778888877776666665544
Q ss_pred h
Q psy5048 279 R 279 (319)
Q Consensus 279 k 279 (319)
.
T Consensus 223 g 223 (252)
T 2ho1_A 223 E 223 (252)
T ss_dssp T
T ss_pred c
Confidence 3
No 162
>1yat_A FK506 binding protein; HET: FK5; 2.50A {Saccharomyces cerevisiae} SCOP: d.26.1.1
Probab=72.99 E-value=1.6 Score=33.49 Aligned_cols=19 Identities=32% Similarity=0.308 Sum_probs=16.6
Q ss_pred CCCCCCCCCeeecccceEE
Q psy5048 19 TPCIRPRSTLSLSPYSLSL 37 (319)
Q Consensus 19 ~p~Ipp~atl~~d~~lv~~ 37 (319)
.+.||||++|.|+++++++
T Consensus 94 ~~~Ip~~~~l~f~vel~~i 112 (113)
T 1yat_A 94 PGLIPPNSTLVFDVELLKV 112 (113)
T ss_dssp TTTBCTTCCEEEEEEEEEE
T ss_pred CCCcCCCCeEEEEEEEEEe
Confidence 4669999999999999875
No 163
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=72.98 E-value=7.3 Score=30.05 Aligned_cols=66 Identities=9% Similarity=0.027 Sum_probs=53.0
Q ss_pred HHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHH
Q psy5048 207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQ 278 (319)
Q Consensus 207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~ 278 (319)
++.....+..++..+..++...| ++..+++..|..+...++++ +++.+|.+..+...+..+-...
T Consensus 85 ~~~~~~~~~~A~~~~~~~~~~~~-------~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~ 157 (186)
T 3as5_A 85 TYVQVQKYDLAVPLLIKVAEANP-------INFNVRFRLGVALDNLGRFDEAIDSFKIALGLRPNEGKVHRAIAFSYEQM 157 (186)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHhcCHHHHHHHHHHHHhcCc-------HhHHHHHHHHHHHHHcCcHHHHHHHHHHHHhcCccchHHHHHHHHHHHHc
Confidence 44566888889999999999888 99999999999777677775 7888999988877777666554
Q ss_pred h
Q psy5048 279 R 279 (319)
Q Consensus 279 k 279 (319)
.
T Consensus 158 ~ 158 (186)
T 3as5_A 158 G 158 (186)
T ss_dssp T
T ss_pred C
Confidence 3
No 164
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=72.93 E-value=5.7 Score=31.99 Aligned_cols=65 Identities=12% Similarity=-0.243 Sum_probs=49.4
Q ss_pred HHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCC-ChhhHHHHHHHHHHH
Q psy5048 207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPP-EQSQCLPLLGIRAQH 277 (319)
Q Consensus 207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP-~n~~i~~el~~l~~~ 277 (319)
++.....+..++..+..+++..| +|..+++..|..+...++++ +++++| .+..+...+..+-..
T Consensus 122 ~~~~~~~~~~A~~~~~~~~~~~~-------~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (225)
T 2vq2_A 122 CSAKQGQFGLAEAYLKRSLAAQP-------QFPPAFKELARTKMLAGQLGDADYYFKKYQSRVEVLQADDLLLGWKIAKA 194 (225)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHST-------TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHhCC-------CCchHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHh
Confidence 44666788889999999988888 88999999998666666665 778888 877776666555444
Q ss_pred H
Q psy5048 278 Q 278 (319)
Q Consensus 278 ~ 278 (319)
.
T Consensus 195 ~ 195 (225)
T 2vq2_A 195 L 195 (225)
T ss_dssp T
T ss_pred c
Confidence 3
No 165
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=71.25 E-value=4.5 Score=38.64 Aligned_cols=61 Identities=15% Similarity=-0.100 Sum_probs=48.9
Q ss_pred HHHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHH
Q psy5048 206 SAYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGI 273 (319)
Q Consensus 206 ~~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~ 273 (319)
.++....++..|+.....+++.+| +|..+++..|..+...++++ +++++|++..+...|..
T Consensus 524 ~~~~~~g~~~~A~~~~~~~~~~~p-------~~~~~~~~l~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~l~~ 592 (597)
T 2xpi_A 524 HAYRKLKMYDAAIDALNQGLLLST-------NDANVHTAIALVYLHKKIPGLAITHLHESLAISPNEIMASDLLKR 592 (597)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHSS-------CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHhcCHHHHHHHHHHHHHhCC-------CChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHHHH
Confidence 355666888888999999888888 89999999999777677765 88899998887776654
No 166
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=71.20 E-value=6.4 Score=28.47 Aligned_cols=79 Identities=6% Similarity=-0.112 Sum_probs=54.0
Q ss_pred HHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCCh-------hhHHHHHH
Q psy5048 208 YALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQ-------SQCLPLLG 272 (319)
Q Consensus 208 ~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n-------~~i~~el~ 272 (319)
+.....+..|+.....++..+| ++..+++..|..+...++++ +++++|.+ ..+...+.
T Consensus 14 ~~~~~~~~~A~~~~~~a~~~~~-------~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~la 86 (131)
T 1elr_A 14 AYKKKDFDTALKHYDKAKELDP-------TNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKAYARIG 86 (131)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHH
T ss_pred HHHhcCHHHHHHHHHHHHhcCC-------ccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHHHHHHHH
Confidence 3556788899999999999888 99999999999776677775 67777765 55555555
Q ss_pred HHHHHHhHhHHHHHHHHHhccc
Q psy5048 273 IRAQHQRGHMITQGSLYFFLFY 294 (319)
Q Consensus 273 ~l~~~~k~~~~kek~~y~~mF~ 294 (319)
.+-.+.... .+-.+.|.....
T Consensus 87 ~~~~~~~~~-~~A~~~~~~~~~ 107 (131)
T 1elr_A 87 NSYFKEEKY-KDAIHFYNKSLA 107 (131)
T ss_dssp HHHHHTTCH-HHHHHHHHHHHH
T ss_pred HHHHHhccH-HHHHHHHHHHHH
Confidence 554443322 233344555444
No 167
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=69.36 E-value=11 Score=30.70 Aligned_cols=63 Identities=10% Similarity=-0.099 Sum_probs=37.9
Q ss_pred HHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHH
Q psy5048 209 ALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQ 278 (319)
Q Consensus 209 ~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~ 278 (319)
.....+..|+..+..++...| ++..+++..|..+...++++ +++++|.+..+...+..+-.+.
T Consensus 102 ~~~~~~~~A~~~~~~~~~~~~-------~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 172 (243)
T 2q7f_A 102 VVKEMYKEAKDMFEKALRAGM-------ENGDLFYMLGTVLVKLEQPKLALPYLQRAVELNENDTEARFQFGMCLANE 172 (243)
T ss_dssp HHTTCHHHHHHHHHHHHHHTC-------CSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHhccHHHHHHHHHHHHHhCC-------CCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHc
Confidence 334556666666666666666 66777777776555555554 5666676666655555544443
No 168
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=69.02 E-value=8 Score=34.73 Aligned_cols=63 Identities=11% Similarity=-0.011 Sum_probs=42.1
Q ss_pred HHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHH
Q psy5048 207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQ 276 (319)
Q Consensus 207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~ 276 (319)
++.....+..|+..+..++..+| +++.+++..|..+...++++ +++++|++..+...|..+-.
