BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>psy5049
IRLISVLAQNTRYFRRKLNRLGLILYVLFQAQTKPPRSHCICFISGIRRISVLAHNTRYF
RRKLNRLGLIVYGHRDSPVVPVLVFFFSKVGQTSIGLGVEQTALNDGLSLYESSHLRSAN
LWNRPHSPSLMAVFRGGGPGIFPLQHRADSENL

High Scoring Gene Products

Symbol, full name Information P value
SPTLC3
Serine palmitoyltransferase 3 		protein from Homo sapiens 0.00010
lace protein from Drosophila melanogaster 0.00016

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  psy5049
        (153 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

UNIPROTKB|H0Y733 - symbol:SPTLC3 "Serine palmitoyltransfe...    93  0.00010   1
FB|FBgn0002524 - symbol:lace "lace" species:7227 "Drosoph...   102  0.00016   1


>UNIPROTKB|H0Y733 [details] [associations]
            symbol:SPTLC3 "Serine palmitoyltransferase 3" species:9606
            "Homo sapiens" [GO:0003824 "catalytic activity" evidence=IEA]
            [GO:0009058 "biosynthetic process" evidence=IEA] [GO:0030170
            "pyridoxal phosphate binding" evidence=IEA] InterPro:IPR004839
            InterPro:IPR015422 Pfam:PF00155 GO:GO:0030170 GO:GO:0009058
            Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
            GO:GO:0003824 EMBL:AL050320 EMBL:AL133331 EMBL:AL109983
            EMBL:AL445589 HGNC:HGNC:16253 ChiTaRS:SPTLC3
            ProteinModelPortal:H0Y733 Ensembl:ENST00000431275 Uniprot:H0Y733
        Length = 121

 Score = 93 (37.8 bits), Expect = 0.00010, P = 0.00010
 Identities = 15/31 (48%), Positives = 24/31 (77%)

Query:    46 GIRRISVLAHNTRYFRRKLNRLGLIVYGHRD 76
             G++R+  LA NTRYFR++L  +G I+YG+ +
Sbjct:    25 GLQRVQQLAKNTRYFRQRLQEMGFIIYGNEN 55


>FB|FBgn0002524 [details] [associations]
            symbol:lace "lace" species:7227 "Drosophila melanogaster"
            [GO:0004758 "serine C-palmitoyltransferase activity"
            evidence=ISS;NAS;IDA] [GO:0007444 "imaginal disc development"
            evidence=IMP] [GO:0030148 "sphingolipid biosynthetic process"
            evidence=IMP] [GO:0005886 "plasma membrane" evidence=IDA]
            [GO:0030170 "pyridoxal phosphate binding" evidence=IEA]
            InterPro:IPR001917 InterPro:IPR004839 InterPro:IPR015421
            InterPro:IPR015422 Pfam:PF00155 PROSITE:PS00599 GO:GO:0005886
            GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
            InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0030148 GO:GO:0007444
            eggNOG:COG0156 GO:GO:0004758 HSSP:P07912 EMBL:AB017359
            ProteinModelPortal:Q9U912 SMR:Q9U912 STRING:Q9U912 PaxDb:Q9U912
            PRIDE:Q9U912 FlyBase:FBgn0002524 InParanoid:Q9U912
            OrthoDB:EOG4FQZ6R ArrayExpress:Q9U912 Bgee:Q9U912 Uniprot:Q9U912
        Length = 597

 Score = 102 (41.0 bits), Expect = 0.00016, P = 0.00016
 Identities = 19/31 (61%), Positives = 24/31 (77%)

Query:    46 GIRRISVLAHNTRYFRRKLNRLGLIVYGHRD 76
             G ++I  LA NTRYFRR+L +LG+I YGH D
Sbjct:   481 GRKKIHQLARNTRYFRRRLAQLGVITYGHED 511


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.326   0.142   0.431    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      153       139   0.00091  102 3  11 22  0.36    31
                                                     30  0.46    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  578 (61 KB)
  Total size of DFA:  128 KB (2081 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  10.95u 0.07s 11.02t   Elapsed:  00:00:05
  Total cpu time:  10.95u 0.07s 11.02t   Elapsed:  00:00:05
  Start:  Thu Aug 15 15:17:42 2013   End:  Thu Aug 15 15:17:47 2013

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