Query psy5049
Match_columns 153
No_of_seqs 107 out of 1085
Neff 5.8
Searched_HMMs 29240
Date Sat Aug 17 00:25:48 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5049.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/5049hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2w8t_A SPT, serine palmitoyltr 98.7 9.8E-08 3.3E-12 80.2 9.8 89 46-135 314-413 (427)
2 3kki_A CAI-1 autoinducer synth 98.4 2E-06 6.7E-11 71.3 10.7 88 46-136 306-403 (409)
3 3tqx_A 2-amino-3-ketobutyrate 98.2 7.9E-06 2.7E-10 66.5 10.7 89 46-136 297-395 (399)
4 3ke3_A Putative serine-pyruvat 98.2 4.4E-06 1.5E-10 69.0 7.8 89 46-135 273-374 (379)
5 2bwn_A 5-aminolevulinate synth 98.1 1.3E-05 4.6E-10 65.8 9.9 87 47-135 301-398 (401)
6 3hbx_A GAD 1, glutamate decarb 98.1 1.8E-05 6.1E-10 68.7 10.1 89 45-134 339-441 (502)
7 3k40_A Aromatic-L-amino-acid d 98.0 1.3E-05 4.5E-10 69.0 8.6 90 45-135 370-469 (475)
8 4e1o_A HDC, histidine decarbox 98.0 2.5E-05 8.4E-10 67.3 8.8 89 46-135 378-476 (481)
9 1fc4_A 2-amino-3-ketobutyrate 97.9 0.00014 4.9E-09 59.5 11.1 89 46-136 298-396 (401)
10 3a2b_A Serine palmitoyltransfe 97.8 0.00017 5.9E-09 59.0 10.7 89 46-136 293-391 (398)
11 1bs0_A Protein (8-amino-7-oxon 97.7 0.00013 4.5E-09 59.3 7.9 85 47-133 289-383 (384)
12 2a7v_A Serine hydroxymethyltra 97.5 0.00059 2E-08 59.8 10.1 86 46-135 333-439 (490)
13 2c0r_A PSAT, phosphoserine ami 97.5 0.00092 3.1E-08 53.9 10.2 87 47-135 262-359 (362)
14 1m32_A 2-aminoethylphosphonate 97.4 0.00094 3.2E-08 53.1 9.5 88 47-135 265-363 (366)
15 2qma_A Diaminobutyrate-pyruvat 97.4 0.00056 1.9E-08 58.6 8.8 89 46-135 392-494 (497)
16 1iug_A Putative aspartate amin 97.4 0.00076 2.6E-08 53.6 8.8 90 46-136 250-347 (352)
17 3vp6_A Glutamate decarboxylase 97.4 0.00041 1.4E-08 60.3 7.4 89 46-135 387-503 (511)
18 2dgk_A GAD-beta, GADB, glutama 97.3 0.001 3.4E-08 56.1 9.1 88 46-134 325-431 (452)
19 2dr1_A PH1308 protein, 386AA l 97.3 0.0015 5E-08 52.6 9.7 88 47-135 280-377 (386)
20 3f9t_A TDC, L-tyrosine decarbo 97.3 0.0025 8.6E-08 51.0 10.5 86 45-133 306-394 (397)
21 3ffr_A Phosphoserine aminotran 97.2 0.0012 4.3E-08 52.4 8.2 87 46-133 264-360 (362)
22 3hdo_A Histidinol-phosphate am 97.1 0.0038 1.3E-07 50.4 10.4 85 47-136 264-354 (360)
23 3frk_A QDTB; aminotransferase, 97.1 0.00016 5.5E-09 58.8 2.1 115 4-135 250-366 (373)
24 2fyf_A PSAT, phosphoserine ami 97.1 0.0033 1.1E-07 51.6 9.9 88 46-134 296-395 (398)
25 3isl_A Purine catabolism prote 97.1 0.0029 9.9E-08 51.5 9.1 92 46-138 288-391 (416)
26 2yrr_A Aminotransferase, class 97.0 0.0025 8.5E-08 50.4 8.1 89 46-135 253-351 (353)
27 3qgu_A LL-diaminopimelate amin 97.0 0.0021 7.1E-08 53.6 7.8 89 46-137 343-440 (449)
28 3zrp_A Serine-pyruvate aminotr 97.0 0.0079 2.7E-07 48.1 10.8 89 46-136 264-362 (384)
29 3piu_A 1-aminocyclopropane-1-c 96.9 0.0053 1.8E-07 51.0 9.8 87 47-135 328-430 (435)
30 3ly1_A Putative histidinol-pho 96.9 0.012 4E-07 47.0 11.1 85 46-136 262-351 (354)
31 2z9v_A Aspartate aminotransfer 96.9 0.005 1.7E-07 49.8 8.9 89 47-136 269-370 (392)
32 3ei9_A LL-diaminopimelate amin 96.9 0.0038 1.3E-07 51.7 8.3 85 47-135 332-426 (432)
33 3f0h_A Aminotransferase; RER07 96.8 0.0026 8.8E-08 51.2 6.7 89 47-136 277-373 (376)
34 1svv_A Threonine aldolase; str 96.8 0.0036 1.2E-07 49.6 7.4 84 47-133 267-354 (359)
35 1wyu_A Glycine dehydrogenase ( 96.8 0.0092 3.1E-07 50.0 10.2 87 46-133 342-436 (438)
36 3nnk_A Ureidoglycine-glyoxylat 96.8 0.0052 1.8E-07 49.9 8.4 89 47-136 289-389 (411)
37 1kmj_A Selenocysteine lyase; p 96.7 0.0064 2.2E-07 49.0 8.6 88 47-135 300-403 (406)
38 2vi8_A Serine hydroxymethyltra 96.7 0.0084 2.9E-07 48.6 9.2 89 47-136 279-386 (405)
39 1mdo_A ARNB aminotransferase; 96.7 0.0071 2.4E-07 49.0 8.8 90 46-136 259-385 (393)
40 1qz9_A Kynureninase; kynurenin 96.7 0.01 3.5E-07 48.4 9.5 87 47-136 304-401 (416)
41 3ecd_A Serine hydroxymethyltra 96.7 0.013 4.4E-07 47.7 10.0 88 47-135 289-395 (425)
42 3nra_A Aspartate aminotransfer 96.6 0.0077 2.6E-07 48.9 8.5 86 46-135 305-403 (407)
43 3p1t_A Putative histidinol-pho 96.6 0.014 4.7E-07 46.2 9.5 85 46-135 247-335 (337)
44 3uwc_A Nucleotide-sugar aminot 96.6 0.0096 3.3E-07 47.9 8.7 90 46-136 247-370 (374)
45 1t3i_A Probable cysteine desul 96.6 0.01 3.4E-07 48.2 8.9 89 47-136 304-412 (420)
46 1js3_A DDC;, DOPA decarboxylas 96.6 0.009 3.1E-07 50.7 8.8 90 45-135 373-472 (486)
47 1w23_A Phosphoserine aminotran 96.6 0.015 5.1E-07 46.4 9.6 86 47-134 261-357 (360)
48 3ffh_A Histidinol-phosphate am 96.6 0.019 6.3E-07 46.1 10.2 82 47-133 275-362 (363)
49 2ch1_A 3-hydroxykynurenine tra 96.5 0.014 4.8E-07 47.2 9.4 90 46-136 280-382 (396)
50 1elu_A L-cysteine/L-cystine C- 96.5 0.0069 2.4E-07 48.7 7.5 83 46-131 295-386 (390)
51 2e7j_A SEP-tRNA:Cys-tRNA synth 96.5 0.0052 1.8E-07 49.2 6.2 87 48-135 267-368 (371)
52 3get_A Histidinol-phosphate am 96.4 0.017 5.8E-07 46.3 9.3 84 46-134 276-364 (365)
53 2cb1_A O-acetyl homoserine sul 96.4 0.016 5.6E-07 48.1 9.4 84 47-131 280-410 (412)
54 3cai_A Possible aminotransfera 96.4 0.011 3.9E-07 48.0 8.3 84 47-131 302-403 (406)
55 2oat_A Ornithine aminotransfer 96.4 0.0084 2.9E-07 50.6 7.5 84 47-134 343-436 (439)
56 4eb5_A Probable cysteine desul 96.4 0.016 5.6E-07 46.3 8.8 87 47-135 255-371 (382)
57 3qm2_A Phosphoserine aminotran 96.4 0.021 7.1E-07 48.3 9.7 88 46-136 286-384 (386)
58 3gbx_A Serine hydroxymethyltra 96.3 0.0088 3E-07 48.7 7.1 89 47-136 288-395 (420)
59 2dkj_A Serine hydroxymethyltra 96.3 0.013 4.6E-07 47.5 8.1 89 47-136 280-387 (407)
60 1eg5_A Aminotransferase; PLP-d 96.3 0.02 6.9E-07 45.7 9.0 88 47-135 259-374 (384)
61 3m5u_A Phosphoserine aminotran 96.3 0.022 7.7E-07 47.7 9.7 88 46-135 259-358 (361)
62 3e9k_A Kynureninase; kynurenin 96.3 0.0073 2.5E-07 50.8 6.5 86 46-136 354-460 (465)
63 2zyj_A Alpha-aminodipate amino 96.3 0.027 9.1E-07 45.9 9.6 86 47-134 291-390 (397)
64 1v2d_A Glutamine aminotransfer 96.3 0.034 1.2E-06 44.9 10.2 84 47-134 277-368 (381)
65 2huf_A Alanine glyoxylate amin 96.3 0.029 9.8E-07 45.2 9.7 90 46-136 281-382 (393)
66 3i4j_A Aminotransferase, class 96.2 0.0085 2.9E-07 49.6 6.6 89 46-135 315-426 (430)
67 1v72_A Aldolase; PLP-dependent 96.2 0.026 8.8E-07 44.7 9.1 82 48-134 264-350 (356)
68 3tcm_A Alanine aminotransferas 96.2 0.0097 3.3E-07 51.2 7.0 85 47-135 383-492 (500)
69 3euc_A Histidinol-phosphate am 96.2 0.023 7.9E-07 45.6 8.6 82 47-134 276-365 (367)
70 3g0t_A Putative aminotransfera 96.1 0.015 5E-07 47.9 7.4 88 46-135 333-435 (437)
71 1z7d_A Ornithine aminotransfer 96.1 0.01 3.5E-07 49.9 6.6 85 47-135 332-427 (433)
72 1vp4_A Aminotransferase, putat 96.1 0.025 8.5E-07 46.8 8.9 87 46-134 313-415 (425)
73 3kgw_A Alanine-glyoxylate amin 96.1 0.035 1.2E-06 44.4 9.5 89 47-136 286-387 (393)
74 4hvk_A Probable cysteine desul 96.1 0.037 1.2E-06 43.9 9.5 88 47-135 255-371 (382)
75 3n5m_A Adenosylmethionine-8-am 96.1 0.014 4.8E-07 48.8 7.3 88 46-135 340-450 (452)
76 1b9h_A AHBA synthase, protein 96.1 0.016 5.5E-07 47.0 7.5 88 46-134 252-385 (388)
77 3ruy_A Ornithine aminotransfer 96.1 0.014 4.7E-07 47.5 7.0 83 47-133 302-390 (392)
78 3n0l_A Serine hydroxymethyltra 96.0 0.048 1.6E-06 44.3 9.9 90 46-136 280-388 (417)
79 1rv3_A Serine hydroxymethyltra 96.0 0.018 6.2E-07 49.4 7.7 89 46-135 323-429 (483)
80 3rq1_A Aminotransferase class 96.0 0.033 1.1E-06 45.7 8.9 82 48-136 329-414 (418)
81 1c4k_A Protein (ornithine deca 96.0 0.031 1.1E-06 51.3 9.5 32 104-136 534-565 (730)
82 3cq5_A Histidinol-phosphate am 96.0 0.044 1.5E-06 44.2 9.5 82 47-135 281-366 (369)
83 3e77_A Phosphoserine aminotran 96.0 0.044 1.5E-06 46.3 9.8 89 46-136 271-374 (377)
84 3dr4_A Putative perosamine syn 95.9 0.015 5.3E-07 47.2 6.6 87 45-132 266-388 (391)
85 2bkw_A Alanine-glyoxylate amin 95.9 0.03 1E-06 44.8 8.2 88 47-135 280-382 (385)
86 1ohv_A 4-aminobutyrate aminotr 95.9 0.017 5.7E-07 49.4 6.8 85 47-135 374-469 (472)
87 3fvs_A Kynurenine--oxoglutarat 95.9 0.024 8.1E-07 46.4 7.4 87 46-135 306-420 (422)
88 2c81_A Glutamine-2-deoxy-scyll 95.8 0.032 1.1E-06 46.0 8.1 90 46-136 265-413 (418)
89 1u08_A Hypothetical aminotrans 95.8 0.027 9.1E-07 45.6 7.6 81 47-130 289-383 (386)
90 3b8x_A WBDK, pyridoxamine 5-ph 95.8 0.015 5.2E-07 47.4 5.9 84 46-130 268-389 (390)
91 2fnu_A Aminotransferase; prote 95.7 0.04 1.4E-06 44.0 8.1 90 45-135 245-370 (375)
92 3mc6_A Sphingosine-1-phosphate 95.7 0.042 1.5E-06 46.5 8.6 87 46-135 343-435 (497)
93 1wyu_B Glycine dehydrogenase s 95.7 0.04 1.4E-06 46.8 8.4 89 47-136 343-440 (474)
94 3ele_A Amino transferase; RER0 95.7 0.055 1.9E-06 43.8 8.9 85 47-135 303-394 (398)
95 2ord_A Acoat, acetylornithine 95.6 0.017 5.8E-07 47.1 5.7 84 47-134 301-394 (397)
96 1vjo_A Alanine--glyoxylate ami 95.6 0.052 1.8E-06 43.8 8.3 86 47-133 294-391 (393)
97 3dxv_A Alpha-amino-epsilon-cap 95.5 0.026 8.8E-07 46.8 6.5 89 46-136 318-424 (439)
98 3ftb_A Histidinol-phosphate am 95.5 0.11 3.6E-06 41.3 10.0 82 47-135 266-359 (361)
99 3nx3_A Acoat, acetylornithine 95.5 0.024 8.2E-07 46.1 6.2 86 46-135 298-393 (395)
100 2eh6_A Acoat, acetylornithine 95.5 0.043 1.5E-06 44.0 7.6 80 48-132 290-373 (375)
101 1iay_A ACC synthase 2, 1-amino 95.5 0.14 4.8E-06 42.1 10.9 87 47-135 323-425 (428)
102 2oga_A Transaminase; PLP-depen 95.5 0.068 2.3E-06 43.8 8.9 89 47-136 274-395 (399)
103 3bb8_A CDP-4-keto-6-deoxy-D-gl 95.5 0.063 2.1E-06 44.7 8.7 87 47-134 307-433 (437)
104 3ihj_A Alanine aminotransferas 95.4 0.062 2.1E-06 46.2 8.8 85 47-135 382-491 (498)
105 2jis_A Cysteine sulfinic acid 95.4 0.062 2.1E-06 46.1 8.5 89 46-135 399-513 (515)
106 3nyt_A Aminotransferase WBPE; 95.3 0.078 2.7E-06 42.8 8.6 90 46-136 245-363 (367)
107 3lvm_A Cysteine desulfurase; s 95.3 0.071 2.4E-06 43.4 8.3 88 47-135 283-397 (423)
108 2cjg_A L-lysine-epsilon aminot 95.2 0.043 1.5E-06 46.2 7.0 84 47-134 351-445 (449)
109 1vef_A Acetylornithine/acetyl- 95.2 0.035 1.2E-06 45.1 6.2 83 47-133 304-393 (395)
110 2z61_A Probable aspartate amin 95.2 0.069 2.3E-06 42.9 7.9 84 47-134 276-368 (370)
111 1jg8_A L-ALLO-threonine aldola 95.2 0.055 1.9E-06 42.9 7.1 82 49-135 254-344 (347)
112 3jtx_A Aminotransferase; NP_28 95.1 0.15 5.2E-06 41.1 9.7 84 46-133 296-394 (396)
113 3h14_A Aminotransferase, class 95.1 0.13 4.5E-06 41.6 9.4 87 46-135 281-380 (391)
114 2gb3_A Aspartate aminotransfer 95.1 0.25 8.5E-06 40.4 11.1 86 47-135 297-400 (409)
115 1pff_A Methionine gamma-lyase; 95.1 0.02 6.8E-07 45.4 4.2 85 46-131 196-328 (331)
116 2zc0_A Alanine glyoxylate tran 95.1 0.12 4E-06 42.0 8.9 87 46-134 301-401 (407)
117 3aow_A Putative uncharacterize 95.0 0.12 4.1E-06 43.5 9.2 86 47-134 343-442 (448)
118 2ez2_A Beta-tyrosinase, tyrosi 95.0 0.11 3.7E-06 43.2 8.7 88 47-135 312-429 (456)
119 1gd9_A Aspartate aminotransfer 95.0 0.095 3.2E-06 42.3 8.1 86 47-136 288-385 (389)
120 2okj_A Glutamate decarboxylase 95.0 0.07 2.4E-06 45.5 7.6 90 46-136 384-501 (504)
121 3ezs_A Aminotransferase ASPB; 94.9 0.16 5.3E-06 40.7 9.3 83 46-135 282-373 (376)
122 1fg7_A Histidinol phosphate am 94.9 0.11 3.7E-06 41.9 8.2 82 46-132 265-353 (356)
123 3dod_A Adenosylmethionine-8-am 94.8 0.078 2.7E-06 44.4 7.4 85 46-135 337-441 (448)
124 1o69_A Aminotransferase; struc 94.8 0.097 3.3E-06 42.9 7.8 91 45-137 244-387 (394)
125 2x5d_A Probable aminotransfera 94.8 0.19 6.4E-06 41.1 9.5 86 47-136 298-397 (412)
126 3dyd_A Tyrosine aminotransfera 94.8 0.11 3.8E-06 43.0 8.2 87 46-135 322-422 (427)
127 3asa_A LL-diaminopimelate amin 94.8 0.057 2E-06 44.2 6.3 87 45-134 293-390 (400)
128 3dzz_A Putative pyridoxal 5'-p 94.7 0.18 6.3E-06 40.3 9.2 85 46-135 288-387 (391)
129 1o4s_A Aspartate aminotransfer 94.6 0.25 8.6E-06 40.1 9.8 82 46-134 295-386 (389)
130 3tfu_A Adenosylmethionine-8-am 94.5 0.072 2.4E-06 45.3 6.5 86 46-136 358-452 (457)
131 1yiz_A Kynurenine aminotransfe 94.5 0.13 4.4E-06 42.2 7.9 84 47-133 315-425 (429)
132 2z67_A O-phosphoseryl-tRNA(SEC 94.4 0.11 3.9E-06 43.8 7.6 82 46-132 348-453 (456)
133 3oks_A 4-aminobutyrate transam 94.4 0.089 3E-06 44.3 6.8 88 46-135 345-449 (451)
134 2o0r_A RV0858C (N-succinyldiam 94.4 0.13 4.5E-06 42.0 7.6 85 47-134 286-393 (411)
135 1zod_A DGD, 2,2-dialkylglycine 94.4 0.084 2.9E-06 43.5 6.5 87 47-134 324-429 (433)
136 2oqx_A Tryptophanase; lyase, p 94.3 0.14 4.7E-06 42.6 7.7 86 48-135 325-440 (467)
137 4adb_A Succinylornithine trans 94.3 0.12 4.2E-06 41.7 7.3 86 45-135 300-398 (406)
138 1lc5_A COBD, L-threonine-O-3-p 94.3 0.24 8.2E-06 39.7 8.9 83 47-136 267-359 (364)
139 1sff_A 4-aminobutyrate aminotr 94.3 0.091 3.1E-06 42.9 6.5 87 47-135 318-422 (426)
140 3h7f_A Serine hydroxymethyltra 94.2 0.12 4.1E-06 43.4 7.2 86 46-135 300-412 (447)
141 3kax_A Aminotransferase, class 94.2 0.3 1E-05 38.9 9.2 84 46-133 284-381 (383)
142 3fdb_A Beta C-S lyase, putativ 94.1 0.27 9.4E-06 39.1 8.9 86 47-135 277-374 (377)
143 2eo5_A 419AA long hypothetical 94.1 0.086 2.9E-06 43.6 6.1 81 49-135 330-416 (419)
144 4dq6_A Putative pyridoxal phos 94.1 0.34 1.2E-05 38.7 9.5 84 46-133 292-389 (391)
145 4ffc_A 4-aminobutyrate aminotr 94.1 0.12 4.3E-06 43.5 7.1 88 46-135 343-447 (453)
146 1uu1_A Histidinol-phosphate am 94.1 0.24 8.3E-06 39.3 8.5 77 46-131 251-332 (335)
147 2pb2_A Acetylornithine/succiny 94.1 0.12 4.2E-06 42.9 6.9 85 46-134 319-415 (420)
148 3t18_A Aminotransferase class 94.0 0.22 7.5E-06 40.6 8.2 80 48-133 327-410 (413)
149 1s0a_A Adenosylmethionine-8-am 94.0 0.092 3.2E-06 43.3 5.9 83 47-134 330-421 (429)
150 3gju_A Putative aminotransfera 93.9 0.11 3.8E-06 43.6 6.5 87 46-135 347-454 (460)
151 3fkd_A L-threonine-O-3-phospha 93.9 0.36 1.2E-05 38.3 9.2 83 47-136 247-341 (350)
152 1gc0_A Methionine gamma-lyase; 93.9 0.37 1.3E-05 39.5 9.4 88 45-133 261-397 (398)
153 2x5f_A Aspartate_tyrosine_phen 93.6 0.19 6.4E-06 41.4 7.2 81 49-135 336-427 (430)
154 3op7_A Aminotransferase class 93.6 0.21 7E-06 40.0 7.3 87 47-136 275-370 (375)
155 2po3_A 4-dehydrase; external a 93.5 0.31 1.1E-05 40.1 8.4 87 47-134 260-383 (424)
156 3a8u_X Omega-amino acid--pyruv 93.4 0.2 7E-06 41.5 7.2 84 47-135 348-445 (449)
157 1j32_A Aspartate aminotransfer 93.4 0.27 9.1E-06 39.6 7.7 84 47-134 290-384 (388)
158 3vax_A Putative uncharacterize 93.4 0.15 5.1E-06 41.1 6.1 87 47-134 283-397 (400)
159 1bw0_A TAT, protein (tyrosine 93.3 0.4 1.4E-05 39.0 8.6 85 47-134 312-410 (416)
160 3jzl_A Putative cystathionine 93.2 0.082 2.8E-06 44.8 4.4 49 45-94 279-332 (409)
161 3hmu_A Aminotransferase, class 93.1 0.17 5.7E-06 43.2 6.2 85 46-135 344-450 (472)
162 3e2y_A Kynurenine-oxoglutarate 93.0 0.17 5.8E-06 41.0 5.9 83 46-131 299-407 (410)
163 1n8p_A Cystathionine gamma-lya 93.0 0.64 2.2E-05 38.4 9.5 89 45-134 252-392 (393)
164 4eu1_A Mitochondrial aspartate 92.9 0.12 4E-06 42.3 4.9 78 46-134 323-408 (409)
165 3a9z_A Selenocysteine lyase; P 92.8 0.34 1.2E-05 39.6 7.6 88 47-135 305-426 (432)
166 3mad_A Sphingosine-1-phosphate 92.8 0.34 1.2E-05 41.2 7.8 86 46-134 375-466 (514)
167 1xi9_A Putative transaminase; 92.8 0.32 1.1E-05 39.6 7.4 85 47-135 303-401 (406)
168 3lws_A Aromatic amino acid bet 92.8 0.18 6.3E-06 40.1 5.7 78 48-127 256-350 (357)
169 2e7u_A Glutamate-1-semialdehyd 92.7 0.3 1E-05 40.2 7.2 80 47-132 320-422 (424)
170 3i5t_A Aminotransferase; pyrid 92.7 0.24 8.2E-06 42.2 6.7 84 46-134 348-451 (476)
171 2o1b_A Aminotransferase, class 92.7 0.29 1E-05 40.1 7.0 83 47-133 306-399 (404)
172 1cs1_A CGS, protein (cystathio 92.7 0.87 3E-05 36.9 9.8 88 46-134 248-384 (386)
173 3ez1_A Aminotransferase MOCR f 92.5 0.74 2.5E-05 37.6 9.2 30 103-134 383-412 (423)
174 2dou_A Probable N-succinyldiam 92.3 0.42 1.4E-05 38.3 7.3 81 47-132 283-373 (376)
175 3d6k_A Putative aminotransfera 92.2 0.86 2.9E-05 37.5 9.3 86 47-134 313-415 (422)
176 3l44_A Glutamate-1-semialdehyd 92.2 0.48 1.6E-05 39.0 7.8 84 46-135 322-428 (434)
177 2rfv_A Methionine gamma-lyase; 92.1 0.43 1.5E-05 39.0 7.2 86 46-132 261-395 (398)
178 2epj_A Glutamate-1-semialdehyd 92.1 0.43 1.5E-05 39.4 7.3 82 47-134 324-428 (434)
179 2cy8_A D-phgat, D-phenylglycin 91.8 0.59 2E-05 38.8 7.9 99 46-152 323-451 (453)
180 3g7q_A Valine-pyruvate aminotr 91.8 0.83 2.8E-05 36.9 8.6 83 49-134 307-410 (417)
181 4e77_A Glutamate-1-semialdehyd 91.6 0.63 2.2E-05 38.3 7.8 84 46-135 320-427 (429)
182 3if2_A Aminotransferase; YP_26 91.6 0.55 1.9E-05 38.6 7.4 83 49-134 333-437 (444)
183 4ao9_A Beta-phenylalanine amin 91.5 0.22 7.4E-06 43.2 5.1 88 41-136 335-445 (454)
184 3pj0_A LMO0305 protein; struct 91.4 0.35 1.2E-05 38.3 5.9 79 48-127 258-353 (359)
185 3k28_A Glutamate-1-semialdehyd 91.4 0.69 2.4E-05 38.1 7.8 83 47-135 320-425 (429)
186 3f6t_A Aspartate aminotransfer 91.2 1.1 3.8E-05 38.7 9.3 83 47-135 413-523 (533)
187 2r2n_A Kynurenine/alpha-aminoa 91.1 0.94 3.2E-05 37.2 8.4 86 47-134 320-421 (425)
188 4a6r_A Omega transaminase; tra 91.1 0.32 1.1E-05 40.8 5.6 85 46-135 341-447 (459)
189 1b5p_A Protein (aspartate amin 90.9 0.84 2.9E-05 36.9 7.8 75 47-127 290-376 (385)
190 3l8a_A METC, putative aminotra 90.9 0.84 2.9E-05 37.4 7.9 83 47-133 323-418 (421)
191 1yaa_A Aspartate aminotransfer 90.8 0.28 9.7E-06 39.9 4.9 79 46-135 323-409 (412)
192 1ax4_A Tryptophanase; tryptoph 90.7 1.7 5.7E-05 35.9 9.6 86 48-134 323-438 (467)
193 3i16_A Aluminum resistance pro 90.5 0.5 1.7E-05 40.3 6.3 49 45-94 296-349 (427)
194 3fsl_A Aromatic-amino-acid ami 90.4 0.37 1.3E-05 38.8 5.1 76 46-132 312-395 (397)
195 3b46_A Aminotransferase BNA3; 90.3 0.71 2.4E-05 38.4 7.0 84 47-133 330-443 (447)
196 1c7n_A Cystalysin; transferase 90.3 2 7E-05 34.4 9.5 84 47-135 293-391 (399)
197 1d2f_A MALY protein; aminotran 90.1 2.3 7.9E-05 34.0 9.7 84 47-134 289-386 (390)
198 3ppl_A Aspartate aminotransfer 89.9 2.3 7.9E-05 34.7 9.7 85 48-134 316-417 (427)
199 3hvy_A Cystathionine beta-lyas 89.6 0.51 1.8E-05 40.3 5.6 49 45-94 296-349 (427)
200 3bwn_A AT1G70560, L-tryptophan 89.5 0.73 2.5E-05 37.8 6.3 80 47-132 281-382 (391)
201 3fq8_A Glutamate-1-semialdehyd 89.5 1.3 4.4E-05 36.3 7.9 84 46-135 319-425 (427)
202 3cog_A Cystathionine gamma-lya 89.3 0.73 2.5E-05 38.2 6.2 89 46-135 263-400 (403)
203 7aat_A Aspartate aminotransfer 88.7 0.7 2.4E-05 37.3 5.6 77 46-133 315-399 (401)
204 3ju7_A Putative PLP-dependent 88.6 1.6 5.5E-05 35.8 7.9 88 45-133 249-371 (377)
205 2ctz_A O-acetyl-L-homoserine s 88.5 1.4 4.8E-05 36.6 7.5 81 47-127 288-418 (421)
206 4f4e_A Aromatic-amino-acid ami 87.8 0.85 2.9E-05 37.4 5.7 76 47-133 335-418 (420)
207 2ay1_A Aroat, aromatic amino a 87.7 0.51 1.7E-05 38.0 4.1 77 46-133 308-392 (394)
208 1ajs_A Aspartate aminotransfer 87.5 0.74 2.5E-05 37.3 5.0 78 47-135 324-409 (412)
209 2hox_A ALLIIN lyase 1; cystein 87.2 2.2 7.5E-05 35.6 7.9 81 48-134 317-422 (427)
210 2q7w_A Aspartate aminotransfer 86.5 0.62 2.1E-05 37.4 4.0 75 47-132 312-394 (396)
211 2fq6_A Cystathionine beta-lyas 86.3 3.2 0.00011 34.8 8.5 85 46-131 279-412 (415)
212 3qhx_A Cystathionine gamma-syn 85.2 4 0.00014 33.4 8.4 83 47-130 263-391 (392)
213 2x3l_A ORN/Lys/Arg decarboxyla 85.2 1.3 4.6E-05 37.2 5.6 79 49-137 269-353 (446)
214 3acz_A Methionine gamma-lyase; 83.6 3.4 0.00011 33.7 7.2 84 47-131 256-387 (389)
215 2vyc_A Biodegradative arginine 82.2 3.3 0.00011 37.8 7.3 31 105-136 574-604 (755)
216 3ht4_A Aluminum resistance pro 80.3 3.2 0.00011 35.0 6.1 49 45-94 285-338 (431)
217 2yky_A Beta-transaminase; tran 78.4 0.51 1.7E-05 40.8 0.0 83 45-135 353-458 (465)
218 4a0g_A Adenosylmethionine-8-am 76.4 3 0.0001 38.7 5.1 34 106-140 798-831 (831)
219 3ou5_A Serine hydroxymethyltra 74.5 10 0.00034 33.6 7.7 89 43-132 330-436 (490)
220 3meb_A Aspartate aminotransfer 73.8 5 0.00017 33.3 5.4 80 46-135 350-442 (448)
221 3vp6_A Glutamate decarboxylase 72.2 10 0.00035 32.4 7.1 66 2-71 389-464 (511)
222 1qgn_A Protein (cystathionine 71.7 6 0.00021 33.6 5.5 83 47-134 311-442 (445)
223 3b1d_A Betac-S lyase; HET: PLP 73.4 0.88 3E-05 36.8 0.0 83 47-133 293-389 (392)
224 2gjh_A Designed protein; oblig 67.5 11 0.00037 23.6 4.6 32 107-140 2-33 (62)
225 1e5e_A MGL, methionine gamma-l 66.0 29 0.00098 28.3 8.4 83 46-133 260-391 (404)
226 2zy4_A L-aspartate beta-decarb 64.6 21 0.00071 30.9 7.6 28 105-134 492-519 (546)
227 3f9t_A TDC, L-tyrosine decarbo 60.3 42 0.0014 26.0 8.1 67 3-85 310-376 (397)
228 3ht4_A Aluminum resistance pro 58.5 19 0.00066 30.2 6.1 113 3-134 289-415 (431)
229 2aeu_A Hypothetical protein MJ 56.9 11 0.00038 30.5 4.2 31 103-134 337-368 (374)
230 4atq_A 4-aminobutyrate transam 54.1 24 0.00084 30.0 6.1 89 44-135 342-453 (456)
231 1qys_A TOP7; alpha-beta, novel 53.7 25 0.00086 24.0 4.9 36 104-141 43-78 (106)
232 3nmy_A Xometc, cystathionine g 50.7 62 0.0021 26.5 7.9 85 46-131 264-397 (400)
233 2w8t_A SPT, serine palmitoyltr 48.7 22 0.00074 29.0 4.7 26 3-28 317-342 (427)
234 2ebm_A RWD domain-containing p 48.2 31 0.0011 23.8 4.9 46 95-144 63-110 (128)
235 3jzl_A Putative cystathionine 48.1 44 0.0015 27.8 6.6 26 3-28 283-308 (409)
236 3nnk_A Ureidoglycine-glyoxylat 46.9 21 0.0007 28.3 4.2 26 3-28 291-316 (411)
237 4hvk_A Probable cysteine desul 46.5 24 0.00082 27.3 4.5 26 3-28 257-283 (382)
238 1eg5_A Aminotransferase; PLP-d 45.8 30 0.001 26.9 5.0 26 3-28 261-286 (384)
239 3kgw_A Alanine-glyoxylate amin 44.6 25 0.00087 27.4 4.4 25 3-27 288-312 (393)
240 3isl_A Purine catabolism prote 44.0 25 0.00084 27.9 4.3 26 3-28 291-316 (416)
241 3ri6_A O-acetylhomoserine sulf 43.4 98 0.0034 25.8 8.1 82 46-127 298-427 (430)
242 3ry0_A Putative tautomerase; o 43.3 39 0.0014 20.4 4.3 31 107-137 1-31 (65)
243 2dsy_A Hypothetical protein TT 42.6 69 0.0024 21.0 5.8 61 11-71 8-71 (87)
244 2day_A Ring finger protein 25; 40.8 35 0.0012 23.5 4.2 46 95-144 67-114 (128)
245 3ei9_A LL-diaminopimelate amin 40.2 29 0.001 28.0 4.2 26 3-28 334-359 (432)
246 3dr4_A Putative perosamine syn 39.4 48 0.0017 26.2 5.4 26 3-28 270-295 (391)
247 4eb5_A Probable cysteine desul 38.9 45 0.0015 25.9 5.0 26 3-28 257-283 (382)
248 3k40_A Aromatic-L-amino-acid d 38.8 37 0.0013 28.5 4.7 26 3-28 374-400 (475)
249 3ffr_A Phosphoserine aminotran 37.8 28 0.00096 26.8 3.6 25 3-27 267-292 (362)
250 2okj_A Glutamate decarboxylase 37.7 59 0.002 27.2 5.9 64 3-70 387-460 (504)
251 3b8x_A WBDK, pyridoxamine 5-ph 37.7 43 0.0015 26.5 4.8 26 3-28 271-297 (390)
252 3i16_A Aluminum resistance pro 36.7 74 0.0025 26.7 6.3 25 4-28 301-325 (427)
253 2jis_A Cysteine sulfinic acid 36.6 63 0.0022 27.2 5.9 62 3-70 402-473 (515)
254 3lvm_A Cysteine desulfurase; s 36.4 28 0.00094 27.8 3.4 27 3-29 285-312 (423)
255 3ke3_A Putative serine-pyruvat 35.9 28 0.00097 27.8 3.4 25 4-28 277-301 (379)
256 2a7v_A Serine hydroxymethyltra 35.4 27 0.00092 30.1 3.4 24 3-26 336-359 (490)
257 3nyt_A Aminotransferase WBPE; 35.3 44 0.0015 26.3 4.5 24 3-26 248-271 (367)
258 3bc8_A O-phosphoseryl-tRNA(SEC 35.2 2.1E+02 0.0073 24.4 9.3 29 106-135 413-441 (450)
259 1ukx_A GCN2, GCN2 EIF2alpha ki 35.1 19 0.00064 25.2 2.0 46 95-144 71-118 (137)
260 2yz0_A Serine/threonine-protei 34.8 37 0.0013 23.8 3.5 46 95-144 70-117 (138)
261 4e1o_A HDC, histidine decarbox 34.1 44 0.0015 28.0 4.5 26 3-28 381-407 (481)
262 3zrp_A Serine-pyruvate aminotr 33.7 33 0.0011 26.7 3.4 26 3-28 267-292 (384)
263 2z9v_A Aspartate aminotransfer 33.5 44 0.0015 26.2 4.2 25 3-27 271-295 (392)
264 2qma_A Diaminobutyrate-pyruvat 33.5 44 0.0015 27.9 4.4 26 3-28 395-421 (497)
265 2huf_A Alanine glyoxylate amin 33.3 45 0.0015 26.1 4.2 26 3-28 284-309 (393)
266 4h51_A Aspartate aminotransfer 33.0 1.2E+02 0.0039 25.4 6.9 79 48-135 332-415 (420)
267 3m21_A Probable tautomerase HP 32.5 59 0.002 19.7 3.9 31 108-138 2-35 (67)
268 3qgu_A LL-diaminopimelate amin 32.4 34 0.0012 27.8 3.4 26 3-28 346-371 (449)
269 2yrr_A Aminotransferase, class 31.7 36 0.0012 26.0 3.3 25 3-27 256-280 (353)
270 2p10_A MLL9387 protein; putati 31.0 2.2E+02 0.0075 23.3 9.2 111 11-146 110-233 (286)
271 2fnu_A Aminotransferase; prote 30.9 73 0.0025 24.6 5.0 26 3-28 249-275 (375)
272 1ibj_A CBL, cystathionine beta 30.4 1.8E+02 0.0062 24.3 7.8 25 106-135 436-460 (464)
273 3uwc_A Nucleotide-sugar aminot 29.6 57 0.002 25.4 4.2 24 3-26 250-275 (374)
274 3mb2_A 4-oxalocrotonate tautom 29.5 82 0.0028 19.4 4.2 31 107-137 2-32 (72)
275 2dr1_A PH1308 protein, 386AA l 29.2 55 0.0019 25.4 4.0 25 3-27 282-306 (386)
276 3hdo_A Histidinol-phosphate am 28.9 71 0.0024 24.9 4.7 24 3-26 266-289 (360)
277 1otf_A 4-oxalocrotonate tautom 28.8 89 0.003 18.1 4.5 30 108-137 2-31 (62)
278 1jr5_A 10 kDa anti-sigma facto 28.7 22 0.00074 24.5 1.3 24 5-28 24-47 (90)
279 1wyu_A Glycine dehydrogenase ( 28.5 38 0.0013 27.7 3.0 25 4-28 346-371 (438)
280 3hvy_A Cystathionine beta-lyas 28.4 1.2E+02 0.0042 25.3 6.3 26 3-28 300-325 (427)
281 3cai_A Possible aminotransfera 28.2 81 0.0028 24.8 4.9 25 4-28 305-330 (406)
282 2vi8_A Serine hydroxymethyltra 28.0 42 0.0014 26.4 3.2 26 3-28 281-306 (405)
283 1b9h_A AHBA synthase, protein 27.7 83 0.0028 24.7 4.9 26 3-28 255-281 (388)
284 1gyx_A YDCE, B1461, hypothetic 27.6 86 0.0029 19.5 4.1 31 108-138 2-33 (76)
285 3ej9_A Alpha-subunit of trans- 27.3 94 0.0032 19.5 4.3 32 107-138 2-33 (76)
286 1iug_A Putative aspartate amin 27.2 48 0.0016 25.4 3.3 25 3-27 253-277 (352)
287 2c81_A Glutamine-2-deoxy-scyll 26.8 92 0.0031 24.9 5.1 26 3-28 268-294 (418)
288 2x4k_A 4-oxalocrotonate tautom 26.1 98 0.0034 17.7 4.5 30 107-136 4-33 (63)
289 1c4k_A Protein (ornithine deca 26.0 44 0.0015 30.4 3.2 26 3-28 420-447 (730)
290 3vax_A Putative uncharacterize 26.0 91 0.0031 24.4 4.8 26 3-28 285-310 (400)
291 3gbx_A Serine hydroxymethyltra 25.9 48 0.0017 26.2 3.2 25 3-27 290-314 (420)
292 3ndn_A O-succinylhomoserine su 25.8 2.7E+02 0.0093 22.7 8.4 22 46-67 277-298 (414)
293 3kki_A CAI-1 autoinducer synth 25.7 39 0.0013 27.0 2.6 24 3-26 309-332 (409)
294 3f0h_A Aminotransferase; RER07 25.2 68 0.0023 24.9 3.9 26 3-28 279-304 (376)
295 2c0r_A PSAT, phosphoserine ami 25.0 66 0.0023 25.0 3.8 25 3-27 264-290 (362)
296 2opa_A Probable tautomerase YW 24.7 1.1E+02 0.0037 17.7 4.5 31 108-138 2-32 (61)
297 2dkj_A Serine hydroxymethyltra 24.6 53 0.0018 25.9 3.2 26 3-28 282-307 (407)
298 1m32_A 2-aminoethylphosphonate 24.2 46 0.0016 25.5 2.7 26 3-28 267-292 (366)
299 2juz_A UPF0352 protein HI0840; 24.1 51 0.0017 22.2 2.5 32 113-144 3-34 (80)
300 2jr2_A UPF0352 protein CPS_261 23.8 47 0.0016 22.1 2.2 32 113-144 3-34 (76)
301 2fi0_A Conserved domain protei 23.7 41 0.0014 21.9 1.9 17 12-28 64-80 (81)
302 1vjo_A Alanine--glyoxylate ami 23.6 47 0.0016 26.1 2.7 25 3-27 296-320 (393)
303 1rv3_A Serine hydroxymethyltra 23.6 87 0.003 26.2 4.5 26 3-28 326-351 (483)
304 3asa_A LL-diaminopimelate amin 23.5 74 0.0025 25.3 3.9 26 2-27 296-321 (400)
305 2bwn_A 5-aminolevulinate synth 23.4 48 0.0016 26.3 2.7 25 3-27 303-327 (401)
306 3mc6_A Sphingosine-1-phosphate 23.4 58 0.002 26.9 3.3 55 3-71 346-402 (497)
307 2juw_A UPF0352 protein SO_2176 23.4 53 0.0018 22.1 2.4 32 113-144 3-34 (80)
308 3hbx_A GAD 1, glutamate decarb 23.1 1E+02 0.0035 25.9 4.9 25 3-27 343-368 (502)
309 1v2d_A Glutamine aminotransfer 23.1 61 0.0021 25.4 3.2 25 3-27 279-303 (381)
310 3n0l_A Serine hydroxymethyltra 22.8 60 0.002 25.6 3.2 25 3-27 283-307 (417)
311 2jpq_A UPF0352 protein VP2129; 22.0 55 0.0019 22.1 2.3 32 113-144 3-34 (83)
312 3k7y_A Aspartate aminotransfer 21.7 2.2E+02 0.0075 23.3 6.6 76 48-134 316-402 (405)
313 2ebk_A RWD domain-containing p 21.6 87 0.003 21.5 3.5 45 95-144 64-110 (128)
314 2ch1_A 3-hydroxykynurenine tra 21.5 53 0.0018 25.8 2.6 26 3-28 283-308 (396)
315 2ke4_A CDC42-interacting prote 21.5 88 0.003 21.4 3.4 28 28-66 6-33 (98)
316 3nrt_A Putative ryanodine rece 21.5 2E+02 0.0069 19.7 6.5 66 3-71 30-99 (103)
317 1h3d_A ATP-phosphoribosyltrans 21.3 80 0.0027 25.9 3.7 89 47-145 204-293 (299)
318 2jrx_A UPF0352 protein YEJL; h 20.8 55 0.0019 22.1 2.1 32 113-144 3-34 (83)
319 1elu_A L-cysteine/L-cystine C- 20.6 75 0.0026 24.7 3.3 25 3-27 298-323 (390)
320 3ecd_A Serine hydroxymethyltra 20.6 71 0.0024 25.2 3.2 25 3-27 291-315 (425)
321 2bkw_A Alanine-glyoxylate amin 20.2 1.6E+02 0.0055 22.6 5.2 24 4-27 283-307 (385)
322 3tqx_A 2-amino-3-ketobutyrate 20.1 62 0.0021 25.3 2.7 24 3-26 300-323 (399)
No 1
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=98.67 E-value=9.8e-08 Score=80.21 Aligned_cols=89 Identities=15% Similarity=0.005 Sum_probs=73.0
Q ss_pred chHHHHHHHHHHHHHHHHHHhCCCcccCCC-CCCeEEEEcCCchHHHhcc----------ccccCCCCCCCCceEEEEee
Q psy5049 46 GIRRISVLAHNTRYFRRKLNRLGLIVYGHR-DSPVVPVLVFFFSKVGQTS----------IGLGVEQTALNDGLSLYESS 114 (153)
Q Consensus 46 ~~~rr~~L~~ni~~fr~~L~~~G~~~~~~s-~SPIiPV~~g~~~~~~~~a----------~~i~~PtVP~g~~RlRI~ls 114 (153)
.++++++++++..+|++.|++.|+.+.+.+ .++++++.+++.....++. .+..+|++|.+...+||+++
T Consensus 314 ~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRi~~~ 393 (427)
T 2w8t_A 314 AHEKRERLWSNARALHGGLKAMGFRLGTETCDSAIVAVMLEDQEQAAMMWQALLDGGLYVNMARPPATPAGTFLLRCSIC 393 (427)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTCEESCSSCCSSEEEEEESSHHHHHHHHHHHHHTTEECEEECTTTSCTTCEEEEEECC
T ss_pred CHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCCCEEEEEECCHHHHHHHHHHHHHCCeEEeeeCCCCCCCCCeEEEEEeC
Confidence 378999999999999999999898764345 6899999998754333332 45588999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHh
Q psy5049 115 HLRSANLWNRPHSPSLMAVFR 135 (153)
Q Consensus 115 A~HT~edId~L~~~~L~~~~~ 135 (153)
+.||++||+++++ +|+.+.+
T Consensus 394 ~~~t~e~i~~~~~-~l~~~l~ 413 (427)
T 2w8t_A 394 AEHTPAQIQTVLG-MFQAAGR 413 (427)
T ss_dssp TTCCHHHHHHHHH-HHHHHHH
T ss_pred CCCCHHHHHHHHH-HHHHHHH
Confidence 9999999999999 8876654
No 2
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=98.40 E-value=2e-06 Score=71.26 Aligned_cols=88 Identities=13% Similarity=0.008 Sum_probs=72.7
Q ss_pred chHHHHHHHHHHHHHHHHHHhCCCcccCCCCCCeEEEEcCCchHHHhcc----------ccccCCCCCCCCceEEEEeeC
Q psy5049 46 GIRRISVLAHNTRYFRRKLNRLGLIVYGHRDSPVVPVLVFFFSKVGQTS----------IGLGVEQTALNDGLSLYESSH 115 (153)
Q Consensus 46 ~~~rr~~L~~ni~~fr~~L~~~G~~~~~~s~SPIiPV~~g~~~~~~~~a----------~~i~~PtVP~g~~RlRI~lsA 115 (153)
.++++++++++..++++.|++.|+.+. +.++++.+.+++.....++. .+..+|++|.+...+||+++.
T Consensus 306 ~~~~~~~~~~~~~~l~~~L~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~L~~~Gv~v~~~~~~~~~~~~~~iRi~~~~ 383 (409)
T 3kki_A 306 ADNRRQHLDRMARKLRIGLSQLGLTIR--SESQIIGLETGDERNTEKVRDYLESNGVFGSVFCRPATSKNKNIIRLSLNS 383 (409)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTTCCCC--CSSSEEEEEEESHHHHHHHHHHHHHTTEECEEECTTSSCTTCEEEEEECCT
T ss_pred CHHHHHHHHHHHHHHHHHHHHcCCccC--CCCCEEEEEeCCHHHHHHHHHHHHHCCceEeeeCCCCcCCCCcEEEEEccC
Confidence 368899999999999999999998873 56899999988754333332 455788899999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHhc
Q psy5049 116 LRSANLWNRPHSPSLMAVFRG 136 (153)
Q Consensus 116 ~HT~edId~L~~~~L~~~~~~ 136 (153)
.+|+|||+++++ +|+.+.+.
T Consensus 384 ~~t~e~i~~~~~-~l~~~l~~ 403 (409)
T 3kki_A 384 DVNDEQIAKIIE-VCSDAVNY 403 (409)
T ss_dssp TCCHHHHHHHHH-HHHHHHHH
T ss_pred CCCHHHHHHHHH-HHHHHHhc
Confidence 999999999999 88766554
No 3
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=98.24 E-value=7.9e-06 Score=66.53 Aligned_cols=89 Identities=18% Similarity=0.299 Sum_probs=72.4
Q ss_pred chHHHHHHHHHHHHHHHHHHhCCCcccCCCCCCeEEEEcCCchHHHhcc----------ccccCCCCCCCCceEEEEeeC
Q psy5049 46 GIRRISVLAHNTRYFRRKLNRLGLIVYGHRDSPVVPVLVFFFSKVGQTS----------IGLGVEQTALNDGLSLYESSH 115 (153)
Q Consensus 46 ~~~rr~~L~~ni~~fr~~L~~~G~~~~~~s~SPIiPV~~g~~~~~~~~a----------~~i~~PtVP~g~~RlRI~lsA 115 (153)
.++.+++++++..++.+.|.+.|+.+. .+.++++.+.+.+.....++. .+..||+++.+...+||+++.
T Consensus 297 ~~~~~~~~~~~~~~l~~~L~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~iRi~~~~ 375 (399)
T 3tqx_A 297 GPQLRKQLQENSRYFRAGMEKLGFQLV-PGNHPIIPVMLGDAQLATNMADHLLQEGIYVVGFSYPVVPMGKARIRVQMSA 375 (399)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCCBC-CCSSSEEEEEEECHHHHHHHHHHHHHTTEECCEECTTTSCTTCEEEEEECCT
T ss_pred cHHHHHHHHHHHHHHHHHHHHcCCCcC-CCCCCEEEEEeCCHHHHHHHHHHHHHCCCEEeeeCCCCCCCCCceEEEEeec
Confidence 478899999999999999999998774 577889988887653333332 445788889899999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHhc
Q psy5049 116 LRSANLWNRPHSPSLMAVFRG 136 (153)
Q Consensus 116 ~HT~edId~L~~~~L~~~~~~ 136 (153)
.+|++|++++++ +|+.+.+.
T Consensus 376 ~~~~~~i~~~~~-~l~~~~~~ 395 (399)
T 3tqx_A 376 VHTQQQLDRAIE-AFGQVGKK 395 (399)
T ss_dssp TCCHHHHHHHHH-HHHHHHHH
T ss_pred CCCHHHHHHHHH-HHHHHHHH
Confidence 999999999999 88776654
No 4
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=98.17 E-value=4.4e-06 Score=68.98 Aligned_cols=89 Identities=9% Similarity=-0.167 Sum_probs=65.1
Q ss_pred chHHHHHHHHHHHHHHHHHHhCCCcccCCC--CCCeEEEEcCCchHHH--hcc-------ccccCCCC--CCCCceEEEE
Q psy5049 46 GIRRISVLAHNTRYFRRKLNRLGLIVYGHR--DSPVVPVLVFFFSKVG--QTS-------IGLGVEQT--ALNDGLSLYE 112 (153)
Q Consensus 46 ~~~rr~~L~~ni~~fr~~L~~~G~~~~~~s--~SPIiPV~~g~~~~~~--~~a-------~~i~~PtV--P~g~~RlRI~ 112 (153)
.++++++++++..++++.|.+.|+.+.... .+|+++.+..++.... ... .+..+|+| |.+..++||+
T Consensus 273 ~~~~~~~~~~l~~~l~~~l~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~L~~~Gi~v~~g~~~~~~~~~~~~~lRis 352 (379)
T 3ke3_A 273 FDILRDAQWELGNRVRKVLTDKGIESVAAEGFEAPGVVVSYTERDDMHKGSAFAEAGLQIAAGVPLKVGEPDNFKTFRLG 352 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCBSBCTTCBCSSEEEEECSCHHHHSSHHHHHTTCCCEECCCCSSCCCTTCCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCEecCCccccCceEEEEccCCcchHHHHHHHHCCeEEeCCccccccccCcCCEEEEe
Confidence 368899999999999999999998765432 2787776655433221 111 23345665 6668999999
Q ss_pred eeCCCCHHHHHHHHHHHHHHHHh
Q psy5049 113 SSHLRSANLWNRPHSPSLMAVFR 135 (153)
Q Consensus 113 lsA~HT~edId~L~~~~L~~~~~ 135 (153)
++..||++||+++++ +|+.+.+
T Consensus 353 ~~~~~t~~di~~~~~-~l~~~l~ 374 (379)
T 3ke3_A 353 LFGLDKLTDIDGTVE-RFEKALD 374 (379)
T ss_dssp CCSHHHHTCHHHHHH-HHHHHHH
T ss_pred CCcCCCHHHHHHHHH-HHHHHHH
Confidence 999999999999998 7776543
No 5
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=98.13 E-value=1.3e-05 Score=65.75 Aligned_cols=87 Identities=10% Similarity=0.112 Sum_probs=66.6
Q ss_pred hHHHHHHHHHHHHHHHHHHhCCCcccCCCCCCeEEEEcCCchHHHhcc-----------ccccCCCCCCCCceEEEEeeC
Q psy5049 47 IRRISVLAHNTRYFRRKLNRLGLIVYGHRDSPVVPVLVFFFSKVGQTS-----------IGLGVEQTALNDGLSLYESSH 115 (153)
Q Consensus 47 ~~rr~~L~~ni~~fr~~L~~~G~~~~~~s~SPIiPV~~g~~~~~~~~a-----------~~i~~PtVP~g~~RlRI~lsA 115 (153)
++.+++++++..++.+.|.+.|+.+.+ +.++++++.+++.....++. .+..+|.+|.|...+|++++.
T Consensus 301 ~~~~~~~~~~~~~l~~~L~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~L~~~~gi~v~~~~~~~~~~~~~~iRis~~~ 379 (401)
T 2bwn_A 301 QKLRDAQQMHAKVLKMRLKALGMPIID-HGSHIVPVVIGDPVHTKAVSDMLLSDYGVYVQPINFPTVPRGTERLRFTPSP 379 (401)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCBCC-CSSSCEEEECCCHHHHHHHHHHHHHHHCEECCEECTTTSCTTCCEEEECCCT
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCcccC-CCCCeEEEEeCChHHHHHHHHHHHhcCCEEEeecCCCCCCCCCceEEEEeeC
Confidence 678999999999999999988887653 56789999887532211111 334567777777899999999
Q ss_pred CCCHHHHHHHHHHHHHHHHh
Q psy5049 116 LRSANLWNRPHSPSLMAVFR 135 (153)
Q Consensus 116 ~HT~edId~L~~~~L~~~~~ 135 (153)
.+|++|++++++ +|+.+.+
T Consensus 380 ~~t~~~i~~~~~-~l~~~~~ 398 (401)
T 2bwn_A 380 VHDLKQIDGLVH-AMDLLWA 398 (401)
T ss_dssp TSCHHHHHHHHH-HHHHHC-
T ss_pred CCCHHHHHHHHH-HHHHHHH
Confidence 999999999998 8876644
No 6
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=98.08 E-value=1.8e-05 Score=68.70 Aligned_cols=89 Identities=12% Similarity=0.004 Sum_probs=68.5
Q ss_pred cchHHHHHHHHHHHHHHHHHHhCC-CcccCC-CCCCeEEEEcCCch-----HHHhcc-------ccccCCCCCCCCceEE
Q psy5049 45 SGIRRISVLAHNTRYFRRKLNRLG-LIVYGH-RDSPVVPVLVFFFS-----KVGQTS-------IGLGVEQTALNDGLSL 110 (153)
Q Consensus 45 ~~~~rr~~L~~ni~~fr~~L~~~G-~~~~~~-s~SPIiPV~~g~~~-----~~~~~a-------~~i~~PtVP~g~~RlR 110 (153)
...+++++..++..+|.+.|.+.| +.+... +..|++.+.+.+.. ...+.. ....+|+++.+...+|
T Consensus 339 g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~p~~~~~~~~lR 418 (502)
T 3hbx_A 339 GYRNVMENCRENMIVLREGLEKTERFNIVSKDEGVPLVAFSLKDSSCHTEFEISDMLRRYGWIVPAYTMPPNAQHITVLR 418 (502)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTCEEECSCSSSSSEEEEEESSCSSCCHHHHHHHHHTTTCBCCEEECCTTCTTCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCCCceEEEEEecCCCcCCHHHHHHHHHhCCcEEeeccCCcccCCceEEE
Confidence 346788999999999999999987 766543 46899988875421 222222 3346788888999999
Q ss_pred EEeeCCCCHHHHHHHHHHHHHHHH
Q psy5049 111 YESSHLRSANLWNRPHSPSLMAVF 134 (153)
Q Consensus 111 I~lsA~HT~edId~L~~~~L~~~~ 134 (153)
|+++..+|+||++.+++ .|+.+.
T Consensus 419 isv~~~~t~edid~li~-~L~~~l 441 (502)
T 3hbx_A 419 VVIREDFSRTLAERLVI-DIEKVM 441 (502)
T ss_dssp EECCTTCCHHHHHHHHH-HHHHHH
T ss_pred EEeCCCCCHHHHHHHHH-HHHHHH
Confidence 99999999999999998 776544
No 7
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=98.05 E-value=1.3e-05 Score=69.03 Aligned_cols=90 Identities=6% Similarity=-0.206 Sum_probs=69.6
Q ss_pred cchHHHHHHHHHHHHHHHHHHhC-CCcccCCCCCCeEEEEcC-CchHHHhcc-------ccccCCCCCCCCceEEEEeeC
Q psy5049 45 SGIRRISVLAHNTRYFRRKLNRL-GLIVYGHRDSPVVPVLVF-FFSKVGQTS-------IGLGVEQTALNDGLSLYESSH 115 (153)
Q Consensus 45 ~~~~rr~~L~~ni~~fr~~L~~~-G~~~~~~s~SPIiPV~~g-~~~~~~~~a-------~~i~~PtVP~g~~RlRI~lsA 115 (153)
...+++++..+++++|++.|++. |+.+.....++|+.+.+. ++....++. .....|+++.|...+|+++++
T Consensus 370 g~~~~~~~~~~~a~~l~~~L~~~~g~~l~~~~~~~iv~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~ 449 (475)
T 3k40_A 370 NLQAHIRRHCNFAKQFGDLCVADSRFELAAEINMGLVCFRLKGSNERNEALLKRINGRGHIHLVPAKIKDVYFLRMAICS 449 (475)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSTTEEESSCCBTTEEEEEESSCHHHHHHHHHHHHHHTSCBCEEEEETTEEEEEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCceEEEEEEeCCchHHHHHHHHHHHhCCcEEEEeeEECCEEEEEEEeCC
Confidence 34778899999999999999987 887765566889888874 333333332 445678889999999999987
Q ss_pred CC-CHHHHHHHHHHHHHHHHh
Q psy5049 116 LR-SANLWNRPHSPSLMAVFR 135 (153)
Q Consensus 116 ~H-T~edId~L~~~~L~~~~~ 135 (153)
.+ |++||+++++ +++.+.+
T Consensus 450 ~~tt~~di~~~~~-~i~~~~~ 469 (475)
T 3k40_A 450 RFTQSEDMEYSWK-EVSAAAD 469 (475)
T ss_dssp TTCCHHHHHHHHH-HHHHHHH
T ss_pred CCCCHHHHHHHHH-HHHHHHH
Confidence 76 8999999998 7766553
No 8
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=97.97 E-value=2.5e-05 Score=67.26 Aligned_cols=89 Identities=8% Similarity=-0.069 Sum_probs=68.8
Q ss_pred chHHHHHHHHHHHHHHHHHHhC-CCcccCCCCCCeEEEEcCC-chHHHhcc-------ccccCCCCCCCCceEEEEeeCC
Q psy5049 46 GIRRISVLAHNTRYFRRKLNRL-GLIVYGHRDSPVVPVLVFF-FSKVGQTS-------IGLGVEQTALNDGLSLYESSHL 116 (153)
Q Consensus 46 ~~~rr~~L~~ni~~fr~~L~~~-G~~~~~~s~SPIiPV~~g~-~~~~~~~a-------~~i~~PtVP~g~~RlRI~lsA~ 116 (153)
..+++++..+++++|++.|++. |+.+.....++++.+.+.. +....++. ..+..|+++.|...+|+++++.
T Consensus 378 ~~~~~~~~~~~a~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~ 457 (481)
T 4e1o_A 378 LQAHVRHGTEMAKYFESLVRNDPSFEIPAKRHLGLVVFRLKGPNSLTENVLKEIAKAGRLFLIPATIQDKLIIRFTVTSQ 457 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCTTEECCSCCCSSEEEEEESSCHHHHHHHHHHHHHHCSSBCEEEEETTEEEEEEECCCT
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceeEEEEEeCCchHHHHHHHHHHHhCCeEEEEeeEECCEEEEEEEeCCC
Confidence 4678889999999999999987 8877655678898887743 33333332 3456688888999999999988
Q ss_pred C-CHHHHHHHHHHHHHHHHh
Q psy5049 117 R-SANLWNRPHSPSLMAVFR 135 (153)
Q Consensus 117 H-T~edId~L~~~~L~~~~~ 135 (153)
+ |++||+++++ +++.+.+
T Consensus 458 ~tt~~di~~~~~-~i~~~~~ 476 (481)
T 4e1o_A 458 FTTRDDILRDWN-LIRDAAT 476 (481)
T ss_dssp TCCHHHHHHHHH-HHHHHHH
T ss_pred CCCHHHHHHHHH-HHHHHHH
Confidence 7 8999999998 7766543
No 9
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=97.86 E-value=0.00014 Score=59.46 Aligned_cols=89 Identities=15% Similarity=0.136 Sum_probs=68.3
Q ss_pred chHHHHHHHHHHHHHHHHHHhCCCcccCCCCCCeEEEEcCCchHHHhcc----------ccccCCCCCCCCceEEEEeeC
Q psy5049 46 GIRRISVLAHNTRYFRRKLNRLGLIVYGHRDSPVVPVLVFFFSKVGQTS----------IGLGVEQTALNDGLSLYESSH 115 (153)
Q Consensus 46 ~~~rr~~L~~ni~~fr~~L~~~G~~~~~~s~SPIiPV~~g~~~~~~~~a----------~~i~~PtVP~g~~RlRI~lsA 115 (153)
.++.+++++++..++.+.|.+.|+.+. .+.++++.+-+.+.....++. .+..+|.+|.+...+||+++.
T Consensus 298 ~~~~~~~~~~~~~~l~~~L~~~g~~~~-~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~~~~~~~~~~iRi~~~~ 376 (401)
T 1fc4_A 298 GSELRDRLWANARQFREQMSAAGFTLA-GADHAIIPVMLGDAVVAQKFARELQKEGIYVTGFFYPVVPKGQARIRTQMSA 376 (401)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCCBC-CSSSSEEEEEEECHHHHHHHHHHHHHTTEECCEECTTSSCTTCEEEEEECCT
T ss_pred CHHHHHHHHHHHHHHHHHHHHcCCccc-CCCCCEEEEEcCChHHHHHHHHHHHHCCcEEeeecCCCCCCCCceEEEEeCC
Confidence 468899999999999999999898765 466788888776532222221 233566777777899999999
Q ss_pred CCCHHHHHHHHHHHHHHHHhc
Q psy5049 116 LRSANLWNRPHSPSLMAVFRG 136 (153)
Q Consensus 116 ~HT~edId~L~~~~L~~~~~~ 136 (153)
.+|++|++++++ +|+.+.+.
T Consensus 377 ~~~~~~i~~~~~-~l~~~~~~ 396 (401)
T 1fc4_A 377 AHTPEQITRAVE-AFTRIGKQ 396 (401)
T ss_dssp TCCHHHHHHHHH-HHHHHHHH
T ss_pred CCCHHHHHHHHH-HHHHHHHH
Confidence 999999999999 88776554
No 10
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=97.80 E-value=0.00017 Score=59.01 Aligned_cols=89 Identities=16% Similarity=0.184 Sum_probs=66.7
Q ss_pred chHHHHHHHHHHHHHHHHHHhCCCcccCCCCCCeEEEEcCCchHHHhcc----------ccccCCCCCCCCceEEEEeeC
Q psy5049 46 GIRRISVLAHNTRYFRRKLNRLGLIVYGHRDSPVVPVLVFFFSKVGQTS----------IGLGVEQTALNDGLSLYESSH 115 (153)
Q Consensus 46 ~~~rr~~L~~ni~~fr~~L~~~G~~~~~~s~SPIiPV~~g~~~~~~~~a----------~~i~~PtVP~g~~RlRI~lsA 115 (153)
..+++++++++..++.+.|++.|+.+. .+.++++.+.+.+.....++. .+..++.+|.+...+||+++.
T Consensus 293 ~~~~~~~~~~~~~~l~~~L~~~g~~~~-~~~g~~~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~~~~~~~~~~iRis~~~ 371 (398)
T 3a2b_A 293 EPEHIEKLWKNTDYAKAQLLDHGFDLG-ATESPILPIFIRSNEKTFWVTKMLQDDGVFVNPVVSPAVPAEESLIRFSLMA 371 (398)
T ss_dssp CTHHHHHHHHHHHHHHHHHHHTTCCBC-SCCSSEEEEECCCHHHHHHHHHHHHHTTEECEEECTTTSCGGGCEEEEECCT
T ss_pred CHHHHHHHHHHHHHHHHHHHhcCCCcC-CCCCCEEEEEcCCHHHHHHHHHHHHHCCcEEEeeCCCCCCCCCceEEEEEeC
Confidence 357899999999999999999898764 356789988886532222221 223445556667889999999
Q ss_pred CCCHHHHHHHHHHHHHHHHhc
Q psy5049 116 LRSANLWNRPHSPSLMAVFRG 136 (153)
Q Consensus 116 ~HT~edId~L~~~~L~~~~~~ 136 (153)
.+|++|++++++ +|+.+.+.
T Consensus 372 ~~~~e~i~~~~~-~l~~~l~~ 391 (398)
T 3a2b_A 372 THTYDQIDEAIE-KMVKVFKQ 391 (398)
T ss_dssp TCCHHHHHHHHH-HHHHHHHH
T ss_pred CCCHHHHHHHHH-HHHHHHHH
Confidence 999999999999 77765543
No 11
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=97.66 E-value=0.00013 Score=59.29 Aligned_cols=85 Identities=15% Similarity=0.030 Sum_probs=63.9
Q ss_pred hHHHHHHHHHHHHHHHHHHhCCCcccCCCCCCeEEEEcCCchHHHhcc----------ccccCCCCCCCCceEEEEeeCC
Q psy5049 47 IRRISVLAHNTRYFRRKLNRLGLIVYGHRDSPVVPVLVFFFSKVGQTS----------IGLGVEQTALNDGLSLYESSHL 116 (153)
Q Consensus 47 ~~rr~~L~~ni~~fr~~L~~~G~~~~~~s~SPIiPV~~g~~~~~~~~a----------~~i~~PtVP~g~~RlRI~lsA~ 116 (153)
++.+++++++..++.+.|.+.|+.+. .+.++++.+.+.+.....++. .+..+|.+|.+...+||+++..
T Consensus 289 ~~~~~~~~~~~~~l~~~L~~~g~~~~-~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~~~~~~~~~~~Ri~~~~~ 367 (384)
T 1bs0_A 289 DARREKLAALITRFRAGVQDLPFTLA-DSCSAIQPLIVGDNSRALQLAEKLRQQGCWVTAIRPPTVPAGTARLRLTLTAA 367 (384)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSSCEEC-SCCSSBCCEEEESHHHHHHHHHHHHHTTEECCEECTTSSCTTCEEECCBCCTT
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCccc-CCCCCEEEEEeCCHHHHHHHHHHHHHCCcEEEeecCCCCCCCCceEEEEEcCC
Confidence 57889999999999999999998764 356788777775422222221 3335566677788999999999
Q ss_pred CCHHHHHHHHHHHHHHH
Q psy5049 117 RSANLWNRPHSPSLMAV 133 (153)
Q Consensus 117 HT~edId~L~~~~L~~~ 133 (153)
+|++|++++++ +|+.+
T Consensus 368 ~~~~~i~~~~~-~l~~~ 383 (384)
T 1bs0_A 368 HEMQDIDRLLE-VLHGN 383 (384)
T ss_dssp CCHHHHHHHHH-HHHHH
T ss_pred CCHHHHHHHHH-HHHhh
Confidence 99999999888 76543
No 12
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=97.48 E-value=0.00059 Score=59.83 Aligned_cols=86 Identities=15% Similarity=0.000 Sum_probs=61.8
Q ss_pred chHHHHHHHHHHHHHHHHHHhCCCccc-CCCCCCeEEEEcCCc----hHHHhcc----c--------cccCCCCCCCCce
Q psy5049 46 GIRRISVLAHNTRYFRRKLNRLGLIVY-GHRDSPVVPVLVFFF----SKVGQTS----I--------GLGVEQTALNDGL 108 (153)
Q Consensus 46 ~~~rr~~L~~ni~~fr~~L~~~G~~~~-~~s~SPIiPV~~g~~----~~~~~~a----~--------~i~~PtVP~g~~R 108 (153)
.+++++++++|+++|++.|.+.|+.+. +.+++++++|-+++. ..+.+.. + ..++|.+ .++
T Consensus 333 ~~~~~~~~~~na~~L~~~L~~~G~~v~~~~t~t~lv~vdl~~~g~~~~~~~~~L~~~GI~v~~~~~p~d~~p~~---~~~ 409 (490)
T 2a7v_A 333 FREYSLQVLKNARAMADALLERGYSLVSGGTDNHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAIT---PGG 409 (490)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEECTTTTCCHHHHHHHHHHTTEECEEECCTTCCCSSS---CSE
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCcEEecCCCCCeEEEEEeCCCCCCHHHHHHHHHhCCeEEecCccCCCCCCCC---CCc
Confidence 367889999999999999999999764 235689999988643 2222222 1 1234554 478
Q ss_pred EEEEeeC----CCCHHHHHHHHHHHHHHHHh
Q psy5049 109 SLYESSH----LRSANLWNRPHSPSLMAVFR 135 (153)
Q Consensus 109 lRI~lsA----~HT~edId~L~~~~L~~~~~ 135 (153)
+|+...| .++++|++++++ ++..+..
T Consensus 410 iRig~~a~t~~g~~~~d~~~~~~-~i~~~l~ 439 (490)
T 2a7v_A 410 LRLGAPALTSRQFREDDFRRVVD-FIDEGVN 439 (490)
T ss_dssp EEEESHHHHHTTCCHHHHHHHHH-HHHHHHH
T ss_pred eEecccccccCCCCHHHHHHHHH-HHHHHHH
Confidence 9997644 789999999988 7755543
No 13
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=97.46 E-value=0.00092 Score=53.94 Aligned_cols=87 Identities=6% Similarity=-0.159 Sum_probs=60.2
Q ss_pred hHHHHHHHHHHHHHHHHHHhCC-C-cccCC---CCCCeEEEEcCCchHHHhcc------ccccCCCCCCCCceEEEEeeC
Q psy5049 47 IRRISVLAHNTRYFRRKLNRLG-L-IVYGH---RDSPVVPVLVFFFSKVGQTS------IGLGVEQTALNDGLSLYESSH 115 (153)
Q Consensus 47 ~~rr~~L~~ni~~fr~~L~~~G-~-~~~~~---s~SPIiPV~~g~~~~~~~~a------~~i~~PtVP~g~~RlRI~lsA 115 (153)
++++++.+++..++.+.|.+.| + .+... ...+++++.+++.....++. ..+..|..+. .+.+||+++.
T Consensus 262 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gi~~~~g~~~-~~~iRis~~~ 340 (362)
T 2c0r_A 262 EGVQQANRKKASLIYDAIDQSGGFYRGCVDVDSRSDMNITFRLASEELEKEFVKASEQEGFVGLKGHRS-VGGLRASIYN 340 (362)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSTTSSEESSCGGGBCSSEEEEECSCHHHHHHHHHHHHHTTEESCBCCTT-TCSEEEECCT
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCccccCCChHHcCCcEEEEEcCCcchHHHHHHHHHHCCCeeccCCCC-CCEEEEECCC
Confidence 7789999999999999999988 6 54221 13568888776532222222 1122343222 3579999999
Q ss_pred CCCHHHHHHHHHHHHHHHHh
Q psy5049 116 LRSANLWNRPHSPSLMAVFR 135 (153)
Q Consensus 116 ~HT~edId~L~~~~L~~~~~ 135 (153)
.+|+||++++++ +|+.+.+
T Consensus 341 ~~~~e~i~~l~~-~l~~~~~ 359 (362)
T 2c0r_A 341 AVPYESCEALVQ-FMEHFKR 359 (362)
T ss_dssp TSCHHHHHHHHH-HHHHHHH
T ss_pred CCCHHHHHHHHH-HHHHHHH
Confidence 999999999999 8876643
No 14
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=97.40 E-value=0.00094 Score=53.09 Aligned_cols=88 Identities=11% Similarity=-0.052 Sum_probs=60.8
Q ss_pred hHHHHHHHHHHHHHHHHHHhCCCcccCC--CCCC-eEEEEcCC-----chHHHhcc---ccccCCCCCCCCceEEEEeeC
Q psy5049 47 IRRISVLAHNTRYFRRKLNRLGLIVYGH--RDSP-VVPVLVFF-----FSKVGQTS---IGLGVEQTALNDGLSLYESSH 115 (153)
Q Consensus 47 ~~rr~~L~~ni~~fr~~L~~~G~~~~~~--s~SP-IiPV~~g~-----~~~~~~~a---~~i~~PtVP~g~~RlRI~lsA 115 (153)
++.+++++++..++++.|.+.|+.+... +.++ ++.+.+.+ .....+.. .....|..+.+...+|++++.
T Consensus 265 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~iRi~~~~ 344 (366)
T 1m32_A 265 AARHQRYQQNQRSLVAGMRALGFNTLLDDELHSPIITAFYSPEDPQYRFSEFYRRLKEQGFVIYPGKVSQSDCFRIGNIG 344 (366)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCBSSCGGGBCSSEEEEECCCCTTCCHHHHHHHHHHTTEECEECCCSSSCEEEEECCS
T ss_pred hHHHHHHHHHHHHHHHHHHHCCCeeccCchhcCceEEEEEcCccCCCCHHHHHHHHHHCCEEEECCcCCCCCEEEEecCC
Confidence 5688999999999999999888876432 1356 66666653 22222222 222233333367899999999
Q ss_pred CCCHHHHHHHHHHHHHHHHh
Q psy5049 116 LRSANLWNRPHSPSLMAVFR 135 (153)
Q Consensus 116 ~HT~edId~L~~~~L~~~~~ 135 (153)
.+|++|++++++ +|+.+.+
T Consensus 345 ~~~~~~i~~~~~-~l~~~~~ 363 (366)
T 1m32_A 345 EVYAADITALLT-AIRTAMY 363 (366)
T ss_dssp SCCHHHHHHHHH-HHHHHCT
T ss_pred CCCHHHHHHHHH-HHHHHHH
Confidence 999999999998 7776643
No 15
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=97.40 E-value=0.00056 Score=58.55 Aligned_cols=89 Identities=7% Similarity=-0.116 Sum_probs=65.5
Q ss_pred chHHHHHHHHHHHHHHHHHHhC-CCcccCCCCCCeEEEEcCCch--------HHHhcc----ccccCCCCCCCCceEEEE
Q psy5049 46 GIRRISVLAHNTRYFRRKLNRL-GLIVYGHRDSPVVPVLVFFFS--------KVGQTS----IGLGVEQTALNDGLSLYE 112 (153)
Q Consensus 46 ~~~rr~~L~~ni~~fr~~L~~~-G~~~~~~s~SPIiPV~~g~~~--------~~~~~a----~~i~~PtVP~g~~RlRI~ 112 (153)
..++.+++.++..+|.+.|++. |+.+.+.+.++++.+.+.+.. ...... ..+..+++..|...+||+
T Consensus 392 ~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~l~~~l~~~G~~~~~~~~~~g~~~lRis 471 (497)
T 2qma_A 392 LGDMYDHLLAQTLEVADMIRTNDQFELLAEPSLSTVLFRATHETADLDELNKALRLEALTRGIAVLGETIVDGKTALKFT 471 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCTTEEECSCCSSSEEEEEECCSSSCHHHHHHHHHHHHHHHTSCBCEEEEETTEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCCeEEEcCCCceEEEEEEcCCccCHHHHHHHHHHHHHhCCCEEEEeeEECCEEEEEEE
Confidence 3567888999999999999986 776644566788888775431 111111 444556666778899999
Q ss_pred e-eCCCCHHHHHHHHHHHHHHHHh
Q psy5049 113 S-SHLRSANLWNRPHSPSLMAVFR 135 (153)
Q Consensus 113 l-sA~HT~edId~L~~~~L~~~~~ 135 (153)
+ +..+|++||+++++ .++.+.+
T Consensus 472 ~~~~~~t~edi~~~~~-~l~~~~~ 494 (497)
T 2qma_A 472 ILNPCLTTSDFESLLS-KINMLAV 494 (497)
T ss_dssp CCCTTCCHHHHHHHHH-HHHHHHH
T ss_pred ecCCCCCHHHHHHHHH-HHHHHHH
Confidence 8 89999999999998 7766543
No 16
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=97.38 E-value=0.00076 Score=53.60 Aligned_cols=90 Identities=10% Similarity=-0.041 Sum_probs=62.6
Q ss_pred chHHHHHHHHHHHHHHHHHHhCCCcccCCC-CCCeEEEEcCC---chHHHhcc----ccccCCCCCCCCceEEEEeeCCC
Q psy5049 46 GIRRISVLAHNTRYFRRKLNRLGLIVYGHR-DSPVVPVLVFF---FSKVGQTS----IGLGVEQTALNDGLSLYESSHLR 117 (153)
Q Consensus 46 ~~~rr~~L~~ni~~fr~~L~~~G~~~~~~s-~SPIiPV~~g~---~~~~~~~a----~~i~~PtVP~g~~RlRI~lsA~H 117 (153)
.++.+++++++..++.+.|++.|+.+.... ...++.+.+.+ .....+.. +.+++-..+.+...+||+++..+
T Consensus 250 ~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~iRi~~~~~~ 329 (352)
T 1iug_A 250 LEEHLALKAWQNALLYGVGEEGGLRPVPKRFSPAVAAFYLPEGVPYARVKEAFAQRGAVIAGGQGPLKGKVFRLSLMGAY 329 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCEESCSSBCTTCEEEECCTTCCHHHHHHHHHTTTEECEECCGGGTTTEEEECCCSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCcccccccCCeEEEEEcCCCCCHHHHHHHHHHCCEEEEeCCCccCCCEEEEEccccC
Confidence 357889999999999999998888764321 35688887752 22222222 22222222345678999999999
Q ss_pred CHHHHHHHHHHHHHHHHhc
Q psy5049 118 SANLWNRPHSPSLMAVFRG 136 (153)
Q Consensus 118 T~edId~L~~~~L~~~~~~ 136 (153)
|++|++++++ +|+.+.+.
T Consensus 330 ~~~~i~~~~~-~l~~~~~~ 347 (352)
T 1iug_A 330 DRYEALGVAG-MFREVLEE 347 (352)
T ss_dssp CHHHHHHHHH-HHHHHHHH
T ss_pred CHHHHHHHHH-HHHHHHHH
Confidence 9999999999 88766544
No 17
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=97.35 E-value=0.00041 Score=60.26 Aligned_cols=89 Identities=8% Similarity=-0.075 Sum_probs=61.9
Q ss_pred chHHHHHHHHHHHHHHHHHHhC-CCcccC--CCCCCeEEEEcCCch-------------------HHHhcc-----cccc
Q psy5049 46 GIRRISVLAHNTRYFRRKLNRL-GLIVYG--HRDSPVVPVLVFFFS-------------------KVGQTS-----IGLG 98 (153)
Q Consensus 46 ~~~rr~~L~~ni~~fr~~L~~~-G~~~~~--~s~SPIiPV~~g~~~-------------------~~~~~a-----~~i~ 98 (153)
..++++++.+++++|++.|++. |+.+.. .+..+++.+.+.... ...+.. ..+.
