Query psy5051
Match_columns 87
No_of_seqs 170 out of 1052
Neff 8.2
Searched_HMMs 46136
Date Sat Aug 17 00:29:39 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5051.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/5051hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2624|consensus 99.5 1.1E-14 2.4E-19 103.9 4.6 74 1-74 142-215 (403)
2 PLN02872 triacylglycerol lipas 99.3 4.3E-12 9.3E-17 90.6 4.2 69 2-72 143-211 (395)
3 PF00561 Abhydrolase_1: alpha/ 99.1 9.4E-11 2E-15 75.3 5.3 52 3-57 27-78 (230)
4 PLN02824 hydrolase, alpha/beta 98.9 4.8E-09 1E-13 71.0 5.4 51 4-57 83-136 (294)
5 TIGR02240 PHA_depoly_arom poly 98.9 5.4E-09 1.2E-13 70.2 5.6 50 7-59 78-127 (276)
6 TIGR01836 PHA_synth_III_C poly 98.8 9.7E-09 2.1E-13 71.7 6.2 55 4-61 120-174 (350)
7 COG2267 PldB Lysophospholipase 98.8 1.1E-08 2.4E-13 70.7 5.9 54 5-61 92-145 (298)
8 PF12697 Abhydrolase_6: Alpha/ 98.8 1.2E-08 2.7E-13 64.3 5.4 49 8-59 54-102 (228)
9 KOG4409|consensus 98.8 1.3E-08 2.8E-13 71.7 5.6 51 9-62 149-199 (365)
10 PRK10749 lysophospholipase L2; 98.7 2E-08 4.2E-13 69.7 5.4 38 18-58 129-166 (330)
11 PLN02965 Probable pheophorbida 98.7 2E-08 4.3E-13 66.9 4.6 51 4-57 52-106 (255)
12 TIGR03343 biphenyl_bphD 2-hydr 98.7 2.8E-08 6.1E-13 66.3 5.4 48 7-57 88-135 (282)
13 PRK03592 haloalkane dehalogena 98.7 3.2E-08 7E-13 67.0 5.7 51 4-57 74-127 (295)
14 PHA02857 monoglyceride lipase; 98.7 4.1E-08 8.9E-13 65.7 6.1 40 17-59 94-133 (276)
15 PRK10349 carboxylesterase BioH 98.7 4.6E-08 1E-12 64.8 6.1 50 4-57 59-108 (256)
16 TIGR01392 homoserO_Ac_trn homo 98.7 3.6E-08 7.7E-13 68.8 5.7 51 5-58 111-162 (351)
17 PRK07581 hypothetical protein; 98.7 3.2E-08 7E-13 68.4 5.3 41 13-56 116-157 (339)
18 PRK00870 haloalkane dehalogena 98.7 4.2E-08 9.2E-13 66.7 5.5 51 4-57 96-149 (302)
19 PRK08775 homoserine O-acetyltr 98.7 4.5E-08 9.7E-13 68.1 5.6 50 6-58 123-173 (343)
20 KOG1454|consensus 98.7 5.9E-08 1.3E-12 67.9 6.0 56 8-63 116-171 (326)
21 PLN02298 hydrolase, alpha/beta 98.7 1.1E-07 2.3E-12 65.6 7.2 52 5-59 117-170 (330)
22 PLN02733 phosphatidylcholine-s 98.7 6.1E-08 1.3E-12 70.3 6.2 53 5-57 147-200 (440)
23 TIGR01738 bioH putative pimelo 98.7 6.9E-08 1.5E-12 61.8 5.7 50 4-57 50-99 (245)
24 PRK10673 acyl-CoA esterase; Pr 98.7 5.7E-08 1.2E-12 63.9 5.2 49 4-55 62-113 (255)
25 TIGR02427 protocat_pcaD 3-oxoa 98.7 5.1E-08 1.1E-12 62.5 4.9 47 8-57 67-113 (251)
26 TIGR01250 pro_imino_pep_2 prol 98.6 6.4E-08 1.4E-12 63.5 5.4 46 9-57 85-130 (288)
27 PRK03204 haloalkane dehalogena 98.6 5.7E-08 1.2E-12 66.1 4.9 51 5-58 86-136 (286)
28 PRK11126 2-succinyl-6-hydroxy- 98.6 1.1E-07 2.4E-12 62.2 6.0 51 5-57 48-101 (242)
29 PRK06765 homoserine O-acetyltr 98.6 1.3E-07 2.8E-12 67.6 6.7 50 5-57 145-195 (389)
30 PRK06489 hypothetical protein; 98.6 1E-07 2.2E-12 66.8 6.0 51 4-57 133-188 (360)
31 TIGR03611 RutD pyrimidine util 98.6 8E-08 1.7E-12 62.3 5.2 47 9-58 69-115 (257)
32 PLN03087 BODYGUARD 1 domain co 98.6 1E-07 2.2E-12 69.9 6.0 45 12-59 266-310 (481)
33 TIGR03101 hydr2_PEP hydrolase, 98.6 1.2E-07 2.6E-12 64.8 5.9 54 5-62 85-138 (266)
34 TIGR03695 menH_SHCHC 2-succiny 98.6 1.1E-07 2.4E-12 60.7 5.2 51 4-57 50-104 (251)
35 TIGR01249 pro_imino_pep_1 prol 98.6 1E-07 2.3E-12 65.2 5.3 50 5-57 80-129 (306)
36 cd00707 Pancreat_lipase_like P 98.6 9.8E-08 2.1E-12 65.3 5.0 51 5-58 95-147 (275)
37 PLN02894 hydrolase, alpha/beta 98.6 1.8E-07 3.8E-12 66.9 6.3 46 12-60 168-213 (402)
38 TIGR03056 bchO_mg_che_rel puta 98.5 1.7E-07 3.7E-12 61.9 5.4 50 4-56 76-128 (278)
39 PRK00175 metX homoserine O-ace 98.5 2.7E-07 5.9E-12 65.2 6.5 52 4-58 127-182 (379)
40 PF07819 PGAP1: PGAP1-like pro 98.5 2.1E-07 4.6E-12 62.1 5.5 52 7-58 67-123 (225)
41 PRK10985 putative hydrolase; P 98.5 2E-07 4.3E-12 64.6 5.5 54 4-58 115-168 (324)
42 PLN02578 hydrolase 98.5 2.5E-07 5.4E-12 64.8 5.9 52 4-58 133-187 (354)
43 PLN02652 hydrolase; alpha/beta 98.5 3.3E-07 7.1E-12 65.6 6.4 56 5-61 193-248 (395)
44 PLN02385 hydrolase; alpha/beta 98.5 2.1E-07 4.6E-12 64.8 5.2 37 20-59 162-198 (349)
45 TIGR03230 lipo_lipase lipoprot 98.5 2.6E-07 5.6E-12 67.2 5.5 52 5-59 102-155 (442)
46 PRK14875 acetoin dehydrogenase 98.5 5.1E-07 1.1E-11 62.5 6.7 48 9-59 186-233 (371)
47 PLN02679 hydrolase, alpha/beta 98.5 3.3E-07 7.3E-12 64.4 5.5 52 4-58 136-191 (360)
48 PLN02211 methyl indole-3-aceta 98.4 3.6E-07 7.8E-12 62.0 4.9 51 4-57 67-121 (273)
49 PLN02511 hydrolase 98.4 5.9E-07 1.3E-11 63.9 5.6 52 4-56 157-208 (388)
50 PRK13604 luxD acyl transferase 98.4 3.5E-07 7.6E-12 63.8 4.2 54 2-61 91-144 (307)
51 TIGR01607 PST-A Plasmodium sub 98.4 7.6E-07 1.7E-11 62.1 5.9 40 19-58 141-185 (332)
52 KOG1455|consensus 98.4 9.5E-07 2.1E-11 61.4 5.9 64 17-83 126-196 (313)
53 PRK11071 esterase YqiA; Provis 98.3 2.3E-06 5E-11 55.5 6.3 49 5-59 46-94 (190)
54 TIGR01840 esterase_phb esteras 98.3 2E-06 4.3E-11 56.2 5.4 51 4-57 77-129 (212)
55 TIGR03100 hydr1_PEP hydrolase, 98.3 2.3E-06 4.9E-11 58.1 5.4 52 4-59 83-135 (274)
56 PLN03084 alpha/beta hydrolase 98.2 2.6E-06 5.5E-11 60.9 5.7 52 4-58 178-232 (383)
57 PLN02442 S-formylglutathione h 98.2 2.7E-06 5.8E-11 58.2 5.3 42 15-59 138-179 (283)
58 COG0596 MhpC Predicted hydrola 98.2 4.1E-06 9E-11 52.8 5.4 48 7-57 75-122 (282)
59 PF12695 Abhydrolase_5: Alpha/ 98.2 7.2E-06 1.6E-10 49.5 5.6 48 5-56 45-93 (145)
60 cd00741 Lipase Lipase. Lipase 98.1 4.9E-06 1.1E-10 51.9 4.7 47 14-60 22-69 (153)
61 PF01674 Lipase_2: Lipase (cla 98.1 4.1E-06 8.8E-11 56.0 4.5 36 5-41 61-96 (219)
62 TIGR01838 PHA_synth_I poly(R)- 98.1 4E-06 8.8E-11 62.2 4.9 54 4-60 246-304 (532)
63 PF06028 DUF915: Alpha/beta hy 98.1 6.6E-06 1.4E-10 56.1 5.3 51 7-57 90-143 (255)
64 PF02450 LCAT: Lecithin:choles 98.1 5.7E-06 1.2E-10 59.2 5.0 51 6-57 106-159 (389)
65 PLN02980 2-oxoglutarate decarb 98.1 6.8E-06 1.5E-10 67.5 5.5 50 5-57 1427-1479(1655)
66 TIGR02821 fghA_ester_D S-formy 98.1 1.3E-05 2.9E-10 54.4 5.9 39 18-59 136-174 (275)
67 PLN00021 chlorophyllase 98.0 6.9E-06 1.5E-10 57.3 4.4 41 19-59 125-167 (313)
68 TIGR01839 PHA_synth_II poly(R) 98.0 1.2E-05 2.7E-10 60.0 5.7 54 5-60 273-330 (560)
69 PF00326 Peptidase_S9: Prolyl 98.0 9.3E-06 2E-10 52.8 4.2 53 4-59 46-100 (213)
70 PRK05077 frsA fermentation/res 98.0 1.4E-05 3E-10 57.5 5.2 48 8-58 251-300 (414)
71 KOG4178|consensus 98.0 1.9E-05 4.2E-10 55.3 5.7 44 9-55 102-145 (322)
72 PF11288 DUF3089: Protein of u 98.0 1.5E-05 3.2E-10 53.0 4.8 53 2-55 76-133 (207)
73 KOG1552|consensus 98.0 1.3E-05 2.8E-10 54.7 4.3 51 3-58 112-163 (258)
74 PF05990 DUF900: Alpha/beta hy 98.0 2.5E-05 5.4E-10 52.4 5.6 56 5-60 78-139 (233)
75 PRK10566 esterase; Provisional 97.9 1.3E-05 2.8E-10 52.8 4.1 39 5-43 90-130 (249)
76 PF01764 Lipase_3: Lipase (cla 97.9 3.1E-05 6.6E-10 47.2 4.8 33 8-40 52-84 (140)
77 PF06821 Ser_hydrolase: Serine 97.8 4.2E-05 9.1E-10 49.2 4.9 53 5-59 38-92 (171)
78 PF10230 DUF2305: Uncharacteri 97.8 6.4E-05 1.4E-09 51.3 5.8 56 3-58 58-122 (266)
79 PRK11460 putative hydrolase; P 97.8 6.7E-05 1.4E-09 50.0 5.6 34 19-55 102-135 (232)
80 COG2021 MET2 Homoserine acetyl 97.8 4.7E-05 1E-09 54.2 5.0 39 11-49 137-176 (368)
81 KOG2382|consensus 97.8 3.6E-05 7.7E-10 53.9 4.3 39 18-57 121-160 (315)
82 PRK07868 acyl-CoA synthetase; 97.8 5E-05 1.1E-09 59.7 5.3 37 19-57 140-176 (994)
83 PF11187 DUF2974: Protein of u 97.7 8.9E-05 1.9E-09 49.7 5.3 49 12-61 77-126 (224)
84 PF00975 Thioesterase: Thioest 97.7 6.7E-05 1.4E-09 48.9 4.6 51 5-55 47-101 (229)
85 KOG2564|consensus 97.7 3.8E-05 8.2E-10 53.5 3.2 35 19-55 145-179 (343)
86 PF00151 Lipase: Lipase; Inte 97.7 0.00013 2.9E-09 51.4 5.8 54 7-61 135-190 (331)
87 cd00519 Lipase_3 Lipase (class 97.7 5.2E-05 1.1E-09 50.1 3.6 31 10-40 118-148 (229)
88 PF00756 Esterase: Putative es 97.7 7.6E-05 1.7E-09 49.4 4.4 46 9-57 102-149 (251)
89 PRK05855 short chain dehydroge 97.7 0.00011 2.4E-09 53.5 5.5 51 4-55 74-128 (582)
90 PF07859 Abhydrolase_3: alpha/ 97.7 2.8E-05 6E-10 50.2 2.0 57 4-60 50-112 (211)
91 PF01083 Cutinase: Cutinase; 97.6 0.00011 2.4E-09 47.5 4.5 55 5-59 66-123 (179)
92 PLN00413 triacylglycerol lipas 97.6 9.1E-05 2E-09 54.4 4.2 36 4-39 268-303 (479)
93 PF06057 VirJ: Bacterial virul 97.6 0.0001 2.2E-09 48.4 3.9 54 4-57 52-106 (192)
94 COG4782 Uncharacterized protei 97.6 0.00016 3.5E-09 51.6 4.9 65 3-67 174-243 (377)
95 COG1075 LipA Predicted acetylt 97.5 0.00012 2.7E-09 51.4 4.2 52 7-59 114-165 (336)
96 PF02230 Abhydrolase_2: Phosph 97.5 0.00023 5E-09 46.6 5.2 37 18-57 103-139 (216)
97 TIGR00976 /NonD putative hydro 97.5 0.00017 3.6E-09 53.5 4.7 52 3-57 79-131 (550)
98 COG3208 GrsT Predicted thioest 97.5 0.00014 3E-09 49.3 3.9 39 3-41 53-95 (244)
99 COG0400 Predicted esterase [Ge 97.5 0.00033 7.2E-09 46.5 5.4 47 9-58 86-134 (207)
100 COG3243 PhaC Poly(3-hydroxyalk 97.5 0.00013 2.9E-09 52.9 3.7 49 5-55 166-214 (445)
101 PF08538 DUF1749: Protein of u 97.5 0.00019 4.1E-09 50.1 4.3 58 4-61 88-151 (303)
102 PF08840 BAAT_C: BAAT / Acyl-C 97.5 0.00028 6.2E-09 46.6 4.9 50 6-59 6-57 (213)
103 KOG2369|consensus 97.5 0.00019 4.1E-09 52.6 4.3 51 6-56 168-223 (473)
104 PLN02517 phosphatidylcholine-s 97.4 0.00028 6.1E-09 53.3 5.2 52 6-57 199-262 (642)
105 COG3545 Predicted esterase of 97.4 0.00062 1.4E-08 44.3 6.1 54 6-62 43-98 (181)
106 PF10503 Esterase_phd: Esteras 97.4 0.00041 8.9E-09 46.4 5.4 40 5-44 80-121 (220)
107 KOG1838|consensus 97.4 0.00033 7.1E-09 50.7 4.9 55 3-58 181-236 (409)
108 PRK10162 acetyl esterase; Prov 97.4 0.0003 6.5E-09 48.9 4.6 58 3-60 132-197 (318)
109 PLN02162 triacylglycerol lipas 97.4 0.00023 4.9E-09 52.3 4.0 34 6-39 264-297 (475)
110 PF05728 UPF0227: Uncharacteri 97.4 0.00049 1.1E-08 44.9 4.9 46 9-60 48-93 (187)
111 PLN02454 triacylglycerol lipas 97.3 0.00028 6.1E-09 51.2 4.0 35 6-40 212-248 (414)
112 PLN02934 triacylglycerol lipas 97.3 0.00024 5.3E-09 52.6 3.7 35 5-39 306-340 (515)
113 COG4757 Predicted alpha/beta h 97.3 0.00017 3.7E-09 49.1 2.0 35 1-35 86-120 (281)
114 PF12740 Chlorophyllase2: Chlo 97.2 0.00044 9.5E-09 47.4 3.9 54 5-58 66-131 (259)
115 PF05057 DUF676: Putative seri 97.2 0.00047 1E-08 45.7 3.7 20 20-39 78-97 (217)
116 COG4814 Uncharacterized protei 97.2 0.00048 1E-08 47.3 3.7 50 7-56 123-174 (288)
117 PLN02571 triacylglycerol lipas 97.1 0.00058 1.3E-08 49.5 3.8 32 9-40 213-246 (413)
118 KOG3101|consensus 97.1 4E-05 8.7E-10 51.6 -2.2 54 19-76 140-193 (283)
119 KOG3724|consensus 97.1 0.00087 1.9E-08 52.1 4.4 36 20-56 182-218 (973)
120 TIGR01849 PHB_depoly_PhaZ poly 97.1 0.0022 4.7E-08 46.6 6.1 58 3-61 149-211 (406)
121 smart00824 PKS_TE Thioesterase 97.0 0.0017 3.6E-08 40.9 4.9 44 13-56 57-100 (212)
122 COG2819 Predicted hydrolase of 97.0 0.0016 3.5E-08 44.8 5.0 43 17-62 134-176 (264)
123 COG1647 Esterase/lipase [Gener 97.0 0.0023 5E-08 43.2 5.6 41 17-62 82-122 (243)
124 PF11339 DUF3141: Protein of u 97.0 0.0025 5.4E-08 47.6 6.0 62 9-73 128-192 (581)
125 PLN02408 phospholipase A1 97.0 0.0011 2.4E-08 47.4 4.0 33 8-40 186-220 (365)
126 PF07224 Chlorophyllase: Chlor 96.9 0.0014 3E-08 45.4 3.9 56 5-61 95-160 (307)
127 COG3319 Thioesterase domains o 96.9 0.0014 3E-08 44.9 3.6 49 9-57 54-102 (257)
128 PRK10439 enterobactin/ferric e 96.9 0.0036 7.9E-08 45.3 5.9 37 19-58 287-323 (411)
129 PF01738 DLH: Dienelactone hyd 96.9 0.0011 2.5E-08 43.2 3.0 48 5-56 81-130 (218)
130 PLN02324 triacylglycerol lipas 96.8 0.0014 3.1E-08 47.5 3.7 33 8-40 201-235 (415)
131 PF06342 DUF1057: Alpha/beta h 96.8 0.0031 6.8E-08 43.9 5.1 50 7-61 90-140 (297)
132 COG0627 Predicted esterase [Ge 96.8 0.0014 3E-08 46.1 3.0 38 21-61 153-190 (316)
133 PF03096 Ndr: Ndr family; Int 96.8 0.0025 5.5E-08 44.2 4.2 53 4-59 83-135 (283)
134 COG2945 Predicted hydrolase of 96.7 0.0023 5.1E-08 42.4 3.6 41 3-43 85-126 (210)
135 PLN02310 triacylglycerol lipas 96.7 0.0022 4.8E-08 46.5 3.5 20 20-39 209-228 (405)
136 PLN02802 triacylglycerol lipas 96.6 0.0026 5.7E-08 47.2 3.8 32 9-40 317-350 (509)
137 KOG4569|consensus 96.6 0.0033 7.2E-08 44.4 4.1 36 5-40 156-191 (336)
138 COG0412 Dienelactone hydrolase 96.6 0.0046 1E-07 41.5 4.5 49 4-56 94-144 (236)
139 COG0429 Predicted hydrolase of 96.6 0.0051 1.1E-07 43.7 4.7 54 4-57 132-185 (345)
140 PLN02753 triacylglycerol lipas 96.5 0.0031 6.6E-08 47.1 3.6 20 20-39 312-331 (531)
141 PLN02719 triacylglycerol lipas 96.5 0.003 6.6E-08 47.0 3.6 21 20-40 298-318 (518)
142 PF05448 AXE1: Acetyl xylan es 96.5 0.0045 9.8E-08 43.5 4.2 49 5-57 158-208 (320)
143 KOG2984|consensus 96.5 0.00096 2.1E-08 44.9 0.8 51 13-66 107-157 (277)
144 KOG2931|consensus 96.5 0.0045 9.8E-08 43.4 4.0 52 3-57 105-156 (326)
145 PLN02761 lipase class 3 family 96.5 0.0034 7.4E-08 46.8 3.6 20 20-39 294-313 (527)
146 PRK04940 hypothetical protein; 96.4 0.0086 1.9E-07 39.1 4.8 36 20-61 60-95 (180)
147 PRK10252 entF enterobactin syn 96.4 0.0051 1.1E-07 49.1 4.4 53 4-56 1113-1169(1296)
148 PLN03037 lipase class 3 family 96.4 0.0048 1E-07 46.0 3.8 21 20-40 318-338 (525)
149 PF02089 Palm_thioest: Palmito 96.4 0.0056 1.2E-07 42.5 3.9 35 20-56 80-114 (279)
150 PF06259 Abhydrolase_8: Alpha/ 96.3 0.015 3.3E-07 37.7 5.6 52 5-59 93-145 (177)
151 PLN02633 palmitoyl protein thi 96.3 0.012 2.7E-07 41.3 5.5 50 6-56 75-129 (314)
152 TIGR03502 lipase_Pla1_cef extr 96.3 0.0058 1.2E-07 47.7 4.1 22 19-40 554-575 (792)
153 KOG4840|consensus 96.3 0.0037 7.9E-08 42.6 2.7 55 4-59 91-145 (299)
154 PLN02606 palmitoyl-protein thi 96.3 0.013 2.9E-07 41.1 5.5 51 5-56 75-130 (306)
155 PF09752 DUF2048: Uncharacteri 96.3 0.0094 2E-07 42.5 4.7 37 6-43 162-198 (348)
156 PLN02847 triacylglycerol lipas 96.2 0.0083 1.8E-07 45.5 4.4 45 14-60 245-292 (633)
157 PF03403 PAF-AH_p_II: Platelet 96.2 0.0043 9.4E-08 44.5 2.8 37 19-59 227-263 (379)
158 PF06500 DUF1100: Alpha/beta h 96.0 0.015 3.3E-07 42.3 4.9 49 7-58 246-296 (411)
159 COG0657 Aes Esterase/lipase [L 96.0 0.0074 1.6E-07 41.4 3.1 59 3-61 130-194 (312)
160 cd00312 Esterase_lipase Estera 95.9 0.017 3.7E-07 42.0 4.6 54 2-56 153-211 (493)
161 PF12715 Abhydrolase_7: Abhydr 95.7 0.012 2.6E-07 42.5 3.3 43 8-54 212-256 (390)
162 COG3509 LpqC Poly(3-hydroxybut 95.7 0.031 6.7E-07 39.2 5.2 44 5-48 127-172 (312)
163 PF05277 DUF726: Protein of un 95.5 0.029 6.2E-07 40.0 4.4 40 17-56 217-258 (345)
164 PF12048 DUF3530: Protein of u 95.3 0.09 1.9E-06 36.8 6.4 55 17-73 190-244 (310)
165 PF00135 COesterase: Carboxyle 95.2 0.024 5.2E-07 41.1 3.5 54 2-56 185-243 (535)
166 PF05677 DUF818: Chlamydia CHL 95.2 0.034 7.4E-07 39.8 3.9 38 4-41 196-236 (365)
167 KOG4540|consensus 95.1 0.028 6.1E-07 39.7 3.4 33 9-41 265-297 (425)
168 COG5153 CVT17 Putative lipase 95.1 0.028 6.1E-07 39.7 3.4 33 9-41 265-297 (425)
169 PRK05371 x-prolyl-dipeptidyl a 94.9 0.06 1.3E-06 42.0 5.0 51 4-57 306-372 (767)
170 KOG1553|consensus 94.7 0.054 1.2E-06 39.3 4.0 47 6-56 295-343 (517)
171 PF05577 Peptidase_S28: Serine 94.7 0.14 3E-06 36.9 6.2 52 3-57 93-147 (434)
172 PF02129 Peptidase_S15: X-Pro 94.7 0.079 1.7E-06 35.8 4.6 49 4-56 84-134 (272)
173 KOG3975|consensus 94.7 0.075 1.6E-06 36.8 4.4 44 13-57 102-146 (301)
174 COG1506 DAP2 Dipeptidyl aminop 94.6 0.057 1.2E-06 41.0 4.2 39 5-43 456-496 (620)
175 COG2272 PnbA Carboxylesterase 94.6 0.069 1.5E-06 39.7 4.4 56 2-58 157-217 (491)
176 KOG2183|consensus 94.5 0.046 9.9E-07 40.2 3.2 59 3-63 148-208 (492)
177 COG4099 Predicted peptidase [G 94.3 0.091 2E-06 37.4 4.3 41 13-56 260-302 (387)
178 PF03959 FSH1: Serine hydrolas 94.3 0.035 7.5E-07 36.5 2.1 53 5-57 85-144 (212)
179 KOG4391|consensus 94.3 0.0077 1.7E-07 41.0 -1.0 47 4-53 131-179 (300)
180 PTZ00472 serine carboxypeptida 94.2 0.082 1.8E-06 38.9 4.1 22 19-40 170-191 (462)
181 PF10340 DUF2424: Protein of u 94.2 0.11 2.4E-06 37.5 4.6 53 9-61 184-238 (374)
182 PRK10115 protease 2; Provision 93.8 0.098 2.1E-06 40.3 4.0 51 4-57 506-558 (686)
183 COG3571 Predicted hydrolase of 93.7 0.13 2.8E-06 33.6 3.8 42 12-56 81-122 (213)
184 KOG4627|consensus 93.6 0.058 1.3E-06 36.5 2.2 50 6-57 121-171 (270)
185 KOG4667|consensus 93.5 0.11 2.4E-06 35.4 3.4 49 4-57 90-138 (269)
186 COG2382 Fes Enterochelin ester 93.2 0.086 1.9E-06 37.0 2.6 39 20-61 177-215 (299)
187 PF03583 LIP: Secretory lipase 93.2 0.19 4E-06 34.8 4.2 39 20-58 71-113 (290)
188 COG4188 Predicted dienelactone 92.8 0.16 3.4E-06 36.6 3.5 40 4-43 134-182 (365)
189 KOG3847|consensus 92.5 0.04 8.6E-07 39.3 0.2 28 16-43 237-264 (399)
190 KOG1515|consensus 92.2 0.37 7.9E-06 34.3 4.8 60 3-62 143-211 (336)
191 COG3458 Acetyl esterase (deace 92.2 0.11 2.4E-06 36.4 2.1 48 5-56 159-208 (321)
192 KOG2541|consensus 91.8 0.56 1.2E-05 32.8 5.1 35 19-55 91-125 (296)
193 COG3946 VirJ Type IV secretory 91.5 0.21 4.6E-06 36.6 3.0 51 4-54 310-361 (456)
194 KOG2100|consensus 91.2 0.36 7.8E-06 37.8 4.1 56 3-61 586-647 (755)
195 KOG2565|consensus 91.1 1.1 2.4E-05 32.9 6.2 40 7-46 216-255 (469)
196 KOG1516|consensus 90.9 0.41 8.9E-06 35.4 4.1 53 2-55 172-229 (545)
197 PF07082 DUF1350: Protein of u 90.8 0.23 5E-06 34.0 2.5 23 21-43 91-113 (250)
198 PF08237 PE-PPE: PE-PPE domain 90.7 0.88 1.9E-05 30.5 5.2 23 18-40 46-68 (225)
199 PF11144 DUF2920: Protein of u 90.5 0.36 7.8E-06 35.2 3.3 41 4-44 164-208 (403)
200 PF07519 Tannase: Tannase and 90.0 0.45 9.7E-06 35.3 3.6 39 19-60 114-152 (474)
201 COG4947 Uncharacterized protei 89.6 0.41 8.8E-06 31.7 2.7 42 9-50 90-131 (227)
202 COG3150 Predicted esterase [Ge 87.9 1.5 3.2E-05 28.8 4.4 35 7-41 46-80 (191)
203 KOG3967|consensus 87.8 0.9 2E-05 31.1 3.5 38 17-55 187-224 (297)
204 KOG3043|consensus 86.9 0.2 4.3E-06 34.1 0.0 41 3-43 103-143 (242)
205 COG1770 PtrB Protease II [Amin 84.8 2.1 4.6E-05 33.3 4.5 49 5-56 510-560 (682)
206 KOG2281|consensus 84.8 1.3 2.8E-05 34.7 3.4 51 8-61 712-765 (867)
207 TIGR03131 malonate_mdcH malona 83.7 2.8 6.1E-05 28.6 4.5 27 14-40 70-96 (295)
208 smart00827 PKS_AT Acyl transfe 83.6 2.8 6.1E-05 28.4 4.5 27 14-40 76-102 (298)
209 KOG2029|consensus 82.9 1.2 2.6E-05 34.3 2.6 37 19-55 525-569 (697)
210 KOG4372|consensus 82.3 0.53 1.2E-05 34.4 0.5 18 19-36 149-166 (405)
211 TIGR00128 fabD malonyl CoA-acy 82.3 3.2 6.9E-05 28.0 4.3 26 15-40 77-103 (290)
212 PF00698 Acyl_transf_1: Acyl t 81.8 1.9 4.2E-05 29.8 3.2 28 13-40 77-104 (318)
213 KOG2112|consensus 77.0 2.9 6.3E-05 27.9 2.7 26 18-43 91-116 (206)
214 TIGR02816 pfaB_fam PfaB family 75.1 5.7 0.00012 30.2 4.1 27 15-41 260-286 (538)
215 KOG2385|consensus 72.7 4.3 9.4E-05 31.0 2.9 43 16-58 443-487 (633)
216 PF04301 DUF452: Protein of un 72.6 6 0.00013 26.5 3.4 25 17-41 54-78 (213)
217 COG2939 Carboxypeptidase C (ca 71.6 8.3 0.00018 29.1 4.2 68 3-70 176-249 (498)
218 PF14253 AbiH: Bacteriophage a 71.2 3.2 7E-05 27.8 1.9 17 18-34 233-249 (270)
219 KOG2237|consensus 70.8 4.3 9.4E-05 31.7 2.6 44 4-47 531-576 (712)
220 PF03283 PAE: Pectinacetyleste 70.5 6.7 0.00015 28.2 3.4 35 4-38 138-174 (361)
221 COG0331 FabD (acyl-carrier-pro 69.6 7.8 0.00017 27.4 3.5 22 18-39 83-104 (310)
222 PF10081 Abhydrolase_9: Alpha/ 68.6 5.4 0.00012 28.0 2.6 39 20-58 109-147 (289)
223 PRK10279 hypothetical protein; 67.9 11 0.00024 26.4 4.0 29 14-42 27-55 (300)
224 cd00382 beta_CA Carbonic anhyd 67.5 7.7 0.00017 23.3 2.8 30 5-34 44-73 (119)
225 cd07225 Pat_PNPLA6_PNPLA7 Pata 64.1 15 0.00032 25.8 4.1 29 14-42 37-65 (306)
226 TIGR03712 acc_sec_asp2 accesso 63.7 11 0.00024 28.5 3.5 37 7-43 342-381 (511)
227 cd00883 beta_CA_cladeA Carboni 63.7 12 0.00025 24.2 3.3 33 5-37 66-98 (182)
228 COG3887 Predicted signaling pr 63.7 33 0.00072 26.8 6.0 36 19-58 337-378 (655)
229 cd07198 Patatin Patatin-like p 63.6 17 0.00037 22.8 4.0 29 15-43 21-49 (172)
230 PRK15219 carbonic anhydrase; P 56.8 27 0.00059 23.9 4.2 34 4-37 127-160 (245)
231 COG1752 RssA Predicted esteras 55.8 25 0.00055 24.3 4.1 30 13-42 32-61 (306)
232 cd07227 Pat_Fungal_NTE1 Fungal 55.1 26 0.00056 24.2 4.0 28 14-41 32-59 (269)
233 KOG1551|consensus 54.7 9.2 0.0002 27.1 1.7 27 17-43 192-218 (371)
234 PLN00416 carbonate dehydratase 54.6 22 0.00048 24.5 3.6 33 5-37 125-157 (258)
235 PRK08671 methionine aminopepti 53.8 8.5 0.00018 26.6 1.4 28 4-31 128-156 (291)
236 cd07209 Pat_hypo_Ecoli_Z1214_l 53.6 29 0.00063 22.7 3.9 27 16-42 22-48 (215)
237 PLN02752 [acyl-carrier protein 53.5 12 0.00025 26.3 2.1 18 23-40 127-144 (343)
238 cd03379 beta_CA_cladeD Carboni 53.3 22 0.00049 21.9 3.2 30 5-34 41-70 (142)
239 cd00884 beta_CA_cladeB Carboni 52.9 22 0.00048 23.2 3.3 33 6-38 73-105 (190)
240 cd07210 Pat_hypo_W_succinogene 52.9 33 0.00072 22.7 4.1 27 16-42 24-50 (221)
241 cd07212 Pat_PNPLA9 Patatin-lik 51.8 35 0.00077 23.9 4.3 20 23-42 35-54 (312)
242 COG2936 Predicted acyl esteras 51.6 32 0.0007 26.5 4.3 49 4-55 107-156 (563)
243 KOG2182|consensus 51.5 33 0.00072 26.1 4.3 50 2-54 151-203 (514)
244 cd01086 MetAP1 Methionine Amin 50.5 12 0.00027 24.5 1.8 30 4-33 135-165 (238)
245 cd01088 MetAP2 Methionine Amin 50.3 9.5 0.00021 26.4 1.3 28 4-31 127-155 (291)
246 KOG2551|consensus 49.1 9.8 0.00021 25.9 1.1 35 23-57 107-146 (230)
247 PF00091 Tubulin: Tubulin/FtsZ 49.0 21 0.00046 23.4 2.7 32 7-38 108-142 (216)
248 cd07207 Pat_ExoU_VipD_like Exo 48.9 66 0.0014 20.2 5.0 27 16-42 23-49 (194)
249 PLN03006 carbonate dehydratase 48.4 26 0.00055 24.9 3.1 32 6-37 158-189 (301)
250 PF02273 Acyl_transf_2: Acyl t 48.0 27 0.00058 24.5 3.1 37 3-40 85-121 (294)
251 cd07230 Pat_TGL4-5_like Triacy 47.9 37 0.00081 25.0 4.0 27 17-43 98-124 (421)
252 KOG3253|consensus 47.0 4.3 9.4E-05 31.7 -0.9 38 16-55 246-283 (784)
253 PF00484 Pro_CA: Carbonic anhy 47.0 49 0.0011 20.3 4.0 33 5-37 40-72 (153)
254 PLN02154 carbonic anhydrase 46.9 32 0.0007 24.2 3.4 34 5-38 151-184 (290)
255 PLN03014 carbonic anhydrase 46.2 29 0.00063 25.1 3.2 32 6-37 206-237 (347)
256 PF09994 DUF2235: Uncharacteri 45.8 40 0.00086 23.1 3.8 23 18-40 90-112 (277)
257 cd07232 Pat_PLPL Patain-like p 45.7 35 0.00075 25.0 3.6 27 17-43 92-118 (407)
258 PRK10437 carbonic anhydrase; P 45.4 37 0.00081 22.8 3.5 33 5-37 76-108 (220)
259 cd07224 Pat_like Patatin-like 45.2 58 0.0013 21.7 4.4 22 21-42 30-51 (233)
260 TIGR00501 met_pdase_II methion 44.8 13 0.00028 25.8 1.2 27 4-30 131-158 (295)
261 PRK07281 methionine aminopepti 44.3 22 0.00047 24.7 2.3 27 5-31 176-203 (286)
262 PLN03019 carbonic anhydrase 44.3 31 0.00068 24.8 3.1 32 6-37 201-232 (330)
263 KOG1202|consensus 42.6 27 0.00059 30.1 2.8 45 10-55 2172-2216(2376)
264 cd07208 Pat_hypo_Ecoli_yjju_li 42.5 1E+02 0.0022 20.6 5.5 23 22-44 29-51 (266)
265 COG1957 URH1 Inosine-uridine n 41.2 85 0.0018 22.3 4.9 50 7-59 106-155 (311)
266 PF09949 DUF2183: Uncharacteri 40.9 48 0.001 19.4 3.1 37 8-44 53-91 (100)
267 cd07228 Pat_NTE_like_bacteria 40.6 65 0.0014 20.2 3.9 29 15-43 23-51 (175)
268 PF00450 Peptidase_S10: Serine 40.5 77 0.0017 22.3 4.7 41 18-58 134-181 (415)
269 cd07222 Pat_PNPLA4 Patatin-lik 40.3 73 0.0016 21.4 4.3 20 23-43 34-53 (246)
270 PRK05716 methionine aminopepti 39.6 21 0.00045 23.7 1.6 29 4-32 145-174 (252)
271 cd03378 beta_CA_cladeC Carboni 39.5 48 0.001 21.0 3.2 31 5-35 77-107 (154)
272 cd07204 Pat_PNPLA_like Patatin 39.4 79 0.0017 21.2 4.4 20 23-42 34-53 (243)
273 PRK12318 methionine aminopepti 39.0 21 0.00045 24.8 1.5 27 5-31 186-213 (291)
274 COG4667 Predicted esterase of 38.9 99 0.0021 21.9 4.8 41 8-48 28-68 (292)
275 TIGR00500 met_pdase_I methioni 38.7 18 0.0004 23.9 1.2 29 5-33 144-173 (247)
276 COG3675 Predicted lipase [Lipi 37.8 20 0.00043 25.6 1.3 27 9-35 163-190 (332)
277 cd07218 Pat_iPLA2 Calcium-inde 36.9 95 0.0021 21.0 4.5 20 23-42 33-52 (245)
278 PRK12896 methionine aminopepti 36.9 21 0.00046 23.7 1.3 30 4-33 150-180 (255)
279 PRK12897 methionine aminopepti 36.8 34 0.00074 22.8 2.3 30 4-33 144-174 (248)
280 cd07229 Pat_TGL3_like Triacylg 35.9 66 0.0014 23.6 3.7 29 15-43 106-134 (391)
281 KOG4389|consensus 35.1 63 0.0014 24.9 3.6 37 1-37 194-235 (601)
282 PF00557 Peptidase_M24: Metall 34.6 13 0.00028 23.8 -0.0 27 4-30 129-157 (207)
283 TIGR02813 omega_3_PfaA polyket 34.6 68 0.0015 29.3 4.1 27 14-40 668-694 (2582)
284 cd07231 Pat_SDP1-like Sugar-De 34.2 83 0.0018 22.6 3.9 26 16-41 92-117 (323)
285 PF12242 Eno-Rase_NADH_b: NAD( 34.0 71 0.0015 18.1 2.9 38 4-41 21-61 (78)
286 COG0288 CynT Carbonic anhydras 33.8 51 0.0011 21.9 2.7 34 5-38 77-110 (207)
287 cd01066 APP_MetAP A family inc 33.4 26 0.00057 21.8 1.3 26 5-30 130-157 (207)
288 TIGR02993 ectoine_eutD ectoine 32.8 32 0.0007 24.7 1.8 27 5-31 298-324 (391)
289 COG2453 CDC14 Predicted protei 31.9 49 0.0011 21.1 2.4 37 5-41 90-130 (180)
290 cd07220 Pat_PNPLA2 Patatin-lik 31.9 1.1E+02 0.0025 20.7 4.2 21 22-42 38-58 (249)
291 cd07206 Pat_TGL3-4-5_SDP1 Tria 31.4 1.1E+02 0.0024 21.6 4.2 25 17-41 94-118 (298)
292 COG2201 CheB Chemotaxis respon 31.4 82 0.0018 22.8 3.6 50 20-77 157-207 (350)
293 cd06143 PAN2_exo DEDDh 3'-5' e 30.5 78 0.0017 20.6 3.1 28 6-34 88-115 (174)
294 cd07221 Pat_PNPLA3 Patatin-lik 30.4 1.4E+02 0.003 20.4 4.4 21 22-42 34-54 (252)
295 smart00864 Tubulin Tubulin/Fts 28.7 53 0.0011 21.1 2.1 26 9-34 72-97 (192)
296 cd01819 Patatin_and_cPLA2 Pata 28.3 1.3E+02 0.0029 18.5 3.8 19 20-38 28-46 (155)
297 cd01090 Creatinase Creatine am 27.9 41 0.00088 22.3 1.5 27 5-31 137-165 (228)
298 PF07643 DUF1598: Protein of u 27.7 1.3E+02 0.0028 17.3 4.0 35 5-39 28-62 (84)
299 cd01092 APP-like Similar to Pr 26.3 41 0.00088 21.3 1.3 28 4-31 130-159 (208)
300 KOG1578|consensus 25.9 44 0.00095 23.4 1.4 28 8-35 142-169 (276)
301 COG1505 Serine proteases of th 24.5 9.7 0.00021 29.5 -2.1 42 3-44 481-524 (648)
302 PF01872 RibD_C: RibD C-termin 24.3 2E+02 0.0043 18.3 4.4 48 5-60 122-169 (200)
303 cd07205 Pat_PNPLA6_PNPLA7_NTE1 23.9 1.9E+02 0.0041 17.9 5.1 26 17-42 25-50 (175)
304 PF02044 Bombesin: Bombesin-li 23.8 5.2 0.00011 15.2 -2.0 8 23-30 4-11 (14)
305 PRK09795 aminopeptidase; Provi 23.8 45 0.00097 23.6 1.2 27 5-31 268-296 (361)
306 PLN03158 methionine aminopepti 23.7 55 0.0012 24.0 1.6 29 4-32 277-306 (396)
307 cd07211 Pat_PNPLA8 Patatin-lik 23.4 1.5E+02 0.0031 20.5 3.6 16 24-39 45-60 (308)
308 PF01734 Patatin: Patatin-like 22.6 1E+02 0.0023 18.4 2.6 21 20-40 27-47 (204)
309 cd07213 Pat17_PNPLA8_PNPLA9_li 22.1 1E+02 0.0022 21.1 2.6 20 23-42 37-56 (288)
310 PLN03016 sinapoylglucose-malat 21.8 94 0.002 23.0 2.5 21 19-39 164-184 (433)
311 PRK11789 N-acetyl-anhydromuran 21.7 90 0.002 20.4 2.2 24 6-29 135-158 (185)
312 PF13289 SIR2_2: SIR2-like dom 21.6 1.5E+02 0.0033 17.3 3.1 21 12-32 79-99 (143)
313 cd07217 Pat17_PNPLA8_PNPLA9_li 21.2 1.1E+02 0.0024 21.8 2.7 19 23-41 44-62 (344)
314 KOG1387|consensus 21.0 31 0.00068 25.4 -0.1 26 17-42 124-150 (465)
315 cd00455 nuc_hydro nuc_hydro: N 20.9 2.8E+02 0.0061 19.1 4.6 36 21-57 113-148 (295)
316 KOG2308|consensus 20.8 22 0.00048 28.2 -0.9 22 20-41 417-438 (741)
317 cd02201 FtsZ_type1 FtsZ is a G 20.7 1.2E+02 0.0026 21.1 2.8 29 9-37 74-102 (304)
318 PF15566 Imm18: Immunity prote 20.7 99 0.0021 16.2 1.8 24 10-33 11-34 (52)
319 PRK14576 putative endopeptidas 20.6 56 0.0012 23.6 1.2 30 5-34 312-343 (405)
320 TIGR00065 ftsZ cell division p 20.2 1.3E+02 0.0029 21.6 3.0 29 9-37 91-119 (349)
No 1
>KOG2624|consensus
Probab=99.52 E-value=1.1e-14 Score=103.95 Aligned_cols=74 Identities=59% Similarity=1.010 Sum_probs=67.1
Q ss_pred CCcccHHHHHHHHHHHhCCCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeeccccccccCChHHHHHHHhh
Q psy5051 1 MGIYDLPVVIDYILSVTGQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPIAFINHVKSPVIRFLATI 74 (87)
Q Consensus 1 ~a~~D~~~~i~~v~~~~~~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~~~~~~~~~~~~~~l~~~ 74 (87)
||.||+|++||++++.++.++++++|||||+++.+..++.+|+..++|+.+.+++|+++..+..+++.+....+
T Consensus 142 m~~yDLPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~~~k~~~~~~~~~~~~~ 215 (403)
T KOG2624|consen 142 MGTYDLPAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAAFPKHIKSLLNKFLDPF 215 (403)
T ss_pred hhhcCHHHHHHHHHHhccccceEEEEEEccchhheehhcccchhhhhhheeeeecchhhhcccccHHHHhhhhh
Confidence 68999999999999999999999999999999999999999999999999999999998887777765555444
No 2
>PLN02872 triacylglycerol lipase
Probab=99.27 E-value=4.3e-12 Score=90.62 Aligned_cols=69 Identities=32% Similarity=0.632 Sum_probs=59.1
Q ss_pred CcccHHHHHHHHHHHhCCCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeeccccccccCChHHHHHHH
Q psy5051 2 GIYDLPVVIDYILSVTGQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPIAFINHVKSPVIRFLA 72 (87)
Q Consensus 2 a~~D~~~~i~~v~~~~~~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~~~~~~~~~~~~~~l~ 72 (87)
+.+|++++++++++..+ ++++++||||||.+++.++ .+|+..++++.+++++|..+..+..+++.+.+.