T Consensus 76 ~~~~~g~~~~A~~~~~~al~~~p-------~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~ 146 (388)
T 1w3b_A 76 VYKERGQLQEAIEHYRHALRLKP-------DFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLK 146 (388)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHHSCSSHHHHHHHHHHHHCTTCTHHHHHHHHHHH
T ss_pred HHHHCCCHHHHHHHHHHHHHcCc-------chHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Confidence 44555677777777777777777 77777777777555555554 66677777666665555443
No 169
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=68.72 E-value=7.8 Score=30.87 Aligned_cols=57 Identities=2% Similarity=-0.224 Sum_probs=43.4
Q ss_pred chhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCCh--hhHHHHHHHHHHHH
Q psy5048 215 TPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQ--SQCLPLLGIRAQHQ 278 (319)
Q Consensus 215 ~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n--~~i~~el~~l~~~~ 278 (319)
..++.....++..+| +|..++|..|..+...++++ +++++|+. ..+...|..+-...
T Consensus 91 ~~a~~~~~~al~~~P-------~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~~ 157 (176)
T 2r5s_A 91 SPELKRLEQELAANP-------DNFELACELAVQYNQVGRDEEALELLWNILKVNLGAQDGEVKKTFMDILSAL 157 (176)
T ss_dssp CHHHHHHHHHHHHST-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHhCC-------CCHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHHHh
Confidence 346888888888888 99999999999777777775 88899985 44666665554443
No 170
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=68.58 E-value=21 Score=32.37 Aligned_cols=62 Identities=10% Similarity=-0.019 Sum_probs=51.4
Q ss_pred HHHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChh---hHHHHHHHH
Q psy5048 206 SAYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQS---QCLPLLGIR 274 (319)
Q Consensus 206 ~~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~---~i~~el~~l 274 (319)
.++.....+..|+..+..+++.+| ++..+++..|..+...+.++ +++++|.+. .+...|..+
T Consensus 68 ~~~~~~g~~~~A~~~~~~al~~~p-------~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~ 140 (450)
T 2y4t_A 68 TVFLAMGKSKAALPDLTKVIQLKM-------DFTAARLQRGHLLLKQGKLDEAEDDFKKVLKSNPSENEEKEAQSQLIKS 140 (450)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHH
T ss_pred HHHHHCCCHHHHHHHHHHHHhcCC-------CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChhhHHHHHHHHHH
Confidence 355677889999999999999998 99999999999777777775 889999998 776665443
No 171
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=67.89 E-value=7.8 Score=33.99 Aligned_cols=40 Identities=10% Similarity=-0.323 Sum_probs=25.0
Q ss_pred HhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc
Q psy5048 210 LLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL 256 (319)
Q Consensus 210 ~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~ 256 (319)
....+..|+..+..++..+| +|..|++..|..+...+.++
T Consensus 129 ~~g~~~~A~~~~~~al~~~P-------~~~~a~~~la~~~~~~g~~~ 168 (287)
T 3qou_A 129 QESNYTDALPLLXDAWQLSN-------QNGEIGLLLAETLIALNRSE 168 (287)
T ss_dssp HTTCHHHHHHHHHHHHHHTT-------SCHHHHHHHHHHHHHTTCHH
T ss_pred hCCCHHHHHHHHHHHHHhCC-------cchhHHHHHHHHHHHCCCHH
Confidence 34556666666677777666 77777777766554444443
No 172
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=67.27 E-value=17 Score=29.97 Aligned_cols=78 Identities=8% Similarity=-0.048 Sum_probs=48.0
Q ss_pred HHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------ccc--CCCChhhHHHHHHHHHHHH
Q psy5048 209 ALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYE--FPPEQSQCLPLLGIRAQHQ 278 (319)
Q Consensus 209 ~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~--~dP~n~~i~~el~~l~~~~ 278 (319)
.....+..|+..+..++..+| ++..+++..|..+...++++ +++ .+|.+..+...+..+-...
T Consensus 82 ~~~~~~~~A~~~~~~a~~~~~-------~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~la~~~~~~ 154 (252)
T 2ho1_A 82 QTEMEPKLADEEYRKALASDS-------RNARVLNNYGGFLYEQKRYEEAYQRLLEASQDTLYPERSRVFENLGLVSLQM 154 (252)
T ss_dssp HHTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHT
T ss_pred HHcCCHHHHHHHHHHHHHHCc-------CcHHHHHHHHHHHHHHhHHHHHHHHHHHHHhCccCcccHHHHHHHHHHHHHc
Confidence 445677777788887777777 77888888888666566664 555 6676666666665554433
Q ss_pred hHhHHHHHHHHHhccc
Q psy5048 279 RGHMITQGSLYFFLFY 294 (319)
Q Consensus 279 k~~~~kek~~y~~mF~ 294 (319)
.. .++-...|..+..
T Consensus 155 g~-~~~A~~~~~~~~~ 169 (252)
T 2ho1_A 155 KK-PAQAKEYFEKSLR 169 (252)
T ss_dssp TC-HHHHHHHHHHHHH
T ss_pred CC-HHHHHHHHHHHHh
Confidence 32 2233334444443
No 173
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=66.86 E-value=8.7 Score=32.93 Aligned_cols=78 Identities=8% Similarity=-0.091 Sum_probs=51.4
Q ss_pred HHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHHhH
Q psy5048 209 ALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQRG 280 (319)
Q Consensus 209 ~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~k~ 280 (319)
.....+..|+..+..++..+| ++..+++.+|..+...++++ +++++|.+..+...+..+-.....
T Consensus 32 ~~~~~~~~A~~~~~~~~~~~~-------~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~ 104 (327)
T 3cv0_A 32 LKLANLAEAALAFEAVCQAAP-------EREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTNEHN 104 (327)
T ss_dssp HHTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred HHhccHHHHHHHHHHHHHhCC-------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcCCHHHHHHHHHHHHHcCC
Confidence 345667778888888888777 88888888888666666664 777888887777666665544333
Q ss_pred hHHHHHHHHHhccc
Q psy5048 281 HMITQGSLYFFLFY 294 (319)
Q Consensus 281 ~~~kek~~y~~mF~ 294 (319)
. .+-.+.|..+..
T Consensus 105 ~-~~A~~~~~~~~~ 117 (327)
T 3cv0_A 105 A-NAALASLRAWLL 117 (327)
T ss_dssp H-HHHHHHHHHHHH
T ss_pred H-HHHHHHHHHHHH
Confidence 2 233334444443
No 174
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=66.85 E-value=16 Score=30.40 Aligned_cols=56 Identities=5% Similarity=-0.197 Sum_probs=43.5
Q ss_pred HHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHH
Q psy5048 209 ALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCL 268 (319)
Q Consensus 209 ~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~ 268 (319)
.....+..|+.....++...| .++....|+|.+|..+...++++ +++++|++..+.
T Consensus 15 ~~~g~~~~A~~~~~~~~~~~p----~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~~ 78 (225)
T 2yhc_A 15 LQDGNWRQAITQLEALDNRYP----FGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNID 78 (225)
T ss_dssp HHHTCHHHHHHHHHHHHHHCT----TSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHH
T ss_pred HHcCCHHHHHHHHHHHHHhCC----CChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcHH
Confidence 456888999999999998777 11123589999999777778886 788999987653
No 175
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=65.88 E-value=12 Score=30.11 Aligned_cols=53 Identities=9% Similarity=-0.122 Sum_probs=43.5
Q ss_pred HHHHhcccchhHhHHhhhhccccccccCCCCCh----------------hHHHHHHHHHHhcCccc--------cccCCC
Q psy5048 207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTI----------------PAWTHDYTRLALLLPFL--------QYEFPP 262 (319)
Q Consensus 207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~Nv----------------KALfRrg~~~~~~~~~~--------a~~~dP 262 (319)
++..+.++..|+..+..+++..| .|. .++|.+|..+..+++++ +++++|
T Consensus 80 ~~~~~~~~~~A~~~~~~al~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p 152 (213)
T 1hh8_A 80 LYYQTEKYDLAIKDLKEALIQLR-------GNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKS 152 (213)
T ss_dssp HHHHTTCHHHHHHHHHHHHHTTT-------TCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCC
T ss_pred HHHHcccHHHHHHHHHHHHHhCC-------CccHHHHHHhccccCccchHHHHHHHHHHHHccCHHHHHHHHHHHHHcCc
Confidence 55667889999999999999776 555 99999999777777775 899999
Q ss_pred Chhh
Q psy5048 263 EQSQ 266 (319)
Q Consensus 263 ~n~~ 266 (319)
++..