T Consensus 387 l~~~~~~~~~~a~~l~~~L~~~pg~~l~~~~~p~~~~v~f~~~p~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~G~~~~~ 466 (511)
T 3vp6_A 387 FENQINKCLELAEYLYAKIKNREEFEMVFNGEPEHTNVCFWYIPQSLRGVPDSPQRREKLHKVAPKIKALMMESGTTMVG 466 (511)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCTTEEESSSSCCSSSCEEEEECCGGGSSCCCCHHHHHHHHHHHHHHHHHHHHHTSCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCEEEEecCCCCeEEEEEEEeCccccccccchhHHHHHHHHHHHHHHHHHhcCCEEEE
Confidence 3778999999999999999986 887754 355777666543221 111111 2334
Q ss_pred CCCCCCCCceEEEEe-eCCCCHHHHHHHHHHHHHHHHh
Q psy5049 99 VEQTALNDGLSLYES-SHLRSANLWNRPHSPSLMAVFR 135 (153)
Q Consensus 99 ~PtVP~g~~RlRI~l-sA~HT~edId~L~~~~L~~~~~ 135 (153)
++.++.+...+|+++ +..+|++||+++++ +++.+.+
T Consensus 467 ~~~~~~~~~~lRi~~~~~~~t~~di~~ll~-~i~~~~~ 503 (511)
T 3vp6_A 467 YQPQGDKANFFRMVISNPAATQSDIDFLIE-EIERLGQ 503 (511)
T ss_dssp EEEETTEEEEEEECCCCTTCCHHHHHHHHH-HHHHHHC
T ss_pred EEEeCCceEEEEEEecCCCCCHHHHHHHHH-HHHHHHH
Confidence 555555556799999 89999999999988 7766554
No 18
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=97.31 E-value=0.001 Score=56.11 Aligned_cols=88 Identities=8% Similarity=-0.053 Sum_probs=62.2
Q ss_pred chHHHHHHHHHHHHHHHHHHhCC-CcccCC----CCCCeEEEEcCCc-------hHHHhcc----c---cccCCCCCCCC
Q psy5049 46 GIRRISVLAHNTRYFRRKLNRLG-LIVYGH----RDSPVVPVLVFFF-------SKVGQTS----I---GLGVEQTALND 106 (153)
Q Consensus 46 ~~~rr~~L~~ni~~fr~~L~~~G-~~~~~~----s~SPIiPV~~g~~-------~~~~~~a----~---~i~~PtVP~g~ 106 (153)
..+++++..++..++.+.|.+.+ +.+... +..+++.+.+.+. ....+.. . ....|+...+.
T Consensus 325 ~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~ 404 (452)
T 2dgk_A 325 YTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCFKLKDGEDPGYTLYDLSERLRLRGWQVPAFTLGGEATDI 404 (452)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTSSEEEEEECCTTTBSSEEEEEECTTCCCSCCHHHHHHHHHHTTCBCCEEECSTTCTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCeEEecCCCCCCCeEEEEEEecCcccccCCHHHHHHHHHhcCCeeeeeeCCcccCCe
Confidence 35678889999999999999875 665422 3467888777542 2222221 2 22345555567
Q ss_pred ceEEEEeeCCCCHHHHHHHHHHHHHHHH
Q psy5049 107 GLSLYESSHLRSANLWNRPHSPSLMAVF 134 (153)
Q Consensus 107 ~RlRI~lsA~HT~edId~L~~~~L~~~~ 134 (153)
..+||+++..+|+||+|++++ +|+.+.
T Consensus 405 ~~lRis~~~~~t~e~id~li~-~l~~~~ 431 (452)
T 2dgk_A 405 VVMRIMCRRGFEMDFAELLLE-DYKASL 431 (452)
T ss_dssp EEEEEECCTTCCHHHHHHHHH-HHHHHH
T ss_pred EEEEEEecCCCCHHHHHHHHH-HHHHHH
Confidence 899999999999999999999 776554
No 19
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=97.30 E-value=0.0015 Score=52.58 Aligned_cols=88 Identities=10% Similarity=0.069 Sum_probs=60.9
Q ss_pred hHHHHHHHHHHHHHHHHHHhCCCcccCCC---CCCeEEEEcCC---chHHHhcc----ccccCCCCCCCCceEEEEeeCC
Q psy5049 47 IRRISVLAHNTRYFRRKLNRLGLIVYGHR---DSPVVPVLVFF---FSKVGQTS----IGLGVEQTALNDGLSLYESSHL 116 (153)
Q Consensus 47 ~~rr~~L~~ni~~fr~~L~~~G~~~~~~s---~SPIiPV~~g~---~~~~~~~a----~~i~~PtVP~g~~RlRI~lsA~ 116 (153)
++++++++++..++.+.|.+.|+.+.... .++++.+.+.+ .....+.. +.+.+-..+.+...+||+++..
T Consensus 280 ~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~iRi~~~~~ 359 (386)
T 2dr1_A 280 EKWLEMYEKRAKMVREGVREIGLDILAEPGHESPTITAVLTPPGIKGDEVYEAMRKRGFELAKGYGSVKEKTFRIGHMGY 359 (386)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCBSSCTTCBCSSEEEEECCTTCCHHHHHHHHHHTTEECEECCGGGTTTEEEEECCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCeeCcCccccCCceEEEEcCCCCCHHHHHHHHHHCCeEEecCccccCCCEEEEECCCC
Confidence 57899999999999999998888764321 35788887753 22222222 2222211223457899999999
Q ss_pred CCHHHHHHHHHHHHHHHHh
Q psy5049 117 RSANLWNRPHSPSLMAVFR 135 (153)
Q Consensus 117 HT~edId~L~~~~L~~~~~ 135 (153)
+|++|++++++ +|+.+.+
T Consensus 360 ~~~~~i~~~~~-~l~~~~~ 377 (386)
T 2dr1_A 360 MKFEDIQEMLD-NLREVIN 377 (386)
T ss_dssp CCHHHHHHHHH-HHHHHHH
T ss_pred CCHHHHHHHHH-HHHHHHH
Confidence 99999999998 7766543
No 20
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=97.25 E-value=0.0025 Score=51.02 Aligned_cols=86 Identities=10% Similarity=-0.070 Sum_probs=61.4
Q ss_pred cchHHHHHHHHHHHHHHHHHHhCCCcccCCCCCCeEEEEcCCchHHHhcc--ccc-cCCCCCCCCceEEEEeeCCCCHHH
Q psy5049 45 SGIRRISVLAHNTRYFRRKLNRLGLIVYGHRDSPVVPVLVFFFSKVGQTS--IGL-GVEQTALNDGLSLYESSHLRSANL 121 (153)
Q Consensus 45 ~~~~rr~~L~~ni~~fr~~L~~~G~~~~~~s~SPIiPV~~g~~~~~~~~a--~~i-~~PtVP~g~~RlRI~lsA~HT~ed 121 (153)
...+++++++++..++.+.|++.|+.+...+.++++-+.+.+.....+.. ..| ..|.- ....+||+++..+|+||
T Consensus 306 ~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~--~~~~~Ri~~~~~~~~e~ 383 (397)
T 3f9t_A 306 GQRKIVNECMENTLYLYKKLKENNFKPVIEPILNIVAIEDEDYKEVCKKLRDRGIYVSVCN--CVKALRIVVMPHIKREH 383 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCCBSSCCSSSEEEEECTTHHHHHHHHHHTTCBCEECS--SSSEEEEECCTTCCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCEEEcCCCccEEEEEeCCHHHHHHHHHhCCeEEeccC--CCCEEEEEEcCCCCHHH
Confidence 34678889999999999999999987545566787766665533333332 222 22221 13789999999999999
Q ss_pred HHHHHHHHHHHH
Q psy5049 122 WNRPHSPSLMAV 133 (153)
Q Consensus 122 Id~L~~~~L~~~ 133 (153)
++++++ +|+.+
T Consensus 384 i~~~~~-~l~~~ 394 (397)
T 3f9t_A 384 IDNFIE-ILNSI 394 (397)
T ss_dssp HHHHHH-HHHHH
T ss_pred HHHHHH-HHHHh
Confidence 999988 77654
No 21
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=97.21 E-value=0.0012 Score=52.42 Aligned_cols=87 Identities=5% Similarity=-0.070 Sum_probs=60.8
Q ss_pred chHHHHHHHHHHHHHHHHHHhC-CCcccCC----CCCCeEEEEcCC-chHHHhcc----ccccCCCCCCCCceEEEEeeC
Q psy5049 46 GIRRISVLAHNTRYFRRKLNRL-GLIVYGH----RDSPVVPVLVFF-FSKVGQTS----IGLGVEQTALNDGLSLYESSH 115 (153)
Q Consensus 46 ~~~rr~~L~~ni~~fr~~L~~~-G~~~~~~----s~SPIiPV~~g~-~~~~~~~a----~~i~~PtVP~g~~RlRI~lsA 115 (153)
.++++++++++..++.+.|.+. |+.+... ....++.+.+.+ .....+.. +.+++-..+.+...+||+++.
T Consensus 264 ~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~g~~~~~~~~iRis~~~ 343 (362)
T 3ffr_A 264 ADGIRKQTEEKAALINTYIESSKVFSFGVEDAKLRSMTTIVANTTMLPGEINKILEPFDMAVGAGYGSKKETQIRIANFP 343 (362)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCSSEEESSSCGGGBCSSEEEEEESSCHHHHHHHHGGGTEEEEECSGGGTTTEEEEECCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHccCceeccCChhhcCCceEEEecCCCHHHHHHHHHHCCeEEecCccccCCCEEEEECCC
Confidence 3678899999999999999998 7765331 125677777664 23333222 333322224456889999999
Q ss_pred CCCHHHHHHHHHHHHHHH
Q psy5049 116 LRSANLWNRPHSPSLMAV 133 (153)
Q Consensus 116 ~HT~edId~L~~~~L~~~ 133 (153)
.+|+||++++++ +|+.+
T Consensus 344 ~~~~e~i~~l~~-~l~~~ 360 (362)
T 3ffr_A 344 AHSLEQVHKLVQ-TLKEK 360 (362)
T ss_dssp TSCHHHHHHHHH-HHHHH
T ss_pred CCCHHHHHHHHH-HHHHH
Confidence 999999999998 77665
No 22
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=97.13 E-value=0.0038 Score=50.36 Aligned_cols=85 Identities=9% Similarity=-0.029 Sum_probs=60.5
Q ss_pred hHHHHHHHHHHHHHHHHHHhCCCcccCCCCCCeEEEEcCC--chHHHhcc----ccccCCCCCCCCceEEEEeeCCCCHH
Q psy5049 47 IRRISVLAHNTRYFRRKLNRLGLIVYGHRDSPVVPVLVFF--FSKVGQTS----IGLGVEQTALNDGLSLYESSHLRSAN 120 (153)
Q Consensus 47 ~~rr~~L~~ni~~fr~~L~~~G~~~~~~s~SPIiPV~~g~--~~~~~~~a----~~i~~PtVP~g~~RlRI~lsA~HT~e 120 (153)
.+++++++++..++.+.|.+.|+.+. .+.+..+.+.+.+ .....+.. +.+++-..+.+...+||+++ |++
T Consensus 264 ~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~~~~~~~iRis~~---~~~ 339 (360)
T 3hdo_A 264 SECCRRIRETREWFTTELRSIGYDVI-PSQGNYLFATPPDRDGKRVYDGLYARKVLVRHFSDPLLAHGMRISIG---TRE 339 (360)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCEEC-CCSSSEEEEECTTCCHHHHHHHHHHTTEECBCCCSTTTTTSEEEECC---CHH
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCEEc-CCCccEEEEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCEEEEEcC---CHH
Confidence 67888999999999999999888764 4667777776653 22322222 22322222556789999987 999
Q ss_pred HHHHHHHHHHHHHHhc
Q psy5049 121 LWNRPHSPSLMAVFRG 136 (153)
Q Consensus 121 dId~L~~~~L~~~~~~ 136 (153)
|+|++++ +|+.+.+.
T Consensus 340 e~~~l~~-al~~~~~~ 354 (360)
T 3hdo_A 340 EMEQTLA-ALKEIGEG 354 (360)
T ss_dssp HHHHHHH-HHHHHHC-
T ss_pred HHHHHHH-HHHHHhcc
Confidence 9999999 88887764
No 23
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=97.11 E-value=0.00016 Score=58.81 Aligned_cols=115 Identities=10% Similarity=-0.081 Sum_probs=62.4
Q ss_pred HHHHHHhHHHHHHHhhhcccEEeecCCCCCCCCcccccccccchHHHHHHHHHHHHHHHHHHhCCCcccCCCCCCeEEEE
Q psy5049 4 ISVLAQNTRYFRRKLNRLGLILYVLFQAQTKPPRSHCICFISGIRRISVLAHNTRYFRRKLNRLGLIVYGHRDSPVVPVL 83 (153)
Q Consensus 4 ~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~p~~~~~l~~~~~~~rr~~L~~ni~~fr~~L~~~G~~~~~~s~SPIiPV~ 83 (153)
.++..++.+|+++.|.++|+.+.+......+.+..-.+... ....+.+.|.+.|+.+......| +.
T Consensus 250 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~l~~~L~~~gI~v~~~~~~~---~~ 315 (373)
T 3frk_A 250 NEERRKIAQKYIAGINNPNVIIPVEADYAKHVWYTFVIRSE-----------KRDELQKYLNNNGIGTLIHYPIP---IH 315 (373)
T ss_dssp HHHHHHHHHHHHHHCCCTTEECCCCCTTEECCCSSEEEEES-----------SHHHHHHHHHHTTBCCBCSCSSC---GG
T ss_pred HHHHHHHHHHHHHHhccCceEeccCCCCCceeeEEEEEEeC-----------CHHHHHHHHHHCCCCcccCcCCc---cc
Confidence 56778899999999999996553321111111111111111 12346677777887652111112 11
Q ss_pred cCCchHHHhcc--ccccCCCCCCCCceEEEEeeCCCCHHHHHHHHHHHHHHHHh
Q psy5049 84 VFFFSKVGQTS--IGLGVEQTALNDGLSLYESSHLRSANLWNRPHSPSLMAVFR 135 (153)
Q Consensus 84 ~g~~~~~~~~a--~~i~~PtVP~g~~RlRI~lsA~HT~edId~L~~~~L~~~~~ 135 (153)
.. .....+. ....+++.+..+..+|++++..+|+||||++++ +++++..
T Consensus 316 ~~--~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~~di~~~~~-~l~~~~~ 366 (373)
T 3frk_A 316 LQ--QAYKDLGFKTGNFPIAEKIANEILSIPIWYGMKNEEIEYVID-KINAWKL 366 (373)
T ss_dssp GS--GGGGGGCCCTTSSHHHHHHHHHEEEECCCTTCCHHHHHHHHH-HHHTCC-
T ss_pred cC--hHHHhcCCCCCCCHHHHHHHhCEEEccCCCCCCHHHHHHHHH-HHHHHhh
Confidence 10 0000010 111122334455899999999999999999998 7776543
No 24
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=97.09 E-value=0.0033 Score=51.60 Aligned_cols=88 Identities=8% Similarity=-0.187 Sum_probs=61.6
Q ss_pred chHHHHHHHHHHHHHHHHHHhC-CCcccC--C-CCCC-eEEEEcCC---chHHHhcc----ccccCCCCCCCCceEEEEe
Q psy5049 46 GIRRISVLAHNTRYFRRKLNRL-GLIVYG--H-RDSP-VVPVLVFF---FSKVGQTS----IGLGVEQTALNDGLSLYES 113 (153)
Q Consensus 46 ~~~rr~~L~~ni~~fr~~L~~~-G~~~~~--~-s~SP-IiPV~~g~---~~~~~~~a----~~i~~PtVP~g~~RlRI~l 113 (153)
.++.+++..++..++.+.|.+. |+.+.. . +.++ ++.+.+.+ .....+.. +.++++..+.+...+||++
T Consensus 296 ~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~iRis~ 375 (398)
T 2fyf_A 296 LDWAVKRTADSSQRLYSWAQERPYTTPFVTDPGLRSQVVGTIDFVDDVDAGTVAKILRANGIVDTEPYRKLGRNQLRVAM 375 (398)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSTTEEESCCSGGGBCSSEEEEEECTTSCHHHHHHHHHHTTCBCCSCCTTTCSSEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCceeccCChhhcCCcEEEEECCCCCCHHHHHHHHHHCCcEEecCcccCCCCEEEEEe
Confidence 3667889999999999999988 776542 1 1367 88887743 22332222 4444433334567899999
Q ss_pred eCCCCHHHHHHHHHHHHHHHH
Q psy5049 114 SHLRSANLWNRPHSPSLMAVF 134 (153)
Q Consensus 114 sA~HT~edId~L~~~~L~~~~ 134 (153)
+..+|+||++++++ +|+.+.
T Consensus 376 ~~~~t~e~i~~~~~-~l~~~l 395 (398)
T 2fyf_A 376 FPAVEPDDVSALTE-CVDWVV 395 (398)
T ss_dssp CTTSCHHHHHHHHH-HHHHHH
T ss_pred cCCCCHHHHHHHHH-HHHHHH
Confidence 99999999999998 777654
No 25
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=97.05 E-value=0.0029 Score=51.49 Aligned_cols=92 Identities=14% Similarity=0.027 Sum_probs=63.5
Q ss_pred chHHHHHHHHHHHHHHHHHHhCCCcccCCCC---CCeEEEEcCC---chHHHhcc-----ccccCCCCCCCCceEEEEee
Q psy5049 46 GIRRISVLAHNTRYFRRKLNRLGLIVYGHRD---SPVVPVLVFF---FSKVGQTS-----IGLGVEQTALNDGLSLYESS 114 (153)
Q Consensus 46 ~~~rr~~L~~ni~~fr~~L~~~G~~~~~~s~---SPIiPV~~g~---~~~~~~~a-----~~i~~PtVP~g~~RlRI~ls 114 (153)
.++.++++.++..++.+.|.+.|+.+..... ..++.+.+.+ .....+.. +.+++-.-+.+...+||+++
T Consensus 288 ~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gi~v~~g~~~~~~~~iRi~~~ 367 (416)
T 3isl_A 288 LETRFERHRHHEAALAAGIKAMGLRLFGDDSCKMPVVTCVEIPGGIDGESVRDMLLAQFGIEIASSFGPLAGKIWRIGTM 367 (416)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCBCSCGGGBCTTEEEEECCTTCCHHHHHHHHHHHHCEECBCCCSTTTTTEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCEeccCccccCCcEEEEeCCCCCCHHHHHHHHHHhCCEEEecCCCCCCCCEEEEecc
Confidence 3688899999999999999998887643221 4577777742 22222211 33333223456789999999
Q ss_pred CCCCHHH-HHHHHHHHHHHHHhcCC
Q psy5049 115 HLRSANL-WNRPHSPSLMAVFRGGG 138 (153)
Q Consensus 115 A~HT~ed-Id~L~~~~L~~~~~~~~ 138 (153)
..+|++| ++++++ +|+.+.+..+
T Consensus 368 ~~~~~~e~i~~~~~-~l~~~~~~~~ 391 (416)
T 3isl_A 368 GYSCRKENVLFVLA-GLEAVLLRHN 391 (416)
T ss_dssp GGGCSHHHHHHHHH-HHHHHHHHTT
T ss_pred cCCCcHHHHHHHHH-HHHHHHHHcC
Confidence 9888888 999999 8877765543
No 26
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=97.01 E-value=0.0025 Score=50.36 Aligned_cols=89 Identities=8% Similarity=-0.105 Sum_probs=59.6
Q ss_pred chHHHHHHHHHHHHHHHHHHhCCCcccCCC--CCCeEEEEcCC---chHHHhcc----ccccCCCCCCCCceEEEEeeCC
Q psy5049 46 GIRRISVLAHNTRYFRRKLNRLGLIVYGHR--DSPVVPVLVFF---FSKVGQTS----IGLGVEQTALNDGLSLYESSHL 116 (153)
Q Consensus 46 ~~~rr~~L~~ni~~fr~~L~~~G~~~~~~s--~SPIiPV~~g~---~~~~~~~a----~~i~~PtVP~g~~RlRI~lsA~ 116 (153)
.++.+++++++..++++.|++.|+.+.... ...++.+.+.+ .....+.. +.+++-..+.+...+|+++++.
T Consensus 253 ~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~iRi~~~~~ 332 (353)
T 2yrr_A 253 VAARERRAREVYAWVLEELKARGFRPYPKASPLPTVLVVRPPEGVDADRLVRALYAEGVAVAGGIGPTRGQVLRLGLMGE 332 (353)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCEESCSSSBCTTEEEEECCTTCCHHHHHHHHHHTTEECEECCGGGTTTCEEEECSGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCccccCccCCCeEEEEECCCCCCHHHHHHHHHHCCEEEeCCccccCCCeEEEecCcc
Confidence 356789999999999999998888764322 34566676642 22232222 2222211123457899999999
Q ss_pred CCHHHHH-HHHHHHHHHHHh
Q psy5049 117 RSANLWN-RPHSPSLMAVFR 135 (153)
Q Consensus 117 HT~edId-~L~~~~L~~~~~ 135 (153)
+|++|++ ++++ +|+.+.+
T Consensus 333 ~~~~~~~~~~~~-~l~~~l~ 351 (353)
T 2yrr_A 333 GARREAYQAFLK-ALDRALA 351 (353)
T ss_dssp GSCHHHHHHHHH-HHHHHHH
T ss_pred CCHHHHHHHHHH-HHHHHHh
Confidence 9999999 9988 7776543
No 27
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=96.98 E-value=0.0021 Score=53.58 Aligned_cols=89 Identities=15% Similarity=0.072 Sum_probs=60.2
Q ss_pred chHHHHHHHHHHHHHHHHHHhCCCcccCCCCCCeEEEEcC--CchHHHh-cc----ccccCCC--CCCCCceEEEEeeCC
Q psy5049 46 GIRRISVLAHNTRYFRRKLNRLGLIVYGHRDSPVVPVLVF--FFSKVGQ-TS----IGLGVEQ--TALNDGLSLYESSHL 116 (153)
Q Consensus 46 ~~~rr~~L~~ni~~fr~~L~~~G~~~~~~s~SPIiPV~~g--~~~~~~~-~a----~~i~~Pt--VP~g~~RlRI~lsA~ 116 (153)
.++.+++++++..++++.|++.|+.+.....++++.+-+. +...... +. +.+.+.. -+.+...+||++..
T Consensus 343 ~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gI~v~pg~~f~~~~~~~iRis~~~- 421 (449)
T 3qgu_A 343 MNAMIKFYKENAQILKTTFTEMGFSVYGGDDAPYIWVGFPGKPSWDVFAEILERCNIVTTPGSGYGPAGEGFVRASAFG- 421 (449)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCEEESSSSSEEEEECTTSCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCS-
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCeeEEEEECCCCCHHHHHHHHHHHCCEEEecchHhCCCCCCeEEEEecC-
Confidence 4678899999999999999999987754445788888775 2222221 11 2222111 14567999999654
Q ss_pred CCHHHHHHHHHHHHHHHHhcC
Q psy5049 117 RSANLWNRPHSPSLMAVFRGG 137 (153)
Q Consensus 117 HT~edId~L~~~~L~~~~~~~ 137 (153)
|+|||+++++ .|+.+.+..
T Consensus 422 -~~e~i~~~l~-~l~~~~~~~ 440 (449)
T 3qgu_A 422 -SRENILEAVR-RFKEAYGKR 440 (449)
T ss_dssp -CHHHHHHHHH-HHHHHHC--
T ss_pred -CHHHHHHHHH-HHHHHHHhc
Confidence 9999999998 777666543
No 28
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=96.97 E-value=0.0079 Score=48.10 Aligned_cols=89 Identities=17% Similarity=0.033 Sum_probs=60.0
Q ss_pred chHHHHHHHHHHHHHHHHHHhCCCcccCCC----CCCeEEEEcCC--chHHHhcc----ccccCCCCCCCCceEEEEeeC
Q psy5049 46 GIRRISVLAHNTRYFRRKLNRLGLIVYGHR----DSPVVPVLVFF--FSKVGQTS----IGLGVEQTALNDGLSLYESSH 115 (153)
Q Consensus 46 ~~~rr~~L~~ni~~fr~~L~~~G~~~~~~s----~SPIiPV~~g~--~~~~~~~a----~~i~~PtVP~g~~RlRI~lsA 115 (153)
.++.+++++++..++.+.|.+.|+.+.... ...++.+.+.+ .....+.. ..++ |........+||++..
T Consensus 264 ~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~-~g~~~~~~~iRi~~~~ 342 (384)
T 3zrp_A 264 IENRIKRHTMVASAIRAGLEALGLEIVARRPESYSNTVTGVILKVADPQKVLAGTVNEGVEFA-PGVHPAFKYFRIGHMG 342 (384)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCBSCSSGGGBCSSEEEEECSSSCHHHHHHHHHTTTCCCE-ECCCTTCCEEEEECCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCeEccCcccccCccEEEEECCCCCHHHHHHHHHHCCEEEe-cCCCCCcCEEEEeccc
Confidence 367889999999999999999888764322 14566666653 22222222 2222 2210001789999999
Q ss_pred CCCHHHHHHHHHHHHHHHHhc
Q psy5049 116 LRSANLWNRPHSPSLMAVFRG 136 (153)
Q Consensus 116 ~HT~edId~L~~~~L~~~~~~ 136 (153)
.+|+||++++++ +|+.+.+.
T Consensus 343 ~~~~e~i~~~~~-~l~~~l~~ 362 (384)
T 3zrp_A 343 WVTPNDAIIAIS-VIERTLRK 362 (384)
T ss_dssp SCCHHHHHHHHH-HHHHHHHH
T ss_pred cCCHHHHHHHHH-HHHHHHHH
Confidence 999999999999 88766554
No 29
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=96.93 E-value=0.0053 Score=50.99 Aligned_cols=87 Identities=9% Similarity=-0.009 Sum_probs=58.8
Q ss_pred hHHHHHHHHHHHHHHHHHHhCCCcccCCCCCCeEEEEcCCch------HHHhcc--------ccccCC--CCCCCCceEE
Q psy5049 47 IRRISVLAHNTRYFRRKLNRLGLIVYGHRDSPVVPVLVFFFS------KVGQTS--------IGLGVE--QTALNDGLSL 110 (153)
Q Consensus 47 ~~rr~~L~~ni~~fr~~L~~~G~~~~~~s~SPIiPV~~g~~~------~~~~~a--------~~i~~P--tVP~g~~RlR 110 (153)
.+.+++++++..++++.|.+.|+.+.....+.++.+.+++.. ...+++ ..+.+. ..+.+...+|
T Consensus 328 ~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iR 407 (435)
T 3piu_A 328 AENHKRLKQRQKKLVSGLQKSGISCLNGNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFR 407 (435)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCEECCCCSSSEEEEECGGGSSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSTTEEE
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCcccCCCeeEEEEEEcccccccCCchhHHHHHHHHHHHCCEEEeCCcccCCCCCCEEE
Confidence 567889999999999999999987644333478888886521 111111 222211 1145678999
Q ss_pred EEeeCCCCHHHHHHHHHHHHHHHHh
Q psy5049 111 YESSHLRSANLWNRPHSPSLMAVFR 135 (153)
Q Consensus 111 I~lsA~HT~edId~L~~~~L~~~~~ 135 (153)
|+++.. |++||+++++ .|..+.+
T Consensus 408 i~~~~~-~~e~i~~~l~-~l~~~l~ 430 (435)
T 3piu_A 408 VCFANL-PERTLDLAMQ-RLKAFVG 430 (435)
T ss_dssp EECSSS-CHHHHHHHHH-HHHHHHH
T ss_pred EEeeCC-CHHHHHHHHH-HHHHHHH
Confidence 999444 9999999998 7766543
No 30
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=96.88 E-value=0.012 Score=47.02 Aligned_cols=85 Identities=7% Similarity=-0.019 Sum_probs=60.2
Q ss_pred chHHHHHHHHHHHHHHHHHHhCCCcccCCCCCCeEEEEcCC-chHHHhcc----ccccCCCCCCCCceEEEEeeCCCCHH
Q psy5049 46 GIRRISVLAHNTRYFRRKLNRLGLIVYGHRDSPVVPVLVFF-FSKVGQTS----IGLGVEQTALNDGLSLYESSHLRSAN 120 (153)
Q Consensus 46 ~~~rr~~L~~ni~~fr~~L~~~G~~~~~~s~SPIiPV~~g~-~~~~~~~a----~~i~~PtVP~g~~RlRI~lsA~HT~e 120 (153)
..+++++++++..++.+.|.+.|+.+. .+.+.++.+-+.. .....+.. +.++ ...+.+...+||+++ |++
T Consensus 262 ~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~-g~~~~~~~~iRis~~---~~~ 336 (354)
T 3ly1_A 262 ITYSKKSNDVSRQILLKALEDLKLPYL-PSEGNFVFHQLVVPLKDYQTHMADAGVLIG-RAFPPADNWCRISLG---TPQ 336 (354)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCCBC-CCCSSEEEEECSSCHHHHHHHHHHTTEECC-CCCTTCTTEEEEECC---CHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCeEC-CCCceEEEEECCCCHHHHHHHHHHCCEEEe-ecCCCCCCEEEEEcC---CHH
Confidence 367788999999999999998888764 4567777776653 33333322 3333 223336789999976 899
Q ss_pred HHHHHHHHHHHHHHhc
Q psy5049 121 LWNRPHSPSLMAVFRG 136 (153)
Q Consensus 121 dId~L~~~~L~~~~~~ 136 (153)
|++++++ +|+.+.+.
T Consensus 337 ~i~~~~~-~l~~~l~~ 351 (354)
T 3ly1_A 337 EMQWVAD-TMREFRKK 351 (354)
T ss_dssp HHHHHHH-HHHHHHHT
T ss_pred HHHHHHH-HHHHHHHh
Confidence 9999999 88776654
No 31
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=96.86 E-value=0.005 Score=49.76 Aligned_cols=89 Identities=10% Similarity=0.002 Sum_probs=60.6
Q ss_pred hHHHHHHHHHHHHHHHHHHhCCCcccCCC----CCCeEEEEcCC---chHHHhcc-----ccccCCCCCCCCceEEEEee
Q psy5049 47 IRRISVLAHNTRYFRRKLNRLGLIVYGHR----DSPVVPVLVFF---FSKVGQTS-----IGLGVEQTALNDGLSLYESS 114 (153)
Q Consensus 47 ~~rr~~L~~ni~~fr~~L~~~G~~~~~~s----~SPIiPV~~g~---~~~~~~~a-----~~i~~PtVP~g~~RlRI~ls 114 (153)
++.+++++++..++++.|.+.|+.+...+ ..+++.+.+.+ .....+.. +.+++-..+.+...+||++.
T Consensus 269 ~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gi~v~~g~~~~~~~~lRi~~~ 348 (392)
T 2z9v_A 269 EAVWARHALTAKAMRAGVTAMGLSVWAASDSIASPTTTAVRTPDGVDEKALRQAARARYGVVFSSGRGETLGKLTRIGHM 348 (392)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCBSSSSGGGBCTTEEEEECCTTCCHHHHHHHHHHHHCEECEECCGGGTTTEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCeeccCCccccCCceEEEECCCCCCHHHHHHHHHhcCCEEEecCCCCCCCCeEEEeCc
Confidence 56789999999999999998888764312 36777777742 22222221 22222112345688999987
Q ss_pred C-CCCHHHHHHHHHHHHHHHHhc
Q psy5049 115 H-LRSANLWNRPHSPSLMAVFRG 136 (153)
Q Consensus 115 A-~HT~edId~L~~~~L~~~~~~ 136 (153)
+ .+|++|++++++ +|+.+.+.
T Consensus 349 ~~~~~~~~i~~~~~-~l~~~~~~ 370 (392)
T 2z9v_A 349 GPTAQPIYAIAALT-ALGGAMNA 370 (392)
T ss_dssp GGGCSHHHHHHHHH-HHHHHHHH
T ss_pred ccccCHHHHHHHHH-HHHHHHHH
Confidence 7 999999999999 88766544
No 32
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=96.86 E-value=0.0038 Score=51.73 Aligned_cols=85 Identities=15% Similarity=0.079 Sum_probs=59.4
Q ss_pred hHHHHHHHHHHHHHHHHHHhCCCcccCCCCCCeEEEEcCCc--hHHHh-cc----cccc---CCCCCCCCceEEEEeeCC
Q psy5049 47 IRRISVLAHNTRYFRRKLNRLGLIVYGHRDSPVVPVLVFFF--SKVGQ-TS----IGLG---VEQTALNDGLSLYESSHL 116 (153)
Q Consensus 47 ~~rr~~L~~ni~~fr~~L~~~G~~~~~~s~SPIiPV~~g~~--~~~~~-~a----~~i~---~PtVP~g~~RlRI~lsA~ 116 (153)
++++++++++..++++.|.+.|+.+.+...++++.+-+++. ..... +. +.+. .+. |.|...+||++.
T Consensus 332 ~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~-~~~~~~iRis~~-- 408 (432)
T 3ei9_A 332 HKVIGFYKENTNIIIDTFTSLGYDVYGGKNAPYVWVHFPNQSSWDVFAEILEKTHVVTTPGSGFG-PGGEGFVRVSAF-- 408 (432)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCEEECSSSSEEEEECTTSCHHHHHHHHHHHHCEECEEGGGGC-GGGTTEEEEECC--
T ss_pred HHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEEECCCCCHHHHHHHHHHHCCEEEeCchHhC-CCCCCEEEEEec--
Confidence 67889999999999999999998775445678888887632 22222 11 2222 222 567899999984
Q ss_pred CCHHHHHHHHHHHHHHHHh
Q psy5049 117 RSANLWNRPHSPSLMAVFR 135 (153)
Q Consensus 117 HT~edId~L~~~~L~~~~~ 135 (153)
.++|+|++.++ .|+.-..
T Consensus 409 ~~~e~l~~~l~-rl~~~~~ 426 (432)
T 3ei9_A 409 GHRENILEACR-RFKQLYK 426 (432)
T ss_dssp SCHHHHHHHHH-HHHHHHT
T ss_pred CCHHHHHHHHH-HHHHHhh
Confidence 49999999877 6655443
No 33
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=96.80 E-value=0.0026 Score=51.19 Aligned_cols=89 Identities=9% Similarity=-0.014 Sum_probs=57.9
Q ss_pred hHHHHHHHHHHHHHHHHHHhCCCcccCCCCCCeEEEEcCC---chHHHhcc--c-cc-cCCC-CCCCCceEEEEeeCCCC
Q psy5049 47 IRRISVLAHNTRYFRRKLNRLGLIVYGHRDSPVVPVLVFF---FSKVGQTS--I-GL-GVEQ-TALNDGLSLYESSHLRS 118 (153)
Q Consensus 47 ~~rr~~L~~ni~~fr~~L~~~G~~~~~~s~SPIiPV~~g~---~~~~~~~a--~-~i-~~Pt-VP~g~~RlRI~lsA~HT 118 (153)
++.+++.+++..++++.|.+.|+.+.....++.+..+..+ .....+.. . .| ..|. -+.+...+||+++..+|
T Consensus 277 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~~~~~~~lRis~~~~~t 356 (376)
T 3f0h_A 277 DAEVARIASQAADFRAKIKDLPFELVSESPANGVTSVHPTTANAYDIFLKLKDEYGIWICPNGGEMKDTIFRVGHIGALT 356 (376)
T ss_dssp HHHHHHHHHHHHHHHHHTTTSSEEECCSSBBTTEEEEEESSSCHHHHHHHHHHHSSEECEECCGGGTTTCEEEECCSSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCccCccccCceEEEEeCCCCCHHHHHHHHHHhCCEEEecCccccCCCEEEEecCCCCC
Confidence 6688888999999999999988765433334444333322 22222221 1 22 2222 13456789999999999
Q ss_pred HHHHHHHHHHHHHHHHhc
Q psy5049 119 ANLWNRPHSPSLMAVFRG 136 (153)
Q Consensus 119 ~edId~L~~~~L~~~~~~ 136 (153)
+||++++++ +|+.+.+.
T Consensus 357 ~e~i~~~~~-~l~~~l~~ 373 (376)
T 3f0h_A 357 HEDNTTLVN-AFKDLQKR 373 (376)
T ss_dssp HHHHHHHHH-HHHHHHHT
T ss_pred HHHHHHHHH-HHHHHHHh
Confidence 999999999 88766543
No 34
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=96.80 E-value=0.0036 Score=49.65 Aligned_cols=84 Identities=10% Similarity=-0.062 Sum_probs=58.5
Q ss_pred hHHHHHHHHHHHHHHHHHHhCCCcccCCCCCCeEEEEcCCchHHHhcc--c-cc-cCCCCCCCCceEEEEeeCCCCHHHH
Q psy5049 47 IRRISVLAHNTRYFRRKLNRLGLIVYGHRDSPVVPVLVFFFSKVGQTS--I-GL-GVEQTALNDGLSLYESSHLRSANLW 122 (153)
Q Consensus 47 ~~rr~~L~~ni~~fr~~L~~~G~~~~~~s~SPIiPV~~g~~~~~~~~a--~-~i-~~PtVP~g~~RlRI~lsA~HT~edI 122 (153)
.+.++++.++..++.+.|+..|+.+.+.+.++++.+-+. ....+.. . .| .++..+.+...+||+++..+|++|+
T Consensus 267 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~gi~v~~~~~~~~~~iRi~~~~~~~~~~i 344 (359)
T 1svv_A 267 FELGAHSNKMAAILKAGLEACGIRLAWPSASNQLFPILE--NTMIAELNNDFDMYTVEPLKDGTCIMRLCTSWATEEKEC 344 (359)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCBSSCCSSSEECBEEE--HHHHHHHTTTEECEEEEEETTTEEEEEEECCTTCCHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccCCeEEccCCccceEEEEcC--HHHHHHHHHhcCEEEEecccCCCceEEEEccCcCCHHHH
Confidence 578899999999999999766877654445665443332 2222222 1 22 2555456678899999999999999
Q ss_pred HHHHHHHHHHH
Q psy5049 123 NRPHSPSLMAV 133 (153)
Q Consensus 123 d~L~~~~L~~~ 133 (153)
+++++ +|+.+
T Consensus 345 ~~~~~-~l~~~ 354 (359)
T 1svv_A 345 HRFVE-VLKRL 354 (359)
T ss_dssp HHHHH-HHHHC
T ss_pred HHHHH-HHHHH
Confidence 99888 76654
No 35
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=96.79 E-value=0.0092 Score=49.95 Aligned_cols=87 Identities=9% Similarity=-0.023 Sum_probs=55.7
Q ss_pred chHHHHHHHHHHHHHHHHHHhC-CCcccCCC-CCCeEEEEcC-CchHHHhcc----cccc-CCCCCCCCceEEEEeeCCC
Q psy5049 46 GIRRISVLAHNTRYFRRKLNRL-GLIVYGHR-DSPVVPVLVF-FFSKVGQTS----IGLG-VEQTALNDGLSLYESSHLR 117 (153)
Q Consensus 46 ~~~rr~~L~~ni~~fr~~L~~~-G~~~~~~s-~SPIiPV~~g-~~~~~~~~a----~~i~-~PtVP~g~~RlRI~lsA~H 117 (153)
.++.+++.+++..++.+.|++. |+.+.+.. ...++.+-++ +.....+.. ..+. .|..--+...+||+++..+
T Consensus 342 ~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gi~v~~~~~~~~~~~~lRis~~~~~ 421 (438)
T 1wyu_A 342 LREVALKSVEMAHKLHALLLEVPGVRPFTPKPFFNEFALALPKDPEAVRRALAERGFHGATPVPREYGENLALFAATELH 421 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSTTCEECSCSSBCSEEEEECSSCHHHHHHHHHHTTCCCCEECCTTSCSSEEEEECCTTC
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCeEECCCCCeEEEEEEeCCCCHHHHHHHHHHCCceeccccccccCCCeEEEEecccC
Confidence 3567888999999999999998 88774321 1223334333 222222222 2221 2332122679999999999
Q ss_pred CHHHHHHHHHHHHHHH
Q psy5049 118 SANLWNRPHSPSLMAV 133 (153)
Q Consensus 118 T~edId~L~~~~L~~~ 133 (153)
|++|++++++ +|+.+
T Consensus 422 t~edi~~~~~-~l~~~ 436 (438)
T 1wyu_A 422 EEEDLLALRE-ALKEV 436 (438)
T ss_dssp CHHHHHHHHH-HHHHH
T ss_pred CHHHHHHHHH-HHHHH
Confidence 9999999988 77654
No 36
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=96.78 E-value=0.0052 Score=49.87 Aligned_cols=89 Identities=15% Similarity=0.075 Sum_probs=60.6
Q ss_pred hHHHHHHHHHHHHHHHHHHhCCCcccCCC---CCCeEEEEcCC---chHHHhcc-----ccccCCCCCCCCceEEEEe-e
Q psy5049 47 IRRISVLAHNTRYFRRKLNRLGLIVYGHR---DSPVVPVLVFF---FSKVGQTS-----IGLGVEQTALNDGLSLYES-S 114 (153)
Q Consensus 47 ~~rr~~L~~ni~~fr~~L~~~G~~~~~~s---~SPIiPV~~g~---~~~~~~~a-----~~i~~PtVP~g~~RlRI~l-s 114 (153)
++.+++++++..++.+.|.+.|+.+.... ...++.+.+.+ .....+.. +.+++-..+.+...+||++ .
T Consensus 289 ~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~ 368 (411)
T 3nnk_A 289 DYGIARHKLHGDALVKGIQAMGLETFGDLKHKMNNVLGVVIPQGINGDQARKLMLEDFGIEIGTSFGPLHGKVWRIGTMG 368 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCBCSCGGGBCSSEEEEECCTTCCHHHHHHHHHHHHSEEEEECCGGGTTTEEEEECCG
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCEeCCCcccccccEEEEECCCCCCHHHHHHHHHHhcCeEEeCccCCCCCCEEEEeCcc
Confidence 57889999999999999999988764322 14577777642 22222221 2333222234567899998 6
Q ss_pred CCCCHHHHHHHHHHHHHHHHhc
Q psy5049 115 HLRSANLWNRPHSPSLMAVFRG 136 (153)
Q Consensus 115 A~HT~edId~L~~~~L~~~~~~ 136 (153)
..+|++|++++++ +|+.+.+.
T Consensus 369 ~~~~~~~i~~~~~-~l~~~l~~ 389 (411)
T 3nnk_A 369 YNARKDCVMTTLS-ALEAVLNY 389 (411)
T ss_dssp GGCSHHHHHHHHH-HHHHHHHH
T ss_pred CcCCHHHHHHHHH-HHHHHHHH
Confidence 6779999999999 88776654
No 37
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=96.74 E-value=0.0064 Score=49.00 Aligned_cols=88 Identities=14% Similarity=0.030 Sum_probs=59.6
Q ss_pred hHHHHHHHHHHHHHHHHHHhC-CCcccCCC-CCCeEEEEcCC--chHHHhcc---ccccCCCC--------CCC-CceEE
Q psy5049 47 IRRISVLAHNTRYFRRKLNRL-GLIVYGHR-DSPVVPVLVFF--FSKVGQTS---IGLGVEQT--------ALN-DGLSL 110 (153)
Q Consensus 47 ~~rr~~L~~ni~~fr~~L~~~-G~~~~~~s-~SPIiPV~~g~--~~~~~~~a---~~i~~PtV--------P~g-~~RlR 110 (153)
++.+++++++..++.+.|.+. |+.+.... .++++.+.+.+ .....+.. .....|.. +.| ...+|
T Consensus 300 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~g~~~~iR 379 (406)
T 1kmj_A 300 NNIAEYEQNLMHYALSQLESVPDLTLYGPQNRLGVIAFNLGKHHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCR 379 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSTTEEEESCTTCCSEEEEEETTCCHHHHHHHHHHTTEECEEECTTCHHHHHHTTCSCEEE
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCeEEecCCCcCCEEEEEECCCCHHHHHHHHhhCCcEEEeccccchHHHHhcCCCCeEE
Confidence 467888999999999999987 77654321 57888877642 22233222 11111211 112 47899
Q ss_pred EEeeCCCCHHHHHHHHHHHHHHHHh
Q psy5049 111 YESSHLRSANLWNRPHSPSLMAVFR 135 (153)
Q Consensus 111 I~lsA~HT~edId~L~~~~L~~~~~ 135 (153)
|+++..+|++|++++++ +++.+.+
T Consensus 380 is~~~~~t~~~i~~~~~-~l~~~~~ 403 (406)
T 1kmj_A 380 ASLAMYNTHEEVDRLVT-GLQRIHR 403 (406)
T ss_dssp EECCTTCCHHHHHHHHH-HHHHHHH
T ss_pred EEeecCCCHHHHHHHHH-HHHHHHH
Confidence 99999999999999999 8876654
No 38
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=96.72 E-value=0.0084 Score=48.65 Aligned_cols=89 Identities=8% Similarity=-0.009 Sum_probs=61.1
Q ss_pred hHHHHHHHHHHHHHHHHHHhCCCcccCC-CCCCeEEEEcCC----chHHHhcc----ccccC---C---CCCCCCceEEE
Q psy5049 47 IRRISVLAHNTRYFRRKLNRLGLIVYGH-RDSPVVPVLVFF----FSKVGQTS----IGLGV---E---QTALNDGLSLY 111 (153)
Q Consensus 47 ~~rr~~L~~ni~~fr~~L~~~G~~~~~~-s~SPIiPV~~g~----~~~~~~~a----~~i~~---P---tVP~g~~RlRI 111 (153)
++.+++++++..++.+.|.+.|+.+... +.++++.+.+.+ .....+.. +.+++ | .-+.+...+||
T Consensus 279 ~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~iRi 358 (405)
T 2vi8_A 279 KAYAKRVVDNAKRLASALQNEGFTLVSGGTDNHLLLVDLRPQQLTGKTAEKVLDEVGITVNKNTIPYDPESPFVTSGIRI 358 (405)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEECGGGTCCHHHHHHHHHHHTEECEEECCTTCSSCTTTCSEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCeEecCCCCceEEEEEccCCCCCHHHHHHHHHHcCceeccCcCccccCCCCCCCceEE
Confidence 6789999999999999999988876432 357888888753 22232222 11111 1 11223456999
Q ss_pred EeeC----CCCHHHHHHHHHHHHHHHHhc
Q psy5049 112 ESSH----LRSANLWNRPHSPSLMAVFRG 136 (153)
Q Consensus 112 ~lsA----~HT~edId~L~~~~L~~~~~~ 136 (153)
+++. .+|++|++++++ +|+.+.+.
T Consensus 359 s~~~~~~~~~~~~~i~~~~~-~l~~~~~~ 386 (405)
T 2vi8_A 359 GTAAVTTRGFGLEEMDEIAA-IIGLVLKN 386 (405)
T ss_dssp ECHHHHHTTCCHHHHHHHHH-HHHHHHTC
T ss_pred eeeeeeecCCCHHHHHHHHH-HHHHHHhc
Confidence 9997 799999999999 88776544
No 39
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=96.71 E-value=0.0071 Score=48.98 Aligned_cols=90 Identities=8% Similarity=-0.105 Sum_probs=58.5
Q ss_pred chHHHHHHHHHHHHHHHHHHhCCCcccCC------CCCCeEEEEcCC------chHHHhcc----ccc---cCC------
Q psy5049 46 GIRRISVLAHNTRYFRRKLNRLGLIVYGH------RDSPVVPVLVFF------FSKVGQTS----IGL---GVE------ 100 (153)
Q Consensus 46 ~~~rr~~L~~ni~~fr~~L~~~G~~~~~~------s~SPIiPV~~g~------~~~~~~~a----~~i---~~P------ 100 (153)
.++..++.+++..++++.|.+.++.+.+. +..++++|.+.+ .....+.. +.+ .+|
T Consensus 259 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~~~~~~~~ 338 (393)
T 1mdo_A 259 LDALNARRAAIAAQYHQAMADLPFQPLSLPSWEHIHAWHLFIIRVDEARCGITRDALMASLKTKGIGTGLHFRAAHTQKY 338 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSSCEECCCCSSCEECCCSCEEEECCHHHHSSCHHHHHHHHHHTTBCCBCCCCCGGGSHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCCCceeEEEEEEecccccccCHHHHHHHHHhCCCCcccccCccccChh
Confidence 35667778889999999999988654211 234578887752 22232222 222 122
Q ss_pred --------CCCC----CCceEEEEeeCCCCHHHHHHHHHHHHHHHHhc
Q psy5049 101 --------QTAL----NDGLSLYESSHLRSANLWNRPHSPSLMAVFRG 136 (153)
Q Consensus 101 --------tVP~----g~~RlRI~lsA~HT~edId~L~~~~L~~~~~~ 136 (153)
.+|. +...+|++++..+|++|++++++ +|+.+.+.
T Consensus 339 ~~~~~~~~~~~~~~~~~~~~lRi~~~~~~t~~~i~~~~~-~l~~~~~~ 385 (393)
T 1mdo_A 339 YRERFPTLTLPDTEWNSERICSLPLFPDMTESDFDRVIT-ALHQIAGQ 385 (393)
T ss_dssp HHHHSTTCCCHHHHHHHTTEEEECCCTTCCHHHHHHHHH-HHHHHHC-
T ss_pred hhccCCccCChhHHHHHhCEEEecCCCCCCHHHHHHHHH-HHHHHHhc
Confidence 2222 23479999999999999999999 88776554
No 40
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=96.67 E-value=0.01 Score=48.38 Aligned_cols=87 Identities=10% Similarity=-0.117 Sum_probs=61.2
Q ss_pred hHHHHHHHHHHHHHHHHHHhC----CCcccCCC----CCCeEEEEcCCchHHHhcc--ccccCCCCCCCCceEEEEeeC-
Q psy5049 47 IRRISVLAHNTRYFRRKLNRL----GLIVYGHR----DSPVVPVLVFFFSKVGQTS--IGLGVEQTALNDGLSLYESSH- 115 (153)
Q Consensus 47 ~~rr~~L~~ni~~fr~~L~~~----G~~~~~~s----~SPIiPV~~g~~~~~~~~a--~~i~~PtVP~g~~RlRI~lsA- 115 (153)
++.+++++++..++.+.|.+. |+.+.... .++++.+.+.+.....+.. ..|... +.+...+||+++.
T Consensus 304 ~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~--~~~~~~lRis~~~~ 381 (416)
T 1qz9_A 304 ASLRRKSLALTDLFIELVEQRCAAHELTLVTPREHAKRGSHVSFEHPEGYAVIQALIDRGVIGD--YREPRIMRFGFTPL 381 (416)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTSCCEECSCSSGGGBCSEEEEECTTHHHHHHHHHTTTEECE--EETTTEEEEECCTT
T ss_pred HHHHHHHHHHHHHHHHHHHhhccCCCeEEeCCCCHHHcCCEEEEecCCHHHHHHHHHhCCcEec--cCCCCeEEEeCccc
Confidence 568899999999999999986 88664332 3678888776543333322 222110 2246789999985
Q ss_pred CCCHHHHHHHHHHHHHHHHhc
Q psy5049 116 LRSANLWNRPHSPSLMAVFRG 136 (153)
Q Consensus 116 ~HT~edId~L~~~~L~~~~~~ 136 (153)
.+|++|++++++ +|+.+.+.
T Consensus 382 ~~t~~~i~~~~~-~l~~~~~~ 401 (416)
T 1qz9_A 382 YTTFTEVWDAVQ-ILGEILDR 401 (416)
T ss_dssp TCCHHHHHHHHH-HHHHHHHH
T ss_pred CCCHHHHHHHHH-HHHHHHhc
Confidence 899999999999 88766544
No 41
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=96.66 E-value=0.013 Score=47.72 Aligned_cols=88 Identities=14% Similarity=0.020 Sum_probs=61.6
Q ss_pred hHHHHHHHHHHHHHHHHHHhCCCcccC-CCCCCeEEEEcCC----chHHHhcc----cccc---CCC---CCCCCceEEE
Q psy5049 47 IRRISVLAHNTRYFRRKLNRLGLIVYG-HRDSPVVPVLVFF----FSKVGQTS----IGLG---VEQ---TALNDGLSLY 111 (153)
Q Consensus 47 ~~rr~~L~~ni~~fr~~L~~~G~~~~~-~s~SPIiPV~~g~----~~~~~~~a----~~i~---~Pt---VP~g~~RlRI 111 (153)
++.++++.++..++++.|.+.|+.+.. .+.++++.+.+.+ ...+.+.. ..++ +|. -|.+..++|+
T Consensus 289 ~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~p~~~~~~~~~~~iRi 368 (425)
T 3ecd_A 289 KTYIDRVLANAQALGDVLKAGGVDLVTGGTDNHLLLVDLRPKGLKGAQVEQALERAGITCNKNGIPFDPEKPTITSGIRL 368 (425)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEECGGGTCCHHHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCeeccCCCCceEEEEEeCCCCCCHHHHHHHHHHcCCEecccccCCCCCCCCCccceec
Confidence 578899999999999999999987642 2467888888753 12222222 2222 233 2344578999
Q ss_pred E----eeCCCCHHHHHHHHHHHHHHHHh
Q psy5049 112 E----SSHLRSANLWNRPHSPSLMAVFR 135 (153)
Q Consensus 112 ~----lsA~HT~edId~L~~~~L~~~~~ 135 (153)
+ .+..++++|++++++ +++.+.+
T Consensus 369 ~~~~~~~~~~~~e~i~~~~~-~l~~~l~ 395 (425)
T 3ecd_A 369 GTPAGTTRGFGAAEFREVGR-LILEVFE 395 (425)
T ss_dssp ESHHHHHTTCCHHHHHHHHH-HHHHHHH
T ss_pred cchhheeccCCHHHHHHHHH-HHHHHHh
Confidence 9 788889999999998 7765544
No 42
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=96.65 E-value=0.0077 Score=48.90 Aligned_cols=86 Identities=6% Similarity=-0.118 Sum_probs=56.8
Q ss_pred chHHHHHHHHHHHHHHHHHHhC-CCcccCCCCCCeEEEEcCCc----hHHHhcc--------ccccCCCCCCCCceEEEE
Q psy5049 46 GIRRISVLAHNTRYFRRKLNRL-GLIVYGHRDSPVVPVLVFFF----SKVGQTS--------IGLGVEQTALNDGLSLYE 112 (153)
Q Consensus 46 ~~~rr~~L~~ni~~fr~~L~~~-G~~~~~~s~SPIiPV~~g~~----~~~~~~a--------~~i~~PtVP~g~~RlRI~ 112 (153)
.++.+++++++..++++.|.+. |+.+.....+..+.+-+... ....+.. .+..++. |.+...+||+
T Consensus 305 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~-~~~~~~iRis 383 (407)
T 3nra_A 305 MEDRIARHQAIRDELLHVLRGCEGVFARTPQAGSYLFPRLPKLAVAPAEFVKILRLQAGVVVTPGTEFS-PHTADSVRLN 383 (407)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSTTCBCCCCSBSSEECCBCCCBSSCHHHHHHHHHHHHCEECEEGGGTC-TTCTTBEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCceeccCCeeEEEEEeCCCCCCCHHHHHHHHHHhCCEEEeCchhhC-CCCCCEEEEE
Confidence 3678889999999999999987 77653333345555555431 1222111 1122233 5678999999
Q ss_pred eeCCCCHHHHHHHHHHHHHHHHh
Q psy5049 113 SSHLRSANLWNRPHSPSLMAVFR 135 (153)
Q Consensus 113 lsA~HT~edId~L~~~~L~~~~~ 135 (153)
++. |++||+++++ .|..+.+
T Consensus 384 ~~~--~~~~i~~~~~-~l~~~~~ 403 (407)
T 3nra_A 384 FSQ--DHEAAVAAAR-RIVTLVE 403 (407)
T ss_dssp CCS--CHHHHHHHHH-HHHHHHH
T ss_pred eCC--CHHHHHHHHH-HHHHHHH
Confidence 985 9999999988 7765543
No 43
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=96.60 E-value=0.014 Score=46.17 Aligned_cols=85 Identities=13% Similarity=-0.085 Sum_probs=58.0
Q ss_pred chHHHHHHHHHHHHHHHHHHhCCCcccCCCCCCeEEEEcCCchHHHhcc----ccccCCCCCCCCceEEEEeeCCCCHHH
Q psy5049 46 GIRRISVLAHNTRYFRRKLNRLGLIVYGHRDSPVVPVLVFFFSKVGQTS----IGLGVEQTALNDGLSLYESSHLRSANL 121 (153)
Q Consensus 46 ~~~rr~~L~~ni~~fr~~L~~~G~~~~~~s~SPIiPV~~g~~~~~~~~a----~~i~~PtVP~g~~RlRI~lsA~HT~ed 121 (153)
..+.++++.++..++.+.|++.|+.+. .+.+.++.+...+...+.+.. +.+++-........+||+++ +++|
T Consensus 247 ~~~~~~~~~~~~~~l~~~L~~~g~~~~-~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~iRis~~---~~~~ 322 (337)
T 3p1t_A 247 REAHIAKTLAQRRRVADALRGLGYRVA-SSEANFVLVENAAGERTLRFLRERGIQVKDAGQFGLHHHIRISIG---REED 322 (337)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCBC-CCSSSEEEEECTTTHHHHHHHHHTTEECEEGGGGTCCSEEEEECC---CHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHCcCEEC-CCCCeEEEEEcCCHHHHHHHHHHCCeEEEECccCCCCCeEEEecC---CHHH
Confidence 356778888999999999999998764 456777777666655444433 22211111111468999987 7999
Q ss_pred HHHHHHHHHHHHHh
Q psy5049 122 WNRPHSPSLMAVFR 135 (153)
Q Consensus 122 Id~L~~~~L~~~~~ 135 (153)
++++++ +++.+.+
T Consensus 323 ~~~l~~-al~~~~~ 335 (337)
T 3p1t_A 323 NDRLLA-ALAEYSD 335 (337)
T ss_dssp HHHHHH-HHHHHTC
T ss_pred HHHHHH-HHHHHhh
Confidence 999998 8877653
No 44
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=96.60 E-value=0.0096 Score=47.86 Aligned_cols=90 Identities=8% Similarity=-0.042 Sum_probs=57.7
Q ss_pred chHHHHHHHHHHHHHHHHHHhCC--CcccCCCC-----CCeEEEEcCCchHHHhcc----c--cccCC-CCC--------
Q psy5049 46 GIRRISVLAHNTRYFRRKLNRLG--LIVYGHRD-----SPVVPVLVFFFSKVGQTS----I--GLGVE-QTA-------- 103 (153)
Q Consensus 46 ~~~rr~~L~~ni~~fr~~L~~~G--~~~~~~s~-----SPIiPV~~g~~~~~~~~a----~--~i~~P-tVP-------- 103 (153)
.++..++.+++..++++.|.+.+ +.+....+ ...+++...+.....+.. + ...+| .+.
T Consensus 247 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gi~v~~~~~~~~~~~~~~~~~ 326 (374)
T 3uwc_A 247 LETITEKRRGIAHLYDQSFVDLSEFIDVPVRREGVYHVFHIYVLRVKYRDQLFQYLKDNGIEVKIHYPIAMHLQPAAKSL 326 (374)
T ss_dssp HHHHHHHHHHHHHHHHHHTGGGTTTEECCCCCTTEECCCSSEEEEETTHHHHHHHHHHTTBCCBCSCSSCGGGSGGGGGG
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCeEEeccCCCCCceeeEEEEEEcCCHHHHHHHHHHCCCccccCCCCccccChhhhhc
Confidence 36678888999999999999876 43321111 134555555544444432 1 11221 111
Q ss_pred ------------CCCceEEEEeeCCCCHHHHHHHHHHHHHHHHhc
Q psy5049 104 ------------LNDGLSLYESSHLRSANLWNRPHSPSLMAVFRG 136 (153)
Q Consensus 104 ------------~g~~RlRI~lsA~HT~edId~L~~~~L~~~~~~ 136 (153)
.....+|++++..+|+|||+++++ +++.+.+.
T Consensus 327 ~~~~~~~~~~~~~~~~~lrl~~~~~~t~edi~~~~~-~l~~~l~~ 370 (374)
T 3uwc_A 327 GYQQGDFPMAEKHGEAVITLPAHPYLTEEEINYIIK-KVREFYLE 370 (374)
T ss_dssp CCCTTSCHHHHHHHHHEEEECCCTTSCHHHHHHHHH-HHHHHHHT
T ss_pred CCccCCCccHHHHHhCEEEccCCCCCCHHHHHHHHH-HHHHHHHh
Confidence 112789999999999999999999 88776654
No 45
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=96.60 E-value=0.01 Score=48.19 Aligned_cols=89 Identities=16% Similarity=0.033 Sum_probs=60.5
Q ss_pred hHHHHHHHHHHHHHHHHHHhC-CCcccCCC-----CCCeEEEEcCC--chHHHhcc---ccccCCC----CC----CC-C
Q psy5049 47 IRRISVLAHNTRYFRRKLNRL-GLIVYGHR-----DSPVVPVLVFF--FSKVGQTS---IGLGVEQ----TA----LN-D 106 (153)
Q Consensus 47 ~~rr~~L~~ni~~fr~~L~~~-G~~~~~~s-----~SPIiPV~~g~--~~~~~~~a---~~i~~Pt----VP----~g-~ 106 (153)
++++++++++..++.+.|.+. |+.+.... .++++.+.+.+ .....+.. .....|. +| .| .
T Consensus 304 ~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~g~~ 383 (420)
T 1t3i_A 304 ENIHNYEVELTHYLWQGLGQIPQLRLYGPNPKHGDRAALASFNVAGLHASDVATMVDQDGIAIRSGHHCTQPLHRLFDAS 383 (420)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCTTEEEESCCGGGSCBCSEEEEEETTBCHHHHHHHHHTTTEECBCSCTTCHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCeEEeCCCccccccCCEEEEEECCCCHHHHHHHHHHCCeEEeeccccchHHHHhcCCC
Confidence 677889999999999999987 77654332 27788877653 22233322 1111221 11 23 5
Q ss_pred ceEEEEeeCCCCHHHHHHHHHHHHHHHHhc
Q psy5049 107 GLSLYESSHLRSANLWNRPHSPSLMAVFRG 136 (153)
Q Consensus 107 ~RlRI~lsA~HT~edId~L~~~~L~~~~~~ 136 (153)
..+||+++..+|++|++++++ +|+.+.+.
T Consensus 384 ~~iRis~~~~~~~~~i~~~~~-~l~~~~~~ 412 (420)
T 1t3i_A 384 GSARASLYFYNTKEEIDLFLQ-SLQATIRF 412 (420)
T ss_dssp CCEEEECCTTCCHHHHHHHHH-HHHHHHHH
T ss_pred CeEEEecCCCCCHHHHHHHHH-HHHHHHHH
Confidence 789999999999999999999 88766543
No 46
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=96.57 E-value=0.009 Score=50.68 Aligned_cols=90 Identities=6% Similarity=-0.200 Sum_probs=61.8
Q ss_pred cchHHHHHHHHHHHHHHHHHHhC-CCcccCCCCCCeEEEEcCCc----hHHHhcc----ccccCCCCCCCCceEEEEeeC
Q psy5049 45 SGIRRISVLAHNTRYFRRKLNRL-GLIVYGHRDSPVVPVLVFFF----SKVGQTS----IGLGVEQTALNDGLSLYESSH 115 (153)
Q Consensus 45 ~~~~rr~~L~~ni~~fr~~L~~~-G~~~~~~s~SPIiPV~~g~~----~~~~~~a----~~i~~PtVP~g~~RlRI~lsA 115 (153)
...++.++..++..+|.+.|.+. |+.+...+..+++.+.+.+. ....+.. ..+..|++-.+...+|+++..
T Consensus 373 g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~ 452 (486)
T 1js3_A 373 GLQAYIRKHVQLSHEFEAFVLQDPRFEVCAEVTLGLVCFRLKGSDGLNEALLERINSARKIHLVPCRLRGQFVLRFAICS 452 (486)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCTTEEECSCCCSSEEEEEESSCHHHHHHHHHHHHHHTSCBCEEEEETTEEEEEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCceeEEEEEecChHHHHHHHHHHHHhcCCEEEEEEEECCEEEEEEEeCC
Confidence 34667888899999999999986 77765445577888776532 1222211 333445544567899999754
Q ss_pred -CCCHHHHHHHHHHHHHHHHh
Q psy5049 116 -LRSANLWNRPHSPSLMAVFR 135 (153)
Q Consensus 116 -~HT~edId~L~~~~L~~~~~ 135 (153)
..|++||+++++ .|+.+.+
T Consensus 453 ~~~t~~di~~~~~-~l~~~~~ 472 (486)
T 1js3_A 453 RKVESGHVRLAWE-HIRGLAA 472 (486)
T ss_dssp TTCCHHHHHHHHH-HHHHHHH
T ss_pred CCCCHHHHHHHHH-HHHHHHH
Confidence 578999999998 7765543
No 47
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=96.57 E-value=0.015 Score=46.36 Aligned_cols=86 Identities=6% Similarity=-0.153 Sum_probs=57.8
Q ss_pred hHHHHHHHHHHHHHHHHHHhCC-C-ccc--CCCCCC-eEEEEcCCchHHHhcc------ccccCCCCCCCCceEEEEeeC
Q psy5049 47 IRRISVLAHNTRYFRRKLNRLG-L-IVY--GHRDSP-VVPVLVFFFSKVGQTS------IGLGVEQTALNDGLSLYESSH 115 (153)
Q Consensus 47 ~~rr~~L~~ni~~fr~~L~~~G-~-~~~--~~s~SP-IiPV~~g~~~~~~~~a------~~i~~PtVP~g~~RlRI~lsA 115 (153)
++++++++++..++.+.|.+.+ + ... ....++ ++.+.+.+.....++. .....|..+ ....+|++++.
T Consensus 261 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~-~~~~iRis~~~ 339 (360)
T 1w23_A 261 EAIAKQNEEKAKIIYDTIDESNGFYVGHAEKGSRSLMNVTFNLRNEELNQQFLAKAKEQGFVGLNGHR-SVGGCRASIYN 339 (360)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTTSSEESSCGGGBCSSEEEEECSSHHHHHHHHHHHHHTTEESCBCCT-TTCSEEEECCT
T ss_pred HHHHHHHHHHHHHHHHHHHHccCcccccCCchhccCcEEEEEcCCCccHHHHHHHHHHCCeeeecCCC-CCCeEEEEecC
Confidence 5678999999999999999876 4 321 111345 8888776532222222 111233322 24679999999
Q ss_pred CCCHHHHHHHHHHHHHHHH
Q psy5049 116 LRSANLWNRPHSPSLMAVF 134 (153)
Q Consensus 116 ~HT~edId~L~~~~L~~~~ 134 (153)
.+|++|++++++ +++.+.
T Consensus 340 ~~~~~~i~~~~~-~l~~~~ 357 (360)
T 1w23_A 340 AVPIDACIALRE-LMIQFK 357 (360)
T ss_dssp TSCHHHHHHHHH-HHHHHH
T ss_pred CCCHHHHHHHHH-HHHHHH
Confidence 999999999998 887654
No 48
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=96.56 E-value=0.019 Score=46.08 Aligned_cols=82 Identities=6% Similarity=-0.156 Sum_probs=56.4
Q ss_pred hHHHHHHHHHHHHHHHHHHh-CCCcccCCCCCCeEEEEcCC-chHHHhcc----ccccCCCCCCCCceEEEEeeCCCCHH
Q psy5049 47 IRRISVLAHNTRYFRRKLNR-LGLIVYGHRDSPVVPVLVFF-FSKVGQTS----IGLGVEQTALNDGLSLYESSHLRSAN 120 (153)
Q Consensus 47 ~~rr~~L~~ni~~fr~~L~~-~G~~~~~~s~SPIiPV~~g~-~~~~~~~a----~~i~~PtVP~g~~RlRI~lsA~HT~e 120 (153)
.+.+++++++..++.+.|.+ .|+.+. .+.+.++.+-+.. .....+.. ..+++-..+.....+||+++ |++
T Consensus 275 ~~~~~~~~~~~~~l~~~l~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~iRis~~---~~~ 350 (363)
T 3ffh_A 275 GECRTSNANGIKQYEAFAKRFEKVKLY-PANGNFVLIDLGIEAGTIFSYLEKNGYITRSGAALGFPTAVRITIG---KEE 350 (363)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCTTCEEC-CCCSSEEEEECSSCHHHHHHHHHHTTEECEETTTTTCTTEEEEECC---CHH
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCceEC-CCCCeEEEEECCCCHHHHHHHHHHCCeEEEeCccCCCCCeEEEECC---CHH
Confidence 67788899999999999998 888764 4567777777763 33333322 22222221222579999987 999
Q ss_pred HHHHHHHHHHHHH
Q psy5049 121 LWNRPHSPSLMAV 133 (153)
Q Consensus 121 dId~L~~~~L~~~ 133 (153)
|++++++ +|+.+
T Consensus 351 ~i~~~~~-~l~~~ 362 (363)
T 3ffh_A 351 DNSAVIA-LLEKL 362 (363)
T ss_dssp HHHHHHH-HHHHH
T ss_pred HHHHHHH-HHHHh
Confidence 9999998 77653
No 49
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=96.55 E-value=0.014 Score=47.17 Aligned_cols=90 Identities=10% Similarity=0.016 Sum_probs=59.5
Q ss_pred chHHHHHHHHHHHHHHHHHHhCCCcccCCCC---CC-eEEEEcC---CchHHHhcc-----ccccCCCCCCCCceEEEEe
Q psy5049 46 GIRRISVLAHNTRYFRRKLNRLGLIVYGHRD---SP-VVPVLVF---FFSKVGQTS-----IGLGVEQTALNDGLSLYES 113 (153)
Q Consensus 46 ~~~rr~~L~~ni~~fr~~L~~~G~~~~~~s~---SP-IiPV~~g---~~~~~~~~a-----~~i~~PtVP~g~~RlRI~l 113 (153)
.++.+++++++..++.+.|.+.|+.+..... +| ++.+.+. +.....+.. +.++.-..+.+...+||++
T Consensus 280 ~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~gi~v~~g~~~~~~~~iRi~~ 359 (396)
T 2ch1_A 280 LENQIKRRIECAQILYEGLGKMGLDIFVKDPRHRLPTVTGIMIPKGVDWWKVSQYAMNNFSLEVQGGLGPTFGKAWRVGI 359 (396)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCCBSSCSGGGBCTTEEEEECCTTCCHHHHHHHHHHHHCBCCBCCCGGGTTTEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCeeccCCccccCCceEEEEcCCCCCHHHHHHHHHHhCCEEEecCccccCCCEEEEEC
Confidence 3567889999999999999988887643221 23 7777664 222222211 2223212233567899999
Q ss_pred e-CCCCHHHHHHHHHHHHHHHHhc
Q psy5049 114 S-HLRSANLWNRPHSPSLMAVFRG 136 (153)
Q Consensus 114 s-A~HT~edId~L~~~~L~~~~~~ 136 (153)
+ ..+|+||++++++ +|+.+.+.
T Consensus 360 ~~~~~~~e~i~~~~~-~l~~~l~~ 382 (396)
T 2ch1_A 360 MGECSTVQKIQFYLY-GFKESLKA 382 (396)
T ss_dssp CGGGCSHHHHHHHHH-HHHHHHHH
T ss_pred CCCcCCHHHHHHHHH-HHHHHHHH
Confidence 5 5779999999999 88776554
No 50
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=96.55 E-value=0.0069 Score=48.67 Aligned_cols=83 Identities=12% Similarity=0.031 Sum_probs=57.3
Q ss_pred chHHHHHHHHHHHHHHHHHHhC-CCcccC--CCCCCeEEEEcCC---chHHHhcc---ccccCCCCCCCCceEEEEeeCC
Q psy5049 46 GIRRISVLAHNTRYFRRKLNRL-GLIVYG--HRDSPVVPVLVFF---FSKVGQTS---IGLGVEQTALNDGLSLYESSHL 116 (153)
Q Consensus 46 ~~~rr~~L~~ni~~fr~~L~~~-G~~~~~--~s~SPIiPV~~g~---~~~~~~~a---~~i~~PtVP~g~~RlRI~lsA~ 116 (153)
.++.+++++++..++.+.|.+. |+.+.. .+.++++.+-+.. .....+.. .....|.. +...+||+++..
T Consensus 295 ~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~--~~~~iRis~~~~ 372 (390)
T 1elu_A 295 AEERYQAICQRSEFLWRGLNQLPHVHCLATSAPQAGLVSFTVDSPLGHRAIVQKLEEQRIYLRTIA--DPDCIRACCHYI 372 (390)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSTTEEESCSSCCSSSEEEEEECSSSCHHHHHHHHHHTTEECEEET--TTTEEEEECCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcEEecCccccccEEEEEcCCCCCHHHHHHHHHHCCEEEEecC--CCCeEEEecccC
Confidence 4668899999999999999987 776543 2457788887642 22222222 11222221 357899999999
Q ss_pred CCHHHHHHHHHHHHH
Q psy5049 117 RSANLWNRPHSPSLM 131 (153)
Q Consensus 117 HT~edId~L~~~~L~ 131 (153)
+|++|++++++ +|+
T Consensus 373 ~~~~~i~~~~~-~l~ 386 (390)
T 1elu_A 373 TDEEEINHLLA-RLA 386 (390)
T ss_dssp CCHHHHHHHHH-HHT
T ss_pred CCHHHHHHHHH-HHH
Confidence 99999999887 554
No 51
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=96.46 E-value=0.0052 Score=49.16 Aligned_cols=87 Identities=13% Similarity=0.174 Sum_probs=58.7
Q ss_pred HHHHHH--HHHHHHHHHHHHhCCCcccCCC--CCCeEEEEcCCchHHHhcc----ccccC--CCC---CCCCceEE-EEe
Q psy5049 48 RRISVL--AHNTRYFRRKLNRLGLIVYGHR--DSPVVPVLVFFFSKVGQTS----IGLGV--EQT---ALNDGLSL-YES 113 (153)
Q Consensus 48 ~rr~~L--~~ni~~fr~~L~~~G~~~~~~s--~SPIiPV~~g~~~~~~~~a----~~i~~--PtV---P~g~~RlR-I~l 113 (153)
+.++++ +++..++.+.|.+.|+.+.... .++++.+.+++.....+.. ..+.+ +.+ ......+| +++
T Consensus 267 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~g~~~~~iRii~~ 346 (371)
T 2e7j_A 267 RIKRWDEEVEKARRFAAEMEKLGIKQLGDNPHNHDLMFFHAEVLYEISKKAKGGRFFLYRELKSRKIHGIKPGLTRYFKL 346 (371)
T ss_dssp HGGGHHHHHHHHHHHHHHHHHTTCEEESSSSCCSSEEEEECHHHHHHHHHSSSGGGHHHHHHHHTTEECSCTTCCSEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCcEEecCCCccCceEEEECCCHHHHHHHHHHCCEEEEeccccccccCCCCCceEEEEe
Confidence 567788 8999999999998888764332 4778877775222232222 22221 111 11257899 999
Q ss_pred eCC-CCHHHHHHHHHHHHHHHHh
Q psy5049 114 SHL-RSANLWNRPHSPSLMAVFR 135 (153)
Q Consensus 114 sA~-HT~edId~L~~~~L~~~~~ 135 (153)
+.. +|++|++++++ +|+.+.+
T Consensus 347 ~~~~~~~~~i~~~~~-~l~~~~~ 368 (371)
T 2e7j_A 347 STYGLSDEEVDYVLN-AFKEIIE 368 (371)
T ss_dssp ECTTCCHHHHHHHHH-HHHHHHH
T ss_pred eccCCCHHHHHHHHH-HHHHHHH
Confidence 998 99999999999 8876654
No 52
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=96.45 E-value=0.017 Score=46.34 Aligned_cols=84 Identities=0% Similarity=-0.095 Sum_probs=57.0
Q ss_pred chHHHHHHHHHHHHHHHHHHhCCCcccCCCCCCeEEEEcCC--chHHHhcc---ccccCCCCCCCCceEEEEeeCCCCHH
Q psy5049 46 GIRRISVLAHNTRYFRRKLNRLGLIVYGHRDSPVVPVLVFF--FSKVGQTS---IGLGVEQTALNDGLSLYESSHLRSAN 120 (153)
Q Consensus 46 ~~~rr~~L~~ni~~fr~~L~~~G~~~~~~s~SPIiPV~~g~--~~~~~~~a---~~i~~PtVP~g~~RlRI~lsA~HT~e 120 (153)
..+.+++++++..++.+.|.+.|+.+. .+.+..+.+-+.+ .....+.. .....|.-.-+...+||+++ |++
T Consensus 276 ~~~~~~~~~~~~~~l~~~l~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~iRis~~---~~~ 351 (365)
T 3get_A 276 TEKTLENNFSQMELYKEFAKKHNIKII-DSYTNFITYFFDEKNSTDLSEKLLKKGIIIRNLKSYGLNAIRITIG---TSY 351 (365)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCEEC-CCSSSEEEEECSSSCHHHHHHHHHTTTEECEECGGGTCSEEEEECC---CHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCEEC-CCCCeEEEEECCCCCHHHHHHHHHHCCEEEEECccCCCCEEEEEcC---CHH
Confidence 367888999999999999999998764 4566777776654 23333222 11122221112688999987 899
Q ss_pred HHHHHHHHHHHHHH
Q psy5049 121 LWNRPHSPSLMAVF 134 (153)
Q Consensus 121 dId~L~~~~L~~~~ 134 (153)
|++++++ +|+.+.
T Consensus 352 ~i~~l~~-~l~~~l 364 (365)
T 3get_A 352 ENEKFFT-EFDKIL 364 (365)
T ss_dssp HHHHHHH-HHHHHH
T ss_pred HHHHHHH-HHHHHh
Confidence 9999998 777653
No 53
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=96.44 E-value=0.016 Score=48.10 Aligned_cols=84 Identities=12% Similarity=0.105 Sum_probs=58.1
Q ss_pred hHHHHHHHHHHHHHHHHHHhC-CCccc---C--------------CCCCCeEEEEcCCchHHHhcc------ccc-----
Q psy5049 47 IRRISVLAHNTRYFRRKLNRL-GLIVY---G--------------HRDSPVVPVLVFFFSKVGQTS------IGL----- 97 (153)
Q Consensus 47 ~~rr~~L~~ni~~fr~~L~~~-G~~~~---~--------------~s~SPIiPV~~g~~~~~~~~a------~~i----- 97 (153)
.++.++.+++..+|.+.|.+. |+... + .+..+|+++.+++.+.+..+. .+.
T Consensus 280 ~~~~~~~~~~~~~l~~~L~~~~~v~~v~~p~~~~~p~~~~~~~~~~~~~~iv~~~~~~~~~~~~~l~~~~i~~~~s~g~~ 359 (412)
T 2cb1_A 280 ALRVARMSETARFLAERLQGHPKVKALRYPGLPEDPAHRNARKYLASGGPILTLDLGDLERASRFLGAIRLLKAANLGDA 359 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCTTCSEEECTTSTTCTTHHHHHHHCSSSCSEEEEECSSHHHHHHHHHHCSSEECSCCSCS
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHHhCCCCceEEEEEeCCHHHHHHHHHhCCeeeecccCCC
Confidence 566777889999999999875 55421 1 124679999996444444433 111
Q ss_pred ----cCCCC------CC------C--CceEEEEeeCCCCHHHHHHHHHHHHH
Q psy5049 98 ----GVEQT------AL------N--DGLSLYESSHLRSANLWNRPHSPSLM 131 (153)
Q Consensus 98 ----~~PtV------P~------g--~~RlRI~lsA~HT~edId~L~~~~L~ 131 (153)
.+|+. |. | .+.+|++++..+|+++|+.+.+ +|+
T Consensus 360 ~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iR~s~g~~~~~~~i~~l~~-al~ 410 (412)
T 2cb1_A 360 RTLLVHPWTTTHSRLKEEARLQAGVTPGLVRVSVGLEDPLDLLALFEE-ALE 410 (412)
T ss_dssp SCEEECTTTTTTTTSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHH-HHH
T ss_pred cceeecCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHH-HHh
Confidence 35532 21 1 6899999999999999999988 665
No 54
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=96.44 E-value=0.011 Score=47.97 Aligned_cols=84 Identities=18% Similarity=0.084 Sum_probs=56.1
Q ss_pred hHHHHHHHHHHHHHHHHHHhC-CCcccCC--CCCCeEEEEcCC--chHHHhcc----ccccC---C------CCCCCCce
Q psy5049 47 IRRISVLAHNTRYFRRKLNRL-GLIVYGH--RDSPVVPVLVFF--FSKVGQTS----IGLGV---E------QTALNDGL 108 (153)
Q Consensus 47 ~~rr~~L~~ni~~fr~~L~~~-G~~~~~~--s~SPIiPV~~g~--~~~~~~~a----~~i~~---P------tVP~g~~R 108 (153)
++.+++++++..++.+.|.+. |+.+.+. ..++++.+.+.+ .....+.. +.++. + ..+.+...