T Consensus 143 a~~Dl~a~id~i~~~~~-~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~l~P~~~~~~~~~~~~~~~~ 211 (395)
T PLN02872 143 ALYDLAEMIHYVYSITN-SKIFIVGHSQGTIMSLAAL-TQPNVVEMVEAAALLCPISYLDHVTAPLVLRMV 211 (395)
T ss_pred HHHHHHHHHHHHHhccC-CceEEEEECHHHHHHHHHh-hChHHHHHHHHHHHhcchhhhccCCCHHHHHHH
Confidence 45899999999987655 7999999999999998655 689988899999999999999888888765444
No 3
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.14 E-value=9.4e-11 Score=75.26 Aligned_cols=52 Identities=23% Similarity=0.436 Sum_probs=46.6
Q ss_pred cccHHHHHHHHHHHhCCCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeeccc
Q psy5051 3 IYDLPVVIDYILSVTGQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPI 57 (87)
Q Consensus 3 ~~D~~~~i~~v~~~~~~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~ 57 (87)
.+|+.+.++.+++.++.++++++||||||.+++.+++.+|+ ++++++++++.
T Consensus 27 ~~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~p~---~v~~lvl~~~~ 78 (230)
T PF00561_consen 27 TDDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQYPE---RVKKLVLISPP 78 (230)
T ss_dssp HHHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHSGG---GEEEEEEESES
T ss_pred HHHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHCch---hhcCcEEEeee
Confidence 45788899999999999999999999999999999999999 67777888774
No 4
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=98.87 E-value=4.8e-09 Score=70.97 Aligned_cols=51 Identities=14% Similarity=0.038 Sum_probs=41.3
Q ss_pred ccHHHHHHHH---HHHhCCCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeeccc
Q psy5051 4 YDLPVVIDYI---LSVTGQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPI 57 (87)
Q Consensus 4 ~D~~~~i~~v---~~~~~~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~ 57 (87)
|++.++.+++ ++..+.++++++||||||.+++.++..+|+ +++++++++|.
T Consensus 83 ~~~~~~a~~l~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~---~v~~lili~~~ 136 (294)
T PLN02824 83 YTFETWGEQLNDFCSDVVGDPAFVICNSVGGVVGLQAAVDAPE---LVRGVMLINIS 136 (294)
T ss_pred CCHHHHHHHHHHHHHHhcCCCeEEEEeCHHHHHHHHHHHhChh---heeEEEEECCC
Confidence 5566655555 456678999999999999999999999998 67778888764
No 5
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=98.86 E-value=5.4e-09 Score=70.24 Aligned_cols=50 Identities=20% Similarity=0.183 Sum_probs=40.3
Q ss_pred HHHHHHHHHHhCCCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeeccccc
Q psy5051 7 PVVIDYILSVTGQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPIAF 59 (87)
Q Consensus 7 ~~~i~~v~~~~~~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~~~ 59 (87)
.+.++.+++..+.++++++||||||.+++.++..+|+ ++++++++++...
T Consensus 78 ~~~~~~~i~~l~~~~~~LvG~S~GG~va~~~a~~~p~---~v~~lvl~~~~~~ 127 (276)
T TIGR02240 78 AKLAARMLDYLDYGQVNAIGVSWGGALAQQFAHDYPE---RCKKLILAATAAG 127 (276)
T ss_pred HHHHHHHHHHhCcCceEEEEECHHHHHHHHHHHHCHH---HhhheEEeccCCc
Confidence 3344445667778899999999999999999999998 6888888887643
No 6
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=98.83 E-value=9.7e-09 Score=71.66 Aligned_cols=55 Identities=20% Similarity=0.269 Sum_probs=46.7
Q ss_pred ccHHHHHHHHHHHhCCCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeeccccccc
Q psy5051 4 YDLPVVIDYILSVTGQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPIAFIN 61 (87)
Q Consensus 4 ~D~~~~i~~v~~~~~~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~~~~~ 61 (87)
+|+++.++++++..+.++++++||||||.+++.+++.+|+ +++++++++|.....
T Consensus 120 ~~~~~~v~~l~~~~~~~~i~lvGhS~GG~i~~~~~~~~~~---~v~~lv~~~~p~~~~ 174 (350)
T TIGR01836 120 GYIDKCVDYICRTSKLDQISLLGICQGGTFSLCYAALYPD---KIKNLVTMVTPVDFE 174 (350)
T ss_pred HHHHHHHHHHHHHhCCCcccEEEECHHHHHHHHHHHhCch---heeeEEEeccccccC
Confidence 3577888899998898999999999999999999999987 677888888765443
No 7
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=98.81 E-value=1.1e-08 Score=70.70 Aligned_cols=54 Identities=22% Similarity=0.345 Sum_probs=43.8
Q ss_pred cHHHHHHHHHHHhCCCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeeccccccc
Q psy5051 5 DLPVVIDYILSVTGQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPIAFIN 61 (87)
Q Consensus 5 D~~~~i~~v~~~~~~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~~~~~ 61 (87)
|+.+.++.+.+.....+++++||||||.+++.++.+++. ++.++++.+|.....
T Consensus 92 dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~---~i~~~vLssP~~~l~ 145 (298)
T COG2267 92 DLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPP---RIDGLVLSSPALGLG 145 (298)
T ss_pred HHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCc---cccEEEEECccccCC
Confidence 455555555554566899999999999999999999985 788999999977665
No 8
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=98.80 E-value=1.2e-08 Score=64.30 Aligned_cols=49 Identities=22% Similarity=0.383 Sum_probs=40.8
Q ss_pred HHHHHHHHHhCCCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeeccccc
Q psy5051 8 VVIDYILSVTGQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPIAF 59 (87)
Q Consensus 8 ~~i~~v~~~~~~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~~~ 59 (87)
+.+..+++..+.++++++|||+||.+++.++..+|+ +++++++++|...
T Consensus 54 ~~l~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~---~v~~~vl~~~~~~ 102 (228)
T PF12697_consen 54 EDLAELLDALGIKKVILVGHSMGGMIALRLAARYPD---RVKGLVLLSPPPP 102 (228)
T ss_dssp HHHHHHHHHTTTSSEEEEEETHHHHHHHHHHHHSGG---GEEEEEEESESSS
T ss_pred hhhhhccccccccccccccccccccccccccccccc---ccccceeeccccc
Confidence 344455667777899999999999999999999998 7888889998764
No 9
>KOG4409|consensus
Probab=98.79 E-value=1.3e-08 Score=71.72 Aligned_cols=51 Identities=25% Similarity=0.373 Sum_probs=42.6
Q ss_pred HHHHHHHHhCCCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeecccccccc
Q psy5051 9 VIDYILSVTGQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPIAFINH 62 (87)
Q Consensus 9 ~i~~v~~~~~~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~~~~~~ 62 (87)
-++..+...+.+|.+++|||+||.++..||..||+ +|+.+++.+|.+....
T Consensus 149 siE~WR~~~~L~KmilvGHSfGGYLaa~YAlKyPe---rV~kLiLvsP~Gf~~~ 199 (365)
T KOG4409|consen 149 SIEQWRKKMGLEKMILVGHSFGGYLAAKYALKYPE---RVEKLILVSPWGFPEK 199 (365)
T ss_pred HHHHHHHHcCCcceeEeeccchHHHHHHHHHhChH---hhceEEEecccccccC
Confidence 34445667889999999999999999999999999 5777789999876653
No 10
>PRK10749 lysophospholipase L2; Provisional
Probab=98.75 E-value=2e-08 Score=69.66 Aligned_cols=38 Identities=24% Similarity=0.353 Sum_probs=33.4
Q ss_pred CCCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeecccc
Q psy5051 18 GQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPIA 58 (87)
Q Consensus 18 ~~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~~ 58 (87)
+..+++++||||||.++..++..+|+ .++++++++|..
T Consensus 129 ~~~~~~l~GhSmGG~ia~~~a~~~p~---~v~~lvl~~p~~ 166 (330)
T PRK10749 129 PYRKRYALAHSMGGAILTLFLQRHPG---VFDAIALCAPMF 166 (330)
T ss_pred CCCCeEEEEEcHHHHHHHHHHHhCCC---CcceEEEECchh
Confidence 56799999999999999999999998 577788888864
No 11
>PLN02965 Probable pheophorbidase
Probab=98.72 E-value=2e-08 Score=66.91 Aligned_cols=51 Identities=24% Similarity=0.169 Sum_probs=39.4
Q ss_pred ccHHHHHHHH---HHHhCC-CceeEEEEChHHHHHHHHHHhCCchhhhhhheeeeccc
Q psy5051 4 YDLPVVIDYI---LSVTGQ-PKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPI 57 (87)
Q Consensus 4 ~D~~~~i~~v---~~~~~~-~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~ 57 (87)
+++.++.+++ ++..+. ++++++||||||.++..++.++|+ ++++++++++.
T Consensus 52 ~~~~~~a~dl~~~l~~l~~~~~~~lvGhSmGG~ia~~~a~~~p~---~v~~lvl~~~~ 106 (255)
T PLN02965 52 SSSDQYNRPLFALLSDLPPDHKVILVGHSIGGGSVTEALCKFTD---KISMAIYVAAA 106 (255)
T ss_pred CCHHHHHHHHHHHHHhcCCCCCEEEEecCcchHHHHHHHHhCch---heeEEEEEccc
Confidence 4566665554 455665 499999999999999999999998 56677777764
No 12
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=98.72 E-value=2.8e-08 Score=66.30 Aligned_cols=48 Identities=23% Similarity=0.315 Sum_probs=39.9
Q ss_pred HHHHHHHHHHhCCCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeeccc
Q psy5051 7 PVVIDYILSVTGQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPI 57 (87)
Q Consensus 7 ~~~i~~v~~~~~~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~ 57 (87)
...+..+++..+.++++++||||||.+++.++..+|+ +++++++++|.
T Consensus 88 ~~~l~~~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~---~v~~lvl~~~~ 135 (282)
T TIGR03343 88 ARAVKGLMDALDIEKAHLVGNSMGGATALNFALEYPD---RIGKLILMGPG 135 (282)
T ss_pred HHHHHHHHHHcCCCCeeEEEECchHHHHHHHHHhChH---hhceEEEECCC
Confidence 3445566677888999999999999999999999998 67777888765
No 13
>PRK03592 haloalkane dehalogenase; Provisional
Probab=98.72 E-value=3.2e-08 Score=66.95 Aligned_cols=51 Identities=18% Similarity=0.378 Sum_probs=40.2
Q ss_pred ccHHHHHHH---HHHHhCCCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeeccc
Q psy5051 4 YDLPVVIDY---ILSVTGQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPI 57 (87)
Q Consensus 4 ~D~~~~i~~---v~~~~~~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~ 57 (87)
+++..+.++ +++..+.++++++||||||.+++.++.++|+ ++++++++++.
T Consensus 74 ~~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~---~v~~lil~~~~ 127 (295)
T PRK03592 74 YTFADHARYLDAWFDALGLDDVVLVGHDWGSALGFDWAARHPD---RVRGIAFMEAI 127 (295)
T ss_pred CCHHHHHHHHHHHHHHhCCCCeEEEEECHHHHHHHHHHHhChh---heeEEEEECCC
Confidence 344554444 4556778999999999999999999999998 57777888863
No 14
>PHA02857 monoglyceride lipase; Provisional
Probab=98.71 E-value=4.1e-08 Score=65.71 Aligned_cols=40 Identities=28% Similarity=0.378 Sum_probs=33.9
Q ss_pred hCCCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeeccccc
Q psy5051 17 TGQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPIAF 59 (87)
Q Consensus 17 ~~~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~~~ 59 (87)
.+.++++++||||||.+++.++..+|+ .++++++++|...
T Consensus 94 ~~~~~~~lvG~S~GG~ia~~~a~~~p~---~i~~lil~~p~~~ 133 (276)
T PHA02857 94 YPGVPVFLLGHSMGATISILAAYKNPN---LFTAMILMSPLVN 133 (276)
T ss_pred CCCCCEEEEEcCchHHHHHHHHHhCcc---ccceEEEeccccc
Confidence 344689999999999999999999998 5778899998654
No 15
>PRK10349 carboxylesterase BioH; Provisional
Probab=98.71 E-value=4.6e-08 Score=64.81 Aligned_cols=50 Identities=18% Similarity=0.354 Sum_probs=40.5
Q ss_pred ccHHHHHHHHHHHhCCCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeeccc
Q psy5051 4 YDLPVVIDYILSVTGQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPI 57 (87)
Q Consensus 4 ~D~~~~i~~v~~~~~~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~ 57 (87)
+++.++++.+.+ ...++++++||||||.+++.++..+|+ ++++++++++.
T Consensus 59 ~~~~~~~~~l~~-~~~~~~~lvGhS~Gg~ia~~~a~~~p~---~v~~lili~~~ 108 (256)
T PRK10349 59 LSLADMAEAVLQ-QAPDKAIWLGWSLGGLVASQIALTHPE---RVQALVTVASS 108 (256)
T ss_pred CCHHHHHHHHHh-cCCCCeEEEEECHHHHHHHHHHHhChH---hhheEEEecCc
Confidence 466777777765 456899999999999999999999998 56667777653
No 16
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=98.70 E-value=3.6e-08 Score=68.80 Aligned_cols=51 Identities=22% Similarity=0.268 Sum_probs=40.2
Q ss_pred cHHHHHHHHHHHhCCCc-eeEEEEChHHHHHHHHHHhCCchhhhhhheeeecccc
Q psy5051 5 DLPVVIDYILSVTGQPK-LSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPIA 58 (87)
Q Consensus 5 D~~~~i~~v~~~~~~~~-~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~~ 58 (87)
|+.+.+..+++.++.++ ++++||||||.+++.++..+|+ ++++++++++..
T Consensus 111 ~~~~~~~~~~~~l~~~~~~~l~G~S~Gg~ia~~~a~~~p~---~v~~lvl~~~~~ 162 (351)
T TIGR01392 111 DDVKAQKLLLDHLGIEQIAAVVGGSMGGMQALEWAIDYPE---RVRAIVVLATSA 162 (351)
T ss_pred HHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChH---hhheEEEEccCC
Confidence 33444444567788888 9999999999999999999998 577778887654
No 17
>PRK07581 hypothetical protein; Validated
Probab=98.69 E-value=3.2e-08 Score=68.44 Aligned_cols=41 Identities=20% Similarity=0.263 Sum_probs=33.8
Q ss_pred HHHHhCCCc-eeEEEEChHHHHHHHHHHhCCchhhhhhheeeecc
Q psy5051 13 ILSVTGQPK-LSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAP 56 (87)
Q Consensus 13 v~~~~~~~~-~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p 56 (87)
+++.++.++ .+++||||||.+++.++.++|++ +++++++++
T Consensus 116 l~~~lgi~~~~~lvG~S~GG~va~~~a~~~P~~---V~~Lvli~~ 157 (339)
T PRK07581 116 LTEKFGIERLALVVGWSMGAQQTYHWAVRYPDM---VERAAPIAG 157 (339)
T ss_pred HHHHhCCCceEEEEEeCHHHHHHHHHHHHCHHH---Hhhheeeec
Confidence 567789999 47999999999999999999995 555566653
No 18
>PRK00870 haloalkane dehalogenase; Provisional
Probab=98.69 E-value=4.2e-08 Score=66.74 Aligned_cols=51 Identities=10% Similarity=0.238 Sum_probs=39.6
Q ss_pred ccHHHHHHHH---HHHhCCCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeeccc
Q psy5051 4 YDLPVVIDYI---LSVTGQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPI 57 (87)
Q Consensus 4 ~D~~~~i~~v---~~~~~~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~ 57 (87)
+++..+++++ +++.+.++++++||||||.++..++..+|+ ++.++++++|.
T Consensus 96 ~~~~~~a~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~~~ 149 (302)
T PRK00870 96 YTYARHVEWMRSWFEQLDLTDVTLVCQDWGGLIGLRLAAEHPD---RFARLVVANTG 149 (302)
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEEEEChHHHHHHHHHHhChh---heeEEEEeCCC
Confidence 4455555554 456778899999999999999999999998 56677777763
No 19
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=98.68 E-value=4.5e-08 Score=68.11 Aligned_cols=50 Identities=18% Similarity=0.355 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHhCCCce-eEEEEChHHHHHHHHHHhCCchhhhhhheeeecccc
Q psy5051 6 LPVVIDYILSVTGQPKL-SYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPIA 58 (87)
Q Consensus 6 ~~~~i~~v~~~~~~~~~-~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~~ 58 (87)
+.+.+..+++..+.++. +++||||||.+++.++.++|+ ++++++++++..
T Consensus 123 ~a~dl~~ll~~l~l~~~~~lvG~SmGG~vA~~~A~~~P~---~V~~LvLi~s~~ 173 (343)
T PRK08775 123 QADAIALLLDALGIARLHAFVGYSYGALVGLQFASRHPA---RVRTLVVVSGAH 173 (343)
T ss_pred HHHHHHHHHHHcCCCcceEEEEECHHHHHHHHHHHHChH---hhheEEEECccc
Confidence 33344445567777665 799999999999999999998 577778887643
No 20
>KOG1454|consensus
Probab=98.67 E-value=5.9e-08 Score=67.94 Aligned_cols=56 Identities=18% Similarity=0.204 Sum_probs=43.7
Q ss_pred HHHHHHHHHhCCCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeeccccccccC
Q psy5051 8 VVIDYILSVTGQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPIAFINHV 63 (87)
Q Consensus 8 ~~i~~v~~~~~~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~~~~~~~ 63 (87)
.++.+......+++++++|||+||.+++.+|+.+|+.++++..+.+++|..+....
T Consensus 116 ~~i~~~~~~~~~~~~~lvghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~ 171 (326)
T KOG1454|consen 116 ELIRRFVKEVFVEPVSLVGHSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTPK 171 (326)
T ss_pred HHHHHHHHhhcCcceEEEEeCcHHHHHHHHHHhCcccccceeeecccccccccCCc
Confidence 34455556678889999999999999999999999977776655577776665443
No 21
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=98.67 E-value=1.1e-07 Score=65.57 Aligned_cols=52 Identities=17% Similarity=0.191 Sum_probs=38.6
Q ss_pred cHHHHHHHHHHH--hCCCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeeccccc
Q psy5051 5 DLPVVIDYILSV--TGQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPIAF 59 (87)
Q Consensus 5 D~~~~i~~v~~~--~~~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~~~ 59 (87)
|+.++++.+... ....+++++||||||.+++.++..+|+ +++++++++|...
T Consensus 117 D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~---~v~~lvl~~~~~~ 170 (330)
T PLN02298 117 DCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPE---GFDGAVLVAPMCK 170 (330)
T ss_pred HHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcc---cceeEEEeccccc
Confidence 444555555432 223479999999999999999999997 6778889888654
No 22
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=98.67 E-value=6.1e-08 Score=70.35 Aligned_cols=53 Identities=21% Similarity=0.318 Sum_probs=43.3
Q ss_pred cHHHHHHHHHHHhCCCceeEEEEChHHHHHHHHHHhCCchh-hhhhheeeeccc
Q psy5051 5 DLPVVIDYILSVTGQPKLSYIGHSMGTTMFWVLLSEKPEYN-DKIEVMIGMAPI 57 (87)
Q Consensus 5 D~~~~i~~v~~~~~~~~~~lvGHS~Gg~i~~~~a~~~p~~~-~~l~~~v~~~p~ 57 (87)
++...++.+.+..+.++++++||||||.++..++..+|+.. +.++.+|++++.
T Consensus 147 ~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~~fl~~~p~~~~k~I~~~I~la~P 200 (440)
T PLN02733 147 GLKKKLETVYKASGGKKVNIISHSMGGLLVKCFMSLHSDVFEKYVNSWIAIAAP 200 (440)
T ss_pred HHHHHHHHHHHHcCCCCEEEEEECHhHHHHHHHHHHCCHhHHhHhccEEEECCC
Confidence 55666777777788899999999999999999999888753 457788888764
No 23
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=98.66 E-value=6.9e-08 Score=61.84 Aligned_cols=50 Identities=14% Similarity=0.298 Sum_probs=40.6
Q ss_pred ccHHHHHHHHHHHhCCCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeeccc
Q psy5051 4 YDLPVVIDYILSVTGQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPI 57 (87)
Q Consensus 4 ~D~~~~i~~v~~~~~~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~ 57 (87)
+++.++++.+.+... ++++++||||||.+++.++.++|+ ++++++++++.
T Consensus 50 ~~~~~~~~~~~~~~~-~~~~lvG~S~Gg~~a~~~a~~~p~---~v~~~il~~~~ 99 (245)
T TIGR01738 50 LSLADAAEAIAAQAP-DPAIWLGWSLGGLVALHIAATHPD---RVRALVTVASS 99 (245)
T ss_pred cCHHHHHHHHHHhCC-CCeEEEEEcHHHHHHHHHHHHCHH---hhheeeEecCC
Confidence 577788888777654 689999999999999999999998 56666777653
No 24
>PRK10673 acyl-CoA esterase; Provisional
Probab=98.65 E-value=5.7e-08 Score=63.90 Aligned_cols=49 Identities=24% Similarity=0.506 Sum_probs=37.4
Q ss_pred ccHHHHHHHH---HHHhCCCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeec
Q psy5051 4 YDLPVVIDYI---LSVTGQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMA 55 (87)
Q Consensus 4 ~D~~~~i~~v---~~~~~~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~ 55 (87)
+++..+++++ ++..+.++++++||||||.+++.++..+|+ +++++++++
T Consensus 62 ~~~~~~~~d~~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~~~---~v~~lvli~ 113 (255)
T PRK10673 62 MNYPAMAQDLLDTLDALQIEKATFIGHSMGGKAVMALTALAPD---RIDKLVAID 113 (255)
T ss_pred CCHHHHHHHHHHHHHHcCCCceEEEEECHHHHHHHHHHHhCHh---hcceEEEEe
Confidence 3455555554 455677889999999999999999999988 566667764
No 25
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=98.65 E-value=5.1e-08 Score=62.53 Aligned_cols=47 Identities=15% Similarity=0.247 Sum_probs=36.2
Q ss_pred HHHHHHHHHhCCCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeeccc
Q psy5051 8 VVIDYILSVTGQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPI 57 (87)
Q Consensus 8 ~~i~~v~~~~~~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~ 57 (87)
+.+..+++..+.++++++|||+||.+++.++..+|+ ++.+++++++.
T Consensus 67 ~~~~~~i~~~~~~~v~liG~S~Gg~~a~~~a~~~p~---~v~~li~~~~~ 113 (251)
T TIGR02427 67 DDVLALLDHLGIERAVFCGLSLGGLIAQGLAARRPD---RVRALVLSNTA 113 (251)
T ss_pred HHHHHHHHHhCCCceEEEEeCchHHHHHHHHHHCHH---HhHHHhhccCc
Confidence 344444556677899999999999999999999887 46666676654
No 26
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=98.65 E-value=6.4e-08 Score=63.49 Aligned_cols=46 Identities=15% Similarity=0.173 Sum_probs=36.3
Q ss_pred HHHHHHHHhCCCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeeccc
Q psy5051 9 VIDYILSVTGQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPI 57 (87)
Q Consensus 9 ~i~~v~~~~~~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~ 57 (87)
.+..+++..+.++++++||||||.+++.++..+|+ +++++++.++.
T Consensus 85 ~~~~~~~~~~~~~~~liG~S~Gg~ia~~~a~~~p~---~v~~lvl~~~~ 130 (288)
T TIGR01250 85 ELEEVREKLGLDKFYLLGHSWGGMLAQEYALKYGQ---HLKGLIISSML 130 (288)
T ss_pred HHHHHHHHcCCCcEEEEEeehHHHHHHHHHHhCcc---ccceeeEeccc
Confidence 34444667778889999999999999999999998 46666766653
No 27
>PRK03204 haloalkane dehalogenase; Provisional
Probab=98.63 E-value=5.7e-08 Score=66.08 Aligned_cols=51 Identities=12% Similarity=0.168 Sum_probs=40.5
Q ss_pred cHHHHHHHHHHHhCCCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeecccc
Q psy5051 5 DLPVVIDYILSVTGQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPIA 58 (87)
Q Consensus 5 D~~~~i~~v~~~~~~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~~ 58 (87)
|+.+.+..+++..+.++++++||||||.++..++..+|+ ++++++++++..
T Consensus 86 ~~~~~~~~~~~~~~~~~~~lvG~S~Gg~va~~~a~~~p~---~v~~lvl~~~~~ 136 (286)
T PRK03204 86 EHARVIGEFVDHLGLDRYLSMGQDWGGPISMAVAVERAD---RVRGVVLGNTWF 136 (286)
T ss_pred HHHHHHHHHHHHhCCCCEEEEEECccHHHHHHHHHhChh---heeEEEEECccc
Confidence 344555566677888999999999999999999999998 566677776543
No 28
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=98.63 E-value=1.1e-07 Score=62.19 Aligned_cols=51 Identities=12% Similarity=-0.002 Sum_probs=38.7
Q ss_pred cHHHHHHHH---HHHhCCCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeeccc
Q psy5051 5 DLPVVIDYI---LSVTGQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPI 57 (87)
Q Consensus 5 D~~~~i~~v---~~~~~~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~ 57 (87)
++....+++ ++..+.++++++||||||.+++.++..+|+. +++++++.++.
T Consensus 48 ~~~~~~~~l~~~l~~~~~~~~~lvG~S~Gg~va~~~a~~~~~~--~v~~lvl~~~~ 101 (242)
T PRK11126 48 GFADVSRLLSQTLQSYNILPYWLVGYSLGGRIAMYYACQGLAG--GLCGLIVEGGN 101 (242)
T ss_pred CHHHHHHHHHHHHHHcCCCCeEEEEECHHHHHHHHHHHhCCcc--cccEEEEeCCC
Confidence 444444444 4566788999999999999999999998762 47777877654
No 29
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=98.62 E-value=1.3e-07 Score=67.62 Aligned_cols=50 Identities=26% Similarity=0.305 Sum_probs=39.2
Q ss_pred cHHHHHHHHHHHhCCCcee-EEEEChHHHHHHHHHHhCCchhhhhhheeeeccc
Q psy5051 5 DLPVVIDYILSVTGQPKLS-YIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPI 57 (87)
Q Consensus 5 D~~~~i~~v~~~~~~~~~~-lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~ 57 (87)
|+.+.+..+++.++.++++ ++||||||++++.++.++|+ +++.+++++..
T Consensus 145 d~~~~~~~ll~~lgi~~~~~vvG~SmGG~ial~~a~~~P~---~v~~lv~ia~~ 195 (389)
T PRK06765 145 DFVRVQKELIKSLGIARLHAVMGPSMGGMQAQEWAVHYPH---MVERMIGVIGN 195 (389)
T ss_pred HHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChH---hhheEEEEecC
Confidence 3444445566788999997 99999999999999999999 56666777543
No 30
>PRK06489 hypothetical protein; Provisional
Probab=98.62 E-value=1e-07 Score=66.79 Aligned_cols=51 Identities=24% Similarity=0.412 Sum_probs=39.7
Q ss_pred ccHHHHHHHH----HHHhCCCcee-EEEEChHHHHHHHHHHhCCchhhhhhheeeeccc
Q psy5051 4 YDLPVVIDYI----LSVTGQPKLS-YIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPI 57 (87)
Q Consensus 4 ~D~~~~i~~v----~~~~~~~~~~-lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~ 57 (87)
|++..+++.+ .+..+.++++ ++||||||.+++.++..+|+ ++++++++++.
T Consensus 133 ~~~~~~a~~~~~~l~~~lgi~~~~~lvG~SmGG~vAl~~A~~~P~---~V~~LVLi~s~ 188 (360)
T PRK06489 133 YDYDDMVEAQYRLVTEGLGVKHLRLILGTSMGGMHAWMWGEKYPD---FMDALMPMASQ 188 (360)
T ss_pred ccHHHHHHHHHHHHHHhcCCCceeEEEEECHHHHHHHHHHHhCch---hhheeeeeccC
Confidence 5666666553 3567788886 89999999999999999998 56666777654
No 31
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=98.62 E-value=8e-08 Score=62.30 Aligned_cols=47 Identities=15% Similarity=0.301 Sum_probs=37.2
Q ss_pred HHHHHHHHhCCCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeecccc
Q psy5051 9 VIDYILSVTGQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPIA 58 (87)
Q Consensus 9 ~i~~v~~~~~~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~~ 58 (87)
.+..+.+..+.++++++||||||.+++.++..+|+ ++++++++++..
T Consensus 69 ~~~~~i~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~---~v~~~i~~~~~~ 115 (257)
T TIGR03611 69 DVLQLLDALNIERFHFVGHALGGLIGLQLALRYPE---RLLSLVLINAWS 115 (257)
T ss_pred HHHHHHHHhCCCcEEEEEechhHHHHHHHHHHChH---HhHHheeecCCC
Confidence 34444556778899999999999999999999987 577777777643
No 32
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=98.61 E-value=1e-07 Score=69.90 Aligned_cols=45 Identities=18% Similarity=0.325 Sum_probs=38.2
Q ss_pred HHHHHhCCCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeeccccc
Q psy5051 12 YILSVTGQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPIAF 59 (87)
Q Consensus 12 ~v~~~~~~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~~~ 59 (87)
.+++..+.++++++||||||.+++.++..+|+ +++++++++|..+
T Consensus 266 ~ll~~lg~~k~~LVGhSmGG~iAl~~A~~~Pe---~V~~LVLi~~~~~ 310 (481)
T PLN03087 266 SVLERYKVKSFHIVAHSLGCILALALAVKHPG---AVKSLTLLAPPYY 310 (481)
T ss_pred HHHHHcCCCCEEEEEECHHHHHHHHHHHhChH---hccEEEEECCCcc
Confidence 34567888999999999999999999999998 6777788887543
No 33
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=98.60 E-value=1.2e-07 Score=64.80 Aligned_cols=54 Identities=13% Similarity=0.281 Sum_probs=40.6
Q ss_pred cHHHHHHHHHHHhCCCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeecccccccc
Q psy5051 5 DLPVVIDYILSVTGQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPIAFINH 62 (87)
Q Consensus 5 D~~~~i~~v~~~~~~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~~~~~~ 62 (87)
|+.+.++++.+ .+.++++++||||||.+++.++..+|+ ++.++++++|......
T Consensus 85 Dv~~ai~~L~~-~~~~~v~LvG~SmGG~vAl~~A~~~p~---~v~~lVL~~P~~~g~~ 138 (266)
T TIGR03101 85 DVAAAYRWLIE-QGHPPVTLWGLRLGALLALDAANPLAA---KCNRLVLWQPVVSGKQ 138 (266)
T ss_pred HHHHHHHHHHh-cCCCCEEEEEECHHHHHHHHHHHhCcc---ccceEEEeccccchHH
Confidence 34444444443 456899999999999999999999887 5777889999765443
No 34
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=98.59 E-value=1.1e-07 Score=60.68 Aligned_cols=51 Identities=22% Similarity=0.291 Sum_probs=39.5
Q ss_pred ccHHHHHHH----HHHHhCCCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeeccc
Q psy5051 4 YDLPVVIDY----ILSVTGQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPI 57 (87)
Q Consensus 4 ~D~~~~i~~----v~~~~~~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~ 57 (87)
+|+.+++++ +++..+.++++++|||+||.+++.++..+|+ ++.+++++++.
T Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia~~~a~~~~~---~v~~lil~~~~ 104 (251)
T TIGR03695 50 YDFEEAAQDILATLLDQLGIEPFFLVGYSMGGRIALYYALQYPE---RVQGLILESGS 104 (251)
T ss_pred hhHHHHHHHHHHHHHHHcCCCeEEEEEeccHHHHHHHHHHhCch---heeeeEEecCC
Confidence 345555544 4456677899999999999999999999997 57777777764
No 35
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=98.59 E-value=1e-07 Score=65.20 Aligned_cols=50 Identities=20% Similarity=0.221 Sum_probs=40.4
Q ss_pred cHHHHHHHHHHHhCCCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeeccc
Q psy5051 5 DLPVVIDYILSVTGQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPI 57 (87)
Q Consensus 5 D~~~~i~~v~~~~~~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~ 57 (87)
|+.+.++.+++..+.++++++||||||.+++.++..+|+ +++++++.++.
T Consensus 80 ~~~~dl~~l~~~l~~~~~~lvG~S~GG~ia~~~a~~~p~---~v~~lvl~~~~ 129 (306)
T TIGR01249 80 DLVADIEKLREKLGIKNWLVFGGSWGSTLALAYAQTHPE---VVTGLVLRGIF 129 (306)
T ss_pred HHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHHChH---hhhhheeeccc
Confidence 455556666777888899999999999999999999998 56666777654
No 36
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=98.58 E-value=9.8e-08 Score=65.26 Aligned_cols=51 Identities=20% Similarity=0.372 Sum_probs=40.0
Q ss_pred cHHHHHHHHHHH--hCCCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeecccc
Q psy5051 5 DLPVVIDYILSV--TGQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPIA 58 (87)
Q Consensus 5 D~~~~i~~v~~~--~~~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~~ 58 (87)
++..+++.+.+. .+.++++++||||||.++..++...|+ ++..++.+.|+.
T Consensus 95 ~la~~l~~L~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~~~---~v~~iv~LDPa~ 147 (275)
T cd00707 95 ELAKFLDFLVDNTGLSLENVHLIGHSLGAHVAGFAGKRLNG---KLGRITGLDPAG 147 (275)
T ss_pred HHHHHHHHHHHhcCCChHHEEEEEecHHHHHHHHHHHHhcC---ccceeEEecCCc
Confidence 445566666655 345799999999999999999988887 677788888764
No 37
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=98.57 E-value=1.8e-07 Score=66.89 Aligned_cols=46 Identities=20% Similarity=0.296 Sum_probs=37.5
Q ss_pred HHHHHhCCCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeecccccc
Q psy5051 12 YILSVTGQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPIAFI 60 (87)
Q Consensus 12 ~v~~~~~~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~~~~ 60 (87)
..++..+.++++++||||||.+++.++.++|+ +++++++++|.+..
T Consensus 168 ~~~~~l~~~~~~lvGhS~GG~la~~~a~~~p~---~v~~lvl~~p~~~~ 213 (402)
T PLN02894 168 EWRKAKNLSNFILLGHSFGGYVAAKYALKHPE---HVQHLILVGPAGFS 213 (402)
T ss_pred HHHHHcCCCCeEEEEECHHHHHHHHHHHhCch---hhcEEEEECCcccc
Confidence 33445677899999999999999999999998 67777888876543
No 38
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=98.55 E-value=1.7e-07 Score=61.90 Aligned_cols=50 Identities=22% Similarity=0.425 Sum_probs=37.1
Q ss_pred ccHHHHHHH---HHHHhCCCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeecc
Q psy5051 4 YDLPVVIDY---ILSVTGQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAP 56 (87)
Q Consensus 4 ~D~~~~i~~---v~~~~~~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p 56 (87)
+++..+.+. +++..+.++++++||||||.+++.++..+|+ ++++++++++
T Consensus 76 ~~~~~~~~~l~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~---~v~~~v~~~~ 128 (278)
T TIGR03056 76 FTLPSMAEDLSALCAAEGLSPDGVIGHSAGAAIALRLALDGPV---TPRMVVGINA 128 (278)
T ss_pred CCHHHHHHHHHHHHHHcCCCCceEEEECccHHHHHHHHHhCCc---ccceEEEEcC
Confidence 344444444 4455677899999999999999999999987 4556666665
No 39
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=98.54 E-value=2.7e-07 Score=65.25 Aligned_cols=52 Identities=17% Similarity=0.258 Sum_probs=40.6
Q ss_pred ccHHHHH---HHHHHHhCCCc-eeEEEEChHHHHHHHHHHhCCchhhhhhheeeecccc
Q psy5051 4 YDLPVVI---DYILSVTGQPK-LSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPIA 58 (87)
Q Consensus 4 ~D~~~~i---~~v~~~~~~~~-~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~~ 58 (87)
|++..+. ..+++.++.++ ++++||||||.+++.++..+|+ ++++++++++..
T Consensus 127 ~~~~~~~~~~~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~---~v~~lvl~~~~~ 182 (379)
T PRK00175 127 ITIRDWVRAQARLLDALGITRLAAVVGGSMGGMQALEWAIDYPD---RVRSALVIASSA 182 (379)
T ss_pred CCHHHHHHHHHHHHHHhCCCCceEEEEECHHHHHHHHHHHhChH---hhhEEEEECCCc
Confidence 3444444 45567788888 4899999999999999999998 677778887644
No 40
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=98.54 E-value=2.1e-07 Score=62.10 Aligned_cols=52 Identities=25% Similarity=0.310 Sum_probs=38.1
Q ss_pred HHHHHHHHHHh-----CCCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeecccc
Q psy5051 7 PVVIDYILSVT-----GQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPIA 58 (87)
Q Consensus 7 ~~~i~~v~~~~-----~~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~~ 58 (87)
...++++++.. +.+++.+|||||||.++..++...+...++++.++.++.+.
T Consensus 67 ~~~i~~i~~~~~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh 123 (225)
T PF07819_consen 67 AEAIKYILELYKSNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPH 123 (225)
T ss_pred HHHHHHHHHhhhhccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCC
Confidence 34555555544 67899999999999999888876554445788888887543
No 41
>PRK10985 putative hydrolase; Provisional
Probab=98.53 E-value=2e-07 Score=64.57 Aligned_cols=54 Identities=15% Similarity=0.222 Sum_probs=42.6
Q ss_pred ccHHHHHHHHHHHhCCCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeecccc
Q psy5051 4 YDLPVVIDYILSVTGQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPIA 58 (87)
Q Consensus 4 ~D~~~~i~~v~~~~~~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~~ 58 (87)
.|+.+.++++.++.+..+++++||||||.++..+++.+++. ..+.+++++++..
T Consensus 115 ~D~~~~i~~l~~~~~~~~~~~vG~S~GG~i~~~~~~~~~~~-~~~~~~v~i~~p~ 168 (324)
T PRK10985 115 EDARFFLRWLQREFGHVPTAAVGYSLGGNMLACLLAKEGDD-LPLDAAVIVSAPL 168 (324)
T ss_pred HHHHHHHHHHHHhCCCCCEEEEEecchHHHHHHHHHhhCCC-CCccEEEEEcCCC
Confidence 57777888888888888999999999999988888877652 1367777777653
No 42
>PLN02578 hydrolase
Probab=98.53 E-value=2.5e-07 Score=64.75 Aligned_cols=52 Identities=17% Similarity=0.158 Sum_probs=38.7
Q ss_pred ccHHHHHHHH---HHHhCCCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeecccc
Q psy5051 4 YDLPVVIDYI---LSVTGQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPIA 58 (87)
Q Consensus 4 ~D~~~~i~~v---~~~~~~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~~ 58 (87)
|+...+.+++ ++....++++++|||+||.+++.++.++|+ ++++++++++..
T Consensus 133 ~~~~~~a~~l~~~i~~~~~~~~~lvG~S~Gg~ia~~~A~~~p~---~v~~lvLv~~~~ 187 (354)
T PLN02578 133 YDAMVWRDQVADFVKEVVKEPAVLVGNSLGGFTALSTAVGYPE---LVAGVALLNSAG 187 (354)
T ss_pred cCHHHHHHHHHHHHHHhccCCeEEEEECHHHHHHHHHHHhChH---hcceEEEECCCc
Confidence 4444433333 344567899999999999999999999998 577777877643
No 43
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=98.52 E-value=3.3e-07 Score=65.62 Aligned_cols=56 Identities=21% Similarity=0.258 Sum_probs=41.8
Q ss_pred cHHHHHHHHHHHhCCCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeeccccccc
Q psy5051 5 DLPVVIDYILSVTGQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPIAFIN 61 (87)
Q Consensus 5 D~~~~i~~v~~~~~~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~~~~~ 61 (87)
|+.+.++++....+..+++++||||||.+++.++ .+|+..+++.++++.+|.....
T Consensus 193 Dl~~~l~~l~~~~~~~~i~lvGhSmGG~ial~~a-~~p~~~~~v~glVL~sP~l~~~ 248 (395)
T PLN02652 193 DTEAFLEKIRSENPGVPCFLFGHSTGGAVVLKAA-SYPSIEDKLEGIVLTSPALRVK 248 (395)
T ss_pred HHHHHHHHHHHhCCCCCEEEEEECHHHHHHHHHH-hccCcccccceEEEECcccccc
Confidence 4555666665555556899999999999998765 5776556788999999976444
No 44
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=98.51 E-value=2.1e-07 Score=64.82 Aligned_cols=37 Identities=22% Similarity=0.244 Sum_probs=32.4
Q ss_pred CceeEEEEChHHHHHHHHHHhCCchhhhhhheeeeccccc
Q psy5051 20 PKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPIAF 59 (87)
Q Consensus 20 ~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~~~ 59 (87)
.+++++||||||.+++.++..+|+ .+.++++++|...
T Consensus 162 ~~~~LvGhSmGG~val~~a~~~p~---~v~glVLi~p~~~ 198 (349)
T PLN02385 162 LPSFLFGQSMGGAVALKVHLKQPN---AWDGAILVAPMCK 198 (349)
T ss_pred CCEEEEEeccchHHHHHHHHhCcc---hhhheeEeccccc
Confidence 479999999999999999999998 6788889998643
No 45
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=98.50 E-value=2.6e-07 Score=67.18 Aligned_cols=52 Identities=15% Similarity=0.257 Sum_probs=39.5
Q ss_pred cHHHHHHHHHHHh--CCCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeeccccc
Q psy5051 5 DLPVVIDYILSVT--GQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPIAF 59 (87)
Q Consensus 5 D~~~~i~~v~~~~--~~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~~~ 59 (87)
++.++++.+.+.. +.++++++||||||.++..++...|+ +|..++.+.|+.-
T Consensus 102 ~la~lI~~L~~~~gl~l~~VhLIGHSLGAhIAg~ag~~~p~---rV~rItgLDPAgP 155 (442)
T TIGR03230 102 DVAKFVNWMQEEFNYPWDNVHLLGYSLGAHVAGIAGSLTKH---KVNRITGLDPAGP 155 (442)
T ss_pred HHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHHHhCCc---ceeEEEEEcCCCC
Confidence 3455556555443 46899999999999999999988887 5777788888653
No 46
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=98.49 E-value=5.1e-07 Score=62.54 Aligned_cols=48 Identities=23% Similarity=0.430 Sum_probs=37.9
Q ss_pred HHHHHHHHhCCCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeeccccc
Q psy5051 9 VIDYILSVTGQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPIAF 59 (87)
Q Consensus 9 ~i~~v~~~~~~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~~~ 59 (87)
.+..+++..+.++++++|||+||.+++.++..+|+ ++..+++++|...
T Consensus 186 ~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~~~---~v~~lv~~~~~~~ 233 (371)
T PRK14875 186 AVLAFLDALGIERAHLVGHSMGGAVALRLAARAPQ---RVASLTLIAPAGL 233 (371)
T ss_pred HHHHHHHhcCCccEEEEeechHHHHHHHHHHhCch---heeEEEEECcCCc
Confidence 34444566777899999999999999999998887 5777788887643
No 47
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=98.47 E-value=3.3e-07 Score=64.35 Aligned_cols=52 Identities=19% Similarity=0.239 Sum_probs=38.8
Q ss_pred ccHHHHHHHH---HHHhCCCceeEEEEChHHHHHHHHHHh-CCchhhhhhheeeecccc
Q psy5051 4 YDLPVVIDYI---LSVTGQPKLSYIGHSMGTTMFWVLLSE-KPEYNDKIEVMIGMAPIA 58 (87)
Q Consensus 4 ~D~~~~i~~v---~~~~~~~~~~lvGHS~Gg~i~~~~a~~-~p~~~~~l~~~v~~~p~~ 58 (87)
+++..+.+.+ ++..+.++++++||||||.+++.+++. +|+ +++++++++|..
T Consensus 136 ~~~~~~a~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~P~---rV~~LVLi~~~~ 191 (360)
T PLN02679 136 YTMETWAELILDFLEEVVQKPTVLIGNSVGSLACVIAASESTRD---LVRGLVLLNCAG 191 (360)
T ss_pred ccHHHHHHHHHHHHHHhcCCCeEEEEECHHHHHHHHHHHhcChh---hcCEEEEECCcc
Confidence 3445544444 456678899999999999999888874 687 677778888654
No 48
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=98.45 E-value=3.6e-07 Score=62.03 Aligned_cols=51 Identities=20% Similarity=0.195 Sum_probs=37.7
Q ss_pred ccHHHHHHHHH---HHh-CCCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeeccc
Q psy5051 4 YDLPVVIDYIL---SVT-GQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPI 57 (87)
Q Consensus 4 ~D~~~~i~~v~---~~~-~~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~ 57 (87)
+++.+..+.+. +.. +.++++++||||||.++..++..+|+ ++++++++++.
T Consensus 67 ~~~~~~~~~l~~~i~~l~~~~~v~lvGhS~GG~v~~~~a~~~p~---~v~~lv~~~~~ 121 (273)
T PLN02211 67 TTFDEYNKPLIDFLSSLPENEKVILVGHSAGGLSVTQAIHRFPK---KICLAVYVAAT 121 (273)
T ss_pred CCHHHHHHHHHHHHHhcCCCCCEEEEEECchHHHHHHHHHhChh---heeEEEEeccc
Confidence 34555555544 334 34799999999999999999988887 57777887653
No 49
>PLN02511 hydrolase
Probab=98.42 E-value=5.9e-07 Score=63.92 Aligned_cols=52 Identities=21% Similarity=0.252 Sum_probs=42.4
Q ss_pred ccHHHHHHHHHHHhCCCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeecc
Q psy5051 4 YDLPVVIDYILSVTGQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAP 56 (87)
Q Consensus 4 ~D~~~~i~~v~~~~~~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p 56 (87)
.|+.++++++....+..+++++||||||.+++.++.++|+.. .+.+.+.+++
T Consensus 157 ~Dl~~~i~~l~~~~~~~~~~lvG~SlGg~i~~~yl~~~~~~~-~v~~~v~is~ 208 (388)
T PLN02511 157 GDLRQVVDHVAGRYPSANLYAAGWSLGANILVNYLGEEGENC-PLSGAVSLCN 208 (388)
T ss_pred HHHHHHHHHHHHHCCCCCEEEEEechhHHHHHHHHHhcCCCC-CceEEEEECC
Confidence 578888888888877789999999999999999999998731 2666666554
No 50
>PRK13604 luxD acyl transferase; Provisional
Probab=98.41 E-value=3.5e-07 Score=63.78 Aligned_cols=54 Identities=19% Similarity=0.360 Sum_probs=42.0
Q ss_pred CcccHHHHHHHHHHHhCCCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeeccccccc
Q psy5051 2 GIYDLPVVIDYILSVTGQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPIAFIN 61 (87)
Q Consensus 2 a~~D~~~~i~~v~~~~~~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~~~~~ 61 (87)
+.+|+.++++++++. +.+++.++||||||.++...+... .++.+++.+|...+.
T Consensus 91 g~~Dl~aaid~lk~~-~~~~I~LiG~SmGgava~~~A~~~-----~v~~lI~~sp~~~l~ 144 (307)
T PRK13604 91 GKNSLLTVVDWLNTR-GINNLGLIAASLSARIAYEVINEI-----DLSFLITAVGVVNLR 144 (307)
T ss_pred cHHHHHHHHHHHHhc-CCCceEEEEECHHHHHHHHHhcCC-----CCCEEEEcCCcccHH
Confidence 357999999999875 567899999999999986665532 366788888876643
No 51
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=98.41 E-value=7.6e-07 Score=62.10 Aligned_cols=40 Identities=25% Similarity=0.239 Sum_probs=30.6
Q ss_pred CCceeEEEEChHHHHHHHHHHhCCch---h--hhhhheeeecccc
Q psy5051 19 QPKLSYIGHSMGTTMFWVLLSEKPEY---N--DKIEVMIGMAPIA 58 (87)
Q Consensus 19 ~~~~~lvGHS~Gg~i~~~~a~~~p~~---~--~~l~~~v~~~p~~ 58 (87)
..+++++||||||.+++.++..+++. . ..++++++++|..
T Consensus 141 ~~p~~l~GhSmGg~i~~~~~~~~~~~~~~~~~~~i~g~i~~s~~~ 185 (332)
T TIGR01607 141 RLPMYIIGLSMGGNIALRLLELLGKSNENNDKLNIKGCISLSGMI 185 (332)
T ss_pred CCceeEeeccCccHHHHHHHHHhccccccccccccceEEEeccce
Confidence 45899999999999999988765532 1 1578888888753
No 52
>KOG1455|consensus
Probab=98.39 E-value=9.5e-07 Score=61.40 Aligned_cols=64 Identities=19% Similarity=0.283 Sum_probs=46.3
Q ss_pred hCCCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeeccccccccC--ChH----HHHHHHhhcCccc-cccc
Q psy5051 17 TGQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPIAFINHV--KSP----VIRFLATISDPLA-VSNR 83 (87)
Q Consensus 17 ~~~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~~~~~~~--~~~----~~~~l~~~~~~~~-~~~~ 83 (87)
....+.++.||||||++++.++..+|+ ...++++++|.....+. ..+ ++..+++++++.. +|++
T Consensus 126 ~~~lp~FL~GeSMGGAV~Ll~~~k~p~---~w~G~ilvaPmc~i~~~~kp~p~v~~~l~~l~~liP~wk~vp~~ 196 (313)
T KOG1455|consen 126 NKGLPRFLFGESMGGAVALLIALKDPN---FWDGAILVAPMCKISEDTKPHPPVISILTLLSKLIPTWKIVPTK 196 (313)
T ss_pred cCCCCeeeeecCcchHHHHHHHhhCCc---ccccceeeecccccCCccCCCcHHHHHHHHHHHhCCceeecCCc
Confidence 345689999999999999999998888 67788888886443321 222 3345667788777 6655
No 53
>PRK11071 esterase YqiA; Provisional
Probab=98.32 E-value=2.3e-06 Score=55.54 Aligned_cols=49 Identities=16% Similarity=0.137 Sum_probs=39.0
Q ss_pred cHHHHHHHHHHHhCCCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeeccccc
Q psy5051 5 DLPVVIDYILSVTGQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPIAF 59 (87)
Q Consensus 5 D~~~~i~~v~~~~~~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~~~ 59 (87)
+..+.++.+.+..+.++++++||||||.+++.++..+|. + +++++|...
T Consensus 46 ~~~~~l~~l~~~~~~~~~~lvG~S~Gg~~a~~~a~~~~~---~---~vl~~~~~~ 94 (190)
T PRK11071 46 DAAELLESLVLEHGGDPLGLVGSSLGGYYATWLSQCFML---P---AVVVNPAVR 94 (190)
T ss_pred HHHHHHHHHHHHcCCCCeEEEEECHHHHHHHHHHHHcCC---C---EEEECCCCC
Confidence 455667777777888899999999999999999999883 2 467777543
No 54
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=98.29 E-value=2e-06 Score=56.21 Aligned_cols=51 Identities=22% Similarity=0.118 Sum_probs=39.3
Q ss_pred ccHHHHHHHHHHHhCC--CceeEEEEChHHHHHHHHHHhCCchhhhhhheeeeccc
Q psy5051 4 YDLPVVIDYILSVTGQ--PKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPI 57 (87)
Q Consensus 4 ~D~~~~i~~v~~~~~~--~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~ 57 (87)
+|+..+++++.+..+. ++++++||||||.+++.++..+|+ .+.+++.++..
T Consensus 77 ~~~~~~i~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~---~~~~~~~~~g~ 129 (212)
T TIGR01840 77 ESLHQLIDAVKANYSIDPNRVYVTGLSAGGGMTAVLGCTYPD---VFAGGASNAGL 129 (212)
T ss_pred HHHHHHHHHHHHhcCcChhheEEEEECHHHHHHHHHHHhCch---hheEEEeecCC
Confidence 4566778887776543 589999999999999999999998 45555655543
No 55
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=98.26 E-value=2.3e-06 Score=58.08 Aligned_cols=52 Identities=10% Similarity=0.105 Sum_probs=40.6
Q ss_pred ccHHHHHHHHHHHh-CCCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeeccccc
Q psy5051 4 YDLPVVIDYILSVT-GQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPIAF 59 (87)
Q Consensus 4 ~D~~~~i~~v~~~~-~~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~~~ 59 (87)
.|+.+.++.+.+.. +.++++++|||+||.+++.++.. ++ +++++++++|...
T Consensus 83 ~d~~~~~~~l~~~~~g~~~i~l~G~S~Gg~~a~~~a~~-~~---~v~~lil~~p~~~ 135 (274)
T TIGR03100 83 ADIAAAIDAFREAAPHLRRIVAWGLCDAASAALLYAPA-DL---RVAGLVLLNPWVR 135 (274)
T ss_pred HHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHhhh-CC---CccEEEEECCccC
Confidence 46777777777654 56789999999999999988754 33 6888899998643
No 56
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=98.25 E-value=2.6e-06 Score=60.90 Aligned_cols=52 Identities=19% Similarity=0.236 Sum_probs=42.1
Q ss_pred ccHHHHHHHH---HHHhCCCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeecccc
Q psy5051 4 YDLPVVIDYI---LSVTGQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPIA 58 (87)
Q Consensus 4 ~D~~~~i~~v---~~~~~~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~~ 58 (87)
|++..+.+++ ++..+.++++++|||+||.+++.++..+|+ +++++++++|..
T Consensus 178 ys~~~~a~~l~~~i~~l~~~~~~LvG~s~GG~ia~~~a~~~P~---~v~~lILi~~~~ 232 (383)
T PLN03084 178 YTLDEYVSSLESLIDELKSDKVSLVVQGYFSPPVVKYASAHPD---KIKKLILLNPPL 232 (383)
T ss_pred CCHHHHHHHHHHHHHHhCCCCceEEEECHHHHHHHHHHHhChH---hhcEEEEECCCC
Confidence 4555555554 556778899999999999999999999998 688888998764
No 57
>PLN02442 S-formylglutathione hydrolase
Probab=98.23 E-value=2.7e-06 Score=58.19 Aligned_cols=42 Identities=29% Similarity=0.405 Sum_probs=33.7
Q ss_pred HHhCCCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeeccccc
Q psy5051 15 SVTGQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPIAF 59 (87)
Q Consensus 15 ~~~~~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~~~ 59 (87)
+..+.++++++||||||..++.++.++|+ .+++++.++|...
T Consensus 138 ~~~~~~~~~i~G~S~GG~~a~~~a~~~p~---~~~~~~~~~~~~~ 179 (283)
T PLN02442 138 DQLDTSRASIFGHSMGGHGALTIYLKNPD---KYKSVSAFAPIAN 179 (283)
T ss_pred HhcCCCceEEEEEChhHHHHHHHHHhCch---hEEEEEEECCccC
Confidence 34567889999999999999999999998 4566677777543
No 58
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.20 E-value=4.1e-06 Score=52.79 Aligned_cols=48 Identities=23% Similarity=0.436 Sum_probs=39.7
Q ss_pred HHHHHHHHHHhCCCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeeccc
Q psy5051 7 PVVIDYILSVTGQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPI 57 (87)
Q Consensus 7 ~~~i~~v~~~~~~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~ 57 (87)
.+.++.+.+..+.++++++|||+||.+++.++..+|+ ++..++++++.
T Consensus 75 ~~~~~~~~~~~~~~~~~l~G~S~Gg~~~~~~~~~~p~---~~~~~v~~~~~ 122 (282)
T COG0596 75 ADDLAALLDALGLEKVVLVGHSMGGAVALALALRHPD---RVRGLVLIGPA 122 (282)
T ss_pred HHHHHHHHHHhCCCceEEEEecccHHHHHHHHHhcch---hhheeeEecCC
Confidence 3455666777888889999999999999999999998 67777888754
No 59
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=98.16 E-value=7.2e-06 Score=49.54 Aligned_cols=48 Identities=23% Similarity=0.432 Sum_probs=37.2
Q ss_pred cHHHHHHHHHH-HhCCCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeecc
Q psy5051 5 DLPVVIDYILS-VTGQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAP 56 (87)
Q Consensus 5 D~~~~i~~v~~-~~~~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p 56 (87)
+...+++.+.+ ..+.+++.++|||+||.++..++..+| +++++++++|
T Consensus 45 ~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~----~v~~~v~~~~ 93 (145)
T PF12695_consen 45 AVERVLADIRAGYPDPDRIILIGHSMGGAIAANLAARNP----RVKAVVLLSP 93 (145)
T ss_dssp HHHHHHHHHHHHHCTCCEEEEEEETHHHHHHHHHHHHST----TESEEEEESE
T ss_pred HHHHHHHHHHhhcCCCCcEEEEEEccCcHHHHHHhhhcc----ceeEEEEecC
Confidence 34455555533 346789999999999999999998773 6888888888
No 60
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=98.14 E-value=4.9e-06 Score=51.88 Aligned_cols=47 Identities=15% Similarity=0.101 Sum_probs=33.2
Q ss_pred HHHhCCCceeEEEEChHHHHHHHHHHhCCch-hhhhhheeeecccccc
Q psy5051 14 LSVTGQPKLSYIGHSMGTTMFWVLLSEKPEY-NDKIEVMIGMAPIAFI 60 (87)
Q Consensus 14 ~~~~~~~~~~lvGHS~Gg~i~~~~a~~~p~~-~~~l~~~v~~~p~~~~ 60 (87)
+...+..+++++|||+||.++...+...++. ..++..++.++|+...
T Consensus 22 ~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~~~ 69 (153)
T cd00741 22 LAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPRVG 69 (153)
T ss_pred HHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCccc
Confidence 3334678999999999999999888765432 1245567778765543
No 61
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=98.14 E-value=4.1e-06 Score=55.99 Aligned_cols=36 Identities=36% Similarity=0.558 Sum_probs=30.3
Q ss_pred cHHHHHHHHHHHhCCCceeEEEEChHHHHHHHHHHhC
Q psy5051 5 DLPVVIDYILSVTGQPKLSYIGHSMGTTMFWVLLSEK 41 (87)
Q Consensus 5 D~~~~i~~v~~~~~~~~~~lvGHS~Gg~i~~~~a~~~ 41 (87)
++.++++.|++.++. |+.+||||||+.++..+....
T Consensus 61 ~l~~fI~~Vl~~TGa-kVDIVgHS~G~~iaR~yi~~~ 96 (219)
T PF01674_consen 61 QLRAFIDAVLAYTGA-KVDIVGHSMGGTIARYYIKGG 96 (219)
T ss_dssp HHHHHHHHHHHHHT---EEEEEETCHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhhCC-EEEEEEcCCcCHHHHHHHHHc
Confidence 578899999999999 999999999999999988643
No 62
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=98.13 E-value=4e-06 Score=62.24 Aligned_cols=54 Identities=13% Similarity=0.264 Sum_probs=40.1
Q ss_pred ccHHHHHHHHHHHhCCCceeEEEEChHHHHHH----HHHHhC-Cchhhhhhheeeecccccc
Q psy5051 4 YDLPVVIDYILSVTGQPKLSYIGHSMGTTMFW----VLLSEK-PEYNDKIEVMIGMAPIAFI 60 (87)
Q Consensus 4 ~D~~~~i~~v~~~~~~~~~~lvGHS~Gg~i~~----~~a~~~-p~~~~~l~~~v~~~p~~~~ 60 (87)
+++.+.++.+++..+.++++++||||||+++. .+++.+ |+ +++++++++....+
T Consensus 246 ~~i~~al~~v~~~~g~~kv~lvG~cmGGtl~a~ala~~aa~~~~~---rv~slvll~t~~Df 304 (532)
T TIGR01838 246 DGVIAALEVVEAITGEKQVNCVGYCIGGTLLSTALAYLAARGDDK---RIKSATFFTTLLDF 304 (532)
T ss_pred HHHHHHHHHHHHhcCCCCeEEEEECcCcHHHHHHHHHHHHhCCCC---ccceEEEEecCcCC
Confidence 34677788888889999999999999999853 244554 55 57777887754433
No 63
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=98.12 E-value=6.6e-06 Score=56.09 Aligned_cols=51 Identities=24% Similarity=0.356 Sum_probs=36.1
Q ss_pred HHHHHHHHHHhCCCceeEEEEChHHHHHHHHHHhCCch--hhhhhheeeec-cc
Q psy5051 7 PVVIDYILSVTGQPKLSYIGHSMGTTMFWVLLSEKPEY--NDKIEVMIGMA-PI 57 (87)
Q Consensus 7 ~~~i~~v~~~~~~~~~~lvGHS~Gg~i~~~~a~~~p~~--~~~l~~~v~~~-p~ 57 (87)
..++.++.++.+.+++.+|||||||...+.|+..+-.. .-++..++.++ |+
T Consensus 90 ~~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pf 143 (255)
T PF06028_consen 90 KKVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPF 143 (255)
T ss_dssp HHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--T
T ss_pred HHHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEecccc
Confidence 44556666778899999999999999999998876432 12567888886 44
No 64
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=98.11 E-value=5.7e-06 Score=59.16 Aligned_cols=51 Identities=24% Similarity=0.289 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHhCCCceeEEEEChHHHHHHHHHHhCCc---hhhhhhheeeeccc
Q psy5051 6 LPVVIDYILSVTGQPKLSYIGHSMGTTMFWVLLSEKPE---YNDKIEVMIGMAPI 57 (87)
Q Consensus 6 ~~~~i~~v~~~~~~~~~~lvGHS~Gg~i~~~~a~~~p~---~~~~l~~~v~~~p~ 57 (87)
+...|+...+.. .+|+.++||||||.++..+....+. ..+.|+.++.++++
T Consensus 106 lk~~ie~~~~~~-~~kv~li~HSmGgl~~~~fl~~~~~~~W~~~~i~~~i~i~~p 159 (389)
T PF02450_consen 106 LKQLIEEAYKKN-GKKVVLIAHSMGGLVARYFLQWMPQEEWKDKYIKRFISIGTP 159 (389)
T ss_pred HHHHHHHHHHhc-CCcEEEEEeCCCchHHHHHHHhccchhhHHhhhhEEEEeCCC
Confidence 445555555555 6899999999999999999988754 34578899998864
No 65
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=98.08 E-value=6.8e-06 Score=67.46 Aligned_cols=50 Identities=20% Similarity=0.284 Sum_probs=38.8
Q ss_pred cHHHHHHHH---HHHhCCCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeeccc
Q psy5051 5 DLPVVIDYI---LSVTGQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPI 57 (87)
Q Consensus 5 D~~~~i~~v---~~~~~~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~ 57 (87)
++..+.+.+ ++..+.++++++||||||.+++.++.++|+ ++++++++++.
T Consensus 1427 si~~~a~~l~~ll~~l~~~~v~LvGhSmGG~iAl~~A~~~P~---~V~~lVlis~~ 1479 (1655)
T PLN02980 1427 SVELVADLLYKLIEHITPGKVTLVGYSMGARIALYMALRFSD---KIEGAVIISGS 1479 (1655)
T ss_pred CHHHHHHHHHHHHHHhCCCCEEEEEECHHHHHHHHHHHhChH---hhCEEEEECCC
Confidence 444444444 456778899999999999999999999998 57777777653
No 66
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=98.06 E-value=1.3e-05 Score=54.38 Aligned_cols=39 Identities=26% Similarity=0.423 Sum_probs=32.3
Q ss_pred CCCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeeccccc
Q psy5051 18 GQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPIAF 59 (87)
Q Consensus 18 ~~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~~~ 59 (87)
+.+++.++||||||.+++.++.++|+ .++++++++|...
T Consensus 136 ~~~~~~~~G~S~GG~~a~~~a~~~p~---~~~~~~~~~~~~~ 174 (275)
T TIGR02821 136 DGERQGITGHSMGGHGALVIALKNPD---RFKSVSAFAPIVA 174 (275)
T ss_pred CCCceEEEEEChhHHHHHHHHHhCcc---cceEEEEECCccC
Confidence 45689999999999999999999998 4666777777643
No 67
>PLN00021 chlorophyllase
Probab=98.04 E-value=6.9e-06 Score=57.29 Aligned_cols=41 Identities=29% Similarity=0.413 Sum_probs=33.6
Q ss_pred CCceeEEEEChHHHHHHHHHHhCCchh--hhhhheeeeccccc
Q psy5051 19 QPKLSYIGHSMGTTMFWVLLSEKPEYN--DKIEVMIGMAPIAF 59 (87)
Q Consensus 19 ~~~~~lvGHS~Gg~i~~~~a~~~p~~~--~~l~~~v~~~p~~~ 59 (87)
.++++++|||+||.+++.++..+++.. .++++++.+.|...
T Consensus 125 ~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~g 167 (313)
T PLN00021 125 LSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVDG 167 (313)
T ss_pred hhheEEEEECcchHHHHHHHhhccccccccceeeEEeeccccc
Confidence 468999999999999999999888643 35778888888643
No 68
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=98.03 E-value=1.2e-05 Score=59.96 Aligned_cols=54 Identities=17% Similarity=0.193 Sum_probs=42.6
Q ss_pred cHHHHHHHHHHHhCCCceeEEEEChHHHHHHH----HHHhCCchhhhhhheeeecccccc
Q psy5051 5 DLPVVIDYILSVTGQPKLSYIGHSMGTTMFWV----LLSEKPEYNDKIEVMIGMAPIAFI 60 (87)
Q Consensus 5 D~~~~i~~v~~~~~~~~~~lvGHS~Gg~i~~~----~a~~~p~~~~~l~~~v~~~p~~~~ 60 (87)
.+.+.++.+++..+.++++++|||+||+++.+ +++.+++. +|+++++++....+
T Consensus 273 ~i~~Ald~V~~~tG~~~vnl~GyC~GGtl~a~~~a~~aA~~~~~--~V~sltllatplDf 330 (560)
T TIGR01839 273 ALKEAVDAVRAITGSRDLNLLGACAGGLTCAALVGHLQALGQLR--KVNSLTYLVSLLDS 330 (560)
T ss_pred HHHHHHHHHHHhcCCCCeeEEEECcchHHHHHHHHHHHhcCCCC--ceeeEEeeeccccc
Confidence 46677888888899999999999999999987 78888752 57777777654333
No 69
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=98.01 E-value=9.3e-06 Score=52.76 Aligned_cols=53 Identities=17% Similarity=0.392 Sum_probs=39.9
Q ss_pred ccHHHHHHHHHHHh--CCCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeeccccc
Q psy5051 4 YDLPVVIDYILSVT--GQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPIAF 59 (87)
Q Consensus 4 ~D~~~~i~~v~~~~--~~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~~~ 59 (87)
.|+.+.++++.+.. +.+++.++|||+||.+++..+..+|+ ..++++..+|...
T Consensus 46 ~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~~~~~~---~f~a~v~~~g~~d 100 (213)
T PF00326_consen 46 DDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAATQHPD---RFKAAVAGAGVSD 100 (213)
T ss_dssp HHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHHHHTCC---GSSEEEEESE-SS
T ss_pred hhHHHHHHHHhccccccceeEEEEcccccccccchhhcccce---eeeeeeccceecc
Confidence 46666777776654 34799999999999999999988998 4566677666443
No 70
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=97.99 E-value=1.4e-05 Score=57.54 Aligned_cols=48 Identities=15% Similarity=0.372 Sum_probs=36.8
Q ss_pred HHHHHHHHHh--CCCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeecccc
Q psy5051 8 VVIDYILSVT--GQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPIA 58 (87)
Q Consensus 8 ~~i~~v~~~~--~~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~~ 58 (87)
++++++.+.. +.+++.++|||+||.+++.+++.+|+ +++++++++|..
T Consensus 251 avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~---ri~a~V~~~~~~ 300 (414)
T PRK05077 251 AVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPP---RLKAVACLGPVV 300 (414)
T ss_pred HHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCc---CceEEEEECCcc
Confidence 3445544432 45789999999999999999988887 677888888754
No 71
>KOG4178|consensus
Probab=97.99 E-value=1.9e-05 Score=55.35 Aligned_cols=44 Identities=25% Similarity=0.420 Sum_probs=36.2
Q ss_pred HHHHHHHHhCCCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeec
Q psy5051 9 VIDYILSVTGQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMA 55 (87)
Q Consensus 9 ~i~~v~~~~~~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~ 55 (87)
.+..+++.++.++++++||+||+.++..++..+|+ ++.+++.++
T Consensus 102 di~~lld~Lg~~k~~lvgHDwGaivaw~la~~~Pe---rv~~lv~~n 145 (322)
T KOG4178|consen 102 DIVALLDHLGLKKAFLVGHDWGAIVAWRLALFYPE---RVDGLVTLN 145 (322)
T ss_pred HHHHHHHHhccceeEEEeccchhHHHHHHHHhChh---hcceEEEec
Confidence 33445678899999999999999999999999999 456666665
No 72
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=97.98 E-value=1.5e-05 Score=52.96 Aligned_cols=53 Identities=23% Similarity=0.355 Sum_probs=40.2
Q ss_pred CcccHHHHHHHHHHHhC-CCceeEEEEChHHHHHHHHHHhC----Cchhhhhhheeeec
Q psy5051 2 GIYDLPVVIDYILSVTG-QPKLSYIGHSMGTTMFWVLLSEK----PEYNDKIEVMIGMA 55 (87)
Q Consensus 2 a~~D~~~~i~~v~~~~~-~~~~~lvGHS~Gg~i~~~~a~~~----p~~~~~l~~~v~~~ 55 (87)
|..|+.+..++-+++.+ .++++|+|||||+.+...++.++ | ..+++.+..+++
T Consensus 76 ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~~~~~p-l~~rLVAAYliG 133 (207)
T PF11288_consen 76 AYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEEIAGDP-LRKRLVAAYLIG 133 (207)
T ss_pred hHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHHhcCch-HHhhhheeeecC
Confidence 45688888877777664 56999999999999999888664 4 556676666665
No 73
>KOG1552|consensus
Probab=97.96 E-value=1.3e-05 Score=54.66 Aligned_cols=51 Identities=22% Similarity=0.359 Sum_probs=45.1
Q ss_pred cccHHHHHHHHHHHhC-CCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeecccc
Q psy5051 3 IYDLPVVIDYILSVTG-QPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPIA 58 (87)
Q Consensus 3 ~~D~~~~i~~v~~~~~-~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~~ 58 (87)
.+|+.+..+++++..| .+++.+.|||+|+.....++++.| +.++|+.+|..