T Consensus 153 ~~~~ 156 (213)
T 1hh8_A 153 EPRH 156 (213)
T ss_dssp SGGG
T ss_pred cccc
Confidence 8643
No 176
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=63.42 E-value=22 Score=33.02 Aligned_cols=75 Identities=5% Similarity=-0.073 Sum_probs=35.9
Q ss_pred hhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCc-cc--------cccCCCChhhHHHHHHHHHHHH-hHhHHHH
Q psy5048 216 PSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLP-FL--------QYEFPPEQSQCLPLLGIRAQHQ-RGHMITQ 285 (319)
Q Consensus 216 ~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~-~~--------a~~~dP~n~~i~~el~~l~~~~-k~~~~ke 285 (319)
.++..+..+|..+| +|.-|++-|+..+..++. ++ ++..+|.|-.+=.--+.+-++. .....+|
T Consensus 72 ~AL~lt~~~L~~nP-------~~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPKny~aW~hR~wlL~~l~~~~~~~E 144 (349)
T 3q7a_A 72 RALELTEIIVRMNP-------AHYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLKSYQVWHHRLLLLDRISPQDPVSE 144 (349)
T ss_dssp HHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHCCSCCHHH
T ss_pred HHHHHHHHHHHhCc-------hhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcCCChHHH
Confidence 35555556665555 666666555554433331 21 5556666544433333333333 1123455
Q ss_pred HHHHHhcccCCC
Q psy5048 286 GSLYFFLFYNMS 297 (319)
Q Consensus 286 k~~y~~mF~~~~ 297 (319)
-+.|.+|+..-+
T Consensus 145 L~~~~k~L~~dp 156 (349)
T 3q7a_A 145 IEYIHGSLLPDP 156 (349)
T ss_dssp HHHHHHHTSSCT
T ss_pred HHHHHHHHHhCC
Confidence 555555555443
No 177
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=63.35 E-value=17 Score=31.66 Aligned_cols=55 Identities=11% Similarity=-0.111 Sum_probs=37.3
Q ss_pred HHHHHHhcccchhHhHHhhhhccccccccCCCCCh--h-----HHHHHHHHHHhcCccc--------cccCCCChhh
Q psy5048 205 SSAYALLVKKTPSIHNCFLLSTKSMLTFARNQSTI--P-----AWTHDYTRLALLLPFL--------QYEFPPEQSQ 266 (319)
Q Consensus 205 ~~~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~Nv--K-----ALfRrg~~~~~~~~~~--------a~~~dP~n~~ 266 (319)
-.++..+.++..|+..+..+++..| +|. + ++++.|..+..++++. +++++|+...
T Consensus 165 g~~~~~~g~~~~A~~~~~~al~~~~-------~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~ 234 (292)
T 1qqe_A 165 ADLKALDGQYIEASDIYSKLIKSSM-------GNRLSQWSLKDYFLKKGLCQLAATDAVAAARTLQEGQSEDPNFAD 234 (292)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHTTS-------SCTTTGGGHHHHHHHHHHHHHHTTCHHHHHHHHHGGGCC------
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHHh-------cCCcccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCC
Confidence 3455677899999999999999776 332 2 7888898666667765 8999998654
No 178
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=61.10 E-value=19 Score=30.63 Aligned_cols=67 Identities=10% Similarity=-0.006 Sum_probs=52.8
Q ss_pred HHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHH
Q psy5048 207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQ 278 (319)
Q Consensus 207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~ 278 (319)
++.....+..|+..+..++..+| ++..+++..|..+...++++ +++++|.+..+...|..+-.+.
T Consensus 181 ~~~~~~~~~~A~~~~~~~~~~~~-------~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~ 253 (327)
T 3cv0_A 181 LYNLSNNYDSAAANLRRAVELRP-------DDAQLWNKLGATLANGNRPQEALDAYNRALDINPGYVRVMYNMAVSYSNM 253 (327)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHhccHHHHHHHHHHHHHhCC-------CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHh
Confidence 44566888889999999999888 99999999999776667765 7889999888877777665554
Q ss_pred hH
Q psy5048 279 RG 280 (319)
Q Consensus 279 k~ 280 (319)
..
T Consensus 254 g~ 255 (327)
T 3cv0_A 254 SQ 255 (327)
T ss_dssp TC
T ss_pred cc
Confidence 33
No 179
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=60.61 E-value=6.3 Score=37.53 Aligned_cols=61 Identities=7% Similarity=-0.131 Sum_probs=48.8
Q ss_pred cccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhc--------Cccc--------cccCCC---ChhhHHHHHH
Q psy5048 212 VKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALL--------LPFL--------QYEFPP---EQSQCLPLLG 272 (319)
Q Consensus 212 ~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~--------~~~~--------a~~~dP---~n~~i~~el~ 272 (319)
.++..|+..+..+++.+| +|..+++..|..+..+ +.++ |++++| .+..+...|.
T Consensus 193 g~~~~A~~~~~~al~~~p-------~~~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~lg 265 (474)
T 4abn_A 193 RHVMDSVRQAKLAVQMDV-------LDGRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEKVDRKASSNPDLHLNRA 265 (474)
T ss_dssp HHHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHCGGGGGCHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHhCC-------CCHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHhCCCcccCHHHHHHHH
Confidence 678889999999999999 9999999999966555 4554 888999 8877777776
Q ss_pred HHHHHHh
Q psy5048 273 IRAQHQR 279 (319)
Q Consensus 273 ~l~~~~k 279 (319)
.+-....
T Consensus 266 ~~~~~~g 272 (474)
T 4abn_A 266 TLHKYEE 272 (474)
T ss_dssp HHHHHTT
T ss_pred HHHHHcC
Confidence 6655443
No 180
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=59.99 E-value=20 Score=32.47 Aligned_cols=78 Identities=9% Similarity=-0.049 Sum_probs=47.6
Q ss_pred cchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcC--ccc--------cccCCCChhhHHHHHHHHH----HHHh
Q psy5048 214 KTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLL--PFL--------QYEFPPEQSQCLPLLGIRA----QHQR 279 (319)
Q Consensus 214 ~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~--~~~--------a~~~dP~n~~i~~el~~l~----~~~k 279 (319)
...++..+..+|..+| +|.-|++.|+..+..++ .++ ++.++|.+-.+=.--+.+- .+..