T Consensus 302 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gi~v~~g~~~~~~~~~g~~~~~~~ 381 (406)
T 3cai_A 302 QSADAYLNRVFDYLMVSLRSLPLVMLIGRPEAQIPVVSFAVHKVPADRVVQRLADNGILAIANTGSRVLDVLGVNDVGGA 381 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCTTEEECCCCSSBCSEEEEEETTBCHHHHHHHHHHTTEECEECCSCHHHHHHTTTTTTCC
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCeEEcCCccccCCEEEEEECCcCHHHHHHHHHHCCcEEecCChHHHHHHcCCCCCCCe
Confidence 567888999999999999986 6655332 136788777653 22232222 22211 0 12234578
Q ss_pred EEEEeeCCCCHHHHHHHHHHHHH
Q psy5049 109 SLYESSHLRSANLWNRPHSPSLM 131 (153)
Q Consensus 109 lRI~lsA~HT~edId~L~~~~L~ 131 (153)
+||+++..+|+||++++++ +|+
T Consensus 382 iRis~~~~~t~e~i~~~~~-~l~ 403 (406)
T 3cai_A 382 VTVGLAHYSTMAEVDQLVR-ALA 403 (406)
T ss_dssp EEEECCTTCCHHHHHHHHH-HHH
T ss_pred EEEEeecCCCHHHHHHHHH-HHH
Confidence 9999999999999999888 665
No 55
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=96.41 E-value=0.0084 Score=50.57 Aligned_cols=84 Identities=8% Similarity=-0.069 Sum_probs=59.6
Q ss_pred hHHHHHHHHHHHHHHHHHHhCCCcccC--CCCCCeEEEEcCCc-----hHHHhcc---ccccCCCCCCCCceEEEEeeCC
Q psy5049 47 IRRISVLAHNTRYFRRKLNRLGLIVYG--HRDSPVVPVLVFFF-----SKVGQTS---IGLGVEQTALNDGLSLYESSHL 116 (153)
Q Consensus 47 ~~rr~~L~~ni~~fr~~L~~~G~~~~~--~s~SPIiPV~~g~~-----~~~~~~a---~~i~~PtVP~g~~RlRI~lsA~ 116 (153)
++.+++++++..+|++.|.+.++.+.+ .+...++.|.+.++ ....... ..+..| .+...+|++++..
T Consensus 343 ~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~g~~~~v~l~~~~~~~~~~l~~~l~~~Gv~v~~---~~~~~iRi~~~~~ 419 (439)
T 2oat_A 343 ENLAENADKLGIILRNELMKLPSDVVTAVRGKGLLNAIVIKETKDWDAWKVCLRLRDNGLLAKP---THGDIIRFAPPLV 419 (439)
T ss_dssp TTHHHHHHHHHHHHHHHHTTSCTTTEEEEEEETTEEEEEECCCSSCCHHHHHHHHHHTTEECCB---SSSSEEEECCCTT
T ss_pred hhHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeeeEEEEEEecCccHHHHHHHHHHHHCCeEEec---CCCCEEEEECccC
Confidence 468899999999999999988764311 24467888887653 1222222 222233 3568999999999
Q ss_pred CCHHHHHHHHHHHHHHHH
Q psy5049 117 RSANLWNRPHSPSLMAVF 134 (153)
Q Consensus 117 HT~edId~L~~~~L~~~~ 134 (153)
+|+||++++++ +++.+.
T Consensus 420 ~t~e~i~~~l~-~l~~~l 436 (439)
T 2oat_A 420 IKEDELRESIE-IINKTI 436 (439)
T ss_dssp CCHHHHHHHHH-HHHHHH
T ss_pred CCHHHHHHHHH-HHHHHH
Confidence 99999999998 776654
No 56
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=96.40 E-value=0.016 Score=46.31 Aligned_cols=87 Identities=13% Similarity=0.061 Sum_probs=56.7
Q ss_pred hHHHHHHHHHHHHHHHHHHhC-CCcccCCCC---CCeEEEEcCC--chHHHhcc----ccccCCCC--------------
Q psy5049 47 IRRISVLAHNTRYFRRKLNRL-GLIVYGHRD---SPVVPVLVFF--FSKVGQTS----IGLGVEQT-------------- 102 (153)
Q Consensus 47 ~~rr~~L~~ni~~fr~~L~~~-G~~~~~~s~---SPIiPV~~g~--~~~~~~~a----~~i~~PtV-------------- 102 (153)
++++++++++..++.+.|.+. |+.+.+... ..++.+.+.+ .....+.. +.++ |..
T Consensus 255 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~-~g~~~~~~~~~~~~~~~ 333 (382)
T 4eb5_A 255 REEAERLRRLRDRIIDNVLKIEESYLNGHPEKRLPNNVNVRFSYIEGESIVLSLDMAGIQAS-TGSACSSKTLQPSHVLM 333 (382)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSTTEEECSCSSSBCTTEEEEEETTSCHHHHHHHHHHHTCBCB-CCCGGGTSSCCCCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCeEEeCCcccCCCCEEEEEeCCcCHHHHHHHHHHCCEEEe-ccccccCCCCcccHHHH
Confidence 567888899999999999886 665533211 4477776642 22222222 2221 111
Q ss_pred ----C--CCCceEEEEeeCCCCHHHHHHHHHHHHHHHHh
Q psy5049 103 ----A--LNDGLSLYESSHLRSANLWNRPHSPSLMAVFR 135 (153)
Q Consensus 103 ----P--~g~~RlRI~lsA~HT~edId~L~~~~L~~~~~ 135 (153)
+ .+...+||+++..+|+||++++++ +|+.+.+
T Consensus 334 ~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~-~l~~~~~ 371 (382)
T 4eb5_A 334 ACGLKHEEAHGTLLLTLGRYNTDEDVDRLLE-VLPGVIE 371 (382)
T ss_dssp HTTCCHHHHTTEEEEECCTTCCHHHHHHHHH-HHHHHHH
T ss_pred HcCCChhccCCeEEEECCCCCCHHHHHHHHH-HHHHHHH
Confidence 0 135789999999999999999998 7766543
No 57
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=96.36 E-value=0.021 Score=48.33 Aligned_cols=88 Identities=7% Similarity=-0.153 Sum_probs=58.5
Q ss_pred chHHHHHHHHHHHHHHHHHHhCCCcc-cCC--CCCC-eEEEEcCCc---hHHHhcc----ccccCCCCCCCCceEEEEee
Q psy5049 46 GIRRISVLAHNTRYFRRKLNRLGLIV-YGH--RDSP-VVPVLVFFF---SKVGQTS----IGLGVEQTALNDGLSLYESS 114 (153)
Q Consensus 46 ~~~rr~~L~~ni~~fr~~L~~~G~~~-~~~--s~SP-IiPV~~g~~---~~~~~~a----~~i~~PtVP~g~~RlRI~ls 114 (153)
.+++.++.++...++++.|.+.|+.. ... ..+| |+++.+.+. ....... +.++ +. ....+.+|+++.
T Consensus 286 ~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~gI~~~-~g-~~~~~~iRiS~~ 363 (386)
T 3qm2_A 286 VAAMHKINQQKAELLYGVIDNSDFYRNDVAQANRSRMNVPFQLADNTLDKVFLEESFAAGLHAL-KG-HRVVGGMRASIY 363 (386)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCSSEECCBCGGGBCSSEEEEEESSGGGHHHHHHHHHHTTEECC-BC-CTTTCSEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHcCceEEEEECCCccccHHHHHHHHHCCCEEe-CC-CCCcCeEEEEcC
Confidence 46678889999999999999988621 111 2355 888888642 1221111 2222 21 111234999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHhc
Q psy5049 115 HLRSANLWNRPHSPSLMAVFRG 136 (153)
Q Consensus 115 A~HT~edId~L~~~~L~~~~~~ 136 (153)
..+|+||||++++ +|+++.+.
T Consensus 364 ~~~t~edId~l~~-~l~~~~~~ 384 (386)
T 3qm2_A 364 NAMPIEGVKALTD-FMIDFERR 384 (386)
T ss_dssp TTSCHHHHHHHHH-HHHHHHHH
T ss_pred CCCCHHHHHHHHH-HHHHHHHh
Confidence 9999999999999 88877654
No 58
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=96.35 E-value=0.0088 Score=48.66 Aligned_cols=89 Identities=8% Similarity=-0.039 Sum_probs=60.6
Q ss_pred hHHHHHHHHHHHHHHHHHHhCCCcccC-CCCCCeEEEEcCCc----hHHHhcc----ccccC---C---CCCCCCceEEE
Q psy5049 47 IRRISVLAHNTRYFRRKLNRLGLIVYG-HRDSPVVPVLVFFF----SKVGQTS----IGLGV---E---QTALNDGLSLY 111 (153)
Q Consensus 47 ~~rr~~L~~ni~~fr~~L~~~G~~~~~-~s~SPIiPV~~g~~----~~~~~~a----~~i~~---P---tVP~g~~RlRI 111 (153)
.++++++.++..++++.|.+.|+.+.. .+.++++.+.+.+. ..+.+.. +.+.+ | ..|.+...+||
T Consensus 288 ~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~iRi 367 (420)
T 3gbx_A 288 KVYQQQVAKNAKAMVEVFLNRGYKVVSGGTENHLFLLDLVDKNLTGKEADAALGRANITVNKNSVPNDPKSPFVTSGIRI 367 (420)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEECGGGTCCHHHHHHHHHHTTEECEEECCTTCSSCTTTCSEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCeeccCCCCCeEEEEEcCCCCCCHHHHHHHHHHCCcEeccccCCCCccccCCCcceEE
Confidence 677999999999999999999987642 24678888887532 2222222 22222 2 22344456999
Q ss_pred EeeCC----CCHHHHHHHHHHHHHHHHhc
Q psy5049 112 ESSHL----RSANLWNRPHSPSLMAVFRG 136 (153)
Q Consensus 112 ~lsA~----HT~edId~L~~~~L~~~~~~ 136 (153)
+++.. .+++|++++++ +++.+.+.
T Consensus 368 ~~~~~~~~~~~~~~i~~~~~-~l~~~l~~ 395 (420)
T 3gbx_A 368 GSPAVTRRGFKEAEVKELAG-WMCDVLDN 395 (420)
T ss_dssp ECHHHHHTTCCHHHHHHHHH-HHHHHHHT
T ss_pred ecchhcccCCCHHHHHHHHH-HHHHHHhC
Confidence 98765 56999999999 88766544
No 59
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=96.34 E-value=0.013 Score=47.46 Aligned_cols=89 Identities=8% Similarity=-0.040 Sum_probs=60.6
Q ss_pred hHHHHHHHHHHHHHHHHHHhCCCcccC-CCCCCeEEEEcCC----chHHHhcc----cccc---CC---CCCCCCceEEE
Q psy5049 47 IRRISVLAHNTRYFRRKLNRLGLIVYG-HRDSPVVPVLVFF----FSKVGQTS----IGLG---VE---QTALNDGLSLY 111 (153)
Q Consensus 47 ~~rr~~L~~ni~~fr~~L~~~G~~~~~-~s~SPIiPV~~g~----~~~~~~~a----~~i~---~P---tVP~g~~RlRI 111 (153)
++.+++++++..++.+.|++.|+.+.+ .+.++++.+-+.+ .....+.. +.++ .| .-+.....+|+
T Consensus 280 ~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~iRi 359 (407)
T 2dkj_A 280 KEYSRLVVENAKRLAEELARRGYRIVTGGTDNHLFLVDLRPKGLTGKEAEERLDAVGITVNKNAIPFDPKPPRVTSGIRI 359 (407)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEECGGGTCCHHHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHhCCceeecCCCCceEEEEECcccCCCHHHHHHHHHHcCceecCCcCccccccccCCCceee
Confidence 778999999999999999998887643 2467888887753 22222222 1111 11 01223457999
Q ss_pred EeeC----CCCHHHHHHHHHHHHHHHHhc
Q psy5049 112 ESSH----LRSANLWNRPHSPSLMAVFRG 136 (153)
Q Consensus 112 ~lsA----~HT~edId~L~~~~L~~~~~~ 136 (153)
+++. .+|++|++++++ +|+.+.+.
T Consensus 360 s~~~~~~~~~~~~~i~~~~~-~l~~~~~~ 387 (407)
T 2dkj_A 360 GTPAITTRGFTPEEMPLVAE-LIDRALLE 387 (407)
T ss_dssp ECHHHHHTTCCGGGHHHHHH-HHHHHHHH
T ss_pred ecccccccCCCHHHHHHHHH-HHHHHHhc
Confidence 9986 599999999999 78766544
No 60
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=96.33 E-value=0.02 Score=45.67 Aligned_cols=88 Identities=8% Similarity=-0.041 Sum_probs=57.5
Q ss_pred hHHHHHHHHHHHHHHHHHHhCCCcccCCC---CCCeEEEEcCC--chHHHhcc----ccccC-----C------------
Q psy5049 47 IRRISVLAHNTRYFRRKLNRLGLIVYGHR---DSPVVPVLVFF--FSKVGQTS----IGLGV-----E------------ 100 (153)
Q Consensus 47 ~~rr~~L~~ni~~fr~~L~~~G~~~~~~s---~SPIiPV~~g~--~~~~~~~a----~~i~~-----P------------ 100 (153)
++.+++++++..++.+.|.+.|+.+.... ...++.+.+.+ .....+.. +.+++ +
T Consensus 259 ~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~ 338 (384)
T 1eg5_A 259 SEAAKHMEKLRSKLVSGLMNLGAHIITPLEISLPNTLSVSFPNIRGSTLQNLLSGYGIYVSTSSACTSKDERLRHVLDAM 338 (384)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCEECSCTTSBCTTEEEEECTTCCHHHHHHHHHHTTEECBC------------CHHHHT
T ss_pred HHHHHHHHHHHHHHHHHhCCCCeEEeCCcccCCCCEEEEEeCCCCHHHHHHHHhhCCeEEeccccccCCCCcchHHHHHc
Confidence 57788899999999999998887653321 13466666642 22222222 22211 1
Q ss_pred CCC--CCCceEEEEeeCCCCHHHHHHHHHHHHHHHHh
Q psy5049 101 QTA--LNDGLSLYESSHLRSANLWNRPHSPSLMAVFR 135 (153)
Q Consensus 101 tVP--~g~~RlRI~lsA~HT~edId~L~~~~L~~~~~ 135 (153)
.+| .+...+||+++..+|+||++++++ +|+.+.+
T Consensus 339 g~~~~~~~~~iRi~~~~~~~~~~i~~~~~-~l~~~~~ 374 (384)
T 1eg5_A 339 GVDRRIAQGAIRISLCKYNTEEEVDYFLK-KIEEILS 374 (384)
T ss_dssp TCCHHHHHHEEEEECCTTCCHHHHHHHHH-HHHHHHH
T ss_pred CCChhhcCCeEEEECCCCCCHHHHHHHHH-HHHHHHH
Confidence 111 124789999999999999999999 7776654
No 61
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=96.33 E-value=0.022 Score=47.71 Aligned_cols=88 Identities=6% Similarity=-0.150 Sum_probs=59.1
Q ss_pred chHHHHHHHHHHHHHHHHHHhCC-C-cccCC--CCCC-eEEEEcCC--c--hHHHhcc--ccc-cCCCCCCCCceEEEEe
Q psy5049 46 GIRRISVLAHNTRYFRRKLNRLG-L-IVYGH--RDSP-VVPVLVFF--F--SKVGQTS--IGL-GVEQTALNDGLSLYES 113 (153)
Q Consensus 46 ~~~rr~~L~~ni~~fr~~L~~~G-~-~~~~~--s~SP-IiPV~~g~--~--~~~~~~a--~~i-~~PtVP~g~~RlRI~l 113 (153)
.+.+.++.++...++++.|.+.| + ..... ..+| |+++.+.+ . ....... ..| ..+. ....+.+|+++
T Consensus 259 ~~~i~~~~~~l~~~l~~~L~~~~g~~~~~~~~~~rs~~ivsf~~~~~~~~~~~~~~~L~~~gI~~~~g-~~~~g~iRiS~ 337 (361)
T 3m5u_A 259 LDKVHEKNSQKATMLYECIDLSNGFYKGHADKKDRSLMNVSFNIAKNKDLEPLFVKEAEEAGMIGLKG-HRILGGIRASI 337 (361)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSTTSEEESSCGGGBCSSEEEEEESSCTTHHHHHHHHHHHTTEECCBC-CTTTCSEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCeeeccCCHHHcCCeEEEEECCCchhhhHHHHHHHHHCCCEEecC-CCccCeEEEEc
Confidence 47788899999999999999987 4 33222 2245 88888875 1 1222222 111 1222 11124599999
Q ss_pred eCCCCHHHHHHHHHHHHHHHHh
Q psy5049 114 SHLRSANLWNRPHSPSLMAVFR 135 (153)
Q Consensus 114 sA~HT~edId~L~~~~L~~~~~ 135 (153)
.-.+|+||||++++ +|+.+.+
T Consensus 338 ~~~~t~edId~l~~-al~~~~~ 358 (361)
T 3m5u_A 338 YNALNLDQVKTLCE-FMKEFQG 358 (361)
T ss_dssp CTTSCHHHHHHHHH-HHHHHHH
T ss_pred cCCCCHHHHHHHHH-HHHHHHH
Confidence 99999999999999 8887764
No 62
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=96.30 E-value=0.0073 Score=50.77 Aligned_cols=86 Identities=8% Similarity=-0.118 Sum_probs=60.1
Q ss_pred chHHHHHHHHHHHHHHHHHHh-----------CCCcccCCCC----CCeEEEEcCC-chHHHhcc----ccccCCCCCCC
Q psy5049 46 GIRRISVLAHNTRYFRRKLNR-----------LGLIVYGHRD----SPVVPVLVFF-FSKVGQTS----IGLGVEQTALN 105 (153)
Q Consensus 46 ~~~rr~~L~~ni~~fr~~L~~-----------~G~~~~~~s~----SPIiPV~~g~-~~~~~~~a----~~i~~PtVP~g 105 (153)
.++.++++.++..++.+.|.+ .|+.+....+ .+++.+.+.. .....+.. +.++ ..+
T Consensus 354 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~p~~~~~~g~~~~~~~~~~~~~l~~~L~~~Gi~v~----~~~ 429 (465)
T 3e9k_A 354 MKALRKKSVLLTGYLEYLIKHNYGKDKAATKKPVVNIITPSHVEERGCQLTITFSVPNKDVFQELEKRGVVCD----KRN 429 (465)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCC---------CEEECSCSSGGGBCSCEEEEECCTTCCHHHHHHTTTEECE----EET
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccccccccCCCCeEEeCCCCHhhcccEEEEEecCCHHHHHHHHHHCCEEEe----cCC
Confidence 477899999999999999987 6776643221 6677776652 22333322 3333 223
Q ss_pred CceEEEEe-eCCCCHHHHHHHHHHHHHHHHhc
Q psy5049 106 DGLSLYES-SHLRSANLWNRPHSPSLMAVFRG 136 (153)
Q Consensus 106 ~~RlRI~l-sA~HT~edId~L~~~~L~~~~~~ 136 (153)
...+||++ +..+|++||+++++ +|+.+.+.
T Consensus 430 ~~~iRis~~~~~~t~edi~~~~~-~l~~~l~~ 460 (465)
T 3e9k_A 430 PNGIRVAPVPLYNSFHDVYKFTN-LLTSILDS 460 (465)
T ss_dssp TTEEEEBCCTTTCCHHHHHHHHH-HHHHHHTC
T ss_pred CCEEEEeCcccCCCHHHHHHHHH-HHHHHHHh
Confidence 57999998 89999999999999 78766543
No 63
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=96.27 E-value=0.027 Score=45.92 Aligned_cols=86 Identities=8% Similarity=-0.069 Sum_probs=55.8
Q ss_pred hHHHHHHHHHHHHHHHHHHhC---CCcccCCCCCCeEEEEcCC---chHHHhcc----ccc----cCCCCCCCCceEEEE
Q psy5049 47 IRRISVLAHNTRYFRRKLNRL---GLIVYGHRDSPVVPVLVFF---FSKVGQTS----IGL----GVEQTALNDGLSLYE 112 (153)
Q Consensus 47 ~~rr~~L~~ni~~fr~~L~~~---G~~~~~~s~SPIiPV~~g~---~~~~~~~a----~~i----~~PtVP~g~~RlRI~ 112 (153)
.+.+++++++..++.+.|.+. |+.+...+.+.++.+-+.+ .....+.. ..+ .|...+.+...+||+
T Consensus 291 ~~~~~~~~~~~~~l~~~L~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~f~~~~~~~~~iRis 370 (397)
T 2zyj_A 291 ERVRRVYREKAQAMLHALDREVPKEVRYTRPKGGMFVWMELPKGLSAEGLFRRALEENVAFVPGGPFFANGGGENTLRLS 370 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCTTSEECCCSBSSEEEEECSTTCCHHHHHHHHHHTTEEEEESGGGCTTSCCTTEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCeEEccCCccEEEEEEcCCCCCHHHHHHHHHHCCCEEechHHhcCCCCCCCeEEEE
Confidence 566788889999999999875 6765333445677666653 22222222 111 222223456889999
Q ss_pred eeCCCCHHHHHHHHHHHHHHHH
Q psy5049 113 SSHLRSANLWNRPHSPSLMAVF 134 (153)
Q Consensus 113 lsA~HT~edId~L~~~~L~~~~ 134 (153)
++.. |++||+++++ .|+.+.
T Consensus 371 ~~~~-~~~~i~~~~~-~l~~~l 390 (397)
T 2zyj_A 371 YATL-DREGIAEGVR-RLGRAL 390 (397)
T ss_dssp CSSS-CHHHHHHHHH-HHHHHH
T ss_pred cCCC-CHHHHHHHHH-HHHHHH
Confidence 9885 9999999988 776544
No 64
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=96.27 E-value=0.034 Score=44.92 Aligned_cols=84 Identities=11% Similarity=-0.002 Sum_probs=55.9
Q ss_pred hHHHHHHHHHHHHHHHHHHhCCCcccCCCCCCeEEEEcCCchHHHhcc----ccc----cCCCCCCCCceEEEEeeCCCC
Q psy5049 47 IRRISVLAHNTRYFRRKLNRLGLIVYGHRDSPVVPVLVFFFSKVGQTS----IGL----GVEQTALNDGLSLYESSHLRS 118 (153)
Q Consensus 47 ~~rr~~L~~ni~~fr~~L~~~G~~~~~~s~SPIiPV~~g~~~~~~~~a----~~i----~~PtVP~g~~RlRI~lsA~HT 118 (153)
++.+++++++..++.+.|++.|+.+.....+.++.+-+.+.+ +.... ..+ .|..-+.+...+||+++. |
T Consensus 277 ~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~-~~~~l~~~gi~v~~g~~~~~~~~~~~~iRi~~~~--~ 353 (381)
T 1v2d_A 277 EALREGYRRRRDLLAGGLRAMGLRVYVPEGTYFLMAELPGWD-AFRLVEEARVALIPASAFYLEDPPKDLFRFAFCK--T 353 (381)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCEECCSBSSEEEEECTTCC-HHHHHHHTCEECEEGGGGCSSSCCTTEEEEECCS--C
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCEecCCCcceEEEEecChHh-HHHHHHhCCEEEecchHhCCCCCCCCEEEEEeCC--C
Confidence 567889999999999999998987654333456555554332 32222 111 122113456789999987 9
Q ss_pred HHHHHHHHHHHHHHHH
Q psy5049 119 ANLWNRPHSPSLMAVF 134 (153)
Q Consensus 119 ~edId~L~~~~L~~~~ 134 (153)
++||+++++ .++.+.
T Consensus 354 ~~~i~~~~~-~l~~~l 368 (381)
T 1v2d_A 354 EEELHLALE-RLGRVV 368 (381)
T ss_dssp HHHHHHHHH-HHHHHC
T ss_pred HHHHHHHHH-HHHHHH
Confidence 999999888 776553
No 65
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=96.27 E-value=0.029 Score=45.25 Aligned_cols=90 Identities=11% Similarity=-0.010 Sum_probs=58.8
Q ss_pred chHHHHHHHHHHHHHHHHHHhCCCcccCCC--CCC-eEEEEcCC---chHHHhcc----ccccCCCC-CCCCceEEEEee
Q psy5049 46 GIRRISVLAHNTRYFRRKLNRLGLIVYGHR--DSP-VVPVLVFF---FSKVGQTS----IGLGVEQT-ALNDGLSLYESS 114 (153)
Q Consensus 46 ~~~rr~~L~~ni~~fr~~L~~~G~~~~~~s--~SP-IiPV~~g~---~~~~~~~a----~~i~~PtV-P~g~~RlRI~ls 114 (153)
.++.++++.++..++.+.|.+.|+.+.... .++ ++.+.+.+ .....+.. .....|.. +.+...+||+++
T Consensus 281 ~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~gi~v~~g~~~~~~~~~Ri~~~ 360 (393)
T 2huf_A 281 LPALIARHEDCAKRLYRGLQDAGFELYADPKDRLSTVTTIKVPQGVDWLKAAQYAMKTYLVEISGGLGPTAGQVFRIGLM 360 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCBSSCGGGBCTTEEEEECCTTCCHHHHHHHHHHHHCEECBCCCGGGTTTEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCeeccCccccCCcEEEEEcCCCCCHHHHHHHHHHhCCEEEecCcccccCCEEEEEcc
Confidence 356788999999999999998888764322 245 77777642 22222211 11122221 235678999996
Q ss_pred CC-CCHHHHHHHHHHHHHHHHhc
Q psy5049 115 HL-RSANLWNRPHSPSLMAVFRG 136 (153)
Q Consensus 115 A~-HT~edId~L~~~~L~~~~~~ 136 (153)
.. .++||++++++ +|+.+.+.
T Consensus 361 ~~~~~~e~i~~~~~-~l~~~~~~ 382 (393)
T 2huf_A 361 GQNATTERVDRVLQ-VFQEAVAA 382 (393)
T ss_dssp GGGCSHHHHHHHHH-HHHHHHHH
T ss_pred cCcCCHHHHHHHHH-HHHHHHHH
Confidence 64 57999999999 88766543
No 66
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=96.25 E-value=0.0085 Score=49.64 Aligned_cols=89 Identities=9% Similarity=-0.055 Sum_probs=52.7
Q ss_pred chHHHHHHHHHHHHHHHHHHhCC--Ccc--cCCCCCCeEEEEcCCc------------hHHHhcc-------ccccCCCC
Q psy5049 46 GIRRISVLAHNTRYFRRKLNRLG--LIV--YGHRDSPVVPVLVFFF------------SKVGQTS-------IGLGVEQT 102 (153)
Q Consensus 46 ~~~rr~~L~~ni~~fr~~L~~~G--~~~--~~~s~SPIiPV~~g~~------------~~~~~~a-------~~i~~PtV 102 (153)
.++.+++++++..++++.|.+.. +.. ...+...++.+.+.+. ....+.+ .+..++++
T Consensus 315 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~ 394 (430)
T 3i4j_A 315 REDLTGAAKERGAQLLAGLQALQARFPQMMQVRGTGLLLGVVLGDLATGQAFETPGIASRIGAAALKRGLITYPGSGAEP 394 (430)
T ss_dssp HTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETTEEEEEEC------------CHHHHHHHHHHTTEECC-------
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEEEEEEEEeccccccCCCccHHHHHHHHHHHHhCCCEEEecccccC
Confidence 46789999999999999998652 211 0123456777766431 1122211 22345677
Q ss_pred CCCCceEEEEeeCCCCHHHHHHHHHHHHHHHHh
Q psy5049 103 ALNDGLSLYESSHLRSANLWNRPHSPSLMAVFR 135 (153)
Q Consensus 103 P~g~~RlRI~lsA~HT~edId~L~~~~L~~~~~ 135 (153)
+.+...+||+++..+|+||++++++ +|+.+.+
T Consensus 395 ~~~~~~iRi~~~~~~t~e~i~~~l~-~l~~~l~ 426 (430)
T 3i4j_A 395 NGRGDHLLLGPPLSITAAEVDGLLA-LLAGALE 426 (430)
T ss_dssp ----CEEEECCCTTCCHHHHHHHHH-HHHHHHH
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHH-HHHHHHH
Confidence 7778899999999999999999998 7765543
No 67
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=96.23 E-value=0.026 Score=44.67 Aligned_cols=82 Identities=12% Similarity=0.101 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHHHHHHHHhC-CCcccCCCCCCeEEEEcCCchHHHhcc----ccccCCCCCCCCceEEEEeeCCCCHHHH
Q psy5049 48 RRISVLAHNTRYFRRKLNRL-GLIVYGHRDSPVVPVLVFFFSKVGQTS----IGLGVEQTALNDGLSLYESSHLRSANLW 122 (153)
Q Consensus 48 ~rr~~L~~ni~~fr~~L~~~-G~~~~~~s~SPIiPV~~g~~~~~~~~a----~~i~~PtVP~g~~RlRI~lsA~HT~edI 122 (153)
+.++++.++..++++.|.+. |+.+...+.++++.+-+. ....+.. ..+++...+ ...+|++++..+|++|+
T Consensus 264 ~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~--~~~~~~l~~~gi~v~~g~~~--~~~iRi~~~~~~~~~~i 339 (356)
T 1v72_A 264 RNARKANAAAQRLAQGLEGLGGVEVLGGTEANILFCRLD--SAMIDALLKAGFGFYHDRWG--PNVVRFVTSFATTAEDV 339 (356)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTTEEEESCCCSSEEEEEEC--HHHHHHHHHTTCBCBCSSSS--TTEEEEECCTTCCHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhCCCcEEccCCCccEEEEEcC--HHHHHHHHhcCeEEeccccC--CCeEEEEecCCCCHHHH
Confidence 46788899999999999884 776533455676665553 2222222 333322222 57899999999999999
Q ss_pred HHHHHHHHHHHH
Q psy5049 123 NRPHSPSLMAVF 134 (153)
Q Consensus 123 d~L~~~~L~~~~ 134 (153)
+++++ +|+.+.
T Consensus 340 ~~~~~-~l~~~l 350 (356)
T 1v72_A 340 DHLLN-QVRLAA 350 (356)
T ss_dssp HHHHH-HHHHTC
T ss_pred HHHHH-HHHHHH
Confidence 99888 776543
No 68
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=96.22 E-value=0.0097 Score=51.19 Aligned_cols=85 Identities=8% Similarity=-0.028 Sum_probs=57.1
Q ss_pred hHHHHHHHHHHHHHHHHHHhC-CCcccCCCCCCeEEEE-cCCchH----------------HHhcc-------ccccCCC
Q psy5049 47 IRRISVLAHNTRYFRRKLNRL-GLIVYGHRDSPVVPVL-VFFFSK----------------VGQTS-------IGLGVEQ 101 (153)
Q Consensus 47 ~~rr~~L~~ni~~fr~~L~~~-G~~~~~~s~SPIiPV~-~g~~~~----------------~~~~a-------~~i~~Pt 101 (153)
++++++++++..++.+.|++. |+.+. .+++.++.+. +..+.. +..+. .+...+.
T Consensus 383 ~~~~~~l~~~~~~l~~~L~~~~g~~~~-~~~g~~~~~~~~~lp~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~ 461 (500)
T 3tcm_A 383 DGILASLARRAKALEHAFNKLEGITCN-EAEGAMYVFPQICLPQKAIEAAKAANKAPDAFYALRLLESTGIVVVPGSGFG 461 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSTTEECC-CCCBTTEECCEECCCHHHHHHHHHHTSCHHHHHHHHHHHHHCEECEESTTTC
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCcEEe-cCCeEEEEeeeecCchhhHHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccC
Confidence 567788999999999999988 77663 3555554432 221211 11221 2334455
Q ss_pred CCCCCceEEEEeeCCCCHHHHHHHHHHHHHHHHh
Q psy5049 102 TALNDGLSLYESSHLRSANLWNRPHSPSLMAVFR 135 (153)
Q Consensus 102 VP~g~~RlRI~lsA~HT~edId~L~~~~L~~~~~ 135 (153)
++.|+..+|++++ +++++|+++++ .|..+.+
T Consensus 462 ~~~g~~~iRis~~--~~~e~i~~~i~-~l~~~~~ 492 (500)
T 3tcm_A 462 QVPGTWHFRCTIL--PQEDKIPAVIS-RFTVFHE 492 (500)
T ss_dssp CCTTCCBEEEESC--SCTTTHHHHHH-HHHHHHH
T ss_pred CCCCCCEEEEEEC--CCHHHHHHHHH-HHHHHHH
Confidence 5678889999999 99999999888 7765543
No 69
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=96.18 E-value=0.023 Score=45.59 Aligned_cols=82 Identities=9% Similarity=-0.034 Sum_probs=57.4
Q ss_pred hHHHHHHHHHHHHHHHHHHhC-CCcccCCCCCCeEEEEcCCchHHHhcc----ccccCCC---CCCCCceEEEEeeCCCC
Q psy5049 47 IRRISVLAHNTRYFRRKLNRL-GLIVYGHRDSPVVPVLVFFFSKVGQTS----IGLGVEQ---TALNDGLSLYESSHLRS 118 (153)
Q Consensus 47 ~~rr~~L~~ni~~fr~~L~~~-G~~~~~~s~SPIiPV~~g~~~~~~~~a----~~i~~Pt---VP~g~~RlRI~lsA~HT 118 (153)
.+++++++++..++.+.|.+. |+.+. .+.+..+.+-+.+.....+.. +.++ |. -+.+...+||+++ |
T Consensus 276 ~~~~~~~~~~~~~l~~~l~~~~g~~~~-~~~~~~~~~~~~~~~~l~~~l~~~gi~v~-~~~~~~~~~~~~iRis~~---~ 350 (367)
T 3euc_A 276 DEQAAQLRAERSRVAEGMAAHGGVTVF-PSAANFLLARVPDAAQTFDRLLARKVLIK-NVSKMHPLLANCLRVTVS---T 350 (367)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSTTCEEC-CCSSSEEEEECSCHHHHHHHHHTTTEECE-ECGGGCGGGTTEEEEECC---C
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCcEEC-CCCCeEEEEECCCHHHHHHHHHHCCeEEE-ECCccCCCCCCEEEEecC---C
Confidence 678889999999999999988 77653 455677777666444444332 2221 11 1345689999976 9
Q ss_pred HHHHHHHHHHHHHHHH
Q psy5049 119 ANLWNRPHSPSLMAVF 134 (153)
Q Consensus 119 ~edId~L~~~~L~~~~ 134 (153)
++|++++++ +|+.+.
T Consensus 351 ~~~i~~~~~-~l~~~l 365 (367)
T 3euc_A 351 PEENAQFLE-AFAASL 365 (367)
T ss_dssp HHHHHHHHH-HHHHHT
T ss_pred HHHHHHHHH-HHHHHh
Confidence 999999998 776653
No 70
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=96.14 E-value=0.015 Score=47.92 Aligned_cols=88 Identities=10% Similarity=-0.053 Sum_probs=58.0
Q ss_pred chHHHHHHHHHHHHHHHHHHhCCCccc------CC-CCCCeEEEEcC--CchHHHhcc---ccccCCCCCCC---CceEE
Q psy5049 46 GIRRISVLAHNTRYFRRKLNRLGLIVY------GH-RDSPVVPVLVF--FFSKVGQTS---IGLGVEQTALN---DGLSL 110 (153)
Q Consensus 46 ~~~rr~~L~~ni~~fr~~L~~~G~~~~------~~-s~SPIiPV~~g--~~~~~~~~a---~~i~~PtVP~g---~~RlR 110 (153)
..+++++++++..++.+.|.+.|+.+. .. ..+.++.+-+. +.....+.. .....|..+.+ ...+|
T Consensus 333 ~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gi~v~~~~~~~~~~~~~iR 412 (437)
T 3g0t_A 333 FRDSVIEYGRKARIMKKMFLDNGFNIVYDKDGNEPLADGFYFTVGYKGMDSSKLIEKFVRYGMCAITLKTTGSKRNEAMR 412 (437)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTEEESSCEETTEECCSSSEEEEEETTCCHHHHHHHHHHTTEECEESTTTTCCCTTCEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCEEeccccCCCCCceeEEEEEecCCCCHHHHHHHHHHcCeEEeeccccCCCCCCEEE
Confidence 567899999999999999999888764 12 44566666554 223333322 11122332222 25699
Q ss_pred EEeeCCCCHHHHHHHHHHHHHHHHh
Q psy5049 111 YESSHLRSANLWNRPHSPSLMAVFR 135 (153)
Q Consensus 111 I~lsA~HT~edId~L~~~~L~~~~~ 135 (153)
|+++.. |++||+++++ +|..+.+
T Consensus 413 is~~~~-~~e~i~~~~~-~l~~~~~ 435 (437)
T 3g0t_A 413 ICTSLL-PESQFPDLEK-RLQMLNA 435 (437)
T ss_dssp EECSSS-CGGGHHHHHH-HHHHHHH
T ss_pred EEEecC-CHHHHHHHHH-HHHHHHh
Confidence 999954 9999999998 7776654
No 71
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=96.14 E-value=0.01 Score=49.85 Aligned_cols=85 Identities=5% Similarity=-0.106 Sum_probs=58.9
Q ss_pred hHHHHHHHHHHHHHHHHHHhC--CCcccC--CCCCCeEEEEcCCc----hHHHhcc---ccccCCCCCCCCceEEEEeeC
Q psy5049 47 IRRISVLAHNTRYFRRKLNRL--GLIVYG--HRDSPVVPVLVFFF----SKVGQTS---IGLGVEQTALNDGLSLYESSH 115 (153)
Q Consensus 47 ~~rr~~L~~ni~~fr~~L~~~--G~~~~~--~s~SPIiPV~~g~~----~~~~~~a---~~i~~PtVP~g~~RlRI~lsA 115 (153)
.+..++++++..++++.|++. ++.... .+...++.|.+.+. ....... ..+..|. +...+|++++.
T Consensus 332 ~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~l~~~Gv~v~~~---~~~~iRi~~~~ 408 (433)
T 1z7d_A 332 EKLCENAEKLGGPFLENLKRELKDSKIVRDVRGKGLLCAIEFKNELVNVLDICLKLKENGLITRDV---HDKTIRLTPPL 408 (433)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEETTEEEEEECTTTCCHHHHHHHHHHTTEECCEE---TTTEEEECCCT
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeeeeEEEEEEccChhHHHHHHHHHHHCCeEEecC---CCCEEEEECCc
Confidence 468899999999999999876 553211 24467888887643 1222222 2222332 56899999999
Q ss_pred CCCHHHHHHHHHHHHHHHHh
Q psy5049 116 LRSANLWNRPHSPSLMAVFR 135 (153)
Q Consensus 116 ~HT~edId~L~~~~L~~~~~ 135 (153)
.+|+|||+++++ +++.+.+
T Consensus 409 ~~t~e~i~~~l~-~l~~~l~ 427 (433)
T 1z7d_A 409 CITKEQLDECTE-IIVKTVK 427 (433)
T ss_dssp TCCHHHHHHHHH-HHHHHHH
T ss_pred CCCHHHHHHHHH-HHHHHHH
Confidence 999999999998 7766543
No 72
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=96.13 E-value=0.025 Score=46.81 Aligned_cols=87 Identities=6% Similarity=-0.158 Sum_probs=56.8
Q ss_pred chHHHHHHHHHHHHHHHHHHhC-----CCcccCCCCCCeEEEEcCC---chHHHhcc----cc----ccCCCCCCCCceE
Q psy5049 46 GIRRISVLAHNTRYFRRKLNRL-----GLIVYGHRDSPVVPVLVFF---FSKVGQTS----IG----LGVEQTALNDGLS 109 (153)
Q Consensus 46 ~~~rr~~L~~ni~~fr~~L~~~-----G~~~~~~s~SPIiPV~~g~---~~~~~~~a----~~----i~~PtVP~g~~Rl 109 (153)
..+.+++++++..++.+.|.+. |+.+...+.+.++.+-+.+ .....+.. +. ..|...+.+...+
T Consensus 313 ~~~~~~~~~~~~~~l~~~L~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~f~~~~~~~~~i 392 (425)
T 1vp4_A 313 LKPTIELYRRKRTVMLNALEEYFSDIPGVKWVKSEGGLFIWLTLPEGFDTWEMFEYAKRKKVFYVPGRVFKVYDEPSPSM 392 (425)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHSTTSTTCEECCCSBSSEEEEECCTTCCTTTTHHHHHHHTEECEEGGGGCTTCCCCSEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCCccEEEEEEcCCCCCHHHHHHHHHHCCCEEECchhhcCCCCCCCeE
Confidence 3567888899999999999875 6665333446677777653 22222211 11 1232223456889
Q ss_pred EEEeeCCCCHHHHHHHHHHHHHHHH
Q psy5049 110 LYESSHLRSANLWNRPHSPSLMAVF 134 (153)
Q Consensus 110 RI~lsA~HT~edId~L~~~~L~~~~ 134 (153)
||+++.. |++|++++++ .|+.+.
T Consensus 393 Ris~~~~-~~e~i~~~l~-~l~~~l 415 (425)
T 1vp4_A 393 RLSFCLP-PDEKIVEGIK-RLREVV 415 (425)
T ss_dssp EEECSSS-CHHHHHHHHH-HHHHHH
T ss_pred EEEeCCC-CHHHHHHHHH-HHHHHH
Confidence 9999874 9999999988 776554
No 73
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=96.13 E-value=0.035 Score=44.42 Aligned_cols=89 Identities=11% Similarity=0.068 Sum_probs=57.8
Q ss_pred hHHHHHHHHHHHHHHHHHHhCCCcccCCC---CCC-eEEEEcCC---chHHHhcc-----ccccCCCCCCCCceEEEEee
Q psy5049 47 IRRISVLAHNTRYFRRKLNRLGLIVYGHR---DSP-VVPVLVFF---FSKVGQTS-----IGLGVEQTALNDGLSLYESS 114 (153)
Q Consensus 47 ~~rr~~L~~ni~~fr~~L~~~G~~~~~~s---~SP-IiPV~~g~---~~~~~~~a-----~~i~~PtVP~g~~RlRI~ls 114 (153)
++.++++.++..++.+.|.+.|+.+.... .++ ++.+.+.+ .....+.. +.+++-..+.+...+||+++
T Consensus 286 ~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~ 365 (393)
T 3kgw_A 286 ENCWRRHREATAHLHKHLQEMGLKFFVKDPEIRLPTITTVTVPAGYNWRDIVSYVLDHFSIEISGGLGPTEERVLRIGLL 365 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCBSSSSGGGBCSSEEEEECCTTBCHHHHHHHHHHHHCEECBCCCGGGTTTEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCeeccCChhhcCCeEEEEeCCCCCCHHHHHHHHHHhCCEEEeCCcccCCCCEEEEEec
Confidence 67789999999999999999888664211 133 44455542 22222221 22232222445678999985
Q ss_pred C-CCCHHHHHHHHHHHHHHHHhc
Q psy5049 115 H-LRSANLWNRPHSPSLMAVFRG 136 (153)
Q Consensus 115 A-~HT~edId~L~~~~L~~~~~~ 136 (153)
+ ..|++|++++++ +|+.+.+.
T Consensus 366 ~~~~~~~~i~~~~~-~l~~~l~~ 387 (393)
T 3kgw_A 366 GYNATTENVDRVAE-ALREALQH 387 (393)
T ss_dssp GGGCCHHHHHHHHH-HHHHHHHH
T ss_pred ccCCCHHHHHHHHH-HHHHHHHh
Confidence 5 569999999999 88766554
No 74
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=96.12 E-value=0.037 Score=43.90 Aligned_cols=88 Identities=14% Similarity=0.073 Sum_probs=55.7
Q ss_pred hHHHHHHHHHHHHHHHHHHhC-CCcccCCC--CCC-eEEEEcCC--chHHHhcc----ccccC---CCCC----------
Q psy5049 47 IRRISVLAHNTRYFRRKLNRL-GLIVYGHR--DSP-VVPVLVFF--FSKVGQTS----IGLGV---EQTA---------- 103 (153)
Q Consensus 47 ~~rr~~L~~ni~~fr~~L~~~-G~~~~~~s--~SP-IiPV~~g~--~~~~~~~a----~~i~~---PtVP---------- 103 (153)
++.+++++++..++.+.|.+. |+.+.... ..| ++.+.+.+ .....+.. +.+++ ...+
T Consensus 255 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~ 334 (382)
T 4hvk_A 255 REEAERLRRLRDRIIDNVLKIEESYLNGHPEKRLPNNVNVRFSYIEGESIVLSLDMAGIQASTGSACSSKTLQPSHVLMA 334 (382)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSTTEEECSCSSSBCTTEEEEEETTCCHHHHHHHHHHTTCBCBCC--------CCCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCeEEeCCccccCCCEEEEEECCCCHHHHHHHHHHCCEEEeeCCccCCCCCcchHHHHH
Confidence 677888999999999999976 66543221 123 66666643 22233222 22211 1111
Q ss_pred CC------CceEEEEeeCCCCHHHHHHHHHHHHHHHHh
Q psy5049 104 LN------DGLSLYESSHLRSANLWNRPHSPSLMAVFR 135 (153)
Q Consensus 104 ~g------~~RlRI~lsA~HT~edId~L~~~~L~~~~~ 135 (153)
.| ...+|++++..+|+||++++++ +|+.+.+
T Consensus 335 ~g~~~~~~~~~iRl~~~~~~t~e~i~~~~~-~l~~~~~ 371 (382)
T 4hvk_A 335 CGLKHEEAHGTLLLTLGRYNTDEDVDRLLE-VLPGVIE 371 (382)
T ss_dssp TTCCHHHHHTEEEEECCTTCCHHHHHHHHH-HHHHHHH
T ss_pred cCCChhhcCCeEEEEcCCCCCHHHHHHHHH-HHHHHHH
Confidence 01 5789999999999999999999 7776554
No 75
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=96.12 E-value=0.014 Score=48.84 Aligned_cols=88 Identities=11% Similarity=-0.027 Sum_probs=57.4
Q ss_pred chHHHHHHHHHHHHHHHHHHhC--CCccc--CCCCCCeEEEEcCCc---------hHHHhcc----------ccccCCCC
Q psy5049 46 GIRRISVLAHNTRYFRRKLNRL--GLIVY--GHRDSPVVPVLVFFF---------SKVGQTS----------IGLGVEQT 102 (153)
Q Consensus 46 ~~~rr~~L~~ni~~fr~~L~~~--G~~~~--~~s~SPIiPV~~g~~---------~~~~~~a----------~~i~~PtV 102 (153)
.++..++++++..++++.|.+. ++... ..+...++.+.+..+ ..+..+. .+..+| +
T Consensus 340 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~-~ 418 (452)
T 3n5m_A 340 NENLIERSAQMGSLLLEQLKEEIGEHPLVGDIRGKGLLVGIELVNDKETKEPIDNDKIASVVNACKEKGLIIGRNGMT-T 418 (452)
T ss_dssp HTTHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEESSSCEEEEEEEETTTTEECCHHHHHHHHHHHHHTTEECEECTTS-S
T ss_pred hccHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEEEEEEEEEEecCCcccCCCCHHHHHHHHHHHHHCCcEEeecCcc-c
Confidence 4678899999999999999865 32210 113344555554221 1111221 333444 4
Q ss_pred CCCCceEEEEeeCCCCHHHHHHHHHHHHHHHHh
Q psy5049 103 ALNDGLSLYESSHLRSANLWNRPHSPSLMAVFR 135 (153)
Q Consensus 103 P~g~~RlRI~lsA~HT~edId~L~~~~L~~~~~ 135 (153)
+.+...+||+++..+|+|||+++++ +|+.+.+
T Consensus 419 ~~~~~~iRi~~~~~~t~e~i~~~l~-~l~~~l~ 450 (452)
T 3n5m_A 419 AGYNNILTLAPPLVISSEEIAFVIG-TLKTAME 450 (452)
T ss_dssp TTCCCEEEECCCTTCCHHHHHHHHH-HHHHHHT
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHH-HHHHHHH
Confidence 6678999999999999999999998 7776543
No 76
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=96.12 E-value=0.016 Score=46.98 Aligned_cols=88 Identities=8% Similarity=-0.000 Sum_probs=57.2
Q ss_pred chHHHHHHHHHHHHHHHHHHhC-CCcccCC------CCCCeEEEEcCCc-----hHHHhcc----ccc--cC-CC-----
Q psy5049 46 GIRRISVLAHNTRYFRRKLNRL-GLIVYGH------RDSPVVPVLVFFF-----SKVGQTS----IGL--GV-EQ----- 101 (153)
Q Consensus 46 ~~~rr~~L~~ni~~fr~~L~~~-G~~~~~~------s~SPIiPV~~g~~-----~~~~~~a----~~i--~~-Pt----- 101 (153)
-.+.+++.+++..++.+.|++. |+.+.+. ..+.++++.+.+. ....+.. +.+ .| |.
T Consensus 252 l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~ 331 (388)
T 1b9h_A 252 LDEQIAVRDERWTLLSRLLGAIDGVVPQGGDVRADRNSHYMAMFRIPGLTEERRNALVDRLVEAGLPAFAAFRAIYRTDA 331 (388)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSTTCEECCCCTTCCBCCCSEEEEECTTCCHHHHHHHHHHHHHTTCCEEECCCCGGGSHH
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCccccCCCcCCCccceEEEEEEeCCcCcccHHHHHHHHHHCCCCcccccCccccChH
Confidence 3567788889999999999987 7655331 2256888888642 1222211 111 22 21
Q ss_pred -----CCCC----------------CceEEEEeeCCC-CHHHHHHHHHHHHHHHH
Q psy5049 102 -----TALN----------------DGLSLYESSHLR-SANLWNRPHSPSLMAVF 134 (153)
Q Consensus 102 -----VP~g----------------~~RlRI~lsA~H-T~edId~L~~~~L~~~~ 134 (153)
++.. ...+|++++..+ |+|||+++++ +++.+.
T Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~t~edi~~~~~-~l~~~~ 385 (388)
T 1b9h_A 332 FWELGAPDESVDAIARRCPNTDAISSDCVWLHHRVLLAGEPELHATAE-IIADAV 385 (388)
T ss_dssp HHHSSCCSSCHHHHHHTCHHHHHHHHHEEEEEGGGGGSCHHHHHHHHH-HHHHHH
T ss_pred hHhcCCCcccccccccCCHHHHHHHhCeEEecCCCCCCCHHHHHHHHH-HHHHHH
Confidence 1110 135999999999 9999999999 777654
No 77
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=96.09 E-value=0.014 Score=47.47 Aligned_cols=83 Identities=8% Similarity=-0.038 Sum_probs=57.9
Q ss_pred hHHHHHHHHHHHHHHHHHHhCCCccc--CCCCCCeEEEEcCC-chHHHhcc--cc-ccCCCCCCCCceEEEEeeCCCCHH
Q psy5049 47 IRRISVLAHNTRYFRRKLNRLGLIVY--GHRDSPVVPVLVFF-FSKVGQTS--IG-LGVEQTALNDGLSLYESSHLRSAN 120 (153)
Q Consensus 47 ~~rr~~L~~ni~~fr~~L~~~G~~~~--~~s~SPIiPV~~g~-~~~~~~~a--~~-i~~PtVP~g~~RlRI~lsA~HT~e 120 (153)
++.+++++++..++++.|.+.+.... ..+.+.++.+.+.+ .....+.. .. ...| -+...+||+++..+|+|
T Consensus 302 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~l~~~gi~v~~---~~~~~iRi~~~~~~~~~ 378 (392)
T 3ruy_A 302 EKLTERSLQLGEKLVGQLKEIDNPMITEVRGKGLFIGIELNEPARPYCEQLKAAGLLCKE---THENVIRIAPPLVISEE 378 (392)
T ss_dssp TTHHHHHHHHHHHHHHHHTTCCCTTEEEEEEETTEEEEEESSCSHHHHHHHHTTTEECCC---BTTTEEEECCCTTCCHH
T ss_pred hhHHHHHHHHHHHHHHHHHHhcCCCceEEEeeeeEEEEEEcchHHHHHHHHHHCCcEEec---CCCCEEEEECCCCCCHH
Confidence 67899999999999999998864221 12346777777653 23333222 22 2223 34689999999999999
Q ss_pred HHHHHHHHHHHHH
Q psy5049 121 LWNRPHSPSLMAV 133 (153)
Q Consensus 121 dId~L~~~~L~~~ 133 (153)
|++++++ +|+.+
T Consensus 379 ~i~~~~~-~l~~~ 390 (392)
T 3ruy_A 379 DLEWAFQ-KIKAV 390 (392)
T ss_dssp HHHHHHH-HHHHH
T ss_pred HHHHHHH-HHHHH
Confidence 9999988 77654
No 78
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=96.01 E-value=0.048 Score=44.28 Aligned_cols=90 Identities=6% Similarity=-0.126 Sum_probs=60.8
Q ss_pred chHHHHHHHHHHHHHHHHHHhCCCcccC-CCCCCeEEEEcCC----chHHHhcc-------ccccCCCC---CCCCceEE
Q psy5049 46 GIRRISVLAHNTRYFRRKLNRLGLIVYG-HRDSPVVPVLVFF----FSKVGQTS-------IGLGVEQT---ALNDGLSL 110 (153)
Q Consensus 46 ~~~rr~~L~~ni~~fr~~L~~~G~~~~~-~s~SPIiPV~~g~----~~~~~~~a-------~~i~~PtV---P~g~~RlR 110 (153)
..++++++.++..++.+.|.+.|+.+.. .+.++++.+.+.. ...+.+.. ....+|.. |.+...+|
T Consensus 280 ~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~~r 359 (417)
T 3n0l_A 280 WKVYAKQVRTNAQVLANVLMDRKFKLVSDGTDNHLVLMSFLDREFSGKDADLALGNAGITANKNTVPGEIRSPFITSGLR 359 (417)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEECTTSSSCHHHHHHHHHHTTEECEECCCTTCCSCTTTCSEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCceeccCCCCceEEEEEcccCCCCHHHHHHHHHHcCeEEeccccCCCCcccCCCCeeE
Confidence 3678889999999999999998886532 2446677776642 22333322 22233433 34557899
Q ss_pred EEeeC----CCCHHHHHHHHHHHHHHHHhc
Q psy5049 111 YESSH----LRSANLWNRPHSPSLMAVFRG 136 (153)
Q Consensus 111 I~lsA----~HT~edId~L~~~~L~~~~~~ 136 (153)
++.+. .+|++||+++++ +|+.+.+.
T Consensus 360 i~~~~~~~~~~~~~~i~~~~~-~l~~~l~~ 388 (417)
T 3n0l_A 360 LGTPALTARGFKEKEMEIVSN-YIADILDD 388 (417)
T ss_dssp EECHHHHHTTCCHHHHHHHHH-HHHHHHHT
T ss_pred ecCHHHhhCCCCHHHHHHHHH-HHHHHHhc
Confidence 98754 478999999999 88766654
No 79
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=96.01 E-value=0.018 Score=49.35 Aligned_cols=89 Identities=13% Similarity=0.032 Sum_probs=60.3
Q ss_pred chHHHHHHHHHHHHHHHHHHhCCCcccCC-CCCCeEEEEcC----CchHHHhcc----ccccC---C--CCCCCCceEEE
Q psy5049 46 GIRRISVLAHNTRYFRRKLNRLGLIVYGH-RDSPVVPVLVF----FFSKVGQTS----IGLGV---E--QTALNDGLSLY 111 (153)
Q Consensus 46 ~~~rr~~L~~ni~~fr~~L~~~G~~~~~~-s~SPIiPV~~g----~~~~~~~~a----~~i~~---P--tVP~g~~RlRI 111 (153)
.++.++++.+|..++.+.|.+.|+.+... ++++.+.|-+. +...+.+.. +.+.. | ..|.+.+.+||
T Consensus 323 ~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~g~~~~~~~~~L~~~gI~v~~~~~pg~~~~~~~~~iRi 402 (483)
T 1rv3_A 323 FKEYQRQVVANCRALSAALVELGYKIVTGGSDNHLILVDLRSKGTDGGRAEKVLEACSIACNKNTCPGDKSALRPSGLRL 402 (483)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEEGGGGTCCHHHHHHHHHHTTEECEEECCSSCSCTTSCCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCEeccCCCCCceEEEeccCCCCCHHHHHHHHHhCCcEEecCCCCCCCcCCCCceEEe
Confidence 36788999999999999999999876432 23455555553 222333322 22221 3 23567789999
Q ss_pred EeeCCCC----HHHHHHHHHHHHHHHHh
Q psy5049 112 ESSHLRS----ANLWNRPHSPSLMAVFR 135 (153)
Q Consensus 112 ~lsA~HT----~edId~L~~~~L~~~~~ 135 (153)
++.+.+| ++|++++++ +|..+.+
T Consensus 403 s~~~~~t~g~~~edi~~~~~-~l~~~l~ 429 (483)
T 1rv3_A 403 GTPALTSRGLLEKDFQKVAH-FIHRGIE 429 (483)
T ss_dssp ECHHHHHTTCCHHHHHHHHH-HHHHHHH
T ss_pred ecCCcccCCCCHHHHHHHHH-HHHHHHH
Confidence 9987777 999999998 7766543
No 80
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=95.99 E-value=0.033 Score=45.70 Aligned_cols=82 Identities=4% Similarity=-0.064 Sum_probs=54.5
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCcccCCCCCCeEE-EEcCCchHHHhcc---ccccCCCCCCCCceEEEEeeCCCCHHHHH
Q psy5049 48 RRISVLAHNTRYFRRKLNRLGLIVYGHRDSPVVP-VLVFFFSKVGQTS---IGLGVEQTALNDGLSLYESSHLRSANLWN 123 (153)
Q Consensus 48 ~rr~~L~~ni~~fr~~L~~~G~~~~~~s~SPIiP-V~~g~~~~~~~~a---~~i~~PtVP~g~~RlRI~lsA~HT~edId 123 (153)
+.+++++++..++.+.|.+.|+.+.. +....+- +-+.+.....+.. .....| |...+||+++ .+|+++|+
T Consensus 329 ~~~~~~~~~~~~l~~~L~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~----g~~~iRis~~-~~~~~~i~ 402 (418)
T 3rq1_A 329 CYYQLIRDRADIFKQEAAQVGLPMLP-YRGGFFITIPTDSANAICEELKKEHIYVIA----LANGIRIAAC-GIPKCQMT 402 (418)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCCCC-CCSSSEEEEECTTHHHHHHHHHHTTEECEE----CSSEEEEEGG-GSCHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCC-CCceEEEEcCCCCHHHHHHHHHhCCEEEec----CCCCeEEEEe-cCCHHHHH
Confidence 55788899999999999988987643 4444332 2233444433333 222333 3567999977 68999999
Q ss_pred HHHHHHHHHHHhc
Q psy5049 124 RPHSPSLMAVFRG 136 (153)
Q Consensus 124 ~L~~~~L~~~~~~ 136 (153)
++++ .|+.+.+.
T Consensus 403 ~~~~-~l~~~l~~ 414 (418)
T 3rq1_A 403 GLAE-KIYNAMKS 414 (418)
T ss_dssp THHH-HHHHHHHH
T ss_pred HHHH-HHHHHHHH
Confidence 9998 77766544
No 81
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=95.99 E-value=0.031 Score=51.35 Aligned_cols=32 Identities=13% Similarity=0.033 Sum_probs=28.0
Q ss_pred CCCceEEEEeeCCCCHHHHHHHHHHHHHHHHhc
Q psy5049 104 LNDGLSLYESSHLRSANLWNRPHSPSLMAVFRG 136 (153)
Q Consensus 104 ~g~~RlRI~lsA~HT~edId~L~~~~L~~~~~~ 136 (153)
.+..++|+++|..+|++|++++++ +|..+.+.
T Consensus 534 ~~~~~ir~~~s~g~t~e~i~~Ll~-aL~~i~~~ 565 (730)
T 1c4k_A 534 SDLNSILFLMTPAETPAKMNNLIT-QLLQLQRL 565 (730)
T ss_dssp ECSSEEEEECCTTCCHHHHHHHHH-HHHHHHHH
T ss_pred CCCCeEEEEeCCCCCHHHHHHHHH-HHHHHHHh
Confidence 367899999999999999999999 88777653
No 82
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=95.98 E-value=0.044 Score=44.23 Aligned_cols=82 Identities=13% Similarity=-0.038 Sum_probs=57.0
Q ss_pred hHHHHHHHHHHHHHHHHHHhCCCcccCCCCCCeEEEEcC-CchHHHhcc---ccccCCCCCCCCceEEEEeeCCCCHHHH
Q psy5049 47 IRRISVLAHNTRYFRRKLNRLGLIVYGHRDSPVVPVLVF-FFSKVGQTS---IGLGVEQTALNDGLSLYESSHLRSANLW 122 (153)
Q Consensus 47 ~~rr~~L~~ni~~fr~~L~~~G~~~~~~s~SPIiPV~~g-~~~~~~~~a---~~i~~PtVP~g~~RlRI~lsA~HT~edI 122 (153)
++.+++++++..++.+.|.+.|+.+. .+.++++.+-++ +.....+.. .....|. .....+||+++ |++|+
T Consensus 281 ~~~~~~~~~~~~~l~~~L~~~g~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~~--~~~~~iRis~~---~~~~i 354 (369)
T 3cq5_A 281 LGTVEKLSVERVRVAARLEELGYAVV-PSESNFVFFGDFSDQHAAWQAFLDRGVLIRDV--GIAGHLRTTIG---VPEEN 354 (369)
T ss_dssp HTHHHHHHHHHHHHHHHHHHHTCEEE-CCSSSEEEEECCSSHHHHHHHHHHTTEECBCC--SCTTEEEEECC---CHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCEEC-CCCCeEEEEECCCCHHHHHHHHHHCCEEEEEC--CCCCeEEEEeC---CHHHH
Confidence 56788999999999999998888764 456788777665 333333322 2223333 12468999997 89999
Q ss_pred HHHHHHHHHHHHh
Q psy5049 123 NRPHSPSLMAVFR 135 (153)
Q Consensus 123 d~L~~~~L~~~~~ 135 (153)
+++++ +|+.+.+
T Consensus 355 ~~~~~-~l~~~~~ 366 (369)
T 3cq5_A 355 DAFLD-AAAEIIK 366 (369)
T ss_dssp HHHHH-HHHHHHT
T ss_pred HHHHH-HHHHHHh
Confidence 99998 7776643
No 83
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=95.97 E-value=0.044 Score=46.33 Aligned_cols=89 Identities=7% Similarity=-0.063 Sum_probs=59.8
Q ss_pred chHHHHHHHHHHHHHHHHHHhC-CCcccCC---CCCC-eEEEEcCC----ch---HHHhcc---ccccCCCCCCCCceEE
Q psy5049 46 GIRRISVLAHNTRYFRRKLNRL-GLIVYGH---RDSP-VVPVLVFF----FS---KVGQTS---IGLGVEQTALNDGLSL 110 (153)
Q Consensus 46 ~~~rr~~L~~ni~~fr~~L~~~-G~~~~~~---s~SP-IiPV~~g~----~~---~~~~~a---~~i~~PtVP~g~~RlR 110 (153)
-+.+.++.+++..++++.|.+. |+.+... ..|| |+++.+.+ .. ...... .....+.- ...+.+|
T Consensus 271 ~~~i~~~~~~l~~~l~~~L~~~~g~~~~~~~~~~rs~~ivsf~~~~~~~~~~~~~~~l~~l~~~Gi~~~~g~-~~~g~iR 349 (377)
T 3e77_A 271 AAAMEKLSSIKSQTIYEIIDNSQGFYVCPVEPQNRSKMNIPFRIGNAKGDDALEKRFLDKALELNMLSLKGH-RSVGGIR 349 (377)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSTTSEECCSCGGGBCSSEEEEEESSTTCCHHHHHHHHHHHHHTTEESCBCC-TTTCSEE
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCceecCCCHHHcCCcEEEEEcCCCCCchhHHHHHHHHHHHCCcEEeCCC-CcCCEEE
Confidence 3778888999999999999987 6653221 2367 58888875 11 122211 11122221 1234599
Q ss_pred EEeeCCCCHHHHHHHHHHHHHHHHhc
Q psy5049 111 YESSHLRSANLWNRPHSPSLMAVFRG 136 (153)
Q Consensus 111 I~lsA~HT~edId~L~~~~L~~~~~~ 136 (153)
+++...+|+||||++++ +|+++.+.
T Consensus 350 iS~~~~~t~edId~l~~-al~~~~~~ 374 (377)
T 3e77_A 350 ASLYNAVTIEDVQKLAA-FMKKFLEM 374 (377)
T ss_dssp EECCTTSCHHHHHHHHH-HHHHHHHH
T ss_pred EECCCCCCHHHHHHHHH-HHHHHHHH
Confidence 99999999999999999 88877654
No 84
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=95.94 E-value=0.015 Score=47.24 Aligned_cols=87 Identities=14% Similarity=-0.064 Sum_probs=57.1
Q ss_pred cchHHHHHHHHHHHHHHHHHHhCCCcccCC-------CCCCeEEEEcCC-----chHHHhcc----cccc---C-----C
Q psy5049 45 SGIRRISVLAHNTRYFRRKLNRLGLIVYGH-------RDSPVVPVLVFF-----FSKVGQTS----IGLG---V-----E 100 (153)
Q Consensus 45 ~~~~rr~~L~~ni~~fr~~L~~~G~~~~~~-------s~SPIiPV~~g~-----~~~~~~~a----~~i~---~-----P 100 (153)
..++..++.+++..++++.|.+.|+.+... ....++++.+.+ .....+.. +.++ + |
T Consensus 266 ~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~L~~~GI~v~~~~~p~~~~~ 345 (391)
T 3dr4_A 266 RVDEHLAARERVVGWYEQKLARLGNRVTKPHVALTGRHVFWMYTVRLGEGLSTTRDQVIKDLDALGIESRPVFHPMHIMP 345 (391)
T ss_dssp THHHHHHHHHHHHHHHHHHHGGGTTSEECCCCCTTSCCCCSSEEEEECSSCSSCHHHHHHHHHHTTCCCEECCCCGGGSG
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCccccCcCCCCCCcceeEEEEEEECCccchhHHHHHHHHHHCCCceeecCCccccCh
Confidence 346778889999999999999888765332 112357887765 23333322 2111 1 1
Q ss_pred C------------CCCCCceEEEEeeCCCCHHHHHHHHHHHHHH
Q psy5049 101 Q------------TALNDGLSLYESSHLRSANLWNRPHSPSLMA 132 (153)
Q Consensus 101 t------------VP~g~~RlRI~lsA~HT~edId~L~~~~L~~ 132 (153)
. .......+|++++..+|+|||+++++ +++.
T Consensus 346 ~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~edi~~~~~-~l~~ 388 (391)
T 3dr4_A 346 PYAHLATDDLKIAEACGVDGLNLPTHAGLTEADIDRVIA-ALDQ 388 (391)
T ss_dssp GGGGGCCTTCHHHHHHHHHEEEECCCTTCCHHHHHHHHH-HHHT
T ss_pred hhhhcCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHH-HHHH
Confidence 0 01135689999999999999999988 6654
No 85
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=95.93 E-value=0.03 Score=44.81 Aligned_cols=88 Identities=10% Similarity=-0.009 Sum_probs=58.7
Q ss_pred hHHHHHHHHHHHHHHHHH-HhCCCcccCC-----CCCCeEEEEcCCchHHHhcc---ccccCCCC--CCCCceEEEE-ee
Q psy5049 47 IRRISVLAHNTRYFRRKL-NRLGLIVYGH-----RDSPVVPVLVFFFSKVGQTS---IGLGVEQT--ALNDGLSLYE-SS 114 (153)
Q Consensus 47 ~~rr~~L~~ni~~fr~~L-~~~G~~~~~~-----s~SPIiPV~~g~~~~~~~~a---~~i~~PtV--P~g~~RlRI~-ls 114 (153)
++.+++++++..++.+.| .+.|+.+... ..++++.+.+.+.....+.. .....|.. +.+...+||+ +.
T Consensus 280 ~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~iRis~~~ 359 (385)
T 2bkw_A 280 HKRWDLHREMSDWFKDSLVNGLQLTSVSRYPSNMSAHGLTAVYVADPPDVIAFLKSHGVVIAGGIHKDIGPKYIRIGHMG 359 (385)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCCEESSCSSSTTBCSSCEEEECSCHHHHHHHHHHTTEECBCCCCTTTGGGEEEECCCG
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCceecccCcccccCCceEEEecCCHHHHHHHHHHCCeEEeCCCCcccCCCEEEEEccc
Confidence 567889999999999999 8878765421 13678888876533333322 11122221 2346789999 55
Q ss_pred C---CCCHHHHHHHHHHHHHHHHh
Q psy5049 115 H---LRSANLWNRPHSPSLMAVFR 135 (153)
Q Consensus 115 A---~HT~edId~L~~~~L~~~~~ 135 (153)
. .+|+||++++++ +|+.+.+
T Consensus 360 ~~~~~~~~e~i~~~~~-~l~~~~~ 382 (385)
T 2bkw_A 360 VTACNKNLPYMKNCFD-LIKLALQ 382 (385)
T ss_dssp GGTSSTTCTHHHHHHH-HHHHHTT
T ss_pred cccccCCHHHHHHHHH-HHHHHHH
Confidence 3 579999999998 7776654
No 86
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=95.86 E-value=0.017 Score=49.42 Aligned_cols=85 Identities=9% Similarity=-0.098 Sum_probs=58.1
Q ss_pred hHHHHHHHHHHHHHHHHHHhC--CCc--cc-CCCCCCeEEEEcCCchHHHhcc-----ccc-cCCCCCCCCceEEEEeeC
Q psy5049 47 IRRISVLAHNTRYFRRKLNRL--GLI--VY-GHRDSPVVPVLVFFFSKVGQTS-----IGL-GVEQTALNDGLSLYESSH 115 (153)
Q Consensus 47 ~~rr~~L~~ni~~fr~~L~~~--G~~--~~-~~s~SPIiPV~~g~~~~~~~~a-----~~i-~~PtVP~g~~RlRI~lsA 115 (153)
++.+++++++..+|++.|.++ ++. +. ..+...++.+-+.+......++ ..+ ..| .|...+||+++.
T Consensus 374 ~~~~~~~~~~~~~l~~~L~~l~~~~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~---~g~~~iRi~~~~ 450 (472)
T 1ohv_A 374 EDLLSNAAHAGKVLLTGLLDLQARYPQFISRVRGRGTFCSFDTPDESIRNKLISIARNKGVMLGG---CGDKSIRFRPTL 450 (472)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHCTTTCEEEEEETTEEEEECSSHHHHHHHHHHHHHTTEECEE---ETTTEEEECCCT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhhCCCcEEeecCCceEEEEEeCChhHHHHHHHHHHHCCeEEec---CCCCEEEEECCC
Confidence 567899999999999999875 232 10 1234678777666533333332 122 223 356899999999
Q ss_pred CCCHHHHHHHHHHHHHHHHh
Q psy5049 116 LRSANLWNRPHSPSLMAVFR 135 (153)
Q Consensus 116 ~HT~edId~L~~~~L~~~~~ 135 (153)
.||++||+++++ +|+.+.+
T Consensus 451 ~~t~e~i~~~~~-~l~~~l~ 469 (472)
T 1ohv_A 451 VFRDHHAHLFLN-IFSDILA 469 (472)
T ss_dssp TCCHHHHHHHHH-HHHHHHH
T ss_pred CCCHHHHHHHHH-HHHHHHH
Confidence 999999999998 7776544
No 87
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=95.85 E-value=0.024 Score=46.39 Aligned_cols=87 Identities=8% Similarity=-0.127 Sum_probs=56.4
Q ss_pred chHHHHHHHHHHHHHHHHHHhCCCcccCCCCCCeEEEEcCC----------------chHHHh-cc----c----cccC-
Q psy5049 46 GIRRISVLAHNTRYFRRKLNRLGLIVYGHRDSPVVPVLVFF----------------FSKVGQ-TS----I----GLGV- 99 (153)
Q Consensus 46 ~~~rr~~L~~ni~~fr~~L~~~G~~~~~~s~SPIiPV~~g~----------------~~~~~~-~a----~----~i~~- 99 (153)
..+.+++++++..++.+.|++.|+.+.....+..+.+-+.. ...... +. + +..|
T Consensus 306 ~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~ 385 (422)
T 3fvs_A 306 FVQFPQAMQRCRDHMIRSLQSVGLKPIIPQGSYFLITDISDFKRKMPDLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFY 385 (422)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTCEEEBCSBSSEEEEECHHHHHHCCCCCCCTTCCHHHHHHHHHHHHHCEECEEGGGGS
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCeecCCCeeeEEEEechhhcccccccccccccccHHHHHHHHHHhcCEEEeCcHHhc
Confidence 36788899999999999999999875433445554444322 111111 11 1 1111
Q ss_pred --CCCCCCCceEEEEeeCCCCHHHHHHHHHHHHHHHHh
Q psy5049 100 --EQTALNDGLSLYESSHLRSANLWNRPHSPSLMAVFR 135 (153)
Q Consensus 100 --PtVP~g~~RlRI~lsA~HT~edId~L~~~~L~~~~~ 135 (153)
|..+.+...+||+++. |+++|+++++ .|+.+.+
T Consensus 386 ~~~~~~~~~~~iRis~~~--~~e~i~~~l~-~l~~~l~ 420 (422)
T 3fvs_A 386 SVPHQKHFDHYIRFCFVK--DEATLQAMDE-KLRKWKV 420 (422)
T ss_dssp CHHHHTTSCSEEEEECCC--CHHHHHHHHH-HHHHHHH
T ss_pred CCcCCCCCCCeEEEEecC--CHHHHHHHHH-HHHHHHh
Confidence 2235678999999886 9999999988 7766543
No 88
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=95.83 E-value=0.032 Score=45.98 Aligned_cols=90 Identities=9% Similarity=0.038 Sum_probs=58.3
Q ss_pred chHHHHHHHHHHHHHHHHHHhC-CCcccCCCC-----C-CeEEEEcCC-------chHHHhcc-----cc---cc---CC
Q psy5049 46 GIRRISVLAHNTRYFRRKLNRL-GLIVYGHRD-----S-PVVPVLVFF-------FSKVGQTS-----IG---LG---VE 100 (153)
Q Consensus 46 ~~~rr~~L~~ni~~fr~~L~~~-G~~~~~~s~-----S-PIiPV~~g~-------~~~~~~~a-----~~---i~---~P 100 (153)
.++..++.+++..++++.|.+. |+.+.+.++ . +++++.+.+ .....+.. +. ++ .|
T Consensus 265 ~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~~~~v~~~~~p 344 (418)
T 2c81_A 265 LDDKNAIREKNAMFLNDALSKIDGIKVMKRPPQVSRQTYYGYVFRFDPVKFGGLNADQFCEILREKLNMGTFYLHPPYLP 344 (418)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSTTEEECCCCTTEEECCCSEEEEEECGGGTTTCCHHHHHHHHHHHHTCCTTTEECCCCC
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCcccCCCCCCCcccccEEEEEEEccccccccCHHHHHHHHHHcCCCCcccccccccc
Confidence 4667888889999999999886 665532222 2 478787752 22222211 12 21 12
Q ss_pred C-----------------------------CCC----CCceEEEEeeCCC-CHHHHHHHHHHHHHHHHhc
Q psy5049 101 Q-----------------------------TAL----NDGLSLYESSHLR-SANLWNRPHSPSLMAVFRG 136 (153)
Q Consensus 101 t-----------------------------VP~----g~~RlRI~lsA~H-T~edId~L~~~~L~~~~~~ 136 (153)
. +|. ....+|++++..+ |+|||+++++ +++.+.+.
T Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~gt~edi~~~~~-~l~~~~~~ 413 (418)
T 2c81_A 345 VHKNPLFCPWTKNRYLKSVRKTEAYWRGLHYPVSERASGQSIVIHHAILLAEPSHLSLLVD-AVAELARK 413 (418)
T ss_dssp GGGCTTCCGGGCTTSCHHHHCCHHHHHTCCCHHHHHHHHHEEEEEGGGGGSCHHHHHHHHH-HHHHHHHT
T ss_pred cccCchhcccccccccccccccccccccCCChHHHHHHhCEEEecCCccCCCHHHHHHHHH-HHHHHHHh
Confidence 1 010 0258999999999 9999999999 88877654
No 89
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=95.83 E-value=0.027 Score=45.64 Aligned_cols=81 Identities=9% Similarity=-0.099 Sum_probs=54.6
Q ss_pred hHHHHHHHHHHHHHHHHHHhCCCcccCCCCCCeEEEEcCC-----chHHHh-cc--------ccccCCCCCCCCceEEEE
Q psy5049 47 IRRISVLAHNTRYFRRKLNRLGLIVYGHRDSPVVPVLVFF-----FSKVGQ-TS--------IGLGVEQTALNDGLSLYE 112 (153)
Q Consensus 47 ~~rr~~L~~ni~~fr~~L~~~G~~~~~~s~SPIiPV~~g~-----~~~~~~-~a--------~~i~~PtVP~g~~RlRI~ 112 (153)
++.+++++++..++.+.|.+.|+.+.....+.++.+-+.+ .....+ +. ....|+..+.+...+||+
T Consensus 289 ~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~iRis 368 (386)
T 1u08_A 289 LALPDFYRQKRDILVNALNESRLEILPCEGTYFLLVDYSAVSTLDDVEFCQWLTQEHGVAAIPLSVFCADPFPHKLIRLC 368 (386)
T ss_dssp HTHHHHHHHHHHHHHHHTTSSSCEECCCCBSSEEEEECTTTCCSCHHHHHHHHHHHSCEECEEGGGGCSSCCCSCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCeecCCCceEEEEEecCCCCCCCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCEEEEE
Confidence 5678889999999999999888876433335677776653 222222 11 122344444567889999
Q ss_pred eeCCCCHHHHHHHHHHHH
Q psy5049 113 SSHLRSANLWNRPHSPSL 130 (153)
Q Consensus 113 lsA~HT~edId~L~~~~L 130 (153)
++ ++++||+++++ .|
T Consensus 369 ~~--~~~~~i~~~~~-~l 383 (386)
T 1u08_A 369 FA--KKESTLLAAAE-RL 383 (386)
T ss_dssp CC--SCHHHHHHHHH-HH
T ss_pred Ec--CCHHHHHHHHH-HH
Confidence 97 48999999877 54
No 90
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=95.77 E-value=0.015 Score=47.38 Aligned_cols=84 Identities=17% Similarity=0.054 Sum_probs=53.0
Q ss_pred chHHHHHHHHHHHHHHHHHHhC-CCcccCC-CCCC--eEEEEcCC-----chHHHhcc----ccc--cCC-C---C-CCC
Q psy5049 46 GIRRISVLAHNTRYFRRKLNRL-GLIVYGH-RDSP--VVPVLVFF-----FSKVGQTS----IGL--GVE-Q---T-ALN 105 (153)
Q Consensus 46 ~~~rr~~L~~ni~~fr~~L~~~-G~~~~~~-s~SP--IiPV~~g~-----~~~~~~~a----~~i--~~P-t---V-P~g 105 (153)
-++.+++.+++..++.+.|.+. |+.+.+. ..++ .++|.+.+ .+...+.. +.+ .|| . . |..