T Consensus 112 y~Di~avye~Lr~~~g~~~~Iil~G~SiGt~~tv~Lasr~~-----~~alVL~SPf~ 163 (258)
T KOG1552|consen 112 YADIKAVYEWLRNRYGSPERIILYGQSIGTVPTVDLASRYP-----LAAVVLHSPFT 163 (258)
T ss_pred hhhHHHHHHHHHhhcCCCceEEEEEecCCchhhhhHhhcCC-----cceEEEeccch
Confidence 4699999999999994 789999999999999999999886 67788988864
No 74
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=97.95 E-value=2.5e-05 Score=52.41 Aligned_cols=56 Identities=20% Similarity=0.302 Sum_probs=40.2
Q ss_pred cHHHHHHHHHHHhCCCceeEEEEChHHHHHHHHHHhC------Cchhhhhhheeeecccccc
Q psy5051 5 DLPVVIDYILSVTGQPKLSYIGHSMGTTMFWVLLSEK------PEYNDKIEVMIGMAPIAFI 60 (87)
Q Consensus 5 D~~~~i~~v~~~~~~~~~~lvGHS~Gg~i~~~~a~~~------p~~~~~l~~~v~~~p~~~~ 60 (87)
++...++.+.+..+.+++++++||||+.+.+.....- |+...++..+++.+|-...
T Consensus 78 ~l~~~L~~L~~~~~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~ 139 (233)
T PF05990_consen 78 ALARFLRDLARAPGIKRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDN 139 (233)
T ss_pred HHHHHHHHHHhccCCceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCH
Confidence 4555666666666889999999999999987765441 2333477788899986544
No 75
>PRK10566 esterase; Provisional
Probab=97.94 E-value=1.3e-05 Score=52.85 Aligned_cols=39 Identities=21% Similarity=0.235 Sum_probs=29.3
Q ss_pred cHHHHHHHHHHH--hCCCceeEEEEChHHHHHHHHHHhCCc
Q psy5051 5 DLPVVIDYILSV--TGQPKLSYIGHSMGTTMFWVLLSEKPE 43 (87)
Q Consensus 5 D~~~~i~~v~~~--~~~~~~~lvGHS~Gg~i~~~~a~~~p~ 43 (87)
|+.+.++++.+. .+.+++.++|||+||.+++.+++.+|+
T Consensus 90 ~~~~~~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~~~ 130 (249)
T PRK10566 90 EFPTLRAAIREEGWLLDDRLAVGGASMGGMTALGIMARHPW 130 (249)
T ss_pred HHHHHHHHHHhcCCcCccceeEEeecccHHHHHHHHHhCCC
Confidence 344445555544 345789999999999999999988886
No 76
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=97.89 E-value=3.1e-05 Score=47.16 Aligned_cols=33 Identities=12% Similarity=0.203 Sum_probs=25.0
Q ss_pred HHHHHHHHHhCCCceeEEEEChHHHHHHHHHHh
Q psy5051 8 VVIDYILSVTGQPKLSYIGHSMGTTMFWVLLSE 40 (87)
Q Consensus 8 ~~i~~v~~~~~~~~~~lvGHS~Gg~i~~~~a~~ 40 (87)
..++.+.+..+..++.+.|||+||.++..++..
T Consensus 52 ~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~ 84 (140)
T PF01764_consen 52 DALKELVEKYPDYSIVITGHSLGGALASLAAAD 84 (140)
T ss_dssp HHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHhcccCccchhhccchHHHHHHHHHHh
Confidence 344444555566789999999999998887765
No 77
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=97.83 E-value=4.2e-05 Score=49.18 Aligned_cols=53 Identities=19% Similarity=0.220 Sum_probs=36.5
Q ss_pred cHHHHHHHHHHHhC--CCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeeccccc
Q psy5051 5 DLPVVIDYILSVTG--QPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPIAF 59 (87)
Q Consensus 5 D~~~~i~~v~~~~~--~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~~~ 59 (87)
|+.+.++.+.+... .+++++||||+|+..++.+++... ..++.++++++|+..
T Consensus 38 ~~~~W~~~l~~~i~~~~~~~ilVaHSLGc~~~l~~l~~~~--~~~v~g~lLVAp~~~ 92 (171)
T PF06821_consen 38 DLDEWVQALDQAIDAIDEPTILVAHSLGCLTALRWLAEQS--QKKVAGALLVAPFDP 92 (171)
T ss_dssp -HHHHHHHHHHCCHC-TTTEEEEEETHHHHHHHHHHHHTC--CSSEEEEEEES--SC
T ss_pred CHHHHHHHHHHHHhhcCCCeEEEEeCHHHHHHHHHHhhcc--cccccEEEEEcCCCc
Confidence 44555555555432 356999999999999999995322 348999999999754
No 78
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=97.81 E-value=6.4e-05 Score=51.29 Aligned_cols=56 Identities=23% Similarity=0.376 Sum_probs=42.8
Q ss_pred cccHHHHHHHHHH-------Hh--CCCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeecccc
Q psy5051 3 IYDLPVVIDYILS-------VT--GQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPIA 58 (87)
Q Consensus 3 ~~D~~~~i~~v~~-------~~--~~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~~ 58 (87)
.+++...+++..+ .. ...+++++|||.|+.+++..+.+.++...+|+.++++-|..
T Consensus 58 ~~sL~~QI~hk~~~i~~~~~~~~~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi 122 (266)
T PF10230_consen 58 LFSLQDQIEHKIDFIKELIPQKNKPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTI 122 (266)
T ss_pred ccCHHHHHHHHHHHHHHHhhhhcCCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCcc
Confidence 4567776666433 11 45789999999999999999999884445788888998864
No 79
>PRK11460 putative hydrolase; Provisional
Probab=97.80 E-value=6.7e-05 Score=49.98 Aligned_cols=34 Identities=21% Similarity=0.307 Sum_probs=26.3
Q ss_pred CCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeec
Q psy5051 19 QPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMA 55 (87)
Q Consensus 19 ~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~ 55 (87)
.++++++||||||.+++.++..+|+. +..++.++
T Consensus 102 ~~~i~l~GfS~Gg~~al~~a~~~~~~---~~~vv~~s 135 (232)
T PRK11460 102 ASATALIGFSQGAIMALEAVKAEPGL---AGRVIAFS 135 (232)
T ss_pred hhhEEEEEECHHHHHHHHHHHhCCCc---ceEEEEec
Confidence 35899999999999999999888873 33344444
No 80
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=97.79 E-value=4.7e-05 Score=54.22 Aligned_cols=39 Identities=23% Similarity=0.264 Sum_probs=33.6
Q ss_pred HHHHHHhCCCcee-EEEEChHHHHHHHHHHhCCchhhhhh
Q psy5051 11 DYILSVTGQPKLS-YIGHSMGTTMFWVLLSEKPEYNDKIE 49 (87)
Q Consensus 11 ~~v~~~~~~~~~~-lvGHS~Gg~i~~~~a~~~p~~~~~l~ 49 (87)
..+++++|.+++. +||-||||+.++.++..+||+++++.
T Consensus 137 ~~ll~~LGI~~l~avvGgSmGGMqaleWa~~yPd~V~~~i 176 (368)
T COG2021 137 RLLLDALGIKKLAAVVGGSMGGMQALEWAIRYPDRVRRAI 176 (368)
T ss_pred HHHHHhcCcceEeeeeccChHHHHHHHHHHhChHHHhhhh
Confidence 4467889999988 89999999999999999999766553
No 81
>KOG2382|consensus
Probab=97.79 E-value=3.6e-05 Score=53.93 Aligned_cols=39 Identities=21% Similarity=0.341 Sum_probs=29.9
Q ss_pred CCCceeEEEEChHH-HHHHHHHHhCCchhhhhhheeeeccc
Q psy5051 18 GQPKLSYIGHSMGT-TMFWVLLSEKPEYNDKIEVMIGMAPI 57 (87)
Q Consensus 18 ~~~~~~lvGHS~Gg-~i~~~~a~~~p~~~~~l~~~v~~~p~ 57 (87)
...++.++|||||| .++++.+..+|+..+++. ++-++|.
T Consensus 121 ~~~~~~l~GHsmGG~~~~m~~t~~~p~~~~rli-v~D~sP~ 160 (315)
T KOG2382|consen 121 RLDPVVLLGHSMGGVKVAMAETLKKPDLIERLI-VEDISPG 160 (315)
T ss_pred ccCCceecccCcchHHHHHHHHHhcCcccceeE-EEecCCc
Confidence 45789999999999 888888899998755543 3345664
No 82
>PRK07868 acyl-CoA synthetase; Validated
Probab=97.77 E-value=5e-05 Score=59.73 Aligned_cols=37 Identities=11% Similarity=0.214 Sum_probs=28.8
Q ss_pred CCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeeccc
Q psy5051 19 QPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPI 57 (87)
Q Consensus 19 ~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~ 57 (87)
.++++++||||||++++.+++.+++ +++++++++++.
T Consensus 140 ~~~v~lvG~s~GG~~a~~~aa~~~~--~~v~~lvl~~~~ 176 (994)
T PRK07868 140 GRDVHLVGYSQGGMFCYQAAAYRRS--KDIASIVTFGSP 176 (994)
T ss_pred CCceEEEEEChhHHHHHHHHHhcCC--CccceEEEEecc
Confidence 4689999999999999999886543 257777776544
No 83
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=97.73 E-value=8.9e-05 Score=49.67 Aligned_cols=49 Identities=18% Similarity=0.180 Sum_probs=34.8
Q ss_pred HHHHHhCCCceeEEEEChHHHHHHHHHHhCCc-hhhhhhheeeeccccccc
Q psy5051 12 YILSVTGQPKLSYIGHSMGTTMFWVLLSEKPE-YNDKIEVMIGMAPIAFIN 61 (87)
Q Consensus 12 ~v~~~~~~~~~~lvGHS~Gg~i~~~~a~~~p~-~~~~l~~~v~~~p~~~~~ 61 (87)
.+.+..+ .++++.|||.||.+|...++..++ ..++|..++.+.+++...
T Consensus 77 ~~~~~~~-~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPGf~~ 126 (224)
T PF11187_consen 77 KIAKKYP-GKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPGFSE 126 (224)
T ss_pred HHHHhCC-CCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCCCCh
Confidence 3344444 359999999999999998887543 445788888886655443
No 84
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=97.72 E-value=6.7e-05 Score=48.88 Aligned_cols=51 Identities=12% Similarity=0.175 Sum_probs=34.2
Q ss_pred cHHHHHHH----HHHHhCCCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeec
Q psy5051 5 DLPVVIDY----ILSVTGQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMA 55 (87)
Q Consensus 5 D~~~~i~~----v~~~~~~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~ 55 (87)
++..+++. +++..+..++.++|||+||.+++..|..-.+.-.++..++++.
T Consensus 47 si~~la~~y~~~I~~~~~~gp~~L~G~S~Gg~lA~E~A~~Le~~G~~v~~l~liD 101 (229)
T PF00975_consen 47 SIEELASRYAEAIRARQPEGPYVLAGWSFGGILAFEMARQLEEAGEEVSRLILID 101 (229)
T ss_dssp SHHHHHHHHHHHHHHHTSSSSEEEEEETHHHHHHHHHHHHHHHTT-SESEEEEES
T ss_pred CHHHHHHHHHHHhhhhCCCCCeeehccCccHHHHHHHHHHHHHhhhccCceEEec
Confidence 45555544 4444555599999999999999998865333223466677776
No 85
>KOG2564|consensus
Probab=97.70 E-value=3.8e-05 Score=53.45 Aligned_cols=35 Identities=20% Similarity=0.331 Sum_probs=24.8
Q ss_pred CCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeec
Q psy5051 19 QPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMA 55 (87)
Q Consensus 19 ~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~ 55 (87)
..++.+|||||||.++...+... ...++.+++++.
T Consensus 145 ~~~iilVGHSmGGaIav~~a~~k--~lpsl~Gl~viD 179 (343)
T KOG2564|consen 145 PPQIILVGHSMGGAIAVHTAASK--TLPSLAGLVVID 179 (343)
T ss_pred CCceEEEeccccchhhhhhhhhh--hchhhhceEEEE
Confidence 35799999999999997666432 233466666654
No 86
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=97.68 E-value=0.00013 Score=51.37 Aligned_cols=54 Identities=17% Similarity=0.272 Sum_probs=34.2
Q ss_pred HHHHHHHHHH--hCCCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeeccccccc
Q psy5051 7 PVVIDYILSV--TGQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPIAFIN 61 (87)
Q Consensus 7 ~~~i~~v~~~--~~~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~~~~~ 61 (87)
..+++.+.+. ...+++++||||+|+.++-........ ..+|..+..+.|+.-..
T Consensus 135 a~~l~~L~~~~g~~~~~ihlIGhSLGAHvaG~aG~~~~~-~~ki~rItgLDPAgP~F 190 (331)
T PF00151_consen 135 AKFLSFLINNFGVPPENIHLIGHSLGAHVAGFAGKYLKG-GGKIGRITGLDPAGPLF 190 (331)
T ss_dssp HHHHHHHHHHH---GGGEEEEEETCHHHHHHHHHHHTTT----SSEEEEES-B-TTT
T ss_pred HHHHHHHHhhcCCChhHEEEEeeccchhhhhhhhhhccC-cceeeEEEecCcccccc
Confidence 3445555433 346899999999999999877766554 44677778888876433
No 87
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.67 E-value=5.2e-05 Score=50.09 Aligned_cols=31 Identities=23% Similarity=0.282 Sum_probs=23.6
Q ss_pred HHHHHHHhCCCceeEEEEChHHHHHHHHHHh
Q psy5051 10 IDYILSVTGQPKLSYIGHSMGTTMFWVLLSE 40 (87)
Q Consensus 10 i~~v~~~~~~~~~~lvGHS~Gg~i~~~~a~~ 40 (87)
++..++..+..++.+.|||+||.++..++..
T Consensus 118 ~~~~~~~~p~~~i~vtGHSLGGaiA~l~a~~ 148 (229)
T cd00519 118 LKSALKQYPDYKIIVTGHSLGGALASLLALD 148 (229)
T ss_pred HHHHHhhCCCceEEEEccCHHHHHHHHHHHH
Confidence 3334444566789999999999999887765
No 88
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=97.67 E-value=7.6e-05 Score=49.37 Aligned_cols=46 Identities=24% Similarity=0.300 Sum_probs=33.6
Q ss_pred HHHHHHHHhCCC--ceeEEEEChHHHHHHHHHHhCCchhhhhhheeeeccc
Q psy5051 9 VIDYILSVTGQP--KLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPI 57 (87)
Q Consensus 9 ~i~~v~~~~~~~--~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~ 57 (87)
++.++.+..+.. +..+.||||||..++.++.++|+ ....++.++|.
T Consensus 102 l~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd---~F~~~~~~S~~ 149 (251)
T PF00756_consen 102 LIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPD---LFGAVIAFSGA 149 (251)
T ss_dssp HHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTT---TESEEEEESEE
T ss_pred chhHHHHhcccccceeEEeccCCCcHHHHHHHHhCcc---ccccccccCcc
Confidence 334444454432 27999999999999999999999 45556777765
No 89
>PRK05855 short chain dehydrogenase; Validated
Probab=97.67 E-value=0.00011 Score=53.53 Aligned_cols=51 Identities=16% Similarity=0.403 Sum_probs=33.1
Q ss_pred ccHHHHHHHH---HHHhCCCc-eeEEEEChHHHHHHHHHHhCCchhhhhhheeeec
Q psy5051 4 YDLPVVIDYI---LSVTGQPK-LSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMA 55 (87)
Q Consensus 4 ~D~~~~i~~v---~~~~~~~~-~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~ 55 (87)
+++..+.+++ ++..+.++ ++++||||||.+++.++.. ++..+++..++.++
T Consensus 74 ~~~~~~a~dl~~~i~~l~~~~~~~lvGhS~Gg~~a~~~a~~-~~~~~~v~~~~~~~ 128 (582)
T PRK05855 74 YTLARLADDFAAVIDAVSPDRPVHLLAHDWGSIQGWEAVTR-PRAAGRIASFTSVS 128 (582)
T ss_pred cCHHHHHHHHHHHHHHhCCCCcEEEEecChHHHHHHHHHhC-ccchhhhhhheecc
Confidence 3455555554 34455544 9999999999999887765 55455555444443
No 90
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=97.65 E-value=2.8e-05 Score=50.18 Aligned_cols=57 Identities=18% Similarity=0.218 Sum_probs=43.4
Q ss_pred ccHHHHHHHHHHH-----hCCCceeEEEEChHHHHHHHHHHhCCch-hhhhhheeeecccccc
Q psy5051 4 YDLPVVIDYILSV-----TGQPKLSYIGHSMGTTMFWVLLSEKPEY-NDKIEVMIGMAPIAFI 60 (87)
Q Consensus 4 ~D~~~~i~~v~~~-----~~~~~~~lvGHS~Gg~i~~~~a~~~p~~-~~~l~~~v~~~p~~~~ 60 (87)
+|+.+.++++.+. .+.++++++|+|.||.+++.++....+. ..+++++++++|...+
T Consensus 50 ~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 50 EDVKAAYRWLLKNADKLGIDPERIVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWTDL 112 (211)
T ss_dssp HHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSST
T ss_pred cccccceeeeccccccccccccceEEeecccccchhhhhhhhhhhhcccchhhhhcccccccc
Confidence 4677777777776 5567999999999999999988764432 2357888999997544
No 91
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=97.63 E-value=0.00011 Score=47.54 Aligned_cols=55 Identities=20% Similarity=0.211 Sum_probs=40.9
Q ss_pred cHHHHHHHHHHHhCCCceeEEEEChHHHHHHHHHHh---CCchhhhhhheeeeccccc
Q psy5051 5 DLPVVIDYILSVTGQPKLSYIGHSMGTTMFWVLLSE---KPEYNDKIEVMIGMAPIAF 59 (87)
Q Consensus 5 D~~~~i~~v~~~~~~~~~~lvGHS~Gg~i~~~~a~~---~p~~~~~l~~~v~~~p~~~ 59 (87)
++...++...+..+..++.++|+|+|+.++...+.. .+...++|.++++++-...
T Consensus 66 ~~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGdP~~ 123 (179)
T PF01083_consen 66 NLVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGDPRR 123 (179)
T ss_dssp HHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-TTT
T ss_pred HHHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEEecCCcc
Confidence 445556666666778899999999999999998877 2345578888888874443
No 92
>PLN00413 triacylglycerol lipase
Probab=97.60 E-value=9.1e-05 Score=54.40 Aligned_cols=36 Identities=19% Similarity=0.342 Sum_probs=28.6
Q ss_pred ccHHHHHHHHHHHhCCCceeEEEEChHHHHHHHHHH
Q psy5051 4 YDLPVVIDYILSVTGQPKLSYIGHSMGTTMFWVLLS 39 (87)
Q Consensus 4 ~D~~~~i~~v~~~~~~~~~~lvGHS~Gg~i~~~~a~ 39 (87)
|++...++.+++..+..++++.|||+||+++..+++
T Consensus 268 y~i~~~Lk~ll~~~p~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 268 YTILRHLKEIFDQNPTSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred HHHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHH
Confidence 445566666667777779999999999999988774
No 93
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=97.58 E-value=0.0001 Score=48.42 Aligned_cols=54 Identities=19% Similarity=0.341 Sum_probs=42.6
Q ss_pred ccHHHHHHHHHHHhCCCceeEEEEChHHHHHHHHHHhCC-chhhhhhheeeeccc
Q psy5051 4 YDLPVVIDYILSVTGQPKLSYIGHSMGTTMFWVLLSEKP-EYNDKIEVMIGMAPI 57 (87)
Q Consensus 4 ~D~~~~i~~v~~~~~~~~~~lvGHS~Gg~i~~~~a~~~p-~~~~~l~~~v~~~p~ 57 (87)
.|+..++++-.++-+.+++.++|+|+|+-+.-....+-| ...++|+.+++++|.
T Consensus 52 ~Dl~~~i~~y~~~w~~~~vvLiGYSFGADvlP~~~nrLp~~~r~~v~~v~Ll~p~ 106 (192)
T PF06057_consen 52 ADLARIIRHYRARWGRKRVVLIGYSFGADVLPFIYNRLPAALRARVAQVVLLSPS 106 (192)
T ss_pred HHHHHHHHHHHHHhCCceEEEEeecCCchhHHHHHhhCCHHHHhheeEEEEeccC
Confidence 477788888888888999999999999976555444445 456789989999874
No 94
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.56 E-value=0.00016 Score=51.58 Aligned_cols=65 Identities=22% Similarity=0.243 Sum_probs=46.6
Q ss_pred cccHHHHHHHHHHHhCCCceeEEEEChHHHHHHHHH----HhCCc-hhhhhhheeeeccccccccCChHH
Q psy5051 3 IYDLPVVIDYILSVTGQPKLSYIGHSMGTTMFWVLL----SEKPE-YNDKIEVMIGMAPIAFINHVKSPV 67 (87)
Q Consensus 3 ~~D~~~~i~~v~~~~~~~~~~lvGHS~Gg~i~~~~a----~~~p~-~~~~l~~~v~~~p~~~~~~~~~~~ 67 (87)
..++..++.++.+..+.+++++++||||+.+.+... .+.++ ...+++.+++-+|-.......+++
T Consensus 174 r~aLe~~lr~La~~~~~~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD~DVF~~Q~ 243 (377)
T COG4782 174 RPALERLLRYLATDKPVKRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDIDVDVFSSQI 243 (377)
T ss_pred HHHHHHHHHHHHhCCCCceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCChhhHHHHH
Confidence 346677788888878889999999999999966543 22334 567888888888865544444443
No 95
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=97.55 E-value=0.00012 Score=51.44 Aligned_cols=52 Identities=23% Similarity=0.297 Sum_probs=40.3
Q ss_pred HHHHHHHHHHhCCCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeeccccc
Q psy5051 7 PVVIDYILSVTGQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPIAF 59 (87)
Q Consensus 7 ~~~i~~v~~~~~~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~~~ 59 (87)
-+.++.++...+.+++.++||||||....+++...++. .++..++.+++.-.
T Consensus 114 ~~~V~~~l~~~ga~~v~LigHS~GG~~~ry~~~~~~~~-~~V~~~~tl~tp~~ 165 (336)
T COG1075 114 FAYVDEVLAKTGAKKVNLIGHSMGGLDSRYYLGVLGGA-NRVASVVTLGTPHH 165 (336)
T ss_pred HHHHHHHHhhcCCCceEEEeecccchhhHHHHhhcCcc-ceEEEEEEeccCCC
Confidence 34556666778889999999999999999998888742 46777788876533
No 96
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=97.54 E-value=0.00023 Score=46.60 Aligned_cols=37 Identities=19% Similarity=0.273 Sum_probs=30.3
Q ss_pred CCCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeeccc
Q psy5051 18 GQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPI 57 (87)
Q Consensus 18 ~~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~ 57 (87)
+.+++++.|.||||.+++.++.++|+ .+.+++.++..
T Consensus 103 ~~~ri~l~GFSQGa~~al~~~l~~p~---~~~gvv~lsG~ 139 (216)
T PF02230_consen 103 DPSRIFLGGFSQGAAMALYLALRYPE---PLAGVVALSGY 139 (216)
T ss_dssp -GGGEEEEEETHHHHHHHHHHHCTSS---TSSEEEEES--
T ss_pred ChhheehhhhhhHHHHHHHHHHHcCc---CcCEEEEeecc
Confidence 45789999999999999999999998 67777777754
No 97
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=97.52 E-value=0.00017 Score=53.53 Aligned_cols=52 Identities=12% Similarity=0.105 Sum_probs=40.4
Q ss_pred cccHHHHHHHHHHHh-CCCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeeccc
Q psy5051 3 IYDLPVVIDYILSVT-GQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPI 57 (87)
Q Consensus 3 ~~D~~~~i~~v~~~~-~~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~ 57 (87)
..|+.++++++.++. ...++.++|||+||.+++.+++.+|+ .+++++..++.
T Consensus 79 ~~D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~---~l~aiv~~~~~ 131 (550)
T TIGR00976 79 AADGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPP---ALRAIAPQEGV 131 (550)
T ss_pred chHHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCC---ceeEEeecCcc
Confidence 357888888887652 23589999999999999999998887 57766765543
No 98
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.51 E-value=0.00014 Score=49.33 Aligned_cols=39 Identities=18% Similarity=0.310 Sum_probs=32.1
Q ss_pred cccHHHHHHHHHHHhC----CCceeEEEEChHHHHHHHHHHhC
Q psy5051 3 IYDLPVVIDYILSVTG----QPKLSYIGHSMGTTMFWVLLSEK 41 (87)
Q Consensus 3 ~~D~~~~i~~v~~~~~----~~~~~lvGHS~Gg~i~~~~a~~~ 41 (87)
..|++++++.+.++.. .+++.+.||||||++++..+.+.
T Consensus 53 ~~di~~Lad~la~el~~~~~d~P~alfGHSmGa~lAfEvArrl 95 (244)
T COG3208 53 LTDIESLADELANELLPPLLDAPFALFGHSMGAMLAFEVARRL 95 (244)
T ss_pred cccHHHHHHHHHHHhccccCCCCeeecccchhHHHHHHHHHHH
Confidence 3688899998877654 35899999999999999998664
No 99
>COG0400 Predicted esterase [General function prediction only]
Probab=97.49 E-value=0.00033 Score=46.47 Aligned_cols=47 Identities=17% Similarity=0.191 Sum_probs=35.9
Q ss_pred HHHHHHHHhCC--CceeEEEEChHHHHHHHHHHhCCchhhhhhheeeecccc
Q psy5051 9 VIDYILSVTGQ--PKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPIA 58 (87)
Q Consensus 9 ~i~~v~~~~~~--~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~~ 58 (87)
.++...+..+. ++++++|+|+|+.+++....++|+ .+++.++++|..
T Consensus 86 ~l~~~~~~~gi~~~~ii~~GfSqGA~ial~~~l~~~~---~~~~ail~~g~~ 134 (207)
T COG0400 86 FLEELAEEYGIDSSRIILIGFSQGANIALSLGLTLPG---LFAGAILFSGML 134 (207)
T ss_pred HHHHHHHHhCCChhheEEEecChHHHHHHHHHHhCch---hhccchhcCCcC
Confidence 33334445555 799999999999999999999998 566667777643
No 100
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=97.49 E-value=0.00013 Score=52.91 Aligned_cols=49 Identities=24% Similarity=0.375 Sum_probs=40.7
Q ss_pred cHHHHHHHHHHHhCCCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeec
Q psy5051 5 DLPVVIDYILSVTGQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMA 55 (87)
Q Consensus 5 D~~~~i~~v~~~~~~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~ 55 (87)
++...++.+++.++.++++++|||+||++...+++.++.+ +++.+.++.
T Consensus 166 ~l~~aid~v~~itg~~~InliGyCvGGtl~~~ala~~~~k--~I~S~T~lt 214 (445)
T COG3243 166 GLSEAIDTVKDITGQKDINLIGYCVGGTLLAAALALMAAK--RIKSLTLLT 214 (445)
T ss_pred HHHHHHHHHHHHhCccccceeeEecchHHHHHHHHhhhhc--ccccceeee
Confidence 4556778888999999999999999999999999988874 577666654
No 101
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=97.47 E-value=0.00019 Score=50.12 Aligned_cols=58 Identities=22% Similarity=0.334 Sum_probs=41.3
Q ss_pred ccHHHHHHHHHHHh----CCCceeEEEEChHHHHHHHHHHhCCc--hhhhhhheeeeccccccc
Q psy5051 4 YDLPVVIDYILSVT----GQPKLSYIGHSMGTTMFWVLLSEKPE--YNDKIEVMIGMAPIAFIN 61 (87)
Q Consensus 4 ~D~~~~i~~v~~~~----~~~~~~lvGHS~Gg~i~~~~a~~~p~--~~~~l~~~v~~~p~~~~~ 61 (87)
.|+.+.+++++... +.+++.++|||=|.+-.+.|+..... ....|.+.|+-+|+..-.
T Consensus 88 ~eI~~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDRE 151 (303)
T PF08538_consen 88 EEIAQLVEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDRE 151 (303)
T ss_dssp HHHHHHHHHHHHHS------S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TT
T ss_pred HHHHHHHHHHHHhhccccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChh
Confidence 57788888888873 57899999999999999999976532 235788999999976433
No 102
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=97.46 E-value=0.00028 Score=46.59 Aligned_cols=50 Identities=26% Similarity=0.438 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHhCC--CceeEEEEChHHHHHHHHHHhCCchhhhhhheeeeccccc
Q psy5051 6 LPVVIDYILSVTGQ--PKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPIAF 59 (87)
Q Consensus 6 ~~~~i~~v~~~~~~--~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~~~ 59 (87)
+...++++.++... +++.++|.|.||-+++..++.+|+ ++.+|.++|...
T Consensus 6 fe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~~----i~avVa~~ps~~ 57 (213)
T PF08840_consen 6 FEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFPQ----ISAVVAISPSSV 57 (213)
T ss_dssp HHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSSS----EEEEEEES--SB
T ss_pred HHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCCC----ccEEEEeCCcee
Confidence 45677888776543 699999999999999999999984 777788877543
No 103
>KOG2369|consensus
Probab=97.46 E-value=0.00019 Score=52.56 Aligned_cols=51 Identities=22% Similarity=0.330 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHhCCCceeEEEEChHHHHHHHHHHhCCc-----hhhhhhheeeecc
Q psy5051 6 LPVVIDYILSVTGQPKLSYIGHSMGTTMFWVLLSEKPE-----YNDKIEVMIGMAP 56 (87)
Q Consensus 6 ~~~~i~~v~~~~~~~~~~lvGHS~Gg~i~~~~a~~~p~-----~~~~l~~~v~~~p 56 (87)
+...++...+..+.+|+.+++||||+.+.++|.-..++ ..+.+++++-++.
T Consensus 168 LK~~iE~~~~~~G~kkVvlisHSMG~l~~lyFl~w~~~~~~~W~~k~I~sfvnig~ 223 (473)
T KOG2369|consen 168 LKKKIETMYKLNGGKKVVLISHSMGGLYVLYFLKWVEAEGPAWCDKYIKSFVNIGA 223 (473)
T ss_pred HHHHHHHHHHHcCCCceEEEecCCccHHHHHHHhcccccchhHHHHHHHHHHccCc
Confidence 33455555566777999999999999999999988776 2345677776653
No 104
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=97.45 E-value=0.00028 Score=53.25 Aligned_cols=52 Identities=21% Similarity=0.407 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHhCCCceeEEEEChHHHHHHHHHHhC-----------Cch-hhhhhheeeeccc
Q psy5051 6 LPVVIDYILSVTGQPKLSYIGHSMGTTMFWVLLSEK-----------PEY-NDKIEVMIGMAPI 57 (87)
Q Consensus 6 ~~~~i~~v~~~~~~~~~~lvGHS~Gg~i~~~~a~~~-----------p~~-~~~l~~~v~~~p~ 57 (87)
+...|+...+..+.+|+.++||||||.+++.|.... ++. .+.|++++.+++.
T Consensus 199 LK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp 262 (642)
T PLN02517 199 LKSNIELMVATNGGKKVVVVPHSMGVLYFLHFMKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGP 262 (642)
T ss_pred HHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHHHhccccccccCCcchHHHHHHHHHheecccc
Confidence 445566666666678999999999999999987632 222 3468888888764
No 105
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=97.44 E-value=0.00062 Score=44.27 Aligned_cols=54 Identities=13% Similarity=0.100 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHhC--CCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeecccccccc
Q psy5051 6 LPVVIDYILSVTG--QPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPIAFINH 62 (87)
Q Consensus 6 ~~~~i~~v~~~~~--~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~~~~~~ 62 (87)
+.+.++.+.++.. ..++++|+||+|+.++..++..... +|+++.+++|+.....
T Consensus 43 ~~dWi~~l~~~v~a~~~~~vlVAHSLGc~~v~h~~~~~~~---~V~GalLVAppd~~~~ 98 (181)
T COG3545 43 LDDWIARLEKEVNAAEGPVVLVAHSLGCATVAHWAEHIQR---QVAGALLVAPPDVSRP 98 (181)
T ss_pred HHHHHHHHHHHHhccCCCeEEEEecccHHHHHHHHHhhhh---ccceEEEecCCCcccc
Confidence 3445555444322 3459999999999999999876543 8999999999765543
No 106
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=97.43 E-value=0.00041 Score=46.42 Aligned_cols=40 Identities=23% Similarity=0.314 Sum_probs=33.9
Q ss_pred cHHHHHHHHHHHhCC--CceeEEEEChHHHHHHHHHHhCCch
Q psy5051 5 DLPVVIDYILSVTGQ--PKLSYIGHSMGTTMFWVLLSEKPEY 44 (87)
Q Consensus 5 D~~~~i~~v~~~~~~--~~~~lvGHS~Gg~i~~~~a~~~p~~ 44 (87)
.+.++++++.++.+. .++++.|+|.||.++..+++.+||+
T Consensus 80 ~i~~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~ 121 (220)
T PF10503_consen 80 FIAALVDYVAARYNIDPSRVYVTGLSNGGMMANVLACAYPDL 121 (220)
T ss_pred hHHHHHHhHhhhcccCCCceeeEEECHHHHHHHHHHHhCCcc
Confidence 356778888777654 5999999999999999999999994
No 107
>KOG1838|consensus
Probab=97.40 E-value=0.00033 Score=50.70 Aligned_cols=55 Identities=24% Similarity=0.236 Sum_probs=45.1
Q ss_pred cccHHHHHHHHHHHhCCCceeEEEEChHHHHHHHHHHhCCchhhhhh-heeeecccc
Q psy5051 3 IYDLPVVIDYILSVTGQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIE-VMIGMAPIA 58 (87)
Q Consensus 3 ~~D~~~~i~~v~~~~~~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~-~~v~~~p~~ 58 (87)
..|+.++++++.++.+..++..+|.||||.+...|..+-.+.. .+. ++....|..
T Consensus 181 t~Dl~~~v~~i~~~~P~a~l~avG~S~Gg~iL~nYLGE~g~~~-~l~~a~~v~~Pwd 236 (409)
T KOG1838|consen 181 TEDLREVVNHIKKRYPQAPLFAVGFSMGGNILTNYLGEEGDNT-PLIAAVAVCNPWD 236 (409)
T ss_pred HHHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHhhhccCCC-CceeEEEEeccch
Confidence 3699999999999999999999999999999999998876644 344 444556765
No 108
>PRK10162 acetyl esterase; Provisional
Probab=97.40 E-value=0.0003 Score=48.85 Aligned_cols=58 Identities=14% Similarity=0.124 Sum_probs=40.6
Q ss_pred cccHHHHHHHHHHH---hC--CCceeEEEEChHHHHHHHHHHhCCch---hhhhhheeeecccccc
Q psy5051 3 IYDLPVVIDYILSV---TG--QPKLSYIGHSMGTTMFWVLLSEKPEY---NDKIEVMIGMAPIAFI 60 (87)
Q Consensus 3 ~~D~~~~i~~v~~~---~~--~~~~~lvGHS~Gg~i~~~~a~~~p~~---~~~l~~~v~~~p~~~~ 60 (87)
.+|..+.++++.+. .+ .+++.++|||+||.+++..+....+. ..++.+++++.|....
T Consensus 132 ~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~ 197 (318)
T PRK10162 132 IEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYGL 197 (318)
T ss_pred HHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccCC
Confidence 35677777777653 44 46899999999999999888653221 1357788888886443
No 109
>PLN02162 triacylglycerol lipase
Probab=97.39 E-value=0.00023 Score=52.28 Aligned_cols=34 Identities=18% Similarity=0.242 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHhCCCceeEEEEChHHHHHHHHHH
Q psy5051 6 LPVVIDYILSVTGQPKLSYIGHSMGTTMFWVLLS 39 (87)
Q Consensus 6 ~~~~i~~v~~~~~~~~~~lvGHS~Gg~i~~~~a~ 39 (87)
+...++..++..+..++++.|||+||++|..+++
T Consensus 264 I~~~L~~lL~k~p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 264 IRQMLRDKLARNKNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHHHHHHhCCCceEEEEecChHHHHHHHHHH
Confidence 3344444455566678999999999999988754
No 110
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=97.35 E-value=0.00049 Score=44.94 Aligned_cols=46 Identities=13% Similarity=0.104 Sum_probs=32.8
Q ss_pred HHHHHHHHhCCCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeecccccc
Q psy5051 9 VIDYILSVTGQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPIAFI 60 (87)
Q Consensus 9 ~i~~v~~~~~~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~~~~ 60 (87)
.++.+.+....+.+.++|+||||..+.+++.+++- + .+++.|+...
T Consensus 48 ~l~~~i~~~~~~~~~liGSSlGG~~A~~La~~~~~-----~-avLiNPav~p 93 (187)
T PF05728_consen 48 QLEQLIEELKPENVVLIGSSLGGFYATYLAERYGL-----P-AVLINPAVRP 93 (187)
T ss_pred HHHHHHHhCCCCCeEEEEEChHHHHHHHHHHHhCC-----C-EEEEcCCCCH
Confidence 33444455555669999999999999998877642 2 2788887644
No 111
>PLN02454 triacylglycerol lipase
Probab=97.34 E-value=0.00028 Score=51.15 Aligned_cols=35 Identities=23% Similarity=0.300 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHhCCCc--eeEEEEChHHHHHHHHHHh
Q psy5051 6 LPVVIDYILSVTGQPK--LSYIGHSMGTTMFWVLLSE 40 (87)
Q Consensus 6 ~~~~i~~v~~~~~~~~--~~lvGHS~Gg~i~~~~a~~ 40 (87)
+-..++.+++..+..+ +++.|||+||+++...+..
T Consensus 212 vl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 212 LLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 3344555555555444 9999999999999888754
No 112
>PLN02934 triacylglycerol lipase
Probab=97.34 E-value=0.00024 Score=52.58 Aligned_cols=35 Identities=17% Similarity=0.304 Sum_probs=27.5
Q ss_pred cHHHHHHHHHHHhCCCceeEEEEChHHHHHHHHHH
Q psy5051 5 DLPVVIDYILSVTGQPKLSYIGHSMGTTMFWVLLS 39 (87)
Q Consensus 5 D~~~~i~~v~~~~~~~~~~lvGHS~Gg~i~~~~a~ 39 (87)
.+...++.+++..+..++++.|||+||+++..++.