T Consensus 49 s~~aL~~t~~~L~~nP-------~~~taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~nPk~y~aW~~R~~iL~~~~~~l~ 121 (306)
T 3dra_A 49 SERALHITELGINELA-------SHYTIWIYRFNILKNLPNRNLYDELDWCEEIALDNEKNYQIWNYRQLIIGQIMELNN 121 (306)
T ss_dssp SHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHCc-------HHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHCcccHHHHHHHHHHHHHHHHhcc
Confidence 3457777888888777 88888888888666555 332 7778888655433333222 2210
Q ss_pred --HhHHHHHHHHHhcccCCCC
Q psy5048 280 --GHMITQGSLYFFLFYNMSS 298 (319)
Q Consensus 280 --~~~~kek~~y~~mF~~~~~ 298 (319)
....+|-+.|.+|+..-++
T Consensus 122 ~~~~~~~EL~~~~~~l~~~pk 142 (306)
T 3dra_A 122 NDFDPYREFDILEAMLSSDPK 142 (306)
T ss_dssp TCCCTHHHHHHHHHHHHHCTT
T ss_pred ccCCHHHHHHHHHHHHHhCCC
Confidence 2345666777777665443
No 181
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=59.45 E-value=22 Score=29.64 Aligned_cols=64 Identities=6% Similarity=-0.150 Sum_probs=49.4
Q ss_pred HHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHH-HHHHhcCccc--------cccCCCChhhHHHHHHHHHHH
Q psy5048 207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDY-TRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQH 277 (319)
Q Consensus 207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg-~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~ 277 (319)
++.....+..|+..+..+++.+| ++..+++.+| ..+.. .+++ +++++|++..+...+..+-..
T Consensus 117 ~~~~~~~~~~A~~~~~~al~~~~-------~~~~~~~~l~~~~~~~-~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~ 188 (272)
T 3u4t_A 117 YFYNKGNFPLAIQYMEKQIRPTT-------TDPKVFYELGQAYYYN-KEYVKADSSFVKVLELKPNIYIGYLWRARANAA 188 (272)
T ss_dssp HHHHTTCHHHHHHHHGGGCCSSC-------CCHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH
T ss_pred HHHHccCHHHHHHHHHHHhhcCC-------CcHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCccchHHHHHHHHHHHH
Confidence 55677889999999999999888 9999999999 44443 3554 888999987776666655544
Q ss_pred H
Q psy5048 278 Q 278 (319)
Q Consensus 278 ~ 278 (319)
.
T Consensus 189 ~ 189 (272)
T 3u4t_A 189 Q 189 (272)
T ss_dssp H
T ss_pred c
Confidence 4
No 182
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=59.02 E-value=23 Score=25.73 Aligned_cols=63 Identities=14% Similarity=0.061 Sum_probs=47.0
Q ss_pred CCCChhHHHHHHHHHHhcCcc---c--------cccCCCChhhHHHHHHHHHHHHhHhHHHHHHHHHhcccCCCC
Q psy5048 235 NQSTIPAWTHDYTRLALLLPF---L--------QYEFPPEQSQCLPLLGIRAQHQRGHMITQGSLYFFLFYNMSS 298 (319)
Q Consensus 235 ~~~NvKALfRrg~~~~~~~~~---~--------a~~~dP~n~~i~~el~~l~~~~k~~~~kek~~y~~mF~~~~~ 298 (319)
+++|.-+|+.+|+.+...++. . |+++||+|..+...|-.+.-+ ....++-...|..|+...+.
T Consensus 2 ~p~~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~-~g~y~~Ai~~w~~~l~~~p~ 75 (93)
T 3bee_A 2 NAVTATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFI-SFRFQEAIDTWVLLLDSNDP 75 (93)
T ss_dssp CCCCHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHTCCCT
T ss_pred CCCCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHH-cCCHHHHHHHHHHHHhhCCC
Confidence 458999999999955433321 1 999999999999999887765 44555667778888876654
No 183
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=57.94 E-value=28 Score=24.69 Aligned_cols=62 Identities=13% Similarity=-0.005 Sum_probs=46.1
Q ss_pred HHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHH
Q psy5048 208 YALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQ 276 (319)
Q Consensus 208 ~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~ 276 (319)
+.....+..++..+..++...| ++..+++..|..+...++++ +++.+|.+..+...+..+-.
T Consensus 45 ~~~~~~~~~A~~~~~~~~~~~~-------~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~ 114 (136)
T 2fo7_A 45 YYKQGDYDEAIEYYQKALELDP-------RSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYY 114 (136)
T ss_dssp HHHHTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHhcCHHHHHHHHHHHHHHCC-------CchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHH
Confidence 3455678888888888888777 88899999998776666665 67788887776666555443
No 184
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=57.30 E-value=23 Score=30.79 Aligned_cols=60 Identities=10% Similarity=-0.085 Sum_probs=40.3
Q ss_pred cccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCCh--hhHHHHHHHHHHHH
Q psy5048 212 VKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQ--SQCLPLLGIRAQHQ 278 (319)
Q Consensus 212 ~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n--~~i~~el~~l~~~~ 278 (319)
.....++......+..+| +|.-|+|..|..+...+.++ +++.+|++ ..++..|..+-...
T Consensus 199 ~~~~~a~~~l~~al~~~P-------~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~~~~~~ 268 (287)
T 3qou_A 199 AADTPEIQQLQQQVAENP-------EDAALATQLALQLHQVGRNEEALELLFGHLRXDLTAADGQTRXTFQEILAAL 268 (287)
T ss_dssp HTSCHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTGGGGHHHHHHHHHHHHH
T ss_pred cccCccHHHHHHHHhcCC-------ccHHHHHHHHHHHHHcccHHHHHHHHHHHHhcccccccchHHHHHHHHHHHc
Confidence 334445666666666666 88888888888776666665 77788886 55666555554443
No 185
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=56.81 E-value=27 Score=24.79 Aligned_cols=80 Identities=13% Similarity=-0.040 Sum_probs=53.4
Q ss_pred HHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHHh
Q psy5048 208 YALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQR 279 (319)
Q Consensus 208 ~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~k 279 (319)
+.....+..++.....++..+| ++..+++..|..+...++++ ++..+|.+..+...+..+-....
T Consensus 11 ~~~~~~~~~A~~~~~~~~~~~~-------~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 83 (136)
T 2fo7_A 11 YYKQGDYDEAIEYYQKALELDP-------RSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQG 83 (136)
T ss_dssp HHHHTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTT
T ss_pred HHHcCcHHHHHHHHHHHHHcCC-------cchhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHhc
Confidence 3455777888888888888777 89999999999665556664 77788988777666655443332
Q ss_pred HhHHHHHHHHHhcccC
Q psy5048 280 GHMITQGSLYFFLFYN 295 (319)
Q Consensus 280 ~~~~kek~~y~~mF~~ 295 (319)
...+-.+.|..+...
T Consensus 84 -~~~~A~~~~~~~~~~ 98 (136)
T 2fo7_A 84 -DYDEAIEYYQKALEL 98 (136)
T ss_dssp -CHHHHHHHHHHHHHH
T ss_pred -CHHHHHHHHHHHHHh
Confidence 233334445555443
No 186
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=54.39 E-value=25 Score=34.57 Aligned_cols=58 Identities=5% Similarity=-0.094 Sum_probs=44.4
Q ss_pred ccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcC-ccc--------cccCCCChhhHHHHHHHHHHH
Q psy5048 213 KKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLL-PFL--------QYEFPPEQSQCLPLLGIRAQH 277 (319)
Q Consensus 213 ~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~-~~~--------a~~~dP~n~~i~~el~~l~~~ 277 (319)
.|..+++.|.++++.|| .|--|++-|+-.+..++ .++ +++.+|+|-.+=.-...+-.+
T Consensus 124 ~~~~el~~~~k~l~~d~-------~N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~n~saW~~r~~ll~~ 190 (567)
T 1dce_A 124 NWARELELCARFLEADE-------RNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQ 190 (567)
T ss_dssp CHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCCHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhhcc-------ccccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCCCccHHHHHHHHHHh
Confidence 55789999999999999 99999999998665555 222 899999987665555554444
No 187
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=53.79 E-value=11 Score=34.16 Aligned_cols=77 Identities=8% Similarity=-0.125 Sum_probs=52.5
Q ss_pred HHhcccchhHhHHhhhhccccccccCCCCCh-----------------hHHHHHHHHHHhcCccc--------cccCCCC
Q psy5048 209 ALLVKKTPSIHNCFLLSTKSMLTFARNQSTI-----------------PAWTHDYTRLALLLPFL--------QYEFPPE 263 (319)
Q Consensus 209 ~~~~~~~~a~~~c~~vl~~~~l~~~~~~~Nv-----------------KALfRrg~~~~~~~~~~--------a~~~dP~ 263 (319)
....++..|+.....++...| +|. .+++.+|..+..+++|. |++++|.