T Consensus 268 l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~ 347 (390)
T 3b8x_A 268 LPRFISVRRKNAEYFLDKFKDHPYLDVQQETGESSWFGFSFIIKKDSGVIRKQLVENLNSAGIECRPIVTGNFLKNTDVL 347 (390)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCSSEEECCCCSBCCCCEEEEEECTTSCCCHHHHHHHHHHTTBCCBCSTTSSGGGCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCcccEEEEEEecCcCcccHHHHHHHHHHCCCCeeeecCCchhhcchhh
Confidence 3567888899999999999886 6654322 1233 36776652 22333322 222 222 2 2 321
Q ss_pred C------------------ceEEEEeeCCCCHHHHHHHHHHHH
Q psy5049 106 D------------------GLSLYESSHLRSANLWNRPHSPSL 130 (153)
Q Consensus 106 ~------------------~RlRI~lsA~HT~edId~L~~~~L 130 (153)
+ ..+|++++..+|+|||+++++ +|
T Consensus 348 ~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~t~~di~~i~~-~l 389 (390)
T 3b8x_A 348 KYFDYTVHNNVDNAEYLDKNGLFVGNHQIELFDEIDYLRE-VL 389 (390)
T ss_dssp TTCEEEESSCCHHHHHHHHHEEEEECCSSCCHHHHHHHHH-HT
T ss_pred hcCCCCCcCCChHHHHHhcCEEEeeCCCCCCHHHHHHHHH-hh
Confidence 1 369999999999999999887 54
No 91
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=95.71 E-value=0.04 Score=43.98 Aligned_cols=90 Identities=8% Similarity=-0.040 Sum_probs=56.8
Q ss_pred cchHHHHHHHHHHHHHHHHHHhC-CCcccCC----CCC-CeEEEEcCC-----chHHHhcc----cccc--C-CC-----
Q psy5049 45 SGIRRISVLAHNTRYFRRKLNRL-GLIVYGH----RDS-PVVPVLVFF-----FSKVGQTS----IGLG--V-EQ----- 101 (153)
Q Consensus 45 ~~~~rr~~L~~ni~~fr~~L~~~-G~~~~~~----s~S-PIiPV~~g~-----~~~~~~~a----~~i~--~-Pt----- 101 (153)
..++.+++.+++..++.+.|.+. |+.+... ..+ .++++.+.. .....+.. +.++ + |.
T Consensus 245 ~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gi~v~~~~~p~~~~~~ 324 (375)
T 2fnu_A 245 KAPFLMQKREEAALTYDRIFKDNPYFTPLHPLLKDKSSNHLYPILMHQKFFTCKKLILESLHKRGILAQVHYKPIYQYQL 324 (375)
T ss_dssp THHHHHHHHHHHHHHHHHHHTTCSSEEESGGGCSSCCCCSCEEEEECGGGGGGHHHHHHHHHHTTEECBCCCCCGGGSHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCCCcceEEEEEEeCccccchHHHHHHHHHHCCCCccccccccccchh
Confidence 34678889999999999999986 6654322 112 345665543 12222221 2222 2 22
Q ss_pred ---------CC----CCCceEEEEeeCCCCHHHHHHHHHHHHHHHHh
Q psy5049 102 ---------TA----LNDGLSLYESSHLRSANLWNRPHSPSLMAVFR 135 (153)
Q Consensus 102 ---------VP----~g~~RlRI~lsA~HT~edId~L~~~~L~~~~~ 135 (153)
+| .+...+||+++..+|++|++++++ +|+.+.+
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~lRi~~~~~~t~~~i~~~~~-~l~~~~~ 370 (375)
T 2fnu_A 325 YQQLFNTAPLKSAEDFYHAEISLPCHANLNLESVQNIAH-SVLKTFE 370 (375)
T ss_dssp HHHHHCCCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHH-HHHHHHH
T ss_pred hhcCCCccCChHHHHHHhCEEEecCCCCCCHHHHHHHHH-HHHHHHH
Confidence 11 012579999999999999999999 8876654
No 92
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=95.69 E-value=0.042 Score=46.45 Aligned_cols=87 Identities=10% Similarity=0.042 Sum_probs=57.2
Q ss_pred chHHHHHHHHHHHHHHHHHHhC--CCcccCCCCCCeEEEEcCC--chHHHhcc--ccccCCCCCCCCceEEEEeeCCCCH
Q psy5049 46 GIRRISVLAHNTRYFRRKLNRL--GLIVYGHRDSPVVPVLVFF--FSKVGQTS--IGLGVEQTALNDGLSLYESSHLRSA 119 (153)
Q Consensus 46 ~~~rr~~L~~ni~~fr~~L~~~--G~~~~~~s~SPIiPV~~g~--~~~~~~~a--~~i~~PtVP~g~~RlRI~lsA~HT~ 119 (153)
..+++++..++..++++.|.+. |+.+.+.+..+++.+...+ .....+.. ..|..+... ....+|++++ .+|+
T Consensus 343 ~~~~~~~~~~~~~~l~~~L~~~~~g~~~~~~~~~~~v~~~~~~~~~~~l~~~L~~~Gi~v~~~~-~~~~~ri~~~-~~t~ 420 (497)
T 3mc6_A 343 YIESCQEIVGAAMKFKKYIQENIPDLDIMGNPRYSVISFSSKTLNIHELSDRLSKKGWHFNALQ-KPVALHMAFT-RLSA 420 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCTTCEECSCCCSSEEEEECTTTTHHHHHHHHHTTTCBCEECC-SSCCEEEECC-TTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCCeeEEEEeCCCCCHHHHHHHHHhCCEEEecCC-CCCeEEEEEe-CCCH
Confidence 3677889999999999999995 8877555556676665442 22222222 222111111 1236899999 8899
Q ss_pred HHHHHHHHHHHHHHHh
Q psy5049 120 NLWNRPHSPSLMAVFR 135 (153)
Q Consensus 120 edId~L~~~~L~~~~~ 135 (153)
+|++++++ +|+.+.+
T Consensus 421 e~i~~~~~-~L~~~l~ 435 (497)
T 3mc6_A 421 HVVDEICD-ILRTTVQ 435 (497)
T ss_dssp CTHHHHHH-HHHHHHH
T ss_pred HHHHHHHH-HHHHHHH
Confidence 99999999 7765543
No 93
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=95.69 E-value=0.04 Score=46.84 Aligned_cols=89 Identities=11% Similarity=0.071 Sum_probs=54.7
Q ss_pred hHHHHHHHHHHHHHHHHHHhCCCcccCCC-CC--CeEEEEcC-CchHHHhcc--ccccCCCC--C-CCCceEEEEeeCCC
Q psy5049 47 IRRISVLAHNTRYFRRKLNRLGLIVYGHR-DS--PVVPVLVF-FFSKVGQTS--IGLGVEQT--A-LNDGLSLYESSHLR 117 (153)
Q Consensus 47 ~~rr~~L~~ni~~fr~~L~~~G~~~~~~s-~S--PIiPV~~g-~~~~~~~~a--~~i~~PtV--P-~g~~RlRI~lsA~H 117 (153)
.+.++++.++..++.+.|.+.|+.+...+ .. .++.+..+ +.....+.. ..+..|+. | .....+||+++..+
T Consensus 343 ~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~Gi~~~~~~~~~~~~~~lRis~~~~~ 422 (474)
T 1wyu_B 343 KKAAALAVLNARYLKELLKEKGYRVPYDGPSMHEFVAQPPEGFRALDLAKGLLELGFHPPTVYFPLIVKEALMVEPTETE 422 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCBCSSCSSCCSCEEEBCSTTCCHHHHHHHHHHTTCCCCEESCSTTSTTCEEECCCTTS
T ss_pred HHHHHHHHHHHHHHHHHHhhcCcEecCCCCcceEEEEEcCCCCCHHHHHHHHHHCCccccccccccccCCEEEEEeecCC
Confidence 44578889999999999998887652212 11 22221001 112222221 23322322 1 12578999999999
Q ss_pred CHHHHHHHHHHHHHHHHhc
Q psy5049 118 SANLWNRPHSPSLMAVFRG 136 (153)
Q Consensus 118 T~edId~L~~~~L~~~~~~ 136 (153)
|++|++++++ +|+.+.+.
T Consensus 423 t~e~id~~~~-~L~~~~~~ 440 (474)
T 1wyu_B 423 AKETLEAFAE-AMGALLKK 440 (474)
T ss_dssp CHHHHHHHHH-HHHHHHTS
T ss_pred CHHHHHHHHH-HHHHHHHh
Confidence 9999999999 88776655
No 94
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=95.68 E-value=0.055 Score=43.85 Aligned_cols=85 Identities=9% Similarity=0.112 Sum_probs=54.3
Q ss_pred hHHHHHHHHHHHHHHHHHHhCCCcccCCCCCCe-EEEEcC--CchHHHhcc----ccccCCCCCCCCceEEEEeeCCCCH
Q psy5049 47 IRRISVLAHNTRYFRRKLNRLGLIVYGHRDSPV-VPVLVF--FFSKVGQTS----IGLGVEQTALNDGLSLYESSHLRSA 119 (153)
Q Consensus 47 ~~rr~~L~~ni~~fr~~L~~~G~~~~~~s~SPI-iPV~~g--~~~~~~~~a----~~i~~PtVP~g~~RlRI~lsA~HT~ 119 (153)
.+.+++++++..++.+.|.+.|+.+.. +.+.. +.+-+. +.....+.. +.+++-........+||+++ +|+
T Consensus 303 ~~~~~~~~~~~~~l~~~L~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~iRis~~--~~~ 379 (398)
T 3ele_A 303 TGDINAYKENRDLLYEGLTRIGYHCFK-PDGAFYMFVKALEDDSNAFCEKAKEEDVLIVAADGFGCPGWVRISYC--VDR 379 (398)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTCCEEC-CSBSSEEEEECSSSCHHHHHHHHHTTTEECEESGGGTCTTEEEEECC--SCH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCeecC-CCeeEEEEEEcCCCCHHHHHHHHHHCCEEEeCccccCCCCeEEEEec--CCH
Confidence 346889999999999999998887643 44444 444443 222332222 22222222222579999995 799
Q ss_pred HHHHHHHHHHHHHHHh
Q psy5049 120 NLWNRPHSPSLMAVFR 135 (153)
Q Consensus 120 edId~L~~~~L~~~~~ 135 (153)
|+|+++++ .|..+.+
T Consensus 380 e~i~~~l~-~l~~~l~ 394 (398)
T 3ele_A 380 EMIKHSMP-AFEKIYK 394 (398)
T ss_dssp HHHHHHHH-HHHHHHH
T ss_pred HHHHHHHH-HHHHHHH
Confidence 99999998 7766543
No 95
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=95.62 E-value=0.017 Score=47.08 Aligned_cols=84 Identities=11% Similarity=0.003 Sum_probs=57.5
Q ss_pred hHHHHHHHHHHHHHHHHHHhC--CCccc--CCCCCCeEEEEcCCc---hHHHhcc---ccccCCCCCCCCceEEEEeeCC
Q psy5049 47 IRRISVLAHNTRYFRRKLNRL--GLIVY--GHRDSPVVPVLVFFF---SKVGQTS---IGLGVEQTALNDGLSLYESSHL 116 (153)
Q Consensus 47 ~~rr~~L~~ni~~fr~~L~~~--G~~~~--~~s~SPIiPV~~g~~---~~~~~~a---~~i~~PtVP~g~~RlRI~lsA~ 116 (153)
++.+++++++..++++.|++. ++... ..+.+.++.+.+.++ ....+.. .....|. +...+|++++..
T Consensus 301 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~l~~~gi~v~~~---~~~~iRis~~~~ 377 (397)
T 2ord_A 301 EGFLEEVEEKGNYLMKKLQEMKEEYDVVADVRGMGLMIGIQFREEVSNREVATKCFENKLLVVPA---GNNTIRFLPPLT 377 (397)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETTEEEEEECTTSCHHHHHHHHHHTTEECEEE---TTTEEEECCCTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhCCceEEEEEEeEEEEEEECChHHHHHHHHHHHHCCCEEccC---CCCEEEEECCcC
Confidence 578999999999999999876 34321 123467888877643 2222222 2222332 467899999999
Q ss_pred CCHHHHHHHHHHHHHHHH
Q psy5049 117 RSANLWNRPHSPSLMAVF 134 (153)
Q Consensus 117 HT~edId~L~~~~L~~~~ 134 (153)
+|+||++++++ +|+.+.
T Consensus 378 ~~~e~i~~~~~-~l~~~l 394 (397)
T 2ord_A 378 VEYGEIDLAVE-TLKKVL 394 (397)
T ss_dssp CCHHHHHHHHH-HHHHHH
T ss_pred CCHHHHHHHHH-HHHHHH
Confidence 99999999998 776554
No 96
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=95.56 E-value=0.052 Score=43.79 Aligned_cols=86 Identities=14% Similarity=0.072 Sum_probs=55.0
Q ss_pred hHHHHHHHHHHHHHHHHHHhCCCcccCCCC---CCeEEEEcCC---chHHHhcc-----ccccCCCCCCCCceEEEEeeC
Q psy5049 47 IRRISVLAHNTRYFRRKLNRLGLIVYGHRD---SPVVPVLVFF---FSKVGQTS-----IGLGVEQTALNDGLSLYESSH 115 (153)
Q Consensus 47 ~~rr~~L~~ni~~fr~~L~~~G~~~~~~s~---SPIiPV~~g~---~~~~~~~a-----~~i~~PtVP~g~~RlRI~lsA 115 (153)
++.+++++++..++.+.|.+.|+.+..... ..++.+.+.+ .....+.. +.+++-..+.+...+||++.+
T Consensus 294 ~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~ 373 (393)
T 1vjo_A 294 ANCWQRHQKNVEYLWERLEDIGLSLHVEKEYRLPTLTTVCIPDGVDGKAVARRLLNEHNIEVGGGLGELAGKVWRVGLMG 373 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCBSSCGGGBCSSEEEEECCTTCCHHHHHHHHHHHHCEECEECCGGGTTTEEEEECCG
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCcccCCccccCCcEEEEEcCCCCCHHHHHHHHHhhCCEEEecCccccCCCEEEEeCCc
Confidence 578899999999999999988887643221 3577777642 22222211 222211112346789999655
Q ss_pred -CCCHHHHHHHHHHHHHHH
Q psy5049 116 -LRSANLWNRPHSPSLMAV 133 (153)
Q Consensus 116 -~HT~edId~L~~~~L~~~ 133 (153)
..++++++++++ +|+.+
T Consensus 374 ~~~~~~~i~~~~~-~l~~~ 391 (393)
T 1vjo_A 374 FNSRKESVDQLIP-ALEQV 391 (393)
T ss_dssp GGCSHHHHHHHHH-HHHHH
T ss_pred cCChHHHHHHHHH-HHHHH
Confidence 456778999988 77654
No 97
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=95.54 E-value=0.026 Score=46.85 Aligned_cols=89 Identities=10% Similarity=-0.035 Sum_probs=58.1
Q ss_pred chHHHHHHHHHHHHHHHHHHhCC----CcccCCCCCCeEEEEc--------CCchHHHhcc------ccccCCCCCCCCc
Q psy5049 46 GIRRISVLAHNTRYFRRKLNRLG----LIVYGHRDSPVVPVLV--------FFFSKVGQTS------IGLGVEQTALNDG 107 (153)
Q Consensus 46 ~~~rr~~L~~ni~~fr~~L~~~G----~~~~~~s~SPIiPV~~--------g~~~~~~~~a------~~i~~PtVP~g~~ 107 (153)
.++.+++++++..++++.|.+.+ ......+...++.+.+ ++...+..+. .....|. ..+..
T Consensus 318 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~-~~~~~ 396 (439)
T 3dxv_A 318 RDDLPAMAERKGRLLRDGLSELAKRHPLIGDIRGRGLACGMELVCDRQSREPARAETAKLIYRAYQLGLVVYYV-GMNGN 396 (439)
T ss_dssp HTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETTEEEEEEEEETTTTEECHHHHHHHHHHHHHHTEECEEE-STTSC
T ss_pred hcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEEEEEEEEEecCccccCCCHHHHHHHHHHHHHCCcEEeec-CCCCC
Confidence 36788999999999999998652 1111123456777766 2333233322 2222333 22358
Q ss_pred eEEEEeeCCCCHHHHHHHHHHHHHHHHhc
Q psy5049 108 LSLYESSHLRSANLWNRPHSPSLMAVFRG 136 (153)
Q Consensus 108 RlRI~lsA~HT~edId~L~~~~L~~~~~~ 136 (153)
.+||+++..+|++|++++++ .|+.+.+.
T Consensus 397 ~iRi~~~~~~t~e~i~~~l~-~l~~~l~~ 424 (439)
T 3dxv_A 397 VLEFTPPLTITETDIHKALD-LLDRAFSE 424 (439)
T ss_dssp EEEECCCTTCCHHHHHHHHH-HHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHH-HHHHHHHH
Confidence 99999999999999999999 77766543
No 98
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=95.54 E-value=0.11 Score=41.35 Aligned_cols=82 Identities=13% Similarity=0.106 Sum_probs=56.9
Q ss_pred hHHHHHHHHHHHHHHHHHHhC-CCc-ccCCCCCCeEEEEcCC--chHHHhcc----ccc----cCCCCCCCCceEEEEee
Q psy5049 47 IRRISVLAHNTRYFRRKLNRL-GLI-VYGHRDSPVVPVLVFF--FSKVGQTS----IGL----GVEQTALNDGLSLYESS 114 (153)
Q Consensus 47 ~~rr~~L~~ni~~fr~~L~~~-G~~-~~~~s~SPIiPV~~g~--~~~~~~~a----~~i----~~PtVP~g~~RlRI~ls 114 (153)
.+++++++++..++++.|++. |+. +. .+.++++.+-+.+ .....+.. ..+ .|+ +.+...+||+++
T Consensus 266 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~~~--~~~~~~iRis~~ 342 (361)
T 3ftb_A 266 EESLLWIKKERKRFIEELNKIGFIKRVF-SPHANFVLCRLENISGEKLYDSLLKEDIVIRRCCNFI--GLDDSFVRFAIK 342 (361)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSSSEEEEE-CCSSSEEEEEESSSCHHHHHHHHHTTTEECEECTTST--TCCTTEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCceec-CCCCeEEEEEcCCCCHHHHHHHHHHCCeEEeeCccCC--CCCCCEEEEEcC
Confidence 577888999999999999987 555 43 4567777777753 22332222 222 222 345789999986
Q ss_pred CCCCHHHHHHHHHHHHHHHHh
Q psy5049 115 HLRSANLWNRPHSPSLMAVFR 135 (153)
Q Consensus 115 A~HT~edId~L~~~~L~~~~~ 135 (153)
+++|++++++ +++.+.+
T Consensus 343 ---~~~~~~~l~~-~l~~~~~ 359 (361)
T 3ftb_A 343 ---DEKKNTKFLR-ALKGVEN 359 (361)
T ss_dssp ---CHHHHHHHHH-HHHHHHH
T ss_pred ---CHHHHHHHHH-HHHHHHh
Confidence 8999999998 8877664
No 99
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=95.53 E-value=0.024 Score=46.15 Aligned_cols=86 Identities=9% Similarity=0.020 Sum_probs=57.1
Q ss_pred chHHHHHHHHHHHHHHHHHHhC----CCcccCCCCCCeEEEEcCCchHHHhcc-----ccc-cCCCCCCCCceEEEEeeC
Q psy5049 46 GIRRISVLAHNTRYFRRKLNRL----GLIVYGHRDSPVVPVLVFFFSKVGQTS-----IGL-GVEQTALNDGLSLYESSH 115 (153)
Q Consensus 46 ~~~rr~~L~~ni~~fr~~L~~~----G~~~~~~s~SPIiPV~~g~~~~~~~~a-----~~i-~~PtVP~g~~RlRI~lsA 115 (153)
.++..++++++..++++.|.+. +......+...++.+.+.+...+..+. ..+ ..| -+...+||+++.
T Consensus 298 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~---~~~~~iRi~~~~ 374 (395)
T 3nx3_A 298 EEKILENVNKLTPYLEQSLDELINEFDFCKKRKGLGFMQGLSLDKSVKVAKVIQKCQENALLLIS---CGENDLRFLPPL 374 (395)
T ss_dssp HTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETTEEEEEECTTSCHHHHHHHHHHTTEECEE---ETTTEEEECCCT
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeEEEEEEEEeCCcchHHHHHHHHHHCCCEEec---CCCCEEEEECCC
Confidence 3577889999999999998764 211111234578888776532222222 222 222 247899999999
Q ss_pred CCCHHHHHHHHHHHHHHHHh
Q psy5049 116 LRSANLWNRPHSPSLMAVFR 135 (153)
Q Consensus 116 ~HT~edId~L~~~~L~~~~~ 135 (153)
.+|+||++++++ +|+.+.+
T Consensus 375 ~~t~e~i~~~l~-~l~~~l~ 393 (395)
T 3nx3_A 375 ILQKEHIDEMSE-KLRKALK 393 (395)
T ss_dssp TCCHHHHHHHHH-HHHHHHH
T ss_pred CCCHHHHHHHHH-HHHHHHH
Confidence 999999999998 7776543
No 100
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=95.52 E-value=0.043 Score=44.02 Aligned_cols=80 Identities=14% Similarity=0.064 Sum_probs=56.3
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCcccCCCCCCeEEEEcCCc-hHHHhcc--ccc-cCCCCCCCCceEEEEeeCCCCHHHHH
Q psy5049 48 RRISVLAHNTRYFRRKLNRLGLIVYGHRDSPVVPVLVFFF-SKVGQTS--IGL-GVEQTALNDGLSLYESSHLRSANLWN 123 (153)
Q Consensus 48 ~rr~~L~~ni~~fr~~L~~~G~~~~~~s~SPIiPV~~g~~-~~~~~~a--~~i-~~PtVP~g~~RlRI~lsA~HT~edId 123 (153)
+.+++++++..++++.|.+.+.... .+.+.++.+.+.++ ....+.. ..| ..|. +...+||+++..+|++|++
T Consensus 290 ~~~~~~~~~~~~l~~~L~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~l~~~gi~~~~~---~~~~iRi~~~~~~~~~~i~ 365 (375)
T 2eh6_A 290 KLLPHVREVGNYFKEKLKELGKGKV-KGRGLMLGLELERECKDYVLKALEKGLLINCT---AGKVLRFLPPLIIQKEHID 365 (375)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSSEE-EEETTEEEEECSSCCHHHHHHHHHTTEECEEE---TTTEEEECCCTTCCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCc-eEEEEEEEEEEcCcHHHHHHHHHHCCCEEecC---CCCEEEEECCCCCCHHHHH
Confidence 6788999999999999998775332 34567888877642 3333222 111 2222 4678999999999999999
Q ss_pred HHHHHHHHH
Q psy5049 124 RPHSPSLMA 132 (153)
Q Consensus 124 ~L~~~~L~~ 132 (153)
++++ +|+.
T Consensus 366 ~~~~-~l~~ 373 (375)
T 2eh6_A 366 RAIS-VLRE 373 (375)
T ss_dssp HHHH-HHHH
T ss_pred HHHH-HHHH
Confidence 9888 7654
No 101
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=95.51 E-value=0.14 Score=42.10 Aligned_cols=87 Identities=7% Similarity=-0.063 Sum_probs=55.4
Q ss_pred hHHHHHHHHHHHHHHHHHHhCCCcccCCCCCCeEEEEcCCc------h---HHHhcc--c-cc-cCCCC---CCCCceEE
Q psy5049 47 IRRISVLAHNTRYFRRKLNRLGLIVYGHRDSPVVPVLVFFF------S---KVGQTS--I-GL-GVEQT---ALNDGLSL 110 (153)
Q Consensus 47 ~~rr~~L~~ni~~fr~~L~~~G~~~~~~s~SPIiPV~~g~~------~---~~~~~a--~-~i-~~PtV---P~g~~RlR 110 (153)
.+.+++++++..++.+.|.+.|+.+.....+..+.+-+.+. . ...+.. . .| ..|.- +.+...+|
T Consensus 323 ~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~~~~~~~~~~~~iR 402 (428)
T 1iay_A 323 RESAMRLGKRHKHFTNGLEVVGIKCLKNNAGLFCWMDLRPLLRESTFDSEMSLWRVIINDVKLNVSPGSSFECQEPGWFR 402 (428)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCBCCCSSSSEEEEECGGGCSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSSSEEE
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCcccCCCeeEEEEEechhhcCCCchhHHHHHHHHHHHhCCEEEeCchhhCCCCCCEEE
Confidence 56788889999999999998888764322345555655431 1 111111 1 11 11111 12356899
Q ss_pred EEeeCCCCHHHHHHHHHHHHHHHHh
Q psy5049 111 YESSHLRSANLWNRPHSPSLMAVFR 135 (153)
Q Consensus 111 I~lsA~HT~edId~L~~~~L~~~~~ 135 (153)
|+++ .+|++|++++++ .|+.+.+
T Consensus 403 is~~-~~~~e~i~~~~~-~l~~~l~ 425 (428)
T 1iay_A 403 VCFA-NMDDGTVDIALA-RIRRFVG 425 (428)
T ss_dssp EECS-SSCHHHHHHHHH-HHHHHHH
T ss_pred EEEe-cCCHHHHHHHHH-HHHHHHh
Confidence 9998 689999999998 7776654
No 102
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=95.50 E-value=0.068 Score=43.76 Aligned_cols=89 Identities=9% Similarity=-0.125 Sum_probs=55.7
Q ss_pred hHHHHHHHHHHHHHHHHHHhC-CCcccCCC--CCCe---EEEEcCCchHHHhcc----ccc--cCCCCCC--------C-
Q psy5049 47 IRRISVLAHNTRYFRRKLNRL-GLIVYGHR--DSPV---VPVLVFFFSKVGQTS----IGL--GVEQTAL--------N- 105 (153)
Q Consensus 47 ~~rr~~L~~ni~~fr~~L~~~-G~~~~~~s--~SPI---iPV~~g~~~~~~~~a----~~i--~~PtVP~--------g- 105 (153)
++..++..++..++++.|.+. |+.+...+ ..++ +++...+.....+.. +.+ .+|.+.. |
T Consensus 274 ~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~ 353 (399)
T 2oga_A 274 DSWNGRRSALAAEYLSGLAGLPGIGLPVTAPDTDPVWHLFTVRTERRDELRSHLDARGIDTLTHYPVPVHLSPAYAGEAP 353 (399)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCTTCBCCCCCTTEECCCSSEEEECSSHHHHHHHHHHTTBCCBCSCSSCGGGSHHHHTTSC
T ss_pred HHHHHHHHHHHHHHHHHhccCCCccccCCCCCCcceeEEEEEECCCHHHHHHHHHHCCCceecCCCCccccchhhcccCC
Confidence 456777788899999999876 66542211 1233 555544444443332 222 2332110 1
Q ss_pred ------------CceEEEEeeCCCCHHHHHHHHHHHHHHHHhc
Q psy5049 106 ------------DGLSLYESSHLRSANLWNRPHSPSLMAVFRG 136 (153)
Q Consensus 106 ------------~~RlRI~lsA~HT~edId~L~~~~L~~~~~~ 136 (153)
...+||+++..+|+||++++++ +|+.+.+.
T Consensus 354 ~~~~~p~~~~~~~~~lRi~~~~~~t~edi~~~~~-~l~~~~~~ 395 (399)
T 2oga_A 354 PEGSLPRAESFARQVLSLPIGPHLERPQALRVID-AVREWAER 395 (399)
T ss_dssp CTTSCHHHHHHHHHEEEECCSTTCCHHHHHHHHH-HHHHHHHS
T ss_pred CCCCChhHHHHHhCEEEccCCCCCCHHHHHHHHH-HHHHHHHH
Confidence 2579999999999999999999 88776543
No 103
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=95.46 E-value=0.063 Score=44.71 Aligned_cols=87 Identities=10% Similarity=-0.017 Sum_probs=52.1
Q ss_pred hHHHHHHHHHHHHHHHHHHhC-CCcccCCC------CCCeEEEEcC-----CchHHHhcc----cc---ccCCCC---CC
Q psy5049 47 IRRISVLAHNTRYFRRKLNRL-GLIVYGHR------DSPVVPVLVF-----FFSKVGQTS----IG---LGVEQT---AL 104 (153)
Q Consensus 47 ~~rr~~L~~ni~~fr~~L~~~-G~~~~~~s------~SPIiPV~~g-----~~~~~~~~a----~~---i~~PtV---P~ 104 (153)
++..++.+++..++++.|.+. |+.+.... ...++++.+. +.+...+.. +. ..+|.+ |.
T Consensus 307 ~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~GI~v~~~~~~~~~~~p~ 386 (437)
T 3bb8_A 307 EEFVEKRKANFKYLKDALQSCADFIELPEATENSDPSWFGFPITLKEDSGVSRIDLVKFLDEAKVGTRLLFAGNLTRQPY 386 (437)
T ss_dssp HHHHHHHHHHHHHHHHHGGGGTTTEECCCCCTTEECCCSSEEEEECGGGSSCHHHHHHHHHHTTBCCBCCTTSSGGGSGG
T ss_pred HHHHHHHHHHHHHHHHHhhccCCccccCCCCCCCceeeEEEEEEECCcCcCcHHHHHHHHHHCCCceeccCCcccccCch
Confidence 456666688999999999987 65432211 1124556454 223333222 11 122222 21
Q ss_pred C------------------CceEEEEeeCCCCHHHHHHHHHHHHHHHH
Q psy5049 105 N------------------DGLSLYESSHLRSANLWNRPHSPSLMAVF 134 (153)
Q Consensus 105 g------------------~~RlRI~lsA~HT~edId~L~~~~L~~~~ 134 (153)
- ...+|++++..+|++||+++++ +++.+.
T Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~~di~~i~~-~l~~~~ 433 (437)
T 3bb8_A 387 FHDVKYRVVGELTNTDRIMNQTFWIGIYPGLTHDHLDYVVS-KFEEFF 433 (437)
T ss_dssp GSSCCCEECSCCHHHHHHHHHEEEECCSTTCCHHHHHHHHH-HHHHHT
T ss_pred hhccCccccCCCcHHHHHhcCEEEecCCCCCCHHHHHHHHH-HHHHHH
Confidence 0 1249999999999999999998 776654
No 104
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=95.44 E-value=0.062 Score=46.23 Aligned_cols=85 Identities=6% Similarity=-0.075 Sum_probs=56.4
Q ss_pred hHHHHHHHHHHHHHHHHHHhC-CCcccCCCCCCeEEEE-cCCch--------------H--HHhcc-------ccccCCC
Q psy5049 47 IRRISVLAHNTRYFRRKLNRL-GLIVYGHRDSPVVPVL-VFFFS--------------K--VGQTS-------IGLGVEQ 101 (153)
Q Consensus 47 ~~rr~~L~~ni~~fr~~L~~~-G~~~~~~s~SPIiPV~-~g~~~--------------~--~~~~a-------~~i~~Pt 101 (153)
.+++++++++..++.+.|++. |+.+. .+++.++.++ +..+. . +..+. .+...+.
T Consensus 382 ~~~~~~l~~~~~~l~~~L~~~~g~~~~-~p~gg~~~~~~l~~p~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pG~~f~ 460 (498)
T 3ihj_A 382 ESVLGNLAKKAKLTEDLFNQVPGIHCN-PLQGAMYAFPRIFIPAKAVEAAQAHQMAPDMFYCMKLLEETGICVVPGSGFG 460 (498)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSTTEECC-CCCBSSEECCEECCCHHHHHHHHHTTSCHHHHHHHHHHHHHCBCCEEGGGTC
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCcEec-CCCeEEEEEEeccCchhhhHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccC
Confidence 456788999999999999987 77653 3555655442 22111 1 12222 2223455
Q ss_pred CCCCCceEEEEeeCCCCHHHHHHHHHHHHHHHHh
Q psy5049 102 TALNDGLSLYESSHLRSANLWNRPHSPSLMAVFR 135 (153)
Q Consensus 102 VP~g~~RlRI~lsA~HT~edId~L~~~~L~~~~~ 135 (153)
++.|+..+|+++. +++++++.+++ .|..+.+
T Consensus 461 ~~~~~~~~Ris~~--~~~e~l~~~i~-~L~~~~~ 491 (498)
T 3ihj_A 461 QREGTYHFRMTIL--PPVEKLKTVLQ-KVKDFHI 491 (498)
T ss_dssp CCTTCCBEEEECC--SCHHHHHHHHH-HHHHHHH
T ss_pred CCCCCCEEEEEeC--CCHHHHHHHHH-HHHHHHH
Confidence 5678889999993 89999999888 7765543
No 105
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=95.36 E-value=0.062 Score=46.12 Aligned_cols=89 Identities=11% Similarity=0.006 Sum_probs=57.2
Q ss_pred chHHHHHHHHHHHHHHHHHHhC-CCcccCCCCCCeEEEEc-CC-------chH-----------HHhcc--cc---ccCC
Q psy5049 46 GIRRISVLAHNTRYFRRKLNRL-GLIVYGHRDSPVVPVLV-FF-------FSK-----------VGQTS--IG---LGVE 100 (153)
Q Consensus 46 ~~~rr~~L~~ni~~fr~~L~~~-G~~~~~~s~SPIiPV~~-g~-------~~~-----------~~~~a--~~---i~~P 100 (153)
..+..++..++..+|.+.|.+. |+.+.+.+...++.+.. .. ... ..... .. +.++
T Consensus 399 ~~~~~~~~~~~a~~l~~~L~~~~g~~~~~~~~~~~v~f~~~p~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~G~~~~~~~ 478 (515)
T 2jis_A 399 LERRIDQAFVLARYLVEEMKKREGFELVMEPEFVNVCFWFVPPSLRGKQESPDYHERLSKVAPVLKERMVKEGSMMIGYQ 478 (515)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSTTEEESSCCSSSEEEEEECCGGGTTCTTSTTHHHHHHTHHHHHHHHHHHHTSCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCeeEEEEEEeCccccccccchhHHHHHHHHHHHHHHHHHhcCCEEEEEE
Confidence 3567888999999999999986 77765444445555533 11 111 11111 22 2222
Q ss_pred CCCCCCceEEEEe-eCCCCHHHHHHHHHHHHHHHHh
Q psy5049 101 QTALNDGLSLYES-SHLRSANLWNRPHSPSLMAVFR 135 (153)
Q Consensus 101 tVP~g~~RlRI~l-sA~HT~edId~L~~~~L~~~~~ 135 (153)
.++.+...+|+++ +..+|++||+++++ +++.+.+
T Consensus 479 ~~~~~~~~lRis~~~~~~t~edid~~~~-~l~~~~~ 513 (515)
T 2jis_A 479 PHGTRGNFFRVVVANSALTCADMDFLLN-ELERLGQ 513 (515)
T ss_dssp EETTEEEEEEEECCCTTCCHHHHHHHHH-HHHHHHT
T ss_pred EECCceEEEEEEeCCCCCCHHHHHHHHH-HHHHHHh
Confidence 2333346899999 89999999999998 7776543
No 106
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=95.33 E-value=0.078 Score=42.82 Aligned_cols=90 Identities=7% Similarity=-0.123 Sum_probs=57.9
Q ss_pred chHHHHHHHHHHHHHHHHHHhCCCcccCC-----CCCCeEEEEcCCchHHHhcc------ccccCC-CCC----------
Q psy5049 46 GIRRISVLAHNTRYFRRKLNRLGLIVYGH-----RDSPVVPVLVFFFSKVGQTS------IGLGVE-QTA---------- 103 (153)
Q Consensus 46 ~~~rr~~L~~ni~~fr~~L~~~G~~~~~~-----s~SPIiPV~~g~~~~~~~~a------~~i~~P-tVP---------- 103 (153)
.++..++.+++..++++.|.+.|+.+... ....++++.+.+.+...+.. ..+.|| .+.
T Consensus 245 ~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~GI~~~~~~~~~~~~~~~~~~~~~ 324 (367)
T 3nyt_A 245 FEEEIALRQKVAAEYDLSLKQVGIGTPFIEVNNISVYAQYTVRMDNRESVQASLKAAGVPTAVHYPIPLNKQPAVADEKA 324 (367)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTEECCCSSEEEECSSHHHHHHHHHHHTCCCBCSCSSCGGGSGGGCCTTC
T ss_pred HHHHHHHHHHHHHHHHHHhccCCeeccCCCCCCceeeEEEEEEeCCHHHHHHHHHHCCCceeccCCCccccChhhhccCC
Confidence 36677888899999999999987654211 11236677766544444433 222344 111
Q ss_pred -------CCCceEEEEeeCCCCHHHHHHHHHHHHHHHHhc
Q psy5049 104 -------LNDGLSLYESSHLRSANLWNRPHSPSLMAVFRG 136 (153)
Q Consensus 104 -------~g~~RlRI~lsA~HT~edId~L~~~~L~~~~~~ 136 (153)
.....+|+.++...|+|||+++++ +++.++..
T Consensus 325 ~~~~~~~~~~~~l~lp~~~~~t~~~i~~v~~-~~~~~~~~ 363 (367)
T 3nyt_A 325 KLPVGDKAATQVMSLPMHPYLDTASIKIICA-ALTNLEHH 363 (367)
T ss_dssp CCHHHHHHHHHEEEECCCTTCCHHHHHHHHH-HHHC----
T ss_pred CChHHHHHHhCeEEccCCCCCCHHHHHHHHH-HHHHHhhc
Confidence 114578999999999999999999 88877643
No 107
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=95.27 E-value=0.071 Score=43.42 Aligned_cols=88 Identities=5% Similarity=-0.027 Sum_probs=56.2
Q ss_pred hHHHHHHHHHHHHHHHHHHhC-CCcccCCCC---CCeEEEEcCC--chHHHhcc-ccccCCCC-----------------
Q psy5049 47 IRRISVLAHNTRYFRRKLNRL-GLIVYGHRD---SPVVPVLVFF--FSKVGQTS-IGLGVEQT----------------- 102 (153)
Q Consensus 47 ~~rr~~L~~ni~~fr~~L~~~-G~~~~~~s~---SPIiPV~~g~--~~~~~~~a-~~i~~PtV----------------- 102 (153)
++.+++++++..++++.|.+. |+.+..... ..++.+.+.. .....+.. .....|..
T Consensus 283 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~i~v~~g~~~~~~~~~~~~~~~~~g 362 (423)
T 3lvm_A 283 ATEMERLRGLRNRLWNGIKDIEEVYLNGDLEHGAPNILNVSFNYVEGESLIMALKDLAVSSGSACTSASLEPSYVLRALG 362 (423)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSTTEEEESCSTTBCTTEEEEEETTSCHHHHHHHTTTEECBCCCC-----CCCCHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCeEEEEeCCCCHHHHHHHHhhheeccCccccCCCccccHHHHHhC
Confidence 677888999999999999887 765543221 2466666632 22222222 11111110
Q ss_pred -C--CCCceEEEEeeCCCCHHHHHHHHHHHHHHHHh
Q psy5049 103 -A--LNDGLSLYESSHLRSANLWNRPHSPSLMAVFR 135 (153)
Q Consensus 103 -P--~g~~RlRI~lsA~HT~edId~L~~~~L~~~~~ 135 (153)
+ .+...+||+++..+|+||++++++ +|+.+.+
T Consensus 363 ~~~~~~~~~iRi~~~~~~t~e~i~~~~~-~l~~~~~ 397 (423)
T 3lvm_A 363 LNDELAHSSIRFSLGRFTTEEEIDYTIE-LVRKSIG 397 (423)
T ss_dssp CCHHHHHTEEEEECCTTCCHHHHHHHHH-HHHHHHH
T ss_pred CCccccCceEEEECCCCCCHHHHHHHHH-HHHHHHH
Confidence 0 114789999999999999999999 7766554
No 108
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=95.23 E-value=0.043 Score=46.21 Aligned_cols=84 Identities=7% Similarity=0.032 Sum_probs=57.4
Q ss_pred hHHHHHHHHHHHHHHHHHHhC--CCc--c-cCCCCCCeEEEEcCCchHHHhcc------ccccCCCCCCCCceEEEEeeC
Q psy5049 47 IRRISVLAHNTRYFRRKLNRL--GLI--V-YGHRDSPVVPVLVFFFSKVGQTS------IGLGVEQTALNDGLSLYESSH 115 (153)
Q Consensus 47 ~~rr~~L~~ni~~fr~~L~~~--G~~--~-~~~s~SPIiPV~~g~~~~~~~~a------~~i~~PtVP~g~~RlRI~lsA 115 (153)
++..++++++..++++.|.+. ++. + ...+...++.+-+.+.....++. ..+..|. |...+|++++.
T Consensus 351 ~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~---g~~~iRi~~~~ 427 (449)
T 2cjg_A 351 EGLFERAVQHGKYLRARLDELAADFPAVVLDPRGRGLMCAFSLPTTADRDELIRQLWQRAVIVLPA---GADTVRFRPPL 427 (449)
T ss_dssp HTHHHHHHHHHHHHHHHHHHHHHHSTTTSEEEEEETTEEEEECSSHHHHHHHHHHHHHTTEECEEE---TTTEEEECCCT
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEeeccEEEEEEECChHHHHHHHHHHHHCCeEEecC---CCCEEEEECCC
Confidence 567899999999999999865 222 1 01244678888776532222222 2223332 56899999999
Q ss_pred CCCHHHHHHHHHHHHHHHH
Q psy5049 116 LRSANLWNRPHSPSLMAVF 134 (153)
Q Consensus 116 ~HT~edId~L~~~~L~~~~ 134 (153)
.+|+|||+++++ .|+.+.
T Consensus 428 ~~t~e~i~~~l~-~l~~~l 445 (449)
T 2cjg_A 428 TVSTAEIDAAIA-AVRSAL 445 (449)
T ss_dssp TCCHHHHHHHHH-HHHHHH
T ss_pred CCCHHHHHHHHH-HHHHHH
Confidence 999999999998 776654
No 109
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=95.23 E-value=0.035 Score=45.09 Aligned_cols=83 Identities=12% Similarity=-0.048 Sum_probs=56.8
Q ss_pred hHHHHHHHHHHHHHHHHHHhCCCccc--CCCCCCeEEEEcCC-chHHHhcc----ccccCCCCCCCCceEEEEeeCCCCH
Q psy5049 47 IRRISVLAHNTRYFRRKLNRLGLIVY--GHRDSPVVPVLVFF-FSKVGQTS----IGLGVEQTALNDGLSLYESSHLRSA 119 (153)
Q Consensus 47 ~~rr~~L~~ni~~fr~~L~~~G~~~~--~~s~SPIiPV~~g~-~~~~~~~a----~~i~~PtVP~g~~RlRI~lsA~HT~ 119 (153)
.+.+++++++..++++.|.+.+.... ..+.++++.+.+.+ .....+.. .....| .+...+||+++..+|+
T Consensus 304 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~l~~~~gi~v~~---~~~~~iRi~~~~~~~~ 380 (395)
T 1vef_A 304 TRLWERAAELGPWFMEKLRAIPSPKIREVRGMGLMVGLELKEKAAPYIARLEKEHRVLALQ---AGPTVIRFLPPLVIEK 380 (395)
T ss_dssp HTTHHHHHHHHHHHHHHHHTSCCTTEEEEEEETTEEEEEESSCSHHHHHHHHHHHCEECEE---SSTTEEEECCCTTCCH
T ss_pred CCHHHHHHHHHHHHHHHHHHhhcCceEEEEEEEEEEEEEEcChHHHHHHHHHHHCCeEEec---CCCCEEEEeCCCCCCH
Confidence 45788999999999999998875321 12345788887754 22222211 111222 2568899999999999
Q ss_pred HHHHHHHHHHHHHH
Q psy5049 120 NLWNRPHSPSLMAV 133 (153)
Q Consensus 120 edId~L~~~~L~~~ 133 (153)
+|++++++ +|+.+
T Consensus 381 ~~i~~~~~-~l~~~ 393 (395)
T 1vef_A 381 EDLERVVE-AVRAV 393 (395)
T ss_dssp HHHHHHHH-HHHHH
T ss_pred HHHHHHHH-HHHHH
Confidence 99999988 77654
No 110
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=95.21 E-value=0.069 Score=42.91 Aligned_cols=84 Identities=8% Similarity=-0.057 Sum_probs=52.2
Q ss_pred hHHHHHHHHHHHHHHHHHHhCCCcccCCCCCCeEEEEcC-CchHHHhcc-----ccccCCC---CCCCCceEEEEeeCCC
Q psy5049 47 IRRISVLAHNTRYFRRKLNRLGLIVYGHRDSPVVPVLVF-FFSKVGQTS-----IGLGVEQ---TALNDGLSLYESSHLR 117 (153)
Q Consensus 47 ~~rr~~L~~ni~~fr~~L~~~G~~~~~~s~SPIiPV~~g-~~~~~~~~a-----~~i~~Pt---VP~g~~RlRI~lsA~H 117 (153)
++.+++++++..++.+.|.+.|+.+.......++.+-+. +.....+.. +.+ .|. -+.+...+||+++ +
T Consensus 276 ~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v-~~g~~f~~~~~~~~Ri~~~--~ 352 (370)
T 2z61_A 276 NSMIKEFDRRRRLVLKYVKDFGWEVNNPIGAYYVFPNIGEDGREFAYKLLKEKFVAL-TPGIGFGSKGKNYIRISYA--N 352 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCBCCCCCBTTEECCBCSSCHHHHHHHHHHHHCEEC-EEGGGGCGGGSSBEEEECC--S
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCeecCCCcceEEEEecCCCHHHHHHHHHHhCCEEE-eCchhhCCCCCCEEEEEEe--C
Confidence 557888999999999999988876643222333333443 222222211 111 111 1124678999999 7
Q ss_pred CHHHHHHHHHHHHHHHH
Q psy5049 118 SANLWNRPHSPSLMAVF 134 (153)
Q Consensus 118 T~edId~L~~~~L~~~~ 134 (153)
++++|+++++ .++.+.
T Consensus 353 ~~~~i~~~~~-~l~~~l 368 (370)
T 2z61_A 353 SYENIKEGLE-RIKEFL 368 (370)
T ss_dssp CHHHHHHHHH-HHHHHH
T ss_pred CHHHHHHHHH-HHHHHH
Confidence 9999999888 666543
No 111
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=95.18 E-value=0.055 Score=42.89 Aligned_cols=82 Identities=16% Similarity=0.087 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHHHHHHHhCCCccc-CCCCCCeEEEEcCC----chHHHhcc----ccccCCCCCCCCceEEEEeeCCCCH
Q psy5049 49 RISVLAHNTRYFRRKLNRLGLIVY-GHRDSPVVPVLVFF----FSKVGQTS----IGLGVEQTALNDGLSLYESSHLRSA 119 (153)
Q Consensus 49 rr~~L~~ni~~fr~~L~~~G~~~~-~~s~SPIiPV~~g~----~~~~~~~a----~~i~~PtVP~g~~RlRI~lsA~HT~ 119 (153)
..++..++..++++.|.+.|+.+. ..+.+.++.+-+.+ .....+.. +.++ | -+...+|++++..+|+
T Consensus 254 ~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~-~---~~~~~iRl~~~~~~~~ 329 (347)
T 1jg8_A 254 RLKEDHENARFLALKLKEIGYSVNPEDVKTNMVILRTDNLKVNAHGFIEALRNSGVLAN-A---VSDTEIRLVTHKDVSR 329 (347)
T ss_dssp THHHHHHHHHHHHHHHHHHTCBCCGGGCCSSEEEEECTTSSSCHHHHHHHHHHHTEECE-E---EETTEEEEECCTTSCH
T ss_pred HHHHHHHHHHHHHHHHHhcCceeccCCCcceEEEEEcccccCCHHHHHHHHHHCCCEEe-c---CCCCeEEEEeCCCCCH
Confidence 344556788999999988777541 23456777776652 22222222 2222 2 2356799999999999
Q ss_pred HHHHHHHHHHHHHHHh
Q psy5049 120 NLWNRPHSPSLMAVFR 135 (153)
Q Consensus 120 edId~L~~~~L~~~~~ 135 (153)
||++++++ +|+.+.+
T Consensus 330 e~i~~~~~-~l~~~l~ 344 (347)
T 1jg8_A 330 NDIEEALN-IFEKLFR 344 (347)
T ss_dssp HHHHHHHH-HHHHHHH
T ss_pred HHHHHHHH-HHHHHHH
Confidence 99999998 7776543
No 112
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=95.12 E-value=0.15 Score=41.08 Aligned_cols=84 Identities=7% Similarity=-0.108 Sum_probs=52.6
Q ss_pred chHHHHHHHHHHHHHHHHHHhCCCcccCCCCCCeEEEEcCC--chHHHh-cc-------ccccCCCC-----CCCCceEE
Q psy5049 46 GIRRISVLAHNTRYFRRKLNRLGLIVYGHRDSPVVPVLVFF--FSKVGQ-TS-------IGLGVEQT-----ALNDGLSL 110 (153)
Q Consensus 46 ~~~rr~~L~~ni~~fr~~L~~~G~~~~~~s~SPIiPV~~g~--~~~~~~-~a-------~~i~~PtV-----P~g~~RlR 110 (153)
..+.+++++++..++.+.|.+. +.+.....+.++.+-+.. ...... +. .+..+..+ +.+...+|
T Consensus 296 ~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~~~~~iR 374 (396)
T 3jtx_A 296 VIDNRRLYQEKFERVIPILQQV-FDVKLPDASFYIWLKVPDGDDLAFARNLWQKAAIQVLPGRFLARDTEQGNPGEGYVR 374 (396)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTT-SCCCCCSSSSEEEEECTTSCHHHHHHHHHHHHCEECEEGGGGCCCCTTCCTTTTEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHhc-CCccCCCeeEEEEEECCCCCHHHHHHHHHHHCCEEEeCChHhCCcccccCCCCCeEE
Confidence 3677888999999999999875 333223335566666653 222221 21 11122232 35678999
Q ss_pred EEeeCCCCHHHHHHHHHHHHHHH
Q psy5049 111 YESSHLRSANLWNRPHSPSLMAV 133 (153)
Q Consensus 111 I~lsA~HT~edId~L~~~~L~~~ 133 (153)
|+++. |+++|+++++ .|..+
T Consensus 375 is~~~--~~~~i~~~l~-~l~~~ 394 (396)
T 3jtx_A 375 IALVA--DVATCVKAAE-DIVSL 394 (396)
T ss_dssp EECCS--CHHHHHHHHH-HHHHH
T ss_pred EEEcC--CHHHHHHHHH-HHHHH
Confidence 99876 9999999887 66543
No 113
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=95.12 E-value=0.13 Score=41.55 Aligned_cols=87 Identities=11% Similarity=0.021 Sum_probs=54.8
Q ss_pred chHHHHHHHHHHHHHHHHHHhCCCcccCCCC-CCeEEEEcCC----chHHHhc-c----ccc---cCCCCCCCCceEEEE
Q psy5049 46 GIRRISVLAHNTRYFRRKLNRLGLIVYGHRD-SPVVPVLVFF----FSKVGQT-S----IGL---GVEQTALNDGLSLYE 112 (153)
Q Consensus 46 ~~~rr~~L~~ni~~fr~~L~~~G~~~~~~s~-SPIiPV~~g~----~~~~~~~-a----~~i---~~PtVP~g~~RlRI~ 112 (153)
..+.+++++++..++.+.|.+.|+.....+. +..+.+-+.. ....... . +.+ .....+.+...+||+
T Consensus 281 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~iRis 360 (391)
T 3h14_A 281 LQANLDVYKANRKLMLERLPKAGFTRIAPPDGAFYVYADVSDLTDDSRAFAAEILEKAGVAVTPGLDFDPERGAGTLRFS 360 (391)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCCCBCCCCBTTEEEEECTTTCSCHHHHHHHHHHHHCEECEEGGGTCTTTGGGEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCcccCCCeeEEEEEecCccCCCHHHHHHHHHHHCCEEEcCchhhCCCCCCCeEEEE
Confidence 3677888999999999999988875422222 3444444432 2222221 1 111 222334567899999
Q ss_pred eeCCCCHHHHHHHHHHHHHHHHh
Q psy5049 113 SSHLRSANLWNRPHSPSLMAVFR 135 (153)
Q Consensus 113 lsA~HT~edId~L~~~~L~~~~~ 135 (153)
++. ++|||+++++ .|..+.+
T Consensus 361 ~~~--~~~~i~~~l~-~l~~~~~ 380 (391)
T 3h14_A 361 YAR--ATADIEEGLD-RLEAFMQ 380 (391)
T ss_dssp CCS--CHHHHHHHHH-HHHHHHH
T ss_pred ecC--CHHHHHHHHH-HHHHHHH
Confidence 987 8999999998 7765543
No 114
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=95.10 E-value=0.25 Score=40.40 Aligned_cols=86 Identities=10% Similarity=-0.053 Sum_probs=53.8
Q ss_pred hHHHHHHHHHHHHHHHHHHhCCCcc-cCCCCCCeEEEEcC--CchHHHhcc--c------cc-cCC------CCCCCCce
Q psy5049 47 IRRISVLAHNTRYFRRKLNRLGLIV-YGHRDSPVVPVLVF--FFSKVGQTS--I------GL-GVE------QTALNDGL 108 (153)
Q Consensus 47 ~~rr~~L~~ni~~fr~~L~~~G~~~-~~~s~SPIiPV~~g--~~~~~~~~a--~------~i-~~P------tVP~g~~R 108 (153)
++.+++++++..++.+.|.+.|+.+ .....+.++.+-+. +.....+.. . .| ..| ..+.+...
T Consensus 297 ~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~gi~v~~g~~f~~~~~~~~~~ 376 (409)
T 2gb3_A 297 DFVRETYRERVETVLKKLEEHGLKRFTKPSGAFYITAELPVEDAEEFARWMLTDFNMDGETTMVAPLRGFYLTPGLGKKE 376 (409)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCBCCCSBSSEEEEECSSSCHHHHHHHHHHSCCBTTEEEECEEGGGGCSSTTTTSSE
T ss_pred HHHHHHHHHHHHHHHHHHHHcCceeeeCCCeeEEEEEEeCCCCHHHHHHHHHhccccccCcEEEeCchHhCCCCCCCCCE
Confidence 5668889999999999999888765 43222334443443 222222111 1 22 112 12345788
Q ss_pred EEEEeeCCCCHHHHHHHHHHHHHHHHh
Q psy5049 109 SLYESSHLRSANLWNRPHSPSLMAVFR 135 (153)
Q Consensus 109 lRI~lsA~HT~edId~L~~~~L~~~~~ 135 (153)
+||+++ +|+|||+++++ .++.+.+
T Consensus 377 iRis~~--~~~e~i~~~~~-~l~~~l~ 400 (409)
T 2gb3_A 377 IRIACV--LEKDLLSRAID-VLMEGLK 400 (409)
T ss_dssp EEEECC--SCHHHHHHHHH-HHHHHHH
T ss_pred EEEEeC--CCHHHHHHHHH-HHHHHHH
Confidence 999988 99999999998 7765543
No 115
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=95.07 E-value=0.02 Score=45.41 Aligned_cols=85 Identities=12% Similarity=0.010 Sum_probs=55.7
Q ss_pred chHHHHHHHHHHHHHHHHHHhCC---------------CcccC---CCCCCeEEEEcCCchHHHhcc----c---cc---
Q psy5049 46 GIRRISVLAHNTRYFRRKLNRLG---------------LIVYG---HRDSPVVPVLVFFFSKVGQTS----I---GL--- 97 (153)
Q Consensus 46 ~~~rr~~L~~ni~~fr~~L~~~G---------------~~~~~---~s~SPIiPV~~g~~~~~~~~a----~---~i--- 97 (153)
.+++++++.+|+..+.+.+++.. +.+.+ .+.++++.+.+.+.+.+..+. . ++
T Consensus 196 ~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gI~~~~~s~g 275 (331)
T 1pff_A 196 LDMRVKRAAENAQKVAEFLHEHKAVKKVYYPGLPDHPGHEIAKKQMKMFGSMIAFDVDGLEKAKKVLDNCHVVSLAVSLG 275 (331)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCTTCCCEECTTSTTSTTHHHHHHHCSSCCSEEEEECSSHHHHHHHHHTCSSSEECSSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECCHHHHHHHHHhCCCceeccCCC
Confidence 35677788889998888887542 11100 124679999887555554443 1 22
Q ss_pred ------cCCCCC--------------CCCceEEEEeeCCCCHHHHHHHHHHHHH
Q psy5049 98 ------GVEQTA--------------LNDGLSLYESSHLRSANLWNRPHSPSLM 131 (153)
Q Consensus 98 ------~~PtVP--------------~g~~RlRI~lsA~HT~edId~L~~~~L~ 131 (153)
.+|+.+ .+.+.+||+++..+|++||+.+++ +++
T Consensus 276 ~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~~~~t~~~i~~l~~-~l~ 328 (331)
T 1pff_A 276 GPESLIQHPASMTHAGVPKEEREAAGLTDNLIRLSVGCENVQDIIDDLKQ-ALD 328 (331)
T ss_dssp SSSCEEECHHHHTSTTSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHH-HHH
T ss_pred CcceeeecchhhcccccCHHHHHhcCCCCCeEEEEEecCCHHHHHHHHHH-HHH
Confidence 233321 125899999999999999999888 665
No 116
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=95.06 E-value=0.12 Score=42.03 Aligned_cols=87 Identities=9% Similarity=-0.107 Sum_probs=55.0
Q ss_pred chHHHHHHHHHHHHHHHHHHhC--CCcccCCCCCCeEEEEcCC---chHHHhcc--c-cc-cCCC----C-CCCCceEEE
Q psy5049 46 GIRRISVLAHNTRYFRRKLNRL--GLIVYGHRDSPVVPVLVFF---FSKVGQTS--I-GL-GVEQ----T-ALNDGLSLY 111 (153)
Q Consensus 46 ~~~rr~~L~~ni~~fr~~L~~~--G~~~~~~s~SPIiPV~~g~---~~~~~~~a--~-~i-~~Pt----V-P~g~~RlRI 111 (153)
..+.+++++++..++.+.|.+. |+.+...+.+.++.+-+.+ .....+.. . .| ..|. . +.+...+||
T Consensus 301 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~~~~~~~~~~~iRi 380 (407)
T 2zc0_A 301 LEGALLGYKEKRDIMLKALENHLPNAEFTKPIAGMFVMFFLPEGADGISFANELMEREGVVVVPGKPFYTDESGKNAIRL 380 (407)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHCTTSCBCCCSBSSEEEEECSTTCCHHHHHHHHHHHTCEECBCSGGGCSSSCCTTEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCcEEEEEEcCCCCCHHHHHHHHHHhCCeEEECchhccCCCCCCCeEEE
Confidence 3567888899999999999874 5554333334566666643 22222221 1 22 2221 1 124678999
Q ss_pred EeeCCCCHHHHHHHHHHHHHHHH
Q psy5049 112 ESSHLRSANLWNRPHSPSLMAVF 134 (153)
Q Consensus 112 ~lsA~HT~edId~L~~~~L~~~~ 134 (153)
+++.. |++|++++++ .|+.+.
T Consensus 381 s~~~~-~~~~i~~~~~-~l~~~l 401 (407)
T 2zc0_A 381 NFSRP-SKEEIPIGIK-KLAKLY 401 (407)
T ss_dssp ECSSS-CTTHHHHHHH-HHHHHH
T ss_pred EeCCC-CHHHHHHHHH-HHHHHH
Confidence 99877 9999999998 776544
No 117
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=95.05 E-value=0.12 Score=43.53 Aligned_cols=86 Identities=7% Similarity=-0.118 Sum_probs=54.4
Q ss_pred hHHHHHHHHHHHHHHHHHHhC---CCcccCCCCCCeEEEEcCC---chHHHhcc--------ccccCCCCCCCCceEEEE
Q psy5049 47 IRRISVLAHNTRYFRRKLNRL---GLIVYGHRDSPVVPVLVFF---FSKVGQTS--------IGLGVEQTALNDGLSLYE 112 (153)
Q Consensus 47 ~~rr~~L~~ni~~fr~~L~~~---G~~~~~~s~SPIiPV~~g~---~~~~~~~a--------~~i~~PtVP~g~~RlRI~ 112 (153)
.+.++.++++..++.+.|.+. |+.+.....+..+.+-+.+ .......+ .+..|...+.+...+|++
T Consensus 343 ~~~~~~~~~~~~~l~~~L~~~~~~g~~~~~p~~g~~~~v~~~~~~~~~~l~~~l~~~gV~v~pg~~f~~~~~~~~~iRls 422 (448)
T 3aow_A 343 PEIRKFYKPRRDAMLEALEEFMPEGVKWTKPEGGMFIWVTLPDGIDSKKMLERAIKKGVAYVPGEAFYAHRDVKNTMRLN 422 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCTTCEECCCSBSSEEEEECSTTCCHHHHHHHHHHTTEECEEGGGGSTTCCCCSEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCeEEeCCCccEEEEEEcCCCCCHHHHHHHHHHCCcEEEcchhhcCCCCCCCEEEEE
Confidence 456777788999999999875 6654333335666666653 22222221 111232223456789999
Q ss_pred eeCCCCHHHHHHHHHHHHHHHH
Q psy5049 113 SSHLRSANLWNRPHSPSLMAVF 134 (153)
Q Consensus 113 lsA~HT~edId~L~~~~L~~~~ 134 (153)
++. .|+|||+..++ .|..+.
T Consensus 423 ~~~-~~~e~i~~~~~-~L~~~l 442 (448)
T 3aow_A 423 FTY-VDEDKIMEGIK-RLAETI 442 (448)
T ss_dssp CSS-SCTHHHHHHHH-HHHHHH
T ss_pred eCC-CCHHHHHHHHH-HHHHHH
Confidence 987 49999999888 776543
No 118
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=95.02 E-value=0.11 Score=43.17 Aligned_cols=88 Identities=9% Similarity=0.040 Sum_probs=56.7
Q ss_pred hHHHHHHHHHHHHHHHHHHhCCCcccCCCCCCeEEEEcC------CchH------HHhc-c---ccc---c--C-C----
Q psy5049 47 IRRISVLAHNTRYFRRKLNRLGLIVYGHRDSPVVPVLVF------FFSK------VGQT-S---IGL---G--V-E---- 100 (153)
Q Consensus 47 ~~rr~~L~~ni~~fr~~L~~~G~~~~~~s~SPIiPV~~g------~~~~------~~~~-a---~~i---~--~-P---- 100 (153)
++..++..++..++++.|.+.|+.+.....+..+.+.+. +... +..+ . +.+ . | |
T Consensus 312 ~~~~~~~~~~~~~l~~~L~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~~~~~g~~~~~~~~~ 391 (456)
T 2ez2_A 312 YEYIEHRVKQVRYLGDKLKAAGVPIVEPVGGHAVFLDARRFCEHLTQDEFPAQSLAASIYVETGVRSMERGIISAGRNNV 391 (456)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCBCSSCCSSEEEEEHHHHTTTSCGGGCHHHHHHHHHHHHHSEECEEESHHHHCBCTT
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCccccCCCceEEEEEhHHhcCCCChhhccHHHHHHHHHHhcCeeeecccccccccCcc
Confidence 467778888999999999988886543344666666542 1111 1111 0 111 1 1 1
Q ss_pred ---CCCCCCceEEEEeeCC-CCHHHHHHHHHHHHHHHHh
Q psy5049 101 ---QTALNDGLSLYESSHL-RSANLWNRPHSPSLMAVFR 135 (153)
Q Consensus 101 ---tVP~g~~RlRI~lsA~-HT~edId~L~~~~L~~~~~ 135 (153)
..+.+...+||+++.. +|++||+++++ +|+.+.+
T Consensus 392 ~g~~~~~~~~~iRis~~~~~~t~e~i~~~~~-~l~~~l~ 429 (456)
T 2ez2_A 392 TGEHHRPKLETVRLTIPRRVYTYAHMDVVAD-GIIKLYQ 429 (456)
T ss_dssp TCSBCCCSCCEEEEECCTTTCCHHHHHHHHH-HHHHHHH
T ss_pred ccccccCCCCeEEEEeCCCCCCHHHHHHHHH-HHHHHHh
Confidence 1233457899999987 99999999999 8876654
No 119
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=94.98 E-value=0.095 Score=42.28 Aligned_cols=86 Identities=9% Similarity=0.039 Sum_probs=53.0
Q ss_pred hHHHHHHHHHHHHHHHHHHhCCCcccCCCCCC-eEEEEcC----CchHHHhcc----ccccCCCC---CCCCceEEEEee
Q psy5049 47 IRRISVLAHNTRYFRRKLNRLGLIVYGHRDSP-VVPVLVF----FFSKVGQTS----IGLGVEQT---ALNDGLSLYESS 114 (153)
Q Consensus 47 ~~rr~~L~~ni~~fr~~L~~~G~~~~~~s~SP-IiPV~~g----~~~~~~~~a----~~i~~PtV---P~g~~RlRI~ls 114 (153)
++.+++++++..++.+.|.+.|+.+.. ++.. .+.+-+. +.....+.. .....|.. +.+...+||+++
T Consensus 288 ~~~~~~~~~~~~~l~~~L~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~ 366 (389)
T 1gd9_A 288 EEMRKEYDRRRKLVWKRLNEMGLPTVK-PKGAFYIFPRIRDTGLTSKKFSELMLKEARVAVVPGSAFGKAGEGYVRISYA 366 (389)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCCC-CCBTTEECCBCGGGTCCHHHHHHHHHHHTCEECEEGGGGCGGGTTBEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCeecC-CCeeeEEEEeccCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEec
Confidence 567888999999999999988887643 3333 3333332 222222211 11111211 234678999998
Q ss_pred CCCCHHHHHHHHHHHHHHHHhc
Q psy5049 115 HLRSANLWNRPHSPSLMAVFRG 136 (153)
Q Consensus 115 A~HT~edId~L~~~~L~~~~~~ 136 (153)
. ++++|+.+++ .+..+.+.
T Consensus 367 ~--~~~~i~~~l~-~l~~~~~~ 385 (389)
T 1gd9_A 367 T--AYEKLEEAMD-RMERVLKE 385 (389)
T ss_dssp S--CHHHHHHHHH-HHHHHHHH
T ss_pred C--CHHHHHHHHH-HHHHHHHh
Confidence 5 9999999988 77665543
No 120
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=94.95 E-value=0.07 Score=45.51 Aligned_cols=90 Identities=8% Similarity=-0.123 Sum_probs=57.0
Q ss_pred chHHHHHHHHHHHHHHHHHHhC-CCcccC--CCCCCeEEEEc-CCc------------------hHHHhcc----ccccC
Q psy5049 46 GIRRISVLAHNTRYFRRKLNRL-GLIVYG--HRDSPVVPVLV-FFF------------------SKVGQTS----IGLGV 99 (153)
Q Consensus 46 ~~~rr~~L~~ni~~fr~~L~~~-G~~~~~--~s~SPIiPV~~-g~~------------------~~~~~~a----~~i~~ 99 (153)
..++.++..++..+|.+.|.+. |+.+.. .+...++.+.. +.. ....+.. ..+..
T Consensus 384 ~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~p~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~ 463 (504)
T 2okj_A 384 FENQINKCLELAEYLYAKIKNREEFEMVFNGEPEHTNVCFWYIPQSLRGVPDSPQRREKLHKVAPKIKALMMESGTTMVG 463 (504)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCTTEEESSSSCCSSSCEEEEECCGGGSSCCCCHHHHHHHTTHHHHHHHHHHHHTSCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCEEEEecCCCCeEEEEEEEeCccccccccchhhHHHHHHHHHHHHHHHHhCCcEEEE
Confidence 3567788999999999999986 777653 24455655543 211 0111111 12222
Q ss_pred CCCCCCC-ceEEEEee-CCCCHHHHHHHHHHHHHHHHhc
Q psy5049 100 EQTALND-GLSLYESS-HLRSANLWNRPHSPSLMAVFRG 136 (153)
Q Consensus 100 PtVP~g~-~RlRI~ls-A~HT~edId~L~~~~L~~~~~~ 136 (153)
++...|. ..+|++++ ..+|++||+++++ +++.+.+.
T Consensus 464 ~~~~~~~~~~lRis~~~~~~t~edi~~~~~-~l~~~~~~ 501 (504)
T 2okj_A 464 YQPQGDKANFFRMVISNPAATQSDIDFLIE-EIERLGQD 501 (504)
T ss_dssp EEEETTEEEEEEECCCCTTCCHHHHHHHHH-HHHHHHTC
T ss_pred eeEECCceEEEEEEeCCCCCCHHHHHHHHH-HHHHHHHH
Confidence 2322343 58999996 8999999999998 77766543
No 121
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=94.94 E-value=0.16 Score=40.70 Aligned_cols=83 Identities=12% Similarity=-0.033 Sum_probs=54.0
Q ss_pred chHHHHHHHHHHHHHHHHHHhCCCcccCCCCCCeEEEEcCCchHHHhcc-----ccc---cCCCC-CCCCceEEEEeeCC
Q psy5049 46 GIRRISVLAHNTRYFRRKLNRLGLIVYGHRDSPVVPVLVFFFSKVGQTS-----IGL---GVEQT-ALNDGLSLYESSHL 116 (153)
Q Consensus 46 ~~~rr~~L~~ni~~fr~~L~~~G~~~~~~s~SPIiPV~~g~~~~~~~~a-----~~i---~~PtV-P~g~~RlRI~lsA~ 116 (153)
..+.+++++++..++.+.|+ |+.. .+.+.++.+-+.+........ +.+ .+..+ +.+...+||+++.
T Consensus 282 ~~~~~~~~~~~~~~l~~~l~--~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~~- 356 (376)
T 3ezs_A 282 AEFFRNIYANNLKLARKIFK--NTLI--YPYSFYVYLPVQNGENFAKTLYQNEGIITLPALYLGRNRIGADYVRLALVY- 356 (376)
T ss_dssp HHHHHHHHHHHHHHHHHHST--TCCC--CSBSSEEEEECSCHHHHHHHHHHHHCCBCEEGGGGCSTTTTTTEEEEECCS-
T ss_pred HHHHHHHHHHHHHHHHHHhc--CCCC--CCcceEEEEECCCHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCeEEEEEcC-
Confidence 36778888888888888887 6642 344566666665433332221 111 12222 4567899999874
Q ss_pred CCHHHHHHHHHHHHHHHHh
Q psy5049 117 RSANLWNRPHSPSLMAVFR 135 (153)
Q Consensus 117 HT~edId~L~~~~L~~~~~ 135 (153)
|++||+++++ .|..+.+
T Consensus 357 -~~~~i~~~l~-~l~~~l~ 373 (376)
T 3ezs_A 357 -DTPLLEKPLE-IIETYRE 373 (376)
T ss_dssp -CHHHHHHHHH-HHHHHHC
T ss_pred -CHHHHHHHHH-HHHHHHH
Confidence 9999999988 7776543
No 122
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=94.87 E-value=0.11 Score=41.94 Aligned_cols=82 Identities=15% Similarity=0.021 Sum_probs=51.9
Q ss_pred chHHHHHHHHHHHHHHHHHHhCC--CcccCCCCCCeEEEEcCCchHHHhcc----ccccC-CCCCCCCceEEEEeeCCCC
Q psy5049 46 GIRRISVLAHNTRYFRRKLNRLG--LIVYGHRDSPVVPVLVFFFSKVGQTS----IGLGV-EQTALNDGLSLYESSHLRS 118 (153)
Q Consensus 46 ~~~rr~~L~~ni~~fr~~L~~~G--~~~~~~s~SPIiPV~~g~~~~~~~~a----~~i~~-PtVP~g~~RlRI~lsA~HT 118 (153)
.++.+++++++..++.+.|.+.| +.+ ..+.+..+.+-+.+.....+.. +.+++ -..+.....+||+++ +
T Consensus 265 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~g~~~~~~~~iRis~~---~ 340 (356)
T 1fg7_A 265 MRERVAQIIAEREYLIAALKEIPCVEQV-FDSETNYILARFKASSAVFKSLWDQGIILRDQNKQPSLSGCLRITVG---T 340 (356)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSTTEEEE-CCCSSSEEEEEETTHHHHHHHHHHTTEECEECTTSTTCTTEEEEECC---C
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCceEE-CCCCCeEEEEECCCHHHHHHHHHHCCEEEEECCCCCCCCCeEEEEeC---C
Confidence 45677888899999999999887 333 2355667666665433333322 22332 111111357999986 6
Q ss_pred HHHHHHHHHHHHHH
Q psy5049 119 ANLWNRPHSPSLMA 132 (153)
Q Consensus 119 ~edId~L~~~~L~~ 132 (153)
++|++++++ +|+.
T Consensus 341 ~~e~~~~~~-~l~~ 353 (356)
T 1fg7_A 341 REESQRVID-ALRA 353 (356)
T ss_dssp HHHHHHHHH-HHHT
T ss_pred HHHHHHHHH-HHHh
Confidence 899999888 6653
No 123
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=94.83 E-value=0.078 Score=44.37 Aligned_cols=85 Identities=9% Similarity=-0.029 Sum_probs=55.9
Q ss_pred chHHHHHHHHHHHHHHHHHHhC-CCcccC--CCCCCeEEEEcCCchH-----------HHhcc------ccccCCCCCCC
Q psy5049 46 GIRRISVLAHNTRYFRRKLNRL-GLIVYG--HRDSPVVPVLVFFFSK-----------VGQTS------IGLGVEQTALN 105 (153)
Q Consensus 46 ~~~rr~~L~~ni~~fr~~L~~~-G~~~~~--~s~SPIiPV~~g~~~~-----------~~~~a------~~i~~PtVP~g 105 (153)
.+++.++++++..++++.|.+. ++.... .+...++.+.+.++.. +.+++ ..+..|. |
T Consensus 337 ~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~---~ 413 (448)
T 3dod_A 337 SENIVEQVAEKSKKLHFLLQDLHALPHVGDIRQLGFMCGAELVRSKETKEPYPADRRIGYKVSLKMRELGMLTRPL---G 413 (448)
T ss_dssp HTTHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHTTEECCEE---T
T ss_pred cccHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeeeEEEEEEEccCcccccccchhhHHHHHHHHHHHHCCcEEecc---C
Confidence 4678999999999999999873 221111 1235677777755311 12222 2223333 3
Q ss_pred CceEEEEeeCCCCHHHHHHHHHHHHHHHHh
Q psy5049 106 DGLSLYESSHLRSANLWNRPHSPSLMAVFR 135 (153)
Q Consensus 106 ~~RlRI~lsA~HT~edId~L~~~~L~~~~~ 135 (153)
..+||+++..+|+|||+++++ +|+.+.+
T Consensus 414 -~~iRi~~~~~~t~e~i~~~l~-~l~~~l~ 441 (448)
T 3dod_A 414 -DVIAFLPPLASTAEELSEMVA-IMKQAIH 441 (448)
T ss_dssp -TEEEECCCTTCCHHHHHHHHH-HHHHHHH
T ss_pred -CEEEEECCCCCCHHHHHHHHH-HHHHHHH
Confidence 899999999999999999998 7765543
No 124
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=94.81 E-value=0.097 Score=42.85 Aligned_cols=91 Identities=12% Similarity=-0.004 Sum_probs=56.0
Q ss_pred cchHHHHHHHHHHHHHHHHHHhCCCcccCC-----CCCCeEEEEcCCc------------------------hHHHhcc-
Q psy5049 45 SGIRRISVLAHNTRYFRRKLNRLGLIVYGH-----RDSPVVPVLVFFF------------------------SKVGQTS- 94 (153)
Q Consensus 45 ~~~~rr~~L~~ni~~fr~~L~~~G~~~~~~-----s~SPIiPV~~g~~------------------------~~~~~~a- 94 (153)
..++.+++++++..++++.|.+. +.+.+. +..+++++.+.++ ....+..
T Consensus 244 ~l~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 322 (394)
T 1o69_A 244 VLEQRVLKKREIYEWYKEFLGEY-FSFLDELENSRSNRWLSTALINFDKNELNACQKDINISQKNITLHPKISKLIEDLK 322 (394)
T ss_dssp THHHHHHHHHHHHHHHHHHHTTT-EECCCCCTTEECCCSSEEEEESCCGGGSCCCCEEEECCCCCCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhccc-ccccCCCCCCcceeEEEEEEecchhhccccccccccccccccccccCHHHHHHHHH
Confidence 34668899999999999999887 544332 1234788877632 1222221
Q ss_pred ---ccc---c-----CCCCCC----C--------CceEEEEeeCCCCHHHHHHHHHHHHHHHHhcC
Q psy5049 95 ---IGL---G-----VEQTAL----N--------DGLSLYESSHLRSANLWNRPHSPSLMAVFRGG 137 (153)
Q Consensus 95 ---~~i---~-----~PtVP~----g--------~~RlRI~lsA~HT~edId~L~~~~L~~~~~~~ 137 (153)
+.+ . .|.... + ...+|+..+..+|+||++++++ +|+.+.+.+
T Consensus 323 ~~gI~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~edi~~~~~-~l~~~~~~~ 387 (394)
T 1o69_A 323 NKQIETRPLWKAMHTQEVFKGAKAYLNGNSELFFQKGICLPSGTAMSKDDVYEISK-LILKSIKAG 387 (394)
T ss_dssp HTTCCCBCCCCCGGGCGGGTTCEEEECSHHHHHHHHEEEECCCTTCCHHHHHHHHH-HHHHHHC--
T ss_pred HcCCcccccCCccccchhhhccCCCCChHHHHHhcCeEEccCCCCCCHHHHHHHHH-HHHHHHhcc
Confidence 111 1 122221 1 0346666799999999999999 888776654
No 125
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=94.77 E-value=0.19 Score=41.12 Aligned_cols=86 Identities=10% Similarity=-0.006 Sum_probs=55.4
Q ss_pred hHHHHHHHHHHHHHHHHHHhCCCcccCCCC-CCeEEEEcCC------chHHHhcc----ccccCCC---CCCCCceEEEE
Q psy5049 47 IRRISVLAHNTRYFRRKLNRLGLIVYGHRD-SPVVPVLVFF------FSKVGQTS----IGLGVEQ---TALNDGLSLYE 112 (153)
Q Consensus 47 ~~rr~~L~~ni~~fr~~L~~~G~~~~~~s~-SPIiPV~~g~------~~~~~~~a----~~i~~Pt---VP~g~~RlRI~ 112 (153)
++.+++++++..++.+.|.+.|+.+.. +. +.++.+-+.+ ........ .....|. .+.+...+||+
T Consensus 298 ~~~~~~~~~~~~~l~~~L~~~g~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRis 376 (412)
T 2x5d_A 298 RDIARQYQQRRDVLVKGLREAGWMVEN-PKASMYVWAKIPEPYAHLGSLEFAKKLLQDAKVSVSPGIGFGDYGDDHVRFA 376 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCCCC-CSBSSEEEEECCTTTGGGCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCEecC-CCeeeEEEEEcCCccCCCCHHHHHHHHHHHCCEEEeCchhhCCCCCCeEEEE
Confidence 667888999999999999988877643 33 3356565642 22222211 1111111 12356789999
Q ss_pred eeCCCCHHHHHHHHHHHHHHHHhc
Q psy5049 113 SSHLRSANLWNRPHSPSLMAVFRG 136 (153)
Q Consensus 113 lsA~HT~edId~L~~~~L~~~~~~ 136 (153)
++. ++++|+.+++ .+..+.+.