T Consensus 306 ~v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 306 AVRSKLKSLLKEHKNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHHCCCCeEEEeccccHHHHHHHHHH
Confidence 34555666666777779999999999999988864
No 113
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=97.26 E-value=0.00017 Score=49.09 Aligned_cols=35 Identities=20% Similarity=0.351 Sum_probs=31.3
Q ss_pred CCcccHHHHHHHHHHHhCCCceeEEEEChHHHHHH
Q psy5051 1 MGIYDLPVVIDYILSVTGQPKLSYIGHSMGTTMFW 35 (87)
Q Consensus 1 ~a~~D~~~~i~~v~~~~~~~~~~lvGHS~Gg~i~~ 35 (87)
||..|+++.++.+.+..+..+.+.+|||+||.+.-
T Consensus 86 wA~~D~~aal~~~~~~~~~~P~y~vgHS~GGqa~g 120 (281)
T COG4757 86 WARLDFPAALAALKKALPGHPLYFVGHSFGGQALG 120 (281)
T ss_pred hhhcchHHHHHHHHhhCCCCceEEeeccccceeec
Confidence 46789999999999988888999999999998853
No 114
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=97.24 E-value=0.00044 Score=47.41 Aligned_cols=54 Identities=20% Similarity=0.353 Sum_probs=39.3
Q ss_pred cHHHHHHHHHHH----------hCCCceeEEEEChHHHHHHHHHHhCCc--hhhhhhheeeecccc
Q psy5051 5 DLPVVIDYILSV----------TGQPKLSYIGHSMGTTMFWVLLSEKPE--YNDKIEVMIGMAPIA 58 (87)
Q Consensus 5 D~~~~i~~v~~~----------~~~~~~~lvGHS~Gg~i~~~~a~~~p~--~~~~l~~~v~~~p~~ 58 (87)
+..++++++.+. .+..++.+.|||.||.+++..+..+-+ ...++++++++.|+.
T Consensus 66 ~~~~vi~Wl~~~L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 66 SAAEVIDWLAKGLESKLPLGVKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVD 131 (259)
T ss_pred HHHHHHHHHHhcchhhccccccccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEecccc
Confidence 355566665442 245689999999999999988877622 123688899999986
No 115
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=97.22 E-value=0.00047 Score=45.65 Aligned_cols=20 Identities=40% Similarity=0.649 Sum_probs=16.9
Q ss_pred CceeEEEEChHHHHHHHHHH
Q psy5051 20 PKLSYIGHSMGTTMFWVLLS 39 (87)
Q Consensus 20 ~~~~lvGHS~Gg~i~~~~a~ 39 (87)
.++++|||||||.++-.+..
T Consensus 78 ~~IsfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 78 RKISFIGHSLGGLIARYALG 97 (217)
T ss_pred ccceEEEecccHHHHHHHHH
Confidence 48999999999999876554
No 116
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=97.21 E-value=0.00048 Score=47.33 Aligned_cols=50 Identities=18% Similarity=0.294 Sum_probs=37.3
Q ss_pred HHHHHHHHHHhCCCceeEEEEChHHHHHHHHHHhCCch--hhhhhheeeecc
Q psy5051 7 PVVIDYILSVTGQPKLSYIGHSMGTTMFWVLLSEKPEY--NDKIEVMIGMAP 56 (87)
Q Consensus 7 ~~~i~~v~~~~~~~~~~lvGHS~Gg~i~~~~a~~~p~~--~~~l~~~v~~~p 56 (87)
..++.++.++.+.+++..+||||||.-...|+..+-.- ...+..++.++.
T Consensus 123 k~~msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~g 174 (288)
T COG4814 123 KKAMSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAG 174 (288)
T ss_pred HHHHHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEecc
Confidence 34566667788999999999999999999998875431 224666777753
No 117
>PLN02571 triacylglycerol lipase
Probab=97.13 E-value=0.00058 Score=49.54 Aligned_cols=32 Identities=13% Similarity=0.255 Sum_probs=22.5
Q ss_pred HHHHHHHHhCCC--ceeEEEEChHHHHHHHHHHh
Q psy5051 9 VIDYILSVTGQP--KLSYIGHSMGTTMFWVLLSE 40 (87)
Q Consensus 9 ~i~~v~~~~~~~--~~~lvGHS~Gg~i~~~~a~~ 40 (87)
.++.+.+..+.+ ++++.|||+||+++...+..
T Consensus 213 eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 213 EVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 334444444433 68999999999999887764
No 118
>KOG3101|consensus
Probab=97.10 E-value=4e-05 Score=51.59 Aligned_cols=54 Identities=20% Similarity=0.218 Sum_probs=39.6
Q ss_pred CCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeeccccccccCChHHHHHHHhhcC
Q psy5051 19 QPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPIAFINHVKSPVIRFLATISD 76 (87)
Q Consensus 19 ~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~~~~~~~~~~~~~~l~~~~~ 76 (87)
..++.+.||||||.=++..+.++|. +.+.+-.++|.....+..+. .+++...++
T Consensus 140 ~~k~~IfGHSMGGhGAl~~~Lkn~~---kykSvSAFAPI~NP~~cpWG-qKAf~gYLG 193 (283)
T KOG3101|consen 140 PLKVGIFGHSMGGHGALTIYLKNPS---KYKSVSAFAPICNPINCPWG-QKAFTGYLG 193 (283)
T ss_pred chhcceeccccCCCceEEEEEcCcc---cccceeccccccCcccCcch-HHHhhcccC
Confidence 4578999999999999988888988 56666788887766655554 355554443
No 119
>KOG3724|consensus
Probab=97.08 E-value=0.00087 Score=52.07 Aligned_cols=36 Identities=22% Similarity=0.380 Sum_probs=25.8
Q ss_pred CceeEEEEChHHHHHHHHHHhCC-chhhhhhheeeecc
Q psy5051 20 PKLSYIGHSMGTTMFWVLLSEKP-EYNDKIEVMIGMAP 56 (87)
Q Consensus 20 ~~~~lvGHS~Gg~i~~~~a~~~p-~~~~~l~~~v~~~p 56 (87)
+.+.++||||||.++...+ +.| ++...+..++.++.
T Consensus 182 ~sVILVGHSMGGiVAra~~-tlkn~~~~sVntIITlss 218 (973)
T KOG3724|consen 182 HSVILVGHSMGGIVARATL-TLKNEVQGSVNTIITLSS 218 (973)
T ss_pred ceEEEEeccchhHHHHHHH-hhhhhccchhhhhhhhcC
Confidence 4599999999999987766 455 44445666666653
No 120
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=97.06 E-value=0.0022 Score=46.56 Aligned_cols=58 Identities=17% Similarity=0.150 Sum_probs=40.6
Q ss_pred cccHHHHHHHHH---HHhCCCceeEEEEChHHHHHHHHHHhCCchh--hhhhheeeeccccccc
Q psy5051 3 IYDLPVVIDYIL---SVTGQPKLSYIGHSMGTTMFWVLLSEKPEYN--DKIEVMIGMAPIAFIN 61 (87)
Q Consensus 3 ~~D~~~~i~~v~---~~~~~~~~~lvGHS~Gg~i~~~~a~~~p~~~--~~l~~~v~~~p~~~~~ 61 (87)
..++.+.++++. +..|.+ ++++|+||||+.++++++...+.. .+++++++++......
T Consensus 149 ~f~ldDYi~~l~~~i~~~G~~-v~l~GvCqgG~~~laa~Al~a~~~~p~~~~sltlm~~PID~~ 211 (406)
T TIGR01849 149 KFDLEDYIDYLIEFIRFLGPD-IHVIAVCQPAVPVLAAVALMAENEPPAQPRSMTLMGGPIDAR 211 (406)
T ss_pred CCCHHHHHHHHHHHHHHhCCC-CcEEEEchhhHHHHHHHHHHHhcCCCCCcceEEEEecCccCC
Confidence 346666666554 456666 999999999999888888765432 2588888886544443
No 121
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=97.05 E-value=0.0017 Score=40.91 Aligned_cols=44 Identities=14% Similarity=0.209 Sum_probs=29.7
Q ss_pred HHHHhCCCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeecc
Q psy5051 13 ILSVTGQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAP 56 (87)
Q Consensus 13 v~~~~~~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p 56 (87)
+.+..+..++.++|||+||.++...+....+....+..++++.+
T Consensus 57 l~~~~~~~~~~l~g~s~Gg~~a~~~a~~l~~~~~~~~~l~~~~~ 100 (212)
T smart00824 57 VLRAAGGRPFVLVGHSSGGLLAHAVAARLEARGIPPAAVVLLDT 100 (212)
T ss_pred HHHhcCCCCeEEEEECHHHHHHHHHHHHHHhCCCCCcEEEEEcc
Confidence 34445567899999999999998887753322234555665543
No 122
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=97.03 E-value=0.0016 Score=44.76 Aligned_cols=43 Identities=21% Similarity=0.302 Sum_probs=34.1
Q ss_pred hCCCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeecccccccc
Q psy5051 17 TGQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPIAFINH 62 (87)
Q Consensus 17 ~~~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~~~~~~ 62 (87)
++.++-.++|||+||.+++....++|+ ....+...+|...+.+
T Consensus 134 ~~~~~~~i~GhSlGGLfvl~aLL~~p~---~F~~y~~~SPSlWw~n 176 (264)
T COG2819 134 TNSERTAIIGHSLGGLFVLFALLTYPD---CFGRYGLISPSLWWHN 176 (264)
T ss_pred cCcccceeeeecchhHHHHHHHhcCcc---hhceeeeecchhhhCC
Confidence 345678999999999999999999998 5556678888765543
No 123
>COG1647 Esterase/lipase [General function prediction only]
Probab=97.02 E-value=0.0023 Score=43.20 Aligned_cols=41 Identities=20% Similarity=0.297 Sum_probs=32.1
Q ss_pred hCCCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeecccccccc
Q psy5051 17 TGQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPIAFINH 62 (87)
Q Consensus 17 ~~~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~~~~~~ 62 (87)
.+.+.+.++|-||||..++..+..+| +++++.+++......
T Consensus 82 ~gy~eI~v~GlSmGGv~alkla~~~p-----~K~iv~m~a~~~~k~ 122 (243)
T COG1647 82 AGYDEIAVVGLSMGGVFALKLAYHYP-----PKKIVPMCAPVNVKS 122 (243)
T ss_pred cCCCeEEEEeecchhHHHHHHHhhCC-----ccceeeecCCccccc
Confidence 56789999999999999999999886 455676665544333
No 124
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=96.99 E-value=0.0025 Score=47.63 Aligned_cols=62 Identities=18% Similarity=0.396 Sum_probs=40.7
Q ss_pred HHHHHHHHhC-CCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeeccccccc--cCChHHHHHHHh
Q psy5051 9 VIDYILSVTG-QPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPIAFIN--HVKSPVIRFLAT 73 (87)
Q Consensus 9 ~i~~v~~~~~-~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~~~~~--~~~~~~~~~l~~ 73 (87)
.++.|.+..+ ..|..++|.||||..++++++.+|+.+.-+ ++.-+|..++. ...+|+ +..++
T Consensus 128 Fv~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~~Pd~~gpl--vlaGaPlsywaG~~g~nPm-Ry~gg 192 (581)
T PF11339_consen 128 FVEEVAERHPDAPKPNLIGNCQGGWAAMMLAALRPDLVGPL--VLAGAPLSYWAGERGDNPM-RYMGG 192 (581)
T ss_pred HHHHHHHhCCCCCCceEEeccHHHHHHHHHHhcCcCccCce--eecCCCcccccCCCCCCcH-HHhcC
Confidence 4455555554 349999999999999999999999943332 12335777665 234454 44443
No 125
>PLN02408 phospholipase A1
Probab=96.98 E-value=0.0011 Score=47.42 Aligned_cols=33 Identities=24% Similarity=0.365 Sum_probs=23.4
Q ss_pred HHHHHHHHHhCCC--ceeEEEEChHHHHHHHHHHh
Q psy5051 8 VVIDYILSVTGQP--KLSYIGHSMGTTMFWVLLSE 40 (87)
Q Consensus 8 ~~i~~v~~~~~~~--~~~lvGHS~Gg~i~~~~a~~ 40 (87)
+.++++++..+.+ ++++.|||+||+++...+..
T Consensus 186 ~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~d 220 (365)
T PLN02408 186 EEIARLLQSYGDEPLSLTITGHSLGAALATLTAYD 220 (365)
T ss_pred HHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHH
Confidence 3344445555433 59999999999999887754
No 126
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=96.93 E-value=0.0014 Score=45.45 Aligned_cols=56 Identities=25% Similarity=0.340 Sum_probs=40.2
Q ss_pred cHHHHHHHHHHH----------hCCCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeeccccccc
Q psy5051 5 DLPVVIDYILSV----------TGQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPIAFIN 61 (87)
Q Consensus 5 D~~~~i~~v~~~----------~~~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~~~~~ 61 (87)
+....++|+.+. .+..++.++|||.||..++..|..+. ...++.+++.+.|..-..
T Consensus 95 ~aa~V~~WL~~gL~~~Lp~~V~~nl~klal~GHSrGGktAFAlALg~a-~~lkfsaLIGiDPV~G~~ 160 (307)
T PF07224_consen 95 SAASVINWLPEGLQHVLPENVEANLSKLALSGHSRGGKTAFALALGYA-TSLKFSALIGIDPVAGTS 160 (307)
T ss_pred HHHHHHHHHHhhhhhhCCCCcccccceEEEeecCCccHHHHHHHhccc-ccCchhheecccccCCCC
Confidence 344566666442 23569999999999999999998774 334677888888865443
No 127
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=96.87 E-value=0.0014 Score=44.87 Aligned_cols=49 Identities=10% Similarity=0.196 Sum_probs=34.6
Q ss_pred HHHHHHHHhCCCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeeccc
Q psy5051 9 VIDYILSVTGQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPI 57 (87)
Q Consensus 9 ~i~~v~~~~~~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~ 57 (87)
.++.+++.-+..+++++|||+||.+++..|..--..-+.+..++++.+.
T Consensus 54 yv~~Ir~~QP~GPy~L~G~S~GG~vA~evA~qL~~~G~~Va~L~llD~~ 102 (257)
T COG3319 54 YVAAIRRVQPEGPYVLLGWSLGGAVAFEVAAQLEAQGEEVAFLGLLDAV 102 (257)
T ss_pred HHHHHHHhCCCCCEEEEeeccccHHHHHHHHHHHhCCCeEEEEEEeccC
Confidence 3344555667779999999999999998886532222367777777654
No 128
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=96.87 E-value=0.0036 Score=45.30 Aligned_cols=37 Identities=14% Similarity=0.102 Sum_probs=30.5
Q ss_pred CCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeecccc
Q psy5051 19 QPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPIA 58 (87)
Q Consensus 19 ~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~~ 58 (87)
.++..+.|+||||..++..+.++|+ ....++.++|..
T Consensus 287 ~~~~~IaG~S~GGl~AL~~al~~Pd---~Fg~v~s~Sgs~ 323 (411)
T PRK10439 287 ADRTVVAGQSFGGLAALYAGLHWPE---RFGCVLSQSGSF 323 (411)
T ss_pred ccceEEEEEChHHHHHHHHHHhCcc---cccEEEEeccce
Confidence 3578899999999999999999999 455567777753
No 129
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=96.85 E-value=0.0011 Score=43.16 Aligned_cols=48 Identities=19% Similarity=0.457 Sum_probs=33.6
Q ss_pred cHHHHHHHHHHHh--CCCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeecc
Q psy5051 5 DLPVVIDYILSVT--GQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAP 56 (87)
Q Consensus 5 D~~~~i~~v~~~~--~~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p 56 (87)
|+.+.++++.+.. ..+++.++|.|+||.+++..+...+ .+++.+.+-|
T Consensus 81 ~~~aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~~----~~~a~v~~yg 130 (218)
T PF01738_consen 81 DLQAAVDYLRAQPEVDPGKIGVVGFCWGGKLALLLAARDP----RVDAAVSFYG 130 (218)
T ss_dssp HHHHHHHHHHCTTTCEEEEEEEEEETHHHHHHHHHHCCTT----TSSEEEEES-
T ss_pred HHHHHHHHHHhccccCCCcEEEEEEecchHHhhhhhhhcc----ccceEEEEcC
Confidence 4455566666554 3569999999999999999887663 3555555555
No 130
>PLN02324 triacylglycerol lipase
Probab=96.84 E-value=0.0014 Score=47.54 Aligned_cols=33 Identities=18% Similarity=0.356 Sum_probs=23.3
Q ss_pred HHHHHHHHHhCC--CceeEEEEChHHHHHHHHHHh
Q psy5051 8 VVIDYILSVTGQ--PKLSYIGHSMGTTMFWVLLSE 40 (87)
Q Consensus 8 ~~i~~v~~~~~~--~~~~lvGHS~Gg~i~~~~a~~ 40 (87)
+.+.++++..+. .++.+.|||+||+++...|..
T Consensus 201 ~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 201 GELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 334444554443 269999999999999888753
No 131
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=96.83 E-value=0.0031 Score=43.90 Aligned_cols=50 Identities=22% Similarity=0.344 Sum_probs=39.6
Q ss_pred HHHHHHHHHHhCC-CceeEEEEChHHHHHHHHHHhCCchhhhhhheeeeccccccc
Q psy5051 7 PVVIDYILSVTGQ-PKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPIAFIN 61 (87)
Q Consensus 7 ~~~i~~v~~~~~~-~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~~~~~ 61 (87)
...++.+++.++. +++.++|||.|+..++..++++| +.++++++|.+.-.
T Consensus 90 ~~~~~~ll~~l~i~~~~i~~gHSrGcenal~la~~~~-----~~g~~lin~~G~r~ 140 (297)
T PF06342_consen 90 QNFVNALLDELGIKGKLIFLGHSRGCENALQLAVTHP-----LHGLVLINPPGLRP 140 (297)
T ss_pred HHHHHHHHHHcCCCCceEEEEeccchHHHHHHHhcCc-----cceEEEecCCcccc
Confidence 3455666777664 68899999999999999999985 45889999987543
No 132
>COG0627 Predicted esterase [General function prediction only]
Probab=96.76 E-value=0.0014 Score=46.09 Aligned_cols=38 Identities=21% Similarity=0.180 Sum_probs=29.4
Q ss_pred ceeEEEEChHHHHHHHHHHhCCchhhhhhheeeeccccccc
Q psy5051 21 KLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPIAFIN 61 (87)
Q Consensus 21 ~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~~~~~ 61 (87)
+-.++||||||.=++.+|+++|++ .+.+..++|.....
T Consensus 153 ~~aI~G~SMGG~GAl~lA~~~pd~---f~~~sS~Sg~~~~s 190 (316)
T COG0627 153 GRAIAGHSMGGYGALKLALKHPDR---FKSASSFSGILSPS 190 (316)
T ss_pred CceeEEEeccchhhhhhhhhCcch---hceecccccccccc
Confidence 789999999999999999999984 44445556544433
No 133
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=96.76 E-value=0.0025 Score=44.22 Aligned_cols=53 Identities=17% Similarity=0.239 Sum_probs=41.9
Q ss_pred ccHHHHHHHHHHHhCCCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeeccccc
Q psy5051 4 YDLPVVIDYILSVTGQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPIAF 59 (87)
Q Consensus 4 ~D~~~~i~~v~~~~~~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~~~ 59 (87)
+++.+++..|+++++.+.+..+|=-.|+.|...||..+|+ ++.++++++|...
T Consensus 83 d~LAe~l~~Vl~~f~lk~vIg~GvGAGAnIL~rfAl~~p~---~V~GLiLvn~~~~ 135 (283)
T PF03096_consen 83 DQLAEMLPEVLDHFGLKSVIGFGVGAGANILARFALKHPE---RVLGLILVNPTCT 135 (283)
T ss_dssp HHHHCTHHHHHHHHT---EEEEEETHHHHHHHHHHHHSGG---GEEEEEEES---S
T ss_pred HHHHHHHHHHHHhCCccEEEEEeeccchhhhhhccccCcc---ceeEEEEEecCCC
Confidence 4667788889999999999999999999999999999998 6788899988543
No 134
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=96.71 E-value=0.0023 Score=42.35 Aligned_cols=41 Identities=20% Similarity=0.309 Sum_probs=35.7
Q ss_pred cccHHHHHHHHHHHhCCCce-eEEEEChHHHHHHHHHHhCCc
Q psy5051 3 IYDLPVVIDYILSVTGQPKL-SYIGHSMGTTMFWVLLSEKPE 43 (87)
Q Consensus 3 ~~D~~~~i~~v~~~~~~~~~-~lvGHS~Gg~i~~~~a~~~p~ 43 (87)
..|..+.++|+.++.+..+. ++.|.|.|+.+++..+.+.||
T Consensus 85 ~~Da~aaldW~~~~hp~s~~~~l~GfSFGa~Ia~~la~r~~e 126 (210)
T COG2945 85 LEDAAAALDWLQARHPDSASCWLAGFSFGAYIAMQLAMRRPE 126 (210)
T ss_pred HHHHHHHHHHHHhhCCCchhhhhcccchHHHHHHHHHHhccc
Confidence 46888999999988776555 889999999999999999887
No 135
>PLN02310 triacylglycerol lipase
Probab=96.66 E-value=0.0022 Score=46.48 Aligned_cols=20 Identities=25% Similarity=0.356 Sum_probs=17.6
Q ss_pred CceeEEEEChHHHHHHHHHH
Q psy5051 20 PKLSYIGHSMGTTMFWVLLS 39 (87)
Q Consensus 20 ~~~~lvGHS~Gg~i~~~~a~ 39 (87)
.++.+.|||+||+++...+.
T Consensus 209 ~sI~vTGHSLGGALAtLaA~ 228 (405)
T PLN02310 209 VSLTVTGHSLGGALALLNAY 228 (405)
T ss_pred ceEEEEcccHHHHHHHHHHH
Confidence 47999999999999988774
No 136
>PLN02802 triacylglycerol lipase
Probab=96.63 E-value=0.0026 Score=47.21 Aligned_cols=32 Identities=16% Similarity=0.327 Sum_probs=22.3
Q ss_pred HHHHHHHHhCC--CceeEEEEChHHHHHHHHHHh
Q psy5051 9 VIDYILSVTGQ--PKLSYIGHSMGTTMFWVLLSE 40 (87)
Q Consensus 9 ~i~~v~~~~~~--~~~~lvGHS~Gg~i~~~~a~~ 40 (87)
.+.++++..+. .++++.|||+||+++...+..
T Consensus 317 eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~d 350 (509)
T PLN02802 317 EVRRLMEKYKGEELSITVTGHSLGAALALLVADE 350 (509)
T ss_pred HHHHHHHhCCCCcceEEEeccchHHHHHHHHHHH
Confidence 34444444433 368999999999999887754
No 137
>KOG4569|consensus
Probab=96.61 E-value=0.0033 Score=44.37 Aligned_cols=36 Identities=14% Similarity=0.213 Sum_probs=29.1
Q ss_pred cHHHHHHHHHHHhCCCceeEEEEChHHHHHHHHHHh
Q psy5051 5 DLPVVIDYILSVTGQPKLSYIGHSMGTTMFWVLLSE 40 (87)
Q Consensus 5 D~~~~i~~v~~~~~~~~~~lvGHS~Gg~i~~~~a~~ 40 (87)
.+.+.++.+++..+.-++++.|||+||+++...+..
T Consensus 156 ~~~~~~~~L~~~~~~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 156 GLDAELRRLIELYPNYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHhcCCcEEEEecCChHHHHHHHHHHH
Confidence 455667777777777799999999999998877754
No 138
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=96.58 E-value=0.0046 Score=41.55 Aligned_cols=49 Identities=16% Similarity=0.407 Sum_probs=36.6
Q ss_pred ccHHHHHHHHHHHh--CCCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeecc
Q psy5051 4 YDLPVVIDYILSVT--GQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAP 56 (87)
Q Consensus 4 ~D~~~~i~~v~~~~--~~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p 56 (87)
.|+.+.++++.+.. ...++.++|.||||.+++.++...|+ +++.+.+-|
T Consensus 94 ~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~~----v~a~v~fyg 144 (236)
T COG0412 94 ADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAPE----VKAAVAFYG 144 (236)
T ss_pred HHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccCC----ccEEEEecC
Confidence 46677777777654 34679999999999999999988773 555555443
No 139
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=96.56 E-value=0.0051 Score=43.67 Aligned_cols=54 Identities=20% Similarity=0.225 Sum_probs=39.3
Q ss_pred ccHHHHHHHHHHHhCCCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeeccc
Q psy5051 4 YDLPVVIDYILSVTGQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPI 57 (87)
Q Consensus 4 ~D~~~~i~~v~~~~~~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~ 57 (87)
.|+...+++++++.+..+++.+|.|+||.+...|....-+....-.++...+|.
T Consensus 132 ~D~~~~l~~l~~~~~~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~ 185 (345)
T COG0429 132 EDIRFFLDWLKARFPPRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPF 185 (345)
T ss_pred hHHHHHHHHHHHhCCCCceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHH
Confidence 588889999999899999999999999977777776654422223334445564
No 140
>PLN02753 triacylglycerol lipase
Probab=96.54 E-value=0.0031 Score=47.08 Aligned_cols=20 Identities=20% Similarity=0.325 Sum_probs=17.9
Q ss_pred CceeEEEEChHHHHHHHHHH
Q psy5051 20 PKLSYIGHSMGTTMFWVLLS 39 (87)
Q Consensus 20 ~~~~lvGHS~Gg~i~~~~a~ 39 (87)
.++.+.|||+||+++...|.
T Consensus 312 ~sItVTGHSLGGALAtLaA~ 331 (531)
T PLN02753 312 LSITVTGHSLGGALAILSAY 331 (531)
T ss_pred ceEEEEccCHHHHHHHHHHH
Confidence 48999999999999988874
No 141
>PLN02719 triacylglycerol lipase
Probab=96.53 E-value=0.003 Score=46.97 Aligned_cols=21 Identities=19% Similarity=0.339 Sum_probs=18.0
Q ss_pred CceeEEEEChHHHHHHHHHHh
Q psy5051 20 PKLSYIGHSMGTTMFWVLLSE 40 (87)
Q Consensus 20 ~~~~lvGHS~Gg~i~~~~a~~ 40 (87)
.++.+.|||+||+++...|..
T Consensus 298 ~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 298 LSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred ceEEEecCcHHHHHHHHHHHH
Confidence 379999999999999887753
No 142
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=96.50 E-value=0.0045 Score=43.45 Aligned_cols=49 Identities=16% Similarity=0.312 Sum_probs=35.1
Q ss_pred cHHHHHHHHHHHhC--CCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeeccc
Q psy5051 5 DLPVVIDYILSVTG--QPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPI 57 (87)
Q Consensus 5 D~~~~i~~v~~~~~--~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~ 57 (87)
|.-..++.+..... .+++.+.|.|+||.+++..++..| +|++++..-|.
T Consensus 158 D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~----rv~~~~~~vP~ 208 (320)
T PF05448_consen 158 DAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP----RVKAAAADVPF 208 (320)
T ss_dssp HHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS----T-SEEEEESES
T ss_pred HHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc----cccEEEecCCC
Confidence 44455666665443 469999999999999999999876 46666666564
No 143
>KOG2984|consensus
Probab=96.50 E-value=0.00096 Score=44.86 Aligned_cols=51 Identities=22% Similarity=0.320 Sum_probs=41.1
Q ss_pred HHHHhCCCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeeccccccccCChH
Q psy5051 13 ILSVTGQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPIAFINHVKSP 66 (87)
Q Consensus 13 v~~~~~~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~~~~~~~~~~ 66 (87)
+++.+..+++.++|+|-||..++..|++++| ++..++..+...+.++....
T Consensus 107 LM~aLk~~~fsvlGWSdGgiTalivAak~~e---~v~rmiiwga~ayvn~~~~m 157 (277)
T KOG2984|consen 107 LMEALKLEPFSVLGWSDGGITALIVAAKGKE---KVNRMIIWGAAAYVNHLGAM 157 (277)
T ss_pred HHHHhCCCCeeEeeecCCCeEEEEeeccChh---hhhhheeecccceecchhHH
Confidence 4566788999999999999999999999998 56666788877777665443
No 144
>KOG2931|consensus
Probab=96.49 E-value=0.0045 Score=43.39 Aligned_cols=52 Identities=15% Similarity=0.192 Sum_probs=46.3
Q ss_pred cccHHHHHHHHHHHhCCCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeeccc
Q psy5051 3 IYDLPVVIDYILSVTGQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPI 57 (87)
Q Consensus 3 ~~D~~~~i~~v~~~~~~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~ 57 (87)
.+|+.+++..|+++++.+.++.+|--.|+.|...||..+|+ +|.+++++.+.
T Consensus 105 md~LAd~l~~VL~~f~lk~vIg~GvGAGAyIL~rFAl~hp~---rV~GLvLIn~~ 156 (326)
T KOG2931|consen 105 MDDLADMLPEVLDHFGLKSVIGMGVGAGAYILARFALNHPE---RVLGLVLINCD 156 (326)
T ss_pred HHHHHHHHHHHHHhcCcceEEEecccccHHHHHHHHhcChh---heeEEEEEecC
Confidence 35788899999999999999999999999999999999999 67778888764
No 145
>PLN02761 lipase class 3 family protein
Probab=96.48 E-value=0.0034 Score=46.80 Aligned_cols=20 Identities=25% Similarity=0.408 Sum_probs=17.5
Q ss_pred CceeEEEEChHHHHHHHHHH
Q psy5051 20 PKLSYIGHSMGTTMFWVLLS 39 (87)
Q Consensus 20 ~~~~lvGHS~Gg~i~~~~a~ 39 (87)
.++++.|||+||+++...+.
T Consensus 294 ~sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 294 ISITVTGHSLGASLALVSAY 313 (527)
T ss_pred ceEEEeccchHHHHHHHHHH
Confidence 37999999999999988774
No 146
>PRK04940 hypothetical protein; Provisional
Probab=96.42 E-value=0.0086 Score=39.06 Aligned_cols=36 Identities=14% Similarity=-0.034 Sum_probs=28.7
Q ss_pred CceeEEEEChHHHHHHHHHHhCCchhhhhhheeeeccccccc
Q psy5051 20 PKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPIAFIN 61 (87)
Q Consensus 20 ~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~~~~~ 61 (87)
+++.++|+|+||.-+.+++.++. + ..|++.|.....
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~g-----~-~aVLiNPAv~P~ 95 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLCG-----I-RQVIFNPNLFPE 95 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHHC-----C-CEEEECCCCChH
Confidence 57999999999999999988763 3 357888876553
No 147
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=96.40 E-value=0.0051 Score=49.11 Aligned_cols=53 Identities=13% Similarity=0.127 Sum_probs=36.4
Q ss_pred ccHHHHHHHHHHH----hCCCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeecc
Q psy5051 4 YDLPVVIDYILSV----TGQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAP 56 (87)
Q Consensus 4 ~D~~~~i~~v~~~----~~~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p 56 (87)
+++.++.+++.+. .+..+++++|||+||.+++.++...++..+++..++++++
T Consensus 1113 ~~l~~la~~~~~~i~~~~~~~p~~l~G~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~ 1169 (1296)
T PRK10252 1113 TSLDEVCEAHLATLLEQQPHGPYHLLGYSLGGTLAQGIAARLRARGEEVAFLGLLDT 1169 (1296)
T ss_pred CCHHHHHHHHHHHHHhhCCCCCEEEEEechhhHHHHHHHHHHHHcCCceeEEEEecC
Confidence 4666666665442 2345899999999999999998764333336666666654
No 148
>PLN03037 lipase class 3 family protein; Provisional
Probab=96.37 E-value=0.0048 Score=46.03 Aligned_cols=21 Identities=29% Similarity=0.403 Sum_probs=17.9
Q ss_pred CceeEEEEChHHHHHHHHHHh
Q psy5051 20 PKLSYIGHSMGTTMFWVLLSE 40 (87)
Q Consensus 20 ~~~~lvGHS~Gg~i~~~~a~~ 40 (87)
.++++.|||+||+++...+..
T Consensus 318 ~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 318 VSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred ceEEEeccCHHHHHHHHHHHH
Confidence 379999999999999887743
No 149
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=96.36 E-value=0.0056 Score=42.46 Aligned_cols=35 Identities=14% Similarity=0.236 Sum_probs=27.5
Q ss_pred CceeEEEEChHHHHHHHHHHhCCchhhhhhheeeecc
Q psy5051 20 PKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAP 56 (87)
Q Consensus 20 ~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p 56 (87)
+-++++|+|+||.+...++.+.|+. .++.+|.++.
T Consensus 80 ~G~~~IGfSQGgl~lRa~vq~c~~~--~V~nlISlgg 114 (279)
T PF02089_consen 80 NGFNAIGFSQGGLFLRAYVQRCNDP--PVHNLISLGG 114 (279)
T ss_dssp T-EEEEEETCHHHHHHHHHHH-TSS---EEEEEEES-
T ss_pred cceeeeeeccccHHHHHHHHHCCCC--CceeEEEecC
Confidence 4699999999999999999998863 6888888864
No 150
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=96.32 E-value=0.015 Score=37.74 Aligned_cols=52 Identities=15% Similarity=0.266 Sum_probs=34.2
Q ss_pred cHHHHHHHHHHHh-CCCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeeccccc
Q psy5051 5 DLPVVIDYILSVT-GQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPIAF 59 (87)
Q Consensus 5 D~~~~i~~v~~~~-~~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~~~ 59 (87)
++..+++-+.... +..++.++|||.|+.++-..+...+. .+..+++++.++.
T Consensus 93 ~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~---~vddvv~~GSPG~ 145 (177)
T PF06259_consen 93 RLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGL---RVDDVVLVGSPGM 145 (177)
T ss_pred HHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCC---CcccEEEECCCCC
Confidence 3444555555444 45689999999999998777665344 4445567765443
No 151
>PLN02633 palmitoyl protein thioesterase family protein
Probab=96.32 E-value=0.012 Score=41.34 Aligned_cols=50 Identities=14% Similarity=0.054 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHhC-----CCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeecc
Q psy5051 6 LPVVIDYILSVTG-----QPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAP 56 (87)
Q Consensus 6 ~~~~i~~v~~~~~-----~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p 56 (87)
+.+.++.+++... .+-++++||||||.+...++.+.|+. ..++.+|.++.
T Consensus 75 ~~~Qve~vce~l~~~~~l~~G~naIGfSQGGlflRa~ierc~~~-p~V~nlISlgg 129 (314)
T PLN02633 75 LTQQAEIACEKVKQMKELSQGYNIVGRSQGNLVARGLIEFCDGG-PPVYNYISLAG 129 (314)
T ss_pred HHHHHHHHHHHHhhchhhhCcEEEEEEccchHHHHHHHHHCCCC-CCcceEEEecC
Confidence 4445555544321 23599999999999999999998861 25888888863
No 152
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=96.32 E-value=0.0058 Score=47.68 Aligned_cols=22 Identities=27% Similarity=0.487 Sum_probs=19.8
Q ss_pred CCceeEEEEChHHHHHHHHHHh
Q psy5051 19 QPKLSYIGHSMGTTMFWVLLSE 40 (87)
Q Consensus 19 ~~~~~lvGHS~Gg~i~~~~a~~ 40 (87)
..+++++||||||.++..++..
T Consensus 554 ~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 554 GSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred CCcEEEEecCHHHHHHHHHHHh
Confidence 4589999999999999999875
No 153
>KOG4840|consensus
Probab=96.31 E-value=0.0037 Score=42.63 Aligned_cols=55 Identities=24% Similarity=0.275 Sum_probs=40.1
Q ss_pred ccHHHHHHHHHHHhCCCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeeccccc
Q psy5051 4 YDLPVVIDYILSVTGQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPIAF 59 (87)
Q Consensus 4 ~D~~~~i~~v~~~~~~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~~~ 59 (87)
+|+...++++...-..+++.++|||-|..=.++|. ++.....++++.++.+|+..
T Consensus 91 edl~~l~~Hi~~~~fSt~vVL~GhSTGcQdi~yYl-Tnt~~~r~iraaIlqApVSD 145 (299)
T KOG4840|consen 91 EDLKCLLEHIQLCGFSTDVVLVGHSTGCQDIMYYL-TNTTKDRKIRAAILQAPVSD 145 (299)
T ss_pred HHHHHHHHHhhccCcccceEEEecCccchHHHHHH-HhccchHHHHHHHHhCccch
Confidence 35555666554433456999999999999999988 44444558888999999764
No 154
>PLN02606 palmitoyl-protein thioesterase
Probab=96.31 E-value=0.013 Score=41.07 Aligned_cols=51 Identities=8% Similarity=-0.015 Sum_probs=36.5
Q ss_pred cHHHHHHHHHHHhC-----CCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeecc
Q psy5051 5 DLPVVIDYILSVTG-----QPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAP 56 (87)
Q Consensus 5 D~~~~i~~v~~~~~-----~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p 56 (87)
++.+.++.+++... .+-++++|+||||.+...++.+.|+. ..++.+|.++.
T Consensus 75 ~~~~Qv~~vce~l~~~~~L~~G~naIGfSQGglflRa~ierc~~~-p~V~nlISlgg 130 (306)
T PLN02606 75 PLRQQASIACEKIKQMKELSEGYNIVAESQGNLVARGLIEFCDNA-PPVINYVSLGG 130 (306)
T ss_pred CHHHHHHHHHHHHhcchhhcCceEEEEEcchhHHHHHHHHHCCCC-CCcceEEEecC
Confidence 34455555554321 23599999999999999999998861 26888888864
No 155
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=96.27 E-value=0.0094 Score=42.51 Aligned_cols=37 Identities=24% Similarity=0.291 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHhCCCceeEEEEChHHHHHHHHHHhCCc
Q psy5051 6 LPVVIDYILSVTGQPKLSYIGHSMGTTMFWVLLSEKPE 43 (87)
Q Consensus 6 ~~~~i~~v~~~~~~~~~~lvGHS~Gg~i~~~~a~~~p~ 43 (87)
...+++++.++ |..++-+.|-||||.++...++..|.