T Consensus 190 ~~~g~~~~A~~~y~~Al~~~p-------~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~ 262 (338)
T 2if4_A 190 FKEEKLEEAMQQYEMAIAYMG-------DDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCNIVLTEEEK 262 (338)
T ss_dssp CSSSCCHHHHHHHHHHHHHSC-------HHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHHHHHHHHCTT
T ss_pred HhcCCHHHHHHHHHHHHHHhc-------cchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 344777888888888888776 554 48899999777778876 8999999
Q ss_pred hhhHHHHHHHHHHHHhHhHHHHHHHHHhcc
Q psy5048 264 QSQCLPLLGIRAQHQRGHMITQGSLYFFLF 293 (319)
Q Consensus 264 n~~i~~el~~l~~~~k~~~~kek~~y~~mF 293 (319)
|..+...+..+-.....+ .+-...|....
T Consensus 263 ~~~a~~~lg~a~~~~g~~-~~A~~~l~~al 291 (338)
T 2if4_A 263 NPKALFRRGKAKAELGQM-DSARDDFRKAQ 291 (338)
T ss_dssp CHHHHHHHHHHHHTTTCH-HHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHcCCH-HHHHHHHHHHH
Confidence 987776666554444333 22333444443
No 188
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=52.15 E-value=11 Score=29.83 Aligned_cols=57 Identities=12% Similarity=-0.081 Sum_probs=42.5
Q ss_pred hHhHHhhhhccc-cccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHHh
Q psy5048 217 SIHNCFLLSTKS-MLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQR 279 (319)
Q Consensus 217 a~~~c~~vl~~~-~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~k 279 (319)
.|..+..++..+ | ..+-..||=.|..+.-+++|. .|+++|+|+.+......++.+++
T Consensus 57 GI~lLe~l~~~~~p------~~~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~~eP~n~QA~~Lk~~i~~~i~ 122 (126)
T 1nzn_A 57 GIVLLEELLPKGSK------EEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELERLIDKAMK 122 (126)
T ss_dssp HHHHHHHHTTTSCH------HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCc------chHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHH
Confidence 455555555543 2 157778888888777788886 89999999999988888877664
No 189
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=50.21 E-value=36 Score=33.39 Aligned_cols=74 Identities=11% Similarity=-0.054 Sum_probs=51.4
Q ss_pred cchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCcc--c--------cccCCCChhhHHHHHHHHHHHHhHhHH
Q psy5048 214 KTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPF--L--------QYEFPPEQSQCLPLLGIRAQHQRGHMI 283 (319)
Q Consensus 214 ~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~--~--------a~~~dP~n~~i~~el~~l~~~~k~~~~ 283 (319)
+..+++.+..++..+| .|.-|++.|+-.+..++.+ + ++++||.|-.+=.--.-+-.+.....+
T Consensus 89 ~~~eL~~~~~~l~~~p-------K~y~aW~hR~w~l~~l~~~~~~~el~~~~k~l~~d~~N~~aW~~R~~~l~~l~~~~~ 161 (567)
T 1dce_A 89 VKAELGFLESCLRVNP-------KSYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPA 161 (567)
T ss_dssp HHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTCCCHH
T ss_pred HHHHHHHHHHHHHhCC-------CCHHHHHHHHHHHHHcccccHHHHHHHHHHHHhhccccccHHHHHHHHHHHcCCChH
Confidence 7789999999999999 9999999999977777633 3 999999986554443333333332334
Q ss_pred HHHHHHHhccc
Q psy5048 284 TQGSLYFFLFY 294 (319)
Q Consensus 284 kek~~y~~mF~ 294 (319)
+|-+.|.++-.
T Consensus 162 ~el~~~~~~I~ 172 (567)
T 1dce_A 162 EELAFTDSLIT 172 (567)
T ss_dssp HHHHHHHTTTT
T ss_pred HHHHHHHHHHH
Confidence 45444444443
No 190
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=42.68 E-value=1e+02 Score=28.42 Aligned_cols=48 Identities=8% Similarity=0.118 Sum_probs=37.6
Q ss_pred ccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhc-C-ccc--------cccCCCChhhH
Q psy5048 213 KKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALL-L-PFL--------QYEFPPEQSQC 267 (319)
Q Consensus 213 ~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~-~-~~~--------a~~~dP~n~~i 267 (319)
.+..++..|..+|..+| .|.-|++-|+..+..+ + .++ ++++||.|-.+
T Consensus 104 ~l~eEL~~~~~~L~~nP-------Kny~aW~hR~wlL~~l~~~~~~~EL~~~~k~L~~dpkNy~A 161 (349)
T 3q7a_A 104 SLEDELRLMNEFAVQNL-------KSYQVWHHRLLLLDRISPQDPVSEIEYIHGSLLPDPKNYHT 161 (349)
T ss_dssp CHHHHHHHHHHHHHTTC-------CCHHHHHHHHHHHHHHCCSCCHHHHHHHHHHTSSCTTCHHH
T ss_pred hHHHHHHHHHHHHHhCC-------CcHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhCCCCHHH
Confidence 47788999999999888 9999999998855444 3 332 89999998554
No 191
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=42.45 E-value=33 Score=22.96 Aligned_cols=37 Identities=11% Similarity=-0.175 Sum_probs=31.8
Q ss_pred HHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHH
Q psy5048 207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLA 250 (319)
Q Consensus 207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~ 250 (319)
++.....+..|+..+..++..+| +|..+++..|..+.
T Consensus 52 ~~~~~~~~~~A~~~~~~a~~~~p-------~~~~~~~~l~~~~~ 88 (91)
T 1na3_A 52 AYYKQGDYDEAIEYYQKALELDP-------NNAEAKQNLGNAKQ 88 (91)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHH
T ss_pred HHHHHhhHHHHHHHHHHHHhcCC-------CCHHHHHHHHHHHH
Confidence 45667889999999999999998 99999999998544
No 192
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=42.29 E-value=66 Score=31.00 Aligned_cols=93 Identities=14% Similarity=0.003 Sum_probs=58.1
Q ss_pred cCCcchhHHHHHHHhhHHHHHHhcccchhHhHHhhhhccccccc-cCCCCChhHHHHHHHHHHhcCccc--------cc-
Q psy5048 189 SFKPHRAESEKLYAHCSSAYALLVKKTPSIHNCFLLSTKSMLTF-ARNQSTIPAWTHDYTRLALLLPFL--------QY- 258 (319)
Q Consensus 189 ~~k~~~~~~~~l~~~~~~~~~~~~~~~~a~~~c~~vl~~~~l~~-~~~~~NvKALfRrg~~~~~~~~~~--------a~- 258 (319)
.+.+..........++-.++..+.+|..|+..+.++|+...-.+ ...++-..+|+.-|..+..++.++ |+
T Consensus 342 ~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~ 421 (490)
T 3n71_A 342 VFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYA 421 (490)
T ss_dssp TBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 34333334444555555577788999999999999988221111 012266778888888666667775 33
Q ss_pred ----cCCCChhhHHHHHHHHHHHHhHh
Q psy5048 259 ----EFPPEQSQCLPLLGIRAQHQRGH 281 (319)
Q Consensus 259 ----~~dP~n~~i~~el~~l~~~~k~~ 281 (319)
.+-|+++++...+..|.+.+.+.