T Consensus 377 ~~~--~~~~l~~~l~-~l~~~l~~ 397 (412)
T 2x5d_A 377 LIE--NRDRLRQAVR-GIKAMFRA 397 (412)
T ss_dssp CCS--CHHHHHHHHH-HHHHHHHH
T ss_pred ecC--CHHHHHHHHH-HHHHHHHh
Confidence 986 8999999998 77665544
No 126
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=94.77 E-value=0.11 Score=43.05 Aligned_cols=87 Identities=9% Similarity=-0.086 Sum_probs=54.4
Q ss_pred chHHHHHHHHHHHHHHHHHHhC-CCcccCCCCCCeEEEEcC--------CchHHH-hcc----ccccCCCCCCCCceEEE
Q psy5049 46 GIRRISVLAHNTRYFRRKLNRL-GLIVYGHRDSPVVPVLVF--------FFSKVG-QTS----IGLGVEQTALNDGLSLY 111 (153)
Q Consensus 46 ~~~rr~~L~~ni~~fr~~L~~~-G~~~~~~s~SPIiPV~~g--------~~~~~~-~~a----~~i~~PtVP~g~~RlRI 111 (153)
..+.++++.++..++.+.|++. |+.+.....+..+.+-+. +..... .+. +.+.+-........+||
T Consensus 322 ~~~~~~~~~~~~~~l~~~L~~~~g~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~l~~~~gV~v~~g~~~~~~~~iRi 401 (427)
T 3dyd_A 322 YHNTLSFLKSNADLCYGALAAIPGLRPVRPSGAMYLMVGIEMEHFPEFENDVEFTERLVAEQSVHCLPATCFEYPNFIRV 401 (427)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSTTEEEECCSBTTEEEEEECGGGCTTCSSHHHHHHHHHHHHCEECEEGGGGTCTTEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCceecCCCeeEEEEEecCHhhcCCCCCHHHHHHHHHHHCCEEEECCcccCCCCeEEE
Confidence 3677888999999999999987 765433344555555443 112222 221 22222122223578999
Q ss_pred EeeCCCCHHHHHHHHHHHHHHHHh
Q psy5049 112 ESSHLRSANLWNRPHSPSLMAVFR 135 (153)
Q Consensus 112 ~lsA~HT~edId~L~~~~L~~~~~ 135 (153)
+++ +++++|+++++ .|..+.+
T Consensus 402 s~~--~~~e~i~~~l~-~l~~~l~ 422 (427)
T 3dyd_A 402 VIT--VPEVMMLEACS-RIQEFCE 422 (427)
T ss_dssp ESC--SCHHHHHHHHH-HHHHHHH
T ss_pred EEC--CCHHHHHHHHH-HHHHHHH
Confidence 986 79999999988 7765544
No 127
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=94.76 E-value=0.057 Score=44.16 Aligned_cols=87 Identities=15% Similarity=0.062 Sum_probs=55.1
Q ss_pred cchHHHHHHHHHHHHHHHHHHhCCCcccCCCCCCeEEEE-cCC---chHHHh-cc---ccccCCC---CCCCCceEEEEe
Q psy5049 45 SGIRRISVLAHNTRYFRRKLNRLGLIVYGHRDSPVVPVL-VFF---FSKVGQ-TS---IGLGVEQ---TALNDGLSLYES 113 (153)
Q Consensus 45 ~~~~rr~~L~~ni~~fr~~L~~~G~~~~~~s~SPIiPV~-~g~---~~~~~~-~a---~~i~~Pt---VP~g~~RlRI~l 113 (153)
..++.+++++++..++.+.|.+.|+.+.+...++++.+- +.+ ...... +. .....|. -+.+...+||++
T Consensus 293 ~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~~g~~f~~~~~~~iRis~ 372 (400)
T 3asa_A 293 PQLEAIHYYRENSDLLRKALLATGFEVFGGEHAPYLWVKPTQANISDRDLFDFFLREYHIAITPGIGFGRSGSGFVRFSS 372 (400)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHTTCEEEECSSSSEEEEECCCTTCCTTTHHHHHHHHHSEECEEGGGGCGGGTTCEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCceEEEEeccCCCCCHHHHHHHHHHhCCEEEeChhHhCCCCCCEEEEEe
Confidence 356788999999999999999988876433346777766 542 112221 11 1111111 133567899994
Q ss_pred eCCCCHHHHHHHHHHHHHHHH
Q psy5049 114 SHLRSANLWNRPHSPSLMAVF 134 (153)
Q Consensus 114 sA~HT~edId~L~~~~L~~~~ 134 (153)
.+|+|+++++++ .|+.+.
T Consensus 373 --~~~~e~i~~~l~-~l~~~~ 390 (400)
T 3asa_A 373 --LGKREDILAACE-RLQMAP 390 (400)
T ss_dssp --CSCHHHHHHHHH-HHHC--
T ss_pred --eCCHHHHHHHHH-HHHHHH
Confidence 689999999887 665443
No 128
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=94.72 E-value=0.18 Score=40.28 Aligned_cols=85 Identities=12% Similarity=-0.022 Sum_probs=53.7
Q ss_pred chHHHHHHHHHHHHHHHHHHhC--CCcccCCCCCCeEE-EEcCC----chHHHhcc-----ccccCCC---CCCCCceEE
Q psy5049 46 GIRRISVLAHNTRYFRRKLNRL--GLIVYGHRDSPVVP-VLVFF----FSKVGQTS-----IGLGVEQ---TALNDGLSL 110 (153)
Q Consensus 46 ~~~rr~~L~~ni~~fr~~L~~~--G~~~~~~s~SPIiP-V~~g~----~~~~~~~a-----~~i~~Pt---VP~g~~RlR 110 (153)
.++++++++++..++.+.|.+. |+.+.. +....+. +-+.. .....+.. +.++ |. -+.+...+|
T Consensus 288 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~-~g~~~~~~~~~~iR 365 (391)
T 3dzz_A 288 LRELKQVLRDNFAYAREFLAKEVPEVKVLD-SNASYLAWVDISALGMNAEDFCKYLREKTGLIIS-AGNGYRGNGHEFVR 365 (391)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCTTSEECC-CCBSSEEEEECGGGCSCHHHHHHHHHHHHCEECE-ESGGGCTTGGGEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCcEEec-cCceEEEEEehhhcCCCHHHHHHHHHHhCCEEEe-CchhhCCCCCCEEE
Confidence 4678889999999999999985 776643 3334333 33332 22222211 2221 11 123568999
Q ss_pred EEeeCCCCHHHHHHHHHHHHHHHHh
Q psy5049 111 YESSHLRSANLWNRPHSPSLMAVFR 135 (153)
Q Consensus 111 I~lsA~HT~edId~L~~~~L~~~~~ 135 (153)
|+++ +++++++++++ .|..+.+
T Consensus 366 is~~--~~~~~i~~~l~-~l~~~l~ 387 (391)
T 3dzz_A 366 INLA--CPKELVIDGMQ-RLKQGVL 387 (391)
T ss_dssp EECC--SCHHHHHHHHH-HHHHHHH
T ss_pred EEec--CCHHHHHHHHH-HHHHHHH
Confidence 9998 79999999988 7766554
No 129
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=94.61 E-value=0.25 Score=40.11 Aligned_cols=82 Identities=9% Similarity=0.068 Sum_probs=52.9
Q ss_pred chHHHHHHHHHHHHHHHHHHhCCCcccCCCCCCeEEEEcC-CchHHHhcc-----ccc----cCCCCCCCCceEEEEeeC
Q psy5049 46 GIRRISVLAHNTRYFRRKLNRLGLIVYGHRDSPVVPVLVF-FFSKVGQTS-----IGL----GVEQTALNDGLSLYESSH 115 (153)
Q Consensus 46 ~~~rr~~L~~ni~~fr~~L~~~G~~~~~~s~SPIiPV~~g-~~~~~~~~a-----~~i----~~PtVP~g~~RlRI~lsA 115 (153)
.++.+++++++..++.+.|.+.|+.+.......++.+-+. +.....+.. +.+ .|.. ...+||+++.
T Consensus 295 ~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~----~~~~Ris~~~ 370 (389)
T 1o4s_A 295 NSYMVQTFKERKNFVVERLKKMGVKFVEPEGAFYLFFKVRGDDVKFCERLLEEKKVALVPGSAFLK----PGFVRLSFAT 370 (389)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCCCCCCSBSSEEEEECSSCHHHHHHHHHHHHCEECEEGGGGTC----TTEEEEECCS
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCeeecCCcceEEEEeCCCCHHHHHHHHHHHCCEEEeCchhcCC----CCeEEEEEeC
Confidence 5788999999999999999998887643222334444443 333332211 111 2221 2489999984
Q ss_pred CCCHHHHHHHHHHHHHHHH
Q psy5049 116 LRSANLWNRPHSPSLMAVF 134 (153)
Q Consensus 116 ~HT~edId~L~~~~L~~~~ 134 (153)
|+++|+.+++ .+..+.
T Consensus 371 --~~~~l~~~l~-~l~~~l 386 (389)
T 1o4s_A 371 --SIERLTEALD-RIEDFL 386 (389)
T ss_dssp --CHHHHHHHHH-HHHHHH
T ss_pred --CHHHHHHHHH-HHHHHH
Confidence 9999999888 666543
No 130
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=94.50 E-value=0.072 Score=45.27 Aligned_cols=86 Identities=8% Similarity=-0.120 Sum_probs=58.4
Q ss_pred chHHHHHHHHHHHHHHHHHHhCC-Cccc--CCCCCCeEEEEcCCchHHHhcc------ccccCCCCCCCCceEEEEeeCC
Q psy5049 46 GIRRISVLAHNTRYFRRKLNRLG-LIVY--GHRDSPVVPVLVFFFSKVGQTS------IGLGVEQTALNDGLSLYESSHL 116 (153)
Q Consensus 46 ~~~rr~~L~~ni~~fr~~L~~~G-~~~~--~~s~SPIiPV~~g~~~~~~~~a------~~i~~PtVP~g~~RlRI~lsA~ 116 (153)
.++.+++++++..++++.|.+++ +... ..+...++.|.+.++..+.++. ..+..|. ...+||+.+..
T Consensus 358 ~~~~~~~~~~~~~~l~~~L~~l~~~~~v~~vr~~G~~~~i~l~~~~~~~~~~~~l~~~Gv~v~~~----~~~lRi~p~~~ 433 (457)
T 3tfu_A 358 GQDWRTRITELAAGLTAGLDTARALPAVTDVRVCGAIGVIECDRPVDLAVATPAALDRGVWLRPF----RNLVYAMPPYI 433 (457)
T ss_dssp TSCHHHHHHHHHHHHHHHHGGGGGSTTEEEEEECSSCEEEEESSCCCHHHHHHHHHHTTEECCCB----TTEEEECCCTT
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhcCCCeeeeecCCeEEEEEECCcccHHHHHHHHHHCCeEEEec----CCEEEEECCCC
Confidence 45789999999999999998763 2111 1134678888776542222222 2222232 36899999999
Q ss_pred CCHHHHHHHHHHHHHHHHhc
Q psy5049 117 RSANLWNRPHSPSLMAVFRG 136 (153)
Q Consensus 117 HT~edId~L~~~~L~~~~~~ 136 (153)
+|+||++++++ +|+.+.+.
T Consensus 434 ~t~eei~~~l~-~L~~~l~~ 452 (457)
T 3tfu_A 434 CTPAEITQITS-AMVEVARL 452 (457)
T ss_dssp CCHHHHHHHHH-HHHHHHHH
T ss_pred CCHHHHHHHHH-HHHHHHHH
Confidence 99999999999 88766554
No 131
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=94.49 E-value=0.13 Score=42.24 Aligned_cols=84 Identities=8% Similarity=-0.014 Sum_probs=53.7
Q ss_pred hHHHHHHHHHHHHHHHHHHhCCCcccCCCCCCeEEEEcCCc---------------hHHHh-cc----ccc----cCCCC
Q psy5049 47 IRRISVLAHNTRYFRRKLNRLGLIVYGHRDSPVVPVLVFFF---------------SKVGQ-TS----IGL----GVEQT 102 (153)
Q Consensus 47 ~~rr~~L~~ni~~fr~~L~~~G~~~~~~s~SPIiPV~~g~~---------------~~~~~-~a----~~i----~~PtV 102 (153)
.+.+++++++..++.+.|.+.|+.+.....+.++.+-+.+. ..... +. +.+ .|...
T Consensus 315 ~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~~g~~f~~~ 394 (429)
T 1yiz_A 315 NSISGELMAKRDYMASFLAEVGMNPTVPQGGYFMVADWSSLDSKVDLTQETDARKDYRFTKWMTKSVGLQGIPPSAFYSE 394 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCEEEECSBSSEEEEECCSSCTTTTCCSSSSSCHHHHHHHHHHHHTSEECBCGGGGSCG
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCcccCCCcceEEEEEcccccccccccccccCCCHHHHHHHHHHhCCEEEeCchHhCCC
Confidence 56778888999999999998888764333355777766532 11221 11 111 22221
Q ss_pred C---CCCceEEEEeeCCCCHHHHHHHHHHHHHHH
Q psy5049 103 A---LNDGLSLYESSHLRSANLWNRPHSPSLMAV 133 (153)
Q Consensus 103 P---~g~~RlRI~lsA~HT~edId~L~~~~L~~~ 133 (153)
+ .+...+||++. +++++|+++++ .|+.+
T Consensus 395 ~~~~~~~~~iRis~~--~~~e~i~~~l~-~l~~~ 425 (429)
T 1yiz_A 395 PNKHLGEDFVRYCFF--KKDENLQKAAE-ILRKW 425 (429)
T ss_dssp GGGGGTTTEEEEECC--SCHHHHHHHHH-HHHHH
T ss_pred cccCCCCCeEEEEec--CCHHHHHHHHH-HHHHh
Confidence 1 13678999997 49999999888 66654
No 132
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=94.44 E-value=0.11 Score=43.79 Aligned_cols=82 Identities=7% Similarity=-0.036 Sum_probs=55.0
Q ss_pred chHHHHHHHHHHHHHHHHHHhC----CCcccCCCCCCeEEEEc--CCc-hHHHhcc--cc-----cc----------CCC
Q psy5049 46 GIRRISVLAHNTRYFRRKLNRL----GLIVYGHRDSPVVPVLV--FFF-SKVGQTS--IG-----LG----------VEQ 101 (153)
Q Consensus 46 ~~~rr~~L~~ni~~fr~~L~~~----G~~~~~~s~SPIiPV~~--g~~-~~~~~~a--~~-----i~----------~Pt 101 (153)
..++++++.++..++.+.|.+. |+.+.. ++ +++.+-+ .+. ....+.. .. +. ++.
T Consensus 348 ~~~~~~~~~~~~~~l~~~L~~~~~~~g~~v~~-~~-~~v~~~~~~~~~~~~l~~~L~~~gi~~~rv~~~~g~f~G~~~~~ 425 (456)
T 2z67_A 348 YLELVKNQKNSKKLLDELLNDLSKKTGGKFLD-VE-SPIASCISVNSDPVEIAAKLYNLRVTGPRGIKKTDHFGNCYLGT 425 (456)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSSCCBCC-CC-CSSEEEEECSSCHHHHHHHHHHTTEESCEEECTTCHHHHTCSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccccCCEecC-CC-CeEEEEEecccHHHHHHHHHHHcCCCcceEEeecCccccccccc
Confidence 4677899999999999999987 876643 44 7777766 332 2222211 11 11 111
Q ss_pred CCCCCceEEEEeeCCCCHHHHHHHHHHHHHH
Q psy5049 102 TALNDGLSLYESSHLRSANLWNRPHSPSLMA 132 (153)
Q Consensus 102 VP~g~~RlRI~lsA~HT~edId~L~~~~L~~ 132 (153)
.| .+-+|++.+-.+|+||||++++ +|+.
T Consensus 426 ~~--~~~vr~s~~~~~t~eeid~~l~-~L~~ 453 (456)
T 2z67_A 426 YT--HDYIVMNAAIGVRTEDIVNSVS-KLEK 453 (456)
T ss_dssp CS--CCEEEEECCTTCCHHHHHHHHH-HHHT
T ss_pred cC--cchhhhhhhcCCCHHHHHHHHH-HHHH
Confidence 12 3689999999999999999888 6654
No 133
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=94.39 E-value=0.089 Score=44.29 Aligned_cols=88 Identities=10% Similarity=0.029 Sum_probs=56.3
Q ss_pred chHHHHHHHHHHHHHHHHHHhC----CCcccCCCCCCeEEEEcCC-------chHHHhcc------ccccCCCCCCCCce
Q psy5049 46 GIRRISVLAHNTRYFRRKLNRL----GLIVYGHRDSPVVPVLVFF-------FSKVGQTS------IGLGVEQTALNDGL 108 (153)
Q Consensus 46 ~~~rr~~L~~ni~~fr~~L~~~----G~~~~~~s~SPIiPV~~g~-------~~~~~~~a------~~i~~PtVP~g~~R 108 (153)
.++.+++++++..++++.|.+. +......+...++.+.+.+ ...+..+. ..+..|.-+ ....
T Consensus 345 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~-~~~~ 423 (451)
T 3oks_A 345 SEGLVARAQQIEKIMKDRLGRLQAEDDRIGDVRGRGAMIAMELVKAGTTEPDADLTKALCAGAHAAGVIVLSCGT-YGNV 423 (451)
T ss_dssp HTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETTEEEEEEBSTTSCCBCHHHHHHHHHHHHHTTEECEEECT-TSCE
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEeeEEEEEEEecCccCCCCHHHHHHHHHHHHhCCcEEecCCC-CCCE
Confidence 3578899999999999999864 2111112335677776632 22222222 222233312 2378
Q ss_pred EEEEeeCCCCHHHHHHHHHHHHHHHHh
Q psy5049 109 SLYESSHLRSANLWNRPHSPSLMAVFR 135 (153)
Q Consensus 109 lRI~lsA~HT~edId~L~~~~L~~~~~ 135 (153)
+||+++..+|+|||+++++ .|+.+.+
T Consensus 424 iRi~~~~~~t~e~i~~~l~-~l~~~l~ 449 (451)
T 3oks_A 424 VRFLPPLSIGDDLLNEGLD-VLEEVLR 449 (451)
T ss_dssp EEECCCTTCCHHHHHHHHH-HHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHH-HHHHHHh
Confidence 9999999999999999998 7776543
No 134
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=94.37 E-value=0.13 Score=42.02 Aligned_cols=85 Identities=7% Similarity=0.015 Sum_probs=53.4
Q ss_pred hHHHHHHHHHHHHHHHHHHhCCCcccCCCCCCeEEEEcCC-----chHHHh-cc----ccc----cC-CCC--------C
Q psy5049 47 IRRISVLAHNTRYFRRKLNRLGLIVYGHRDSPVVPVLVFF-----FSKVGQ-TS----IGL----GV-EQT--------A 103 (153)
Q Consensus 47 ~~rr~~L~~ni~~fr~~L~~~G~~~~~~s~SPIiPV~~g~-----~~~~~~-~a----~~i----~~-PtV--------P 103 (153)
++.++++.++..++.+.|.+.|+.+.......++.+-+.+ .....+ +. +.+ .| +.. +
T Consensus 286 ~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~~~~~ 365 (411)
T 2o0r_A 286 AALRNSLRARRDRLAAGLTEIGFAVHDSYGTYFLCADPRPLGYDDSTEFCAALPEKVGVAAIPMSAFCDPAAGQASQQAD 365 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCEECCCCBSSEEEEECGGGTCCCHHHHHHHHHHHHSEECEEGGGGSCCC--------C
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCEecCCCeeEEEEEecCCCCCCCHHHHHHHHHHhCCEEEcChhhhCCCcccccccccc
Confidence 5678889999999999999888876432223366665543 222222 11 111 22 221 1
Q ss_pred CCCceEEEEeeCCCCHHHHHHHHHHHHHHHH
Q psy5049 104 LNDGLSLYESSHLRSANLWNRPHSPSLMAVF 134 (153)
Q Consensus 104 ~g~~RlRI~lsA~HT~edId~L~~~~L~~~~ 134 (153)
.+...+||++. +++|||+++++ .|+.+.
T Consensus 366 ~~~~~iRis~~--~~~e~i~~~~~-~l~~~~ 393 (411)
T 2o0r_A 366 VWNHLVRFTFC--KRDDTLDEAIR-RLSVLA 393 (411)
T ss_dssp CGGGCEEEECC--SCHHHHHHHHH-HHGGGG
T ss_pred CCCCeEEEEec--CCHHHHHHHHH-HHHHHH
Confidence 15678999986 49999999888 665543
No 135
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=94.36 E-value=0.084 Score=43.52 Aligned_cols=87 Identities=11% Similarity=-0.160 Sum_probs=55.0
Q ss_pred hHHHHHHHHHHHHHHHHHHhC----CCcccCCCCCCeEEEEcCCc--------hHHHhcc------ccccCCCCCC-CCc
Q psy5049 47 IRRISVLAHNTRYFRRKLNRL----GLIVYGHRDSPVVPVLVFFF--------SKVGQTS------IGLGVEQTAL-NDG 107 (153)
Q Consensus 47 ~~rr~~L~~ni~~fr~~L~~~----G~~~~~~s~SPIiPV~~g~~--------~~~~~~a------~~i~~PtVP~-g~~ 107 (153)
++..++++++..++++.|++. +......+...++.+.+.+. ....++. ..+..|.-+. +..
T Consensus 324 ~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~ 403 (433)
T 1zod_A 324 DGLVARANVMGDRLRRGLLDLMERFDCIGDVRGRGLLLGVEIVKDRRTKEPADGLGAKITRECMNLGLSMNIVQLPGMGG 403 (433)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETTEEEEEEEEETTTTEECTTHHHHHHHHHHHTTEECCEECCTTSCC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEEEEEEEEEecCccccCCChHHHHHHHHHHHHCCCeEeccCCCCCCC
Confidence 467899999999999999874 22111123456777765431 1122222 2223333222 247
Q ss_pred eEEEEeeCCCCHHHHHHHHHHHHHHHH
Q psy5049 108 LSLYESSHLRSANLWNRPHSPSLMAVF 134 (153)
Q Consensus 108 RlRI~lsA~HT~edId~L~~~~L~~~~ 134 (153)
.+||+++..+|++|++++++ .|+.+.
T Consensus 404 ~lRi~~~~~~t~~~i~~~l~-~l~~~l 429 (433)
T 1zod_A 404 VFRIAPPLTVSEDEIDLGLS-LLGQAI 429 (433)
T ss_dssp EEEECCCTTCCHHHHHHHHH-HHHHHH
T ss_pred EEEEECCcCCCHHHHHHHHH-HHHHHH
Confidence 89999999999999999998 776554
No 136
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=94.31 E-value=0.14 Score=42.56 Aligned_cols=86 Identities=9% Similarity=-0.022 Sum_probs=56.1
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCcccCCCCCCeEEEEcC------CchH------HHhc-c---ccccC---------C--
Q psy5049 48 RRISVLAHNTRYFRRKLNRLGLIVYGHRDSPVVPVLVF------FFSK------VGQT-S---IGLGV---------E-- 100 (153)
Q Consensus 48 ~rr~~L~~ni~~fr~~L~~~G~~~~~~s~SPIiPV~~g------~~~~------~~~~-a---~~i~~---------P-- 100 (153)
+..++..++..++++.|.+.|+.+. ...+.++.+-+. +... +..+ . +.+.+ |
T Consensus 325 ~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~~~~~~~~~~~~~~~~ 403 (467)
T 2oqx_A 325 DWLAYRIAQVQYLVDGLEEIGVVCQ-QAGGHAAFVDAGKLLPHIPADQFPAQALACELYKVAGIRAVEIGSFLLGRDPKT 403 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCEE-EECSSCEEEEHHHHSTTSCGGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTT
T ss_pred HHHHHHHHHHHHHHHHHHHCCCeee-cCCceEEEEechhhcccCCcccccHHHHHHHHHHhcCceecccccccccccccc
Confidence 4566778999999999998887654 334566666652 1111 2222 1 11111 1
Q ss_pred --CCCCCCceEEEEeeCC-CCHHHHHHHHHHHHHHHHh
Q psy5049 101 --QTALNDGLSLYESSHL-RSANLWNRPHSPSLMAVFR 135 (153)
Q Consensus 101 --tVP~g~~RlRI~lsA~-HT~edId~L~~~~L~~~~~ 135 (153)
.++.+...+|++++.. +|++||+++++ .|+.+.+
T Consensus 404 g~~~~~~~~~iRl~~~~~~~t~e~i~~~~~-~l~~~l~ 440 (467)
T 2oqx_A 404 GKQLPCPAELLRLTIPRATYTQTHMDFIIE-AFKHVKE 440 (467)
T ss_dssp CSBCCCSCCEEEECCCTTTSCHHHHHHHHH-HHHHHHH
T ss_pred cccccCccCeEEEEecCCCCCHHHHHHHHH-HHHHHHh
Confidence 2334467999999999 99999999998 7776554
No 137
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=94.31 E-value=0.12 Score=41.73 Aligned_cols=86 Identities=7% Similarity=0.033 Sum_probs=57.8
Q ss_pred cchHHHHHHHHHHHHHHHHHHhCCCcc--c--CCCCCCeEEEEcCCc-----hHHHhcc----ccccCCCCCCCCceEEE
Q psy5049 45 SGIRRISVLAHNTRYFRRKLNRLGLIV--Y--GHRDSPVVPVLVFFF-----SKVGQTS----IGLGVEQTALNDGLSLY 111 (153)
Q Consensus 45 ~~~~rr~~L~~ni~~fr~~L~~~G~~~--~--~~s~SPIiPV~~g~~-----~~~~~~a----~~i~~PtVP~g~~RlRI 111 (153)
..++.+++++++..++++.|++.+... . ..+...++.+.+.+. ....... ..+. | .+...+|+
T Consensus 300 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~-~---~~~~~iRi 375 (406)
T 4adb_A 300 NTPEMLNGVKQRHDWFVERLNTINHRYGLFSEVRGLGLLIGCVLNADYAGQAKQISQEAAKAGVMVL-I---AGGNVVRF 375 (406)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEETTEEEEEECTTTTTCHHHHHHHHHHTTEECE-E---SSTTEEEE
T ss_pred HhcCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEEEEEEEEEEeCCcHHHHHHHHHHHHHCCcEEe-e---cCCCeEEE
Confidence 347889999999999999998764211 0 012356777777652 2222222 2222 2 34789999
Q ss_pred EeeCCCCHHHHHHHHHHHHHHHHh
Q psy5049 112 ESSHLRSANLWNRPHSPSLMAVFR 135 (153)
Q Consensus 112 ~lsA~HT~edId~L~~~~L~~~~~ 135 (153)
+++..+|+||++++++ .|+.+.+
T Consensus 376 ~~~~~~~~e~i~~~~~-~l~~~l~ 398 (406)
T 4adb_A 376 APALNVSEEEVTTGLD-RFAAACE 398 (406)
T ss_dssp CCCTTCCHHHHHHHHH-HHHHHHH
T ss_pred ECCCCCCHHHHHHHHH-HHHHHHH
Confidence 9999999999999998 7765543
No 138
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=94.29 E-value=0.24 Score=39.66 Aligned_cols=83 Identities=18% Similarity=0.076 Sum_probs=54.0
Q ss_pred hHHHHHHHHHHHHHHHHHHhC-CCcccCCCCCCeEEEEcCCc-hHHHhcc----ccc----cCCCCCCCCceEEEEeeCC
Q psy5049 47 IRRISVLAHNTRYFRRKLNRL-GLIVYGHRDSPVVPVLVFFF-SKVGQTS----IGL----GVEQTALNDGLSLYESSHL 116 (153)
Q Consensus 47 ~~rr~~L~~ni~~fr~~L~~~-G~~~~~~s~SPIiPV~~g~~-~~~~~~a----~~i----~~PtVP~g~~RlRI~lsA~ 116 (153)
++.+++++++..++.+.|.+. |+.+. .+.++.+.+-+.++ ....+.. +.+ .|+ +.+...+||+++
T Consensus 267 ~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~g~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~~~--~~~~~~iRis~~-- 341 (364)
T 1lc5_A 267 QATWHWLREEGARFYQALCQLPLLTVY-PGRANYLLLRCEREDIDLQRRLLTQRILIRSCANYP--GLDSRYYRVAIR-- 341 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSTTEEEC-CCSSSEEEEEESCTTCCHHHHHHTTTEECEECTTST--TCCTTEEEEECC--
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCEEC-CCCCeEEEEECCCcHHHHHHHHHHCCcEEeeCcccC--CCCCCEEEEEeC--
Confidence 567778889999999999987 76653 35567777666532 1222221 111 232 234678999975
Q ss_pred CCHHHHHHHHHHHHHHHHhc
Q psy5049 117 RSANLWNRPHSPSLMAVFRG 136 (153)
Q Consensus 117 HT~edId~L~~~~L~~~~~~ 136 (153)
+++|++++++ +++.+.+.
T Consensus 342 -~~~~~~~l~~-~l~~~~~~ 359 (364)
T 1lc5_A 342 -SAAQNERLLA-ALRNVLTG 359 (364)
T ss_dssp -CHHHHHHHHH-HHHHHC--
T ss_pred -CHHHHHHHHH-HHHHHhhc
Confidence 6899999998 88776543
No 139
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=94.28 E-value=0.091 Score=42.93 Aligned_cols=87 Identities=3% Similarity=-0.137 Sum_probs=55.8
Q ss_pred hHHHHHHHHHHHHHHHHHHhCC--Cccc--CCCCCCeEEEEcCC--------chHHHhcc------ccccCCCCCCCCce
Q psy5049 47 IRRISVLAHNTRYFRRKLNRLG--LIVY--GHRDSPVVPVLVFF--------FSKVGQTS------IGLGVEQTALNDGL 108 (153)
Q Consensus 47 ~~rr~~L~~ni~~fr~~L~~~G--~~~~--~~s~SPIiPV~~g~--------~~~~~~~a------~~i~~PtVP~g~~R 108 (153)
.+..++++++..++++.|.+.+ +... ..+.+.++.+-+.. .....++. .....|.-. ....
T Consensus 318 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~-~~~~ 396 (426)
T 1sff_A 318 ENLLQKANDLGQKLKDGLLAIAEKHPEIGDVRGLGAMIAIELFEDGDHNKPDAKLTAEIVARARDKGLILLSCGP-YYNV 396 (426)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHTCTTEEEEEEETTEEEEEEBGGGCTTSBCHHHHHHHHHHHHHTTEECEEEST-TSCE
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEEEEEEEEEecCccccCCChHHHHHHHHHHHHCCcEEecCCC-CCCE
Confidence 4578899999999999998753 3211 11346777777732 11222222 222233211 2578
Q ss_pred EEEEeeCCCCHHHHHHHHHHHHHHHHh
Q psy5049 109 SLYESSHLRSANLWNRPHSPSLMAVFR 135 (153)
Q Consensus 109 lRI~lsA~HT~edId~L~~~~L~~~~~ 135 (153)
+||+++..+|++|++++++ +|+.+.+
T Consensus 397 iRi~~~~~~~~~~i~~~~~-~l~~~l~ 422 (426)
T 1sff_A 397 LRILVPLTIEDAQIRQGLE-IISQCFD 422 (426)
T ss_dssp EEECCCTTCCHHHHHHHHH-HHHHHHH
T ss_pred EEEECCccCCHHHHHHHHH-HHHHHHH
Confidence 9999999999999999998 7766543
No 140
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=94.19 E-value=0.12 Score=43.38 Aligned_cols=86 Identities=12% Similarity=-0.039 Sum_probs=54.9
Q ss_pred chHHHHHHHHHHHHHHHHHHhC-----CCcccC-CCCCCeEEEEcCCc----hHHHhcc----c-------cc--cCCCC
Q psy5049 46 GIRRISVLAHNTRYFRRKLNRL-----GLIVYG-HRDSPVVPVLVFFF----SKVGQTS----I-------GL--GVEQT 102 (153)
Q Consensus 46 ~~~rr~~L~~ni~~fr~~L~~~-----G~~~~~-~s~SPIiPV~~g~~----~~~~~~a----~-------~i--~~PtV 102 (153)
.+++++++.++..++.+.|.+. |+.+.. .++++.+.+-+... ..+.... . ++ .+|.+
T Consensus 300 ~~~~~~~~~~~~~~l~~~L~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GI~v~~~~i~~~~~~p~~ 379 (447)
T 3h7f_A 300 FADRQRRTLSGARIIADRLMAPDVAKAGVSVVSGGTDVHLVLVDLRDSPLDGQAAEDLLHEVGITVNRNAVPNDPRPPMV 379 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSHHHHHTTCEEGGGSCSSSEEEEECTTSSCCHHHHHHHHHHTTEECBC------------
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccCCCeEEecCCCCCCEEEEEcCCCCCCHHHHHHHHHHCCeEEecccCCCCCCCCCC
Confidence 3568899999999999999988 887632 24577777766432 2222222 1 22 34444
Q ss_pred CCCCceEEEEeeCC----CCHHHHHHHHHHHHHHHHh
Q psy5049 103 ALNDGLSLYESSHL----RSANLWNRPHSPSLMAVFR 135 (153)
Q Consensus 103 P~g~~RlRI~lsA~----HT~edId~L~~~~L~~~~~ 135 (153)
| ..+||+..+. .|++|++++++ +++.+..
T Consensus 380 ~---~~lRig~~~~~~~~~~~eei~~~~~-~l~~~l~ 412 (447)
T 3h7f_A 380 T---SGLRIGTPALATRGFGDTEFTEVAD-IIATALA 412 (447)
T ss_dssp ----CEEEEECHHHHHHTCCHHHHHHHHH-HHHHHHH
T ss_pred C---CceeccCHHHhhCCCCHHHHHHHHH-HHHHHHh
Confidence 4 5599987554 78999999999 7766543
No 141
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=94.17 E-value=0.3 Score=38.93 Aligned_cols=84 Identities=5% Similarity=-0.144 Sum_probs=52.3
Q ss_pred chHHHHHHHHHHHHHHHHHHhC--CCcccCCCCCCeEE-EEcCC----chHHHhcc----ccccCCC---CCCCCceEEE
Q psy5049 46 GIRRISVLAHNTRYFRRKLNRL--GLIVYGHRDSPVVP-VLVFF----FSKVGQTS----IGLGVEQ---TALNDGLSLY 111 (153)
Q Consensus 46 ~~~rr~~L~~ni~~fr~~L~~~--G~~~~~~s~SPIiP-V~~g~----~~~~~~~a----~~i~~Pt---VP~g~~RlRI 111 (153)
.++++++++++..++.+.|++. |+.+.. +....+. +-+.. ........ .....|. -+.+...+||
T Consensus 284 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi 362 (383)
T 3kax_A 284 LNEIRFYIEDNAKFACEYIKDHIPTLSVMK-PEGSFLLWIDCSALNLSQDERTKLLEEKGKIIVEPGEKYGLGGEEHIGI 362 (383)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCTTCEECC-CSBSSEEEEECGGGCCCHHHHHHHHHHTSCEECEESGGGCTTCTTEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCceEec-CCceEEEEEEccccCCCHHHHHHHHHhhCCEEeECchhhcCCCCCeEEE
Confidence 4667889999999999999985 776543 4444444 44432 22222211 1111121 1235789999
Q ss_pred EeeCCCCHHHHHHHHHHHHHHH
Q psy5049 112 ESSHLRSANLWNRPHSPSLMAV 133 (153)
Q Consensus 112 ~lsA~HT~edId~L~~~~L~~~ 133 (153)
+++ +++++|+++++ .|+.+
T Consensus 363 ~~~--~~~~~i~~~l~-~l~~~ 381 (383)
T 3kax_A 363 NIG--CPRSVLEEILN-RLRHT 381 (383)
T ss_dssp ECS--SCHHHHHHHHH-HHHHH
T ss_pred EEc--CCHHHHHHHHH-HHHHH
Confidence 988 48999999887 66554
No 142
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=94.15 E-value=0.27 Score=39.15 Aligned_cols=86 Identities=6% Similarity=-0.009 Sum_probs=53.2
Q ss_pred hHHHHHHHHHHHHHHHHHHhC--CCcccCCCCCCeEEEEcCCc---hH-HHhcc---ccccCCCC---CCCCceEEEEee
Q psy5049 47 IRRISVLAHNTRYFRRKLNRL--GLIVYGHRDSPVVPVLVFFF---SK-VGQTS---IGLGVEQT---ALNDGLSLYESS 114 (153)
Q Consensus 47 ~~rr~~L~~ni~~fr~~L~~~--G~~~~~~s~SPIiPV~~g~~---~~-~~~~a---~~i~~PtV---P~g~~RlRI~ls 114 (153)
.+++++++++..++.+.|++. |+.+.......++.+-+.+. .. +..+. .....|.- +.+...+||+++
T Consensus 277 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~Ris~~ 356 (377)
T 3fdb_A 277 NQEVAYLKNNHDFLLHEIPKRIPGAKITPMQATYLMWIDFRDTTIEGSPSEFFIEKAKVAMNDGAWFGEDGTGFCRLNFA 356 (377)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSTTCEECCCSBCSEEEEECTTSCCCSCHHHHHHHHHCEECEEGGGGCGGGTTEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCCceEecCCeeEEEEEECcccCCCHHHHHHHHHhCCEEecCChhccCCCCCEEEEEeC
Confidence 677889999999999999985 77664323233334544431 11 22211 11111111 125689999998
Q ss_pred CCCCHHHHHHHHHHHHHHHHh
Q psy5049 115 HLRSANLWNRPHSPSLMAVFR 135 (153)
Q Consensus 115 A~HT~edId~L~~~~L~~~~~ 135 (153)
. ++|+|++.++ .++.+.+
T Consensus 357 ~--~~e~i~~~l~-~l~~~l~ 374 (377)
T 3fdb_A 357 T--SREVLEEAID-RMAKAVS 374 (377)
T ss_dssp S--CHHHHHHHHH-HHHHHHT
T ss_pred C--CHHHHHHHHH-HHHHHHh
Confidence 5 8999999888 7765543
No 143
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=94.13 E-value=0.086 Score=43.62 Aligned_cols=81 Identities=10% Similarity=-0.132 Sum_probs=54.6
Q ss_pred HHHHHHHHHHHHHHHHHhCCCcccCCCCCCeEEEEcCCc-hHHH--hcc---ccccCCCCCCCCceEEEEeeCCCCHHHH
Q psy5049 49 RISVLAHNTRYFRRKLNRLGLIVYGHRDSPVVPVLVFFF-SKVG--QTS---IGLGVEQTALNDGLSLYESSHLRSANLW 122 (153)
Q Consensus 49 rr~~L~~ni~~fr~~L~~~G~~~~~~s~SPIiPV~~g~~-~~~~--~~a---~~i~~PtVP~g~~RlRI~lsA~HT~edI 122 (153)
.+++++++..+|++.|.+. +... .+...++.+-+... .... ... ..+..|. +...+||+++..+|+||+
T Consensus 330 ~~~~~~~~~~~l~~~L~~~-~~~~-~~~g~~~~i~~~~~~~~~~~~~~l~~~Gv~v~~~---~~~~lRis~~~~~t~e~i 404 (419)
T 2eo5_A 330 LLPHVNEIGKIFAEELQGL-ADDV-RGIGLAWGLEYNEKKVRDRIIGESFKRGLLLLPA---GRSAIRVIPPLVISEEEA 404 (419)
T ss_dssp HHHHHHHHHHHHHHHHTTS-SSEE-EEETTEEEEECSCHHHHHHHHHHHHHTTEECEEE---TTTEEEECCCTTCCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHh-hhhe-EeeeEEEEEEEecCccHHHHHHHHHHCCCEEecC---CCCEEEEECCCCCCHHHH
Confidence 7889999999999999876 3221 34567887776321 1122 111 1222232 357899999999999999
Q ss_pred HHHHHHHHHHHHh
Q psy5049 123 NRPHSPSLMAVFR 135 (153)
Q Consensus 123 d~L~~~~L~~~~~ 135 (153)
+++++ +|+.+.+
T Consensus 405 ~~~l~-~l~~~l~ 416 (419)
T 2eo5_A 405 KQGLD-ILKKVIK 416 (419)
T ss_dssp HHHHH-HHHHHHH
T ss_pred HHHHH-HHHHHHH
Confidence 99998 7776543
No 144
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=94.13 E-value=0.34 Score=38.70 Aligned_cols=84 Identities=8% Similarity=-0.055 Sum_probs=52.2
Q ss_pred chHHHHHHHHHHHHHHHHHHhC--CCcccCCCCCCeEE-EEcCC----chHHHhcc--c-cc-cCCC---CCCCCceEEE
Q psy5049 46 GIRRISVLAHNTRYFRRKLNRL--GLIVYGHRDSPVVP-VLVFF----FSKVGQTS--I-GL-GVEQ---TALNDGLSLY 111 (153)
Q Consensus 46 ~~~rr~~L~~ni~~fr~~L~~~--G~~~~~~s~SPIiP-V~~g~----~~~~~~~a--~-~i-~~Pt---VP~g~~RlRI 111 (153)
.++++++++++..++.+.|.+. |+.+.. +....+. +-+.. .....+.. . .| ..|. -+.+...+||
T Consensus 292 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi 370 (391)
T 4dq6_A 292 LESFLEYLESNIDFAIKYINENMPKLKVRK-PEGTYLLWVDFSALGLSDEELESILVQKGKVALNQGNSFGIGGSGYQRI 370 (391)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCTTSEECC-CSBSSEEEEECGGGCCCHHHHHHHHHHTTCEECEEGGGGCTTCTTEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCCEecC-CCccEEEEEEhhhcCCCHHHHHHHHHHhCCEEeeCchhhCCCCCCeEEE
Confidence 3667888999999999999874 776543 3344333 44432 22222211 1 22 2121 1235689999
Q ss_pred EeeCCCCHHHHHHHHHHHHHHH
Q psy5049 112 ESSHLRSANLWNRPHSPSLMAV 133 (153)
Q Consensus 112 ~lsA~HT~edId~L~~~~L~~~ 133 (153)
+++ +++|+|+++++ .|..+
T Consensus 371 s~~--~~~~~i~~~l~-~l~~~ 389 (391)
T 4dq6_A 371 NLA--CPRSMLEEALI-RIKNA 389 (391)
T ss_dssp ECC--SCHHHHHHHHH-HHHHH
T ss_pred EEc--CCHHHHHHHHH-HHHHH
Confidence 998 79999999888 66654
No 145
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=94.11 E-value=0.12 Score=43.49 Aligned_cols=88 Identities=7% Similarity=-0.026 Sum_probs=55.9
Q ss_pred chHHHHHHHHHHHHHHHHHHhC--CCcc--cCCCCCCeEEEEcCC-------chHHHhcc------ccccCCCCCCCCce
Q psy5049 46 GIRRISVLAHNTRYFRRKLNRL--GLIV--YGHRDSPVVPVLVFF-------FSKVGQTS------IGLGVEQTALNDGL 108 (153)
Q Consensus 46 ~~~rr~~L~~ni~~fr~~L~~~--G~~~--~~~s~SPIiPV~~g~-------~~~~~~~a------~~i~~PtVP~g~~R 108 (153)
.++..++++++..++++.|.+. .+.. ...+...++.+.+.+ ...+..+. -.+..|.-+ ....
T Consensus 343 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~-~~~~ 421 (453)
T 4ffc_A 343 ELDLPARARAIEASVTSRLSALAEEVDIIGEVRGRGAMLAIEIVKPGTLEPDAALTKSIAAEALSQGVLILTCGT-FGNV 421 (453)
T ss_dssp HTTHHHHHHHHHHHHHHHHHHHHHHCSSEEEEEEETTEEEEEEBCTTSCCBCHHHHHHHHHHHHHTTEECCEECT-TSCE
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeeceEEEEEEecCcccCCCHHHHHHHHHHHHhCCCEEecCCC-CCCE
Confidence 4578899999999999999764 1211 012335567776632 22232222 222333312 2378
Q ss_pred EEEEeeCCCCHHHHHHHHHHHHHHHHh
Q psy5049 109 SLYESSHLRSANLWNRPHSPSLMAVFR 135 (153)
Q Consensus 109 lRI~lsA~HT~edId~L~~~~L~~~~~ 135 (153)
+||+++..+|+|||+++++ .|+.+.+
T Consensus 422 iRi~~~~~~t~e~i~~~l~-~l~~~l~ 447 (453)
T 4ffc_A 422 IRLLPPLVIGDDLLDEGIT-ALSDIIR 447 (453)
T ss_dssp EEECCCTTCCHHHHHHHHH-HHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHH-HHHHHHH
Confidence 9999999999999999998 7766554
No 146
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=94.09 E-value=0.24 Score=39.26 Aligned_cols=77 Identities=8% Similarity=-0.098 Sum_probs=51.5
Q ss_pred chHHHHHHHHHHHHHHHHHHhCCCcccCCCCCCeEEEEcCC--chHHHhcc---ccccCCCCCCCCceEEEEeeCCCCHH
Q psy5049 46 GIRRISVLAHNTRYFRRKLNRLGLIVYGHRDSPVVPVLVFF--FSKVGQTS---IGLGVEQTALNDGLSLYESSHLRSAN 120 (153)
Q Consensus 46 ~~~rr~~L~~ni~~fr~~L~~~G~~~~~~s~SPIiPV~~g~--~~~~~~~a---~~i~~PtVP~g~~RlRI~lsA~HT~e 120 (153)
.++.+++++++..++.+.|.+.|+.+. .+.++++.+-+.+ ........ .....| +...+||+++ +++
T Consensus 251 ~~~~~~~~~~~~~~l~~~L~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~----~~~~iRis~~---~~~ 322 (335)
T 1uu1_A 251 FEERTKFIVEERERMKSALREMGYRIT-DSRGNFVFVFMEKEEKERLLEHLRTKNVAVRS----FREGVRITIG---KRE 322 (335)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCCBC-CCCSSEEEEECCTHHHHHHHHHHHHHTEEEEE----ETTEEEEECC---CHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCcEEc-CCCCeEEEEECCCCCHHHHHHHHHHCCEEEEE----CCCeEEEEeC---CHH
Confidence 356788899999999999998887654 3557777776654 12222221 222223 4578999985 468
Q ss_pred HHHHHHHHHHH
Q psy5049 121 LWNRPHSPSLM 131 (153)
Q Consensus 121 dId~L~~~~L~ 131 (153)
|++++++ +|+
T Consensus 323 ~i~~~~~-~l~ 332 (335)
T 1uu1_A 323 ENDMILR-ELE 332 (335)
T ss_dssp HHHHHHH-HHH
T ss_pred HHHHHHH-HHH
Confidence 8999887 664
No 147
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=94.05 E-value=0.12 Score=42.88 Aligned_cols=85 Identities=4% Similarity=-0.053 Sum_probs=56.8
Q ss_pred chHHHHHHHHHHHHHHHHHHhC--CCccc--CCCCCCeEEEEcCCc-----hHHHhcc---ccccCCCCCCCCceEEEEe
Q psy5049 46 GIRRISVLAHNTRYFRRKLNRL--GLIVY--GHRDSPVVPVLVFFF-----SKVGQTS---IGLGVEQTALNDGLSLYES 113 (153)
Q Consensus 46 ~~~rr~~L~~ni~~fr~~L~~~--G~~~~--~~s~SPIiPV~~g~~-----~~~~~~a---~~i~~PtVP~g~~RlRI~l 113 (153)
.++.+++++++..++++.|.+. ++... ..+...++.+.+.+. .+..+.. ..+..|. +...+||++
T Consensus 319 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~l~~~l~~~Gi~v~~~---~~~~iRl~~ 395 (420)
T 2pb2_A 319 TPEVLQGIHTKRQQFVQHLQAIDEQFDIFSDIRGMGLLIGAELKPKYKGRARDFLYAGAEAGVMVLNA---GADVMRFAP 395 (420)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEETTEEEEEECGGGTTCHHHHHHHHHHTTEECEES---STTEEEECC
T ss_pred hccHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecceEEEEEECCCchHHHHHHHHHHHHCCCEEEeC---CCCEEEEEC
Confidence 4678999999999999999875 23211 123467888777543 1222222 2222332 357899999
Q ss_pred eCCCCHHHHHHHHHHHHHHHH
Q psy5049 114 SHLRSANLWNRPHSPSLMAVF 134 (153)
Q Consensus 114 sA~HT~edId~L~~~~L~~~~ 134 (153)
+..+|+||++++++ .|+.+.
T Consensus 396 ~~~~t~eei~~~~~-~l~~~l 415 (420)
T 2pb2_A 396 SLVVEEADIHEGMQ-RFAQAV 415 (420)
T ss_dssp CTTCCHHHHHHHHH-HHHHHH
T ss_pred CCCCCHHHHHHHHH-HHHHHH
Confidence 99999999999998 776554
No 148
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=93.99 E-value=0.22 Score=40.62 Aligned_cols=80 Identities=4% Similarity=-0.151 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCcccCCCCCCeEEEE-cCCchHHHhcc---ccccCCCCCCCCceEEEEeeCCCCHHHHH
Q psy5049 48 RRISVLAHNTRYFRRKLNRLGLIVYGHRDSPVVPVL-VFFFSKVGQTS---IGLGVEQTALNDGLSLYESSHLRSANLWN 123 (153)
Q Consensus 48 ~rr~~L~~ni~~fr~~L~~~G~~~~~~s~SPIiPV~-~g~~~~~~~~a---~~i~~PtVP~g~~RlRI~lsA~HT~edId 123 (153)
+.+++++++..++.+.|.+.|+.+. .+++..+.++ +.+.....+.. .....| |...+||++++.++++.++
T Consensus 327 ~~~~~~~~~~~~l~~~l~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~~----g~~~iRis~~~~~~~~~l~ 401 (413)
T 3t18_A 327 DLRNMLKSRADVFVTAAKENKLTMI-PYFGGFFTFIPTDKAFDIVKDLEKENIFTIP----SAKGIRVAICGVGEEKIPK 401 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCB-CCCSSSCEEEECSCHHHHHHHHHHTTEECEE----CSSEEEECTTTSCGGGHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCcc-CCCceEEEEeCCCCHHHHHHHHHhCCEEEec----CCCceEEEEeeCCHHHHHH
Confidence 5678899999999999999998764 3444433322 23433333333 222333 3678999999777766666
Q ss_pred HHHHHHHHHH
Q psy5049 124 RPHSPSLMAV 133 (153)
Q Consensus 124 ~L~~~~L~~~ 133 (153)
.+.+ +++.+
T Consensus 402 ~l~~-~l~~~ 410 (413)
T 3t18_A 402 LVQR-LAFYT 410 (413)
T ss_dssp HHHH-HHHHH
T ss_pred HHHH-HHHHH
Confidence 6666 66554
No 149
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=93.95 E-value=0.092 Score=43.30 Aligned_cols=83 Identities=7% Similarity=-0.146 Sum_probs=54.3
Q ss_pred hHHHHHHHHHHHHHHHHHHhCC-Cccc--CCCCCCeEEEEcCC---chHHHhcc---ccccCCCCCCCCceEEEEeeCCC
Q psy5049 47 IRRISVLAHNTRYFRRKLNRLG-LIVY--GHRDSPVVPVLVFF---FSKVGQTS---IGLGVEQTALNDGLSLYESSHLR 117 (153)
Q Consensus 47 ~~rr~~L~~ni~~fr~~L~~~G-~~~~--~~s~SPIiPV~~g~---~~~~~~~a---~~i~~PtVP~g~~RlRI~lsA~H 117 (153)
++..++++++..++++.|++.+ +... ..+.+.++.+-+.+ ........ .....|. ...+||+++..+
T Consensus 330 ~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~l~~~Gi~v~~~----~~~iRis~~~~~ 405 (429)
T 1s0a_A 330 GDWQQQVADIEVQLREQLAPARDAEMVADVRVLGAIGVVETTHPVNMAALQKFFVEQGVWIRPF----GKLIYLMPPYII 405 (429)
T ss_dssp CHHHHHHHHHHHHHHHHHGGGGGCTTEEEEEEETTEEEEEESSCBCHHHHHHHHHHTTEECCCB----TTEEEECCCTTC
T ss_pred CCHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEeeEEEEEEECCcccHHHHHHHHHHCCCEEecc----CCEEEEECCCCC
Confidence 4678999999999999998752 1110 11334566676653 22222222 2222332 368999999999
Q ss_pred CHHHHHHHHHHHHHHHH
Q psy5049 118 SANLWNRPHSPSLMAVF 134 (153)
Q Consensus 118 T~edId~L~~~~L~~~~ 134 (153)
|+||++++++ +|+.+.
T Consensus 406 t~e~i~~~~~-~l~~~~ 421 (429)
T 1s0a_A 406 LPQQLQRLTA-AVNRAV 421 (429)
T ss_dssp CHHHHHHHHH-HHHHHT
T ss_pred CHHHHHHHHH-HHHHHH
Confidence 9999999998 777654
No 150
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=93.95 E-value=0.11 Score=43.64 Aligned_cols=87 Identities=11% Similarity=0.039 Sum_probs=55.1
Q ss_pred chHHHHHHHHHHHHHHHHHHhC--CCcc--cCCCCCCeEEEEcCCchH-----------HHhcc------ccccCCCCCC
Q psy5049 46 GIRRISVLAHNTRYFRRKLNRL--GLIV--YGHRDSPVVPVLVFFFSK-----------VGQTS------IGLGVEQTAL 104 (153)
Q Consensus 46 ~~~rr~~L~~ni~~fr~~L~~~--G~~~--~~~s~SPIiPV~~g~~~~-----------~~~~a------~~i~~PtVP~ 104 (153)
.++..++++++..++++.|.+. .+.. ...+...++.+.+.++.. +..+. ..+..|.-
T Consensus 347 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~-- 424 (460)
T 3gju_A 347 EMDLVTNAGETGAYFRAELAKAVGGHKNVGEVRGDGMLAAVEFVADKDDRVFFDASQKIGPQVATALAASGVIGRAMP-- 424 (460)
T ss_dssp HTTHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHTTEECEECS--
T ss_pred hccHHHHHHHHHHHHHHHHHHHHhcCCCeEEEeeeeEEEEEEEccCccccccccchHHHHHHHHHHHHHCCeEEecCC--
Confidence 4578899999999999999542 1111 012335566776654321 22221 22222321
Q ss_pred CCceEEEEeeCCCCHHHHHHHHHHHHHHHHh
Q psy5049 105 NDGLSLYESSHLRSANLWNRPHSPSLMAVFR 135 (153)
Q Consensus 105 g~~RlRI~lsA~HT~edId~L~~~~L~~~~~ 135 (153)
+...+||+++..+|+||++++++ +|+.+.+
T Consensus 425 ~~~~iRi~~~~~~t~e~i~~~l~-~l~~~l~ 454 (460)
T 3gju_A 425 QGDILGFAPPLCLTREQADIVVS-KTADAVK 454 (460)
T ss_dssp SSCEEEECCCTTCCHHHHHHHHH-HHHHHHH
T ss_pred CCCEEEEECCCCCCHHHHHHHHH-HHHHHHH
Confidence 35899999999999999999998 7766544
No 151
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=93.93 E-value=0.36 Score=38.28 Aligned_cols=83 Identities=14% Similarity=0.085 Sum_probs=55.2
Q ss_pred hHHHHHHHHHHHHHHHHHHhC-CCcccCCCCCCeEEEEcCC--chHHHhcc-----ccc----cCCCCCCCCceEEEEee
Q psy5049 47 IRRISVLAHNTRYFRRKLNRL-GLIVYGHRDSPVVPVLVFF--FSKVGQTS-----IGL----GVEQTALNDGLSLYESS 114 (153)
Q Consensus 47 ~~rr~~L~~ni~~fr~~L~~~-G~~~~~~s~SPIiPV~~g~--~~~~~~~a-----~~i----~~PtVP~g~~RlRI~ls 114 (153)
.++.+++.++..++.+.|.+. |+.+. .+.+..+.+.+.. .....+.. +.+ .|+ +.+...+||+++
T Consensus 247 ~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~gi~v~~g~~f~--~~~~~~iRis~~ 323 (350)
T 3fkd_A 247 TLPIRKWQRNTVDFITALNRLDGVEVH-PSGTTFFLLRLKKGTAAELKKYMLEEYNMLIRDASNFR--GLDESYVRITTQ 323 (350)
T ss_dssp CCCHHHHHHHHHHHHHHHHHSTTEEEC-CCSSSEEEEEESSSCHHHHHHHHHHTTCEECEECTTST--TCCTTEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCcEEC-CCCCcEEEEECCCCCHHHHHHHHHHHCCEEEEeCccCC--CCCCCEEEEEcC
Confidence 344455559999999999987 77663 4567777676664 22222211 111 222 345789999987
Q ss_pred CCCCHHHHHHHHHHHHHHHHhc
Q psy5049 115 HLRSANLWNRPHSPSLMAVFRG 136 (153)
Q Consensus 115 A~HT~edId~L~~~~L~~~~~~ 136 (153)
+++|++++++ +|+.+.+.
T Consensus 324 ---~~~~~~~l~~-al~~~~~~ 341 (350)
T 3fkd_A 324 ---RPAQNQLFIK-ALETFLEK 341 (350)
T ss_dssp ---CHHHHHHHHH-HHHHHHTC
T ss_pred ---CHHHHHHHHH-HHHHHHHH
Confidence 8999999999 88877754
No 152
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=93.87 E-value=0.37 Score=39.55 Aligned_cols=88 Identities=10% Similarity=-0.047 Sum_probs=57.7
Q ss_pred cchHHHHHHHHHHHHHHHHHHhCCC---------------cccC---CCCCCeEEEEcCCc-hHHHhcc----c------
Q psy5049 45 SGIRRISVLAHNTRYFRRKLNRLGL---------------IVYG---HRDSPVVPVLVFFF-SKVGQTS----I------ 95 (153)
Q Consensus 45 ~~~~rr~~L~~ni~~fr~~L~~~G~---------------~~~~---~s~SPIiPV~~g~~-~~~~~~a----~------ 95 (153)
..+++++++.+|..++.+.|.+.+. .+.+ .+..+++.+-+.+. +.+..+. .
T Consensus 261 ~~~~~~~~~~~~~~~l~~~L~~~~~v~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~i~~~~~s 340 (398)
T 1gc0_A 261 TLNLRMDRHCANAQVLAEFLARQPQVELIHYPGLASFPQYTLARQQMSQPGGMIAFELKGGIGAGRRFMNALQLFSRAVS 340 (398)
T ss_dssp THHHHHHHHHHHHHHHHHHHHTCTTEEEEEEC----------------CCTTEEEEEETTHHHHHHHHHHHCSSSEECSC
T ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCeeEEECCCCCCCcCHHHHHhhCCCCceEEEEEECCCHHHHHHHHHhCCCceeccC
Confidence 3467889999999999999987531 1110 13478999888643 3333332 1
Q ss_pred ------cccCCC------CCC--------CCceEEEEeeCCCCHHHHHHHHHHHHHHH
Q psy5049 96 ------GLGVEQ------TAL--------NDGLSLYESSHLRSANLWNRPHSPSLMAV 133 (153)
Q Consensus 96 ------~i~~Pt------VP~--------g~~RlRI~lsA~HT~edId~L~~~~L~~~ 133 (153)
.+.+|+ +|. ..+.+||++...+++++|+.+.+ +|+.+
T Consensus 341 ~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~g~~~~~~~i~~l~~-al~~~ 397 (398)
T 1gc0_A 341 LGDAESLAQHPASMTHSSYTPEERAHYGISEGLVRLSVGLEDIDDLLADVQQ-ALKAS 397 (398)
T ss_dssp CSCSSCEEECGGGTTTSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHH-HHHHH
T ss_pred CCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHH-HHHhc
Confidence 112343 121 25899999999999999999988 77653
No 153
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=93.65 E-value=0.19 Score=41.36 Aligned_cols=81 Identities=10% Similarity=-0.075 Sum_probs=53.1
Q ss_pred HHHHHHHHHHHHHHHHH----hCCCcccCCCCCCe-EEEEcC--CchHHHhcc----ccccCCCCCCCCceEEEEeeCCC
Q psy5049 49 RISVLAHNTRYFRRKLN----RLGLIVYGHRDSPV-VPVLVF--FFSKVGQTS----IGLGVEQTALNDGLSLYESSHLR 117 (153)
Q Consensus 49 rr~~L~~ni~~fr~~L~----~~G~~~~~~s~SPI-iPV~~g--~~~~~~~~a----~~i~~PtVP~g~~RlRI~lsA~H 117 (153)
.+++++++..++.+.|. +.|+.+. .+.++. +.+-+. +.....+.. .....|. +...+||+++. .
T Consensus 336 ~~~~~~~~~~~l~~~L~~~~~~~g~~~~-~~~~g~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g---~~~~iRis~~~-~ 410 (430)
T 2x5f_A 336 NIQTLKERYEVTKEVVYADQYHSHWQAY-DFNSGYFMAIKVHDVDPEALRKHLIDKYSIGVIAL---NATDIRIAFSC-V 410 (430)
T ss_dssp HHHHHHHHHHHHHHHHTCGGGTTTEEEC-CCCBSSEEEEEESSSCHHHHHHHHHHHHCEECEEC---SSSEEEEEGGG-S
T ss_pred HHHHHHHHHHHHHHHHHhhCCCCCceee-CCCceEEEEeCCCCCCHHHHHHHHHHhCCEEEecC---CCCeEEEEEec-C
Confidence 78888899999999998 6676653 344443 555554 333222221 2223343 46789999996 5
Q ss_pred CHHHHHHHHHHHHHHHHh
Q psy5049 118 SANLWNRPHSPSLMAVFR 135 (153)
Q Consensus 118 T~edId~L~~~~L~~~~~ 135 (153)
+++|++++++ .|+.+.+
T Consensus 411 ~~e~i~~~~~-~l~~~l~ 427 (430)
T 2x5f_A 411 EKDDIPHVFD-SIAKAID 427 (430)
T ss_dssp CGGGHHHHHH-HHHHHHH
T ss_pred CHHHHHHHHH-HHHHHHH
Confidence 9999999998 7766543
No 154
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=93.64 E-value=0.21 Score=40.04 Aligned_cols=87 Identities=11% Similarity=-0.062 Sum_probs=50.7
Q ss_pred hHHHHHHHHHHHHHHHHHHhC-CCcccCCCCCCeEEEEcCCc---hHH-Hhcc----ccccCCCCCCCCceEEEEeeCCC
Q psy5049 47 IRRISVLAHNTRYFRRKLNRL-GLIVYGHRDSPVVPVLVFFF---SKV-GQTS----IGLGVEQTALNDGLSLYESSHLR 117 (153)
Q Consensus 47 ~~rr~~L~~ni~~fr~~L~~~-G~~~~~~s~SPIiPV~~g~~---~~~-~~~a----~~i~~PtVP~g~~RlRI~lsA~H 117 (153)
.+.+++++++..++.+.|.+. |+.......+..+.+.+... ... ..+. +.+.+-........+|++++..
T Consensus 275 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~- 353 (375)
T 3op7_A 275 ERNRHILEENLAILDQWIEEEPLVSYIRPAVVSTSFVKIAVDMPMEDFCLQLLQEHGVLLVPGNRFERDGYVRLGFACE- 353 (375)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCTTEEECCCSSSSCEEEEECCSSCHHHHHHHHHHHHCEECEEGGGGTCTTEEEECCCSC-
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCceEecCCCeEEEeEEcCCCCCHHHHHHHHHHhCCEEEeChhhhCCCCeEEEEecCC-
Confidence 456777789999999999885 44432223334555555432 121 1111 2222211122257899998754
Q ss_pred CHHHHHHHHHHHHHHHHhc
Q psy5049 118 SANLWNRPHSPSLMAVFRG 136 (153)
Q Consensus 118 T~edId~L~~~~L~~~~~~ 136 (153)
.++|++.++ .+..+.+.
T Consensus 354 -~~~i~~~l~-~l~~~l~~ 370 (375)
T 3op7_A 354 -QETLIKGLE-KLSQFLRR 370 (375)
T ss_dssp -HHHHHHHHH-HHHHHHGG
T ss_pred -HHHHHHHHH-HHHHHHHH
Confidence 499999888 77665543
No 155
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=93.52 E-value=0.31 Score=40.10 Aligned_cols=87 Identities=15% Similarity=0.002 Sum_probs=53.5
Q ss_pred hHHHHHHHHHHHHHHHHHHhC-CCcccCCC---C--CCeEEEEcCC------chHHHhcc----cccc--CC-CCCC---
Q psy5049 47 IRRISVLAHNTRYFRRKLNRL-GLIVYGHR---D--SPVVPVLVFF------FSKVGQTS----IGLG--VE-QTAL--- 104 (153)
Q Consensus 47 ~~rr~~L~~ni~~fr~~L~~~-G~~~~~~s---~--SPIiPV~~g~------~~~~~~~a----~~i~--~P-tVP~--- 104 (153)
++.+++..++..++++.|.+. |+.+...+ . ..++++.+.+ .....+.. +.++ |+ .+..
T Consensus 260 ~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~ 339 (424)
T 2po3_A 260 PEVIDRNRRNHAAYREHLADLPGVLVADHDRHGLNNHQYVIVEIDEATTGIHRDLVMEVLKAEGVHTRAYFSPGCHELEP 339 (424)
T ss_dssp HHHHHHHHHHHHHHHHHTCSCTTEEECCGGGGSCCCCCCEEEEECHHHHSSCHHHHHHHHHHTTEECBCTTCSCGGGSTT
T ss_pred HHHHHHHHHHHHHHHHHhccCCCccccCCCCCCccccEEEEEEECCccchhhHHHHHHHHHHCCCceecccCCccccchh
Confidence 557778888889999999876 66543211 1 2677776652 23333322 2221 21 1110
Q ss_pred ----------CCce-----EEEEeeCCCCHHHHHHHHHHHHHHHH
Q psy5049 105 ----------NDGL-----SLYESSHLRSANLWNRPHSPSLMAVF 134 (153)
Q Consensus 105 ----------g~~R-----lRI~lsA~HT~edId~L~~~~L~~~~ 134 (153)
+..| +|+.++..+|++|++++++ +|+.+.
T Consensus 340 ~~~~g~~~~~~~~r~~~~~l~l~~~~~~t~e~i~~~~~-~L~~~~ 383 (424)
T 2po3_A 340 YRGQPHAPLPHTERLAARVLSLPTGTAIGDDDIRRVAD-LLRLCA 383 (424)
T ss_dssp TTTSCCCCCHHHHHHHTTEEEECCSTTCCHHHHHHHHH-HHHHHH
T ss_pred hhhcCCCCChhHHHHhcCEEEeeCCCCCCHHHHHHHHH-HHHHHH
Confidence 1123 8888889999999999999 776554
No 156
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=93.45 E-value=0.2 Score=41.53 Aligned_cols=84 Identities=7% Similarity=-0.077 Sum_probs=57.0
Q ss_pred hHHHHHHHHHHHHHHHHHHhCC-CcccC--CCCCCeEEEEcCCch--------HHHhcc---ccccCCCCCCCCceEEEE
Q psy5049 47 IRRISVLAHNTRYFRRKLNRLG-LIVYG--HRDSPVVPVLVFFFS--------KVGQTS---IGLGVEQTALNDGLSLYE 112 (153)
Q Consensus 47 ~~rr~~L~~ni~~fr~~L~~~G-~~~~~--~s~SPIiPV~~g~~~--------~~~~~a---~~i~~PtVP~g~~RlRI~ 112 (153)
++..++++++..++++.|.+.+ +...+ .+...++.+.+.... ...+.. ..+..|. | ..+||+
T Consensus 348 ~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~---g-~~iRis 423 (449)
T 3a8u_X 348 ENLVQSVAEVAPHFEKALHGIKGAKNVIDIRNFGLAGAIQIAPRDGDAIVRPFEAGMALWKAGFYVRFG---G-DTLQFG 423 (449)
T ss_dssp TTHHHHHHHHHHHHHHHHHTTTTSTTEEEEEEETTEEEEEECCBTTBSSHHHHHHHHHHHHHTEECEEE---T-TEEEEC
T ss_pred cCHHHHHHHHHHHHHHHHHHHhcCCCeEEEeeeEEEEEEEEecCcccccccHHHHHHHHHHCCcEEecC---C-CEEEEE
Confidence 4688999999999999998754 32211 134578888775431 122222 2223333 4 789999
Q ss_pred eeCCCCHHHHHHHHHHHHHHHHh
Q psy5049 113 SSHLRSANLWNRPHSPSLMAVFR 135 (153)
Q Consensus 113 lsA~HT~edId~L~~~~L~~~~~ 135 (153)
.+..+|++|++++++ +|+.+.+
T Consensus 424 ~~~~~t~~~i~~~l~-~l~~~l~ 445 (449)
T 3a8u_X 424 PTFNSKPQDLDRLFD-AVGEVLN 445 (449)
T ss_dssp CCTTCCHHHHHHHHH-HHHHHHH
T ss_pred CCCcCCHHHHHHHHH-HHHHHHH
Confidence 999999999999998 7776543
No 157
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=93.44 E-value=0.27 Score=39.58 Aligned_cols=84 Identities=15% Similarity=0.086 Sum_probs=49.7
Q ss_pred hHHHHHHHHHHHHHHHHHHhC-CCcccCCCCCCe-EEEEcC----CchHHHhcc----ccccCCCCCC-CCceEEEEeeC
Q psy5049 47 IRRISVLAHNTRYFRRKLNRL-GLIVYGHRDSPV-VPVLVF----FFSKVGQTS----IGLGVEQTAL-NDGLSLYESSH 115 (153)
Q Consensus 47 ~~rr~~L~~ni~~fr~~L~~~-G~~~~~~s~SPI-iPV~~g----~~~~~~~~a----~~i~~PtVP~-g~~RlRI~lsA 115 (153)
.+.+++++++..++.+.|++. |+.+.. +.+.. +-+-+. +.....+.. .....|...- ....+||++.
T Consensus 290 ~~~~~~~~~~~~~l~~~L~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~- 367 (388)
T 1j32_A 290 QEMLAAFAERRRYMLDALNAMPGLECPK-PDGAFYMFPSIAKTGRSSLDFCSELLDQHQVATVPGAAFGADDCIRLSYA- 367 (388)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCTTCBCCC-CCBTTEECCBCGGGTCCHHHHHHHHHHHHCEECEEGGGGTCTTBEEEECC-
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCCcccC-CCeeEEEEEecCCCCCCHHHHHHHHHHhCCEEEeChhhhCCCCcEEEEec-
Confidence 567888999999999999987 776543 33332 222222 222222211 1111221111 1467999986
Q ss_pred CCCHHHHHHHHHHHHHHHH
Q psy5049 116 LRSANLWNRPHSPSLMAVF 134 (153)
Q Consensus 116 ~HT~edId~L~~~~L~~~~ 134 (153)
+|+|+|+++++ .++.+.
T Consensus 368 -~~~~~i~~~~~-~l~~~l 384 (388)
T 1j32_A 368 -TDLDTIKRGME-RLEKFL 384 (388)
T ss_dssp -SCHHHHHHHHH-HHHHHH
T ss_pred -CCHHHHHHHHH-HHHHHH
Confidence 79999999888 666543
No 158
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=93.38 E-value=0.15 Score=41.07 Aligned_cols=87 Identities=6% Similarity=-0.092 Sum_probs=40.3
Q ss_pred hHHHHHHHHHHHHHHHHHHhCCCcccCCCC---CCeEEEEcCC--chHHHhc--c-ccccC-----------------CC
Q psy5049 47 IRRISVLAHNTRYFRRKLNRLGLIVYGHRD---SPVVPVLVFF--FSKVGQT--S-IGLGV-----------------EQ 101 (153)
Q Consensus 47 ~~rr~~L~~ni~~fr~~L~~~G~~~~~~s~---SPIiPV~~g~--~~~~~~~--a-~~i~~-----------------Pt 101 (153)
++.+++++++..++.+.|...|+.+..... ..++.+.+.+ .....+. . +.+++ ..
T Consensus 283 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~gi~v~~g~~~~~~~~~~~~~~~~~g 362 (400)
T 3vax_A 283 AQWQVAAQDLRSRLLAGLASTSFQVNGDQDHVVPHILNLSFEDVDAEAFLVTLKDLVAVATGSASTSASFTPSHVLRAMG 362 (400)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTTCEECSCTTSBCTTEEEEECTTCCHHHHHHHHHHHHHHTTTTEEEEEEECCHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHhhCCCCEEEeCCcccCCCCEEEEEeCCCCHHHHHHHHhcCcEEEecccccCCCCCccHHHHHcC
Confidence 678888999999999999855776543222 2477777653 2222111 1 11111 01
Q ss_pred CCC--CCceEEEEe-eCCCCHHHHHHHHHHHHHHHH
Q psy5049 102 TAL--NDGLSLYES-SHLRSANLWNRPHSPSLMAVF 134 (153)
Q Consensus 102 VP~--g~~RlRI~l-sA~HT~edId~L~~~~L~~~~ 134 (153)
++. ....+||++ +..+|+||++++++ +|+.+.
T Consensus 363 ~~~~~~~~~iRls~~~~~~t~e~i~~~~~-~l~~~~ 397 (400)
T 3vax_A 363 LPEEAASKSLRFSWTPGQATDLDVEELAR-GVAKLK 397 (400)
T ss_dssp CCHHHHTSEEEEEEEEC-------------------
T ss_pred CCccccCceEEEEccCCCCCHHHHHHHHH-HHHHHh
Confidence 111 147899999 99999999999988 776554
No 159
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=93.29 E-value=0.4 Score=39.00 Aligned_cols=85 Identities=8% Similarity=0.054 Sum_probs=51.5
Q ss_pred hHHHHHHHHHHHHHHHHHHhC-CCcccCCCCCCeEEEEcC--------CchHHHh-cc----ccccCCCCCCCCceEEEE
Q psy5049 47 IRRISVLAHNTRYFRRKLNRL-GLIVYGHRDSPVVPVLVF--------FFSKVGQ-TS----IGLGVEQTALNDGLSLYE 112 (153)
Q Consensus 47 ~~rr~~L~~ni~~fr~~L~~~-G~~~~~~s~SPIiPV~~g--------~~~~~~~-~a----~~i~~PtVP~g~~RlRI~ 112 (153)
++.+++++++..++.+.|.+. |+.+.....+..+.+-+. +...... +. +.+++-........+||+
T Consensus 312 ~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~iRis 391 (416)
T 1bw0_A 312 DQIVAKIEESAMYLYNHIGECIGLAPTMPRGAMYLMSRIDLEKYRDIKTDVEFFEKLLEEENVQVLPGTIFHAPGFTRLT 391 (416)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSTTEEECCCCBTTEEEEEECGGGBSSCCSHHHHHHHHHHHHCEECEEGGGGTCTTEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCcccCCCeeEEEEEeCCHHHcCCCCCHHHHHHHHHHHCCEEEecccccCCCCeEEEE
Confidence 567888999999999999987 765433333555555443 2222222 21 222211111124689999
Q ss_pred eeCCCCHHHHHHHHHHHHHHHH
Q psy5049 113 SSHLRSANLWNRPHSPSLMAVF 134 (153)
Q Consensus 113 lsA~HT~edId~L~~~~L~~~~ 134 (153)
++ +++++|+..++ .+..+.
T Consensus 392 ~~--~~~e~l~~~l~-~l~~~l 410 (416)
T 1bw0_A 392 TT--RPVEVYREAVE-RIKAFC 410 (416)
T ss_dssp CC--SCHHHHHHHHH-HHHHHH
T ss_pred ec--CCHHHHHHHHH-HHHHHH
Confidence 94 78999999888 666544
No 160
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=93.18 E-value=0.082 Score=44.85 Aligned_cols=49 Identities=10% Similarity=-0.018 Sum_probs=42.0
Q ss_pred cchHHHHHHHHHHHHHHHHHHhCCCcccCCCCCC-----eEEEEcCCchHHHhcc
Q psy5049 45 SGIRRISVLAHNTRYFRRKLNRLGLIVYGHRDSP-----VVPVLVFFFSKVGQTS 94 (153)
Q Consensus 45 ~~~~rr~~L~~ni~~fr~~L~~~G~~~~~~s~SP-----IiPV~~g~~~~~~~~a 94 (153)
..+.+++++++|+.++.+.|.+.|+.+. .+.++ |+||.+++.+++.+++
T Consensus 279 ~~~~r~~~~~~~a~~la~~L~~~g~~v~-p~~~~~~~~~i~~i~l~~~~~~~~~~ 332 (409)
T 3jzl_A 279 LAPHVTAQAIKGARFTAAMLAEFGVEAD-PVWDAPRTDLIQSVSFHNKEKMVAFA 332 (409)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCEEE-SCTTSCCSSSCCEEECSCHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCccc-CCCCCCCccEEEEEEeCCHHHHHHHH
Confidence 4578999999999999999999999874 34666 9999999988887775
No 161
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=93.09 E-value=0.17 Score=43.23 Aligned_cols=85 Identities=4% Similarity=-0.090 Sum_probs=54.8
Q ss_pred chHHHHHHH-HHHHHHHHHHHhCC-Cccc--CCCCCCeEEEEcCCch------------HHHhcc-----cc-ccCCCCC
Q psy5049 46 GIRRISVLA-HNTRYFRRKLNRLG-LIVY--GHRDSPVVPVLVFFFS------------KVGQTS-----IG-LGVEQTA 103 (153)
Q Consensus 46 ~~~rr~~L~-~ni~~fr~~L~~~G-~~~~--~~s~SPIiPV~~g~~~------------~~~~~a-----~~-i~~PtVP 103 (153)
.++.+++++ ++..++++.|+++. +... ..+...++.+.+..+. .+..+. .. +..|.
T Consensus 344 ~~~~~~~~~~~~~~~l~~~L~~l~~~~~v~~vr~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~-- 421 (472)
T 3hmu_A 344 EENILDHVRNVAAPYLKEKWEALTDHPLVGEAKIVGMMASIALTPNKASRAKFASEPGTIGYICRERCFANNLIMRHV-- 421 (472)
T ss_dssp HTTHHHHHHHTHHHHHHHHHHGGGGSTTEEEEEEETTEEEEEECSCGGGTCCBSSCTTHHHHHHHHHHHHTTBCCEEE--
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCceEEEEEecCccccccccchhHHHHHHHHHHHHHCCcEEEec--
Confidence 467899999 99999999997652 1110 0133456666665321 122222 22 22232
Q ss_pred CCCceEEEEeeCCCCHHHHHHHHHHHHHHHHh
Q psy5049 104 LNDGLSLYESSHLRSANLWNRPHSPSLMAVFR 135 (153)
Q Consensus 104 ~g~~RlRI~lsA~HT~edId~L~~~~L~~~~~ 135 (153)
| ..+||+.+..+|+||++++++ +|+.+.+
T Consensus 422 -g-~~iRi~p~~~~t~e~i~~~l~-~l~~~l~ 450 (472)
T 3hmu_A 422 -G-DRMIISPPLVITPAEIDEMFV-RIRKSLD 450 (472)
T ss_dssp -T-TEEEECCCTTCCHHHHHHHHH-HHHHHHH
T ss_pred -C-CEEEEECCCCCCHHHHHHHHH-HHHHHHH
Confidence 4 899999999999999999998 7765543
No 162
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=93.03 E-value=0.17 Score=40.99 Aligned_cols=83 Identities=11% Similarity=-0.072 Sum_probs=51.2
Q ss_pred chHHHHHHHHHHHHHHHHHHhCCCcccCCCCCCeEEEEcCCc---------------hHHHhcc----c----cccCCC-
Q psy5049 46 GIRRISVLAHNTRYFRRKLNRLGLIVYGHRDSPVVPVLVFFF---------------SKVGQTS----I----GLGVEQ- 101 (153)
Q Consensus 46 ~~~rr~~L~~ni~~fr~~L~~~G~~~~~~s~SPIiPV~~g~~---------------~~~~~~a----~----~i~~Pt- 101 (153)
..+.+++++++..++.+.|++.|+.+.....+..+.+-+... +.+..+. + +..|-.
T Consensus 299 ~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~ 378 (410)
T 3e2y_A 299 FNSLPKELEVKRDRMVRLLNSVGLKPIVPDGGYFIIADVSSLGADLSDMNSDEPYDYKFVKWMTKHKKLTAIPVSAFCDS 378 (410)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTCEEEBCSBSSEEEEECGGGCCCCTTCCSSCCHHHHHHHHHHHHHSEECEEGGGGSCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCeecCCCccEEEEEEchhhhcccccccccccCHHHHHHHHHHHcCEEEeCchhhCCC
Confidence 367788899999999999999998754333344444433210 1111111 1 111211
Q ss_pred --CCCCCceEEEEeeCCCCHHHHHHHHHHHHH
Q psy5049 102 --TALNDGLSLYESSHLRSANLWNRPHSPSLM 131 (153)
Q Consensus 102 --VP~g~~RlRI~lsA~HT~edId~L~~~~L~ 131 (153)
.|.+...+||+++. |+|+|+++++ .|+
T Consensus 379 ~~~~~~~~~iRis~~~--~~e~l~~~l~-~l~ 407 (410)
T 3e2y_A 379 KSKPHFEKLVRFCFIK--KDSTLDAAEE-IFR 407 (410)
T ss_dssp TTHHHHTTEEEEECCC--CHHHHHHHHH-HHH
T ss_pred CCCCCCCCEEEEEEcC--CHHHHHHHHH-HHH
Confidence 12357899999865 9999999877 554
No 163
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=92.97 E-value=0.64 Score=38.39 Aligned_cols=89 Identities=12% Similarity=-0.014 Sum_probs=58.7
Q ss_pred cchHHHHHHHHHHHHHHHHHHhCCC--c-c-cC---------------CC-C-CCeEEEEcCCc-hHHHhcc--------
Q psy5049 45 SGIRRISVLAHNTRYFRRKLNRLGL--I-V-YG---------------HR-D-SPVVPVLVFFF-SKVGQTS-------- 94 (153)
Q Consensus 45 ~~~~rr~~L~~ni~~fr~~L~~~G~--~-~-~~---------------~s-~-SPIiPV~~g~~-~~~~~~a-------- 94 (153)
..+++.+++.+|...+.+.|.+.+. . + .. .+ . .+|+.+.+.+. ..+..+.