T Consensus 162 ~~~Ll~Wl~~~-G~~~~g~~G~SmGG~~A~laa~~~p~ 198 (348)
T PF09752_consen 162 SRALLHWLERE-GYGPLGLTGISMGGHMAALAASNWPR 198 (348)
T ss_pred HHHHHHHHHhc-CCCceEEEEechhHhhHHhhhhcCCC
Confidence 34455666666 88899999999999999999999987
No 156
>PLN02847 triacylglycerol lipase
Probab=96.22 E-value=0.0083 Score=45.54 Aligned_cols=45 Identities=24% Similarity=0.340 Sum_probs=28.8
Q ss_pred HHHhCCCceeEEEEChHHHHHHHHHHh---CCchhhhhhheeeecccccc
Q psy5051 14 LSVTGQPKLSYIGHSMGTTMFWVLLSE---KPEYNDKIEVMIGMAPIAFI 60 (87)
Q Consensus 14 ~~~~~~~~~~lvGHS~Gg~i~~~~a~~---~p~~~~~l~~~v~~~p~~~~ 60 (87)
++..+.-++.++|||+||.++..++.. ++++ ..+ .++.++|....
T Consensus 245 l~~~PdYkLVITGHSLGGGVAALLAilLRe~~~f-ssi-~CyAFgPp~cv 292 (633)
T PLN02847 245 LDEYPDFKIKIVGHSLGGGTAALLTYILREQKEF-SST-TCVTFAPAACM 292 (633)
T ss_pred HHHCCCCeEEEeccChHHHHHHHHHHHHhcCCCC-CCc-eEEEecCchhc
Confidence 344555589999999999998877654 2222 122 25677775433
No 157
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=96.21 E-value=0.0043 Score=44.48 Aligned_cols=37 Identities=22% Similarity=0.379 Sum_probs=25.1
Q ss_pred CCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeeccccc
Q psy5051 19 QPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPIAF 59 (87)
Q Consensus 19 ~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~~~ 59 (87)
.+++.++|||.||+.+...+.... +++..+.+.|..+
T Consensus 227 ~~~i~~~GHSFGGATa~~~l~~d~----r~~~~I~LD~W~~ 263 (379)
T PF03403_consen 227 LSRIGLAGHSFGGATALQALRQDT----RFKAGILLDPWMF 263 (379)
T ss_dssp EEEEEEEEETHHHHHHHHHHHH-T----T--EEEEES---T
T ss_pred hhheeeeecCchHHHHHHHHhhcc----CcceEEEeCCccc
Confidence 457899999999999998876652 5777778877543
No 158
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=96.05 E-value=0.015 Score=42.33 Aligned_cols=49 Identities=16% Similarity=0.300 Sum_probs=35.3
Q ss_pred HHHHHHHHHHh--CCCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeecccc
Q psy5051 7 PVVIDYILSVT--GQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPIA 58 (87)
Q Consensus 7 ~~~i~~v~~~~--~~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~~ 58 (87)
.++++++.+.. +.+++.++|-|+||..+...|...++ +|++++..+|..
T Consensus 246 ~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~---RlkavV~~Ga~v 296 (411)
T PF06500_consen 246 QAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDP---RLKAVVALGAPV 296 (411)
T ss_dssp HHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTT---T-SEEEEES---
T ss_pred HHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhccc---ceeeEeeeCchH
Confidence 34566665543 34599999999999999999887766 799999998853
No 159
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=95.99 E-value=0.0074 Score=41.44 Aligned_cols=59 Identities=10% Similarity=0.136 Sum_probs=39.3
Q ss_pred cccHHHHHHHHHHHh-----CCCceeEEEEChHHHHHHHHHHhCCch-hhhhhheeeeccccccc
Q psy5051 3 IYDLPVVIDYILSVT-----GQPKLSYIGHSMGTTMFWVLLSEKPEY-NDKIEVMIGMAPIAFIN 61 (87)
Q Consensus 3 ~~D~~~~i~~v~~~~-----~~~~~~lvGHS~Gg~i~~~~a~~~p~~-~~~l~~~v~~~p~~~~~ 61 (87)
.+|..+...++.+.. ..+++.++|||.||.+++.++..-.+. .......+++.|.....
T Consensus 130 ~~d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~ 194 (312)
T COG0657 130 LEDAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLT 194 (312)
T ss_pred HHHHHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCc
Confidence 345666666666542 257899999999999998887653321 12355667788865444
No 160
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=95.85 E-value=0.017 Score=41.99 Aligned_cols=54 Identities=19% Similarity=0.325 Sum_probs=38.1
Q ss_pred CcccHHHHHHHHHHH---hC--CCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeecc
Q psy5051 2 GIYDLPVVIDYILSV---TG--QPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAP 56 (87)
Q Consensus 2 a~~D~~~~i~~v~~~---~~--~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p 56 (87)
+..|..+.++++.+. ++ .+++.++|||.||..+...+.. |......+++++.+.
T Consensus 153 g~~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~-~~~~~lf~~~i~~sg 211 (493)
T cd00312 153 GLKDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLS-PDSKGLFHRAISQSG 211 (493)
T ss_pred hHHHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhC-cchhHHHHHHhhhcC
Confidence 346788888888765 33 4699999999999998877654 443334555666554
No 161
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=95.73 E-value=0.012 Score=42.49 Aligned_cols=43 Identities=21% Similarity=0.446 Sum_probs=28.6
Q ss_pred HHHHHHHHHh--CCCceeEEEEChHHHHHHHHHHhCCchhhhhhheeee
Q psy5051 8 VVIDYILSVT--GQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGM 54 (87)
Q Consensus 8 ~~i~~v~~~~--~~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~ 54 (87)
..+|++.... ..++|-++|+||||..++..++..+ +|++.+..
T Consensus 212 r~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaALDd----RIka~v~~ 256 (390)
T PF12715_consen 212 RALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAALDD----RIKATVAN 256 (390)
T ss_dssp HHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHHH-T----T--EEEEE
T ss_pred HHHHHHhcCcccCccceEEEeecccHHHHHHHHHcch----hhHhHhhh
Confidence 3555554433 3479999999999999999998765 56555443
No 162
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=95.72 E-value=0.031 Score=39.23 Aligned_cols=44 Identities=23% Similarity=0.217 Sum_probs=36.7
Q ss_pred cHHHHHHHHHHHhCCC--ceeEEEEChHHHHHHHHHHhCCchhhhh
Q psy5051 5 DLPVVIDYILSVTGQP--KLSYIGHSMGTTMFWVLLSEKPEYNDKI 48 (87)
Q Consensus 5 D~~~~i~~v~~~~~~~--~~~lvGHS~Gg~i~~~~a~~~p~~~~~l 48 (87)
++.++++.+..+++.+ ++++.|.|-||.++..+++.+|+....+
T Consensus 127 flr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~ 172 (312)
T COG3509 127 FLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAI 172 (312)
T ss_pred HHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccce
Confidence 4567778888888776 9999999999999999999999854443
No 163
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=95.47 E-value=0.029 Score=40.05 Aligned_cols=40 Identities=25% Similarity=0.436 Sum_probs=28.3
Q ss_pred hCCCceeEEEEChHHHHHHHHHHhCCch--hhhhhheeeecc
Q psy5051 17 TGQPKLSYIGHSMGTTMFWVLLSEKPEY--NDKIEVMIGMAP 56 (87)
Q Consensus 17 ~~~~~~~lvGHS~Gg~i~~~~a~~~p~~--~~~l~~~v~~~p 56 (87)
.+.+++.++|||+|+.+.+.....-.++ ...|..+++++.
T Consensus 217 ~G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Ga 258 (345)
T PF05277_consen 217 QGERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGA 258 (345)
T ss_pred CCCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecC
Confidence 4667999999999999987776554433 123566677764
No 164
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=95.31 E-value=0.09 Score=36.79 Aligned_cols=55 Identities=20% Similarity=0.208 Sum_probs=39.7
Q ss_pred hCCCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeeccccccccCChHHHHHHHh
Q psy5051 17 TGQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPIAFINHVKSPVIRFLAT 73 (87)
Q Consensus 17 ~~~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~~~~~~~~~~~~~~l~~ 73 (87)
.+..++.++||+.|+..+..|.+..+.- .+.++|+++|.......+..+.+.+++
T Consensus 190 ~~~~~ivlIg~G~gA~~~~~~la~~~~~--~~daLV~I~a~~p~~~~n~~l~~~la~ 244 (310)
T PF12048_consen 190 QGGKNIVLIGHGTGAGWAARYLAEKPPP--MPDALVLINAYWPQPDRNPALAEQLAQ 244 (310)
T ss_pred cCCceEEEEEeChhHHHHHHHHhcCCCc--ccCeEEEEeCCCCcchhhhhHHHHhhc
Confidence 4556699999999999999999988752 477889999865444433344444444
No 165
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=95.21 E-value=0.024 Score=41.08 Aligned_cols=54 Identities=19% Similarity=0.317 Sum_probs=39.0
Q ss_pred CcccHHHHHHHHHHH---hC--CCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeecc
Q psy5051 2 GIYDLPVVIDYILSV---TG--QPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAP 56 (87)
Q Consensus 2 a~~D~~~~i~~v~~~---~~--~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p 56 (87)
+..|....+++|.+. +| .++|.+.|||.||..+...+.. |.-..-.++.++.++
T Consensus 185 Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~s-p~~~~LF~raI~~SG 243 (535)
T PF00135_consen 185 GLLDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLS-PSSKGLFHRAILQSG 243 (535)
T ss_dssp HHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHG-GGGTTSBSEEEEES-
T ss_pred hhhhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeec-ccccccccccccccc
Confidence 345888889999875 44 3689999999999998877765 543334566677665
No 166
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=95.15 E-value=0.034 Score=39.79 Aligned_cols=38 Identities=18% Similarity=0.284 Sum_probs=29.1
Q ss_pred ccHHHHHHHHHHHh---CCCceeEEEEChHHHHHHHHHHhC
Q psy5051 4 YDLPVVIDYILSVT---GQPKLSYIGHSMGTTMFWVLLSEK 41 (87)
Q Consensus 4 ~D~~~~i~~v~~~~---~~~~~~lvGHS~Gg~i~~~~a~~~ 41 (87)
.|..+++++++++. +.+++..-|||+||.++...+..+
T Consensus 196 ~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 196 KDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred HHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhc
Confidence 35677888888643 347999999999999988765544
No 167
>KOG4540|consensus
Probab=95.12 E-value=0.028 Score=39.71 Aligned_cols=33 Identities=15% Similarity=0.246 Sum_probs=25.2
Q ss_pred HHHHHHHHhCCCceeEEEEChHHHHHHHHHHhC
Q psy5051 9 VIDYILSVTGQPKLSYIGHSMGTTMFWVLLSEK 41 (87)
Q Consensus 9 ~i~~v~~~~~~~~~~lvGHS~Gg~i~~~~a~~~ 41 (87)
+...+++..+..++++.|||+||+++...-.++
T Consensus 265 I~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~f 297 (425)
T KOG4540|consen 265 ILGAVRRIYPDARIWLTGHSLGGAIASLLGIRF 297 (425)
T ss_pred HHHHHHHhCCCceEEEeccccchHHHHHhcccc
Confidence 334456677888999999999999987665544
No 168
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=95.12 E-value=0.028 Score=39.71 Aligned_cols=33 Identities=15% Similarity=0.246 Sum_probs=25.2
Q ss_pred HHHHHHHHhCCCceeEEEEChHHHHHHHHHHhC
Q psy5051 9 VIDYILSVTGQPKLSYIGHSMGTTMFWVLLSEK 41 (87)
Q Consensus 9 ~i~~v~~~~~~~~~~lvGHS~Gg~i~~~~a~~~ 41 (87)
+...+++..+..++++.|||+||+++...-.++
T Consensus 265 I~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~f 297 (425)
T COG5153 265 ILGAVRRIYPDARIWLTGHSLGGAIASLLGIRF 297 (425)
T ss_pred HHHHHHHhCCCceEEEeccccchHHHHHhcccc
Confidence 334456677888999999999999987665544
No 169
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=94.91 E-value=0.06 Score=42.00 Aligned_cols=51 Identities=24% Similarity=0.256 Sum_probs=39.1
Q ss_pred ccHHHHHHHHHHHh--------------C--CCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeeccc
Q psy5051 4 YDLPVVIDYILSVT--------------G--QPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPI 57 (87)
Q Consensus 4 ~D~~~~i~~v~~~~--------------~--~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~ 57 (87)
.|..+.|+++..+. . ..++-++|.|+||.+++..|+..|+ .+++++..++.
T Consensus 306 ~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G~~~~~aAa~~pp---~LkAIVp~a~i 372 (767)
T PRK05371 306 ESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLGTLPNAVATTGVE---GLETIIPEAAI 372 (767)
T ss_pred HHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHHHHHHHHHHhhCCC---cceEEEeeCCC
Confidence 57788899987431 1 3599999999999999999888776 56666666554
No 170
>KOG1553|consensus
Probab=94.70 E-value=0.054 Score=39.27 Aligned_cols=47 Identities=21% Similarity=0.306 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHhC--CCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeecc
Q psy5051 6 LPVVIDYILSVTG--QPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAP 56 (87)
Q Consensus 6 ~~~~i~~v~~~~~--~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p 56 (87)
.++++++..+.++ .+.+++.|+|.||--+.+.|+.+|+ ++++++=+.
T Consensus 295 ~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~YPd----VkavvLDAt 343 (517)
T KOG1553|consen 295 ADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYPD----VKAVVLDAT 343 (517)
T ss_pred HHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcCCC----ceEEEeecc
Confidence 3456666666655 5789999999999999999999997 555665443
No 171
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=94.68 E-value=0.14 Score=36.94 Aligned_cols=52 Identities=15% Similarity=0.144 Sum_probs=36.5
Q ss_pred cccHHHHHHHHHHHh---CCCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeeccc
Q psy5051 3 IYDLPVVIDYILSVT---GQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPI 57 (87)
Q Consensus 3 ~~D~~~~i~~v~~~~---~~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~ 57 (87)
..|+...++++.+.. ...|++++|-|-||+++.++-.++|+. +.+.+..+++
T Consensus 93 LaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~---~~ga~ASSap 147 (434)
T PF05577_consen 93 LADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYPHL---FDGAWASSAP 147 (434)
T ss_dssp HHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-TTT----SEEEEET--
T ss_pred HHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCCCe---eEEEEeccce
Confidence 457888888887654 345899999999999999999999994 5555655443
No 172
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=94.67 E-value=0.079 Score=35.81 Aligned_cols=49 Identities=18% Similarity=0.283 Sum_probs=38.5
Q ss_pred ccHHHHHHHHHHHhCC--CceeEEEEChHHHHHHHHHHhCCchhhhhhheeeecc
Q psy5051 4 YDLPVVIDYILSVTGQ--PKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAP 56 (87)
Q Consensus 4 ~D~~~~i~~v~~~~~~--~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p 56 (87)
.|..+.|+++.+. ++ .++-.+|.|.+|...+..++..|. .|++++...+
T Consensus 84 ~D~~d~I~W~~~Q-pws~G~VGm~G~SY~G~~q~~~A~~~~p---~LkAi~p~~~ 134 (272)
T PF02129_consen 84 QDGYDTIEWIAAQ-PWSNGKVGMYGISYGGFTQWAAAARRPP---HLKAIVPQSG 134 (272)
T ss_dssp HHHHHHHHHHHHC-TTEEEEEEEEEETHHHHHHHHHHTTT-T---TEEEEEEESE
T ss_pred HHHHHHHHHHHhC-CCCCCeEEeeccCHHHHHHHHHHhcCCC---CceEEEeccc
Confidence 5778899998886 44 489999999999999999987665 5776666554
No 173
>KOG3975|consensus
Probab=94.65 E-value=0.075 Score=36.82 Aligned_cols=44 Identities=23% Similarity=0.271 Sum_probs=29.7
Q ss_pred HHHHhC-CCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeeccc
Q psy5051 13 ILSVTG-QPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPI 57 (87)
Q Consensus 13 v~~~~~-~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~ 57 (87)
+.+..+ ..|++++|||-|+.+.+...-.... .-.+...+++-|.
T Consensus 102 ik~~~Pk~~ki~iiGHSiGaYm~Lqil~~~k~-~~~vqKa~~LFPT 146 (301)
T KOG3975|consen 102 IKEYVPKDRKIYIIGHSIGAYMVLQILPSIKL-VFSVQKAVLLFPT 146 (301)
T ss_pred HHHhCCCCCEEEEEecchhHHHHHHHhhhccc-ccceEEEEEecch
Confidence 444444 4699999999999999887753221 2256666666664
No 174
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=94.63 E-value=0.057 Score=40.95 Aligned_cols=39 Identities=21% Similarity=0.347 Sum_probs=27.3
Q ss_pred cHHHHHHHHHHHhC--CCceeEEEEChHHHHHHHHHHhCCc
Q psy5051 5 DLPVVIDYILSVTG--QPKLSYIGHSMGTTMFWVLLSEKPE 43 (87)
Q Consensus 5 D~~~~i~~v~~~~~--~~~~~lvGHS~Gg~i~~~~a~~~p~ 43 (87)
|+-+.++.+.+... .+++.+.|||.||.++++.+...|.
T Consensus 456 D~~~~~~~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~~ 496 (620)
T COG1506 456 DLIAAVDALVKLPLVDPERIGITGGSYGGYMTLLAATKTPR 496 (620)
T ss_pred HHHHHHHHHHhCCCcChHHeEEeccChHHHHHHHHHhcCch
Confidence 44444553323222 3489999999999999999988774
No 175
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=94.60 E-value=0.069 Score=39.73 Aligned_cols=56 Identities=20% Similarity=0.368 Sum_probs=40.3
Q ss_pred CcccHHHHHHHHHHH---hC--CCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeecccc
Q psy5051 2 GIYDLPVVIDYILSV---TG--QPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPIA 58 (87)
Q Consensus 2 a~~D~~~~i~~v~~~---~~--~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~~ 58 (87)
+..|.-..+++|.+. +| .+++.+.|+|.|++.++...+ .|+..--....++.++..
T Consensus 157 Gl~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla-~P~AkGLF~rAi~~Sg~~ 217 (491)
T COG2272 157 GLLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLA-VPSAKGLFHRAIALSGAA 217 (491)
T ss_pred cHHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhc-CccchHHHHHHHHhCCCC
Confidence 346777888888764 44 468999999999999887775 476444455566776644
No 176
>KOG2183|consensus
Probab=94.47 E-value=0.046 Score=40.19 Aligned_cols=59 Identities=12% Similarity=0.235 Sum_probs=44.0
Q ss_pred cccHHHHHHHHHHHhC--CCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeeccccccccC
Q psy5051 3 IYDLPVVIDYILSVTG--QPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPIAFINHV 63 (87)
Q Consensus 3 ~~D~~~~i~~v~~~~~--~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~~~~~~~ 63 (87)
..|++.++..+++..+ ..+++.+|-|-||+++.++=.++|+.+ +-++...+|..++.+.
T Consensus 148 LADfA~ll~~lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv--~GAlAaSAPvl~f~d~ 208 (492)
T KOG2183|consen 148 LADFAELLTFLKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPHIV--LGALAASAPVLYFEDT 208 (492)
T ss_pred HHHHHHHHHHHhhccccccCcEEEecCchhhHHHHHHHhcChhhh--hhhhhccCceEeecCC
Confidence 3477778888877654 458999999999999999999999852 2234466777666553
No 177
>COG4099 Predicted peptidase [General function prediction only]
Probab=94.33 E-value=0.091 Score=37.35 Aligned_cols=41 Identities=22% Similarity=0.334 Sum_probs=31.1
Q ss_pred HHHHhC--CCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeecc
Q psy5051 13 ILSVTG--QPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAP 56 (87)
Q Consensus 13 v~~~~~--~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p 56 (87)
+.++.+ ..+++++|.|+||.-++..+..+|+ ...+.+.++.
T Consensus 260 las~ynID~sRIYviGlSrG~~gt~al~~kfPd---fFAaa~~iaG 302 (387)
T COG4099 260 LASTYNIDRSRIYVIGLSRGGFGTWALAEKFPD---FFAAAVPIAG 302 (387)
T ss_pred HhhccCcccceEEEEeecCcchhhHHHHHhCch---hhheeeeecC
Confidence 334444 4689999999999999999999998 4555555554
No 178
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=94.27 E-value=0.035 Score=36.48 Aligned_cols=53 Identities=15% Similarity=0.207 Sum_probs=28.5
Q ss_pred cHHHHHHHHHHHhCC-Cc-eeEEEEChHHHHHHHHHHhCCch-----hhhhhheeeeccc
Q psy5051 5 DLPVVIDYILSVTGQ-PK-LSYIGHSMGTTMFWVLLSEKPEY-----NDKIEVMIGMAPI 57 (87)
Q Consensus 5 D~~~~i~~v~~~~~~-~~-~~lvGHS~Gg~i~~~~a~~~p~~-----~~~l~~~v~~~p~ 57 (87)
++.+.++++.+.... .+ .-++|.|||+.++..+++..... ...++.+|+++..
T Consensus 85 ~~~~sl~~l~~~i~~~GPfdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~ 144 (212)
T PF03959_consen 85 GLDESLDYLRDYIEENGPFDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGF 144 (212)
T ss_dssp --HHHHHHHHHHHHHH---SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES--
T ss_pred CHHHHHHHHHHHHHhcCCeEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEccc
Confidence 455556666543221 12 45899999999998888653221 1245667777653
No 179
>KOG4391|consensus
Probab=94.26 E-value=0.0077 Score=41.01 Aligned_cols=47 Identities=26% Similarity=0.482 Sum_probs=37.5
Q ss_pred ccHHHHHHHHHHHhC--CCceeEEEEChHHHHHHHHHHhCCchhhhhhheee
Q psy5051 4 YDLPVVIDYILSVTG--QPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIG 53 (87)
Q Consensus 4 ~D~~~~i~~v~~~~~--~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~ 53 (87)
-|-.+.++++..+.. ..|+.+.|-|+||+++...++.+.+ ++.++++
T Consensus 131 lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~---ri~~~iv 179 (300)
T KOG4391|consen 131 LDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSD---RISAIIV 179 (300)
T ss_pred ccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchh---heeeeee
Confidence 477889999987654 5689999999999999999998866 4554443
No 180
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=94.21 E-value=0.082 Score=38.90 Aligned_cols=22 Identities=18% Similarity=0.084 Sum_probs=18.9
Q ss_pred CCceeEEEEChHHHHHHHHHHh
Q psy5051 19 QPKLSYIGHSMGTTMFWVLLSE 40 (87)
Q Consensus 19 ~~~~~lvGHS~Gg~i~~~~a~~ 40 (87)
..+++++|||+||..+..++..
T Consensus 170 ~~~~~i~GeSygG~y~p~~a~~ 191 (462)
T PTZ00472 170 ANDLFVVGESYGGHYAPATAYR 191 (462)
T ss_pred CCCEEEEeecchhhhHHHHHHH
Confidence 4799999999999998777755
No 181
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=94.18 E-value=0.11 Score=37.50 Aligned_cols=53 Identities=17% Similarity=0.235 Sum_probs=35.8
Q ss_pred HHHHHHHHhCCCceeEEEEChHHHHHHHHHHhCC--chhhhhhheeeeccccccc
Q psy5051 9 VIDYILSVTGQPKLSYIGHSMGTTMFWVLLSEKP--EYNDKIEVMIGMAPIAFIN 61 (87)
Q Consensus 9 ~i~~v~~~~~~~~~~lvGHS~Gg~i~~~~a~~~p--~~~~~l~~~v~~~p~~~~~ 61 (87)
.-+++.+..+.++++++|-|.||.+++.++..-. +....=+++++++|.....
T Consensus 184 ~Y~~Lv~~~G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 184 TYDYLVESEGNKNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLV 238 (374)
T ss_pred HHHHHHhccCCCeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCc
Confidence 3455555567889999999999999888764311 1111234788999966544
No 182
>PRK10115 protease 2; Provisional
Probab=93.80 E-value=0.098 Score=40.26 Aligned_cols=51 Identities=22% Similarity=0.303 Sum_probs=38.4
Q ss_pred ccHHHHHHHHHHH--hCCCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeeccc
Q psy5051 4 YDLPVVIDYILSV--TGQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPI 57 (87)
Q Consensus 4 ~D~~~~i~~v~~~--~~~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~ 57 (87)
.|+-+.++++.+. ...+++.+.|-|.||.++...+..+|++ .++.+...|.
T Consensus 506 ~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdl---f~A~v~~vp~ 558 (686)
T PRK10115 506 NDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPEL---FHGVIAQVPF 558 (686)
T ss_pred HHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChhh---eeEEEecCCc
Confidence 4777788887764 2357999999999999999888888984 5555555543
No 183
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=93.67 E-value=0.13 Score=33.65 Aligned_cols=42 Identities=17% Similarity=0.147 Sum_probs=30.2
Q ss_pred HHHHHhCCCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeecc
Q psy5051 12 YILSVTGQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAP 56 (87)
Q Consensus 12 ~v~~~~~~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p 56 (87)
.+++.....++.+=||||||-++.+.+..-.. .|..+++++-
T Consensus 81 ql~~~l~~gpLi~GGkSmGGR~aSmvade~~A---~i~~L~clgY 122 (213)
T COG3571 81 QLRAGLAEGPLIIGGKSMGGRVASMVADELQA---PIDGLVCLGY 122 (213)
T ss_pred HHHhcccCCceeeccccccchHHHHHHHhhcC---CcceEEEecC
Confidence 33444444589999999999999888765432 5777788773
No 184
>KOG4627|consensus
Probab=93.60 E-value=0.058 Score=36.52 Aligned_cols=50 Identities=20% Similarity=0.281 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHhC-CCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeeccc
Q psy5051 6 LPVVIDYILSVTG-QPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPI 57 (87)
Q Consensus 6 ~~~~i~~v~~~~~-~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~ 57 (87)
+..-++++++.+. .+++.+-|||.|+.+++....+. +..++.++++++..
T Consensus 121 ~~~gv~filk~~~n~k~l~~gGHSaGAHLa~qav~R~--r~prI~gl~l~~Gv 171 (270)
T KOG4627|consen 121 FTHGVNFILKYTENTKVLTFGGHSAGAHLAAQAVMRQ--RSPRIWGLILLCGV 171 (270)
T ss_pred HHHHHHHHHHhcccceeEEEcccchHHHHHHHHHHHh--cCchHHHHHHHhhH
Confidence 3345566666654 45678889999999999888763 34477777777654
No 185
>KOG4667|consensus
Probab=93.51 E-value=0.11 Score=35.37 Aligned_cols=49 Identities=24% Similarity=0.285 Sum_probs=33.1
Q ss_pred ccHHHHHHHHHHHhCCCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeeccc
Q psy5051 4 YDLPVVIDYILSVTGQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPI 57 (87)
Q Consensus 4 ~D~~~~i~~v~~~~~~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~ 57 (87)
+|+..+++++...... --.++|||-||.+++.|++.+++ +..++.++.-
T Consensus 90 dDL~sV~q~~s~~nr~-v~vi~gHSkGg~Vvl~ya~K~~d----~~~viNcsGR 138 (269)
T KOG4667|consen 90 DDLHSVIQYFSNSNRV-VPVILGHSKGGDVVLLYASKYHD----IRNVINCSGR 138 (269)
T ss_pred HHHHHHHHHhccCceE-EEEEEeecCccHHHHHHHHhhcC----chheEEcccc
Confidence 4555566665552221 23569999999999999999876 5555655543
No 186
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=93.20 E-value=0.086 Score=36.98 Aligned_cols=39 Identities=13% Similarity=0.081 Sum_probs=29.6
Q ss_pred CceeEEEEChHHHHHHHHHHhCCchhhhhhheeeeccccccc
Q psy5051 20 PKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPIAFIN 61 (87)
Q Consensus 20 ~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~~~~~ 61 (87)
+.-.+.|-|+||.++++.+..+|+...+ ++..+|.....
T Consensus 177 ~~r~L~G~SlGG~vsL~agl~~Pe~FG~---V~s~Sps~~~~ 215 (299)
T COG2382 177 DGRVLAGDSLGGLVSLYAGLRHPERFGH---VLSQSGSFWWT 215 (299)
T ss_pred CCcEEeccccccHHHHHHHhcCchhhce---eeccCCccccC
Confidence 3467899999999999999999995433 45666655444
No 187
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=93.16 E-value=0.19 Score=34.79 Aligned_cols=39 Identities=21% Similarity=0.171 Sum_probs=26.5
Q ss_pred CceeEEEEChHHHHHHHHHHhCC----chhhhhhheeeecccc
Q psy5051 20 PKLSYIGHSMGTTMFWVLLSEKP----EYNDKIEVMIGMAPIA 58 (87)
Q Consensus 20 ~~~~lvGHS~Gg~i~~~~a~~~p----~~~~~l~~~v~~~p~~ 58 (87)
.++.+.|||+||..++..+...| |+...+++.+..+|..
T Consensus 71 ~~v~l~GySqGG~Aa~~AA~l~~~YApeL~~~l~Gaa~gg~~~ 113 (290)
T PF03583_consen 71 SRVALWGYSQGGQAALWAAELAPSYAPELNRDLVGAAAGGPPA 113 (290)
T ss_pred CCEEEEeeCccHHHHHHHHHHhHHhCcccccceeEEeccCCcc
Confidence 58999999999999877665544 4422355666666543
No 188
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=92.78 E-value=0.16 Score=36.60 Aligned_cols=40 Identities=20% Similarity=0.400 Sum_probs=31.7
Q ss_pred ccHHHHHHHHHHH---------hCCCceeEEEEChHHHHHHHHHHhCCc
Q psy5051 4 YDLPVVIDYILSV---------TGQPKLSYIGHSMGTTMFWVLLSEKPE 43 (87)
Q Consensus 4 ~D~~~~i~~v~~~---------~~~~~~~lvGHS~Gg~i~~~~a~~~p~ 43 (87)
+|+..+++.+.+. ...+++-++|||.||..++..+....+
T Consensus 134 ~dis~lLd~L~~~~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~ 182 (365)
T COG4188 134 LDISALLDALLQLTASPALAGRLDPQRVGVLGHSFGGYTAMELAGAELD 182 (365)
T ss_pred ccHHHHHHHHHHhhcCcccccccCccceEEEecccccHHHHHhcccccc
Confidence 5788888888765 234689999999999999888766554
No 189
>KOG3847|consensus
Probab=92.52 E-value=0.04 Score=39.33 Aligned_cols=28 Identities=21% Similarity=0.243 Sum_probs=21.4
Q ss_pred HhCCCceeEEEEChHHHHHHHHHHhCCc
Q psy5051 16 VTGQPKLSYIGHSMGTTMFWVLLSEKPE 43 (87)
Q Consensus 16 ~~~~~~~~lvGHS~Gg~i~~~~a~~~p~ 43 (87)
.....++.++|||.||+......+.+.+
T Consensus 237 nl~~s~~aViGHSFGgAT~i~~ss~~t~ 264 (399)
T KOG3847|consen 237 NLDTSQAAVIGHSFGGATSIASSSSHTD 264 (399)
T ss_pred chhhhhhhheeccccchhhhhhhccccc
Confidence 3445679999999999998777665544
No 190
>KOG1515|consensus
Probab=92.22 E-value=0.37 Score=34.34 Aligned_cols=60 Identities=17% Similarity=0.166 Sum_probs=42.7
Q ss_pred cccHHHHHHHHHHH------hCCCceeEEEEChHHHHHHHHHHhCCc---hhhhhhheeeecccccccc
Q psy5051 3 IYDLPVVIDYILSV------TGQPKLSYIGHSMGTTMFWVLLSEKPE---YNDKIEVMIGMAPIAFINH 62 (87)
Q Consensus 3 ~~D~~~~i~~v~~~------~~~~~~~lvGHS~Gg~i~~~~a~~~p~---~~~~l~~~v~~~p~~~~~~ 62 (87)
.+|--+.+.++.+. .+..+++++|=|.||.++...+.+.-+ .--++++.+++-|......
T Consensus 143 y~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~ 211 (336)
T KOG1515|consen 143 YDDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTD 211 (336)
T ss_pred chHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCC
Confidence 45666677776653 355789999999999999888765331 1237889999999655444
No 191
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=92.22 E-value=0.11 Score=36.43 Aligned_cols=48 Identities=17% Similarity=0.323 Sum_probs=33.4
Q ss_pred cHHHHHHHHHHH--hCCCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeecc
Q psy5051 5 DLPVVIDYILSV--TGQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAP 56 (87)
Q Consensus 5 D~~~~i~~v~~~--~~~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p 56 (87)
|....++.+... ...+++.+.|-|+||.+++..++..| ++++.+..-|
T Consensus 159 D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~----rik~~~~~~P 208 (321)
T COG3458 159 DAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP----RIKAVVADYP 208 (321)
T ss_pred HHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcCh----hhhccccccc
Confidence 455555655543 34578999999999999999988776 4554454444
No 192
>KOG2541|consensus
Probab=91.79 E-value=0.56 Score=32.77 Aligned_cols=35 Identities=14% Similarity=0.196 Sum_probs=29.4
Q ss_pred CCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeec
Q psy5051 19 QPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMA 55 (87)
Q Consensus 19 ~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~ 55 (87)
.+-++++|.||||.++...+...++ ..++.+|.++
T Consensus 91 sqGynivg~SQGglv~Raliq~cd~--ppV~n~ISL~ 125 (296)
T KOG2541|consen 91 SQGYNIVGYSQGGLVARALIQFCDN--PPVKNFISLG 125 (296)
T ss_pred cCceEEEEEccccHHHHHHHHhCCC--CCcceeEecc
Confidence 3569999999999999999988776 4788888775
No 193
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=91.50 E-value=0.21 Score=36.62 Aligned_cols=51 Identities=18% Similarity=0.266 Sum_probs=35.6
Q ss_pred ccHHHHHHHHHHHhCCCceeEEEEChHHHHHHH-HHHhCCchhhhhhheeee
Q psy5051 4 YDLPVVIDYILSVTGQPKLSYIGHSMGTTMFWV-LLSEKPEYNDKIEVMIGM 54 (87)
Q Consensus 4 ~D~~~~i~~v~~~~~~~~~~lvGHS~Gg~i~~~-~a~~~p~~~~~l~~~v~~ 54 (87)
.|+..++++-.++-+..++.++|+|+|+-+.-. |...-|..+++++.+.++
T Consensus 310 ~Dl~r~i~~y~~~w~~~~~~liGySfGADvlP~~~n~L~~~~r~~v~~~~ll 361 (456)
T COG3946 310 ADLSRLIRFYARRWGAKRVLLIGYSFGADVLPFAYNRLPPATRQRVRMVSLL 361 (456)
T ss_pred HHHHHHHHHHHHhhCcceEEEEeecccchhhHHHHHhCCHHHHHHHHHHHHH
Confidence 477888888888888899999999999988433 333334444455544443
No 194
>KOG2100|consensus
Probab=91.17 E-value=0.36 Score=37.75 Aligned_cols=56 Identities=16% Similarity=0.231 Sum_probs=39.2
Q ss_pred cccHHHHHHHHH---HH--hCCCceeEEEEChHHHHHHHHHHhCCchhhhhhhe-eeeccccccc
Q psy5051 3 IYDLPVVIDYIL---SV--TGQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVM-IGMAPIAFIN 61 (87)
Q Consensus 3 ~~D~~~~i~~v~---~~--~~~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~-v~~~p~~~~~ 61 (87)
..|+.+.++.++ +. .+.+++.+.|+|-||-+.+..+...|+ ++.++ +.++|+..+.
T Consensus 586 ~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~---~~fkcgvavaPVtd~~ 647 (755)
T KOG2100|consen 586 DVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPG---DVFKCGVAVAPVTDWL 647 (755)
T ss_pred CcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcC---ceEEEEEEecceeeee
Confidence 345555554443 32 345689999999999999999988886 33333 7888876654
No 195
>KOG2565|consensus
Probab=91.06 E-value=1.1 Score=32.88 Aligned_cols=40 Identities=23% Similarity=0.115 Sum_probs=33.8
Q ss_pred HHHHHHHHHHhCCCceeEEEEChHHHHHHHHHHhCCchhh
Q psy5051 7 PVVIDYILSVTGQPKLSYIGHSMGTTMFWVLLSEKPEYND 46 (87)
Q Consensus 7 ~~~i~~v~~~~~~~~~~lvGHS~Gg~i~~~~a~~~p~~~~ 46 (87)
+.++..++-++|.+++++-|-.||+.|+...+..+|+.+.
T Consensus 216 ArvmrkLMlRLg~nkffiqGgDwGSiI~snlasLyPenV~ 255 (469)
T KOG2565|consen 216 ARVMRKLMLRLGYNKFFIQGGDWGSIIGSNLASLYPENVL 255 (469)
T ss_pred HHHHHHHHHHhCcceeEeecCchHHHHHHHHHhhcchhhh
Confidence 3455666678999999999999999999999999999543
No 196
>KOG1516|consensus
Probab=90.93 E-value=0.41 Score=35.37 Aligned_cols=53 Identities=21% Similarity=0.419 Sum_probs=35.4
Q ss_pred CcccHHHHHHHHHHHh---C--CCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeec
Q psy5051 2 GIYDLPVVIDYILSVT---G--QPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMA 55 (87)
Q Consensus 2 a~~D~~~~i~~v~~~~---~--~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~ 55 (87)
+.+|....++++.+.. | .+++.++|||.||+.+..... -|.........+.++
T Consensus 172 gl~Dq~~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~-Sp~s~~LF~~aI~~S 229 (545)
T KOG1516|consen 172 GLFDQLLALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLTL-SPHSRGLFHKAISMS 229 (545)
T ss_pred cHHHHHHHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHHhc-CHhhHHHHHHHHhhc
Confidence 4567888888887753 3 479999999999999866654 344333333344443
No 197
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=90.81 E-value=0.23 Score=34.05 Aligned_cols=23 Identities=22% Similarity=0.261 Sum_probs=18.7
Q ss_pred ceeEEEEChHHHHHHHHHHhCCc
Q psy5051 21 KLSYIGHSMGTTMFWVLLSEKPE 43 (87)
Q Consensus 21 ~~~lvGHS~Gg~i~~~~a~~~p~ 43 (87)
+++-+|||+|+.+-+...+.++.