T Consensus 422 i~~~~lG~~Hp~~~~~~~~l~~~~~e~ 448 (490)
T 3n71_A 422 ILLVTHGPSHPITKDLEAMRMQTEMEL 448 (490)
T ss_dssp HHHHHTCTTSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCChHHHHHHHHHHHHHHHH
Confidence 26788777777666666665433
No 193
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=41.41 E-value=27 Score=28.02 Aligned_cols=45 Identities=13% Similarity=0.062 Sum_probs=29.8
Q ss_pred HHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHHhHhHHHHHHHH
Q psy5048 241 AWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQRGHMITQGSLY 289 (319)
Q Consensus 241 ALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~k~~~~kek~~y 289 (319)
-||=.|..+.-+++|. .|+++|+|+.+......++.+++ ||-.+|
T Consensus 80 ~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA~~Lk~~Ie~ki~----kd~~~~ 132 (134)
T 3o48_A 80 CLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKSMVEDKIQ----KEENLY 132 (134)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHHH----HHHHHT
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHH----hhcccc
Confidence 3455555444456775 89999999998877666666554 454444
No 194
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=41.02 E-value=35 Score=31.20 Aligned_cols=55 Identities=7% Similarity=-0.144 Sum_probs=40.0
Q ss_pred ccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHH
Q psy5048 213 KKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIR 274 (319)
Q Consensus 213 ~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l 274 (319)
.+..++.....++..+| ++..+++..|..+...+.+. |++++|++..+...|..+
T Consensus 228 ~~~~a~~~~~~al~~~~-------~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~ 290 (472)
T 4g1t_A 228 EEGEGEKLVEEALEKAP-------GVTDVLRSAAKFYRRKDEPDKAIELLKKALEYIPNNAYLHCQIGCC 290 (472)
T ss_dssp --CHHHHHHHHHHHHCS-------SCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCc-------cHHHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCChHHHHHHHHHH
Confidence 34456666666666676 89999998888776666665 888999998887776554
No 195
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=38.74 E-value=31 Score=27.96 Aligned_cols=39 Identities=10% Similarity=-0.063 Sum_probs=28.5
Q ss_pred hHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHH
Q psy5048 240 PAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQ 278 (319)
Q Consensus 240 KALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~ 278 (319)
--||=.|..+.-+++|. .|+++|+|+.+..+...++.++
T Consensus 78 dcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA~~Lk~~Ie~~i 124 (144)
T 1y8m_A 78 ECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKSMVEDKI 124 (144)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHH
Confidence 34555566555567775 8999999999988777777665
No 196
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=38.40 E-value=30 Score=31.24 Aligned_cols=60 Identities=10% Similarity=0.020 Sum_probs=32.8
Q ss_pred hcccc--hhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCc------cc--------cccCCCChhhHHHHHHHH
Q psy5048 211 LVKKT--PSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLP------FL--------QYEFPPEQSQCLPLLGIR 274 (319)
Q Consensus 211 ~~~~~--~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~------~~--------a~~~dP~n~~i~~el~~l 274 (319)
+..+. .++..|..+++.++ .|--|++-|+..+..++. ++ +++++|+|..+=.-++-|
T Consensus 157 l~~~~~~~EL~~~~~~i~~d~-------~N~sAW~~R~~ll~~l~~~~~~~~~~eEl~~~~~aI~~~p~n~SaW~y~~~l 229 (306)
T 3dra_A 157 FDLHNDAKELSFVDKVIDTDL-------KNNSAWSHRFFLLFSKKHLATDNTIDEELNYVKDKIVKCPQNPSTWNYLLGI 229 (306)
T ss_dssp TTCTTCHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHSSGGGCCHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred hcccChHHHHHHHHHHHHhCC-------CCHHHHHHHHHHHHhccccchhhhHHHHHHHHHHHHHhCCCCccHHHHHHHH
Confidence 34455 56666666666666 666666666664433322 11 556666665555444444
Q ss_pred HHH
Q psy5048 275 AQH 277 (319)
Q Consensus 275 ~~~ 277 (319)
-.+
T Consensus 230 l~~ 232 (306)
T 3dra_A 230 HER 232 (306)
T ss_dssp HHH
T ss_pred HHh
Confidence 443
No 197
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=36.45 E-value=1.2e+02 Score=28.59 Aligned_cols=89 Identities=9% Similarity=-0.155 Sum_probs=59.5
Q ss_pred chhHHHHHHHhhHHHHHHhcccchhHhHHhhhhccccccc-cCCCCChhHHHHHHHHHHhcCccc--------c-----c
Q psy5048 193 HRAESEKLYAHCSSAYALLVKKTPSIHNCFLLSTKSMLTF-ARNQSTIPAWTHDYTRLALLLPFL--------Q-----Y 258 (319)
Q Consensus 193 ~~~~~~~l~~~~~~~~~~~~~~~~a~~~c~~vl~~~~l~~-~~~~~NvKALfRrg~~~~~~~~~~--------a-----~ 258 (319)
..........++-.++..+.+|..|+..|.++|+...-.+ ...++-...|+.-|..+..++.++ | .
T Consensus 324 ~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~~ 403 (429)
T 3qwp_A 324 INIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRV 403 (429)
T ss_dssp TSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH
Confidence 3344445555555577778999999999999998221111 122267788888898776667775 2 2
Q ss_pred cCCCChhhHHHHHHHHHHHHhHh
Q psy5048 259 EFPPEQSQCLPLLGIRAQHQRGH 281 (319)
Q Consensus 259 ~~dP~n~~i~~el~~l~~~~k~~ 281 (319)
.+-|+++.+...+..|++...+-
T Consensus 404 ~lG~~Hp~~~~~~~~l~~~~~e~ 426 (429)
T 3qwp_A 404 THGREHSLIEDLILLLEECDANI 426 (429)
T ss_dssp HTCTTSHHHHHHHHHHHHHHHHH
T ss_pred hcCCCChHHHHHHHHHHHHHHHH
Confidence 36788888888877777776554
No 198
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=36.44 E-value=56 Score=29.90 Aligned_cols=57 Identities=5% Similarity=-0.104 Sum_probs=41.6
Q ss_pred cchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCcc-c--------cccCCCChhhHHHHHHHHHHH
Q psy5048 214 KTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPF-L--------QYEFPPEQSQCLPLLGIRAQH 277 (319)
Q Consensus 214 ~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~-~--------a~~~dP~n~~i~~el~~l~~~ 277 (319)
+..++..|.++++.|| .|--|++-|+-.+..++.. + +++.+|+|-.+=.-...+-.+
T Consensus 126 ~~~EL~~~~k~l~~dp-------rNy~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~N~SAW~~R~~ll~~ 191 (331)
T 3dss_A 126 WARELELCARFLEADE-------RNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQ 191 (331)
T ss_dssp HHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCC-------CCHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
Confidence 6778999999999998 9999999998855544432 1 888999986655444444333
No 199
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=36.11 E-value=69 Score=27.71 Aligned_cols=72 Identities=3% Similarity=-0.165 Sum_probs=51.7
Q ss_pred chhHhHHhhhhc-cccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhh-HHHHHHHHHHHHhHhHHH
Q psy5048 215 TPSIHNCFLLST-KSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQ-CLPLLGIRAQHQRGHMIT 284 (319)
Q Consensus 215 ~~a~~~c~~vl~-~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~-i~~el~~l~~~~k~~~~k 284 (319)
..++.....++. .+| +|..+++..|..+...++++ +++++|.+.+ +...+..+-.+... ..+
T Consensus 81 ~~A~~~~~rAl~~~~p-------~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~-~~~ 152 (308)
T 2ond_A 81 DEAANIYERAISTLLK-------KNMLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEG-IKS 152 (308)
T ss_dssp HHHHHHHHHHHTTTTT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHHHHC-HHH
T ss_pred HHHHHHHHHHHHHhCc-------ccHHHHHHHHHHHHhcCCHHHHHHHHHHHHhccccCccHHHHHHHHHHHHhcC-HHH
Confidence 678888888888 588 99999999999776666665 8899999876 66666666544333 333
Q ss_pred HHHHHHhccc
Q psy5048 285 QGSLYFFLFY 294 (319)
Q Consensus 285 ek~~y~~mF~ 294 (319)
-++.|.....