T Consensus 252 ~~~~~~~~~~~~~~~l~~~L~~~~~~l~~v~~p~l~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~l~~l~~~~~ 331 (393)
T 1n8p_A 252 TLHLRVRQAALSANKIAEFLAADKENVVAVNYPGLKTHPNYDVVLKQHRDALGGGMISFRIKGGAEAASKFASSTRLFTL 331 (393)
T ss_dssp THHHHHHHHHHHHHHHHHHHTSCTTTEEEEECTTSTTSTTHHHHHHHSGGGCCCSEEEEEESSCHHHHHHHHHHCSSSEE
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCCceEEECCCCCCCccHHHHHhhCCCCCCccEEEEEeCCcHHHHHHHHhhCCcceE
Confidence 3466788899999999999987642 0 1 00 01 3 67999988643 3333322
Q ss_pred --------ccccCCCCCC------------C--CceEEEEeeCCCCHHHHHHHHHHHHHHHH
Q psy5049 95 --------IGLGVEQTAL------------N--DGLSLYESSHLRSANLWNRPHSPSLMAVF 134 (153)
Q Consensus 95 --------~~i~~PtVP~------------g--~~RlRI~lsA~HT~edId~L~~~~L~~~~ 134 (153)
..+..|+.|. | .+.+|++++..+++++|+.+.+ +|+.+.
T Consensus 332 ~~s~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~iRlS~g~~~~~~~i~~l~~-al~~~~ 392 (393)
T 1n8p_A 332 AESLGGIESLLEVPAVMTHGGIPKEAREASGVFDDLVRISVGIEDTDDLLEDIKQ-ALKQAT 392 (393)
T ss_dssp CSCCCCSSCEEECTTTTTSCSSCTTTTTTTSCCTTEEEEECCSSCHHHHHHHHHH-HHHHHH
T ss_pred CCCCCCCcceeeccccccccccCHHHHHhcCCCCCeEEEEEccCCHHHHHHHHHH-HHHHhh
Confidence 1113343332 2 5799999999999999999998 887653
No 164
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=92.93 E-value=0.12 Score=42.28 Aligned_cols=78 Identities=10% Similarity=-0.091 Sum_probs=49.1
Q ss_pred chHHHHHHHHHHHHHHHHHHhCC----CcccCCCCCCeEEEEcCCch-HHHhcc---ccccCCCCCCCCceEEEEeeCCC
Q psy5049 46 GIRRISVLAHNTRYFRRKLNRLG----LIVYGHRDSPVVPVLVFFFS-KVGQTS---IGLGVEQTALNDGLSLYESSHLR 117 (153)
Q Consensus 46 ~~~rr~~L~~ni~~fr~~L~~~G----~~~~~~s~SPIiPV~~g~~~-~~~~~a---~~i~~PtVP~g~~RlRI~lsA~H 117 (153)
..+.+++++++..++.+.|++.| +.+. .+++.++.+ ++-+. .+..+. .....|. .||+++ .+
T Consensus 323 ~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~-~~~~~~~~~-~~~~~~~~~~ll~~~gv~v~p~-------~Ri~~~-~~ 392 (409)
T 4eu1_A 323 LKQMSSRIAEVRKRLVSELKACGSVHDWSHI-ERQVGMMAY-TGLTREQVELLRSEYHIYMTLN-------GRAAVS-GL 392 (409)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCSCCHHH-HHSCSSEEE-CCCCHHHHHHHHHHHCEECCTT-------CEEEGG-GC
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCccee-cCCceEEEE-eCCCHHHHHHHHHcCCEEEcCC-------CEEEEE-ec
Confidence 35688899999999999999987 4432 234455444 33332 322222 2223342 377774 57
Q ss_pred CHHHHHHHHHHHHHHHH
Q psy5049 118 SANLWNRPHSPSLMAVF 134 (153)
Q Consensus 118 T~edId~L~~~~L~~~~ 134 (153)
|++||+++++ +++.+.
T Consensus 393 ~~~~i~~~~~-~l~~~l 408 (409)
T 4eu1_A 393 NSTNVEYVSQ-AIHNVT 408 (409)
T ss_dssp CTTTHHHHHH-HHHHHH
T ss_pred CHhhHHHHHH-HHHHHh
Confidence 7888999998 776553
No 165
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=92.84 E-value=0.34 Score=39.59 Aligned_cols=88 Identities=8% Similarity=-0.032 Sum_probs=54.4
Q ss_pred hHHHHHHHHHHHHHHHHHHhC-CCccc--CC----CCCC-eEEEEcCC----chHHHhcc------ccc-cCC-------
Q psy5049 47 IRRISVLAHNTRYFRRKLNRL-GLIVY--GH----RDSP-VVPVLVFF----FSKVGQTS------IGL-GVE------- 100 (153)
Q Consensus 47 ~~rr~~L~~ni~~fr~~L~~~-G~~~~--~~----s~SP-IiPV~~g~----~~~~~~~a------~~i-~~P------- 100 (153)
++.++++.++..++.+.|.+. |+.+. +. ..+| ++.+.+.+ .....+.. ..+ ..|
T Consensus 305 ~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~G~~~~~~~~~~~~ 384 (432)
T 3a9z_A 305 ETYEAHMRDIRDYLEERLEAEFGKRIHLNSRFPGVERLPNTCNFSIQGSQLRGYMVLAQCQTLLASVGASCHSDHEDRPS 384 (432)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHGGGEEESSCCTTCCBCTTEEEEEECSTTCCHHHHHHHCSSEECBSSCGGGGGGTTSCC
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCcEEEeCCCCcccCCCCEEEEEeCCCCCcHHHHHHHhcCeEEeccccccCCCCCCcc
Confidence 567888889999999999874 65331 11 1234 66666653 22222211 111 111
Q ss_pred ------CCC--CCCceEEEEeeCCCCHHHHHHHHHHHHHHHHh
Q psy5049 101 ------QTA--LNDGLSLYESSHLRSANLWNRPHSPSLMAVFR 135 (153)
Q Consensus 101 ------tVP--~g~~RlRI~lsA~HT~edId~L~~~~L~~~~~ 135 (153)
.++ .+...+||+++..+|+||++++++ +|+.+.+
T Consensus 385 ~~l~~~g~~~~~~~~~iRis~~~~~t~eei~~~~~-~l~~~~~ 426 (432)
T 3a9z_A 385 PVLLSCGIPVDVARNAVRLSVGRSTTRAEVDLIVQ-DLKQAVN 426 (432)
T ss_dssp HHHHHTTCCHHHHTTEEEEECCTTCCHHHHHHHHH-HHHHHHH
T ss_pred HHHHhcCCCccccCceEEEEcCCCCCHHHHHHHHH-HHHHHHH
Confidence 111 124689999999999999999999 8876543
No 166
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=92.83 E-value=0.34 Score=41.25 Aligned_cols=86 Identities=9% Similarity=0.017 Sum_probs=55.7
Q ss_pred chHHHHHHHHHHHHHHHHHHhC-CCcccCCCCCCeEEEEcCC--chHHHhcc--ccccCCCCCCCCceEEEEeeCCCC-H
Q psy5049 46 GIRRISVLAHNTRYFRRKLNRL-GLIVYGHRDSPVVPVLVFF--FSKVGQTS--IGLGVEQTALNDGLSLYESSHLRS-A 119 (153)
Q Consensus 46 ~~~rr~~L~~ni~~fr~~L~~~-G~~~~~~s~SPIiPV~~g~--~~~~~~~a--~~i~~PtVP~g~~RlRI~lsA~HT-~ 119 (153)
..++++++.++..++++.|.+. |+.+.. +...++.+.... .....+.. ..|..+... ....+|++++..++ +
T Consensus 375 ~~~~~~~~~~~~~~l~~~L~~~~g~~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~Gi~v~g~~-~~~~~Ri~~~~~~~~~ 452 (514)
T 3mad_A 375 YLDATRRILQAADRLKAGVRAIPSLKILG-DPLWVIAVASDELNIYQVMEEMAGRGWRLNGLH-RPPAFHVALTLRHTEP 452 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSTTCEESS-CCSSEEEEECSSSCHHHHHHHHHTTTCBCEEET-TTTEEEEECCGGGGST
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCCeEEeC-CCeEEEEEeCCCCCHHHHHHHHHhcCCEeccCC-CCCeEEEEEecCCCCH
Confidence 3678899999999999999986 776643 445676665532 12222222 222223322 13579999997665 5
Q ss_pred HHHHHHHHHHHHHHH
Q psy5049 120 NLWNRPHSPSLMAVF 134 (153)
Q Consensus 120 edId~L~~~~L~~~~ 134 (153)
||++++++ .|+.+.
T Consensus 453 e~i~~~l~-~L~~~l 466 (514)
T 3mad_A 453 GVVDRFLA-DLQDAV 466 (514)
T ss_dssp THHHHHHH-HHHHHH
T ss_pred HHHHHHHH-HHHHHH
Confidence 99999998 776544
No 167
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=92.80 E-value=0.32 Score=39.58 Aligned_cols=85 Identities=9% Similarity=0.010 Sum_probs=51.5
Q ss_pred hHHHHHHHHHHHHHHHHHHhC-CCcccCCCCCCeE-EEEcC-----CchHHHh-cc---ccccCCCC---CCCCceEEEE
Q psy5049 47 IRRISVLAHNTRYFRRKLNRL-GLIVYGHRDSPVV-PVLVF-----FFSKVGQ-TS---IGLGVEQT---ALNDGLSLYE 112 (153)
Q Consensus 47 ~~rr~~L~~ni~~fr~~L~~~-G~~~~~~s~SPIi-PV~~g-----~~~~~~~-~a---~~i~~PtV---P~g~~RlRI~ 112 (153)
.+.+++++++..++.+.|.+. |+.+.. +++..+ -+.+. +...... +. .....|.. +.+...+||+
T Consensus 303 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~lRis 381 (406)
T 1xi9_A 303 KEYMKKLKERRDYIYKRLNEIPGISTTK-PQGAFYIFPKIEVGPWKNDKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAV 381 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSTTEECCC-CCBSSEECCEECSCSCSSHHHHHHHHHHHHCEECEEGGGGCGGGTTBEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCeeec-CCeeEEEEEecCccCCCCHHHHHHHHHHhCCEEEeCchhcCCCCCCEEEEE
Confidence 567888999999999999987 665432 333332 22232 2222222 11 11111211 1346789999
Q ss_pred eeCCCCHHHHHHHHHHHHHHHHh
Q psy5049 113 SSHLRSANLWNRPHSPSLMAVFR 135 (153)
Q Consensus 113 lsA~HT~edId~L~~~~L~~~~~ 135 (153)
++ +++++|+.+++ .+..+.+
T Consensus 382 ~~--~~~~~i~~~~~-~l~~~l~ 401 (406)
T 1xi9_A 382 FL--PPIEILEEAMD-RFEKFMK 401 (406)
T ss_dssp CC--SCHHHHHHHHH-HHHHHHH
T ss_pred ec--CCHHHHHHHHH-HHHHHHH
Confidence 97 99999999988 7765543
No 168
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=92.76 E-value=0.18 Score=40.05 Aligned_cols=78 Identities=12% Similarity=0.063 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHHHHHHHHhC-CCcc-cCCCCCCeEEEEcCCc-----hHHHhcc----ccc---cCCCCCCCCceEEEEe
Q psy5049 48 RRISVLAHNTRYFRRKLNRL-GLIV-YGHRDSPVVPVLVFFF-----SKVGQTS----IGL---GVEQTALNDGLSLYES 113 (153)
Q Consensus 48 ~rr~~L~~ni~~fr~~L~~~-G~~~-~~~s~SPIiPV~~g~~-----~~~~~~a----~~i---~~PtVP~g~~RlRI~l 113 (153)
++.++..++..++.+.|.+. |+.+ ...+.+.++.+-+.+. ....+.. +.+ .++. | |...+|+++
T Consensus 256 ~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~g~~~~-~-~~~~~r~~i 333 (357)
T 3lws_A 256 DRMGQYYEQAKQLAEQFNALPGVHTTPEVPVSNMFHLHFDGQAADISPKLEQVQEETGLGFVGYLVDK-D-GYCSTEISV 333 (357)
T ss_dssp TCHHHHHHHHHHHHHHHHTSTTEEEESSSCSSSEEEEEEESCHHHHHHHHHHHHHHHCEESCSCCEEC-S-SEEEEEEEB
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCeeccCCCcceEEEEEecCChHHHHHHHHHHHHhcCeEEecccccC-C-CceEEEEEe
Confidence 44555688899999999987 7765 2346678888777653 1222222 222 2222 4 678999999
Q ss_pred eCCC---CHHHHHHHHH
Q psy5049 114 SHLR---SANLWNRPHS 127 (153)
Q Consensus 114 sA~H---T~edId~L~~ 127 (153)
.+.+ ++++++..++
T Consensus 334 ~~~~~~~~~~~l~~al~ 350 (357)
T 3lws_A 334 GDAYGELDQQTRDAGFA 350 (357)
T ss_dssp CTTGGGSCHHHHHHHHH
T ss_pred cchhhhcCHHHHHHHHH
Confidence 9775 6667766555
No 169
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=92.74 E-value=0.3 Score=40.17 Aligned_cols=80 Identities=11% Similarity=-0.125 Sum_probs=51.5
Q ss_pred hHHHHHHHHHHHHHHHHHHhC----CCcccCCCCCCeEEEEcCCc-------------hHHHhcc------ccccCCCCC
Q psy5049 47 IRRISVLAHNTRYFRRKLNRL----GLIVYGHRDSPVVPVLVFFF-------------SKVGQTS------IGLGVEQTA 103 (153)
Q Consensus 47 ~~rr~~L~~ni~~fr~~L~~~----G~~~~~~s~SPIiPV~~g~~-------------~~~~~~a------~~i~~PtVP 103 (153)
++.+++++++..++++.|++. |+.....+...++.+.+.+. ....++. ..+..|.
T Consensus 320 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~-- 397 (424)
T 2e7u_A 320 PGYYAYLEDLGARLEAGLKEVLKEKGLPHTVNRVGSMITVFFTEGPVVTFQDARRTDTELFKRFFHGLLDRGIYWPPS-- 397 (424)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEEEEESSSSCCCSHHHHTTSCHHHHHHHHHHHHTTTEECCSS--
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeeceEEEEEEeCCCCcchhhhcccCHHHHHHHHHHHHHCCeEEecc--
Confidence 678999999999999999875 65321124467888887641 1122222 2223332
Q ss_pred CCCceEEEEeeCCCCHHHHHHHHHHHHHH
Q psy5049 104 LNDGLSLYESSHLRSANLWNRPHSPSLMA 132 (153)
Q Consensus 104 ~g~~RlRI~lsA~HT~edId~L~~~~L~~ 132 (153)
+..+ +.++..||++|++++++ +|+.
T Consensus 398 -~~~~--~~~~~~~t~~~i~~~l~-~l~~ 422 (424)
T 2e7u_A 398 -NFEA--AFLSVAHREEDVEKTLE-ALRK 422 (424)
T ss_dssp -SSSC--EECCTTCCHHHHHHHHH-HHHH
T ss_pred -CCCc--eEeeccCCHHHHHHHHH-HHHH
Confidence 2234 55678999999999888 6654
No 170
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=92.71 E-value=0.24 Score=42.21 Aligned_cols=84 Identities=12% Similarity=-0.037 Sum_probs=54.9
Q ss_pred chHHHHHHHHHHHHHHHHHHhCC-Cccc--CCCCCCeEEEEcCCch-----------HHHhcc------ccccCCCCCCC
Q psy5049 46 GIRRISVLAHNTRYFRRKLNRLG-LIVY--GHRDSPVVPVLVFFFS-----------KVGQTS------IGLGVEQTALN 105 (153)
Q Consensus 46 ~~~rr~~L~~ni~~fr~~L~~~G-~~~~--~~s~SPIiPV~~g~~~-----------~~~~~a------~~i~~PtVP~g 105 (153)
.++.+++++++..++++.|+.++ +... ..+...++.|.+.++. .+..+. ..+..| .|
T Consensus 348 ~~~~~~~~~~~~~~l~~~L~~l~~~~~v~~v~~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~---~g 424 (476)
T 3i5t_A 348 REGIVDQAREMADYFAAALASLRDLPGVAETRSVGLVGCVQCLLDPTRADGTAEDKAFTLKIDERCFELGLIVRP---LG 424 (476)
T ss_dssp HTTHHHHHHHHHHHHHHHHHTTTTSTTEEEEEEETTEEEEEECCC-----CCHHHHHHHHHHHHHHHHTTEECEE---ET
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCceeEEEEecCccccccccchhHHHHHHHHHHHHCCCEEEe---cC
Confidence 46789999999999999999653 1110 0123456666665431 122222 222223 34
Q ss_pred CceEEEEeeCCCCHHHHHHHHHHHHHHHH
Q psy5049 106 DGLSLYESSHLRSANLWNRPHSPSLMAVF 134 (153)
Q Consensus 106 ~~RlRI~lsA~HT~edId~L~~~~L~~~~ 134 (153)
..+||+.+..+|++||+++++ +|+.+.
T Consensus 425 -~~iRi~p~l~~t~e~i~~~l~-~l~~~l 451 (476)
T 3i5t_A 425 -DLCVISPPLIISRAQIDEMVA-IMRQAI 451 (476)
T ss_dssp -TEEEECCCTTCCHHHHHHHHH-HHHHHH
T ss_pred -CEEEEECCCCCCHHHHHHHHH-HHHHHH
Confidence 899999999999999999998 776544
No 171
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=92.67 E-value=0.29 Score=40.07 Aligned_cols=83 Identities=10% Similarity=-0.058 Sum_probs=51.9
Q ss_pred hHHHHHHHHHHHHHHHHHHhCCCcccCCCCCCe-EEEEcCCc---hHHHhc-c---ccccCCC---CCCCCceEEEEeeC
Q psy5049 47 IRRISVLAHNTRYFRRKLNRLGLIVYGHRDSPV-VPVLVFFF---SKVGQT-S---IGLGVEQ---TALNDGLSLYESSH 115 (153)
Q Consensus 47 ~~rr~~L~~ni~~fr~~L~~~G~~~~~~s~SPI-iPV~~g~~---~~~~~~-a---~~i~~Pt---VP~g~~RlRI~lsA 115 (153)
++.+++++++..++.+.|.+.|+.+.. +++++ +.+-+.+. ....+. . .....|. -+.+...+||+++.
T Consensus 306 ~~~~~~~~~~~~~l~~~L~~~g~~~~~-~~~g~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~~ 384 (404)
T 2o1b_A 306 EEQSNVFKTRRDRFEAMLAKADLPFVH-AKGGIYVWLETPPGYDSEQFEQFLVQEKSILVAPGKPFGENGNRYVRISLAL 384 (404)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCEEC-CCBSSEEEEECCTTCCHHHHHHHHHHHHCEECEESGGGCGGGTTEEEEECCS
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCeecC-CCcceEEEEeCCCCCCHHHHHHHHHHHCCEEEeCchhhCcCCCCeEEEEEcC
Confidence 567788899999999999988887643 44454 55555432 222221 1 1111111 12246789999986
Q ss_pred CCCHHHHHHHHHHHHHHH
Q psy5049 116 LRSANLWNRPHSPSLMAV 133 (153)
Q Consensus 116 ~HT~edId~L~~~~L~~~ 133 (153)
++++|+++++ .++.+
T Consensus 385 --~~e~l~~~l~-~l~~~ 399 (404)
T 2o1b_A 385 --DDQKLDEAAI-RLTEL 399 (404)
T ss_dssp --CTTHHHHHHH-HHHGG
T ss_pred --CHHHHHHHHH-HHHHH
Confidence 7889999777 66543
No 172
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=92.65 E-value=0.87 Score=36.87 Aligned_cols=88 Identities=10% Similarity=-0.030 Sum_probs=57.3
Q ss_pred chHHHHHHHHHHHHHHHHHHhCCC------cccC------------CCCCCeEEEEcCCc-hHHHhcc----cccc----
Q psy5049 46 GIRRISVLAHNTRYFRRKLNRLGL------IVYG------------HRDSPVVPVLVFFF-SKVGQTS----IGLG---- 98 (153)
Q Consensus 46 ~~~rr~~L~~ni~~fr~~L~~~G~------~~~~------------~s~SPIiPV~~g~~-~~~~~~a----~~i~---- 98 (153)
.+++++++.+|..++.+.|.+.+. ..+. .+.++++.+.+.+. +.+..+. ..++
T Consensus 248 ~~~~~~~~~~~~~~l~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~ 327 (386)
T 1cs1_A 248 LVPRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDGDEQTLRRFLGGLSLFTLAESL 327 (386)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESSCHHHHHHHHHTCSSSEEBSCC
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCccHHHHHHhcCCCceEEEEEECCCHHHHHHHHHhCCcceEcccC
Confidence 356788899999999999987532 1000 12378888887643 3333322 2111
Q ss_pred --------CCCC------C--------CCCceEEEEeeCCCCHHHHHHHHHHHHHHHH
Q psy5049 99 --------VEQT------A--------LNDGLSLYESSHLRSANLWNRPHSPSLMAVF 134 (153)
Q Consensus 99 --------~PtV------P--------~g~~RlRI~lsA~HT~edId~L~~~~L~~~~ 134 (153)
+|+. | .+...+||++...+++++|+.+.+ +++.+.
T Consensus 328 g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~~~~~~~~i~~l~~-al~~~~ 384 (386)
T 1cs1_A 328 GGVESLISHAATMTHAGMAPEARAAAGISETLLRISTGIEDGEDLIADLEN-GFRAAN 384 (386)
T ss_dssp CSSSCEEEEGGGTTTTTSCHHHHHHHTCCTTEEEEECCSSCHHHHHHHHHH-HHHHHT
T ss_pred CCcceeeecccccccccCCHHHHHhcCCCCCeEEEEEccCCHHHHHHHHHH-HHHHhh
Confidence 2211 1 125799999999999999999998 877654
No 173
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=92.53 E-value=0.74 Score=37.55 Aligned_cols=30 Identities=3% Similarity=-0.092 Sum_probs=23.8
Q ss_pred CCCCceEEEEeeCCCCHHHHHHHHHHHHHHHH
Q psy5049 103 ALNDGLSLYESSHLRSANLWNRPHSPSLMAVF 134 (153)
Q Consensus 103 P~g~~RlRI~lsA~HT~edId~L~~~~L~~~~ 134 (153)
+.+...+||+++.. |+++|+++++ .|..+.
T Consensus 383 ~~~~~~iRis~~~~-~~~~i~~~~~-~l~~~l 412 (423)
T 3ez1_A 383 DPHNRNLRLAPTRP-PVEEVRTAMQ-VVAACI 412 (423)
T ss_dssp CSSSCEEEECCSSS-CHHHHHHHHH-HHHHHH
T ss_pred CCCCCeEEEEcCCC-CHHHHHHHHH-HHHHHH
Confidence 45678999999555 9999999988 776544
No 174
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=92.31 E-value=0.42 Score=38.32 Aligned_cols=81 Identities=6% Similarity=-0.161 Sum_probs=49.5
Q ss_pred hHHHHHHHHHHHHHHHHHHhCCCcccCCCCCC-eEEEEcCCc---hHHHhcc---ccccCCCC---CCCCceEEEEeeCC
Q psy5049 47 IRRISVLAHNTRYFRRKLNRLGLIVYGHRDSP-VVPVLVFFF---SKVGQTS---IGLGVEQT---ALNDGLSLYESSHL 116 (153)
Q Consensus 47 ~~rr~~L~~ni~~fr~~L~~~G~~~~~~s~SP-IiPV~~g~~---~~~~~~a---~~i~~PtV---P~g~~RlRI~lsA~ 116 (153)
++.+++++++..++.+.|.+. +.+.. +.+. .+.+-+.+. ....+.. .....|.. +.+...+||+++.
T Consensus 283 ~~~~~~~~~~~~~l~~~L~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~f~~~~~~~~Ris~~~- 359 (376)
T 2dou_A 283 RGYARVYRERALGMAEALKGV-LSLLP-PRATMYLWGRLPEGVDDLEFGLRLVERGVALAPGRGFGPGGKGFVRIALVR- 359 (376)
T ss_dssp HHHHHHHHHHHHHHHHHHTTT-SEECC-CCBSSEEEEECCTTCCHHHHHHHHHHTTEECEEGGGGCGGGTTEEEEECCS-
T ss_pred HHHHHHHHHHHHHHHHHHHHh-cCccC-CCeeEEEEEECCCCCCHHHHHHHHHHCCEEEcCchhhCCCCCCeEEEEecC-
Confidence 567788899999999999887 65532 3333 455555432 2222221 11111111 2246789999975
Q ss_pred CCHHHHHHHHHHHHHH
Q psy5049 117 RSANLWNRPHSPSLMA 132 (153)
Q Consensus 117 HT~edId~L~~~~L~~ 132 (153)
++++++++++ .++.
T Consensus 360 -~~~~i~~~l~-~l~~ 373 (376)
T 2dou_A 360 -PLEELLEAAK-RIRE 373 (376)
T ss_dssp -CHHHHHHHHH-HHHH
T ss_pred -CHHHHHHHHH-HHHH
Confidence 8999999777 5543
No 175
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=92.24 E-value=0.86 Score=37.46 Aligned_cols=86 Identities=14% Similarity=0.048 Sum_probs=49.6
Q ss_pred hHHHHHHHHHHHHHHHHHHh----CC-CcccCCCCCCeEEEEcCC--chHHHhcc----ccc-----cCCCCC-CCCceE
Q psy5049 47 IRRISVLAHNTRYFRRKLNR----LG-LIVYGHRDSPVVPVLVFF--FSKVGQTS----IGL-----GVEQTA-LNDGLS 109 (153)
Q Consensus 47 ~~rr~~L~~ni~~fr~~L~~----~G-~~~~~~s~SPIiPV~~g~--~~~~~~~a----~~i-----~~PtVP-~g~~Rl 109 (153)
.+.++.++++..++.+.|.+ .| +.+...+.+..+-+-+.+ .+.+.... +.+ .|+..+ .+...+
T Consensus 313 ~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~l~~~gV~v~~~g~~f~~~~~~~~~~i 392 (422)
T 3d6k_A 313 LKHAASLAPKFERVLEILDSRLSEYGVAKWTSPTGGYFISVDVVPGTASRVVELAKEAGIALTGAGSSFPLHNDPNNENI 392 (422)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHGGGTCEEECCCSBSSCEEEEESTTCHHHHHHHHHHTTEECCCTTTTSGGGCCTTSCEE
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCcCCceEEeCCCcceEEEEECCCCCHHHHHHHHHHCCeEEEcCccccCCCCCCCCCeE
Confidence 33466666677777777754 34 332222334445555543 23333322 222 233222 246789
Q ss_pred EEEeeCCCCHHHHHHHHHHHHHHHH
Q psy5049 110 LYESSHLRSANLWNRPHSPSLMAVF 134 (153)
Q Consensus 110 RI~lsA~HT~edId~L~~~~L~~~~ 134 (153)
||+++. +|+++++++++ .|+.+.
T Consensus 393 Ris~~~-~~~e~i~~~~~-~l~~~l 415 (422)
T 3d6k_A 393 RLAPSL-PPVAELEVAMD-GFATCV 415 (422)
T ss_dssp EECCSS-SCHHHHHHHHH-HHHHHH
T ss_pred EEecCC-CCHHHHHHHHH-HHHHHH
Confidence 999998 99999999988 776554
No 176
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=92.22 E-value=0.48 Score=38.99 Aligned_cols=84 Identities=7% Similarity=-0.072 Sum_probs=52.4
Q ss_pred chHHHHHHHHHHHHHHHHHHhC----CCcccCCCCCCeEEEEcCCc-------------hHHHhcc-----ccc-cCCCC
Q psy5049 46 GIRRISVLAHNTRYFRRKLNRL----GLIVYGHRDSPVVPVLVFFF-------------SKVGQTS-----IGL-GVEQT 102 (153)
Q Consensus 46 ~~~rr~~L~~ni~~fr~~L~~~----G~~~~~~s~SPIiPV~~g~~-------------~~~~~~a-----~~i-~~PtV 102 (153)
.++.+++++++..++++.|++. ++.....+...++.+.+.+. ..+..+. ..+ ..|.
T Consensus 322 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~- 400 (434)
T 3l44_A 322 QEGLYEKLDELGATLEKGILEQAAKHNIDITLNRLKGALTVYFTTNTIEDYDAAQDTDGEMFGKFFKLMLQEGVNLAPS- 400 (434)
T ss_dssp STTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEETTEEEEEESSSCCCSHHHHHHSCHHHHHHHHHHHHHTTEECCSS-
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEeeccEEEEEEecCcccchhhccccCHHHHHHHHHHHHHCCeEEeec-
Confidence 4678999999999999999864 43211123456777766321 1112221 222 2222
Q ss_pred CCCCceEEEEeeCCCCHHHHHHHHHHHHHHHHh
Q psy5049 103 ALNDGLSLYESSHLRSANLWNRPHSPSLMAVFR 135 (153)
Q Consensus 103 P~g~~RlRI~lsA~HT~edId~L~~~~L~~~~~ 135 (153)
+...+|+ +..+|+||++++++ +|+.+.+
T Consensus 401 --~~~~~rl--~~~~t~e~i~~~l~-~l~~~l~ 428 (434)
T 3l44_A 401 --KYEAWFL--TTEHTKEDIEYTIE-AVGRAFA 428 (434)
T ss_dssp --TTCCEEC--CTTCCHHHHHHHHH-HHHHHHH
T ss_pred --CCCcEEE--ecccCHHHHHHHHH-HHHHHHH
Confidence 3456776 57999999999998 7776543
No 177
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=92.06 E-value=0.43 Score=38.97 Aligned_cols=86 Identities=12% Similarity=-0.012 Sum_probs=56.1
Q ss_pred chHHHHHHHHHHHHHHHHHHhCC---------Cc------ccC---CCCCCeEEEEcCCc-hHHHhcc-------ccc--
Q psy5049 46 GIRRISVLAHNTRYFRRKLNRLG---------LI------VYG---HRDSPVVPVLVFFF-SKVGQTS-------IGL-- 97 (153)
Q Consensus 46 ~~~rr~~L~~ni~~fr~~L~~~G---------~~------~~~---~s~SPIiPV~~g~~-~~~~~~a-------~~i-- 97 (153)
..++.+++.+|..++.+.|.+.+ +. +.. .+.++++.+-+.+. ..+..+. ..+
T Consensus 261 ~~~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~ 340 (398)
T 2rfv_A 261 LGIRMERHCENALKIARFLEGHPSITRVYYPGLSSHPQYELGQRQMSLPGGIISFEIAGGLEAGRRMINSVELCLLAVSL 340 (398)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTHHHHHHHHHTTCSSSEECSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCCHHHHHHHHHhCCcceeccCC
Confidence 45677889999999999998754 11 000 13478888877643 2333332 111
Q ss_pred -------cCCCC------C------CC--CceEEEEeeCCCCHHHHHHHHHHHHHH
Q psy5049 98 -------GVEQT------A------LN--DGLSLYESSHLRSANLWNRPHSPSLMA 132 (153)
Q Consensus 98 -------~~PtV------P------~g--~~RlRI~lsA~HT~edId~L~~~~L~~ 132 (153)
.+|+. | .| .+.+|++++..+++++|+.+.+ +++.
T Consensus 341 G~~~~li~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~-al~~ 395 (398)
T 2rfv_A 341 GDTETLIQHPASMTHSPVAPEERLKAGITDGLIRLSVGLEDPEDIINDLEH-AIRK 395 (398)
T ss_dssp SSSSCEEECHHHHTSSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHH-HHHH
T ss_pred CCcceeeecccccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHH-HHHh
Confidence 12321 1 12 6899999999999999999988 7764
No 178
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=92.06 E-value=0.43 Score=39.38 Aligned_cols=82 Identities=9% Similarity=-0.072 Sum_probs=52.6
Q ss_pred hHHHHHHHHHHHHHHHHHHhC----CCcccCCCCCCeEEEEcCCc-------------hHHHhcc------ccccCCCCC
Q psy5049 47 IRRISVLAHNTRYFRRKLNRL----GLIVYGHRDSPVVPVLVFFF-------------SKVGQTS------IGLGVEQTA 103 (153)
Q Consensus 47 ~~rr~~L~~ni~~fr~~L~~~----G~~~~~~s~SPIiPV~~g~~-------------~~~~~~a------~~i~~PtVP 103 (153)
+++.++++++..++++.|.+. ++.....+...++.+.+.+. ....++. .....|.
T Consensus 324 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~-- 401 (434)
T 2epj_A 324 EPVYSVSREAAKALEEAASEVLDRTGLPYTINRVESMMQLFIGVEEVSNAAQARKADKKFYVKLHEEMLRRGVFIAPS-- 401 (434)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEETTEEEEEETCSCCSSHHHHTTSCHHHHHHHHHHHHHTTEECCSS--
T ss_pred cCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEeeeEEEEEEeCCCcccchhccccCHHHHHHHHHHHHHCCeEEecc--
Confidence 568899999999999999875 65321124467888877641 1122222 2223333
Q ss_pred CCCceEEEEeeCCCCHHHHHHHHHHHHHHHH
Q psy5049 104 LNDGLSLYESSHLRSANLWNRPHSPSLMAVF 134 (153)
Q Consensus 104 ~g~~RlRI~lsA~HT~edId~L~~~~L~~~~ 134 (153)
+.. |+.++..||++|++++++ +|+.+.
T Consensus 402 -~~~--~~~~~~~~t~e~i~~~l~-~l~~~l 428 (434)
T 2epj_A 402 -NLE--AVFTGLPHQGEALEIAVE-GLRSSL 428 (434)
T ss_dssp -TTS--CEECCTTCSHHHHHHHHH-HHHHHH
T ss_pred -CCC--cEEEeccCCHHHHHHHHH-HHHHHH
Confidence 223 455678999999999998 776554
No 179
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=91.80 E-value=0.59 Score=38.83 Aligned_cols=99 Identities=13% Similarity=0.009 Sum_probs=58.1
Q ss_pred chHHHHHHHHHHHHHHHHHHhC----CCcccCCCCCCeEEEEcCC-----c--------------hHHHhcc-----ccc
Q psy5049 46 GIRRISVLAHNTRYFRRKLNRL----GLIVYGHRDSPVVPVLVFF-----F--------------SKVGQTS-----IGL 97 (153)
Q Consensus 46 ~~~rr~~L~~ni~~fr~~L~~~----G~~~~~~s~SPIiPV~~g~-----~--------------~~~~~~a-----~~i 97 (153)
.++..++++++..++++.|++. ++.....+...++.|.+.+ . ....++. ..|
T Consensus 323 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gv 402 (453)
T 2cy8_A 323 EDDVCAKINDLGQFAREAMNHLFARKGLNWLAYGRFSGFHLMPGLPPNTTDTGSITRAEVARPDVKMIAAMRMALILEGV 402 (453)
T ss_dssp HTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCTTEEEEEETSCTTCCCCHHHHTTCSCCCCHHHHHHHHHHHHHTTE
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEeeeEEEEEEeccccccccccccccccccccHHHHHHHHHHHHHCCe
Confidence 3567899999999999999865 5432113456788888764 1 1122222 222
Q ss_pred -cCCCCCCCCceEEEEeeCCCCHHHHHHHHHHHHHHH-HhcCCCceeeeccccccCC
Q psy5049 98 -GVEQTALNDGLSLYESSHLRSANLWNRPHSPSLMAV-FRGGGPGIFPLQHRADSEN 152 (153)
Q Consensus 98 -~~PtVP~g~~RlRI~lsA~HT~edId~L~~~~L~~~-~~~~~~~~~~~~~~~~~~~ 152 (153)
..| . .++| ++..||++|++++++ +|+.+ .+....|.++-+.+.-|.|
T Consensus 403 ~v~~---~--~~~~--l~~~~t~~~i~~~l~-~l~~~l~~~~~~~~~~~~~~~~~~~ 451 (453)
T 2cy8_A 403 DIGG---R--GSVF--LSAQHEREHVEHLVT-TFDRVLDRLADENLLSWQGTNLSGN 451 (453)
T ss_dssp ECBT---T--TEEE--CCTTCCHHHHHHHHH-HHHHHHHHHHHTTCCCCCC------
T ss_pred EEeC---C--CCEE--eeccCCHHHHHHHHH-HHHHHHHHHHhCCCccccccccCCC
Confidence 222 2 2444 579999999999998 77544 3333446677666655443
No 180
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=91.77 E-value=0.83 Score=36.93 Aligned_cols=83 Identities=4% Similarity=-0.165 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHHHHHHHhC----CCcccCCCCCCeEEEEcCC----chHHHhcc----ccc----c-CCCCCC----CCc
Q psy5049 49 RISVLAHNTRYFRRKLNRL----GLIVYGHRDSPVVPVLVFF----FSKVGQTS----IGL----G-VEQTAL----NDG 107 (153)
Q Consensus 49 rr~~L~~ni~~fr~~L~~~----G~~~~~~s~SPIiPV~~g~----~~~~~~~a----~~i----~-~PtVP~----g~~ 107 (153)
.+++++++..++.+.|.+. |+.+.....+..+.+-+.. ........ +.+ . ++..+. +..
T Consensus 307 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~f~~~~~~~~~~~~~ 386 (417)
T 3g7q_A 307 IKPFYYQRVQQTIAIIRRYLSEERCLIHKPEGAIFLWLWFKDLPITTELLYQRLKARGVLMVPGHYFFPGLDKPWPHTHQ 386 (417)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCTTTCEEECCCBSSEEEEECTTCSSCHHHHHHHHHHTTEECEEGGGGCTTBSSCCGGGGG
T ss_pred HHHHHHHHHHHHHHHHHHhcccCCceeeCCCcceEEEEEcCCCCCCHHHHHHHHHHCCEEEECchhhCCCCccccccCCC
Confidence 5667788888888888753 4544333334555555543 22222222 111 1 222111 157
Q ss_pred eEEEEeeCCCCHHHHHHHHHHHHHHHH
Q psy5049 108 LSLYESSHLRSANLWNRPHSPSLMAVF 134 (153)
Q Consensus 108 RlRI~lsA~HT~edId~L~~~~L~~~~ 134 (153)
.+||+++. |+|||+++++ .|..+.
T Consensus 387 ~iRis~~~--~~~~i~~~~~-~l~~~l 410 (417)
T 3g7q_A 387 CMRMNYVP--EPDKIEAGVK-ILAEEI 410 (417)
T ss_dssp EEEEESCS--CHHHHHHHHH-HHHHHH
T ss_pred eEEEEecC--CHHHHHHHHH-HHHHHH
Confidence 89999975 9999999988 776544
No 181
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=91.64 E-value=0.63 Score=38.29 Aligned_cols=84 Identities=8% Similarity=-0.046 Sum_probs=50.4
Q ss_pred chHHHHHHHHHHHHHHHHHHhC----CCcccCCCCCCeEEEEcCCc--------------hHHHhcc-----ccc-cCCC
Q psy5049 46 GIRRISVLAHNTRYFRRKLNRL----GLIVYGHRDSPVVPVLVFFF--------------SKVGQTS-----IGL-GVEQ 101 (153)
Q Consensus 46 ~~~rr~~L~~ni~~fr~~L~~~----G~~~~~~s~SPIiPV~~g~~--------------~~~~~~a-----~~i-~~Pt 101 (153)
.++..++++++..++++.|.+. ++.....+...++.+.+.+. ..+.++. ..+ ..|.
T Consensus 320 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~ 399 (429)
T 4e77_A 320 QVGVYETLTELTDSLATGLRHAAKEENIPLVVNHVGGMFGLFFTNADTVTCYQDVMNCDVERFKRFFHLMLEEGVYLAPS 399 (429)
T ss_dssp STTHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEEEEECCSSSCCCSHHHHHTSCHHHHHHHHHHHHHTTEECCSS
T ss_pred hcCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeEEEEEEccCcccccccccccccHHHHHHHHHHHHHCCeEEeec
Confidence 4778999999999999999764 43221112234555555432 1122222 222 2222
Q ss_pred CCCCCceEEEEeeCCCCHHHHHHHHHHHHHHHHh
Q psy5049 102 TALNDGLSLYESSHLRSANLWNRPHSPSLMAVFR 135 (153)
Q Consensus 102 VP~g~~RlRI~lsA~HT~edId~L~~~~L~~~~~ 135 (153)
+..++ .++..+|+||++++++ +|+.+.+
T Consensus 400 ---~~~~~--~~~~~~t~e~i~~~l~-~l~~~l~ 427 (429)
T 4e77_A 400 ---AFEAG--FMSLAHSNEDIQKTVN-AARRCFA 427 (429)
T ss_dssp ---TTSCE--ECCTTCCHHHHHHHHH-HHHHHHT
T ss_pred ---CCCCE--EEeccCCHHHHHHHHH-HHHHHHH
Confidence 23444 5579999999999998 7776543
No 182
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=91.61 E-value=0.55 Score=38.61 Aligned_cols=83 Identities=4% Similarity=-0.137 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHHHHHHHhC----CCcccCCCCCCeEEEEcCC----chHHHhcc----ccc---c--CCCC-----CCCC
Q psy5049 49 RISVLAHNTRYFRRKLNRL----GLIVYGHRDSPVVPVLVFF----FSKVGQTS----IGL---G--VEQT-----ALND 106 (153)
Q Consensus 49 rr~~L~~ni~~fr~~L~~~----G~~~~~~s~SPIiPV~~g~----~~~~~~~a----~~i---~--~PtV-----P~g~ 106 (153)
.++.++++..++.+.|.+. |+.+.....+..+.+-+.. .......+ +.+ . ++.. +.+.
T Consensus 333 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~ 412 (444)
T 3if2_A 333 IKPFYQKQATLAVKLLKQALGDYPLMIHKPEGAIFLWLWFKDLPISTLDLYERLKAKGTLIVPSEYFFPGVDVSDYQHAH 412 (444)
T ss_dssp HHHHHHHHHHHHHHHHHHHSSSSSEEEECCCBSSEEEEEETTCSSCHHHHHHHHHHTTEECEEGGGSCTTCCCTTCSGGG
T ss_pred HHHHHHHHHHHHHHHHHHhcccCCceEecCCccEEEEEEcCCCCCCHHHHHHHHHHCCeEEecchhhcCCCCCcccccCC
Confidence 5667777888888887653 4443323335555555543 22222222 111 1 1221 1234
Q ss_pred ceEEEEeeCCCCHHHHHHHHHHHHHHHH
Q psy5049 107 GLSLYESSHLRSANLWNRPHSPSLMAVF 134 (153)
Q Consensus 107 ~RlRI~lsA~HT~edId~L~~~~L~~~~ 134 (153)
..+||+++. |+++|+++++ .|..+.
T Consensus 413 ~~iRis~~~--~~e~i~~~l~-~l~~~~ 437 (444)
T 3if2_A 413 ECIRMSIAA--DEQTLIDGIK-VIGEVV 437 (444)
T ss_dssp SEEEEESSS--CHHHHHHHHH-HHHHHH
T ss_pred CeEEEEEeC--CHHHHHHHHH-HHHHHH
Confidence 689999997 9999999988 776554
No 183
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=91.54 E-value=0.22 Score=43.20 Aligned_cols=88 Identities=11% Similarity=-0.015 Sum_probs=52.3
Q ss_pred cccccchHHHHHHHHHHHHHHHHHHhC----CCcccCCCCCCeEEEEcCCc-------------hHHHhcc-----ccc-
Q psy5049 41 ICFISGIRRISVLAHNTRYFRRKLNRL----GLIVYGHRDSPVVPVLVFFF-------------SKVGQTS-----IGL- 97 (153)
Q Consensus 41 l~~~~~~~rr~~L~~ni~~fr~~L~~~----G~~~~~~s~SPIiPV~~g~~-------------~~~~~~a-----~~i- 97 (153)
+.-.+.++..++++++..+|+++|+++ ++.....+..-++.|.+.+. +....+. ..|
T Consensus 335 L~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~G~m~gi~f~~~~~~~~~~~~~~d~~~~~~~~~~ll~~Gv~ 414 (454)
T 4ao9_A 335 LTKLFTPEAAGALAERGEALRARLNALCANEGVAMQFTGIGSLMNAHFVQGDVRSSEDLAAVDGRLRQLLFFHLLNEDIY 414 (454)
T ss_dssp HHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHTBSCEEEEETTEEEEESCCSCCCSGGGGTTCCHHHHHHHHHHHHHTTEE
T ss_pred HHHHhccChhHHHHHHHHHHHHHHHHHHhhCCCCEEEeeeceEEEEEEecCCCCCHHHHHhhhHHHHHHHHHHHHHCCEE
Confidence 334456889999999999999999754 32110011123444444221 1111111 222
Q ss_pred cCCCCCCCCceEEEEeeCCCCHHHHHHHHHHHHHHHHhc
Q psy5049 98 GVEQTALNDGLSLYESSHLRSANLWNRPHSPSLMAVFRG 136 (153)
Q Consensus 98 ~~PtVP~g~~RlRI~lsA~HT~edId~L~~~~L~~~~~~ 136 (153)
..| .+ ++.++..||+||||++++ +++++...
T Consensus 415 ~~p---~~----~~~~s~~~T~~dId~~l~-al~~~l~~ 445 (454)
T 4ao9_A 415 SSP---RG----FVVLSLPLTDADIDRYVA-AIGSFIGG 445 (454)
T ss_dssp CCT---TC----EEECCTTCCHHHHHHHHH-HHHHHHHH
T ss_pred EcC---CC----CEEEeCCCCHHHHHHHHH-HHHHHHHh
Confidence 333 22 567899999999999999 88766554
No 184
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=91.40 E-value=0.35 Score=38.31 Aligned_cols=79 Identities=9% Similarity=-0.008 Sum_probs=49.6
Q ss_pred HHHHHHHHHHHHHHHHHHhC-CCccc-CCCCCCeEEEEcCCch-----HHHhcc----ccc---cCCCCCCCCceEEEEe
Q psy5049 48 RRISVLAHNTRYFRRKLNRL-GLIVY-GHRDSPVVPVLVFFFS-----KVGQTS----IGL---GVEQTALNDGLSLYES 113 (153)
Q Consensus 48 ~rr~~L~~ni~~fr~~L~~~-G~~~~-~~s~SPIiPV~~g~~~-----~~~~~a----~~i---~~PtVP~g~~RlRI~l 113 (153)
++.++..++..++.+.|++. |+.+. ..+.+..+.+.+.... ...+.. +.+ .++.. .|...+|+++
T Consensus 258 ~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~GV~v~~g~~~~~-~~~~~~r~~i 336 (359)
T 3pj0_A 258 GKMAEYFEAAKGLAERFNSCSGVKTVPEVPVSNMFHVYFENSADEIGAILTKIQDETGVGISGYLQEKS-ADVCAFEVSV 336 (359)
T ss_dssp GGHHHHHHHHHHHHHHHHTSTTEEEESSSCSSSEEEEEESSCHHHHHHHHHHHHHHHCEECCSCCEEEE-TTEEEEEEEC
T ss_pred HHhHHHHHHHHHHHHHHhhCCCceeeccCCcceEEEEEecCccchhHHHHHHHHHhcCcEecCCccccC-CCceEEEEEe
Confidence 55667888999999999987 77652 2356777777776431 222222 222 22232 4678999999
Q ss_pred eCCC---CHHHHHHHHH
Q psy5049 114 SHLR---SANLWNRPHS 127 (153)
Q Consensus 114 sA~H---T~edId~L~~ 127 (153)
...+ +.|+++..++
T Consensus 337 ~~~~~~~~~e~l~~~l~ 353 (359)
T 3pj0_A 337 GDAFAEIPAKNLELVFR 353 (359)
T ss_dssp CTTGGGSCHHHHHHHHH
T ss_pred cCccccCCHHHHHHHHH
Confidence 8775 5556655444
No 185
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=91.37 E-value=0.69 Score=38.12 Aligned_cols=83 Identities=7% Similarity=-0.050 Sum_probs=51.5
Q ss_pred hHHHHHHHHHHHHHHHHHHhC----CCcccCCCCCCeEEEEcCCc-------------hHHHhcc-----ccc-cCCCCC
Q psy5049 47 IRRISVLAHNTRYFRRKLNRL----GLIVYGHRDSPVVPVLVFFF-------------SKVGQTS-----IGL-GVEQTA 103 (153)
Q Consensus 47 ~~rr~~L~~ni~~fr~~L~~~----G~~~~~~s~SPIiPV~~g~~-------------~~~~~~a-----~~i-~~PtVP 103 (153)
++.+++++++..++++.|++. +......+...++.+.+.++ ..+..+. ..+ ..|
T Consensus 320 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~--- 396 (429)
T 3k28_A 320 PESYVEFERKAEMLEAGLRKAAEKHGIPHHINRAGSMIGIFFTDEPVINYDAAKSSNLQFFAAYYREMVEQGVFLPP--- 396 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEEEEESSSSCCCSHHHHTTSCHHHHHHHHHHHHHTTEECCS---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCCCEEEEeeccEEEEEEecCCcccccccccccHHHHHHHHHHHHHCCeEEec---
Confidence 788999999999999999865 32111112345566655321 1112221 222 222
Q ss_pred CCCceEEEEeeCCCCHHHHHHHHHHHHHHHHh
Q psy5049 104 LNDGLSLYESSHLRSANLWNRPHSPSLMAVFR 135 (153)
Q Consensus 104 ~g~~RlRI~lsA~HT~edId~L~~~~L~~~~~ 135 (153)
-+..++|+ +..+|+||++++++ +|+.+.+
T Consensus 397 ~~~~~~r~--~~~~t~e~i~~~l~-~l~~~l~ 425 (429)
T 3k28_A 397 SQFEGLFL--STVHSDADIEATIA-AAEIAMS 425 (429)
T ss_dssp STTSCBCC--CTTCCHHHHHHHHH-HHHHHHH
T ss_pred CCCCCEEE--ECCCCHHHHHHHHH-HHHHHHH
Confidence 24567787 57999999999998 7876654
No 186
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=91.18 E-value=1.1 Score=38.72 Aligned_cols=83 Identities=1% Similarity=-0.139 Sum_probs=50.0
Q ss_pred hHHHHHHHHHHHHHHHHHHhCCCcccCCCCCCeEEEE-c--------C-----------Cc-hHHHhcc-------cccc
Q psy5049 47 IRRISVLAHNTRYFRRKLNRLGLIVYGHRDSPVVPVL-V--------F-----------FF-SKVGQTS-------IGLG 98 (153)
Q Consensus 47 ~~rr~~L~~ni~~fr~~L~~~G~~~~~~s~SPIiPV~-~--------g-----------~~-~~~~~~a-------~~i~ 98 (153)
.+.+++++++..+|.+.|. .|+... .+++....+. + + +. +.+..+. .+..
T Consensus 413 ~~~~~~~~~r~~~l~~~L~-~~~~~~-~~~~g~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~ll~~~GV~v~pg~ 490 (533)
T 3f6t_A 413 DIARKLVSERYDQLHDAMQ-APKDET-DTNTHYYSLIDIYRLAEKIYGKEFRDYLTNNFEQVDFLLKLAEKNGVVLVDGV 490 (533)
T ss_dssp HHHHHHHHHHHHHHHHHHT-CCCCCS-TTBCCSEEEEEHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHTTSSSCTTE
T ss_pred HHHHHHHHHHHHHHHHhcC-CCcccc-CCCceEEEEEehHhhhhhccchHHHHHhhccCCHHHHHHHHHHhCCEEEeCCc
Confidence 5678888999999999997 776543 2333322111 1 1 11 1111221 2222
Q ss_pred CCCCCCCCceEEEEeeCCCCHHHHHHHHHHHHHHHHh
Q psy5049 99 VEQTALNDGLSLYESSHLRSANLWNRPHSPSLMAVFR 135 (153)
Q Consensus 99 ~PtVP~g~~RlRI~lsA~HT~edId~L~~~~L~~~~~ 135 (153)
++.+| ...+|+++ +.++++|++++++ .|..+.+
T Consensus 491 ~f~~~--~~~iRls~-a~~~~e~i~~~i~-~L~~~l~ 523 (533)
T 3f6t_A 491 GFGAK--PGELRVSQ-ANLPTEDYALIGK-QVLELLK 523 (533)
T ss_dssp EECSS--TTEEEEES-SSSCHHHHHHHHH-HHHHHHH
T ss_pred ccCCC--CCEEEEEE-eeCCHHHHHHHHH-HHHHHHH
Confidence 33434 56999999 6689999999988 7765543
No 187
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=91.14 E-value=0.94 Score=37.24 Aligned_cols=86 Identities=9% Similarity=-0.023 Sum_probs=52.4
Q ss_pred hHHHHHHHHHHHHHHHHHHhC--CCc-ccCCCCCCeEEEEcCC---chH-HHhcc----ccc---cCCCCC--CCCceEE
Q psy5049 47 IRRISVLAHNTRYFRRKLNRL--GLI-VYGHRDSPVVPVLVFF---FSK-VGQTS----IGL---GVEQTA--LNDGLSL 110 (153)
Q Consensus 47 ~~rr~~L~~ni~~fr~~L~~~--G~~-~~~~s~SPIiPV~~g~---~~~-~~~~a----~~i---~~PtVP--~g~~RlR 110 (153)
.+.+++++++..++.+.|.+. |+. +...+.+..+.+-+.+ ... +.... +.+ .....+ .+...+|
T Consensus 320 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~l~~~gv~v~pg~~f~~~~~~~~~~iR 399 (425)
T 2r2n_A 320 DRVIDFYSNQKDAILAAADKWLTGLAEWHVPAAGMFLWIKVKGINDVKELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLR 399 (425)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCSSSEEECCCSBSSEEEEEETTCSCCHHHHHTHHHHTTEECEEGGGGSSSTTSCCCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCeEEeCCCceEEEEEEeCCCCCHHHHHHHHHHHCCcEEechhhhcCCCCCCCCEEE
Confidence 456778888889999999874 652 2223445566665543 222 23222 111 111112 3457899
Q ss_pred EEeeCCCCHHHHHHHHHHHHHHHH
Q psy5049 111 YESSHLRSANLWNRPHSPSLMAVF 134 (153)
Q Consensus 111 I~lsA~HT~edId~L~~~~L~~~~ 134 (153)
|+++. .|+++++++++ .|+.+.
T Consensus 400 is~~~-~~~~~i~~~~~-~l~~~l 421 (425)
T 2r2n_A 400 ASFSS-ASPEQMDVAFQ-VLAQLI 421 (425)
T ss_dssp EECSS-CCHHHHHHHHH-HHHHHH
T ss_pred EEeCC-CCHHHHHHHHH-HHHHHH
Confidence 99985 69999999988 776554
No 188
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=91.05 E-value=0.32 Score=40.77 Aligned_cols=85 Identities=2% Similarity=-0.139 Sum_probs=52.9
Q ss_pred chHHHHHHH-HHHHHHHHHH-HhCC-Cccc--CCCCCCeEEEEcCCchH-----------HHhcc------ccccCCCCC
Q psy5049 46 GIRRISVLA-HNTRYFRRKL-NRLG-LIVY--GHRDSPVVPVLVFFFSK-----------VGQTS------IGLGVEQTA 103 (153)
Q Consensus 46 ~~~rr~~L~-~ni~~fr~~L-~~~G-~~~~--~~s~SPIiPV~~g~~~~-----------~~~~a------~~i~~PtVP 103 (153)
.++..++++ ++..++++.| ..++ +... ..+...++.+.+.++.. +..+. ..+..|.
T Consensus 341 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~-- 418 (459)
T 4a6r_A 341 DEGIVQRVKDDIGPYMQKRWRETFSRFEHVDDVRGVGMVQAFTLVKNKAKRELFPDFGEIGTLCRDIFFRNNLIMRAC-- 418 (459)
T ss_dssp HTCHHHHHHHTHHHHHHHHHHHHHTTCTTEEEEEEETTEEEEEECSBTTTTBCCSSTTHHHHHHHHHHHHTTEECEEE--
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEEEEEEEEEEecCccccccccchHHHHHHHHHHHHHCCeEEecC--
Confidence 467788999 9999999999 5432 1110 11334555665543211 22222 2222232
Q ss_pred CCCceEEEEeeCCCCHHHHHHHHHHHHHHHHh
Q psy5049 104 LNDGLSLYESSHLRSANLWNRPHSPSLMAVFR 135 (153)
Q Consensus 104 ~g~~RlRI~lsA~HT~edId~L~~~~L~~~~~ 135 (153)
| ..+||+++..+|+||++++++ +|+.+.+
T Consensus 419 -g-~~iRi~~~~~~t~e~i~~~l~-~l~~~l~ 447 (459)
T 4a6r_A 419 -G-DHIVSAPPLVMTRAEVDEMLA-VAERCLE 447 (459)
T ss_dssp -T-TEEEECCCTTCCHHHHHHHHH-HHHHHHH
T ss_pred -C-CEEEEECCCCCCHHHHHHHHH-HHHHHHH
Confidence 3 899999999999999999998 7765543
No 189
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=90.91 E-value=0.84 Score=36.88 Aligned_cols=75 Identities=11% Similarity=-0.035 Sum_probs=45.6
Q ss_pred hHHHHHHHHHHHHHHHHHHhCCCcccCCCCC-CeEEEEc--C-CchHHHhcc--------ccccCCCCCCCCceEEEEee
Q psy5049 47 IRRISVLAHNTRYFRRKLNRLGLIVYGHRDS-PVVPVLV--F-FFSKVGQTS--------IGLGVEQTALNDGLSLYESS 114 (153)
Q Consensus 47 ~~rr~~L~~ni~~fr~~L~~~G~~~~~~s~S-PIiPV~~--g-~~~~~~~~a--------~~i~~PtVP~g~~RlRI~ls 114 (153)
++.+++++++..++.+.|++.|+.+...... .+.+.+- + +.....+.. .+..|.. ...+||+++
T Consensus 290 ~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gv~v~~g~~f~~----~~~iRis~~ 365 (385)
T 1b5p_A 290 EMAREAYRRRRDLLLEGLTALGLKAVRPSGAFYVLMDTSPIAPDEVRAAERLLEAGVAVVPGTDFAA----FGHVRLSYA 365 (385)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCBCCCSBTTEEEEECTTTCSSHHHHHHHHHHTTEECEESGGGTC----TTEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCeecCCCeeEEEEEecCCCCCCHHHHHHHHHHCCeEEecccccCC----CCeEEEEec
Confidence 4577888899999999999888766432222 2333332 1 222222222 2223322 468999987
Q ss_pred CCCCHHHHHHHHH
Q psy5049 115 HLRSANLWNRPHS 127 (153)
Q Consensus 115 A~HT~edId~L~~ 127 (153)
+++++|++.++
T Consensus 366 --~~~~~i~~~l~ 376 (385)
T 1b5p_A 366 --TSEENLRKALE 376 (385)
T ss_dssp --SCHHHHHHHHH
T ss_pred --CCHHHHHHHHH
Confidence 89999988666
No 190
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=90.88 E-value=0.84 Score=37.41 Aligned_cols=83 Identities=8% Similarity=0.017 Sum_probs=51.6
Q ss_pred hHHHHHHHHHHHHHHHHHHhC-CCcccCCCCCCeEE-EEcCC----chHHHhcc----ccccCCC---CCCCCceEEEEe
Q psy5049 47 IRRISVLAHNTRYFRRKLNRL-GLIVYGHRDSPVVP-VLVFF----FSKVGQTS----IGLGVEQ---TALNDGLSLYES 113 (153)
Q Consensus 47 ~~rr~~L~~ni~~fr~~L~~~-G~~~~~~s~SPIiP-V~~g~----~~~~~~~a----~~i~~Pt---VP~g~~RlRI~l 113 (153)
++++++++++..++++.|++. |+.+.. +....+. +-+.. .....+.. .....|. -+.+...+||++
T Consensus 323 ~~~~~~~~~~~~~l~~~L~~~~~i~~~~-~~~~~~~~v~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~ 401 (421)
T 3l8a_A 323 EELKTVIEGNIKLVIKELEAKTKIKVME-PEGTYLVWLDFSAYAIAQPQLSEKLQNEAKVVLNDGAHFGKEGKYFARLNV 401 (421)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCSCEEEC-CSBSSEEEEECGGGTCCTTHHHHHHHHTTCEECEEGGGGCGGGTTEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCceEeC-CCeeEEEEEeccccCCCHHHHHHHHHHhCCEEEECchhhCCCCCCEEEEEe
Confidence 667888899999999999885 765543 3344443 44432 22222211 1112221 134578999998
Q ss_pred eCCCCHHHHHHHHHHHHHHH
Q psy5049 114 SHLRSANLWNRPHSPSLMAV 133 (153)
Q Consensus 114 sA~HT~edId~L~~~~L~~~ 133 (153)
. +++++|+++++ .|+.+
T Consensus 402 ~--~~~~~i~~~l~-~l~~~ 418 (421)
T 3l8a_A 402 A--TPKNTVQEALS-RIISV 418 (421)
T ss_dssp C--SCHHHHHHHHH-HHHHH
T ss_pred c--CCHHHHHHHHH-HHHHH
Confidence 8 69999999887 66554
No 191
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=90.83 E-value=0.28 Score=39.94 Aligned_cols=79 Identities=11% Similarity=-0.031 Sum_probs=51.2
Q ss_pred chHHHHHHHHHHHHHHHHHHhCC----CcccCCCCCCeEEEEcCCc-hHHHhcc---ccccCCCCCCCCceEEEEeeCCC
Q psy5049 46 GIRRISVLAHNTRYFRRKLNRLG----LIVYGHRDSPVVPVLVFFF-SKVGQTS---IGLGVEQTALNDGLSLYESSHLR 117 (153)
Q Consensus 46 ~~~rr~~L~~ni~~fr~~L~~~G----~~~~~~s~SPIiPV~~g~~-~~~~~~a---~~i~~PtVP~g~~RlRI~lsA~H 117 (153)
..+.+++++++..++.+.|++.| +.+.. +.+.++ ++++-+ ..+..+. .....| .+||+++. +
T Consensus 323 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~l~~~gi~v~~-------~~Ris~~~-~ 392 (412)
T 1yaa_A 323 MVTMSSRITKMRHALRDHLVKLGTPGNWDHIV-NQCGMF-SFTGLTPQMVKRLEETHAVYLVA-------SGRASIAG-L 392 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCSSCCTHHH-HCCSSE-EECCCCHHHHHHHHHHHCEECCT-------TSEEEGGG-C
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCCCeeeec-cCceEE-EeeCCCHHHHHHHHHhCCEEecc-------CcEEEEcc-C
Confidence 45678888999999999999876 65432 334443 344432 3332222 222223 47999985 6
Q ss_pred CHHHHHHHHHHHHHHHHh
Q psy5049 118 SANLWNRPHSPSLMAVFR 135 (153)
Q Consensus 118 T~edId~L~~~~L~~~~~ 135 (153)
|++|++++++ +|+.+.+
T Consensus 393 ~~~~i~~~~~-~l~~~~~ 409 (412)
T 1yaa_A 393 NQGNVEYVAK-AIDEVVR 409 (412)
T ss_dssp CTTTHHHHHH-HHHHHHH
T ss_pred CHhHHHHHHH-HHHHHHH
Confidence 9999999998 8876654
No 192
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=90.70 E-value=1.7 Score=35.90 Aligned_cols=86 Identities=8% Similarity=0.008 Sum_probs=51.4
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCcccCCCCCCeEEEE-------cCC----chHH-Hhc-c---ccccC---------CC-
Q psy5049 48 RRISVLAHNTRYFRRKLNRLGLIVYGHRDSPVVPVL-------VFF----FSKV-GQT-S---IGLGV---------EQ- 101 (153)
Q Consensus 48 ~rr~~L~~ni~~fr~~L~~~G~~~~~~s~SPIiPV~-------~g~----~~~~-~~~-a---~~i~~---------Pt- 101 (153)
+..++..++..++++.|.+.|+.+.....+..+.+- +.. .... ..+ . ..+.+ |.
T Consensus 323 ~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~~g~~~~~~~~~~ 402 (467)
T 1ax4_A 323 EYLHYRIGQVKYLGDRLREAGIPIQYPTGGHAVFVDCKKLVPQIPGDQFPAQAVINALYLESGVRAVEIGSFLLGRDPAT 402 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCBCSSCCSSEEEEESTTTCTTSCGGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTT
T ss_pred hHHHHHHHHHHHHHHHHHhCCCCcccCCCceEEEEehhhhccccccCCCCHHHHHHHHHHhcCceeeecCcccccccccc
Confidence 355556688899999999878765433445555554 211 1111 112 1 11111 10
Q ss_pred ---CCCCCceEEEEeeC-CCCHHHHHHHHHHHHHHHH
Q psy5049 102 ---TALNDGLSLYESSH-LRSANLWNRPHSPSLMAVF 134 (153)
Q Consensus 102 ---VP~g~~RlRI~lsA-~HT~edId~L~~~~L~~~~ 134 (153)
.+.+...+||++.. .+|++|++++++ +|+.+.
T Consensus 403 g~~~~~~~~~iRls~~~~~~t~e~i~~~~~-~l~~~~ 438 (467)
T 1ax4_A 403 GEQKHADMEFMRLTIARRVYTNDHMDYIAD-ALIGLK 438 (467)
T ss_dssp CSBCCCSCCEEEEECCTTSSCHHHHHHHHH-HHHTTH
T ss_pred ccccccccceEEEecccccCCHHHHHHHHH-HHHHHH
Confidence 12235789999995 499999999998 776544
No 193
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=90.46 E-value=0.5 Score=40.32 Aligned_cols=49 Identities=8% Similarity=-0.077 Sum_probs=42.2
Q ss_pred cchHHHHHHHHHHHHHHHHHHhCCCcccCCCCCC-----eEEEEcCCchHHHhcc
Q psy5049 45 SGIRRISVLAHNTRYFRRKLNRLGLIVYGHRDSP-----VVPVLVFFFSKVGQTS 94 (153)
Q Consensus 45 ~~~~rr~~L~~ni~~fr~~L~~~G~~~~~~s~SP-----IiPV~~g~~~~~~~~a 94 (153)
..+.+++++++|+.++.+.|.+.|+.+. .+.++ |++|.+++++++.+++
T Consensus 296 ~~~~r~~~~~~~a~~la~~L~~~g~~V~-p~~~~~~~~~i~~i~l~~~~~~~~f~ 349 (427)
T 3i16_A 296 LAPHISMEALKGAILCSRIMELAGFEVM-PKYDEKRSDIIQSIKFNDKDKLIEFC 349 (427)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCEEE-SCTTSCCSSSCEEEECSSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCeec-CCCCCCCccEEEEEEECCHHHHHHHH
Confidence 3478999999999999999999999874 35677 9999999988887775
No 194
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=90.42 E-value=0.37 Score=38.79 Aligned_cols=76 Identities=5% Similarity=-0.173 Sum_probs=46.7
Q ss_pred chHHHHHHHHHHHHHHHHHHhC----CCcccCCCCCCeEEEEcC-CchHHHhcc---ccccCCCCCCCCceEEEEeeCCC
Q psy5049 46 GIRRISVLAHNTRYFRRKLNRL----GLIVYGHRDSPVVPVLVF-FFSKVGQTS---IGLGVEQTALNDGLSLYESSHLR 117 (153)
Q Consensus 46 ~~~rr~~L~~ni~~fr~~L~~~----G~~~~~~s~SPIiPV~~g-~~~~~~~~a---~~i~~PtVP~g~~RlRI~lsA~H 117 (153)
..+++++++++..++.+.|.+. |+.+.. +.+..+ ++++ +.+.+.... .....|. + ||++ +.+
T Consensus 312 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~l~~~gi~v~~g---~----Ris~-~~~ 381 (397)
T 3fsl_A 312 VEEMRTRILAMRQELVKVLSTEMPERNFDYLL-NQRGMF-SYTGLSAAQVDRLREEFGVYLIAS---G----RMCV-AGL 381 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCTTSCCTHHH-HCCSSE-EECCCCHHHHHHHHHTTCEECCTT---C----EEEG-GGC
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCceeec-CCceEE-EecCCCHHHHHHHHHhCCEEECCC---C----eEEE-Eec
Confidence 3677889999999999999987 565432 223333 3333 233333332 2223333 2 8888 456
Q ss_pred CHHHHHHHHHHHHHH
Q psy5049 118 SANLWNRPHSPSLMA 132 (153)
Q Consensus 118 T~edId~L~~~~L~~ 132 (153)
|++||+++++ +|+.
T Consensus 382 ~~~~i~~~~~-~l~~ 395 (397)
T 3fsl_A 382 NTANVQRVAK-AFAA 395 (397)
T ss_dssp CTTTHHHHHH-HHHH
T ss_pred CHhhHHHHHH-HHHh
Confidence 8889999888 6654
No 195
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=90.33 E-value=0.71 Score=38.41 Aligned_cols=84 Identities=10% Similarity=0.023 Sum_probs=50.5
Q ss_pred hHHHHHHHHHHHHHHHHHHhCCCcccCCCCCCeEEEEcCC-----------------c-hHHHh-cc----ccc----cC
Q psy5049 47 IRRISVLAHNTRYFRRKLNRLGLIVYGHRDSPVVPVLVFF-----------------F-SKVGQ-TS----IGL----GV 99 (153)
Q Consensus 47 ~~rr~~L~~ni~~fr~~L~~~G~~~~~~s~SPIiPV~~g~-----------------~-~~~~~-~a----~~i----~~ 99 (153)
.+.+++++++..++.+.|.+.|+.+.....+..+-+-+.. + ..... +. +.+ .|
T Consensus 330 ~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f 409 (447)
T 3b46_A 330 EKMRQEYINKFKIFTSIFDELGLPYTAPEGTYFVLVDFSKVKIPEDYPYPEEILNKGKDFRISHWLINELGVVAIPPTEF 409 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCEECCSBSSEEEEECTTCCCCTTCCCCGGGSSSCHHHHHHHHHHHHTCEECBCGGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCeecCCCeeEEEEEecccccCccccccccccccCCCHHHHHHHHHHhCCEEEECchHh
Confidence 4578889999999999999888876432323443333321 1 11221 11 111 12
Q ss_pred CC---CCCCCceEEEEeeCCCCHHHHHHHHHHHHHHH
Q psy5049 100 EQ---TALNDGLSLYESSHLRSANLWNRPHSPSLMAV 133 (153)
Q Consensus 100 Pt---VP~g~~RlRI~lsA~HT~edId~L~~~~L~~~ 133 (153)
.. ++.+...+||++.. ++|+|+..++ .|..+
T Consensus 410 ~~~~~~~~~~~~iRls~~~--~~e~l~~~~~-~l~~~ 443 (447)
T 3b46_A 410 YIKEHEKAAENLLRFAVCK--DDAYLENAVE-RLKLL 443 (447)
T ss_dssp SCGGGGGGGTTEEEEECCS--CHHHHHHHHH-HGGGG
T ss_pred CCCCccCCCCCEEEEEEeC--CHHHHHHHHH-HHHHH
Confidence 11 12246789999974 8999999877 66543
No 196
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=90.30 E-value=2 Score=34.41 Aligned_cols=84 Identities=10% Similarity=-0.030 Sum_probs=51.3
Q ss_pred hHHHHHHHHHHHHHHHHHHh-C-CCcccCCCCCCeE-EEEcCC----chHHHhcc-----ccccCCCC---CCCCceEEE
Q psy5049 47 IRRISVLAHNTRYFRRKLNR-L-GLIVYGHRDSPVV-PVLVFF----FSKVGQTS-----IGLGVEQT---ALNDGLSLY 111 (153)
Q Consensus 47 ~~rr~~L~~ni~~fr~~L~~-~-G~~~~~~s~SPIi-PV~~g~----~~~~~~~a-----~~i~~PtV---P~g~~RlRI 111 (153)
++.+++++++..++.+.|.+ . |+.+.. +.+..+ .+-+.+ .....+.. +.+ .|.. +.+...+||
T Consensus 293 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v-~~g~~~~~~~~~~iRi 370 (399)
T 1c7n_A 293 DGCIKVIDKNQRIVKDFFEVNHPEIKAPL-IEGTYLQWIDFRALKMDHKAMEEFMIHKAQIFF-DEGYIFGDGGIGFERI 370 (399)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCTTSBCCC-CSBSSEEEEECGGGCCCHHHHHHHHHHTTCCCC-EEGGGGCGGGTTEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCCCeEec-CCceEEEEEEcccCCCCHHHHHHHHHHhCCEEE-eCccccCCCCCCeEEE
Confidence 56677889999999999987 5 765532 444443 455542 22222211 222 2211 235678999
Q ss_pred EeeCCCCHHHHHHHHHHHHHHHHh
Q psy5049 112 ESSHLRSANLWNRPHSPSLMAVFR 135 (153)
Q Consensus 112 ~lsA~HT~edId~L~~~~L~~~~~ 135 (153)
+++.. +++|+++++ .+..+.+
T Consensus 371 s~~~~--~~~l~~~l~-~l~~~l~ 391 (399)
T 1c7n_A 371 NLAAP--SSVIQESLE-RLNKALK 391 (399)
T ss_dssp ECCSC--HHHHHHHHH-HHHHHHH
T ss_pred EeccC--HHHHHHHHH-HHHHHHH
Confidence 99865 899999888 6655443
No 197
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=90.08 E-value=2.3 Score=34.05 Aligned_cols=84 Identities=11% Similarity=-0.037 Sum_probs=50.4
Q ss_pred hHHHHHHHHHHHHHHHHHHh-C-CCcccCCCCCCeE-EEEcCC----chHHHhcc----ccccCCCC---CCCCceEEEE
Q psy5049 47 IRRISVLAHNTRYFRRKLNR-L-GLIVYGHRDSPVV-PVLVFF----FSKVGQTS----IGLGVEQT---ALNDGLSLYE 112 (153)
Q Consensus 47 ~~rr~~L~~ni~~fr~~L~~-~-G~~~~~~s~SPIi-PV~~g~----~~~~~~~a----~~i~~PtV---P~g~~RlRI~ 112 (153)
++.+++++++..++.+.|.+ . |+.+.. +.++.+ .+-+.+ ........ .....|.. +.+...+||+
T Consensus 289 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~~Ris 367 (390)
T 1d2f_A 289 DALRIYLKDNLTYIADKMNAAFPELNWQI-PQSTYLAWLDLRPLNIDDNALQKALIEQEKVAIMPGYTYGEEGRGFVRLN 367 (390)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCSSCCCCC-CSBCSEEEEECGGGCCCHHHHHHHHHHTTCEECEEGGGGCGGGTTEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCCCEEec-CCccEEEEEEccccCCCHHHHHHHHHHHcCEEeeCccccCCCCCCeEEEE
Confidence 56778889999999999987 4 766533 444443 455532 22222211 11111211 2346789999
Q ss_pred eeCCCCHHHHHHHHHHHHHHHH
Q psy5049 113 SSHLRSANLWNRPHSPSLMAVF 134 (153)
Q Consensus 113 lsA~HT~edId~L~~~~L~~~~ 134 (153)
++. ++++++..++ .++.+.
T Consensus 368 ~~~--~~~~l~~~l~-~l~~~l 386 (390)
T 1d2f_A 368 AGC--PRSKLEKGVA-GLINAI 386 (390)
T ss_dssp CCS--CHHHHHHHHH-HHHHHH
T ss_pred ecC--CHHHHHHHHH-HHHHHH
Confidence 987 5889999887 665443
No 198
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=89.91 E-value=2.3 Score=34.74 Aligned_cols=85 Identities=11% Similarity=-0.022 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHHHHHHHHh----C-CCcccCCCCCCeEEEEcCC--chHHHhcc----c-----cccCCC-CCCCCceEE
Q psy5049 48 RRISVLAHNTRYFRRKLNR----L-GLIVYGHRDSPVVPVLVFF--FSKVGQTS----I-----GLGVEQ-TALNDGLSL 110 (153)
Q Consensus 48 ~rr~~L~~ni~~fr~~L~~----~-G~~~~~~s~SPIiPV~~g~--~~~~~~~a----~-----~i~~Pt-VP~g~~RlR 110 (153)
+.++.++++..++.+.|.+ . ++.+.....+..+.+-+.+ .....+.. + ...|+. .+.+...+|
T Consensus 316 ~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~l~~~gv~v~~~g~~~~~~~~~~~~~~R 395 (427)
T 3ppl_A 316 KHAASLAPKFNKVLEILDSRLAEYGVAQWTVPAGGYFISLDVVPGTASRVAELAKEAGIALTGAGSSYPLRQDPENKNLR 395 (427)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTCCEECCCSBSSCEEEECSTTCHHHHHHHHHHTTEECCCTTTTSGGGCCTTSCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCceEEeCCCccEEEEEECCcchHHHHHHHHHHCCCEEecCcCcCCCCCCCCCCeEE
Confidence 4455566666666666643 2 3433222334556666653 22332222 1 222332 234678999
Q ss_pred EEeeCCCCHHHHHHHHHHHHHHHH
Q psy5049 111 YESSHLRSANLWNRPHSPSLMAVF 134 (153)
Q Consensus 111 I~lsA~HT~edId~L~~~~L~~~~ 134 (153)
|++.. .|+++|+..++ .|..+.
T Consensus 396 is~~~-~~~~~i~~~~~-~l~~~l 417 (427)
T 3ppl_A 396 LAPSL-PPVEELEVAMD-GVATCV 417 (427)
T ss_dssp ECCSS-SCHHHHHHHHH-HHHHHH
T ss_pred EECCC-CCHHHHHHHHH-HHHHHH
Confidence 99954 49999999888 776554
No 199
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=89.55 E-value=0.51 Score=40.27 Aligned_cols=49 Identities=8% Similarity=-0.051 Sum_probs=41.9
Q ss_pred cchHHHHHHHHHHHHHHHHHHhCCCcccCCCCCC-----eEEEEcCCchHHHhcc
Q psy5049 45 SGIRRISVLAHNTRYFRRKLNRLGLIVYGHRDSP-----VVPVLVFFFSKVGQTS 94 (153)
Q Consensus 45 ~~~~rr~~L~~ni~~fr~~L~~~G~~~~~~s~SP-----IiPV~~g~~~~~~~~a 94 (153)
..+.+++++++|+.++.+.|.+.|+.+. .+.++ |++|.+++++++.+++
T Consensus 296 ~~~~r~~~~~~~a~~la~~L~~~g~~V~-p~~~~~~~~li~~~~l~~~~~~~~f~ 349 (427)
T 3hvy_A 296 MAPHVTIEAVKGAVFCARIMELAGFDVL-PKYNDKRTDIIQAIKFNDEKKLIDFI 349 (427)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCEEE-SCTTSCCSSSEEEEECSSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCeec-CCCCCCCceEEEEEeCCCHHHHHHHH
Confidence 3478999999999999999999999874 34666 9999999988887776
No 200
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=89.51 E-value=0.73 Score=37.80 Aligned_cols=80 Identities=5% Similarity=-0.081 Sum_probs=47.9
Q ss_pred hHHHHHHHHHHHHHHHHHHhC-CCcccCCCCC-------------CeEEEEcCCchHHHhcc--------ccccCCCCCC
Q psy5049 47 IRRISVLAHNTRYFRRKLNRL-GLIVYGHRDS-------------PVVPVLVFFFSKVGQTS--------IGLGVEQTAL 104 (153)
Q Consensus 47 ~~rr~~L~~ni~~fr~~L~~~-G~~~~~~s~S-------------PIiPV~~g~~~~~~~~a--------~~i~~PtVP~ 104 (153)
.+.++.++++..++.+.|++. |+.+.....+ ..+-+-+.+.+.+.... .+..|..