T Consensus 91 P~~~vGHSlGcklhlLi~s~~~~ 113 (250)
T PF07082_consen 91 PVYGVGHSLGCKLHLLIGSLFDV 113 (250)
T ss_pred CeeeeecccchHHHHHHhhhccC
Confidence 67889999999998877766543
No 198
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=90.69 E-value=0.88 Score=30.54 Aligned_cols=23 Identities=17% Similarity=0.155 Sum_probs=18.9
Q ss_pred CCCceeEEEEChHHHHHHHHHHh
Q psy5051 18 GQPKLSYIGHSMGTTMFWVLLSE 40 (87)
Q Consensus 18 ~~~~~~lvGHS~Gg~i~~~~a~~ 40 (87)
..+++.++|+|||+.++...+.+
T Consensus 46 ~~~~vvV~GySQGA~Va~~~~~~ 68 (225)
T PF08237_consen 46 AGGPVVVFGYSQGAVVASNVLRR 68 (225)
T ss_pred CCCCEEEEEECHHHHHHHHHHHH
Confidence 44789999999999998776644
No 199
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=90.47 E-value=0.36 Score=35.24 Aligned_cols=41 Identities=17% Similarity=0.101 Sum_probs=29.9
Q ss_pred ccHHHHHHHHHHHhC----CCceeEEEEChHHHHHHHHHHhCCch
Q psy5051 4 YDLPVVIDYILSVTG----QPKLSYIGHSMGTTMFWVLLSEKPEY 44 (87)
Q Consensus 4 ~D~~~~i~~v~~~~~----~~~~~lvGHS~Gg~i~~~~a~~~p~~ 44 (87)
-|.=..+.++.+..+ .-+++++|+|-||.++...+.-.|..
T Consensus 164 iD~INAl~~l~k~~~~~~~~lp~I~~G~s~G~yla~l~~k~aP~~ 208 (403)
T PF11144_consen 164 IDIINALLDLKKIFPKNGGGLPKIYIGSSHGGYLAHLCAKIAPWL 208 (403)
T ss_pred HHHHHHHHHHHHhhhcccCCCcEEEEecCcHHHHHHHHHhhCccc
Confidence 344455555555432 24899999999999999998888874
No 200
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=90.00 E-value=0.45 Score=35.27 Aligned_cols=39 Identities=18% Similarity=0.150 Sum_probs=33.5
Q ss_pred CCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeecccccc
Q psy5051 19 QPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPIAFI 60 (87)
Q Consensus 19 ~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~~~~ 60 (87)
.+.-+..|.|.||..++..+.++|+ ...+++.-+|...+
T Consensus 114 p~~sY~~GcS~GGRqgl~~AQryP~---dfDGIlAgaPA~~~ 152 (474)
T PF07519_consen 114 PKYSYFSGCSTGGRQGLMAAQRYPE---DFDGILAGAPAINW 152 (474)
T ss_pred CCceEEEEeCCCcchHHHHHHhChh---hcCeEEeCCchHHH
Confidence 4578899999999999999999998 67778888887654
No 201
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=89.57 E-value=0.41 Score=31.67 Aligned_cols=42 Identities=17% Similarity=0.119 Sum_probs=31.0
Q ss_pred HHHHHHHHhCCCceeEEEEChHHHHHHHHHHhCCchhhhhhh
Q psy5051 9 VIDYILSVTGQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEV 50 (87)
Q Consensus 9 ~i~~v~~~~~~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~ 50 (87)
.-.+++++.-......-|.|||+..+..+.-++|+...++.+
T Consensus 90 yerYv~eEalpgs~~~sgcsmGayhA~nfvfrhP~lftkvia 131 (227)
T COG4947 90 YERYVIEEALPGSTIVSGCSMGAYHAANFVFRHPHLFTKVIA 131 (227)
T ss_pred HHHHHHHhhcCCCccccccchhhhhhhhhheeChhHhhhhee
Confidence 344555543334577799999999999999999997666643
No 202
>COG3150 Predicted esterase [General function prediction only]
Probab=87.89 E-value=1.5 Score=28.83 Aligned_cols=35 Identities=14% Similarity=-0.015 Sum_probs=28.1
Q ss_pred HHHHHHHHHHhCCCceeEEEEChHHHHHHHHHHhC
Q psy5051 7 PVVIDYILSVTGQPKLSYIGHSMGTTMFWVLLSEK 41 (87)
Q Consensus 7 ~~~i~~v~~~~~~~~~~lvGHS~Gg~i~~~~a~~~ 41 (87)
.+.++.+.+..+.+..-++|-|+||.-+.+.+.++
T Consensus 46 ~~ele~~i~~~~~~~p~ivGssLGGY~At~l~~~~ 80 (191)
T COG3150 46 LKELEKAVQELGDESPLIVGSSLGGYYATWLGFLC 80 (191)
T ss_pred HHHHHHHHHHcCCCCceEEeecchHHHHHHHHHHh
Confidence 34566667777877899999999999998887665
No 203
>KOG3967|consensus
Probab=87.76 E-value=0.9 Score=31.08 Aligned_cols=38 Identities=13% Similarity=0.190 Sum_probs=30.4
Q ss_pred hCCCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeec
Q psy5051 17 TGQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMA 55 (87)
Q Consensus 17 ~~~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~ 55 (87)
...+.++++.||-||...+....++|+. +++.++.+..
T Consensus 187 a~~~sv~vvahsyGG~~t~~l~~~f~~d-~~v~aialTD 224 (297)
T KOG3967|consen 187 AKAESVFVVAHSYGGSLTLDLVERFPDD-ESVFAIALTD 224 (297)
T ss_pred cCcceEEEEEeccCChhHHHHHHhcCCc-cceEEEEeec
Confidence 4467899999999999999999999875 5666555553
No 204
>KOG3043|consensus
Probab=86.86 E-value=0.2 Score=34.06 Aligned_cols=41 Identities=20% Similarity=0.403 Sum_probs=32.9
Q ss_pred cccHHHHHHHHHHHhCCCceeEEEEChHHHHHHHHHHhCCc
Q psy5051 3 IYDLPVVIDYILSVTGQPKLSYIGHSMGTTMFWVLLSEKPE 43 (87)
Q Consensus 3 ~~D~~~~i~~v~~~~~~~~~~lvGHS~Gg~i~~~~a~~~p~ 43 (87)
..|+.+.+++++.+-..+++-++|.+|||.++..+.+..|+
T Consensus 103 ~~~i~~v~k~lk~~g~~kkIGv~GfCwGak~vv~~~~~~~~ 143 (242)
T KOG3043|consen 103 WKDITAVVKWLKNHGDSKKIGVVGFCWGAKVVVTLSAKDPE 143 (242)
T ss_pred hhHHHHHHHHHHHcCCcceeeEEEEeecceEEEEeeccchh
Confidence 35778888888866657899999999999998777666653
No 205
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=84.77 E-value=2.1 Score=33.25 Aligned_cols=49 Identities=18% Similarity=0.308 Sum_probs=34.9
Q ss_pred cHHHHHHHHHHH--hCCCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeecc
Q psy5051 5 DLPVVIDYILSV--TGQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAP 56 (87)
Q Consensus 5 D~~~~i~~v~~~--~~~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p 56 (87)
|+-+..+++.+. ...+.+..+|-|.||+++-..+-..|+. .+++++--|
T Consensus 510 DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~l---f~~iiA~VP 560 (682)
T COG1770 510 DFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPDL---FAGIIAQVP 560 (682)
T ss_pred HHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhChhh---hhheeecCC
Confidence 555666666553 3346899999999999998888888984 444454444
No 206
>KOG2281|consensus
Probab=84.75 E-value=1.3 Score=34.67 Aligned_cols=51 Identities=22% Similarity=0.268 Sum_probs=36.6
Q ss_pred HHHHHHHHHhC---CCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeeccccccc
Q psy5051 8 VVIDYILSVTG---QPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPIAFIN 61 (87)
Q Consensus 8 ~~i~~v~~~~~---~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~~~~~ 61 (87)
.-++.+.++.| .+++.+-|+|-||.++++..+.+|+. .+..|.-+|+..+.
T Consensus 712 eglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~I---frvAIAGapVT~W~ 765 (867)
T KOG2281|consen 712 EGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPNI---FRVAIAGAPVTDWR 765 (867)
T ss_pred HHHHHHHHhcCcccchheeEeccccccHHHHHHhhcCcce---eeEEeccCcceeee
Confidence 33445556554 57899999999999999999999983 44445556655433
No 207
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=83.72 E-value=2.8 Score=28.57 Aligned_cols=27 Identities=19% Similarity=0.007 Sum_probs=21.1
Q ss_pred HHHhCCCceeEEEEChHHHHHHHHHHh
Q psy5051 14 LSVTGQPKLSYIGHSMGTTMFWVLLSE 40 (87)
Q Consensus 14 ~~~~~~~~~~lvGHS~Gg~i~~~~a~~ 40 (87)
.+..+.++-.++|||+|=..++..+..
T Consensus 70 l~~~g~~P~~v~GhS~GE~aAa~~aG~ 96 (295)
T TIGR03131 70 LLALLPRPSAVAGYSVGEYAAAVVAGV 96 (295)
T ss_pred HHhcCCCCcEEeecCHHHHHHHHHhCC
Confidence 345677899999999999888776643
No 208
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=83.65 E-value=2.8 Score=28.42 Aligned_cols=27 Identities=19% Similarity=0.153 Sum_probs=21.3
Q ss_pred HHHhCCCceeEEEEChHHHHHHHHHHh
Q psy5051 14 LSVTGQPKLSYIGHSMGTTMFWVLLSE 40 (87)
Q Consensus 14 ~~~~~~~~~~lvGHS~Gg~i~~~~a~~ 40 (87)
++..|.++-.++|||+|-..++..+..
T Consensus 76 l~~~Gi~p~~~~GhSlGE~aA~~~ag~ 102 (298)
T smart00827 76 WRSWGVRPDAVVGHSLGEIAAAYVAGV 102 (298)
T ss_pred HHHcCCcccEEEecCHHHHHHHHHhCC
Confidence 355678888999999999888776643
No 209
>KOG2029|consensus
Probab=82.85 E-value=1.2 Score=34.35 Aligned_cols=37 Identities=32% Similarity=0.501 Sum_probs=23.9
Q ss_pred CCceeEEEEChHHHHHHHHH-----HhCCchh---hhhhheeeec
Q psy5051 19 QPKLSYIGHSMGTTMFWVLL-----SEKPEYN---DKIEVMIGMA 55 (87)
Q Consensus 19 ~~~~~lvGHS~Gg~i~~~~a-----~~~p~~~---~~l~~~v~~~ 55 (87)
..++.++||||||..+-... +..|+.. +.-++++.++
T Consensus 525 ~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls 569 (697)
T KOG2029|consen 525 DRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLS 569 (697)
T ss_pred CCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEe
Confidence 56899999999998854433 2456543 2334566555
No 210
>KOG4372|consensus
Probab=82.28 E-value=0.53 Score=34.37 Aligned_cols=18 Identities=33% Similarity=0.601 Sum_probs=15.3
Q ss_pred CCceeEEEEChHHHHHHH
Q psy5051 19 QPKLSYIGHSMGTTMFWV 36 (87)
Q Consensus 19 ~~~~~lvGHS~Gg~i~~~ 36 (87)
.+++..+|||+||.++..
T Consensus 149 i~kISfvghSLGGLvar~ 166 (405)
T KOG4372|consen 149 IEKISFVGHSLGGLVARY 166 (405)
T ss_pred cceeeeeeeecCCeeeeE
Confidence 579999999999988543
No 211
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=82.26 E-value=3.2 Score=27.98 Aligned_cols=26 Identities=23% Similarity=0.148 Sum_probs=20.4
Q ss_pred HHhC-CCceeEEEEChHHHHHHHHHHh
Q psy5051 15 SVTG-QPKLSYIGHSMGTTMFWVLLSE 40 (87)
Q Consensus 15 ~~~~-~~~~~lvGHS~Gg~i~~~~a~~ 40 (87)
+..+ .++-.++|||+|=..++..+..
T Consensus 77 ~~~g~i~p~~v~GhS~GE~aAa~~aG~ 103 (290)
T TIGR00128 77 KEQGGLKPDFAAGHSLGEYSALVAAGA 103 (290)
T ss_pred HHcCCCCCCEEeecCHHHHHHHHHhCC
Confidence 3455 7889999999999888777644
No 212
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=81.82 E-value=1.9 Score=29.83 Aligned_cols=28 Identities=29% Similarity=0.305 Sum_probs=21.9
Q ss_pred HHHHhCCCceeEEEEChHHHHHHHHHHh
Q psy5051 13 ILSVTGQPKLSYIGHSMGTTMFWVLLSE 40 (87)
Q Consensus 13 v~~~~~~~~~~lvGHS~Gg~i~~~~a~~ 40 (87)
.++..|.++-.++|||+|=..++..+..
T Consensus 77 ~l~~~Gi~P~~v~GhSlGE~aA~~aaG~ 104 (318)
T PF00698_consen 77 LLRSWGIKPDAVIGHSLGEYAALVAAGA 104 (318)
T ss_dssp HHHHTTHCESEEEESTTHHHHHHHHTTS
T ss_pred hhcccccccceeeccchhhHHHHHHCCc
Confidence 3456788899999999999888766543
No 213
>KOG2112|consensus
Probab=76.95 E-value=2.9 Score=27.95 Aligned_cols=26 Identities=15% Similarity=0.157 Sum_probs=22.6
Q ss_pred CCCceeEEEEChHHHHHHHHHHhCCc
Q psy5051 18 GQPKLSYIGHSMGTTMFWVLLSEKPE 43 (87)
Q Consensus 18 ~~~~~~lvGHS~Gg~i~~~~a~~~p~ 43 (87)
+..++.+-|.||||.++++.+.++|.
T Consensus 91 ~~~rI~igGfs~G~a~aL~~~~~~~~ 116 (206)
T KOG2112|consen 91 PSNRIGIGGFSQGGALALYSALTYPK 116 (206)
T ss_pred CccceeEcccCchHHHHHHHHhcccc
Confidence 34678999999999999999998865
No 214
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=75.09 E-value=5.7 Score=30.19 Aligned_cols=27 Identities=19% Similarity=0.142 Sum_probs=22.3
Q ss_pred HHhCCCceeEEEEChHHHHHHHHHHhC
Q psy5051 15 SVTGQPKLSYIGHSMGTTMFWVLLSEK 41 (87)
Q Consensus 15 ~~~~~~~~~lvGHS~Gg~i~~~~a~~~ 41 (87)
+..|.++-.++|||+|=..++..+.-.
T Consensus 260 ~~~GI~Pdav~GHSlGE~aAa~aAGvl 286 (538)
T TIGR02816 260 DEFAIKPDFALGYSKGEASMWASLGVW 286 (538)
T ss_pred HhcCCCCCEEeecCHHHHHHHHHhCCC
Confidence 467888999999999998888777544
No 215
>KOG2385|consensus
Probab=72.72 E-value=4.3 Score=31.01 Aligned_cols=43 Identities=21% Similarity=0.288 Sum_probs=29.0
Q ss_pred HhCCCceeEEEEChHHHHHHHHHHhCC--chhhhhhheeeecccc
Q psy5051 16 VTGQPKLSYIGHSMGTTMFWVLLSEKP--EYNDKIEVMIGMAPIA 58 (87)
Q Consensus 16 ~~~~~~~~lvGHS~Gg~i~~~~a~~~p--~~~~~l~~~v~~~p~~ 58 (87)
..|.+++.++|.|+|+-+.+....+-- +-+.-|..+++++.+.
T Consensus 443 ~qG~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv 487 (633)
T KOG2385|consen 443 SQGNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPV 487 (633)
T ss_pred ccCCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCc
Confidence 467899999999999999886554321 2223455667776443
No 216
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=72.58 E-value=6 Score=26.52 Aligned_cols=25 Identities=20% Similarity=0.195 Sum_probs=19.9
Q ss_pred hCCCceeEEEEChHHHHHHHHHHhC
Q psy5051 17 TGQPKLSYIGHSMGTTMFWVLLSEK 41 (87)
Q Consensus 17 ~~~~~~~lvGHS~Gg~i~~~~a~~~ 41 (87)
.+.+++++|+.|||-.++..+....
T Consensus 54 ~~y~~i~lvAWSmGVw~A~~~l~~~ 78 (213)
T PF04301_consen 54 SGYREIYLVAWSMGVWAANRVLQGI 78 (213)
T ss_pred ccCceEEEEEEeHHHHHHHHHhccC
Confidence 4568999999999999887765443
No 217
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=71.65 E-value=8.3 Score=29.10 Aligned_cols=68 Identities=15% Similarity=0.113 Sum_probs=43.7
Q ss_pred cccHHHHHHHHHHHhC-----CCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeecccccccc-CChHHHHH
Q psy5051 3 IYDLPVVIDYILSVTG-----QPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPIAFINH-VKSPVIRF 70 (87)
Q Consensus 3 ~~D~~~~i~~v~~~~~-----~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~~~~~~-~~~~~~~~ 70 (87)
..|+..+.+.+.+.+. ..+.+++|-|-||.-+..+|..-.+....++..+.+++...... ..+|+...
T Consensus 176 ~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssvligng~~t~Pl~~~ 249 (498)
T COG2939 176 GKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSVLIGNGLWTDPLTQY 249 (498)
T ss_pred chhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeeeeeecCCcccChhHHH
Confidence 4567777776665431 25899999999999887777543221123566777777665554 55665444
No 218
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=71.17 E-value=3.2 Score=27.78 Aligned_cols=17 Identities=24% Similarity=0.481 Sum_probs=13.9
Q ss_pred CCCceeEEEEChHHHHH
Q psy5051 18 GQPKLSYIGHSMGTTMF 34 (87)
Q Consensus 18 ~~~~~~lvGHS~Gg~i~ 34 (87)
....+++.|||+|.+=-
T Consensus 233 ~i~~I~i~GhSl~~~D~ 249 (270)
T PF14253_consen 233 DIDEIIIYGHSLGEVDY 249 (270)
T ss_pred CCCEEEEEeCCCchhhH
Confidence 46789999999998643
No 219
>KOG2237|consensus
Probab=70.82 E-value=4.3 Score=31.65 Aligned_cols=44 Identities=20% Similarity=0.332 Sum_probs=34.3
Q ss_pred ccHHHHHHHHHHH--hCCCceeEEEEChHHHHHHHHHHhCCchhhh
Q psy5051 4 YDLPVVIDYILSV--TGQPKLSYIGHSMGTTMFWVLLSEKPEYNDK 47 (87)
Q Consensus 4 ~D~~~~i~~v~~~--~~~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~ 47 (87)
.|+-+.++++.+. ....++.+.|.|.||.++....-.+|++...
T Consensus 531 ~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~rPdLF~a 576 (712)
T KOG2237|consen 531 DDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQRPDLFGA 576 (712)
T ss_pred HHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhccCchHhhh
Confidence 4677777777663 3457899999999999998888889986443
No 220
>PF03283 PAE: Pectinacetylesterase
Probab=70.49 E-value=6.7 Score=28.20 Aligned_cols=35 Identities=23% Similarity=0.131 Sum_probs=27.3
Q ss_pred ccHHHHHHHHHHH-h-CCCceeEEEEChHHHHHHHHH
Q psy5051 4 YDLPVVIDYILSV-T-GQPKLSYIGHSMGTTMFWVLL 38 (87)
Q Consensus 4 ~D~~~~i~~v~~~-~-~~~~~~lvGHS~Gg~i~~~~a 38 (87)
..+.++++++++. + ..+++.+.|.|.||.-++..+
T Consensus 138 ~i~~avl~~l~~~gl~~a~~vlltG~SAGG~g~~~~~ 174 (361)
T PF03283_consen 138 RILRAVLDDLLSNGLPNAKQVLLTGCSAGGLGAILHA 174 (361)
T ss_pred HHHHHHHHHHHHhcCcccceEEEeccChHHHHHHHHH
Confidence 3567788888876 3 357999999999998876654
No 221
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=69.58 E-value=7.8 Score=27.37 Aligned_cols=22 Identities=23% Similarity=0.170 Sum_probs=18.4
Q ss_pred CCCceeEEEEChHHHHHHHHHH
Q psy5051 18 GQPKLSYIGHSMGTTMFWVLLS 39 (87)
Q Consensus 18 ~~~~~~lvGHS~Gg~i~~~~a~ 39 (87)
+.++.++.|||+|=..++..+.
T Consensus 83 ~~~p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 83 GVKPDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred CCCCceeecccHhHHHHHHHcc
Confidence 4778899999999988877665
No 222
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=68.59 E-value=5.4 Score=28.01 Aligned_cols=39 Identities=21% Similarity=0.259 Sum_probs=30.4
Q ss_pred CceeEEEEChHHHHHHHHHHhCCchhhhhhheeeecccc
Q psy5051 20 PKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPIA 58 (87)
Q Consensus 20 ~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~~ 58 (87)
.|+++.|-|+|+.-+-......++..+.+.+.+..+|..
T Consensus 109 PkL~l~GeSLGa~g~~~af~~~~~~~~~vdGalw~GpP~ 147 (289)
T PF10081_consen 109 PKLYLYGESLGAYGGEAAFDGLDDLRDRVDGALWVGPPF 147 (289)
T ss_pred CeEEEeccCccccchhhhhccHHHhhhhcceEEEeCCCC
Confidence 489999999999887666655566667788888888754
No 223
>PRK10279 hypothetical protein; Provisional
Probab=67.90 E-value=11 Score=26.42 Aligned_cols=29 Identities=17% Similarity=0.100 Sum_probs=23.8
Q ss_pred HHHhCCCceeEEEEChHHHHHHHHHHhCC
Q psy5051 14 LSVTGQPKLSYIGHSMGTTMFWVLLSEKP 42 (87)
Q Consensus 14 ~~~~~~~~~~lvGHS~Gg~i~~~~a~~~p 42 (87)
+++.+.+.-.+.|-|+|+.++..|++...
T Consensus 27 L~E~gi~~d~i~GtS~GAlvga~yA~g~~ 55 (300)
T PRK10279 27 LKKVGIEIDIVAGCSIGSLVGAAYACDRL 55 (300)
T ss_pred HHHcCCCcCEEEEEcHHHHHHHHHHcCCh
Confidence 44567777788999999999999998754
No 224
>cd00382 beta_CA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=67.49 E-value=7.7 Score=23.33 Aligned_cols=30 Identities=20% Similarity=0.343 Sum_probs=25.3
Q ss_pred cHHHHHHHHHHHhCCCceeEEEEChHHHHH
Q psy5051 5 DLPVVIDYILSVTGQPKLSYIGHSMGTTMF 34 (87)
Q Consensus 5 D~~~~i~~v~~~~~~~~~~lvGHS~Gg~i~ 34 (87)
+..+.+++....++.+.+.++||+--|++.
T Consensus 44 ~~~~sl~~av~~l~v~~ivV~gHt~CG~v~ 73 (119)
T cd00382 44 DVLASLEYAVEVLGVKHIIVCGHTDCGAVK 73 (119)
T ss_pred cHHHHHHHHHHhhCCCEEEEEccCCCcHHH
Confidence 566778888889999999999998877765
No 225
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=64.09 E-value=15 Score=25.78 Aligned_cols=29 Identities=24% Similarity=0.213 Sum_probs=22.7
Q ss_pred HHHhCCCceeEEEEChHHHHHHHHHHhCC
Q psy5051 14 LSVTGQPKLSYIGHSMGTTMFWVLLSEKP 42 (87)
Q Consensus 14 ~~~~~~~~~~lvGHS~Gg~i~~~~a~~~p 42 (87)
+++.+...=.++|-|+|+.++..|++.++
T Consensus 37 Lee~gi~~d~v~GtSaGAi~ga~ya~g~~ 65 (306)
T cd07225 37 LEEAGIPVDMVGGTSIGAFIGALYAEERN 65 (306)
T ss_pred HHHcCCCCCEEEEECHHHHHHHHHHcCCC
Confidence 34456666677999999999999998753
No 226
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=63.69 E-value=11 Score=28.54 Aligned_cols=37 Identities=30% Similarity=0.205 Sum_probs=27.7
Q ss_pred HHHHHHHHHHhCC--CceeEEEEChHHHHHHHHHHh-CCc
Q psy5051 7 PVVIDYILSVTGQ--PKLSYIGHSMGTTMFWVLLSE-KPE 43 (87)
Q Consensus 7 ~~~i~~v~~~~~~--~~~~lvGHS~Gg~i~~~~a~~-~p~ 43 (87)
...|+..++.++. +++++-|-|||+-=|+.|++. .|+
T Consensus 342 ~~~I~~~L~~LgF~~~qLILSGlSMGTfgAlYYga~l~P~ 381 (511)
T TIGR03712 342 INVIQEKLDYLGFDHDQLILSGLSMGTFGALYYGAKLSPH 381 (511)
T ss_pred HHHHHHHHHHhCCCHHHeeeccccccchhhhhhcccCCCc
Confidence 3455555666664 589999999999999999876 344
No 227
>cd00883 beta_CA_cladeA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=63.67 E-value=12 Score=24.24 Aligned_cols=33 Identities=18% Similarity=0.142 Sum_probs=27.4
Q ss_pred cHHHHHHHHHHHhCCCceeEEEEChHHHHHHHH
Q psy5051 5 DLPVVIDYILSVTGQPKLSYIGHSMGTTMFWVL 37 (87)
Q Consensus 5 D~~~~i~~v~~~~~~~~~~lvGHS~Gg~i~~~~ 37 (87)
+..+.+++....++.+.+.++|||-=|++....
T Consensus 66 ~~~asleyAv~~L~v~~IvV~GHs~CGav~a~~ 98 (182)
T cd00883 66 NCLSVLQYAVDVLKVKHIIVCGHYGCGGVKAAL 98 (182)
T ss_pred chhhhHHHHHHhcCCCEEEEecCCCchHHHHHH
Confidence 366788898999999999999999988776544
No 228
>COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain [Signal transduction mechanisms]
Probab=63.66 E-value=33 Score=26.76 Aligned_cols=36 Identities=17% Similarity=0.302 Sum_probs=26.3
Q ss_pred CCceeEEEE------ChHHHHHHHHHHhCCchhhhhhheeeecccc
Q psy5051 19 QPKLSYIGH------SMGTTMFWVLLSEKPEYNDKIEVMIGMAPIA 58 (87)
Q Consensus 19 ~~~~~lvGH------S~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~~ 58 (87)
.++++++|| +.|+++++...+..-. + .+.+.+.|..
T Consensus 337 ~d~VfImGHk~pDmDalGsAig~~~~A~~~~---~-~a~~v~dp~~ 378 (655)
T COG3887 337 SDNVFIMGHKFPDMDALGSAIGMQKFASMNN---K-EAFAVLDPED 378 (655)
T ss_pred cCcEEEEccCCCChHHHHHHHHHHHHHHhcc---c-ccEEEECccc
Confidence 689999999 7999999987776533 2 3455666643
No 229
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=63.59 E-value=17 Score=22.76 Aligned_cols=29 Identities=21% Similarity=0.091 Sum_probs=23.3
Q ss_pred HHhCCCceeEEEEChHHHHHHHHHHhCCc
Q psy5051 15 SVTGQPKLSYIGHSMGTTMFWVLLSEKPE 43 (87)
Q Consensus 15 ~~~~~~~~~lvGHS~Gg~i~~~~a~~~p~ 43 (87)
++.+...-.+.|=|.|+.++..+++..+.
T Consensus 21 ~e~gi~~d~v~GtSaGAi~aa~~a~g~~~ 49 (172)
T cd07198 21 RERGPLIDIIAGTSAGAIVAALLASGRDL 49 (172)
T ss_pred HHcCCCCCEEEEECHHHHHHHHHHcCCCH
Confidence 34566677889999999999999987653
No 230
>PRK15219 carbonic anhydrase; Provisional
Probab=56.76 E-value=27 Score=23.87 Aligned_cols=34 Identities=18% Similarity=0.254 Sum_probs=28.2
Q ss_pred ccHHHHHHHHHHHhCCCceeEEEEChHHHHHHHH
Q psy5051 4 YDLPVVIDYILSVTGQPKLSYIGHSMGTTMFWVL 37 (87)
Q Consensus 4 ~D~~~~i~~v~~~~~~~~~~lvGHS~Gg~i~~~~ 37 (87)
.|+-..+++....++.+.+.++|||-=|.+...+
T Consensus 127 ~~~~~slEyAv~~L~v~~IvVlGHt~CGav~Aa~ 160 (245)
T PRK15219 127 DDLLGSMEFACAVAGAKVVLVMGHTACGAVKGAI 160 (245)
T ss_pred cchhhHHHHHHHHcCCCEEEEecCCcchHHHHHH
Confidence 4667788999999999999999999877776444
No 231
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=55.84 E-value=25 Score=24.28 Aligned_cols=30 Identities=20% Similarity=0.165 Sum_probs=24.6
Q ss_pred HHHHhCCCceeEEEEChHHHHHHHHHHhCC
Q psy5051 13 ILSVTGQPKLSYIGHSMGTTMFWVLLSEKP 42 (87)
Q Consensus 13 v~~~~~~~~~~lvGHS~Gg~i~~~~a~~~p 42 (87)
.+++.+.+.-.+.|-|+|+.++..+++.+.
T Consensus 32 aL~e~gi~~~~iaGtS~GAiva~l~A~g~~ 61 (306)
T COG1752 32 ALEEAGIPIDVIAGTSAGAIVAALYAAGMD 61 (306)
T ss_pred HHHHcCCCccEEEecCHHHHHHHHHHcCCC
Confidence 355677788889999999999999998643
No 232
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=55.11 E-value=26 Score=24.17 Aligned_cols=28 Identities=25% Similarity=0.215 Sum_probs=22.3
Q ss_pred HHHhCCCceeEEEEChHHHHHHHHHHhC
Q psy5051 14 LSVTGQPKLSYIGHSMGTTMFWVLLSEK 41 (87)
Q Consensus 14 ~~~~~~~~~~lvGHS~Gg~i~~~~a~~~ 41 (87)
+++.+..-=.+.|-|+|+.++..|++..
T Consensus 32 LeE~gi~~d~v~GtSaGAiiga~ya~g~ 59 (269)
T cd07227 32 LEEAGIPIDAIGGTSIGSFVGGLYAREA 59 (269)
T ss_pred HHHcCCCccEEEEECHHHHHHHHHHcCC
Confidence 4556666667799999999999999863
No 233
>KOG1551|consensus
Probab=54.66 E-value=9.2 Score=27.14 Aligned_cols=27 Identities=26% Similarity=0.309 Sum_probs=22.9
Q ss_pred hCCCceeEEEEChHHHHHHHHHHhCCc
Q psy5051 17 TGQPKLSYIGHSMGTTMFWVLLSEKPE 43 (87)
Q Consensus 17 ~~~~~~~lvGHS~Gg~i~~~~a~~~p~ 43 (87)
.+..++.++|-||||.++-..-+.+|.
T Consensus 192 ~g~g~~~~~g~Smgg~~a~~vgS~~q~ 218 (371)
T KOG1551|consen 192 DGLGNLNLVGRSMGGDIANQVGSLHQK 218 (371)
T ss_pred cCcccceeeeeecccHHHHhhcccCCC
Confidence 456799999999999999888887665
No 234
>PLN00416 carbonate dehydratase
Probab=54.59 E-value=22 Score=24.51 Aligned_cols=33 Identities=15% Similarity=0.220 Sum_probs=27.1
Q ss_pred cHHHHHHHHHHHhCCCceeEEEEChHHHHHHHH
Q psy5051 5 DLPVVIDYILSVTGQPKLSYIGHSMGTTMFWVL 37 (87)
Q Consensus 5 D~~~~i~~v~~~~~~~~~~lvGHS~Gg~i~~~~ 37 (87)
+..+.+++....++.+.+.++|||.=|.+....
T Consensus 125 ~~~asLEyAv~~L~V~~IVV~GHs~CGaV~Aa~ 157 (258)
T PLN00416 125 GVGAAVEYAVVHLKVENILVIGHSCCGGIKGLM 157 (258)
T ss_pred cchhHHHHHHHHhCCCEEEEecCCCchHHHHHH
Confidence 355678999999999999999999877775444
No 235
>PRK08671 methionine aminopeptidase; Provisional
Probab=53.77 E-value=8.5 Score=26.61 Aligned_cols=28 Identities=18% Similarity=0.300 Sum_probs=21.8
Q ss_pred ccHHHHHHHHHHHhCCCce-eEEEEChHH
Q psy5051 4 YDLPVVIDYILSVTGQPKL-SYIGHSMGT 31 (87)
Q Consensus 4 ~D~~~~i~~v~~~~~~~~~-~lvGHS~Gg 31 (87)
.|+.+.++.+.+..+..++ ++.||++|=
T Consensus 128 ~dv~~~i~~vi~~~G~~~~~~~~GHgiG~ 156 (291)
T PRK08671 128 GEIGRVIEETIRSYGFKPIRNLTGHGLER 156 (291)
T ss_pred HHHHHHHHHHHHHcCCcccCCCcccCcCC
Confidence 4777888888888877553 689999983
No 236
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=53.64 E-value=29 Score=22.72 Aligned_cols=27 Identities=19% Similarity=0.146 Sum_probs=21.9
Q ss_pred HhCCCceeEEEEChHHHHHHHHHHhCC
Q psy5051 16 VTGQPKLSYIGHSMGTTMFWVLLSEKP 42 (87)
Q Consensus 16 ~~~~~~~~lvGHS~Gg~i~~~~a~~~p 42 (87)
+.+...=.+.|-|.|+.++..+++..+
T Consensus 22 e~g~~~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 22 EAGIEPDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred HcCCCCCEEEEECHHHHHHHHHHcCCc
Confidence 345555678999999999999998775
No 237
>PLN02752 [acyl-carrier protein] S-malonyltransferase
Probab=53.52 E-value=12 Score=26.33 Aligned_cols=18 Identities=22% Similarity=0.243 Sum_probs=14.4
Q ss_pred eEEEEChHHHHHHHHHHh
Q psy5051 23 SYIGHSMGTTMFWVLLSE 40 (87)
Q Consensus 23 ~lvGHS~Gg~i~~~~a~~ 40 (87)
.++|||+|=..++..+..
T Consensus 127 ~~~GHSlGE~aA~~~AG~ 144 (343)
T PLN02752 127 VCAGLSLGEYTALVFAGA 144 (343)
T ss_pred eeeeccHHHHHHHHHhCC
Confidence 579999999888776643
No 238
>cd03379 beta_CA_cladeD Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=53.26 E-value=22 Score=21.91 Aligned_cols=30 Identities=13% Similarity=0.070 Sum_probs=22.3
Q ss_pred cHHHHHHHHHHHhCCCceeEEEEChHHHHH
Q psy5051 5 DLPVVIDYILSVTGQPKLSYIGHSMGTTMF 34 (87)
Q Consensus 5 D~~~~i~~v~~~~~~~~~~lvGHS~Gg~i~ 34 (87)
|.-.-+++....++.+.+.++||+-=|++.
T Consensus 41 ~~~~sl~~av~~l~~~~IiV~gHt~Cg~~~ 70 (142)
T cd03379 41 DAIRSLVVSVYLLGTREIIVIHHTDCGMLT 70 (142)
T ss_pred hHHHHHHHHHHHhCCCEEEEEeecCCcceE
Confidence 444556677788899999999998655543
No 239
>cd00884 beta_CA_cladeB Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=52.93 E-value=22 Score=23.22 Aligned_cols=33 Identities=21% Similarity=0.225 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHhCCCceeEEEEChHHHHHHHHH
Q psy5051 6 LPVVIDYILSVTGQPKLSYIGHSMGTTMFWVLL 38 (87)
Q Consensus 6 ~~~~i~~v~~~~~~~~~~lvGHS~Gg~i~~~~a 38 (87)
..+.+++....++.+.+.++|||-=|.+...+.
T Consensus 73 ~~asleyav~~l~v~~ivV~GH~~Cgav~Aa~~ 105 (190)
T cd00884 73 TSAAIEYAVAVLKVEHIVVCGHSDCGGIRALLS 105 (190)
T ss_pred hhhhHHHHHHHhCCCEEEEeCCCcchHHHHHhc
Confidence 567889999999999999999998777765443
No 240
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=52.93 E-value=33 Score=22.71 Aligned_cols=27 Identities=19% Similarity=0.080 Sum_probs=21.7
Q ss_pred HhCCCceeEEEEChHHHHHHHHHHhCC
Q psy5051 16 VTGQPKLSYIGHSMGTTMFWVLLSEKP 42 (87)
Q Consensus 16 ~~~~~~~~lvGHS~Gg~i~~~~a~~~p 42 (87)
+.+.+.-.+.|=|.|+.++..+++..+
T Consensus 24 e~gi~~~~i~GtSaGAi~aa~~a~g~~ 50 (221)
T cd07210 24 EMGLEPSAISGTSAGALVGGLFASGIS 50 (221)
T ss_pred HcCCCceEEEEeCHHHHHHHHHHcCCC
Confidence 345666678999999999999987654
No 241
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=51.76 E-value=35 Score=23.90 Aligned_cols=20 Identities=30% Similarity=0.310 Sum_probs=16.7
Q ss_pred eEEEEChHHHHHHHHHHhCC
Q psy5051 23 SYIGHSMGTTMFWVLLSEKP 42 (87)
Q Consensus 23 ~lvGHS~Gg~i~~~~a~~~p 42 (87)
.+.|-|.||.++..++..++
T Consensus 35 ~i~GTStGgiIA~~la~g~s 54 (312)
T cd07212 35 WIAGTSTGGILALALLHGKS 54 (312)
T ss_pred EEEeeChHHHHHHHHHcCCC
Confidence 45899999999999987544
No 242
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=51.60 E-value=32 Score=26.49 Aligned_cols=49 Identities=10% Similarity=0.075 Sum_probs=37.1
Q ss_pred ccHHHHHHHHHHHh-CCCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeec
Q psy5051 4 YDLPVVIDYILSVT-GQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMA 55 (87)
Q Consensus 4 ~D~~~~i~~v~~~~-~~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~ 55 (87)
.|-.+.|+++.+.. ...++-.+|-|.+|...++.|+.+|- .++.++-..
T Consensus 107 ~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pP---aLkai~p~~ 156 (563)
T COG2936 107 EDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPP---ALKAIAPTE 156 (563)
T ss_pred cchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCc---hheeecccc
Confidence 46677888887642 34689999999999999999998876 566555433
No 243
>KOG2182|consensus
Probab=51.52 E-value=33 Score=26.08 Aligned_cols=50 Identities=16% Similarity=0.085 Sum_probs=37.9
Q ss_pred CcccHHHHHHHHHHHhCC---CceeEEEEChHHHHHHHHHHhCCchhhhhhheeee
Q psy5051 2 GIYDLPVVIDYILSVTGQ---PKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGM 54 (87)
Q Consensus 2 a~~D~~~~i~~v~~~~~~---~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~ 54 (87)
|.+|+...|+.+..+.+. .|.+..|-|--|.++.++=..+||+ +.+.+..