T Consensus 153 A~~~~~~a~~ 162 (308)
T 2ond_A 153 GRMIFKKARE 162 (308)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHh
Confidence 4556665554
No 200
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=35.77 E-value=38 Score=24.58 Aligned_cols=67 Identities=6% Similarity=-0.237 Sum_probs=38.8
Q ss_pred cccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHH
Q psy5048 212 VKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQ 278 (319)
Q Consensus 212 ~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~ 278 (319)
..+..|+..-..++...+-.-.....++-.++.-|..+..++++. |++++|++..+..-+..++...
T Consensus 19 ~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~n~~~~~~~~ 93 (104)
T 2v5f_A 19 ADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRANGNLKYFEYIM 93 (104)
T ss_dssp TCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHhhHHHHHHHH
Confidence 445555555555554221000011245666666677665566664 8999999998877776655543
No 201
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=34.17 E-value=45 Score=29.88 Aligned_cols=45 Identities=9% Similarity=-0.299 Sum_probs=23.5
Q ss_pred HHHHhcccchhHhHHhhhhccccccccCCCC-ChhHHHHHHHHHHhcCccc
Q psy5048 207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQS-TIPAWTHDYTRLALLLPFL 256 (319)
Q Consensus 207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~-NvKALfRrg~~~~~~~~~~ 256 (319)
++..+..+..|+.....++.-. .++. ...|+|++|..+..++..+
T Consensus 180 al~~LG~~~eAl~~l~~a~~g~-----~~P~~~~da~~~~glaL~~lGr~d 225 (282)
T 4f3v_A 180 AAANLALFTEAERRLTEANDSP-----AGEACARAIAWYLAMARRSQGNES 225 (282)
T ss_dssp HHHHTTCHHHHHHHHHHHHTST-----TTTTTHHHHHHHHHHHHHHHTCHH
T ss_pred HHHHCCCHHHHHHHHHHHhcCC-----CCccccHHHHHHHHHHHHHcCCHH
Confidence 4455566666666666665321 0012 5556666666555544443
No 202
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=30.68 E-value=99 Score=26.52 Aligned_cols=53 Identities=8% Similarity=-0.160 Sum_probs=40.5
Q ss_pred HHHHh-cccchhHhHHhhhhccccccccCCCCC------hhHHHHHHHHHHhcCccc--------cccCCCChhh
Q psy5048 207 AYALL-VKKTPSIHNCFLLSTKSMLTFARNQST------IPAWTHDYTRLALLLPFL--------QYEFPPEQSQ 266 (319)
Q Consensus 207 ~~~~~-~~~~~a~~~c~~vl~~~~l~~~~~~~N------vKALfRrg~~~~~~~~~~--------a~~~dP~n~~ 266 (319)
++... ..+..|+.++.++++..| .+ ..++++.|..+..++.+. +++++|.+..
T Consensus 126 ~~~~~lg~~~~A~~~~~~Al~~~~-------~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~ 193 (292)
T 1qqe_A 126 ILENDLHDYAKAIDCYELAGEWYA-------QDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRL 193 (292)
T ss_dssp HHHHTTCCHHHHHHHHHHHHHHHH-------HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTT
T ss_pred HHHHhhcCHHHHHHHHHHHHHHHH-------hCCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCc
Confidence 44553 888999999999999765 32 567888899777777776 8888888654
No 203
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=29.51 E-value=92 Score=28.42 Aligned_cols=26 Identities=4% Similarity=-0.023 Sum_probs=17.5
Q ss_pred hhHhHHhhhhccccccccCCCCChhHHHHHHHH
Q psy5048 216 PSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTR 248 (319)
Q Consensus 216 ~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~ 248 (319)
.++..+..+|..+| +|.-|++-|+..
T Consensus 48 eaL~~t~~~L~~nP-------~~ytaWn~Rr~i 73 (331)
T 3dss_A 48 SVLELTSQILGANP-------DFATLWNCRREV 73 (331)
T ss_dssp HHHHHHHHHHTTCT-------TCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCc-------hhHHHHHHHHHH
Confidence 36777777777666 777777666663
No 204
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=28.92 E-value=83 Score=27.29 Aligned_cols=52 Identities=8% Similarity=-0.124 Sum_probs=37.9
Q ss_pred HHHHHhcccchhHhHHhhhhccccccccCCCCC------hhHHHHHHHHHHhcCccc--------cccCCCChh
Q psy5048 206 SAYALLVKKTPSIHNCFLLSTKSMLTFARNQST------IPAWTHDYTRLALLLPFL--------QYEFPPEQS 265 (319)
Q Consensus 206 ~~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~N------vKALfRrg~~~~~~~~~~--------a~~~dP~n~ 265 (319)
.++..+.++..|+..+..++...+ ++ ..+++..|..+..++++. ++ ++|...
T Consensus 163 ~~~~~~g~~~~A~~~~~~al~~~~-------~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al-~~p~~~ 228 (307)
T 2ifu_A 163 RLLVRQQKFDEAAASLQKEKSMYK-------EMENYPTCYKKCIAQVLVQLHRADYVAAQKCVRESY-SIPGFS 228 (307)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHH-------HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHT-TSTTST
T ss_pred HHHHHcCCHHHHHHHHHHHHHHHH-------HcCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHh-CCCCCC
Confidence 355677899999999999998655 22 347888888665556664 88 999743
No 205
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=28.24 E-value=67 Score=26.24 Aligned_cols=74 Identities=9% Similarity=-0.138 Sum_probs=47.7
Q ss_pred HHHHHhcccchhHhHHhhhhccccccc-cCCCCChhHHHHHHHHHHhcCccc--------cccC--------CCChhhHH
Q psy5048 206 SAYALLVKKTPSIHNCFLLSTKSMLTF-ARNQSTIPAWTHDYTRLALLLPFL--------QYEF--------PPEQSQCL 268 (319)
Q Consensus 206 ~~~~~~~~~~~a~~~c~~vl~~~~l~~-~~~~~NvKALfRrg~~~~~~~~~~--------a~~~--------dP~n~~i~ 268 (319)
.++.....+..|+..+.+++....-.. ..++.+..+++..|..+..+++++ ++++ +|.+..+.
T Consensus 93 ~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~ 172 (283)
T 3edt_B 93 VLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTK 172 (283)
T ss_dssp HHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHH
T ss_pred HHHHHhccHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHH
Confidence 355666888889999998887510000 001278999999999777777775 5555 56566666
Q ss_pred HHHHHHHHHHh
Q psy5048 269 PLLGIRAQHQR 279 (319)
Q Consensus 269 ~el~~l~~~~k 279 (319)
..|..+-....