T Consensus 281 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~~~~~f~~~~~~~~g~~~~~~~~~~~~~~~~l~~~gV~v~pg~~fg~--- 357 (391)
T 3bwn_A 281 KYGREMMKNRWEKLREVVKESDAFTLPKYPEAFCNYFGKSLESYPAFAWLGTKEETDLVSELRRHKVMSRAGERCGS--- 357 (391)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCSSEECCCCCCEEETTTTEEECCCCSEEEEEESSSCCHHHHHHHTTEECEEGGGGTC---
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCcccccCCccccccccccCCCcceEEEecCCcHHHHHHHHHHCCEEEccCCCCCC---
Confidence 567888999999999999987 4433211111 13333344333333222 1222211
Q ss_pred CCceEEEEeeCCCCHHHHHHHHHHHHHH
Q psy5049 105 NDGLSLYESSHLRSANLWNRPHSPSLMA 132 (153)
Q Consensus 105 g~~RlRI~lsA~HT~edId~L~~~~L~~ 132 (153)
+...+||+++. ++|+++++++ .|..
T Consensus 358 ~~~~iRis~~~--~~e~i~~~~~-~L~~ 382 (391)
T 3bwn_A 358 DKKHVRVSMLS--REDVFNVFLE-RLAN 382 (391)
T ss_dssp CTTEEEEESCS--CHHHHHHHHH-HHHS
T ss_pred CCCEEEEEecC--CHHHHHHHHH-HHHH
Confidence 46789999984 8999999877 6654
No 201
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=89.50 E-value=1.3 Score=36.27 Aligned_cols=84 Identities=11% Similarity=-0.037 Sum_probs=49.6
Q ss_pred chHHHHHHHHHHHHHHHHHHhCC----CcccCCCCCCeEEEEcCCc-------------hHHHhcc-----ccc-cCCCC
Q psy5049 46 GIRRISVLAHNTRYFRRKLNRLG----LIVYGHRDSPVVPVLVFFF-------------SKVGQTS-----IGL-GVEQT 102 (153)
Q Consensus 46 ~~~rr~~L~~ni~~fr~~L~~~G----~~~~~~s~SPIiPV~~g~~-------------~~~~~~a-----~~i-~~PtV 102 (153)
.++.+++++++..++++.|.+.+ +.....+...++.+.+.+. ..+..+. ..+ ..|.
T Consensus 319 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gi~v~~~- 397 (427)
T 3fq8_A 319 QPGTYEYLDQITKRLSDGLLAIAQETGHAACGGQVSGMFGFFFTEGPVHNYEDAKKSDLQKFSRFHRGMLEQGIYLAPS- 397 (427)
T ss_dssp STTHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEEEEESSSCCCCSHHHHTTSCHHHHHHHHHHHHHTTEECCSS-
T ss_pred hcCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeeeEEEEEEecCccccccccccccHHHHHHHHHHHHHCCcEEecC-
Confidence 46789999999999999998642 2111112234554444321 1111221 222 2222
Q ss_pred CCCCceEEEEeeCCCCHHHHHHHHHHHHHHHHh
Q psy5049 103 ALNDGLSLYESSHLRSANLWNRPHSPSLMAVFR 135 (153)
Q Consensus 103 P~g~~RlRI~lsA~HT~edId~L~~~~L~~~~~ 135 (153)
+.. |++++..+|+||++++++ +|+.+.+
T Consensus 398 --~~~--r~~~~~~~t~e~i~~~l~-~l~~~l~ 425 (427)
T 3fq8_A 398 --QFE--AGFTSLAHTEEDIDATLA-AARTVMS 425 (427)
T ss_dssp --TTS--CEECCTTCCHHHHHHHHH-HHHHHHH
T ss_pred --CCC--CEEeeCcCCHHHHHHHHH-HHHHHHH
Confidence 222 677889999999999998 7776543
No 202
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=89.28 E-value=0.73 Score=38.24 Aligned_cols=89 Identities=10% Similarity=-0.072 Sum_probs=56.4
Q ss_pred chHHHHHHHHHHHHHHHHHHhCC---------------CcccC---CCCCCeEEEEcCCc-hHHHhcc----c-------
Q psy5049 46 GIRRISVLAHNTRYFRRKLNRLG---------------LIVYG---HRDSPVVPVLVFFF-SKVGQTS----I------- 95 (153)
Q Consensus 46 ~~~rr~~L~~ni~~fr~~L~~~G---------------~~~~~---~s~SPIiPV~~g~~-~~~~~~a----~------- 95 (153)
.+.+.+++.+|+..+.+.+.+.. +.+.. .+.++++.+.+.+. +.+.++. .
T Consensus 263 l~~r~~~~~~n~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~l~~~~i~~~~~s~ 342 (403)
T 3cog_A 263 LHVRMEKHFKNGMAVAQFLESNPWVEKVIYPGLPSHPQHELVKRQCTGCTGMVTFYIKGTLQHAEIFLKNLKLFTLAESL 342 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEESSCHHHHHHHHHHCSSSEECSCC
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCEEEEECCCCCCCCcHHHHHhcCCCCceEEEEEecCCHHHHHHHHHhCCcceEccCC
Confidence 35577888888888888877651 11100 12367888877543 3333332 1
Q ss_pred -----cccCCC------CC--------CCCceEEEEeeCCCCHHHHHHHHHHHHHHHHh
Q psy5049 96 -----GLGVEQ------TA--------LNDGLSLYESSHLRSANLWNRPHSPSLMAVFR 135 (153)
Q Consensus 96 -----~i~~Pt------VP--------~g~~RlRI~lsA~HT~edId~L~~~~L~~~~~ 135 (153)
.+.+|+ +| .+.+.+|+++...+++++|+.+.+ +|+.+.+
T Consensus 343 G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlSvg~e~~~d~i~~l~~-al~~~~~ 400 (403)
T 3cog_A 343 GGFESLAELPAIMTHASVLKNDRDVLGISDTLIRLSVGLEDEEDLLEDLDQ-ALKAAHP 400 (403)
T ss_dssp SSSSCEEECTTTTTTTTSCHHHHHHHTCCTTEEEEECCSSCHHHHHHHHHH-HHHHHCC
T ss_pred CCcceeeecccccccccCCHHHHHhcCCCcCeEEEEeCCCCHHHHHHHHHH-HHHHhhc
Confidence 123442 22 126799999999999999999988 7776544
No 203
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=88.75 E-value=0.7 Score=37.32 Aligned_cols=77 Identities=5% Similarity=-0.109 Sum_probs=45.7
Q ss_pred chHHHHHHHHHHHHHHHHHHhCC----CcccCCCCCCeEEEEcCCc-hHHHhcc---ccccCCCCCCCCceEEEEeeCCC
Q psy5049 46 GIRRISVLAHNTRYFRRKLNRLG----LIVYGHRDSPVVPVLVFFF-SKVGQTS---IGLGVEQTALNDGLSLYESSHLR 117 (153)
Q Consensus 46 ~~~rr~~L~~ni~~fr~~L~~~G----~~~~~~s~SPIiPV~~g~~-~~~~~~a---~~i~~PtVP~g~~RlRI~lsA~H 117 (153)
..+.+++++++..++.+.|.+.| +.+. .+....+ ++++-+ +.+..+. .....| .+||++++ +
T Consensus 315 ~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~ll~~~gi~v~~-------~~Ris~~~-~ 384 (401)
T 7aat_A 315 VKGMADRIISMRTQLVSNLKKEGSSHNWQHI-TDQIGMF-CFTGLKPEQVERLTKEFSIYMTK-------DGRISVAG-V 384 (401)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCSCCHHH-HHCCSSE-EECCCCHHHHHHHHHHHCEECCT-------TCEEEGGG-C
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCcee-cCCcceE-EecCCCHHHHHHHHHhCCEeccC-------CCeEEecc-C
Confidence 35667889999999999999886 3321 1223332 333332 3333332 122222 26999976 5
Q ss_pred CHHHHHHHHHHHHHHH
Q psy5049 118 SANLWNRPHSPSLMAV 133 (153)
Q Consensus 118 T~edId~L~~~~L~~~ 133 (153)
|++||+++++ +++.+
T Consensus 385 ~~~~i~~~~~-~l~~~ 399 (401)
T 7aat_A 385 ASSNVGYLAH-AIHQV 399 (401)
T ss_dssp CTTTHHHHHH-HHHHH
T ss_pred ChhhHHHHHH-HHHHH
Confidence 5556999988 77654
No 204
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=88.64 E-value=1.6 Score=35.78 Aligned_cols=88 Identities=8% Similarity=-0.076 Sum_probs=53.8
Q ss_pred cchHHHHHHHHHHHHHHHHHHhCC---CcccCC---CCCC-eEEEEcCC---chHHHhcc------ccccCC-CCCC---
Q psy5049 45 SGIRRISVLAHNTRYFRRKLNRLG---LIVYGH---RDSP-VVPVLVFF---FSKVGQTS------IGLGVE-QTAL--- 104 (153)
Q Consensus 45 ~~~~rr~~L~~ni~~fr~~L~~~G---~~~~~~---s~SP-IiPV~~g~---~~~~~~~a------~~i~~P-tVP~--- 104 (153)
.-+++.++.++|..++.+.|.+.+ ...... ...+ .+++.+.+ .+...+.. ..+.|| .+..
T Consensus 249 ~l~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gI~~~~~~~~~~~~~~~ 328 (377)
T 3ju7_A 249 KWDDKLKERTRISEWYKQLLQSNGLMKKGWQLQKTEAVIQQFMPILCPEEVRNKQVIEDLKKQKIEARLYFSPSCHQQVL 328 (377)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHTTTTTTTCBCCCCSCBCCSSEEEECCTTSCHHHHHHHHHTTTBCCBCTTSSCGGGSGG
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCccccccCCCCCcceEEEEEEEeCChhhHHHHHHHHHHCCCceecccCCccccchh
Confidence 346777888899999999999876 222111 1122 45777664 23333322 222332 1111
Q ss_pred ---------------CCceEEEEeeCCCCHHHHHHHHHHHHHHH
Q psy5049 105 ---------------NDGLSLYESSHLRSANLWNRPHSPSLMAV 133 (153)
Q Consensus 105 ---------------g~~RlRI~lsA~HT~edId~L~~~~L~~~ 133 (153)
....+|+.++...|+||++++++ +++.+
T Consensus 329 ~~~~~~~~~p~~~~~~~~~l~lp~~~~~t~~di~~v~~-~l~~~ 371 (377)
T 3ju7_A 329 FRNYKSTDLTRTNKIAKRIVSLPLWEGMTKEIVEQIVI-CLGQK 371 (377)
T ss_dssp GTTSCBSCCHHHHHHHHHEEEECCCTTCCHHHHHHHHH-HHTC-
T ss_pred hhcCCCCCCHHHHHHHhCEEECCCCCCCCHHHHHHHHH-HHHHH
Confidence 14579999999999999999888 66543
No 205
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=88.51 E-value=1.4 Score=36.59 Aligned_cols=81 Identities=7% Similarity=-0.151 Sum_probs=49.5
Q ss_pred hHHHHHHHHHHHHHHHHHHhC-CCcccC------------------CCCCCeEEEEcCCc-hHHHhcc------------
Q psy5049 47 IRRISVLAHNTRYFRRKLNRL-GLIVYG------------------HRDSPVVPVLVFFF-SKVGQTS------------ 94 (153)
Q Consensus 47 ~~rr~~L~~ni~~fr~~L~~~-G~~~~~------------------~s~SPIiPV~~g~~-~~~~~~a------------ 94 (153)
.++.+++.+|..++.+.|.+. ++.... .+.++|+++.+.+. +.+..+.
T Consensus 288 ~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~~~~~~~~~~~~~~~~~~~g~ivsf~l~~~~~~~~~~~~~l~~~~~~~~~ 367 (421)
T 2ctz_A 288 SLRAERHVENTLHLAHWLLEQPQVAWVNYPGLPHHPHHDRAQKYFKGKPGAVLTFGLKGGYEAAKRFISRLKLISHLANV 367 (421)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTCTTHHHHHHHHTTCCCSEEEEEETTHHHHHHHHHHTCSSSEECSCC
T ss_pred HHHHHHHHHhHHHHHHHHHhCCCeeEEECCCCCCCCCHHHHHHhccCCCceEEEEEeCCCHHHHHHHHHhCCcceecccC
Confidence 456788889999999999875 332211 23478999998763 3333322
Q ss_pred ----ccccCCCCCC--------------CCceEEEEeeCCCCHHHHHHHHH
Q psy5049 95 ----IGLGVEQTAL--------------NDGLSLYESSHLRSANLWNRPHS 127 (153)
Q Consensus 95 ----~~i~~PtVP~--------------g~~RlRI~lsA~HT~edId~L~~ 127 (153)
..+.+|+.+. ..+.+|++++..+.++.|+.+.+
T Consensus 368 G~~~sl~~~~~~~~h~~~~~~~~~~~g~~~~~vRlS~g~e~~~~li~~l~~ 418 (421)
T 2ctz_A 368 GDTRTLAIHPASTTHSQLSPEEQAQAGVSPEMVRLSVGLEHVEDLKAELKE 418 (421)
T ss_dssp CCSSCEEECGGGTTTTTSCHHHHHHHTCCTTEEEEECCSSCHHHHHHHHHH
T ss_pred CCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEeCCCCHHHHHHHHHH
Confidence 1223443221 24899999987655555555443
No 206
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=87.84 E-value=0.85 Score=37.39 Aligned_cols=76 Identities=7% Similarity=-0.095 Sum_probs=47.3
Q ss_pred hHHHHHHHHHHHHHHHHHHhC----CCcccCCCCCCeEEEEcC-CchHHHhcc---ccccCCCCCCCCceEEEEeeCCCC
Q psy5049 47 IRRISVLAHNTRYFRRKLNRL----GLIVYGHRDSPVVPVLVF-FFSKVGQTS---IGLGVEQTALNDGLSLYESSHLRS 118 (153)
Q Consensus 47 ~~rr~~L~~ni~~fr~~L~~~----G~~~~~~s~SPIiPV~~g-~~~~~~~~a---~~i~~PtVP~g~~RlRI~lsA~HT 118 (153)
++.+++++++..++.+.|++. |+.... +....+ ++++ +.+.+.... .....|. .|+++. .+|
T Consensus 335 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~~~g~~-~~~~~~~~~~~~~l~~~gI~v~~~-------~Ris~~-~~~ 404 (420)
T 4f4e_A 335 GEMRDRIRAMRNGLVERLKAAGIERDFSFIN-AQRGMF-SYSGLTSAQVDRLREEFGIYAVST-------GRICVA-ALN 404 (420)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCSSCCTHHH-HSCSSE-EECCCCHHHHHHHHHHHCEECCTT-------SEEEGG-GCC
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCceeEC-CCccEE-EEeCCCHHHHHHHHHhCCEEecCC-------CeEEEe-cCC
Confidence 677889999999999999987 554422 223332 3333 333333332 2223332 288884 568
Q ss_pred HHHHHHHHHHHHHHH
Q psy5049 119 ANLWNRPHSPSLMAV 133 (153)
Q Consensus 119 ~edId~L~~~~L~~~ 133 (153)
+++|+++++ +|+.+
T Consensus 405 ~~~i~~~~~-~l~~~ 418 (420)
T 4f4e_A 405 TRNLDVVAN-AIAAV 418 (420)
T ss_dssp TTTHHHHHH-HHHHH
T ss_pred HHHHHHHHH-HHHHH
Confidence 889999888 77654
No 207
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=87.70 E-value=0.51 Score=37.97 Aligned_cols=77 Identities=10% Similarity=-0.108 Sum_probs=47.5
Q ss_pred chHHHHHHHHHHHHHHHHHHhCC----CcccCCCCCCeEEEEcCCc-hHHHhcc---ccccCCCCCCCCceEEEEeeCCC
Q psy5049 46 GIRRISVLAHNTRYFRRKLNRLG----LIVYGHRDSPVVPVLVFFF-SKVGQTS---IGLGVEQTALNDGLSLYESSHLR 117 (153)
Q Consensus 46 ~~~rr~~L~~ni~~fr~~L~~~G----~~~~~~s~SPIiPV~~g~~-~~~~~~a---~~i~~PtVP~g~~RlRI~lsA~H 117 (153)
.++.+++++++..++.+.|.+.| +.+.. +....+ +++.-+ +.+.... .....|. +||+++ .+
T Consensus 308 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~~~g~~-~~~~~~~~~~~~~l~~~gi~v~~~-------~Ris~~-~~ 377 (394)
T 2ay1_A 308 LEAVRSGMLRLREQLAGELRDLSGSDRFGFVA-EHRGMF-SRLGATPEQVKRIKEEFGIYMVGD-------SRINIA-GL 377 (394)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTSSTTTHHH-HCCSSE-EECCCCHHHHHHHHHHHCEECCTT-------CEEEGG-GC
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCeeEEc-CCceEE-EeeCCCHHHHHHHHHhCCEEecCC-------CeEEee-cC
Confidence 35678888899999999998775 44322 222333 344333 2232222 2223332 699988 58
Q ss_pred CHHHHHHHHHHHHHHH
Q psy5049 118 SANLWNRPHSPSLMAV 133 (153)
Q Consensus 118 T~edId~L~~~~L~~~ 133 (153)
|++|++++++ +++.+
T Consensus 378 ~~~~i~~~~~-~l~~~ 392 (394)
T 2ay1_A 378 NDNTIPILAR-AIIEV 392 (394)
T ss_dssp CTTTHHHHHH-HHHHH
T ss_pred CHhhHHHHHH-HHHHc
Confidence 9999999888 76654
No 208
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=87.46 E-value=0.74 Score=37.30 Aligned_cols=78 Identities=6% Similarity=-0.093 Sum_probs=49.0
Q ss_pred hHHHHHHHHHHHHHHHHHHhCC----CcccCCCCCCeEEEEcCCc-hHHHhcc---ccccCCCCCCCCceEEEEeeCCCC
Q psy5049 47 IRRISVLAHNTRYFRRKLNRLG----LIVYGHRDSPVVPVLVFFF-SKVGQTS---IGLGVEQTALNDGLSLYESSHLRS 118 (153)
Q Consensus 47 ~~rr~~L~~ni~~fr~~L~~~G----~~~~~~s~SPIiPV~~g~~-~~~~~~a---~~i~~PtVP~g~~RlRI~lsA~HT 118 (153)
++.+++++++..++.+.|.+.| +.+.. +....+ ++++-+ +.+.... .....|. +||+++. +|
T Consensus 324 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~l~~~gv~v~~~-------~Ris~~~-~~ 393 (412)
T 1ajs_A 324 KTMADRILSMRSELRARLEALKTPGTWNHIT-DQIGMF-SFTGLNPKQVEYLINQKHIYLLPS-------GRINMCG-LT 393 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCSSCCHHHH-HCCSSE-EECCCCHHHHHHHHHTTCEECCTT-------SEEEGGG-CC
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCCCCeeEEc-CCCceE-EEeCCCHHHHHHHHHhCCEEecCC-------cEEEeee-CC
Confidence 5678899999999999999887 54322 223333 233322 2222222 2223332 6999884 59
Q ss_pred HHHHHHHHHHHHHHHHh
Q psy5049 119 ANLWNRPHSPSLMAVFR 135 (153)
Q Consensus 119 ~edId~L~~~~L~~~~~ 135 (153)
++|++++++ .|+.+.+
T Consensus 394 ~~~i~~~~~-~l~~~l~ 409 (412)
T 1ajs_A 394 TKNLDYVAT-SIHEAVT 409 (412)
T ss_dssp TTTHHHHHH-HHHHHHH
T ss_pred HHHHHHHHH-HHHHHHH
Confidence 999999998 7776543
No 209
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=87.16 E-value=2.2 Score=35.58 Aligned_cols=81 Identities=11% Similarity=-0.017 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHHHHHHHHhC-CCcc--cC-C----------CC-CCeEEEEcCC-ch-HHHhcc--------ccccCCCC
Q psy5049 48 RRISVLAHNTRYFRRKLNRL-GLIV--YG-H----------RD-SPVVPVLVFF-FS-KVGQTS--------IGLGVEQT 102 (153)
Q Consensus 48 ~rr~~L~~ni~~fr~~L~~~-G~~~--~~-~----------s~-SPIiPV~~g~-~~-~~~~~a--------~~i~~PtV 102 (153)
+.+++++++..++.+.|++. |+.+ .. . ++ +..+-+-+.. .. .+..+. .+..|+.
T Consensus 317 ~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~p~~g~f~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~- 395 (427)
T 2hox_A 317 FGFKKLRERWVNITALLDQSDRFSYQELPQSEYCNYFRRMRPPSPSYAWVKCEWEEDKDCYQTFQNGRINTQNGVGFEA- 395 (427)
T ss_dssp HHHHHHHHHHHHHHHHHTTSSSEECCCCCSCEEETTTTEEECCCCSEEEEEECSGGGCSHHHHHHHTTEECEEGGGGTS-
T ss_pred HHHHHHHHHHHHHHHHHHhCcCccccccccccccccccccCCCCceEEEEECCCcHHHHHHHHHHHCCEEEcCCCccCC-
Confidence 46788999999999999987 6543 11 0 11 2333333432 11 111111 3334543
Q ss_pred CCCCceEEEEeeCCCCHHHHHHHHHHHHHHHH
Q psy5049 103 ALNDGLSLYESSHLRSANLWNRPHSPSLMAVF 134 (153)
Q Consensus 103 P~g~~RlRI~lsA~HT~edId~L~~~~L~~~~ 134 (153)
+...+||++.. ++++|+..++ .|..+.
T Consensus 396 --~~~~~Ris~~~--~~e~l~~~l~-~l~~~~ 422 (427)
T 2hox_A 396 --SSRYVRLSLIK--TQDDFDQLMY-YLKDMV 422 (427)
T ss_dssp --CTTEEEEECSS--CHHHHHHHHH-HHHHHH
T ss_pred --CCCEEEEEecC--CHHHHHHHHH-HHHHHH
Confidence 56889999985 8999999887 666554
No 210
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=86.45 E-value=0.62 Score=37.40 Aligned_cols=75 Identities=8% Similarity=0.003 Sum_probs=47.0
Q ss_pred hHHHHHHHHHHHHHHHHHHhCC----CcccCCCCCCeEEEEcCCc-hHHHhcc---ccccCCCCCCCCceEEEEeeCCCC
Q psy5049 47 IRRISVLAHNTRYFRRKLNRLG----LIVYGHRDSPVVPVLVFFF-SKVGQTS---IGLGVEQTALNDGLSLYESSHLRS 118 (153)
Q Consensus 47 ~~rr~~L~~ni~~fr~~L~~~G----~~~~~~s~SPIiPV~~g~~-~~~~~~a---~~i~~PtVP~g~~RlRI~lsA~HT 118 (153)
++.+++++++..++.+.|++.| +.+. .+.+.++ +++.-+ +.+.... .....| .+||+++. .|
T Consensus 312 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~l~~~gv~v~~-------~~Ris~~~-~~ 381 (396)
T 2q7w_A 312 TDMRQRIQRMRQLFVNTLQEKGANRDFSFI-IKQNGMF-SFSGLTKEQVLRLREEFGVYAVA-------SGRVNVAG-MT 381 (396)
T ss_dssp HHC-CHHHHHHHHHHHHHHHTTCCSCCTHH-HHCCSSE-EECCCCHHHHHHHHHHHCEECCT-------TCEEEGGG-CC
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCccee-cCCCceE-EEecCCHHHHHHHHHhcCeeecC-------CceEEEee-cC
Confidence 4567888999999999999887 5432 2334444 444433 2222222 222333 26999985 49
Q ss_pred HHHHHHHHHHHHHH
Q psy5049 119 ANLWNRPHSPSLMA 132 (153)
Q Consensus 119 ~edId~L~~~~L~~ 132 (153)
+||++++++ +|+.
T Consensus 382 ~e~i~~~~~-~l~~ 394 (396)
T 2q7w_A 382 PDNMAPLCE-AIVA 394 (396)
T ss_dssp TTTHHHHHH-HHHH
T ss_pred HHHHHHHHH-HHHh
Confidence 999999888 6654
No 211
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=86.25 E-value=3.2 Score=34.76 Aligned_cols=85 Identities=7% Similarity=-0.091 Sum_probs=56.1
Q ss_pred chHHHHHHHHHHHHHHHHHHhCCC-c-c-c-C--------------CCCCCeEEEEcCC---chHHHhcc----------
Q psy5049 46 GIRRISVLAHNTRYFRRKLNRLGL-I-V-Y-G--------------HRDSPVVPVLVFF---FSKVGQTS---------- 94 (153)
Q Consensus 46 ~~~rr~~L~~ni~~fr~~L~~~G~-~-~-~-~--------------~s~SPIiPV~~g~---~~~~~~~a---------- 94 (153)
.+.+.++..+|+.++.+.|.+... . + . + .+..+|+++.+.+ .+.+..+.
T Consensus 279 l~~r~~~~~~n~~~l~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~~~g~i~sf~l~g~~~~~~~~~~l~~l~~~~~a~ 358 (415)
T 2fq6_A 279 LGVRLRQHHESSLKVAEWLAEHPQVARVNHPALPGSKGHEFWKRDFTGSSGLFSFVLKKKLNNEELANYLDNFSLFSMAY 358 (415)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEESSCCCHHHHHHHHTTCSSCEECS
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECCCCCHHHHHHHHHhCCcCeEec
Confidence 366788889999999999987531 0 0 0 0 0246899999975 34444432
Q ss_pred ------ccccC--CCCC--------C--CCceEEEEeeCCCCHHHHHHHHHHHHH
Q psy5049 95 ------IGLGV--EQTA--------L--NDGLSLYESSHLRSANLWNRPHSPSLM 131 (153)
Q Consensus 95 ------~~i~~--PtVP--------~--g~~RlRI~lsA~HT~edId~L~~~~L~ 131 (153)
..+.. |+.+ . ..+.+|+++...+++++|+.+.+ +|+
T Consensus 359 s~G~~~s~~~~~~p~~~s~~~~~~~~g~~~~~iRlS~G~e~~~d~i~~l~~-al~ 412 (415)
T 2fq6_A 359 SWGGYESLILANQPEHIAAIRPQGEIDFSGTLIRLHIGLEDVDDLIADLDA-GFA 412 (415)
T ss_dssp CCCSSSCEEEEECHHHHHTTCTTCCCCCCSCEEEEECCSSCHHHHHHHHHH-HHH
T ss_pred cCCCCceeEEecCCCccccccchhhcCCCCCEEEEEecCCCHHHHHHHHHH-HHH
Confidence 11122 3111 2 24789999999999999999888 665
No 212
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=85.25 E-value=4 Score=33.43 Aligned_cols=83 Identities=17% Similarity=0.072 Sum_probs=53.5
Q ss_pred hHHHHHHHHHHHHHHHHHHhCCCc--cc--C--------------CCCCCeEEEEcCCc-hHHHhcc-------------
Q psy5049 47 IRRISVLAHNTRYFRRKLNRLGLI--VY--G--------------HRDSPVVPVLVFFF-SKVGQTS------------- 94 (153)
Q Consensus 47 ~~rr~~L~~ni~~fr~~L~~~G~~--~~--~--------------~s~SPIiPV~~g~~-~~~~~~a------------- 94 (153)
..+.+++.+|..++.+.|.+.... +. + .+...++.+-+.++ ..+..+.
T Consensus 263 ~~~~~~~~~~~~~l~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~~l~~~~~~~s~G 342 (392)
T 3qhx_A 263 VLRMQRHSENAAAVAEFLAEHPAISTVLYPGLPSHPGHAVAARQMRGFGGMVSVRMRAGRTAAEQLCAKTNIFILAESLG 342 (392)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTCHHHHHHHHHHCSSSEECSCCC
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCcceEECCCCCCCCCHHHHHHhCCCCceEEEEEeCCcHHHHHHHHHhCCCceECCCCC
Confidence 567888999999999999865321 10 0 01145888888652 3333321
Q ss_pred ---ccccCCCCC-----------CCCceEEEEeeCCCCHHHHHHHHHHHH
Q psy5049 95 ---IGLGVEQTA-----------LNDGLSLYESSHLRSANLWNRPHSPSL 130 (153)
Q Consensus 95 ---~~i~~PtVP-----------~g~~RlRI~lsA~HT~edId~L~~~~L 130 (153)
..+.+|.+. ...+.+|++++..+++++|+.+.+ +|
T Consensus 343 ~~~sl~~~~~~~~~~~~~~~~~g~~~~~iRlSvg~e~~~~~i~~l~~-al 391 (392)
T 3qhx_A 343 SVESLIEHPSAMTHASTAGSQLEVPDDLVRLSVGIEDVADLLDDLKQ-AL 391 (392)
T ss_dssp CSSCEEECGGGTSCGGGBTTBCCCCTTEEEEECCSSCHHHHHHHHHH-HH
T ss_pred CCCceeeCcccccccccCHHHcCCCCCeEEEEeccCCHHHHHHHHHH-Hh
Confidence 122344322 346789999999999999999877 54
No 213
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=85.21 E-value=1.3 Score=37.20 Aligned_cols=79 Identities=13% Similarity=-0.058 Sum_probs=50.0
Q ss_pred HHHHHHHHHHHHHHHHHhCCCcccCCCCCCeEEEEcC--CchHHHhcc----ccccCCCCCCCCceEEEEeeCCCCHHHH
Q psy5049 49 RISVLAHNTRYFRRKLNRLGLIVYGHRDSPVVPVLVF--FFSKVGQTS----IGLGVEQTALNDGLSLYESSHLRSANLW 122 (153)
Q Consensus 49 rr~~L~~ni~~fr~~L~~~G~~~~~~s~SPIiPV~~g--~~~~~~~~a----~~i~~PtVP~g~~RlRI~lsA~HT~edI 122 (153)
..++..++..++++. |+.+.+..+...+.+.+. +.....+.. ..+..+ |...+|++++..+|++|+
T Consensus 269 ~~~~~~~l~~~l~~~----g~~~~~~~~~~~l~i~~~~~~~~~l~~~L~~~GI~v~~~----g~~~iRi~~~~~~t~e~i 340 (446)
T 2x3l_A 269 FFAKRAQLIECLENK----GFEMLQVDDPLKLLIKYEGFTGHDIQNWFMNAHIYLELA----DDYQALAILPLWHHDDTY 340 (446)
T ss_dssp HHHHHHHHHHHHHHH----TCEEEECSSTTEEEEECTTSCHHHHHHHHHHTTEEESEE----CSSCEEEECCCCCTTCCC
T ss_pred HHHHHHHHHHHHHHc----CCEECcCCCCeEEEEEeCCcCHHHHHHHHHHCCCEEEec----CCCEEEEEeecCCCHHHH
Confidence 666777777777666 776643222224555553 122333222 333323 457899999999999999
Q ss_pred HHHHHHHHHHHHhcC
Q psy5049 123 NRPHSPSLMAVFRGG 137 (153)
Q Consensus 123 d~L~~~~L~~~~~~~ 137 (153)
++++ +|+.+.+..
T Consensus 341 -~l~~-aL~~~~~~~ 353 (446)
T 2x3l_A 341 -LFDS-LLRKIEDMI 353 (446)
T ss_dssp -CHHH-HHHHHHTCC
T ss_pred -HHHH-HHHHHHHhh
Confidence 9999 888877654
No 214
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=83.57 E-value=3.4 Score=33.72 Aligned_cols=84 Identities=7% Similarity=-0.033 Sum_probs=54.1
Q ss_pred hHHHHHHHHHHHHHHHHHHhCCC---------ccc---------CCCCCCeEEEEcCCchHHHhcc-------cc-----
Q psy5049 47 IRRISVLAHNTRYFRRKLNRLGL---------IVY---------GHRDSPVVPVLVFFFSKVGQTS-------IG----- 96 (153)
Q Consensus 47 ~~rr~~L~~ni~~fr~~L~~~G~---------~~~---------~~s~SPIiPV~~g~~~~~~~~a-------~~----- 96 (153)
+.+.++..+|...+.+.|.+.+. .-. ..+..+++.+.+.+.+.+..+. .+
T Consensus 256 ~~r~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~~~~~~~~~~~~g~g~~~~~~l~~~~~~~~~l~~~~i~~~~~s~G~ 335 (389)
T 3acz_A 256 PIRMQIHMENGLKVAKFLEQHEKIVKVNHPGLESFPGHDIAKKQMTGYGSTFLFEMKSFEAAKKLMEHLKVCTLAVSLGC 335 (389)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESSHHHHHHHHTTCSSSEEBSCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCeEEEEEECCHHHHHHHHHhCCCcEECcCCCC
Confidence 56778888999999999987531 100 0123678888886544444332 11
Q ss_pred ----ccCCCCCC------------C--CceEEEEeeCCCCHHHHHHHHHHHHH
Q psy5049 97 ----LGVEQTAL------------N--DGLSLYESSHLRSANLWNRPHSPSLM 131 (153)
Q Consensus 97 ----i~~PtVP~------------g--~~RlRI~lsA~HT~edId~L~~~~L~ 131 (153)
+.+|+.+. | ...+|+++...++++.|+.+.+ +|+
T Consensus 336 ~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRlsvg~~~~~~li~~l~~-al~ 387 (389)
T 3acz_A 336 VDTLIEHPASMTHAAVPENIMRKQGITPELVRISVGIENVDDIIADLKQ-ALE 387 (389)
T ss_dssp SSCEEECTTTTTTSSSCHHHHHHHTCCTTEEEEECCSSCHHHHHHHHHH-HHT
T ss_pred cccEeeCCcccccccCCHHHHHhcCCCcCeEEEEeccCCHHHHHHHHHH-HHh
Confidence 14454332 1 5799999999998888888776 553
No 215
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=82.21 E-value=3.3 Score=37.81 Aligned_cols=31 Identities=16% Similarity=0.103 Sum_probs=27.8
Q ss_pred CCceEEEEeeCCCCHHHHHHHHHHHHHHHHhc
Q psy5049 105 NDGLSLYESSHLRSANLWNRPHSPSLMAVFRG 136 (153)
Q Consensus 105 g~~RlRI~lsA~HT~edId~L~~~~L~~~~~~ 136 (153)
+...+|+++|...|++++++|++ +|..+.+.
T Consensus 574 ~~~~v~~~~~~g~t~~~~~~l~~-al~~~~~~ 604 (755)
T 2vyc_A 574 TDFQIMFLFSMGVTRGKWGTLVN-TLCSFKRH 604 (755)
T ss_dssp CSSEEEEECCTTCCTTTTHHHHH-HHHHHHHH
T ss_pred CCCeEEEEECCCCCHHHHHHHHH-HHHHHHHh
Confidence 57899999999999999999999 88887654
No 216
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=80.28 E-value=3.2 Score=35.04 Aligned_cols=49 Identities=8% Similarity=-0.083 Sum_probs=40.1
Q ss_pred cchHHHHHHHHHHHHHHHHHHhCCCcccCCCCCC-----eEEEEcCCchHHHhcc
Q psy5049 45 SGIRRISVLAHNTRYFRRKLNRLGLIVYGHRDSP-----VVPVLVFFFSKVGQTS 94 (153)
Q Consensus 45 ~~~~rr~~L~~ni~~fr~~L~~~G~~~~~~s~SP-----IiPV~~g~~~~~~~~a 94 (153)
..+.+++++++|+.++.+.|++.|+.+.. +.++ |++|.+++.+++.+++
T Consensus 285 ~~~~~~~~~~~~a~~l~~~L~~~g~~v~p-~~~~~~~~li~~i~l~~~~~~~~~~ 338 (431)
T 3ht4_A 285 LAPHVAGQALKGAIFTAAFLEKLGMNTSP-AWNAPRTDLIQSVQFDDKDRMIAFC 338 (431)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCEES-CTTSCCSSSCCEEECCCHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCcCEecC-CCCCCCccEEEEEEeCCHHHHHHHH
Confidence 34778999999999999999999997743 3555 9999999887777664
No 217
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=78.43 E-value=0.51 Score=40.81 Aligned_cols=83 Identities=11% Similarity=-0.148 Sum_probs=50.4
Q ss_pred cchHHHHHHHHHHHHHHHHHHhC----CCcccCCCCCCeEEEEcCCc-------------hHHHhcc------ccccCCC
Q psy5049 45 SGIRRISVLAHNTRYFRRKLNRL----GLIVYGHRDSPVVPVLVFFF-------------SKVGQTS------IGLGVEQ 101 (153)
Q Consensus 45 ~~~~rr~~L~~ni~~fr~~L~~~----G~~~~~~s~SPIiPV~~g~~-------------~~~~~~a------~~i~~Pt 101 (153)
+.+...++++++..++++.|++. ++.....+...++.|.+.++ +....+. -.+..|.
T Consensus 353 ~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~g~G~~~~i~~~~~~~~~~~~~~~~d~~~~~~~~~~ll~~GV~v~p~ 432 (465)
T 2yky_A 353 YTRQAASDLSASGDRFRANLNRIAVENQAPLQFTGLGSLGTIHFSRAPIRSAGDVRAADQQLKELFFFHMLRKGIYLAPR 432 (465)
Confidence 34578999999999999999865 22111124467777776541 1122222 2223332
Q ss_pred CCCCCceEEEEeeCCCCHHHHHHHHHHHHHHHHh
Q psy5049 102 TALNDGLSLYESSHLRSANLWNRPHSPSLMAVFR 135 (153)
Q Consensus 102 VP~g~~RlRI~lsA~HT~edId~L~~~~L~~~~~ 135 (153)
-. +. ++..||+||||++++ +++.+.+
T Consensus 433 ~~-~~------~s~~~t~edid~~l~-~l~~~l~ 458 (465)
T 2yky_A 433 GM-YA------LSLEIADAGRDAFAE-ALADFIG 458 (465)
Confidence 11 11 667899999999888 7765543
No 218
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=76.40 E-value=3 Score=38.66 Aligned_cols=34 Identities=9% Similarity=-0.011 Sum_probs=28.7
Q ss_pred CceEEEEeeCCCCHHHHHHHHHHHHHHHHhcCCCc
Q psy5049 106 DGLSLYESSHLRSANLWNRPHSPSLMAVFRGGGPG 140 (153)
Q Consensus 106 ~~RlRI~lsA~HT~edId~L~~~~L~~~~~~~~~~ 140 (153)
..++|++.++.||++|||++++ +++.+.+..++|
T Consensus 798 g~~lrl~pp~~~t~e~id~~~~-~l~~~l~~l~~~ 831 (831)
T 4a0g_A 798 GNVIYLMCGPCTSPEICRRLLT-KLYKRLGEFNRT 831 (831)
T ss_dssp TTEEEEECCTTCCHHHHHHHHH-HHHHHHTTTCCC
T ss_pred CCEEEEECCCCCCHHHHHHHHH-HHHHHHHHhcCC
Confidence 3799999999999999999999 888777665543
No 219
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=74.49 E-value=10 Score=33.60 Aligned_cols=89 Identities=12% Similarity=-0.027 Sum_probs=60.5
Q ss_pred cccchHHHHHHHHHHHHHHHHHHhCCCccc-CCCCCCeEEEEcCCc----hHHHhcc---------ccccCCCCCCCCce
Q psy5049 43 FISGIRRISVLAHNTRYFRRKLNRLGLIVY-GHRDSPVVPVLVFFF----SKVGQTS---------IGLGVEQTALNDGL 108 (153)
Q Consensus 43 ~~~~~~rr~~L~~ni~~fr~~L~~~G~~~~-~~s~SPIiPV~~g~~----~~~~~~a---------~~i~~PtVP~g~~R 108 (153)
..+..+..++..+|++.|.+.|.+.||.+. |.++++.+=|=+.+. .++.... +.+-+-.-|..++.
T Consensus 330 ~p~fk~Ya~qVv~NAkaLA~~L~~~G~~vvsGgTdnHlvLvDl~~~g~tG~~ae~~Le~agItvNkN~iP~D~sp~~~SG 409 (490)
T 3ou5_A 330 TPMFREYSLQVLKNARAMADALLERGYSLVSGGTDNHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAITPGG 409 (490)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEECGGGTCCHHHHHHHHHHTTEECEEECCTTCCCSSSCSE
T ss_pred hHhHHHHHHHHHHHHHHHHHHHHhCCCeeecCCCCceEEEEeccccCCCHHHHHHHHHHcCcEECCCCCCCCCCCCCCCe
Confidence 346688899999999999999999999763 557888766655322 2222221 23322223444578
Q ss_pred EEEEeeC----CCCHHHHHHHHHHHHHH
Q psy5049 109 SLYESSH----LRSANLWNRPHSPSLMA 132 (153)
Q Consensus 109 lRI~lsA----~HT~edId~L~~~~L~~ 132 (153)
+||-..| ...++|++++.+ .+..
T Consensus 410 iRiGTpa~TtRG~~e~dm~~IA~-~I~~ 436 (490)
T 3ou5_A 410 LRLGAPALTSRQFREDDFRRVVD-FIDE 436 (490)
T ss_dssp EEEESHHHHHTTCCHHHHHHHHH-HHHH
T ss_pred eEECCHHHHhCCCCHHHHHHHHH-HHHH
Confidence 9998654 788999999887 6543
No 220
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=73.83 E-value=5 Score=33.32 Aligned_cols=80 Identities=4% Similarity=-0.160 Sum_probs=47.5
Q ss_pred chHHHHHHHHHHHHHHHHHHhCCCc---------ccCCCCCCeEEEEcCCch-HHHhcc---ccccCCCCCCCCceEEEE
Q psy5049 46 GIRRISVLAHNTRYFRRKLNRLGLI---------VYGHRDSPVVPVLVFFFS-KVGQTS---IGLGVEQTALNDGLSLYE 112 (153)
Q Consensus 46 ~~~rr~~L~~ni~~fr~~L~~~G~~---------~~~~s~SPIiPV~~g~~~-~~~~~a---~~i~~PtVP~g~~RlRI~ 112 (153)
-.+.+++++++..++.+.|++.|+. .. .+.... .++++-+. .+..+. .....|. . .||+
T Consensus 350 ~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~~-~~~~g~-~~~~~~~~~~~~~ll~~~gV~v~~G----~--gRis 421 (448)
T 3meb_A 350 VKEMSARIHRMRSLLHASLAKRKTPGPGSKGTWDHI-LTAIGM-FTFTGLTPEHVDYLKEKWSIYLVKA----G--GRMS 421 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCSTTTCCCTHH-HHCCSS-EEECCCCHHHHHHHHHHHCEEECSG----G--GEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCCcCccccccee-CCCceE-EEecCCCHHHHHHHHHhCCEEEeCC----C--cEEE
Confidence 3567888999999999999987532 11 111222 23444333 333222 2223332 1 2888
Q ss_pred eeCCCCHHHHHHHHHHHHHHHHh
Q psy5049 113 SSHLRSANLWNRPHSPSLMAVFR 135 (153)
Q Consensus 113 lsA~HT~edId~L~~~~L~~~~~ 135 (153)
+ +.+|+++|+++++ +|..+.+
T Consensus 422 ~-a~~~~~~i~~~~~-~l~~~l~ 442 (448)
T 3meb_A 422 M-CGLTESNCDYVAE-AIHDAVT 442 (448)
T ss_dssp G-GGCCTTTHHHHHH-HHHHHHH
T ss_pred E-ecCCHHHHHHHHH-HHHHHHH
Confidence 8 5678888999998 7776655
No 221
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=72.25 E-value=10 Score=32.43 Aligned_cols=66 Identities=11% Similarity=0.087 Sum_probs=42.8
Q ss_pred hHHHHHHHhHHHHHHHhhhc-ccEEeecCCCCCCCCcccc---ccc------ccchHHHHHHHHHHHHHHHHHHhCCCcc
Q psy5049 2 RLISVLAQNTRYFRRKLNRL-GLILYVLFQAQTKPPRSHC---ICF------ISGIRRISVLAHNTRYFRRKLNRLGLIV 71 (153)
Q Consensus 2 ~~~~~~~~~~~~~~~~l~~~-g~~~~~~~~~~~~p~~~~~---l~~------~~~~~rr~~L~~ni~~fr~~L~~~G~~~ 71 (153)
+.++++.+|.+||++.|.+. ||.+++. .+|....+ +.. .........+......+.+.|.+.|...
T Consensus 389 ~~~~~~~~~a~~l~~~L~~~pg~~l~~~----~~p~~~~v~f~~~p~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~G~~~ 464 (511)
T 3vp6_A 389 NQINKCLELAEYLYAKIKNREEFEMVFN----GEPEHTNVCFWYIPQSLRGVPDSPQRREKLHKVAPKIKALMMESGTTM 464 (511)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTEEESSS----SCCSSSCEEEEECCGGGSSCCCCHHHHHHHHHHHHHHHHHHHHHTSCE
T ss_pred HHHHHHHHHHHHHHHHHhcCCCEEEEec----CCCCeEEEEEEEeCccccccccchhHHHHHHHHHHHHHHHHHhcCCEE
Confidence 35678899999999999987 9998652 12322212 111 1123444566677778899998888543
No 222
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=71.72 E-value=6 Score=33.59 Aligned_cols=83 Identities=10% Similarity=-0.028 Sum_probs=50.8
Q ss_pred hHHHHHHHHHHHHHHHHHHhCCC--cccCC----------------CCCCeEEEEcCCc-hHHHhcc-------------
Q psy5049 47 IRRISVLAHNTRYFRRKLNRLGL--IVYGH----------------RDSPVVPVLVFFF-SKVGQTS------------- 94 (153)
Q Consensus 47 ~~rr~~L~~ni~~fr~~L~~~G~--~~~~~----------------s~SPIiPV~~g~~-~~~~~~a------------- 94 (153)
..+.++..+|..++.+.|.+.+. .+... +..+++.+.+.+. +.+..+.
T Consensus 311 ~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~g~ivsf~l~~~~~~~~~~l~~l~~~~i~~s~G 390 (445)
T 1qgn_A 311 HLRVQQQNSTALRMAEILEAHPKVRHVYYPGLQSHPEHHIAKKQMTGFGGAVSFEVDGDLLTTAKFVDALKIPYIAPSFG 390 (445)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSSSSTTHHHHHHHCSCCCSEEEEEESSCHHHHHHHHHHCSSSEECSCCC
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCceEEECCCCCCCchHHHHHHhccCCCcEEEEEECCCHHHHHHHHHhCCCceEeccCC
Confidence 55678888999999999987632 11111 2467999988653 3233322
Q ss_pred ---ccccCCCC------C------CC--CceEEEEeeCCCCHHHHHHHHHHHHHHHH
Q psy5049 95 ---IGLGVEQT------A------LN--DGLSLYESSHLRSANLWNRPHSPSLMAVF 134 (153)
Q Consensus 95 ---~~i~~PtV------P------~g--~~RlRI~lsA~HT~edId~L~~~~L~~~~ 134 (153)
..+.+|+. | .| .+.+|+++. .||+|.+++ .|++..
T Consensus 391 ~~~sl~~~p~~~~h~~~~~~~~~~~g~~~~~iRlSvG----~Edid~li~-~L~~al 442 (445)
T 1qgn_A 391 GCESIVDQPAIMSYWDLSQSDRAKYGIMDNLVRFSFG----VEDFDDLKA-DILQAL 442 (445)
T ss_dssp SSSCEEECHHHHHSTTSCHHHHHTTTCCSSEEEEECC----SSCHHHHHH-HHHHHH
T ss_pred CCceeeecccccccccCCHHHHHhcCCCCCeEEEEec----cCCHHHHHH-HHHHHH
Confidence 11222211 1 12 479999998 468888888 665543
No 223
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=73.37 E-value=0.88 Score=36.78 Aligned_cols=83 Identities=7% Similarity=-0.073 Sum_probs=46.9
Q ss_pred hHHHHHHHHHHHHHHHHHHh-C-CCcccCCCCCCeE-EEEcCC----chHHHhcc----ccccCCCC---CCCCceEEEE
Q psy5049 47 IRRISVLAHNTRYFRRKLNR-L-GLIVYGHRDSPVV-PVLVFF----FSKVGQTS----IGLGVEQT---ALNDGLSLYE 112 (153)
Q Consensus 47 ~~rr~~L~~ni~~fr~~L~~-~-G~~~~~~s~SPIi-PV~~g~----~~~~~~~a----~~i~~PtV---P~g~~RlRI~ 112 (153)
.+.+++++++..++.+.|.+ . |+.+.. +.+..+ .+-+.. .....+.. .....|.. +.+...+||+
T Consensus 293 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~ 371 (392)
T 3b1d_A 293 VALKAVLEENIQFAVEYFAQEAPRLKVMK-PQGTYLIWLDFSDYGLTDDALFTLLHDQAKVILNRGSDYGSEGELHARLN 371 (392)
Confidence 56778888999999998877 3 665432 333322 233332 11111111 11111211 3456789999
Q ss_pred eeCCCCHHHHHHHHHHHHHHH
Q psy5049 113 SSHLRSANLWNRPHSPSLMAV 133 (153)
Q Consensus 113 lsA~HT~edId~L~~~~L~~~ 133 (153)
++. ++++|++.++ .|+.+
T Consensus 372 ~~~--~~e~i~~~l~-~l~~~ 389 (392)
T 3b1d_A 372 IAA--PKSLVEEICK-RIVCC 389 (392)
Confidence 886 5899999777 65543
No 224
>2gjh_A Designed protein; obligate symmetric HOMO-dimer, de novo protein; NMR {}
Probab=67.52 E-value=11 Score=23.57 Aligned_cols=32 Identities=13% Similarity=-0.014 Sum_probs=22.8
Q ss_pred ceEEEEeeCCCCHHHHHHHHHHHHHHHHhcCCCc
Q psy5049 107 GLSLYESSHLRSANLWNRPHSPSLMAVFRGGGPG 140 (153)
Q Consensus 107 ~RlRI~lsA~HT~edId~L~~~~L~~~~~~~~~~ 140 (153)
+|+||+++|. |+.+-+++.+ .|-.++...|-+
T Consensus 2 ervrisitar-tkkeaekfaa-ilikvfaelgyn 33 (62)
T 2gjh_A 2 ERVRISITAR-TKKEAEKFAA-ILIKVFAELGYN 33 (62)
T ss_dssp CEEEEEEECS-SHHHHHHHHH-HHHHHHHHTTCC
T ss_pred ceEEEEEEec-chhHHHHHHH-HHHHHHHHhCcc
Confidence 6899999985 6777788777 565566555544
No 225
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=66.05 E-value=29 Score=28.31 Aligned_cols=83 Identities=6% Similarity=-0.047 Sum_probs=48.9
Q ss_pred chHHHHHHHHHHHHHHHHHHhCC----C--cccC------------CCCCCeEEEEcCCc-hHHHhcc--c-----c---
Q psy5049 46 GIRRISVLAHNTRYFRRKLNRLG----L--IVYG------------HRDSPVVPVLVFFF-SKVGQTS--I-----G--- 96 (153)
Q Consensus 46 ~~~rr~~L~~ni~~fr~~L~~~G----~--~~~~------------~s~SPIiPV~~g~~-~~~~~~a--~-----~--- 96 (153)
.+.+.+++.+|...+.+.+++.+ . ..+. .+.++++.+-+.+. +.+.++. . +
T Consensus 260 ~~~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~i~~~~~s~ 339 (404)
T 1e5e_A 260 LNIRMKAESENAMKVAEYLKSHPAVEKVYYPGFEDHEGHDIAKKQMRMYGSMITFILKSGFEGAKKLLDNLKLITLAVSL 339 (404)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTCSSSTTHHHHHHHCSSCCSEEEEEETTHHHHHHHHHHTCSSSEESSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEeCCCHHHHHHHHHhCCCceeccCC
Confidence 35678888999999998888664 0 0000 11267888877653 3333332 1 1
Q ss_pred ------ccCCCCC------------CC--CceEEEEeeCCCCHHHHHHHHHHHHHHH
Q psy5049 97 ------LGVEQTA------------LN--DGLSLYESSHLRSANLWNRPHSPSLMAV 133 (153)
Q Consensus 97 ------i~~PtVP------------~g--~~RlRI~lsA~HT~edId~L~~~~L~~~ 133 (153)
+.+|+.+ .| .+.+||++.. ||++.+++ .|+.+
T Consensus 340 G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~g~----e~~~~li~-~l~~a 391 (404)
T 1e5e_A 340 GGCESLIQHPASMTHAVVPKEEREAAGITDGMIRLSVGI----EDADELIA-DFKQG 391 (404)
T ss_dssp CSSSCEEECGGGTTTTTSCHHHHHHTTCCTTEEEEECCS----SCHHHHHH-HHHHH
T ss_pred CCcceeeecccccccccCCHHHHHhcCCCCCeEEEEeCC----CCHHHHHH-HHHHH
Confidence 1333321 23 5789999998 67777666 55443
No 226
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=64.65 E-value=21 Score=30.92 Aligned_cols=28 Identities=7% Similarity=-0.142 Sum_probs=21.6
Q ss_pred CCceEEEEeeCCCCHHHHHHHHHHHHHHHH
Q psy5049 105 NDGLSLYESSHLRSANLWNRPHSPSLMAVF 134 (153)
Q Consensus 105 g~~RlRI~lsA~HT~edId~L~~~~L~~~~ 134 (153)
+...+||++. ..++++++++++ .++.+.
T Consensus 492 ~~~~iRis~~-~~~~e~i~~~~~-~l~~~l 519 (546)
T 2zy4_A 492 NRPSGRASLA-NLNEYEYAAIGR-ALRKMA 519 (546)
T ss_dssp SSCEEEEESS-SSCHHHHHHHHH-HHHHHH
T ss_pred CCCeEEEEec-cCCHHHHHHHHH-HHHHHH
Confidence 3567999996 578999999888 666544
No 227
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=60.31 E-value=42 Score=26.00 Aligned_cols=67 Identities=16% Similarity=0.193 Sum_probs=39.5
Q ss_pred HHHHHHHhHHHHHHHhhhcccEEeecCCCCCCCCcccccccccchHHHHHHHHHHHHHHHHHHhCCCcccCCCCCCeEEE
Q psy5049 3 LISVLAQNTRYFRRKLNRLGLILYVLFQAQTKPPRSHCICFISGIRRISVLAHNTRYFRRKLNRLGLIVYGHRDSPVVPV 82 (153)
Q Consensus 3 ~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~p~~~~~l~~~~~~~rr~~L~~ni~~fr~~L~~~G~~~~~~s~SPIiPV 82 (153)
.++++.++++|++++|.+.|+.+.+. | ..+++.-...+ ...+.+.|.+.|+.+...+....+-|
T Consensus 310 ~~~~~~~~~~~l~~~L~~~g~~~~~~------~-~~~~~~~~~~~---------~~~~~~~l~~~gi~v~~~~~~~~~Ri 373 (397)
T 3f9t_A 310 IVNECMENTLYLYKKLKENNFKPVIE------P-ILNIVAIEDED---------YKEVCKKLRDRGIYVSVCNCVKALRI 373 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCBSSC------C-SSSEEEEECTT---------HHHHHHHHHHTTCBCEECSSSSEEEE
T ss_pred HHHHHHHHHHHHHHHHHHCCCEEEcC------C-CccEEEEEeCC---------HHHHHHHHHhCCeEEeccCCCCEEEE
Confidence 46678899999999999999886443 2 12222211111 24566777777876532221245555
Q ss_pred EcC
Q psy5049 83 LVF 85 (153)
Q Consensus 83 ~~g 85 (153)
.++
T Consensus 374 ~~~ 376 (397)
T 3f9t_A 374 VVM 376 (397)
T ss_dssp ECC
T ss_pred EEc
Confidence 555
No 228
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=58.52 E-value=19 Score=30.19 Aligned_cols=113 Identities=7% Similarity=-0.032 Sum_probs=60.9
Q ss_pred HHHHHHHhHHHHHHHhhhcccEEeecCCCCCCCCcccccccccchHHHHHHHHHHHHHHHHHHhCCCcccCCCCCCeEEE
Q psy5049 3 LISVLAQNTRYFRRKLNRLGLILYVLFQAQTKPPRSHCICFISGIRRISVLAHNTRYFRRKLNRLGLIVYGHRDSPVVPV 82 (153)
Q Consensus 3 ~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~p~~~~~l~~~~~~~rr~~L~~ni~~fr~~L~~~G~~~~~~s~SPIiPV 82 (153)
.+++..+|.+++++.|.++||.++...+..-..++-. +... .+ +.+..|.+.|+.... + +.--.|+-..
T Consensus 289 ~~~~~~~~a~~l~~~L~~~g~~v~p~~~~~~~~li~~-i~l~-~~-------~~~~~~~~~l~~~~~-~-~~~~~p~~~~ 357 (431)
T 3ht4_A 289 VAGQALKGAIFTAAFLEKLGMNTSPAWNAPRTDLIQS-VQFD-DK-------DRMIAFCQAIQYASP-I-NSHFTPYANY 357 (431)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCEESCTTSCCSSSCCE-EECC-CH-------HHHHHHHHHHHHTSS-S-STTSCCCCEE
T ss_pred HHHHHHHHHHHHHHHHHhCcCEecCCCCCCCccEEEE-EEeC-CH-------HHHHHHHHHHHhcCc-c-ccccCCCCCC
Confidence 3567889999999999999998854322221221111 2111 11 233456666666542 1 1122454445
Q ss_pred EcCCchHHHhcc--------------ccccCCCCCCCCceEEEEeeCCCCHHHHHHHHHHHHHHHH
Q psy5049 83 LVFFFSKVGQTS--------------IGLGVEQTALNDGLSLYESSHLRSANLWNRPHSPSLMAVF 134 (153)
Q Consensus 83 ~~g~~~~~~~~a--------------~~i~~PtVP~g~~RlRI~lsA~HT~edId~L~~~~L~~~~ 134 (153)
+-|-.+++...+ .++|.|-+ +-+.-..|-+...-.+..+++.+.
T Consensus 358 ~~gy~~~~~~~~~~f~~~~~~e~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~ 415 (431)
T 3ht4_A 358 MPGYEDDVIMAAGTFIQGASIELSADGPIRPPYV--------AYVQGGLTYSHVKIAICSAIDELI 415 (431)
T ss_dssp CTTSSSEEEEECCCSSSSCTTSCEEEEESCTTTE--------EEEECCSSHHHHHHHHHHHHHHTC
T ss_pred CCCCCCceeEecccCCCCcceeccCCCCCCCCeE--------EEEeCCccHHHHHHHHHHHHHHHH
Confidence 555554433332 67777763 344556777777764333444444
No 229
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=56.95 E-value=11 Score=30.46 Aligned_cols=31 Identities=3% Similarity=-0.236 Sum_probs=21.4
Q ss_pred CCCCceEEEEeeCCC-CHHHHHHHHHHHHHHHH
Q psy5049 103 ALNDGLSLYESSHLR-SANLWNRPHSPSLMAVF 134 (153)
Q Consensus 103 P~g~~RlRI~lsA~H-T~edId~L~~~~L~~~~ 134 (153)
|.+...+||+++... ++++++++++ +++...
T Consensus 337 ~~~~~~lRi~~~~~~~~~~~l~~l~~-~l~~~l 368 (374)
T 2aeu_A 337 PGASKSLRIDLTSRDAERIDDNYIIK-AIVESI 368 (374)
T ss_dssp CSSCCSEEEETTSGGGGGSCHHHHHH-HHHHHH
T ss_pred CCCCCeEEEEcCCchHHHHHHHHHHH-HHHHHH
Confidence 556678999997533 4445888888 665544
No 230
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=54.14 E-value=24 Score=30.05 Aligned_cols=89 Identities=10% Similarity=-0.038 Sum_probs=50.8
Q ss_pred ccchHHHHHHHHHHHHHHHHHHhCCCcccCCCCCCe----------EEEEcCCc-------hHHHhcc------ccccCC
Q psy5049 44 ISGIRRISVLAHNTRYFRRKLNRLGLIVYGHRDSPV----------VPVLVFFF-------SKVGQTS------IGLGVE 100 (153)
Q Consensus 44 ~~~~~rr~~L~~ni~~fr~~L~~~G~~~~~~s~SPI----------iPV~~g~~-------~~~~~~a------~~i~~P 100 (153)
.+.+.+.++..+.-.+|+++|+++.-.. ....+|+ +.|-+.++ +.+.++. -.+..|
T Consensus 342 i~~~~l~~~~~~~g~~l~~~L~~l~~~~-~~~~~~~v~~VRG~Gl~~giel~~~~~~~~~~~~~~~v~~~~~~~Gvl~~~ 420 (456)
T 4atq_A 342 MEQHDLNGRARHIEELALGKLRELAAEL-SAGGGSVVGDIRGRGAMLAIELVQPGSKEPNAELTKAVAAACLKEGVIILT 420 (456)
T ss_dssp HHHTTHHHHHHHHHHHHHHHHHHHHHHC-C-----CEEEEEEETTEEEEEEBCTTSCCBCHHHHHHHHHHHHHTTEECEE
T ss_pred HhhccHHHHHHHHHHHHHHHHHHHHHhc-ccccCCceEEeeecceEEEEEEecCCCCCcCHHHHHHHHHHHHHCCCEEEe
Confidence 3445677888888888988887642111 1111232 33333221 1222222 233444
Q ss_pred CCCCCCceEEEEeeCCCCHHHHHHHHHHHHHHHHh
Q psy5049 101 QTALNDGLSLYESSHLRSANLWNRPHSPSLMAVFR 135 (153)
Q Consensus 101 tVP~g~~RlRI~lsA~HT~edId~L~~~~L~~~~~ 135 (153)
.-|. ...+||...-.+|+||||..++ .+++..+
T Consensus 421 ~g~~-~~~irl~PpL~it~~~id~~l~-~l~~al~ 453 (456)
T 4atq_A 421 CGTY-GNVIRLLPPLVISDELLIDGLE-VLAAAIK 453 (456)
T ss_dssp ECTT-SCEEEECCCTTCCHHHHHHHHH-HHHHHHH
T ss_pred cCCC-CCEEEEECCCCCCHHHHHHHHH-HHHHHHH
Confidence 4333 3579999999999999999988 7765543
No 231
>1qys_A TOP7; alpha-beta, novel fold, de novo protein; 2.50A {Computationally designed sequence} SCOP: k.41.1.1
Probab=53.68 E-value=25 Score=23.98 Aligned_cols=36 Identities=11% Similarity=-0.064 Sum_probs=25.7
Q ss_pred CCCceEEEEeeCCCCHHHHHHHHHHHHHHHHhcCCCce
Q psy5049 104 LNDGLSLYESSHLRSANLWNRPHSPSLMAVFRGGGPGI 141 (153)
Q Consensus 104 ~g~~RlRI~lsA~HT~edId~L~~~~L~~~~~~~~~~~ 141 (153)
.|.-|+||+++|. |+.+-+++.+ .|-.++...|-+-
T Consensus 43 qgakrvrisitar-tkkeaekfaa-ilikvfaelgynd 78 (106)
T 1qys_A 43 QGAKRVRISITAR-TKKEAEKFAA-ILIKVFAELGYND 78 (106)
T ss_dssp HCCSEEEEEEECS-SHHHHHHHHH-HHHHHHHHTTCCE
T ss_pred cCCcEEEEEEEec-chhHHHHHHH-HHHHHHHHhCCcc
Confidence 4678999999985 5677788777 6666666655543
No 232
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=50.65 E-value=62 Score=26.53 Aligned_cols=85 Identities=13% Similarity=0.024 Sum_probs=53.0
Q ss_pred chHHHHHHHHHHHHHHHHHHhCCCc--cc--C--------------CCCCCeEEEEcCCc-hHHHhcc------------
Q psy5049 46 GIRRISVLAHNTRYFRRKLNRLGLI--VY--G--------------HRDSPVVPVLVFFF-SKVGQTS------------ 94 (153)
Q Consensus 46 ~~~rr~~L~~ni~~fr~~L~~~G~~--~~--~--------------~s~SPIiPV~~g~~-~~~~~~a------------ 94 (153)
-..+.+++.+|..++.+.|.+.... +. + .+...++.+-+... +.+..+.
T Consensus 264 l~~r~~~~~~~a~~l~~~L~~~p~v~~V~~p~l~~~~~~~~~~~~~~g~G~~~~~~l~~~~~~~~~~~~~l~~~~~~~s~ 343 (400)
T 3nmy_A 264 LPLRMRAHCENALALAQWLETHPAIEKVIYPGLASHPQHVLAKRQMSGFGGIVSIVLKGGFDAAKRFCEKTELFTLAESL 343 (400)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTHHHHHHHHHHHCSSSEECSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEeCCcHHHHHHHHHcCCcceEecCC
Confidence 3678889999999999999865321 10 0 12356889888543 3333322
Q ss_pred ----ccccCCCCC--------------CCCceEEEEeeCCCCHHHHHHHHHHHHH
Q psy5049 95 ----IGLGVEQTA--------------LNDGLSLYESSHLRSANLWNRPHSPSLM 131 (153)
Q Consensus 95 ----~~i~~PtVP--------------~g~~RlRI~lsA~HT~edId~L~~~~L~ 131 (153)
..+.+|+.- .....+|+++.-.++++.|+.+.. +|+
T Consensus 344 G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liRlsvGle~~~dli~dl~~-al~ 397 (400)
T 3nmy_A 344 GGVESLVNHPAVMTHASIPVARREQLGISDALVRLSVGIEDLGDLRGDLER-ALV 397 (400)
T ss_dssp CSSSCEEECTTTTTTTTSCHHHHHHHTCCTTEEEEECCSSCHHHHHHHHHH-HHC
T ss_pred CCCcceeeCccccccccCCHHHHHhcCCCcCeEEEEeCcCCHHHHHHHHHH-HHh
Confidence 223344321 135789999999888877776655 543
No 233
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=48.71 E-value=22 Score=28.99 Aligned_cols=26 Identities=23% Similarity=0.157 Sum_probs=22.2
Q ss_pred HHHHHHHhHHHHHHHhhhcccEEeec
Q psy5049 3 LISVLAQNTRYFRRKLNRLGLILYVL 28 (153)
Q Consensus 3 ~~~~~~~~~~~~~~~l~~~g~~~~~~ 28 (153)
..+++.+|++||++.|+++||.+++.
T Consensus 317 ~~~~~~~~~~~l~~~L~~~g~~~~~~ 342 (427)
T 2w8t_A 317 KRERLWSNARALHGGLKAMGFRLGTE 342 (427)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCEESCS
T ss_pred HHHHHHHHHHHHHHHHHHcCCcccCC
Confidence 45788999999999999999988644
No 234
>2ebm_A RWD domain-containing protein 1; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=48.16 E-value=31 Score=23.80 Aligned_cols=46 Identities=20% Similarity=-0.095 Sum_probs=31.4
Q ss_pred ccccCCCCCCCCceEEEEeeCCCCHHHHHHHHHHHHHHHHh--cCCCceeee
Q psy5049 95 IGLGVEQTALNDGLSLYESSHLRSANLWNRPHSPSLMAVFR--GGGPGIFPL 144 (153)
Q Consensus 95 ~~i~~PtVP~g~~RlRI~lsA~HT~edId~L~~~~L~~~~~--~~~~~~~~~ 144 (153)
.+-.||.+| +.+-+.-..+.+++++..+.+ .|....+ .|.+++|.+
T Consensus 63 ~p~~YP~~~---P~i~l~~~~~l~~~~~~~L~~-~L~~~~~e~~G~~mif~l 110 (128)
T 2ebm_A 63 YSEKYPDEA---PLYEIFSQENLEDNDVSDILK-LLALQAEENLGMVMIFTL 110 (128)
T ss_dssp CCSSTTTSC---CEEEEEEESSCCHHHHHHHHH-HHHHHHHHHTTSCCHHHH
T ss_pred eCCCCCCCC---ceEEEEcCCCCCHHHHHHHHH-HHHHHHHHhCCCEEHHHH
Confidence 555788865 555555445899999999998 6665543 366677654
No 235
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=48.14 E-value=44 Score=27.82 Aligned_cols=26 Identities=12% Similarity=0.183 Sum_probs=22.2
Q ss_pred HHHHHHHhHHHHHHHhhhcccEEeec
Q psy5049 3 LISVLAQNTRYFRRKLNRLGLILYVL 28 (153)
Q Consensus 3 ~~~~~~~~~~~~~~~l~~~g~~~~~~ 28 (153)
.+.+..+|.+++++.|.++||.+|..
T Consensus 283 r~~~~~~~a~~la~~L~~~g~~v~p~ 308 (409)
T 3jzl_A 283 VTAQAIKGARFTAAMLAEFGVEADPV 308 (409)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCEEESC
T ss_pred HHHHHHHHHHHHHHHHHhCCCcccCC
Confidence 35678899999999999999998544
No 236
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=46.86 E-value=21 Score=28.29 Aligned_cols=26 Identities=12% Similarity=0.055 Sum_probs=21.9
Q ss_pred HHHHHHHhHHHHHHHhhhcccEEeec
Q psy5049 3 LISVLAQNTRYFRRKLNRLGLILYVL 28 (153)
Q Consensus 3 ~~~~~~~~~~~~~~~l~~~g~~~~~~ 28 (153)
..+++.++.+|++++|.+.|+.+++.
T Consensus 291 ~~~~~~~~~~~l~~~L~~~g~~~~~~ 316 (411)
T 3nnk_A 291 GIARHKLHGDALVKGIQAMGLETFGD 316 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCBCSC
T ss_pred HHHHHHHHHHHHHHHHHHcCCEeCCC
Confidence 45677889999999999999998654
No 237
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=46.53 E-value=24 Score=27.28 Aligned_cols=26 Identities=8% Similarity=-0.107 Sum_probs=21.3
Q ss_pred HHHHHHHhHHHHHHHhhhc-ccEEeec
Q psy5049 3 LISVLAQNTRYFRRKLNRL-GLILYVL 28 (153)
Q Consensus 3 ~~~~~~~~~~~~~~~l~~~-g~~~~~~ 28 (153)
..++..++.+||++.|.++ |+.+++.
T Consensus 257 ~~~~~~~~~~~l~~~L~~~~~~~~~~~ 283 (382)
T 4hvk_A 257 EAERLRRLRDRIIDNVLKIEESYLNGH 283 (382)
T ss_dssp HHHHHHHHHHHHHHHHTTSTTEEECSC
T ss_pred HHHHHHHHHHHHHHHHhcCCCeEEeCC
Confidence 4567888999999999987 8888654
No 238
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=45.76 E-value=30 Score=26.87 Aligned_cols=26 Identities=12% Similarity=0.037 Sum_probs=21.7
Q ss_pred HHHHHHHhHHHHHHHhhhcccEEeec
Q psy5049 3 LISVLAQNTRYFRRKLNRLGLILYVL 28 (153)
Q Consensus 3 ~~~~~~~~~~~~~~~l~~~g~~~~~~ 28 (153)
..+++.++.+|++++|.+.|+.+++.
T Consensus 261 ~~~~~~~~~~~l~~~L~~~g~~~~~~ 286 (384)
T 1eg5_A 261 AAKHMEKLRSKLVSGLMNLGAHIITP 286 (384)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCEECSC
T ss_pred HHHHHHHHHHHHHHHhCCCCeEEeCC
Confidence 45678899999999999999988653
No 239
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=44.62 E-value=25 Score=27.41 Aligned_cols=25 Identities=20% Similarity=0.347 Sum_probs=21.3
Q ss_pred HHHHHHHhHHHHHHHhhhcccEEee
Q psy5049 3 LISVLAQNTRYFRRKLNRLGLILYV 27 (153)
Q Consensus 3 ~~~~~~~~~~~~~~~l~~~g~~~~~ 27 (153)
..+++.++.+|+++.|.+.|+.+++
T Consensus 288 ~~~~~~~~~~~l~~~L~~~g~~~~~ 312 (393)
T 3kgw_A 288 CWRRHREATAHLHKHLQEMGLKFFV 312 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCBSS
T ss_pred HHHHHHHHHHHHHHHHHHcCCeecc
Confidence 3567889999999999999998764
No 240
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=44.05 E-value=25 Score=27.88 Aligned_cols=26 Identities=12% Similarity=0.124 Sum_probs=21.9
Q ss_pred HHHHHHHhHHHHHHHhhhcccEEeec
Q psy5049 3 LISVLAQNTRYFRRKLNRLGLILYVL 28 (153)
Q Consensus 3 ~~~~~~~~~~~~~~~l~~~g~~~~~~ 28 (153)
..+++.++.+|++++|.+.|+.+++.
T Consensus 291 ~~~~~~~~~~~l~~~L~~~g~~~~~~ 316 (416)
T 3isl_A 291 RFERHRHHEAALAAGIKAMGLRLFGD 316 (416)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCBCSC
T ss_pred HHHHHHHHHHHHHHHHHHcCCEeccC
Confidence 45678889999999999999988654
No 241
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=43.37 E-value=98 Score=25.75 Aligned_cols=82 Identities=11% Similarity=-0.046 Sum_probs=49.6
Q ss_pred chHHHHHHHHHHHHHHHHHHhCC-Cc-cc--CCCCCC--------------eEEEEcCCchHHHhcc-------------
Q psy5049 46 GIRRISVLAHNTRYFRRKLNRLG-LI-VY--GHRDSP--------------VVPVLVFFFSKVGQTS------------- 94 (153)
Q Consensus 46 ~~~rr~~L~~ni~~fr~~L~~~G-~~-~~--~~s~SP--------------IiPV~~g~~~~~~~~a------------- 94 (153)
-..+.++..+|+.++.+.|.+.. .. +. +-.++| ++.+-+.+.+.+.++.
T Consensus 298 l~~r~~~~~~na~~la~~L~~~p~v~~V~~P~l~~~p~~~~~~~~~g~Gg~~lsf~l~~~~~~~~~~~~l~~~~~~~s~G 377 (430)
T 3ri6_A 298 MALRIERSCQNAQELAHWLLSIPQVKCVNHPSLPDSPFYAIAKRQFRYAGSILTFELESKEASYRFMDALKLIRRATNIH 377 (430)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCTTCEEEECTTSTTSTTHHHHHHHCSSCCSEEEEECSSHHHHHHHHHHCSSSEECSCCS
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECCHHHHHHHHHhCCcceecCCCC
Confidence 36677888999999999998653 21 11 112233 9999998655554432
Q ss_pred ---ccccCCCC--------------CCCCceEEEEeeCCCCHHHHHHHHH
Q psy5049 95 ---IGLGVEQT--------------ALNDGLSLYESSHLRSANLWNRPHS 127 (153)
Q Consensus 95 ---~~i~~PtV--------------P~g~~RlRI~lsA~HT~edId~L~~ 127 (153)
..+.+|+. -.....+|+++.-.+.++-++.+-.
T Consensus 378 ~~~sli~~p~~~~h~~~~~~~~~~~g~~~~liRlsvG~E~~~dl~~dl~~ 427 (430)
T 3ri6_A 378 DNKSLILSPYHVIYALNSHEERLKLEISPAMMRLSVGIEEIEDLKEDILQ 427 (430)
T ss_dssp CSSCEEECTGGGC---------CGGGSCTTEEEEECCSSCHHHHHHHHHH
T ss_pred CCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHH
Confidence 22223311 1235789999987776655555443
No 242
>3ry0_A Putative tautomerase; oxalocrotonate tautomerase family, isomerase; 1.40A {Streptomyces achromogenes}
Probab=43.32 E-value=39 Score=20.37 Aligned_cols=31 Identities=13% Similarity=-0.205 Sum_probs=24.3
Q ss_pred ceEEEEeeCCCCHHHHHHHHHHHHHHHHhcC
Q psy5049 107 GLSLYESSHLRSANLWNRPHSPSLMAVFRGG 137 (153)
Q Consensus 107 ~RlRI~lsA~HT~edId~L~~~~L~~~~~~~ 137 (153)
+.++|.+....|+|+-.+|++...+.+.+.+
T Consensus 1 P~i~I~~~~Grs~eqk~~L~~~it~~~~~~l 31 (65)
T 3ry0_A 1 PLIRVTLLEGRSPQEVAALGEALTAAAHETL 31 (65)
T ss_dssp CEEEEEEESCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEcCCCCHHHHHHHHHHHHHHHHHHh
Confidence 3578999999999999999994555666643
No 243
>2dsy_A Hypothetical protein TTHA0281; structural genomics, thermus thermophilus HB8, NPPSFA; HET: NHE; 1.90A {Thermus thermophilus} SCOP: d.304.1.2
Probab=42.58 E-value=69 Score=21.03 Aligned_cols=61 Identities=15% Similarity=-0.035 Sum_probs=44.9
Q ss_pred HHHHHHHhhhcccEEe---ecCCCCCCCCcccccccccchHHHHHHHHHHHHHHHHHHhCCCcc
Q psy5049 11 TRYFRRKLNRLGLILY---VLFQAQTKPPRSHCICFISGIRRISVLAHNTRYFRRKLNRLGLIV 71 (153)
Q Consensus 11 ~~~~~~~l~~~g~~~~---~~~~~~~~p~~~~~l~~~~~~~rr~~L~~ni~~fr~~L~~~G~~~ 71 (153)
|+|....|.++-|.|. |-|.+..|=+=.|+-......+..+.+++-+...-..+.+.|..+
T Consensus 8 ~~y~~~aM~~~~Y~ii~edg~y~~~~Pdlpgc~t~G~T~eEA~~~a~eAl~~~le~~~e~g~~i 71 (87)
T 2dsy_A 8 TRYLEEAMARARYELIADEEPYYGEIPDLPGVWATGKSLKECEANLQAALEDWLLFLLSRGETP 71 (87)
T ss_dssp HHHHHHHHHTCEEEECSSSSCEEEECTTSTTCEEEESSHHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHhceeEEEecCCEEEEEECCCCCeeEeeCCHHHHHHHHHHHHHHHHHHHHHCCCCC
Confidence 6799999999988886 234555554434545556668889999998888888888888765
No 244
>2day_A Ring finger protein 25; ligase, metal-binding, UB1 conjugation, UB1 conjugation pathway, RWD domain, alpha+beta sandwich fold, structural genomics; NMR {Homo sapiens} SCOP: d.20.1.3 PDB: 2dmf_A
Probab=40.80 E-value=35 Score=23.51 Aligned_cols=46 Identities=13% Similarity=0.021 Sum_probs=31.4
Q ss_pred ccccCCCCCCCCceEEEEeeCCCCHHHHHHHHHHHHHHHH-hc-CCCceeee
Q psy5049 95 IGLGVEQTALNDGLSLYESSHLRSANLWNRPHSPSLMAVF-RG-GGPGIFPL 144 (153)
Q Consensus 95 ~~i~~PtVP~g~~RlRI~lsA~HT~edId~L~~~~L~~~~-~~-~~~~~~~~ 144 (153)
.+-.||.+| +.+-+.-..+.+.+++..+.+ .|.... +. |.+++|.|
T Consensus 67 ~p~~YP~~~---P~i~~~~~~~L~~~~~~~L~~-~L~~~~~e~~G~~mif~l 114 (128)
T 2day_A 67 VPAEYPHEV---PQISIRNPRGLSDEQIHTILQ-VLGHVAKAGLGTAMLYEL 114 (128)
T ss_dssp ECSSTTSSC---CEEEEEEEESSCHHHHHHHHH-HHHHHHHHTTTSCCHHHH
T ss_pred cCCCCCCCC---CCeEEEcCCCCCHHHHHHHHH-HHHHHHHHhCCCEEhHHH
Confidence 455788875 566666666799999999998 776554 33 55555543
No 245
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=40.16 E-value=29 Score=28.00 Aligned_cols=26 Identities=23% Similarity=0.295 Sum_probs=22.1
Q ss_pred HHHHHHHhHHHHHHHhhhcccEEeec
Q psy5049 3 LISVLAQNTRYFRRKLNRLGLILYVL 28 (153)
Q Consensus 3 ~~~~~~~~~~~~~~~l~~~g~~~~~~ 28 (153)
..+++.+|.+||++.|.+.|+.+++.
T Consensus 334 ~~~~~~~~~~~l~~~L~~~g~~~~~~ 359 (432)
T 3ei9_A 334 VIGFYKENTNIIIDTFTSLGYDVYGG 359 (432)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCEEEC
T ss_pred HHHHHHHHHHHHHHHHHHCCceecCC
Confidence 45678899999999999999988764
No 246
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=39.36 E-value=48 Score=26.18 Aligned_cols=26 Identities=19% Similarity=0.284 Sum_probs=21.8
Q ss_pred HHHHHHHhHHHHHHHhhhcccEEeec
Q psy5049 3 LISVLAQNTRYFRRKLNRLGLILYVL 28 (153)
Q Consensus 3 ~~~~~~~~~~~~~~~l~~~g~~~~~~ 28 (153)
.+++..++.+||++.|.+.|+.+++.
T Consensus 270 ~~~~~~~~~~~l~~~L~~~g~~~~~~ 295 (391)
T 3dr4_A 270 HLAARERVVGWYEQKLARLGNRVTKP 295 (391)
T ss_dssp HHHHHHHHHHHHHHHHGGGTTSEECC
T ss_pred HHHHHHHHHHHHHHHhhcCCccccCc
Confidence 35677889999999999999988664
No 247
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=38.87 E-value=45 Score=25.88 Aligned_cols=26 Identities=8% Similarity=-0.107 Sum_probs=21.2
Q ss_pred HHHHHHHhHHHHHHHhhhc-ccEEeec
Q psy5049 3 LISVLAQNTRYFRRKLNRL-GLILYVL 28 (153)
Q Consensus 3 ~~~~~~~~~~~~~~~l~~~-g~~~~~~ 28 (153)
..+++.++.+|++++|.++ |+.+++.
T Consensus 257 ~~~~~~~~~~~l~~~L~~~~~~~~~~~ 283 (382)
T 4eb5_A 257 EAERLRRLRDRIIDNVLKIEESYLNGH 283 (382)
T ss_dssp HHHHHHHHHHHHHHHHTTSTTEEECSC
T ss_pred HHHHHHHHHHHHHHHHhhCCCeEEeCC
Confidence 3567888999999999998 8887653
No 248
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=38.78 E-value=37 Score=28.53 Aligned_cols=26 Identities=12% Similarity=-0.120 Sum_probs=22.1
Q ss_pred HHHHHHHhHHHHHHHhhhc-ccEEeec
Q psy5049 3 LISVLAQNTRYFRRKLNRL-GLILYVL 28 (153)
Q Consensus 3 ~~~~~~~~~~~~~~~l~~~-g~~~~~~ 28 (153)
.+++..++.+||+++|.+. ||.+++.
T Consensus 374 ~~~~~~~~a~~l~~~L~~~~g~~l~~~ 400 (475)
T 3k40_A 374 HIRRHCNFAKQFGDLCVADSRFELAAE 400 (475)
T ss_dssp HHHHHHHHHHHHHHHHHHSTTEEESSC
T ss_pred HHHHHHHHHHHHHHHHhcCCCEEEecC
Confidence 4677889999999999998 9998654
No 249
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=37.81 E-value=28 Score=26.81 Aligned_cols=25 Identities=4% Similarity=-0.012 Sum_probs=21.4
Q ss_pred HHHHHHHhHHHHHHHhhhc-ccEEee
Q psy5049 3 LISVLAQNTRYFRRKLNRL-GLILYV 27 (153)
Q Consensus 3 ~~~~~~~~~~~~~~~l~~~-g~~~~~ 27 (153)
..++..+|.+|+++.|.+. |+.++.
T Consensus 267 ~~~~~~~~~~~l~~~L~~~~g~~~~~ 292 (362)
T 3ffr_A 267 IRKQTEEKAALINTYIESSKVFSFGV 292 (362)
T ss_dssp HHHHHHHHHHHHHHHHHHCSSEEESS
T ss_pred HHHHHHHHHHHHHHHHHHccCceecc
Confidence 4567889999999999999 999865
No 250
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=37.74 E-value=59 Score=27.16 Aligned_cols=64 Identities=11% Similarity=0.083 Sum_probs=38.8
Q ss_pred HHHHHHHhHHHHHHHhhhc-ccEEeecCCCCCCCCcccccc---cc------cchHHHHHHHHHHHHHHHHHHhCCCc
Q psy5049 3 LISVLAQNTRYFRRKLNRL-GLILYVLFQAQTKPPRSHCIC---FI------SGIRRISVLAHNTRYFRRKLNRLGLI 70 (153)
Q Consensus 3 ~~~~~~~~~~~~~~~l~~~-g~~~~~~~~~~~~p~~~~~l~---~~------~~~~rr~~L~~ni~~fr~~L~~~G~~ 70 (153)
.+++..++++||.++|.+. ||.++++ .+|-..+++- .. ...+..+.+.+....+.+.|.+.|..
T Consensus 387 ~~~~~~~~a~~l~~~L~~~~~~~~~~~----~~p~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~ 460 (504)
T 2okj_A 387 QINKCLELAEYLYAKIKNREEFEMVFN----GEPEHTNVCFWYIPQSLRGVPDSPQRREKLHKVAPKIKALMMESGTT 460 (504)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTEEESSS----SCCSSSCEEEEECCGGGSSCCCCHHHHHHHTTHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHHHHHhcCCCEEEEec----CCCCeEEEEEEEeCccccccccchhhHHHHHHHHHHHHHHHHhCCcE
Confidence 4677889999999999997 9998763 1233333311 11 11222333444456677788877753
No 251
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=37.72 E-value=43 Score=26.54 Aligned_cols=26 Identities=31% Similarity=0.299 Sum_probs=21.4
Q ss_pred HHHHHHHhHHHHHHHhhhc-ccEEeec
Q psy5049 3 LISVLAQNTRYFRRKLNRL-GLILYVL 28 (153)
Q Consensus 3 ~~~~~~~~~~~~~~~l~~~-g~~~~~~ 28 (153)
..++..+|.+||+++|.+. |+.+++.
T Consensus 271 ~~~~~~~~~~~l~~~L~~~~~~~~~~~ 297 (390)
T 3b8x_A 271 FISVRRKNAEYFLDKFKDHPYLDVQQE 297 (390)
T ss_dssp HHHHHHHHHHHHHHHHTTCSSEEECCC
T ss_pred HHHHHHHHHHHHHHHhcCCCCcccCCC
Confidence 4567789999999999987 8888653
No 252
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=36.68 E-value=74 Score=26.69 Aligned_cols=25 Identities=8% Similarity=-0.023 Sum_probs=21.8
Q ss_pred HHHHHHhHHHHHHHhhhcccEEeec
Q psy5049 4 ISVLAQNTRYFRRKLNRLGLILYVL 28 (153)
Q Consensus 4 ~~~~~~~~~~~~~~l~~~g~~~~~~ 28 (153)
+.+..+|..++++.|.++||.||-.
T Consensus 301 ~~~~~~~a~~la~~L~~~g~~V~p~ 325 (427)
T 3i16_A 301 SMEALKGAILCSRIMELAGFEVMPK 325 (427)
T ss_dssp HHHHHHHHHHHHHHHHHTTCEEESC
T ss_pred HHHHHHHHHHHHHHHHhCCCeecCC
Confidence 5688899999999999999998543
No 253
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=36.60 E-value=63 Score=27.15 Aligned_cols=62 Identities=13% Similarity=0.148 Sum_probs=38.1
Q ss_pred HHHHHHHhHHHHHHHhhhc-ccEEeecCCCCCCCCcccc-c--ccc------cchHHHHHHHHHHHHHHHHHHhCCCc
Q psy5049 3 LISVLAQNTRYFRRKLNRL-GLILYVLFQAQTKPPRSHC-I--CFI------SGIRRISVLAHNTRYFRRKLNRLGLI 70 (153)
Q Consensus 3 ~~~~~~~~~~~~~~~l~~~-g~~~~~~~~~~~~p~~~~~-l--~~~------~~~~rr~~L~~ni~~fr~~L~~~G~~ 70 (153)
.+++..++++||.++|.+. ||.+++. |-...+ + ... ...+..+.|.+....+.+.+.+.|..
T Consensus 402 ~~~~~~~~a~~l~~~L~~~~g~~~~~~------~~~~~v~f~~~p~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~G~~ 473 (515)
T 2jis_A 402 RIDQAFVLARYLVEEMKKREGFELVME------PEFVNVCFWFVPPSLRGKQESPDYHERLSKVAPVLKERMVKEGSM 473 (515)
T ss_dssp HHHHHHHHHHHHHHHHHTSTTEEESSC------CSSSEEEEEECCGGGTTCTTSTTHHHHHHTHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHHHHHhcCCCEEEeCC------CCeeEEEEEEeCccccccccchhHHHHHHHHHHHHHHHHHhcCCE
Confidence 4667889999999999997 9998764 222222 1 111 11334445554445566777777754
No 254
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=36.42 E-value=28 Score=27.79 Aligned_cols=27 Identities=7% Similarity=-0.011 Sum_probs=22.6
Q ss_pred HHHHHHHhHHHHHHHhhhc-ccEEeecC
Q psy5049 3 LISVLAQNTRYFRRKLNRL-GLILYVLF 29 (153)
Q Consensus 3 ~~~~~~~~~~~~~~~l~~~-g~~~~~~~ 29 (153)
..+++.++.++|+++|.++ |+.+++..
T Consensus 285 ~~~~~~~~~~~l~~~L~~~~~~~~~~~~ 312 (423)
T 3lvm_A 285 EMERLRGLRNRLWNGIKDIEEVYLNGDL 312 (423)
T ss_dssp HHHHHHHHHHHHHHHHTTSTTEEEESCS
T ss_pred HHHHHHHHHHHHHHHHhcCCCEEEeCCc
Confidence 4567888999999999998 99987653
No 255
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=35.92 E-value=28 Score=27.78 Aligned_cols=25 Identities=12% Similarity=-0.005 Sum_probs=21.3
Q ss_pred HHHHHHhHHHHHHHhhhcccEEeec
Q psy5049 4 ISVLAQNTRYFRRKLNRLGLILYVL 28 (153)
Q Consensus 4 ~~~~~~~~~~~~~~l~~~g~~~~~~ 28 (153)
.++..++++||+++|.++||.+++.
T Consensus 277 ~~~~~~l~~~l~~~l~~~g~~~~~~ 301 (379)
T 3ke3_A 277 RDAQWELGNRVRKVLTDKGIESVAA 301 (379)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCBSBC
T ss_pred HHHHHHHHHHHHHHHHHcCCEecCC
Confidence 4567789999999999999998764
No 256
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=35.43 E-value=27 Score=30.12 Aligned_cols=24 Identities=21% Similarity=0.152 Sum_probs=21.3
Q ss_pred HHHHHHHhHHHHHHHhhhcccEEe
Q psy5049 3 LISVLAQNTRYFRRKLNRLGLILY 26 (153)
Q Consensus 3 ~~~~~~~~~~~~~~~l~~~g~~~~ 26 (153)
..+++.+|.+||+++|++.||.+.
T Consensus 336 ~~~~~~~na~~L~~~L~~~G~~v~ 359 (490)
T 2a7v_A 336 YSLQVLKNARAMADALLERGYSLV 359 (490)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCEEG
T ss_pred HHHHHHHHHHHHHHHHHHcCcEEe
Confidence 457888999999999999999985
No 257
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=35.32 E-value=44 Score=26.27 Aligned_cols=24 Identities=13% Similarity=0.135 Sum_probs=19.3
Q ss_pred HHHHHHHhHHHHHHHhhhcccEEe
Q psy5049 3 LISVLAQNTRYFRRKLNRLGLILY 26 (153)
Q Consensus 3 ~~~~~~~~~~~~~~~l~~~g~~~~ 26 (153)
.+++..++.+++++.|.+.|+.+.
T Consensus 248 ~~~~~~~~~~~~~~~L~~~~~~~~ 271 (367)
T 3nyt_A 248 EIALRQKVAAEYDLSLKQVGIGTP 271 (367)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred HHHHHHHHHHHHHHHhccCCeecc
Confidence 346677889999999999997653
No 258
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=35.23 E-value=2.1e+02 Score=24.45 Aligned_cols=29 Identities=3% Similarity=-0.293 Sum_probs=24.3
Q ss_pred CceEEEEeeCCCCHHHHHHHHHHHHHHHHh
Q psy5049 106 DGLSLYESSHLRSANLWNRPHSPSLMAVFR 135 (153)
Q Consensus 106 ~~RlRI~lsA~HT~edId~L~~~~L~~~~~ 135 (153)
...+=+.++-..|++|++++++ +|+.+.+
T Consensus 413 ~~~i~~~~sig~~~~di~~l~~-~L~~~~~ 441 (450)
T 3bc8_A 413 CAYLNAAAAIGMKMQDVDLFIK-RLDKCLN 441 (450)
T ss_dssp SCEEEEECCTTCCHHHHHHHHH-HHHHHHH
T ss_pred CCcEEEEecCCCCHHHHHHHHH-HHHHHHH
Confidence 4677788888999999999999 8887754
No 259
>1ukx_A GCN2, GCN2 EIF2alpha kinase; UBC-like fold, triple beta-turns, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.20.1.3
Probab=35.06 E-value=19 Score=25.21 Aligned_cols=46 Identities=17% Similarity=-0.009 Sum_probs=30.6
Q ss_pred ccccCCCCCCCCceEEEEeeCCCCHHHHHHHHHHHHHHHHhc--CCCceeee
Q psy5049 95 IGLGVEQTALNDGLSLYESSHLRSANLWNRPHSPSLMAVFRG--GGPGIFPL 144 (153)
Q Consensus 95 ~~i~~PtVP~g~~RlRI~lsA~HT~edId~L~~~~L~~~~~~--~~~~~~~~ 144 (153)
.+-.||.+| +.+-+.-+.+.+++++..+.+ .|+...+. |.+++|.+
T Consensus 71 ~p~~YP~~~---P~i~l~~~~~L~~~~~~~L~~-~L~~~~~e~~G~~mif~l 118 (137)
T 1ukx_A 71 CPPTYPDVV---PEIDLKNAKGLSNESVNLLKS-HLEELAKKQCGEVMIFEL 118 (137)
T ss_dssp CCTTTTSSC---CCCEEEEEESSSSSHHHHHHH-HHHHHHHHHTTSCCHHHH
T ss_pred CCCCCCCCC---CcEEEecCCCCCHHHHHHHHH-HHHHHHHHhCCCEEhHHH
Confidence 455788765 445554445778889999888 77666543 66677654
No 260
>2yz0_A Serine/threonine-protein kinase GCN2; A-B-B-B-B-A-A, amino acid starvation signal response, EIF2alpha kinase, transferase; NMR {Saccharomyces cerevisiae}
Probab=34.84 E-value=37 Score=23.77 Aligned_cols=46 Identities=13% Similarity=0.039 Sum_probs=30.3
Q ss_pred ccccCCCCCCCCceEEEEeeCCCCHHHHHHHHHHHHHHHHh-c-CCCceeee
Q psy5049 95 IGLGVEQTALNDGLSLYESSHLRSANLWNRPHSPSLMAVFR-G-GGPGIFPL 144 (153)
Q Consensus 95 ~~i~~PtVP~g~~RlRI~lsA~HT~edId~L~~~~L~~~~~-~-~~~~~~~~ 144 (153)
.+-.||.+| +.+-+.-..+.+.+++..+.+ .|....+ . |.+++|.+
T Consensus 70 ~p~~YP~~~---P~i~l~~~~~L~~~~~~~L~~-~L~~~~~e~~G~~mif~l 117 (138)
T 2yz0_A 70 MTPMYPYTA---PEIEFKNVQNVMDSQLQMLKS-EFKKIHNTSRGQEIIFEI 117 (138)
T ss_dssp CCSSTTSSC---CEEEEECCCSCCSHHHHHHHH-HHHHHHHHSTTSCCHHHH
T ss_pred CCCCCCCCC---CeEEEecCCCCCHHHHHHHHH-HHHHHHHHhCCCEEHHHH
Confidence 555788765 555554344688999999988 7765543 3 55666643
No 261
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=34.12 E-value=44 Score=28.00 Aligned_cols=26 Identities=8% Similarity=0.088 Sum_probs=21.9
Q ss_pred HHHHHHHhHHHHHHHhhhc-ccEEeec
Q psy5049 3 LISVLAQNTRYFRRKLNRL-GLILYVL 28 (153)
Q Consensus 3 ~~~~~~~~~~~~~~~l~~~-g~~~~~~ 28 (153)
.+++..+|.+||++.|++. ||.+++.
T Consensus 381 ~~~~~~~~a~~l~~~L~~~~g~~~~~~ 407 (481)
T 4e1o_A 381 HVRHGTEMAKYFESLVRNDPSFEIPAK 407 (481)
T ss_dssp HHHHHHHHHHHHHHHHHTCTTEECCSC
T ss_pred HHHHHHHHHHHHHHHHhcCCCeEEecC
Confidence 4677889999999999998 9998543
No 262
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=33.71 E-value=33 Score=26.68 Aligned_cols=26 Identities=23% Similarity=0.174 Sum_probs=21.7
Q ss_pred HHHHHHHhHHHHHHHhhhcccEEeec
Q psy5049 3 LISVLAQNTRYFRRKLNRLGLILYVL 28 (153)
Q Consensus 3 ~~~~~~~~~~~~~~~l~~~g~~~~~~ 28 (153)
..+++.++.+|+++.|.+.|+.+++.
T Consensus 267 ~~~~~~~~~~~l~~~L~~~g~~~~~~ 292 (384)
T 3zrp_A 267 RIKRHTMVASAIRAGLEALGLEIVAR 292 (384)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCBSCS
T ss_pred HHHHHHHHHHHHHHHHHHCCCeEccC
Confidence 45678889999999999999987654
No 263
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=33.53 E-value=44 Score=26.17 Aligned_cols=25 Identities=16% Similarity=0.315 Sum_probs=20.8
Q ss_pred HHHHHHHhHHHHHHHhhhcccEEee
Q psy5049 3 LISVLAQNTRYFRRKLNRLGLILYV 27 (153)
Q Consensus 3 ~~~~~~~~~~~~~~~l~~~g~~~~~ 27 (153)
..+++.++++||+++|.++|+.+++
T Consensus 271 ~~~~~~~~~~~l~~~L~~~g~~~~~ 295 (392)
T 2z9v_A 271 VWARHALTAKAMRAGVTAMGLSVWA 295 (392)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCBSS
T ss_pred HHHHHHHHHHHHHHHHHHcCCeecc
Confidence 3567788999999999999988755
No 264
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=33.49 E-value=44 Score=27.87 Aligned_cols=26 Identities=12% Similarity=-0.013 Sum_probs=21.8
Q ss_pred HHHHHHHhHHHHHHHhhhc-ccEEeec
Q psy5049 3 LISVLAQNTRYFRRKLNRL-GLILYVL 28 (153)
Q Consensus 3 ~~~~~~~~~~~~~~~l~~~-g~~~~~~ 28 (153)
.+++..++.+||+++|.+. ||.+++.
T Consensus 395 ~~~~~~~~a~~l~~~L~~~~~~~~~~~ 421 (497)
T 2qma_A 395 MYDHLLAQTLEVADMIRTNDQFELLAE 421 (497)
T ss_dssp HHHHHHHHHHHHHHHHHTCTTEEECSC
T ss_pred HHHHHHHHHHHHHHHHhhCCCeEEEcC
Confidence 4667889999999999997 9998654
No 265
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=33.34 E-value=45 Score=26.14 Aligned_cols=26 Identities=27% Similarity=0.342 Sum_probs=21.5
Q ss_pred HHHHHHHhHHHHHHHhhhcccEEeec
Q psy5049 3 LISVLAQNTRYFRRKLNRLGLILYVL 28 (153)
Q Consensus 3 ~~~~~~~~~~~~~~~l~~~g~~~~~~ 28 (153)
..+++.++++|++++|.++|+.+++.
T Consensus 284 ~~~~~~~~~~~l~~~L~~~g~~~~~~ 309 (393)
T 2huf_A 284 LIARHEDCAKRLYRGLQDAGFELYAD 309 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCBSSC
T ss_pred HHHHHHHHHHHHHHHHHHcCCeeccC
Confidence 35678899999999999999987653
No 266
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=33.02 E-value=1.2e+02 Score=25.40 Aligned_cols=79 Identities=8% Similarity=-0.149 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCcccC---CCCCCeEEEEcCCchHHHhcc--ccccCCCCCCCCceEEEEeeCCCCHHHH
Q psy5049 48 RRISVLAHNTRYFRRKLNRLGLIVYG---HRDSPVVPVLVFFFSKVGQTS--IGLGVEQTALNDGLSLYESSHLRSANLW 122 (153)
Q Consensus 48 ~rr~~L~~ni~~fr~~L~~~G~~~~~---~s~SPIiPV~~g~~~~~~~~a--~~i~~PtVP~g~~RlRI~lsA~HT~edI 122 (153)
..++++.++-..+.+.|++.|..... ..+.- +..++|-+....+.. -.| | .||-| ||++. ..+++.|
T Consensus 332 ~m~~r~~~~R~~l~~~L~~~g~~~~~~~i~~q~G-mF~~~gls~e~v~~L~e~~V-y-~~~~g----Ris~A-gl~~~ni 403 (420)
T 4h51_A 332 AMAERIRTMRRTVYDELLRLQTPGSWEHVINQIG-MFSFLGLSKAQCEYCQNHNI-F-ITVSG----RANMA-GLTHETA 403 (420)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCSSCCTHHHHCCS-SEEECCCCHHHHHHHHHTTE-E-CCTTC----EEEGG-GCCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCCCeecCCCc-eEEecCcCHHHHHHHHhCCE-E-EcCCC----EEEec-cCCHHHH
Confidence 44666667777777888887743100 00011 224455444333333 111 1 12333 88875 5789999
Q ss_pred HHHHHHHHHHHHh
Q psy5049 123 NRPHSPSLMAVFR 135 (153)
Q Consensus 123 d~L~~~~L~~~~~ 135 (153)
+++++ ++.++.+
T Consensus 404 ~~~a~-aI~~vvr 415 (420)
T 4h51_A 404 LMLAQ-TINDAVR 415 (420)
T ss_dssp HHHHH-HHHHHHC
T ss_pred HHHHH-HHHHHHH
Confidence 99988 7765543
No 267
>3m21_A Probable tautomerase HP_0924; 4-oxalocrotonate tautomerase, catalytic proline, hexamer, BE beta, isomerase; 1.90A {Helicobacter pylori} PDB: 2orm_A
Probab=32.48 E-value=59 Score=19.72 Aligned_cols=31 Identities=0% Similarity=-0.305 Sum_probs=23.7
Q ss_pred eEEEEeeC---CCCHHHHHHHHHHHHHHHHhcCC
Q psy5049 108 LSLYESSH---LRSANLWNRPHSPSLMAVFRGGG 138 (153)
Q Consensus 108 RlRI~lsA---~HT~edId~L~~~~L~~~~~~~~ 138 (153)
-++|.+.. ..|+|+-.+|++.+.+.+.+..+
T Consensus 2 ~i~I~~~~~~~grs~eqK~~l~~~lt~~l~~~lg 35 (67)
T 3m21_A 2 FINIKLVPENGGPTNEQKQQLIEGVSDLMVKVLN 35 (67)
T ss_dssp EEEEEECCBTTBSCHHHHHHHHHHHHHHHHHHHC
T ss_pred EEEEEEecCCCCCCHHHHHHHHHHHHHHHHHHHC
Confidence 57889998 89999999999944456655533
No 268
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=32.38 E-value=34 Score=27.75 Aligned_cols=26 Identities=15% Similarity=0.418 Sum_probs=22.1
Q ss_pred HHHHHHHhHHHHHHHhhhcccEEeec
Q psy5049 3 LISVLAQNTRYFRRKLNRLGLILYVL 28 (153)
Q Consensus 3 ~~~~~~~~~~~~~~~l~~~g~~~~~~ 28 (153)
..+++.+|.+||++.|.+.|+.+++.
T Consensus 346 ~~~~~~~~~~~l~~~L~~~g~~~~~~ 371 (449)
T 3qgu_A 346 MIKFYKENAQILKTTFTEMGFSVYGG 371 (449)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCEEES
T ss_pred HHHHHHHHHHHHHHHHHHCCCeeeCC
Confidence 45678899999999999999988654
No 269
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=31.66 E-value=36 Score=25.97 Aligned_cols=25 Identities=12% Similarity=0.050 Sum_probs=21.4
Q ss_pred HHHHHHHhHHHHHHHhhhcccEEee
Q psy5049 3 LISVLAQNTRYFRRKLNRLGLILYV 27 (153)
Q Consensus 3 ~~~~~~~~~~~~~~~l~~~g~~~~~ 27 (153)
..+++.+++++++++|++.|+.+++
T Consensus 256 ~~~~~~~~~~~l~~~L~~~g~~~~~ 280 (353)
T 2yrr_A 256 RERRAREVYAWVLEELKARGFRPYP 280 (353)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCEESC
T ss_pred HHHHHHHHHHHHHHHHHHCCCcccc
Confidence 3567889999999999999999865
No 270
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=30.98 E-value=2.2e+02 Score=23.28 Aligned_cols=111 Identities=15% Similarity=0.051 Sum_probs=59.4
Q ss_pred HHHHHHHhhhcccEEeecCCCCCCCCcccccccccchHHHHHHHH------HHHHHHHHHHhCCCcccCCCCCCeEEEEc
Q psy5049 11 TRYFRRKLNRLGLILYVLFQAQTKPPRSHCICFISGIRRISVLAH------NTRYFRRKLNRLGLIVYGHRDSPVVPVLV 84 (153)
Q Consensus 11 ~~~~~~~l~~~g~~~~~~~~~~~~p~~~~~l~~~~~~~rr~~L~~------ni~~fr~~L~~~G~~~~~~s~SPIiPV~~ 84 (153)
+.+|=+.|+.+||. |- .++|- .+......|+.|.+ ....+-+..+++|+.+. +++
T Consensus 110 ~g~~Le~lk~~Gf~--Gv---~N~pt-----vglidG~fr~~LEE~gm~~~~eve~I~~A~~~gL~Ti---------~~v 170 (286)
T 2p10_A 110 MSTFLRELKEIGFA--GV---QNFPT-----VGLIDGLFRQNLEETGMSYAQEVEMIAEAHKLDLLTT---------PYV 170 (286)
T ss_dssp HHHHHHHHHHHTCC--EE---EECSC-----GGGCCHHHHHHHHHTTCCHHHHHHHHHHHHHTTCEEC---------CEE
T ss_pred HHHHHHHHHHhCCc--eE---EECCC-----cccccchhhhhHhhcCCCHHHHHHHHHHHHHCCCeEE---------Eec
Confidence 44566999999998 53 35662 12223555666553 23334455677787542 345
Q ss_pred CCchHHHhcc------ccccCCCCCCCCceEEEEeeCCCCHHH-HHHHHHHHHHHHHhcCCCceeeecc
Q psy5049 85 FFFSKVGQTS------IGLGVEQTALNDGLSLYESSHLRSANL-WNRPHSPSLMAVFRGGGPGIFPLQH 146 (153)
Q Consensus 85 g~~~~~~~~a------~~i~~PtVP~g~~RlRI~lsA~HT~ed-Id~L~~~~L~~~~~~~~~~~~~~~~ 146 (153)
.+.+.+.+++ .++.+|.+-.+. |-.....|.+| .+.+-+ ..+++.++ .|.++-|+|
T Consensus 171 ~~~eeA~amA~agpDiI~~h~glT~ggl----IG~~~avs~~~~~e~i~~-i~~a~~~v-npdvivLc~ 233 (286)
T 2p10_A 171 FSPEDAVAMAKAGADILVCHMGLTTGGA----IGARSGKSMDDCVSLINE-CIEAARTI-RDDIIILSH 233 (286)
T ss_dssp CSHHHHHHHHHHTCSEEEEECSCC-------------CCCHHHHHHHHHH-HHHHHHHH-CSCCEEEEE
T ss_pred CCHHHHHHHHHcCCCEEEECCCCCCCCc----ccCCCcccHHHhHHHHHH-HHHHHHHh-CCCcEEEec
Confidence 6667666665 455566433221 22234467777 555444 55566554 456666665
No 271
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=30.86 E-value=73 Score=24.62 Aligned_cols=26 Identities=8% Similarity=-0.018 Sum_probs=21.7
Q ss_pred HHHHHHHhHHHHHHHhhhc-ccEEeec
Q psy5049 3 LISVLAQNTRYFRRKLNRL-GLILYVL 28 (153)
Q Consensus 3 ~~~~~~~~~~~~~~~l~~~-g~~~~~~ 28 (153)
.+++..+|.+||+++|.++ |+.+++.
T Consensus 249 ~~~~~~~~~~~l~~~L~~~~~~~~~~~ 275 (375)
T 2fnu_A 249 LMQKREEAALTYDRIFKDNPYFTPLHP 275 (375)
T ss_dssp HHHHHHHHHHHHHHHHTTCSSEEESGG
T ss_pred HHHHHHHHHHHHHHHhhcCCCccccCC
Confidence 4567889999999999998 8888654
No 272
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=30.39 E-value=1.8e+02 Score=24.30 Aligned_cols=25 Identities=16% Similarity=0.093 Sum_probs=19.4
Q ss_pred CceEEEEeeCCCCHHHHHHHHHHHHHHHHh
Q psy5049 106 DGLSLYESSHLRSANLWNRPHSPSLMAVFR 135 (153)
Q Consensus 106 ~~RlRI~lsA~HT~edId~L~~~~L~~~~~ 135 (153)
...+|+++.. ||++.+++ .|+...+
T Consensus 436 ~~~iRlsvg~----edi~~li~-~L~~al~ 460 (464)
T 1ibj_A 436 EDLVRISAGI----EDVDDLIS-DLDIAFK 460 (464)
T ss_dssp TTCEEEECCS----SCHHHHHH-HHHHHHH
T ss_pred cCeEEEEeCC----CCHHHHHH-HHHHHHh
Confidence 5689999997 88888888 6665544
No 273
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=29.58 E-value=57 Score=25.37 Aligned_cols=24 Identities=4% Similarity=0.048 Sum_probs=19.1
Q ss_pred HHHHHHHhHHHHHHHhhhcc--cEEe
Q psy5049 3 LISVLAQNTRYFRRKLNRLG--LILY 26 (153)
Q Consensus 3 ~~~~~~~~~~~~~~~l~~~g--~~~~ 26 (153)
.+++..++.++|++.|...| +.+.
T Consensus 250 ~~~~~~~~~~~l~~~l~~~~~~~~~~ 275 (374)
T 3uwc_A 250 ITEKRRGIAHLYDQSFVDLSEFIDVP 275 (374)
T ss_dssp HHHHHHHHHHHHHHHTGGGTTTEECC
T ss_pred HHHHHHHHHHHHHHHhccCCCeEEec
Confidence 34677889999999999987 6653
No 274
>3mb2_A 4-oxalocrotonate tautomerase family enzyme - ALPH; trans-3-chloroacrylic acid dehalogenase, CAAD, dehalogenase, hydrolase; 2.41A {Chloroflexus aurantiacus}
Probab=29.47 E-value=82 Score=19.37 Aligned_cols=31 Identities=13% Similarity=-0.240 Sum_probs=23.8
Q ss_pred ceEEEEeeCCCCHHHHHHHHHHHHHHHHhcC
Q psy5049 107 GLSLYESSHLRSANLWNRPHSPSLMAVFRGG 137 (153)
Q Consensus 107 ~RlRI~lsA~HT~edId~L~~~~L~~~~~~~ 137 (153)
+-+.|.+....|+|+-..|++.+.+.+.+..
T Consensus 2 P~I~I~~~~grs~eqK~~L~~~it~~l~~~l 32 (72)
T 3mb2_A 2 LLLRITMLEGRSTEQKAELARALSAAAAAAF 32 (72)
T ss_dssp EEEEEEEESCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEcCCCCHHHHHHHHHHHHHHHHHHh
Confidence 3578888999999999999994445665543
No 275
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=29.22 E-value=55 Score=25.42 Aligned_cols=25 Identities=12% Similarity=0.373 Sum_probs=21.2
Q ss_pred HHHHHHHhHHHHHHHhhhcccEEee
Q psy5049 3 LISVLAQNTRYFRRKLNRLGLILYV 27 (153)
Q Consensus 3 ~~~~~~~~~~~~~~~l~~~g~~~~~ 27 (153)
..+++.++++++++.|.+.|+.+++
T Consensus 282 ~~~~~~~~~~~l~~~L~~~g~~~~~ 306 (386)
T 2dr1_A 282 WLEMYEKRAKMVREGVREIGLDILA 306 (386)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCBSS
T ss_pred HHHHHHHHHHHHHHHHHHcCCeeCc
Confidence 4567889999999999999988755
No 276
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=28.93 E-value=71 Score=24.85 Aligned_cols=24 Identities=13% Similarity=0.314 Sum_probs=20.5
Q ss_pred HHHHHHHhHHHHHHHhhhcccEEe
Q psy5049 3 LISVLAQNTRYFRRKLNRLGLILY 26 (153)
Q Consensus 3 ~~~~~~~~~~~~~~~l~~~g~~~~ 26 (153)
..++++++.++|++.|.+.|+.++
T Consensus 266 ~~~~~~~~~~~l~~~L~~~~~~~~ 289 (360)
T 3hdo_A 266 CCRRIRETREWFTTELRSIGYDVI 289 (360)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCEEC
T ss_pred HHHHHHHHHHHHHHHHHHCCCEEc
Confidence 456788999999999999998864
No 277
>1otf_A 4-oxalocrotonate tautomerase; isomerase; 1.90A {Pseudomonas SP} SCOP: d.80.1.1 PDB: 4otc_A 4ota_A 4otb_A 1bjp_A 2fm7_A
Probab=28.78 E-value=89 Score=18.06 Aligned_cols=30 Identities=7% Similarity=-0.192 Sum_probs=23.3
Q ss_pred eEEEEeeCCCCHHHHHHHHHHHHHHHHhcC
Q psy5049 108 LSLYESSHLRSANLWNRPHSPSLMAVFRGG 137 (153)
Q Consensus 108 RlRI~lsA~HT~edId~L~~~~L~~~~~~~ 137 (153)
-++|.+....|+|+-.++.+...+.+.+.+
T Consensus 2 ~i~I~~~~grs~e~k~~l~~~i~~~l~~~l 31 (62)
T 1otf_A 2 IAQLYIIEGRTDEQKETLIRQVSEAMANSL 31 (62)
T ss_dssp EEEEEEESCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEcCCCCHHHHHHHHHHHHHHHHHHh
Confidence 478888888999999999995556666653
No 278
>1jr5_A 10 kDa anti-sigma factor; all-alpha, helix-turn-helix, coiled-coil, transcription; NMR {Enterobacteria phage T4} SCOP: a.150.1.1 PDB: 1tkv_A 1tl6_A 1tlh_A
Probab=28.71 E-value=22 Score=24.51 Aligned_cols=24 Identities=21% Similarity=0.181 Sum_probs=21.5
Q ss_pred HHHHHhHHHHHHHhhhcccEEeec
Q psy5049 5 SVLAQNTRYFRRKLNRLGLILYVL 28 (153)
Q Consensus 5 ~~~~~~~~~~~~~l~~~g~~~~~~ 28 (153)
+++.+|.+-|=.-|+.+||++.|.
T Consensus 24 ddIle~q~~FIaFLNElG~t~~G~ 47 (90)
T 1jr5_A 24 EDIVENRANFIAFLNEIGVTHEGR 47 (90)
T ss_dssp HHHHTCHHHHHHHHHHHTCCSSSS
T ss_pred HHHHHhHHHHHHHHHHcCCCCCcc
Confidence 478899999999999999998775
No 279
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=28.45 E-value=38 Score=27.69 Aligned_cols=25 Identities=8% Similarity=0.024 Sum_probs=21.1
Q ss_pred HHHHHHhHHHHHHHhhhc-ccEEeec
Q psy5049 4 ISVLAQNTRYFRRKLNRL-GLILYVL 28 (153)
Q Consensus 4 ~~~~~~~~~~~~~~l~~~-g~~~~~~ 28 (153)
.++..++++|++++|.+. ||.+++.
T Consensus 346 ~~~~~~~~~~l~~~L~~~~g~~~~~~ 371 (438)
T 1wyu_A 346 ALKSVEMAHKLHALLLEVPGVRPFTP 371 (438)
T ss_dssp HHHHHHHHHHHHHHHTTSTTCEECSC
T ss_pred HHHHHHHHHHHHHHHhcCCCeEECCC
Confidence 456788999999999998 9998653
No 280
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=28.38 E-value=1.2e+02 Score=25.29 Aligned_cols=26 Identities=8% Similarity=0.082 Sum_probs=21.8
Q ss_pred HHHHHHHhHHHHHHHhhhcccEEeec
Q psy5049 3 LISVLAQNTRYFRRKLNRLGLILYVL 28 (153)
Q Consensus 3 ~~~~~~~~~~~~~~~l~~~g~~~~~~ 28 (153)
...+..+|..++++.|.++||.||-.
T Consensus 300 r~~~~~~~a~~la~~L~~~g~~V~p~ 325 (427)
T 3hvy_A 300 VTIEAVKGAVFCARIMELAGFDVLPK 325 (427)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCEEESC
T ss_pred HHHHHHHHHHHHHHHHHhCCCeecCC
Confidence 35678899999999999999988543
No 281
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=28.17 E-value=81 Score=24.79 Aligned_cols=25 Identities=20% Similarity=0.118 Sum_probs=20.2
Q ss_pred HHHHHHhHHHHHHHhhhc-ccEEeec
Q psy5049 4 ISVLAQNTRYFRRKLNRL-GLILYVL 28 (153)
Q Consensus 4 ~~~~~~~~~~~~~~l~~~-g~~~~~~ 28 (153)
.+++.++.+|++++|.++ |+.+++.
T Consensus 305 ~~~~~~~~~~l~~~L~~~~~~~~~~~ 330 (406)
T 3cai_A 305 DAYLNRVFDYLMVSLRSLPLVMLIGR 330 (406)
T ss_dssp HHHHHHHHHHHHHHHHTCTTEEECCC
T ss_pred HHHHHHHHHHHHHHHhcCCCeEEcCC
Confidence 456778999999999997 8887653
No 282
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=27.99 E-value=42 Score=26.43 Aligned_cols=26 Identities=15% Similarity=0.180 Sum_probs=22.2
Q ss_pred HHHHHHHhHHHHHHHhhhcccEEeec
Q psy5049 3 LISVLAQNTRYFRRKLNRLGLILYVL 28 (153)
Q Consensus 3 ~~~~~~~~~~~~~~~l~~~g~~~~~~ 28 (153)
..+++.+|.+|++++|.++|+.+++.
T Consensus 281 ~~~~~~~~~~~l~~~L~~~g~~~~~~ 306 (405)
T 2vi8_A 281 YAKRVVDNAKRLASALQNEGFTLVSG 306 (405)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCEEGGG
T ss_pred HHHHHHHHHHHHHHHHHhCCCeEecC
Confidence 45678899999999999999998754
No 283
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=27.65 E-value=83 Score=24.67 Aligned_cols=26 Identities=19% Similarity=0.175 Sum_probs=21.6
Q ss_pred HHHHHHHhHHHHHHHhhhc-ccEEeec
Q psy5049 3 LISVLAQNTRYFRRKLNRL-GLILYVL 28 (153)
Q Consensus 3 ~~~~~~~~~~~~~~~l~~~-g~~~~~~ 28 (153)
.+++..+|.+||++.|.++ |+.+++.
T Consensus 255 ~~~~~~~~~~~l~~~L~~~~~~~~~~~ 281 (388)
T 1b9h_A 255 QIAVRDERWTLLSRLLGAIDGVVPQGG 281 (388)
T ss_dssp HHHHHHHHHHHHHHHHHTSTTCEECCC
T ss_pred HHHHHHHHHHHHHHHhccCCCccccCC
Confidence 4567788999999999998 8988764
No 284
>1gyx_A YDCE, B1461, hypothetical protein YDCE; tautomerase, isomerase, complete proteo; HET: EPE; 1.35A {Escherichia coli} SCOP: d.80.1.1 PDB: 1gyj_A* 1gyy_A*
Probab=27.59 E-value=86 Score=19.54 Aligned_cols=31 Identities=3% Similarity=-0.243 Sum_probs=23.5
Q ss_pred eEEEEeeCCC-CHHHHHHHHHHHHHHHHhcCC
Q psy5049 108 LSLYESSHLR-SANLWNRPHSPSLMAVFRGGG 138 (153)
Q Consensus 108 RlRI~lsA~H-T~edId~L~~~~L~~~~~~~~ 138 (153)
-++|.+.... |.|+-.++.+...+.+.+.+|
T Consensus 2 ~I~I~l~~Grls~eqk~~L~~~l~~~l~~~lg 33 (76)
T 1gyx_A 2 HIDIKCFPRELDEQQKAALAADITDVIIRHLN 33 (76)
T ss_dssp EEEEEESCCCCCHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHHHHHhC
Confidence 4788888887 999999999855556666533
No 285
>3ej9_A Alpha-subunit of trans-3-chloroacrylic acid dehal; trans-3-chloroacrylic acid dehalogenase, CAAD, dehalogenase, isomerase, hydrolase; 1.50A {Pseudomonas pavonaceae} SCOP: d.80.1.1 PDB: 3ej3_A 1s0y_A 3ej7_A
Probab=27.32 E-value=94 Score=19.51 Aligned_cols=32 Identities=9% Similarity=-0.032 Sum_probs=24.5
Q ss_pred ceEEEEeeCCCCHHHHHHHHHHHHHHHHhcCC
Q psy5049 107 GLSLYESSHLRSANLWNRPHSPSLMAVFRGGG 138 (153)
Q Consensus 107 ~RlRI~lsA~HT~edId~L~~~~L~~~~~~~~ 138 (153)
+-++|.+....|.|+-.+|++...+.+.+..|
T Consensus 2 P~I~I~~~~Grs~eqK~~L~~~it~~l~~~lg 33 (76)
T 3ej9_A 2 PMISCDMRYGRTDEQKRALSAGLLRVISEATG 33 (76)
T ss_dssp CEEEEEEETTCCHHHHHHHHHHHHHHHHHHHC
T ss_pred CEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHC
Confidence 45789999999999999999944456655533
No 286
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=27.18 E-value=48 Score=25.38 Aligned_cols=25 Identities=12% Similarity=-0.064 Sum_probs=21.1
Q ss_pred HHHHHHHhHHHHHHHhhhcccEEee
Q psy5049 3 LISVLAQNTRYFRRKLNRLGLILYV 27 (153)
Q Consensus 3 ~~~~~~~~~~~~~~~l~~~g~~~~~ 27 (153)
..+++.++.+|+++.|+++|+.+++
T Consensus 253 ~~~~~~~~~~~l~~~L~~~g~~~~~ 277 (352)
T 1iug_A 253 HLALKAWQNALLYGVGEEGGLRPVP 277 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCEESC
T ss_pred HHHHHHHHHHHHHHHHHHCCCcccc
Confidence 4567889999999999999998754
No 287
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=26.83 E-value=92 Score=24.89 Aligned_cols=26 Identities=12% Similarity=0.301 Sum_probs=21.1
Q ss_pred HHHHHHHhHHHHHHHhhhc-ccEEeec
Q psy5049 3 LISVLAQNTRYFRRKLNRL-GLILYVL 28 (153)
Q Consensus 3 ~~~~~~~~~~~~~~~l~~~-g~~~~~~ 28 (153)
..++..+|.+|+++.|.++ |+.+++.
T Consensus 268 ~~~~~~~~~~~l~~~L~~~~g~~~~~~ 294 (418)
T 2c81_A 268 KNAIREKNAMFLNDALSKIDGIKVMKR 294 (418)
T ss_dssp HHHHHHHHHHHHHHHHTTSTTEEECCC
T ss_pred HHHHHHHHHHHHHHHhccCCCcccCCC
Confidence 3566778899999999988 9998754
No 288
>2x4k_A 4-oxalocrotonate tautomerase; isomerase; 1.10A {Staphylococcus aureus}
Probab=26.08 E-value=98 Score=17.69 Aligned_cols=30 Identities=17% Similarity=-0.097 Sum_probs=23.5
Q ss_pred ceEEEEeeCCCCHHHHHHHHHHHHHHHHhc
Q psy5049 107 GLSLYESSHLRSANLWNRPHSPSLMAVFRG 136 (153)
Q Consensus 107 ~RlRI~lsA~HT~edId~L~~~~L~~~~~~ 136 (153)
+-++|.+....|+|+-.++++.+.+.+.+.
T Consensus 4 P~i~i~~~~g~s~e~k~~l~~~l~~~l~~~ 33 (63)
T 2x4k_A 4 PIVNVKLLEGRSDEQLKNLVSEVTDAVEKT 33 (63)
T ss_dssp CEEEEEEESCCCHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEcCCCCHHHHHHHHHHHHHHHHHH
Confidence 457888889999999999998455566665
No 289
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=26.01 E-value=44 Score=30.42 Aligned_cols=26 Identities=27% Similarity=0.105 Sum_probs=22.8
Q ss_pred HHHHHHHhHHHHHHHhhh--cccEEeec
Q psy5049 3 LISVLAQNTRYFRRKLNR--LGLILYVL 28 (153)
Q Consensus 3 ~~~~~~~~~~~~~~~l~~--~g~~~~~~ 28 (153)
.++++.+|.+|||++|++ .||.+++.
T Consensus 420 ~~~~~~~~a~~lr~~L~~~i~g~~v~~p 447 (730)
T 1c4k_A 420 LWHDLLITTIEARKKLIKAGSMFRPFVP 447 (730)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCSSEESSC
T ss_pred HHHHHHHHHHHHHHHHhhhCCCeEEccc
Confidence 467889999999999998 89999874
No 290
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=25.97 E-value=91 Score=24.37 Aligned_cols=26 Identities=4% Similarity=-0.193 Sum_probs=21.3
Q ss_pred HHHHHHHhHHHHHHHhhhcccEEeec
Q psy5049 3 LISVLAQNTRYFRRKLNRLGLILYVL 28 (153)
Q Consensus 3 ~~~~~~~~~~~~~~~l~~~g~~~~~~ 28 (153)
..+++.++.+||+++|...|+.+++.
T Consensus 285 ~~~~~~~~~~~l~~~L~~~~~~~~~~ 310 (400)
T 3vax_A 285 WQVAAQDLRSRLLAGLASTSFQVNGD 310 (400)
T ss_dssp HHHHHHHHHHHHHHHHTTTTCEECSC
T ss_pred HHHHHHHHHHHHHHhhCCCCEEEeCC
Confidence 45678889999999999779988664
No 291
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=25.89 E-value=48 Score=26.16 Aligned_cols=25 Identities=12% Similarity=0.095 Sum_probs=21.7
Q ss_pred HHHHHHHhHHHHHHHhhhcccEEee
Q psy5049 3 LISVLAQNTRYFRRKLNRLGLILYV 27 (153)
Q Consensus 3 ~~~~~~~~~~~~~~~l~~~g~~~~~ 27 (153)
..+++.+|.+||+++|.+.||.++.
T Consensus 290 ~~~~~~~~~~~l~~~L~~~g~~~~~ 314 (420)
T 3gbx_A 290 YQQQVAKNAKAMVEVFLNRGYKVVS 314 (420)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCEEGG
T ss_pred HHHHHHHHHHHHHHHHHhcCCeecc
Confidence 3577889999999999999999854
No 292
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=25.79 E-value=2.7e+02 Score=22.67 Aligned_cols=22 Identities=14% Similarity=-0.016 Sum_probs=18.3
Q ss_pred chHHHHHHHHHHHHHHHHHHhC
Q psy5049 46 GIRRISVLAHNTRYFRRKLNRL 67 (153)
Q Consensus 46 ~~~rr~~L~~ni~~fr~~L~~~ 67 (153)
-..+.+++.+|..++.+.|.+.
T Consensus 277 l~~r~~~~~~~a~~l~~~L~~~ 298 (414)
T 3ndn_A 277 LAIRVQHSNASAQRIAEFLNGH 298 (414)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHhcC
Confidence 3667788999999999999865
No 293
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=25.73 E-value=39 Score=27.03 Aligned_cols=24 Identities=29% Similarity=0.340 Sum_probs=20.6
Q ss_pred HHHHHHHhHHHHHHHhhhcccEEe
Q psy5049 3 LISVLAQNTRYFRRKLNRLGLILY 26 (153)
Q Consensus 3 ~~~~~~~~~~~~~~~l~~~g~~~~ 26 (153)
..+++.++++||++.|+++||.+.
T Consensus 309 ~~~~~~~~~~~l~~~L~~~g~~~~ 332 (409)
T 3kki_A 309 RRQHLDRMARKLRIGLSQLGLTIR 332 (409)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCCCC
T ss_pred HHHHHHHHHHHHHHHHHHcCCccC
Confidence 346788999999999999999875
No 294
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=25.21 E-value=68 Score=24.87 Aligned_cols=26 Identities=23% Similarity=0.272 Sum_probs=21.0
Q ss_pred HHHHHHHhHHHHHHHhhhcccEEeec
Q psy5049 3 LISVLAQNTRYFRRKLNRLGLILYVL 28 (153)
Q Consensus 3 ~~~~~~~~~~~~~~~l~~~g~~~~~~ 28 (153)
..++..++.+|++++|.++|+.+++.
T Consensus 279 ~~~~~~~~~~~l~~~L~~~~~~~~~~ 304 (376)
T 3f0h_A 279 EVARIASQAADFRAKIKDLPFELVSE 304 (376)
T ss_dssp HHHHHHHHHHHHHHHTTTSSEEECCS
T ss_pred HHHHHHHHHHHHHHHHHHcCCccCcc
Confidence 35567788999999999999987553
No 295
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=25.01 E-value=66 Score=25.01 Aligned_cols=25 Identities=8% Similarity=0.094 Sum_probs=20.5
Q ss_pred HHHHHHHhHHHHHHHhhhcc-c-EEee
Q psy5049 3 LISVLAQNTRYFRRKLNRLG-L-ILYV 27 (153)
Q Consensus 3 ~~~~~~~~~~~~~~~l~~~g-~-~~~~ 27 (153)
..++..++++||+++|.++| | .+++
T Consensus 264 ~~~~~~~~~~~l~~~L~~~~~~~~~~~ 290 (362)
T 2c0r_A 264 VQQANRKKASLIYDAIDQSGGFYRGCV 290 (362)
T ss_dssp HHHHHHHHHHHHHHHHHTSTTSSEESS
T ss_pred HHHHHHHHHHHHHHHHHHcCCccccCC
Confidence 35677889999999999998 6 7754
No 296
>2opa_A Probable tautomerase YWHB; homohexamer, 4-oxalocrotonate tautomerase, inhibitor, 2-FLUO hydroxycinnamate, isomerase; HET: FHC; 2.40A {Bacillus subtilis} PDB: 2op8_A*
Probab=24.74 E-value=1.1e+02 Score=17.66 Aligned_cols=31 Identities=13% Similarity=-0.095 Sum_probs=23.6
Q ss_pred eEEEEeeCCCCHHHHHHHHHHHHHHHHhcCC
Q psy5049 108 LSLYESSHLRSANLWNRPHSPSLMAVFRGGG 138 (153)
Q Consensus 108 RlRI~lsA~HT~edId~L~~~~L~~~~~~~~ 138 (153)
-++|.+....|+|+-.++.+...+.+.+.+|
T Consensus 2 ~i~i~~~~grs~eqk~~l~~~i~~~l~~~lg 32 (61)
T 2opa_A 2 YVTVKMLEGRTDEQKRNLVEKVTEAVKETTG 32 (61)
T ss_dssp EEEEEEESCCCHHHHHHHHHHHHHHHHHHHC
T ss_pred EEEEEEcCCCCHHHHHHHHHHHHHHHHHHhC
Confidence 4678888889999999999955556666533
No 297
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=24.59 E-value=53 Score=25.86 Aligned_cols=26 Identities=15% Similarity=0.250 Sum_probs=22.0
Q ss_pred HHHHHHHhHHHHHHHhhhcccEEeec
Q psy5049 3 LISVLAQNTRYFRRKLNRLGLILYVL 28 (153)
Q Consensus 3 ~~~~~~~~~~~~~~~l~~~g~~~~~~ 28 (153)
..+++.++.+||++.|.+.|+.+++.
T Consensus 282 ~~~~~~~~~~~l~~~L~~~g~~~~~~ 307 (407)
T 2dkj_A 282 YSRLVVENAKRLAEELARRGYRIVTG 307 (407)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCEEGGG
T ss_pred HHHHHHHHHHHHHHHHHhCCceeecC
Confidence 45678899999999999999998653
No 298
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=24.18 E-value=46 Score=25.52 Aligned_cols=26 Identities=19% Similarity=0.130 Sum_probs=21.5
Q ss_pred HHHHHHHhHHHHHHHhhhcccEEeec
Q psy5049 3 LISVLAQNTRYFRRKLNRLGLILYVL 28 (153)
Q Consensus 3 ~~~~~~~~~~~~~~~l~~~g~~~~~~ 28 (153)
..+++.++.+|++++|.+.|+.+++.
T Consensus 267 ~~~~~~~~~~~l~~~L~~~~~~~~~~ 292 (366)
T 1m32_A 267 RHQRYQQNQRSLVAGMRALGFNTLLD 292 (366)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCBSSC
T ss_pred HHHHHHHHHHHHHHHHHHCCCeeccC
Confidence 45678899999999999999887553
No 299
>2juz_A UPF0352 protein HI0840; homodimer, helix, structural genomics, PSI-2, protein structure initiative; NMR {Haemophilus influenzae} SCOP: a.284.1.1
Probab=24.09 E-value=51 Score=22.16 Aligned_cols=32 Identities=9% Similarity=-0.024 Sum_probs=25.4
Q ss_pred eeCCCCHHHHHHHHHHHHHHHHhcCCCceeee
Q psy5049 113 SSHLRSANLWNRPHSPSLMAVFRGGGPGIFPL 144 (153)
Q Consensus 113 lsA~HT~edId~L~~~~L~~~~~~~~~~~~~~ 144 (153)
+++-.+.++++++++..+..+.+...|.=|+|
T Consensus 3 i~SKYsd~qvE~ll~eli~VLEKH~Ap~DLSL 34 (80)
T 2juz_A 3 QHSKYSDAQLSAIVNDMIAVLEKHKAPVDLSL 34 (80)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHHHTCCSHHHH
T ss_pred ccccccHHHHHHHHHHHHHHHHhcCCCccHHH
Confidence 45778999999999878888888777765554
No 300
>2jr2_A UPF0352 protein CPS_2611; dimer, all alpha helix, homodimer, structural genomics, PSI, structure initiative; NMR {Colwellia psychrerythraea} SCOP: a.284.1.1 PDB: 2ota_A
Probab=23.77 E-value=47 Score=22.12 Aligned_cols=32 Identities=9% Similarity=-0.111 Sum_probs=25.1
Q ss_pred eeCCCCHHHHHHHHHHHHHHHHhcCCCceeee
Q psy5049 113 SSHLRSANLWNRPHSPSLMAVFRGGGPGIFPL 144 (153)
Q Consensus 113 lsA~HT~edId~L~~~~L~~~~~~~~~~~~~~ 144 (153)
+++-.+.++++++++..+..+.+...|.=|+|
T Consensus 3 i~SKYsd~qvE~ll~eli~VLEKH~Ap~DLSL 34 (76)
T 2jr2_A 3 IVSKYSNERVEKIIQDLLDVLVKEEVTPDLAL 34 (76)
T ss_dssp CSCCSCHHHHHHHHHHHHHHHHHHTCCHHHHH
T ss_pred ccccccHHHHHHHHHHHHHHHHhcCCCccHHH
Confidence 45678999999999878888887777765554
No 301
>2fi0_A Conserved domain protein; structural genomics,streptococcus pneumoniae, PSI, protein S initiative; 2.10A {Streptococcus pneumoniae} SCOP: a.248.1.1
Probab=23.67 E-value=41 Score=21.87 Aligned_cols=17 Identities=24% Similarity=0.167 Sum_probs=14.2
Q ss_pred HHHHHHhhhcccEEeec
Q psy5049 12 RYFRRKLNRLGLILYVL 28 (153)
Q Consensus 12 ~~~~~~l~~~g~~~~~~ 28 (153)
.-|-++|+..||.|.|+
T Consensus 64 d~l~~~L~~~g~~~~~~ 80 (81)
T 2fi0_A 64 DKIVRTLEANGYEVIGL 80 (81)
T ss_dssp HHHHHHHHHTTCEEECC
T ss_pred HHHHHHHHHcCCEeeCC
Confidence 34889999999999765
No 302
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=23.63 E-value=47 Score=26.10 Aligned_cols=25 Identities=28% Similarity=0.417 Sum_probs=21.3
Q ss_pred HHHHHHHhHHHHHHHhhhcccEEee
Q psy5049 3 LISVLAQNTRYFRRKLNRLGLILYV 27 (153)
Q Consensus 3 ~~~~~~~~~~~~~~~l~~~g~~~~~ 27 (153)
..+++.++.+||+++|.++|+.+++
T Consensus 296 ~~~~~~~~~~~l~~~L~~~g~~~~~ 320 (393)
T 1vjo_A 296 CWQRHQKNVEYLWERLEDIGLSLHV 320 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCBSS
T ss_pred HHHHHHHHHHHHHHHHHHcCCcccC
Confidence 4567889999999999999998765
No 303
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=23.56 E-value=87 Score=26.18 Aligned_cols=26 Identities=19% Similarity=0.165 Sum_probs=22.1
Q ss_pred HHHHHHHhHHHHHHHhhhcccEEeec
Q psy5049 3 LISVLAQNTRYFRRKLNRLGLILYVL 28 (153)
Q Consensus 3 ~~~~~~~~~~~~~~~l~~~g~~~~~~ 28 (153)
..+++.+|.+++.++|.+.||.+.+.
T Consensus 326 ~~~~~~~~~~~l~~~L~~~g~~~~~~ 351 (483)
T 1rv3_A 326 YQRQVVANCRALSAALVELGYKIVTG 351 (483)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCEEGGG
T ss_pred HHHHHHHHHHHHHHHHHhcCCEeccC
Confidence 35678899999999999999998653
No 304
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=23.53 E-value=74 Score=25.27 Aligned_cols=26 Identities=19% Similarity=0.330 Sum_probs=22.1
Q ss_pred hHHHHHHHhHHHHHHHhhhcccEEee
Q psy5049 2 RLISVLAQNTRYFRRKLNRLGLILYV 27 (153)
Q Consensus 2 ~~~~~~~~~~~~~~~~l~~~g~~~~~ 27 (153)
+..+.+.++.+++++.|.+.|+.+++
T Consensus 296 ~~~~~~~~~~~~l~~~L~~~g~~~~~ 321 (400)
T 3asa_A 296 EAIHYYRENSDLLRKALLATGFEVFG 321 (400)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHCCCeeeC
Confidence 34577889999999999999998865
No 305
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=23.43 E-value=48 Score=26.26 Aligned_cols=25 Identities=16% Similarity=0.304 Sum_probs=21.4
Q ss_pred HHHHHHHhHHHHHHHhhhcccEEee
Q psy5049 3 LISVLAQNTRYFRRKLNRLGLILYV 27 (153)
Q Consensus 3 ~~~~~~~~~~~~~~~l~~~g~~~~~ 27 (153)
..+++.++++|++++|.+.|+.+++
T Consensus 303 ~~~~~~~~~~~l~~~L~~~g~~~~~ 327 (401)
T 2bwn_A 303 LRDAQQMHAKVLKMRLKALGMPIID 327 (401)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCBCC
T ss_pred HHHHHHHHHHHHHHHHHHCCCcccC
Confidence 4567889999999999999998765
No 306
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=23.41 E-value=58 Score=26.92 Aligned_cols=55 Identities=16% Similarity=0.174 Sum_probs=34.4
Q ss_pred HHHHHHHhHHHHHHHhhhc--ccEEeecCCCCCCCCcccccccccchHHHHHHHHHHHHHHHHHHhCCCcc
Q psy5049 3 LISVLAQNTRYFRRKLNRL--GLILYVLFQAQTKPPRSHCICFISGIRRISVLAHNTRYFRRKLNRLGLIV 71 (153)
Q Consensus 3 ~~~~~~~~~~~~~~~l~~~--g~~~~~~~~~~~~p~~~~~l~~~~~~~rr~~L~~ni~~fr~~L~~~G~~~ 71 (153)
.+++..+|.+|++++|.+. ||.+++. |- .+++.-.... .....+.+.|.+.|+.+
T Consensus 346 ~~~~~~~~~~~l~~~L~~~~~g~~~~~~------~~-~~~v~~~~~~-------~~~~~l~~~L~~~Gi~v 402 (497)
T 3mc6_A 346 SCQEIVGAAMKFKKYIQENIPDLDIMGN------PR-YSVISFSSKT-------LNIHELSDRLSKKGWHF 402 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTCEECSC------CC-SSEEEEECTT-------TTHHHHHHHHHTTTCBC
T ss_pred HHHHHHHHHHHHHHHHHhcCCCEEEecC------CC-eeEEEEeCCC-------CCHHHHHHHHHhCCEEE
Confidence 4667889999999999996 9998654 21 2222111111 12345677777788754
No 307
>2juw_A UPF0352 protein SO_2176; homodimer, helix, dimer, all alpha, northeast structural GEN consortium, NESG, structural genomics; NMR {Shewanella oneidensis} SCOP: a.284.1.1 PDB: 2qti_A
Probab=23.40 E-value=53 Score=22.08 Aligned_cols=32 Identities=13% Similarity=0.012 Sum_probs=25.4
Q ss_pred eeCCCCHHHHHHHHHHHHHHHHhcCCCceeee
Q psy5049 113 SSHLRSANLWNRPHSPSLMAVFRGGGPGIFPL 144 (153)
Q Consensus 113 lsA~HT~edId~L~~~~L~~~~~~~~~~~~~~ 144 (153)
+++-.+.++++++++..+..+.+...|.=|+|
T Consensus 3 i~SKYsd~qvE~ll~eli~VLEKH~Ap~DLSL 34 (80)
T 2juw_A 3 IQSKYSNTQVESLIAEILVVLEKHKAPTDLSL 34 (80)
T ss_dssp CCCSSCHHHHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred ccccccHHHHHHHHHHHHHHHHhcCCCccHHH
Confidence 45678999999999878888888777765554
No 308
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=23.08 E-value=1e+02 Score=25.92 Aligned_cols=25 Identities=12% Similarity=0.175 Sum_probs=21.0
Q ss_pred HHHHHHHhHHHHHHHhhhcc-cEEee
Q psy5049 3 LISVLAQNTRYFRRKLNRLG-LILYV 27 (153)
Q Consensus 3 ~~~~~~~~~~~~~~~l~~~g-~~~~~ 27 (153)
.+++..+|.+||+++|.++| |.+++
T Consensus 343 ~~~~~~~~a~~l~~~L~~~~~~~~~~ 368 (502)
T 3hbx_A 343 VMENCRENMIVLREGLEKTERFNIVS 368 (502)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCEEECS
T ss_pred HHHHHHHHHHHHHHHHHhCCCEEEEe
Confidence 45677889999999999997 98854
No 309
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=23.08 E-value=61 Score=25.42 Aligned_cols=25 Identities=24% Similarity=0.351 Sum_probs=21.2
Q ss_pred HHHHHHHhHHHHHHHhhhcccEEee
Q psy5049 3 LISVLAQNTRYFRRKLNRLGLILYV 27 (153)
Q Consensus 3 ~~~~~~~~~~~~~~~l~~~g~~~~~ 27 (153)
..+++.++.+|+++.|++.|+.+++
T Consensus 279 ~~~~~~~~~~~l~~~L~~~g~~~~~ 303 (381)
T 1v2d_A 279 LREGYRRRRDLLAGGLRAMGLRVYV 303 (381)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCEEC
T ss_pred HHHHHHHHHHHHHHHHHHCCCEecC
Confidence 3567788999999999999998865
No 310
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=22.84 E-value=60 Score=25.63 Aligned_cols=25 Identities=12% Similarity=0.053 Sum_probs=21.5
Q ss_pred HHHHHHHhHHHHHHHhhhcccEEee
Q psy5049 3 LISVLAQNTRYFRRKLNRLGLILYV 27 (153)
Q Consensus 3 ~~~~~~~~~~~~~~~l~~~g~~~~~ 27 (153)
..+++.+|.+||++.|.+.|+.+++
T Consensus 283 ~~~~~~~~~~~l~~~L~~~g~~~~~ 307 (417)
T 3n0l_A 283 YAKQVRTNAQVLANVLMDRKFKLVS 307 (417)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCEEGG
T ss_pred HHHHHHHHHHHHHHHHHhCCceecc
Confidence 4567889999999999999999865
No 311
>2jpq_A UPF0352 protein VP2129; dimer, all alpha, homodimer, structural genomics, PSI-2, protein structure initiative; NMR {Vibrio parahaemolyticus} SCOP: a.284.1.1
Probab=21.98 E-value=55 Score=22.12 Aligned_cols=32 Identities=3% Similarity=-0.036 Sum_probs=25.3
Q ss_pred eeCCCCHHHHHHHHHHHHHHHHhcCCCceeee
Q psy5049 113 SSHLRSANLWNRPHSPSLMAVFRGGGPGIFPL 144 (153)
Q Consensus 113 lsA~HT~edId~L~~~~L~~~~~~~~~~~~~~ 144 (153)
+++-.+.++++++++..+..+.+...|.=|+|
T Consensus 3 i~SKYsd~qvE~ll~eli~VLEKH~Ap~DLSL 34 (83)
T 2jpq_A 3 ITSKYTDEQVEKILAEVALVLEKHAASPELTL 34 (83)
T ss_dssp SSCCSCHHHHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred ccccccHHHHHHHHHHHHHHHHhcCCCccHHH
Confidence 45678999999999878888888777765554
No 312
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=21.70 E-value=2.2e+02 Score=23.25 Aligned_cols=76 Identities=13% Similarity=0.062 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHHHHHHHH----hCCC----cccCCCCCCeEEEEcCCch-HHHhcc--ccccCCCCCCCCceEEEEeeCC
Q psy5049 48 RRISVLAHNTRYFRRKLN----RLGL----IVYGHRDSPVVPVLVFFFS-KVGQTS--IGLGVEQTALNDGLSLYESSHL 116 (153)
Q Consensus 48 ~rr~~L~~ni~~fr~~L~----~~G~----~~~~~s~SPIiPV~~g~~~-~~~~~a--~~i~~PtVP~g~~RlRI~lsA~ 116 (153)
+.|+++.++-.++.+.|+ +.|+ .+. .++.-. .++++-+. .+..+. ....-| -| ||++. .
T Consensus 316 ~~~~~~~~~R~~l~~~L~~~~~~~g~~~~~~~~-~p~gg~-f~~~~l~~~~~~~L~~~gV~v~p---~~----Ris~a-~ 385 (405)
T 3k7y_A 316 QLSQRITNNRILFFNKLETYQKKYNLNYDWNVY-KKQRGL-FSFVPLLAKIAEHLKTHHIYIIN---NG----RINVS-G 385 (405)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGGTCCCCGGGG-SSCCSS-EEECGGGGGGTTTTTTTTEECCT---TS----EEEGG-G
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhcCCCCCCccc-cCCceE-EEecCCCHHHHHHHHHCCEeecC---CC----eEEEe-c
Confidence 346678888999999999 8874 332 233332 34454332 221111 122223 22 88875 4
Q ss_pred CCHHHHHHHHHHHHHHHH
Q psy5049 117 RSANLWNRPHSPSLMAVF 134 (153)
Q Consensus 117 HT~edId~L~~~~L~~~~ 134 (153)
.++++|+++++ ++..+.
T Consensus 386 ~~~~~i~~~~~-~i~~~~ 402 (405)
T 3k7y_A 386 ITKNNVDYIAD-KICLSL 402 (405)
T ss_dssp CCTTHHHHHHH-HHHHHH
T ss_pred cCHHHHHHHHH-HHHHHH
Confidence 56688999888 776554
No 313
>2ebk_A RWD domain-containing protein 3; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.59 E-value=87 Score=21.47 Aligned_cols=45 Identities=9% Similarity=-0.057 Sum_probs=29.0
Q ss_pred ccccCCCCCCCCceEEEEeeCCCCHHHHHHHHHHHHHHHH-hc-CCCceeee
Q psy5049 95 IGLGVEQTALNDGLSLYESSHLRSANLWNRPHSPSLMAVF-RG-GGPGIFPL 144 (153)
Q Consensus 95 ~~i~~PtVP~g~~RlRI~lsA~HT~edId~L~~~~L~~~~-~~-~~~~~~~~ 144 (153)
.+-.||.+|. .+-+. +.+.++++...+.+ .|.... +. |.+++|.+
T Consensus 64 ~p~~YP~~~P---~i~l~-~~~L~~~~~~~l~~-~L~~~~~e~~G~~mif~l 110 (128)
T 2ebk_A 64 LPVNYPSCLP---GISIN-SEQLTRAQCVTVKE-KLLEQAESLLSEPMVHEL 110 (128)
T ss_dssp ECSSTTSSCC---CCCCC-CSSSCHHHHHHHHH-HHHHHHHHTTTSCHHHHH
T ss_pred CCCCCCCCCC---eEEEE-hhhCCHHHHHHHHH-HHHHHHHHhCCcchHHHH
Confidence 5557998764 34444 46789999999988 555443 33 55555543
No 314
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=21.51 E-value=53 Score=25.76 Aligned_cols=26 Identities=19% Similarity=0.312 Sum_probs=21.7
Q ss_pred HHHHHHHhHHHHHHHhhhcccEEeec
Q psy5049 3 LISVLAQNTRYFRRKLNRLGLILYVL 28 (153)
Q Consensus 3 ~~~~~~~~~~~~~~~l~~~g~~~~~~ 28 (153)
..+++.++++|++++|.++|+.+++.
T Consensus 283 ~~~~~~~~~~~l~~~L~~~g~~~~~~ 308 (396)
T 2ch1_A 283 QIKRRIECAQILYEGLGKMGLDIFVK 308 (396)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCBSSC
T ss_pred HHHHHHHHHHHHHHHHHHCCCeeccC
Confidence 45678899999999999999987653
No 315
>2ke4_A CDC42-interacting protein 4; CIP4, TC10, coiled-coil, alternative splicing, cell membrane, coiled coil, cytoplasm, cytoskeleton, endocytosis; NMR {Homo sapiens}
Probab=21.50 E-value=88 Score=21.43 Aligned_cols=28 Identities=14% Similarity=0.075 Sum_probs=22.2
Q ss_pred cCCCCCCCCcccccccccchHHHHHHHHHHHHHHHHHHh
Q psy5049 28 LFQAQTKPPRSHCICFISGIRRISVLAHNTRYFRRKLNR 66 (153)
Q Consensus 28 ~~~~~~~p~~~~~l~~~~~~~rr~~L~~ni~~fr~~L~~ 66 (153)
.+.+++|| .+|+.+|+..+..+.+.+..
T Consensus 6 ~d~s~LPp-----------eqRkkkL~~Ki~el~~ei~k 33 (98)
T 2ke4_A 6 EDFSHLPP-----------EQQRKRLQQQLEERSRELQK 33 (98)
T ss_dssp SCSSSSCH-----------HHHHHHHHHHHHHHHHHHHH
T ss_pred hhhccCCH-----------HHHHHHHHHHHHHHHHHHHH
Confidence 35567888 88999999988888887753
No 316
>3nrt_A Putative ryanodine receptor; PSI-2, protein structure initiative, structural genomics, MI center for structural genomics (MCSG); 2.54A {Bacteroides thetaiotaomicron}
Probab=21.47 E-value=2e+02 Score=19.65 Aligned_cols=66 Identities=12% Similarity=0.010 Sum_probs=39.9
Q ss_pred HHHHHHHhHHH-HHHHhhhcccEEee---cCCCCCCCCcccccccccchHHHHHHHHHHHHHHHHHHhCCCcc
Q psy5049 3 LISVLAQNTRY-FRRKLNRLGLILYV---LFQAQTKPPRSHCICFISGIRRISVLAHNTRYFRRKLNRLGLIV 71 (153)
Q Consensus 3 ~~~~~~~~~~~-~~~~l~~~g~~~~~---~~~~~~~p~~~~~l~~~~~~~rr~~L~~ni~~fr~~L~~~G~~~ 71 (153)
.+..||+|.-- .-+.-...|.. || |..+-.+|.|-..- ...+..++.=.+.+.-.-+.|..+||.+
T Consensus 30 lvE~LAen~H~~Wa~~r~~~GW~-yG~~rD~~~k~HP~Lvpy~--~L~e~~K~~dr~~~~e~lk~L~~~Gy~I 99 (103)
T 3nrt_A 30 LSERIAENVHEVWAKARIDEGWT-YGEKRDDIHKKHPCLVPYD--ELPEEEKEYDRNTAMNTIKMVKKLGFRI 99 (103)
T ss_dssp THHHHHHHHHHHHHHHHHHTTCE-ECSSCBTTTTEETTCSCGG--GSCHHHHHHHHHHHHHHHHHHHHTTEEE
T ss_pred HHHHHHHHHHHHHHHHHHHhccc-cCchhccccCCCCcccchh--hCCHHHHHHhHHHHHHHHHHHHHcCCee
Confidence 46889998754 66667788998 68 66666777532221 1223333333444555556677888754
No 317
>1h3d_A ATP-phosphoribosyltransferase; hisitidine biosynthesis, glycosyltransferase; HET: AMP TLA; 2.7A {Escherichia coli} SCOP: c.94.1.1 d.58.5.3 PDB: 1q1k_A*
Probab=21.27 E-value=80 Score=25.88 Aligned_cols=89 Identities=9% Similarity=-0.022 Sum_probs=55.3
Q ss_pred hHHHHHHHHHHHHHHHHHHhCCCcccCCCCCCeEEEEcCCchHHHhccccccCCCCCCC-CceEEEEeeCCCCHHHHHHH
Q psy5049 47 IRRISVLAHNTRYFRRKLNRLGLIVYGHRDSPVVPVLVFFFSKVGQTSIGLGVEQTALN-DGLSLYESSHLRSANLWNRP 125 (153)
Q Consensus 47 ~~rr~~L~~ni~~fr~~L~~~G~~~~~~s~SPIiPV~~g~~~~~~~~a~~i~~PtVP~g-~~RlRI~lsA~HT~edId~L 125 (153)
++.++.+.+.+..++..+...++... .-+-| -..-+++.++.++..-|||-.- ..--.+++++--.+.++..
T Consensus 204 ~~k~~~i~~l~~rl~~v~~A~~~~~~-~~n~p-----~~~l~~v~~~lPg~~~PTVs~l~~~~~wvAV~~vv~~~~~~~- 276 (299)
T 1h3d_A 204 ESKQQLIDKLLTRIQGVIQARESKYI-MMHAP-----TERLDEVIALLPGAERPTILPLAGDQQRVAMHMVSSETLFWE- 276 (299)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCEEE-ECCCC-----TTTHHHHHHHSCCSSCCCBCCCC-------BEEEESSCCCHH-
T ss_pred hhHHHHHHHHHHHHHHHHHhhceeEE-EEeCC-----HHHHHHHHHhcCCCCCCccccccCCCCEEEEEEEEcHHHHHH-
Confidence 47788899999999999987766432 12223 2222455566688899998533 2122566666666666666
Q ss_pred HHHHHHHHHhcCCCceeeec
Q psy5049 126 HSPSLMAVFRGGGPGIFPLQ 145 (153)
Q Consensus 126 ~~~~L~~~~~~~~~~~~~~~ 145 (153)
++..+++.|+.+|+-+.
T Consensus 277 ---~~~~Lk~~GA~~Ilv~~ 293 (299)
T 1h3d_A 277 ---TMEKLKALGASSILVLP 293 (299)
T ss_dssp ---HHHHHHHTTCCSCEEEC
T ss_pred ---HHHHHHHcCCCeEEEec
Confidence 45588888888887554
No 318
>2jrx_A UPF0352 protein YEJL; homodimer, alpha helix, structural genomics, PSI-2, protein initiative, northeast structural genomics consortium, NESG; NMR {Escherichia coli} SCOP: a.284.1.1
Probab=20.84 E-value=55 Score=22.13 Aligned_cols=32 Identities=13% Similarity=-0.007 Sum_probs=25.2
Q ss_pred eeCCCCHHHHHHHHHHHHHHHHhcCCCceeee
Q psy5049 113 SSHLRSANLWNRPHSPSLMAVFRGGGPGIFPL 144 (153)
Q Consensus 113 lsA~HT~edId~L~~~~L~~~~~~~~~~~~~~ 144 (153)
+++-.+.++++++++..+..+.+...|.=|+|
T Consensus 3 i~SKYsd~qvE~ll~eli~VLEKH~Ap~DLSL 34 (83)
T 2jrx_A 3 QISRYSDEQVEQLLAELLNVLEKHKAPTDLSL 34 (83)
T ss_dssp CTTCTTHHHHHHHHHHHHHHHHHHTCCHHHHH
T ss_pred ccccccHHHHHHHHHHHHHHHHhcCCCccHHH
Confidence 45678999999999878888888777765554
No 319
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=20.57 E-value=75 Score=24.66 Aligned_cols=25 Identities=20% Similarity=0.332 Sum_probs=21.3
Q ss_pred HHHHHHHhHHHHHHHhhhc-ccEEee
Q psy5049 3 LISVLAQNTRYFRRKLNRL-GLILYV 27 (153)
Q Consensus 3 ~~~~~~~~~~~~~~~l~~~-g~~~~~ 27 (153)
..+++.+++++|++.|.++ |+.+++
T Consensus 298 ~~~~~~~~~~~l~~~L~~~~g~~~~~ 323 (390)
T 1elu_A 298 RYQAICQRSEFLWRGLNQLPHVHCLA 323 (390)
T ss_dssp HHHHHHHHHHHHHHHHHHSTTEEESC
T ss_pred HHHHHHHHHHHHHHHHHhcCCcEEec
Confidence 4567889999999999998 998865
No 320
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=20.56 E-value=71 Score=25.20 Aligned_cols=25 Identities=20% Similarity=0.174 Sum_probs=21.4
Q ss_pred HHHHHHHhHHHHHHHhhhcccEEee
Q psy5049 3 LISVLAQNTRYFRRKLNRLGLILYV 27 (153)
Q Consensus 3 ~~~~~~~~~~~~~~~l~~~g~~~~~ 27 (153)
..+++.++.+||+++|.+.||.+..
T Consensus 291 ~~~~~~~~~~~l~~~L~~~g~~~~~ 315 (425)
T 3ecd_A 291 YIDRVLANAQALGDVLKAGGVDLVT 315 (425)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCEEGG
T ss_pred HHHHHHHHHHHHHHHHHhCCCeecc
Confidence 4567889999999999999998854
No 321
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=20.24 E-value=1.6e+02 Score=22.64 Aligned_cols=24 Identities=21% Similarity=0.297 Sum_probs=20.3
Q ss_pred HHHHHHhHHHHHHHh-hhcccEEee
Q psy5049 4 ISVLAQNTRYFRRKL-NRLGLILYV 27 (153)
Q Consensus 4 ~~~~~~~~~~~~~~l-~~~g~~~~~ 27 (153)
.++..++++|+++.| .++|+.+++
T Consensus 283 ~~~~~~~~~~l~~~L~~~~g~~~~~ 307 (385)
T 2bkw_A 283 WDLHREMSDWFKDSLVNGLQLTSVS 307 (385)
T ss_dssp HHHHHHHHHHHHHHHHTTTCCEESS
T ss_pred HHHHHHHHHHHHHHHHHhcCceecc
Confidence 567788999999999 888998764
No 322
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=20.12 E-value=62 Score=25.31 Aligned_cols=24 Identities=42% Similarity=0.743 Sum_probs=20.7
Q ss_pred HHHHHHHhHHHHHHHhhhcccEEe
Q psy5049 3 LISVLAQNTRYFRRKLNRLGLILY 26 (153)
Q Consensus 3 ~~~~~~~~~~~~~~~l~~~g~~~~ 26 (153)
..+++.++.+||+++|++.|+.+.
T Consensus 300 ~~~~~~~~~~~l~~~L~~~g~~~~ 323 (399)
T 3tqx_A 300 LRKQLQENSRYFRAGMEKLGFQLV 323 (399)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCBC
T ss_pred HHHHHHHHHHHHHHHHHHcCCCcC
Confidence 456788999999999999998864
Done!