T Consensus 173 ~~la~~~~~~g 183 (283)
T 3edt_B 173 NNLASCYLKQG 183 (283)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHcC
Confidence 65555544433
No 206
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=27.47 E-value=1.4e+02 Score=25.56 Aligned_cols=52 Identities=6% Similarity=-0.215 Sum_probs=27.5
Q ss_pred HHhcccchhHhHHhhhhccccccccCCCCChh-HHHHHHHHHHhcCccc--------cccCCCChhhH
Q psy5048 209 ALLVKKTPSIHNCFLLSTKSMLTFARNQSTIP-AWTHDYTRLALLLPFL--------QYEFPPEQSQC 267 (319)
Q Consensus 209 ~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvK-ALfRrg~~~~~~~~~~--------a~~~dP~n~~i 267 (319)
.....+..+......++..+| +|.. +++..|..+...+.++ |++++|.+..+
T Consensus 110 ~~~~~~~~A~~~~~~al~~~p-------~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~ 170 (308)
T 2ond_A 110 ESRMKYEKVHSIYNRLLAIED-------IDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHV 170 (308)
T ss_dssp HHTTCHHHHHHHHHHHHTSSS-------SCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCCTHH
T ss_pred HhcCCHHHHHHHHHHHHhccc-------cCccHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHH
Confidence 344555666666666666665 5554 6666555333333332 55555554443
No 207
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=27.39 E-value=1.4e+02 Score=28.00 Aligned_cols=60 Identities=17% Similarity=0.020 Sum_probs=35.1
Q ss_pred HHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHH
Q psy5048 207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGI 273 (319)
Q Consensus 207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~ 273 (319)
++.....+..|+.....+++.+| +|+.+++..|..+...+.++ +++++|.+..+...|..
T Consensus 382 ~~~~~g~~~~A~~~~~~~~~~~~-------~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~ 449 (597)
T 2xpi_A 382 YYLCVNKISEARRYFSKSSTMDP-------QFGPAWIGFAHSFAIEGEHDQAISAYTTAARLFQGTHLPYLFLGM 449 (597)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTTTCSHHHHHHHH
T ss_pred HHHHhccHHHHHHHHHHHHHhCC-------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHH
Confidence 33444666666666666666666 67777777766544444443 55666665555444433
No 208
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=24.15 E-value=2.2e+02 Score=25.55 Aligned_cols=52 Identities=10% Similarity=-0.131 Sum_probs=28.0
Q ss_pred ccchhHhHHhhhhccccccccCCCCChhHHHHHHHHH---HhcCccc--------cccCCCChhhHHHHH
Q psy5048 213 KKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRL---ALLLPFL--------QYEFPPEQSQCLPLL 271 (319)
Q Consensus 213 ~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~---~~~~~~~--------a~~~dP~n~~i~~el 271 (319)
.+..|+....++++.+| +|.-+++..|..+ ..+.+++ |++++|.+..+...|
T Consensus 153 ~y~~A~~~~~kal~~~p-------~~~~~~~~~~~~~~~l~~~~~~~~al~~~~~al~l~p~~~~~~~~l 215 (472)
T 4g1t_A 153 QNERAKVCFEKALEKKP-------KNPEFTSGLAIASYRLDNWPPSQNAIDPLRQAIRLNPDNQYLKVLL 215 (472)
T ss_dssp HHHHHHHHHHHHHHHST-------TCHHHHHHHHHHHHHHHHSCCCCCTHHHHHHHHHHCSSCHHHHHHH
T ss_pred cHHHHHHHHHHHHHhCC-------CCHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhhcCCcchHHHHHH
Confidence 45566666666666666 6666666665521 2222221 556666665555444
No 209
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=23.65 E-value=74 Score=28.20 Aligned_cols=90 Identities=10% Similarity=-0.057 Sum_probs=52.3
Q ss_pred hhhhhhhcCCcccccchHHHHHHHHhhhhhcccCCcc-hhHHHHHHHhhHHHHHHhcccchhHhHHhhhhcc------cc
Q psy5048 157 WDRRFTQKGPMAKNREHIAHRARRDRGKRRIQSFKPH-RAESEKLYAHCSSAYALLVKKTPSIHNCFLLSTK------SM 229 (319)
Q Consensus 157 ~a~~~ke~Gn~~~~~~~~~~~~~~~~~k~~~~~~k~~-~~~~~~l~~~~~~~~~~~~~~~~a~~~c~~vl~~------~~ 229 (319)
.+..+...|..+...+.+..+...- .+.... .+. ......+...+-.++.....+..++..+..++.. ++
T Consensus 47 ~~~~l~~~g~~~~~~g~~~~A~~~~-~~al~~--~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 123 (411)
T 4a1s_A 47 MCLELALEGERLCNAGDCRAGVAFF-QAAIQA--GTEDLRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMNDRL 123 (411)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHH-HHHHHH--CCSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHhCcHHHHHHHH-HHHHHh--cccChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccCch
Confidence 3445556666666666665333211 111111 111 1222233333334556778888899998888875 45
Q ss_pred ccccCCCCChhHHHHHHHHHHhcCccc
Q psy5048 230 LTFARNQSTIPAWTHDYTRLALLLPFL 256 (319)
Q Consensus 230 l~~~~~~~NvKALfRrg~~~~~~~~~~ 256 (319)
.+..+++..|..+...+++.
T Consensus 124 -------~~~~~~~~l~~~~~~~g~~~ 143 (411)
T 4a1s_A 124 -------GEAKSSGNLGNTLKVMGRFD 143 (411)
T ss_dssp -------HHHHHHHHHHHHHHHTTCHH
T ss_pred -------HHHHHHHHHHHHHHHCCCHH
Confidence 78899999999777677775
No 210
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=21.52 E-value=80 Score=22.73 Aligned_cols=41 Identities=10% Similarity=-0.245 Sum_probs=33.0
Q ss_pred HHHHhhHHHHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHH
Q psy5048 199 KLYAHCSSAYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDY 246 (319)
Q Consensus 199 ~l~~~~~~~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg 246 (319)
.+...+..++-.+..+..|+..-..++..+| +|..|++-++
T Consensus 47 ~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P-------~~~~~~~n~~ 87 (104)
T 2v5f_A 47 SVLDYLSYAVYQQGDLDKALLLTKKLLELDP-------EHQRANGNLK 87 (104)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHhcCC-------CCHHHHhhHH
Confidence 4444555677888999999999999999999 9988877665
No 211
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=20.75 E-value=1.9e+02 Score=27.19 Aligned_cols=62 Identities=3% Similarity=-0.118 Sum_probs=40.0
Q ss_pred hHHHHHHHhhHHHHHHhcccchhHhHHhhhhccccccc-cCCCCChhHHHHHHHHHHhcCccc
Q psy5048 195 AESEKLYAHCSSAYALLVKKTPSIHNCFLLSTKSMLTF-ARNQSTIPAWTHDYTRLALLLPFL 256 (319)
Q Consensus 195 ~~~~~l~~~~~~~~~~~~~~~~a~~~c~~vl~~~~l~~-~~~~~NvKALfRrg~~~~~~~~~~ 256 (319)
........++-.++..+.+|..|+..+.++|+...-.+ ...++-..+|+.-|..+..++.++
T Consensus 337 p~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~qg~~~ 399 (433)
T 3qww_A 337 VYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLGRLYMGLENKA 399 (433)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHH
T ss_pred hHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHhccCHH
Confidence 33444444455567778999999999999988211001 012267788888888776667765
Done!