T Consensus 151 ALaDla~fI~~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel---~~GsvAS 203 (514)
T KOG2182|consen 151 ALADLAEFIKAMNAKFNFSDDSKWITFGGSYSGSLSAWFREKYPEL---TVGSVAS 203 (514)
T ss_pred HHHHHHHHHHHHHhhcCCCCCCCeEEECCCchhHHHHHHHHhCchh---heeeccc
Confidence 346788888877766642 3788999999999999999999994 4444443
No 244
>cd01086 MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and Peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=50.49 E-value=12 Score=24.55 Aligned_cols=30 Identities=20% Similarity=0.307 Sum_probs=21.7
Q ss_pred ccHHHHHHHHHHHhCCCc-eeEEEEChHHHH
Q psy5051 4 YDLPVVIDYILSVTGQPK-LSYIGHSMGTTM 33 (87)
Q Consensus 4 ~D~~~~i~~v~~~~~~~~-~~lvGHS~Gg~i 33 (87)
.|+.+.++.+.+..++.. .+.+||++|-.+
T Consensus 135 ~~v~~~~~~~~~~~G~~~~~~~~GHgiG~~~ 165 (238)
T cd01086 135 GDIGHAIEKYAEKNGYSVVREFGGHGIGRKF 165 (238)
T ss_pred HHHHHHHHHHHHHcCcceecCccccCCCCcc
Confidence 466677777777777643 366999999865
No 245
>cd01088 MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=50.31 E-value=9.5 Score=26.36 Aligned_cols=28 Identities=18% Similarity=0.329 Sum_probs=21.8
Q ss_pred ccHHHHHHHHHHHhCCCce-eEEEEChHH
Q psy5051 4 YDLPVVIDYILSVTGQPKL-SYIGHSMGT 31 (87)
Q Consensus 4 ~D~~~~i~~v~~~~~~~~~-~lvGHS~Gg 31 (87)
.|+.+.++.+.+..+..++ ++.|||+|-
T Consensus 127 ~dV~~ai~~~i~~~G~~~~~~~~GHgig~ 155 (291)
T cd01088 127 GEIGEAIEEVIESYGFKPIRNLTGHSIER 155 (291)
T ss_pred HHHHHHHHHHHHHcCCEEeecCCccCccC
Confidence 4777888888888877553 679999994
No 246
>KOG2551|consensus
Probab=49.06 E-value=9.8 Score=25.90 Aligned_cols=35 Identities=14% Similarity=0.235 Sum_probs=22.2
Q ss_pred eEEEEChHHHHHHHHHHhCCc---hh--hhhhheeeeccc
Q psy5051 23 SYIGHSMGTTMFWVLLSEKPE---YN--DKIEVMIGMAPI 57 (87)
Q Consensus 23 ~lvGHS~Gg~i~~~~a~~~p~---~~--~~l~~~v~~~p~ 57 (87)
-++|.|+|+.++...+...+. .. -.++.+++++..
T Consensus 107 GllGFSQGA~laa~l~~~~~~~~~~~~~P~~kF~v~~SGf 146 (230)
T KOG2551|consen 107 GLLGFSQGAALAALLAGLGQKGLPYVKQPPFKFAVFISGF 146 (230)
T ss_pred cccccchhHHHHHHhhcccccCCcccCCCCeEEEEEEecC
Confidence 369999999999887763221 11 134556666554
No 247
>PF00091 Tubulin: Tubulin/FtsZ family, GTPase domain; InterPro: IPR003008 This domain is found in all tubulin chains, as well as the bacterial FtsZ family of proteins. These proteins are involved in polymer formation. Tubulin is the major component of microtubules, while FtsZ is the polymer-forming protein of bacterial cell division, it is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases, this entry is the GTPase domain. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in bacteria and archaea.; GO: 0051258 protein polymerization, 0043234 protein complex; PDB: 3E22_B 1SA1_D 3DU7_B 2P4N_B 3DCO_B 1Z2B_D 1SA0_B 2XRP_C 1TVK_B 2BTQ_B ....
Probab=48.99 E-value=21 Score=23.41 Aligned_cols=32 Identities=19% Similarity=0.040 Sum_probs=21.3
Q ss_pred HHHHHHHHHHh---CCCceeEEEEChHHHHHHHHH
Q psy5051 7 PVVIDYILSVT---GQPKLSYIGHSMGTTMFWVLL 38 (87)
Q Consensus 7 ~~~i~~v~~~~---~~~~~~lvGHS~Gg~i~~~~a 38 (87)
....+.+++.. ..-..+++-||+||..+.-++
T Consensus 108 ~~~~~~ir~~~e~~d~~~~~~i~~slgGGTGSG~~ 142 (216)
T PF00091_consen 108 EEILEQIRKEIEKCDSLDGFFIVHSLGGGTGSGLG 142 (216)
T ss_dssp HHHHHHHHHHHHTSTTESEEEEEEESSSSHHHHHH
T ss_pred cccccccchhhccccccccceecccccceeccccc
Confidence 33445555544 556789999999998755444
No 248
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=48.88 E-value=66 Score=20.23 Aligned_cols=27 Identities=22% Similarity=0.101 Sum_probs=21.6
Q ss_pred HhCCCceeEEEEChHHHHHHHHHHhCC
Q psy5051 16 VTGQPKLSYIGHSMGTTMFWVLLSEKP 42 (87)
Q Consensus 16 ~~~~~~~~lvGHS~Gg~i~~~~a~~~p 42 (87)
+.+...=.+.|=|.|+.++..+++.++
T Consensus 23 e~~~~~d~i~GtSaGai~aa~~a~g~~ 49 (194)
T cd07207 23 EAGILKKRVAGTSAGAITAALLALGYS 49 (194)
T ss_pred HcCCCcceEEEECHHHHHHHHHHcCCC
Confidence 345556778999999999999988654
No 249
>PLN03006 carbonate dehydratase
Probab=48.43 E-value=26 Score=24.86 Aligned_cols=32 Identities=13% Similarity=0.222 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHhCCCceeEEEEChHHHHHHHH
Q psy5051 6 LPVVIDYILSVTGQPKLSYIGHSMGTTMFWVL 37 (87)
Q Consensus 6 ~~~~i~~v~~~~~~~~~~lvGHS~Gg~i~~~~ 37 (87)
..+.+++....++.+.+.++|||-=|.+...+
T Consensus 158 ~~aSLEYAV~~L~V~~IVV~GHs~CGaV~Aal 189 (301)
T PLN03006 158 TKAALEFSVNTLNVENILVIGHSRCGGIQALM 189 (301)
T ss_pred hhhhHHHHHHHhCCCEEEEecCCCchHHHHHh
Confidence 56789999999999999999999877766433
No 250
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=47.98 E-value=27 Score=24.52 Aligned_cols=37 Identities=19% Similarity=0.375 Sum_probs=28.3
Q ss_pred cccHHHHHHHHHHHhCCCceeEEEEChHHHHHHHHHHh
Q psy5051 3 IYDLPVVIDYILSVTGQPKLSYIGHSMGTTMFWVLLSE 40 (87)
Q Consensus 3 ~~D~~~~i~~v~~~~~~~~~~lvGHS~Gg~i~~~~a~~ 40 (87)
.+|+..+++++. ..|.+++-++.-|+.+-+++..+++
T Consensus 85 ~~sL~~V~dwl~-~~g~~~~GLIAaSLSaRIAy~Va~~ 121 (294)
T PF02273_consen 85 KASLLTVIDWLA-TRGIRRIGLIAASLSARIAYEVAAD 121 (294)
T ss_dssp HHHHHHHHHHHH-HTT---EEEEEETTHHHHHHHHTTT
T ss_pred HHHHHHHHHHHH-hcCCCcchhhhhhhhHHHHHHHhhc
Confidence 457777888877 6778899999999999999888763
No 251
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=47.90 E-value=37 Score=24.96 Aligned_cols=27 Identities=19% Similarity=0.145 Sum_probs=21.7
Q ss_pred hCCCceeEEEEChHHHHHHHHHHhCCc
Q psy5051 17 TGQPKLSYIGHSMGTTMFWVLLSEKPE 43 (87)
Q Consensus 17 ~~~~~~~lvGHS~Gg~i~~~~a~~~p~ 43 (87)
.+..+=.+.|=|.|+.++..+++..++
T Consensus 98 ~gl~p~vIsGTSaGAivAal~as~~~e 124 (421)
T cd07230 98 ANLLPRIISGSSAGSIVAAILCTHTDE 124 (421)
T ss_pred cCCCCCEEEEECHHHHHHHHHHcCCHH
Confidence 455556799999999999999886655
No 252
>KOG3253|consensus
Probab=46.98 E-value=4.3 Score=31.66 Aligned_cols=38 Identities=11% Similarity=0.274 Sum_probs=26.7
Q ss_pred HhCCCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeec
Q psy5051 16 VTGQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMA 55 (87)
Q Consensus 16 ~~~~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~ 55 (87)
++...+++|+|.|||+.++......+-+. .|..+|+++
T Consensus 246 efpha~IiLvGrsmGAlVachVSpsnsdv--~V~~vVCig 283 (784)
T KOG3253|consen 246 EFPHAPIILVGRSMGALVACHVSPSNSDV--EVDAVVCIG 283 (784)
T ss_pred cCCCCceEEEecccCceeeEEeccccCCc--eEEEEEEec
Confidence 45678999999999988876665544331 266667766
No 253
>PF00484 Pro_CA: Carbonic anhydrase; InterPro: IPR001765 Carbonic anhydrases (4.2.1.1 from EC) (CA) are zinc metalloenzymes which catalyze the reversible hydration of carbon dioxide. In Escherichia coli, CA (gene cynT) is involved in recycling carbon dioxide formed in the bicarbonate-dependent decomposition of cyanate by cyanase (gene cynS). By this action, it prevents the depletion of cellular bicarbonate []. In photosynthetic bacteria and plant chloroplast, CA is essential to inorganic carbon fixation []. Prokaryotic and plant chloroplast CA are structurally and evolutionary related and form a family distinct from the one which groups the many different forms of eukaryotic CA's (see IPR001148 from INTERPRO). Hypothetical proteins yadF from Escherichia coli and HI1301 from Haemophilus influenzae also belong to this family. This family also includes, YbcF and related proteins, which are inactive homologues of bacterial carbonic anhydrase.; GO: 0004089 carbonate dehydratase activity, 0008270 zinc ion binding; PDB: 1DDZ_B 3LAS_A 2W3N_A 2W3Q_A 1G5C_F 3E2A_A 3E2X_B 2A8C_A 2A8D_D 3E3F_A ....
Probab=46.96 E-value=49 Score=20.25 Aligned_cols=33 Identities=15% Similarity=0.184 Sum_probs=24.1
Q ss_pred cHHHHHHHHHHHhCCCceeEEEEChHHHHHHHH
Q psy5051 5 DLPVVIDYILSVTGQPKLSYIGHSMGTTMFWVL 37 (87)
Q Consensus 5 D~~~~i~~v~~~~~~~~~~lvGHS~Gg~i~~~~ 37 (87)
+.-+-+++.....+.+.+.++|||-=|++...+
T Consensus 40 ~~~~sle~av~~l~v~~IiV~gHt~CGa~~~~~ 72 (153)
T PF00484_consen 40 SALASLEYAVYHLGVKEIIVCGHTDCGAIKAAL 72 (153)
T ss_dssp HHHHHHHHHHHTST-SEEEEEEETT-HHHHHHH
T ss_pred chhhheeeeeecCCCCEEEEEcCCCchHHHHHH
Confidence 344567777888999999999999988887443
No 254
>PLN02154 carbonic anhydrase
Probab=46.90 E-value=32 Score=24.24 Aligned_cols=34 Identities=9% Similarity=0.189 Sum_probs=27.5
Q ss_pred cHHHHHHHHHHHhCCCceeEEEEChHHHHHHHHH
Q psy5051 5 DLPVVIDYILSVTGQPKLSYIGHSMGTTMFWVLL 38 (87)
Q Consensus 5 D~~~~i~~v~~~~~~~~~~lvGHS~Gg~i~~~~a 38 (87)
...+.+++....++.+.+.++|||-=|.+...+.
T Consensus 151 ~~~aslEyAv~~L~v~~IvV~GHs~CGAV~Aal~ 184 (290)
T PLN02154 151 ETNSALEFAVTTLQVENIIVMGHSNCGGIAALMS 184 (290)
T ss_pred chhhHHHHHHHHhCCCEEEEecCCCchHHHHHHh
Confidence 3567889999999999999999998777765443
No 255
>PLN03014 carbonic anhydrase
Probab=46.18 E-value=29 Score=25.08 Aligned_cols=32 Identities=19% Similarity=0.237 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHhCCCceeEEEEChHHHHHHHH
Q psy5051 6 LPVVIDYILSVTGQPKLSYIGHSMGTTMFWVL 37 (87)
Q Consensus 6 ~~~~i~~v~~~~~~~~~~lvGHS~Gg~i~~~~ 37 (87)
..+.+++....++.+.+.++|||-=|.+...+
T Consensus 206 v~asLEYAV~~L~V~~IVV~GHs~CGaV~Aa~ 237 (347)
T PLN03014 206 VGAAIEYAVLHLKVENIVVIGHSACGGIKGLM 237 (347)
T ss_pred chhHHHHHHHHhCCCEEEEeCCCCchHHHHHH
Confidence 66889999999999999999999877665443
No 256
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=45.78 E-value=40 Score=23.14 Aligned_cols=23 Identities=13% Similarity=0.131 Sum_probs=19.3
Q ss_pred CCCceeEEEEChHHHHHHHHHHh
Q psy5051 18 GQPKLSYIGHSMGTTMFWVLLSE 40 (87)
Q Consensus 18 ~~~~~~lvGHS~Gg~i~~~~a~~ 40 (87)
+.++++++|.|-|+.++-.++..
T Consensus 90 ~gd~I~lfGFSRGA~~AR~~a~~ 112 (277)
T PF09994_consen 90 PGDRIYLFGFSRGAYTARAFANM 112 (277)
T ss_pred CcceEEEEecCccHHHHHHHHHH
Confidence 45789999999999998887743
No 257
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=45.66 E-value=35 Score=25.01 Aligned_cols=27 Identities=19% Similarity=0.081 Sum_probs=21.4
Q ss_pred hCCCceeEEEEChHHHHHHHHHHhCCc
Q psy5051 17 TGQPKLSYIGHSMGTTMFWVLLSEKPE 43 (87)
Q Consensus 17 ~~~~~~~lvGHS~Gg~i~~~~a~~~p~ 43 (87)
.+..+=.+.|-|.|+.++..+++..++
T Consensus 92 ~gllp~iI~GtSAGAivaalla~~t~~ 118 (407)
T cd07232 92 ADLLPNVISGTSGGSLVAALLCTRTDE 118 (407)
T ss_pred CCCCCCEEEEECHHHHHHHHHHcCCHH
Confidence 455566789999999999999885554
No 258
>PRK10437 carbonic anhydrase; Provisional
Probab=45.41 E-value=37 Score=22.84 Aligned_cols=33 Identities=15% Similarity=0.138 Sum_probs=26.9
Q ss_pred cHHHHHHHHHHHhCCCceeEEEEChHHHHHHHH
Q psy5051 5 DLPVVIDYILSVTGQPKLSYIGHSMGTTMFWVL 37 (87)
Q Consensus 5 D~~~~i~~v~~~~~~~~~~lvGHS~Gg~i~~~~ 37 (87)
+..+.+++....++.+.+.++||+-=|.+...+
T Consensus 76 ~~~~~leyAV~~L~v~~IvV~GHt~CG~V~Aal 108 (220)
T PRK10437 76 NCLSVVQYAVDVLEVEHIIICGHYGCGGVQAAV 108 (220)
T ss_pred chHHHHHHHHHHcCCCEEEEeCCCCchHHHHHH
Confidence 456778888889999999999999877776544
No 259
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=45.23 E-value=58 Score=21.69 Aligned_cols=22 Identities=18% Similarity=0.037 Sum_probs=18.8
Q ss_pred ceeEEEEChHHHHHHHHHHhCC
Q psy5051 21 KLSYIGHSMGTTMFWVLLSEKP 42 (87)
Q Consensus 21 ~~~lvGHS~Gg~i~~~~a~~~p 42 (87)
.-.+.|=|.|+.++..+++..+
T Consensus 30 ~~~i~G~SAGAl~aa~~asg~~ 51 (233)
T cd07224 30 TTPLAGASAGSLAAACSASGLS 51 (233)
T ss_pred CCEEEEEcHHHHHHHHHHcCCC
Confidence 3479999999999999998765
No 260
>TIGR00501 met_pdase_II methionine aminopeptidase, type II. Methionine aminopeptidase (map) is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. The role of this protein in general is to produce the mature amino end of cytosolic proteins by removing the N-terminal methionine. This model describes type II, among which the eukaryotic members typically have an N-terminal extension not present in archaeal members. It can act cotranslationally. The enzyme from rat has been shown to associate with translation initiation factor 2 (IF-2) and may have a role in translational regulation.
Probab=44.78 E-value=13 Score=25.82 Aligned_cols=27 Identities=22% Similarity=0.375 Sum_probs=21.6
Q ss_pred ccHHHHHHHHHHHhCCCce-eEEEEChH
Q psy5051 4 YDLPVVIDYILSVTGQPKL-SYIGHSMG 30 (87)
Q Consensus 4 ~D~~~~i~~v~~~~~~~~~-~lvGHS~G 30 (87)
.|+.+.++.+.+..+..++ +..||++|
T Consensus 131 ~dV~~ai~~vi~~~G~~~i~~~~GHgig 158 (295)
T TIGR00501 131 GEIGKAIQEVIESYGVKPISNLTGHSMA 158 (295)
T ss_pred HHHHHHHHHHHHHcCCeeecCCCCccee
Confidence 5778888888888877553 78999998
No 261
>PRK07281 methionine aminopeptidase; Reviewed
Probab=44.28 E-value=22 Score=24.70 Aligned_cols=27 Identities=22% Similarity=0.417 Sum_probs=19.0
Q ss_pred cHHHHHHHHHHHhCCCce-eEEEEChHH
Q psy5051 5 DLPVVIDYILSVTGQPKL-SYIGHSMGT 31 (87)
Q Consensus 5 D~~~~i~~v~~~~~~~~~-~lvGHS~Gg 31 (87)
|+...++.+.+..+...+ +.+||+.|=
T Consensus 176 di~~a~~~~~~~~G~~~~~~~~GHGIGl 203 (286)
T PRK07281 176 DIGAAIQEYAESRGYGVVRDLVGHGVGP 203 (286)
T ss_pred HHHHHHHHHHHHcCCccCCCeeeeeCCC
Confidence 566667777766665543 679999993
No 262
>PLN03019 carbonic anhydrase
Probab=44.27 E-value=31 Score=24.77 Aligned_cols=32 Identities=19% Similarity=0.237 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHhCCCceeEEEEChHHHHHHHH
Q psy5051 6 LPVVIDYILSVTGQPKLSYIGHSMGTTMFWVL 37 (87)
Q Consensus 6 ~~~~i~~v~~~~~~~~~~lvGHS~Gg~i~~~~ 37 (87)
+.+.+++....++.+.+.++|||-=|.+...+
T Consensus 201 v~aSIEYAV~~L~V~~IVV~GHs~CGaVkAal 232 (330)
T PLN03019 201 VGAAIEYAVLHLKVENIVVIGHSACGGIKGLM 232 (330)
T ss_pred cchhHHHHHHHhCCCEEEEecCCCchHHHHHH
Confidence 45789999999999999999999877665443
No 263
>KOG1202|consensus
Probab=42.61 E-value=27 Score=30.09 Aligned_cols=45 Identities=20% Similarity=0.194 Sum_probs=30.4
Q ss_pred HHHHHHHhCCCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeec
Q psy5051 10 IDYILSVTGQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMA 55 (87)
Q Consensus 10 i~~v~~~~~~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~ 55 (87)
++.+++.-+..+..++|+|.|+.+++..+..-.+.. ....++++.
T Consensus 2172 irqirkvQP~GPYrl~GYSyG~~l~f~ma~~Lqe~~-~~~~lillD 2216 (2376)
T KOG1202|consen 2172 IRQIRKVQPEGPYRLAGYSYGACLAFEMASQLQEQQ-SPAPLILLD 2216 (2376)
T ss_pred HHHHHhcCCCCCeeeeccchhHHHHHHHHHHHHhhc-CCCcEEEec
Confidence 333444456679999999999999988886654432 233466664
No 264
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=42.53 E-value=1e+02 Score=20.63 Aligned_cols=23 Identities=26% Similarity=0.047 Sum_probs=19.4
Q ss_pred eeEEEEChHHHHHHHHHHhCCch
Q psy5051 22 LSYIGHSMGTTMFWVLLSEKPEY 44 (87)
Q Consensus 22 ~~lvGHS~Gg~i~~~~a~~~p~~ 44 (87)
=.+.|-|.|+.++..+++..++.
T Consensus 29 d~i~GtSaGAi~a~~~~~g~~~~ 51 (266)
T cd07208 29 DLVIGVSAGALNAASYLSGQRGR 51 (266)
T ss_pred CEEEEECHHHHhHHHHHhCCcch
Confidence 37799999999999999887653
No 265
>COG1957 URH1 Inosine-uridine nucleoside N-ribohydrolase [Nucleotide transport and metabolism]
Probab=41.22 E-value=85 Score=22.35 Aligned_cols=50 Identities=18% Similarity=0.299 Sum_probs=34.5
Q ss_pred HHHHHHHHHHhCCCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeeccccc
Q psy5051 7 PVVIDYILSVTGQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPIAF 59 (87)
Q Consensus 7 ~~~i~~v~~~~~~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~~~ 59 (87)
..+++.+++.. .++.++.-+==+.+++.+. ..|+..++++.++.++....
T Consensus 106 ~~ii~~l~~~~--g~vtlva~GPLTNiAlAl~-~~P~i~~~ik~iviMGGa~~ 155 (311)
T COG1957 106 DAIIDTLMANP--GEVTLVATGPLTNIALALR-KDPEIAKRIKEIVIMGGAFF 155 (311)
T ss_pred HHHHHHHHhCC--CcEEEEecCChHHHHHHHH-hCcchhhhhcEEEEecCccC
Confidence 34555555544 5677776655566776664 58999999999999886543
No 266
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=40.90 E-value=48 Score=19.45 Aligned_cols=37 Identities=22% Similarity=0.130 Sum_probs=26.0
Q ss_pred HHHHHHHHHhCCCceeEEEEChHHHH--HHHHHHhCCch
Q psy5051 8 VVIDYILSVTGQPKLSYIGHSMGTTM--FWVLLSEKPEY 44 (87)
Q Consensus 8 ~~i~~v~~~~~~~~~~lvGHS~Gg~i--~~~~a~~~p~~ 44 (87)
..++++++.++..++.++|-|--.-. -...+.++|++
T Consensus 53 ~~i~~i~~~fP~~kfiLIGDsgq~DpeiY~~ia~~~P~~ 91 (100)
T PF09949_consen 53 DNIERILRDFPERKFILIGDSGQHDPEIYAEIARRFPGR 91 (100)
T ss_pred HHHHHHHHHCCCCcEEEEeeCCCcCHHHHHHHHHHCCCC
Confidence 46777888899999999998854432 22345668874
No 267
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=40.63 E-value=65 Score=20.20 Aligned_cols=29 Identities=14% Similarity=0.056 Sum_probs=22.0
Q ss_pred HHhCCCceeEEEEChHHHHHHHHHHhCCc
Q psy5051 15 SVTGQPKLSYIGHSMGTTMFWVLLSEKPE 43 (87)
Q Consensus 15 ~~~~~~~~~lvGHS~Gg~i~~~~a~~~p~ 43 (87)
++.+...=.+.|=|.|+.++..+++.++.
T Consensus 23 ~e~g~~~d~i~GtSaGAi~aa~~a~g~~~ 51 (175)
T cd07228 23 EEEGIEIDIIAGSSIGALVGALYAAGHLD 51 (175)
T ss_pred HHCCCCeeEEEEeCHHHHHHHHHHcCCCH
Confidence 34455556779999999999999887553
No 268
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=40.46 E-value=77 Score=22.28 Aligned_cols=41 Identities=15% Similarity=-0.039 Sum_probs=25.4
Q ss_pred CCCceeEEEEChHHHHHHHHHHh----CCch---hhhhhheeeecccc
Q psy5051 18 GQPKLSYIGHSMGTTMFWVLLSE----KPEY---NDKIEVMIGMAPIA 58 (87)
Q Consensus 18 ~~~~~~lvGHS~Gg~i~~~~a~~----~p~~---~~~l~~~v~~~p~~ 58 (87)
...++++.|-|-||.-+-.++.. ..+. .-.++++++..|..
T Consensus 134 ~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkGi~IGng~~ 181 (415)
T PF00450_consen 134 RSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKGIAIGNGWI 181 (415)
T ss_dssp TTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEEEEEESE-S
T ss_pred cCCCEEEEccccccccchhhHHhhhhccccccccccccccceecCccc
Confidence 44589999999999986666543 2110 12466666655543
No 269
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=40.31 E-value=73 Score=21.44 Aligned_cols=20 Identities=40% Similarity=0.627 Sum_probs=17.0
Q ss_pred eEEEEChHHHHHHHHHHhCCc
Q psy5051 23 SYIGHSMGTTMFWVLLSEKPE 43 (87)
Q Consensus 23 ~lvGHS~Gg~i~~~~a~~~p~ 43 (87)
.+.|-|.|+.++..++. .|+
T Consensus 34 ~i~GtSaGAl~aa~~a~-~~~ 53 (246)
T cd07222 34 RFAGASAGSLVAAVLLT-APE 53 (246)
T ss_pred EEEEECHHHHHHHHHhc-ChH
Confidence 78999999999999984 454
No 270
>PRK05716 methionine aminopeptidase; Validated
Probab=39.65 E-value=21 Score=23.68 Aligned_cols=29 Identities=24% Similarity=0.352 Sum_probs=19.8
Q ss_pred ccHHHHHHHHHHHhCCCc-eeEEEEChHHH
Q psy5051 4 YDLPVVIDYILSVTGQPK-LSYIGHSMGTT 32 (87)
Q Consensus 4 ~D~~~~i~~v~~~~~~~~-~~lvGHS~Gg~ 32 (87)
.|+...++.+.+..+... .+.+||+.|-.
T Consensus 145 ~dv~~~~~~~~~~~g~~~~~~~~GHgiG~~ 174 (252)
T PRK05716 145 GDIGHAIQKYAEAEGFSVVREYCGHGIGRK 174 (252)
T ss_pred HHHHHHHHHHHHHcCCeeecCccccccCCc
Confidence 356666777777666643 25689999875
No 271
>cd03378 beta_CA_cladeC Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=39.50 E-value=48 Score=21.00 Aligned_cols=31 Identities=23% Similarity=0.369 Sum_probs=24.1
Q ss_pred cHHHHHHHHHHHhCCCceeEEEEChHHHHHH
Q psy5051 5 DLPVVIDYILSVTGQPKLSYIGHSMGTTMFW 35 (87)
Q Consensus 5 D~~~~i~~v~~~~~~~~~~lvGHS~Gg~i~~ 35 (87)
+..+.+++....++.+.+.++|||-=|.+..
T Consensus 77 ~~~~sl~yav~~l~v~~IvV~GHt~CG~~~a 107 (154)
T cd03378 77 DVLGSLEYAVEVLGVPLVVVLGHESCGAVAA 107 (154)
T ss_pred hHHHHHHHHHHHhCCCEEEEEcCCCccHHHH
Confidence 3456677888889999999999999555543
No 272
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=39.36 E-value=79 Score=21.24 Aligned_cols=20 Identities=25% Similarity=0.253 Sum_probs=18.0
Q ss_pred eEEEEChHHHHHHHHHHhCC
Q psy5051 23 SYIGHSMGTTMFWVLLSEKP 42 (87)
Q Consensus 23 ~lvGHS~Gg~i~~~~a~~~p 42 (87)
.+.|=|.|+.++..+++..+
T Consensus 34 ~i~GtSAGAl~aa~~a~g~~ 53 (243)
T cd07204 34 RIAGASAGAIVAAVVLCGVS 53 (243)
T ss_pred EEEEEcHHHHHHHHHHhCCC
Confidence 88999999999999998764
No 273
>PRK12318 methionine aminopeptidase; Provisional
Probab=38.95 E-value=21 Score=24.78 Aligned_cols=27 Identities=22% Similarity=0.480 Sum_probs=18.4
Q ss_pred cHHHHHHHHHHHhCCCce-eEEEEChHH
Q psy5051 5 DLPVVIDYILSVTGQPKL-SYIGHSMGT 31 (87)
Q Consensus 5 D~~~~i~~v~~~~~~~~~-~lvGHS~Gg 31 (87)
|+...++.+.+..+...+ +.+||+.|=
T Consensus 186 dv~~a~~~~~~~~G~~~~~~~~GHgIGl 213 (291)
T PRK12318 186 EIGEVIENCADKYGFSVVDQFVGHGVGI 213 (291)
T ss_pred HHHHHHHHHHHHcCCccCCCcccCCcCc
Confidence 566666666666666432 579999993
No 274
>COG4667 Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=38.88 E-value=99 Score=21.87 Aligned_cols=41 Identities=22% Similarity=0.212 Sum_probs=27.7
Q ss_pred HHHHHHHHHhCCCceeEEEEChHHHHHHHHHHhCCchhhhh
Q psy5051 8 VVIDYILSVTGQPKLSYIGHSMGTTMFWVLLSEKPEYNDKI 48 (87)
Q Consensus 8 ~~i~~v~~~~~~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l 48 (87)
.++|..++.....==.++|-|+|+.-+..|.+..+++..++
T Consensus 28 GVLD~fl~a~~~~f~~~~GvSAGA~n~~aYls~Q~gra~~~ 68 (292)
T COG4667 28 GVLDEFLRANFNPFDLVVGVSAGALNLVAYLSKQRGRARRV 68 (292)
T ss_pred HHHHHHHHhccCCcCeeeeecHhHHhHHHHhhcCCchHHHH
Confidence 35555553332222245899999999999999999875443
No 275
>TIGR00500 met_pdase_I methionine aminopeptidase, type I. Methionine aminopeptidase is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. This model describes type I. The role of this protein in general is to produce the mature form of cytosolic proteins by removing the N-terminal methionine.
Probab=38.66 E-value=18 Score=23.93 Aligned_cols=29 Identities=21% Similarity=0.420 Sum_probs=19.1
Q ss_pred cHHHHHHHHHHHhCCCc-eeEEEEChHHHH
Q psy5051 5 DLPVVIDYILSVTGQPK-LSYIGHSMGTTM 33 (87)
Q Consensus 5 D~~~~i~~v~~~~~~~~-~~lvGHS~Gg~i 33 (87)
|+...++.+.+..+... .+.+||++|=.+
T Consensus 144 ~v~~~~~~~~~~~g~~~~~~~~GHgiG~~~ 173 (247)
T TIGR00500 144 EIGAAIQKYAEAKGFSVVREYCGHGIGRKF 173 (247)
T ss_pred HHHHHHHHHHHHcCCEeccCccCCccCccc
Confidence 55666666666666543 356899998643
No 276
>COG3675 Predicted lipase [Lipid metabolism]
Probab=37.85 E-value=20 Score=25.60 Aligned_cols=27 Identities=22% Similarity=0.297 Sum_probs=20.8
Q ss_pred HHHHHHHHhCC-CceeEEEEChHHHHHH
Q psy5051 9 VIDYILSVTGQ-PKLSYIGHSMGTTMFW 35 (87)
Q Consensus 9 ~i~~v~~~~~~-~~~~lvGHS~Gg~i~~ 35 (87)
..+++++..+. -.+-++|||.|++++.
T Consensus 163 q~~~lleeiP~~Yrig~tghS~g~aii~ 190 (332)
T COG3675 163 QEQTLLEEIPQGYRIGITGHSSGGAIIC 190 (332)
T ss_pred HHHHHHHhcccceEEEEEeecCCccEEE
Confidence 56677777776 4568999999999853
No 277
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=36.95 E-value=95 Score=20.99 Aligned_cols=20 Identities=30% Similarity=0.386 Sum_probs=17.7
Q ss_pred eEEEEChHHHHHHHHHHhCC
Q psy5051 23 SYIGHSMGTTMFWVLLSEKP 42 (87)
Q Consensus 23 ~lvGHS~Gg~i~~~~a~~~p 42 (87)
.+.|=|.|+.++..+++..+
T Consensus 33 ~i~GtSAGAl~aa~~a~g~~ 52 (245)
T cd07218 33 KISGASAGALAACCLLCDLP 52 (245)
T ss_pred eEEEEcHHHHHHHHHHhCCc
Confidence 38999999999999998765
No 278
>PRK12896 methionine aminopeptidase; Reviewed
Probab=36.94 E-value=21 Score=23.66 Aligned_cols=30 Identities=20% Similarity=0.355 Sum_probs=20.2
Q ss_pred ccHHHHHHHHHHHhCCCc-eeEEEEChHHHH
Q psy5051 4 YDLPVVIDYILSVTGQPK-LSYIGHSMGTTM 33 (87)
Q Consensus 4 ~D~~~~i~~v~~~~~~~~-~~lvGHS~Gg~i 33 (87)
.|+...++.+.+..+... .+.+||++|-.+
T Consensus 150 ~~v~~~~~~~~~~~G~~~~~~~~GHgiG~~~ 180 (255)
T PRK12896 150 NDIGRAIEDFAKKNGYSVVRDLTGHGVGRSL 180 (255)
T ss_pred HHHHHHHHHHHHHcCCEeccCcccCCcCccc
Confidence 355666666666666532 367999999854
No 279
>PRK12897 methionine aminopeptidase; Reviewed
Probab=36.81 E-value=34 Score=22.80 Aligned_cols=30 Identities=20% Similarity=0.398 Sum_probs=21.2
Q ss_pred ccHHHHHHHHHHHhCCCc-eeEEEEChHHHH
Q psy5051 4 YDLPVVIDYILSVTGQPK-LSYIGHSMGTTM 33 (87)
Q Consensus 4 ~D~~~~i~~v~~~~~~~~-~~lvGHS~Gg~i 33 (87)
.|+...++.+.+..+... .+..||+.|=.+
T Consensus 144 ~dv~~a~~~~~~~~g~~~~~~~~GHgiGl~~ 174 (248)
T PRK12897 144 GDIGYAIESYVANEGFSVARDFTGHGIGKEI 174 (248)
T ss_pred chHHHHHHHHHHHcCCccCCCeEECccCCcc
Confidence 467777777777666532 477999999744
No 280
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=35.88 E-value=66 Score=23.63 Aligned_cols=29 Identities=14% Similarity=0.071 Sum_probs=22.4
Q ss_pred HHhCCCceeEEEEChHHHHHHHHHHhCCc
Q psy5051 15 SVTGQPKLSYIGHSMGTTMFWVLLSEKPE 43 (87)
Q Consensus 15 ~~~~~~~~~lvGHS~Gg~i~~~~a~~~p~ 43 (87)
.+.+..+=.+.|-|.|+.++..++...++
T Consensus 106 ~e~gl~p~~i~GtS~Gaivaa~~a~~~~~ 134 (391)
T cd07229 106 WLRGLLPRIITGTATGALIAALVGVHTDE 134 (391)
T ss_pred HHcCCCCceEEEecHHHHHHHHHHcCCHH
Confidence 34566666799999999999999885443
No 281
>KOG4389|consensus
Probab=35.06 E-value=63 Score=24.93 Aligned_cols=37 Identities=19% Similarity=0.434 Sum_probs=27.7
Q ss_pred CCcccHHHHHHHHHHH---hC--CCceeEEEEChHHHHHHHH
Q psy5051 1 MGIYDLPVVIDYILSV---TG--QPKLSYIGHSMGTTMFWVL 37 (87)
Q Consensus 1 ~a~~D~~~~i~~v~~~---~~--~~~~~lvGHS~Gg~i~~~~ 37 (87)
|+..|-.-.++++.+. +| .+++.+.|.|.|++-..+-
T Consensus 194 mGl~DQqLAl~WV~~Ni~aFGGnp~~vTLFGESAGaASv~aH 235 (601)
T KOG4389|consen 194 MGLLDQQLALQWVQENIAAFGGNPSRVTLFGESAGAASVVAH 235 (601)
T ss_pred cchHHHHHHHHHHHHhHHHhCCCcceEEEeccccchhhhhhe
Confidence 5667778888888775 33 4689999999998765443
No 282
>PF00557 Peptidase_M24: Metallopeptidase family M24 This Prosite entry corresponds to sub-family M24B This Prosite entry corresponds to sub-families M24A and M24C; InterPro: IPR000994 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This entry contains proteins that belong to MEROPS peptidase family M24 (clan MG), which share a common structural-fold, the "pita-bread" fold. The fold contains both alpha helices and an anti-parallel beta sheet within two structurally similar domains that are thought to be derived from an ancient gene duplication. The active site, where conserved, is located between the two domains. The fold is common to methionine aminopeptidase (3.4.11.18 from EC), aminopeptidase P (3.4.11.9 from EC), prolidase (3.4.13.9 from EC), agropine synthase and creatinase (3.5.3.3 from EC). Though many of these peptidases require a divalent cation, creatinase is not a metal-dependent enzyme [, , ]. The entry also contains proteins that have lost catalytic activity, for example Spt16, which is a component of the FACT complex. The crystal structure of the N-terminal domain of Spt16, determined to 2.1A, reveals an aminopeptidase P fold whose enzymatic activity has been lost. This fold binds directly to histones H3-H4 through a interaction with their globular core domains, as well as with their N-terminal tails []. The FACT complex is a stable heterodimer in Saccharomyces cerevisiae (Baker's yeast) comprising Spt16p (P32558 from SWISSPROT, IPR013953 from INTERPRO) and Pob3p (Q04636 from SWISSPROT, IPR000969 from INTERPRO). The complex plays a role in transcription initiation and promotes binding of TATA-binding protein (TBP) to a TATA box in chromatin []; it also facilitates RNA Polymerase II transcription elongation through nucleosomes by destabilising and then reassembling nucleosome structure [, , ]. ; GO: 0009987 cellular process; PDB: 4A6V_B 4A6W_A 3CTZ_A 3IG4_B 2B3H_A 2NQ6_A 2NQ7_A 2GZ5_A 2G6P_A 2B3L_A ....
Probab=34.62 E-value=13 Score=23.76 Aligned_cols=27 Identities=26% Similarity=0.399 Sum_probs=19.2
Q ss_pred ccHHHHHHHHHHHhCC--CceeEEEEChH
Q psy5051 4 YDLPVVIDYILSVTGQ--PKLSYIGHSMG 30 (87)
Q Consensus 4 ~D~~~~i~~v~~~~~~--~~~~lvGHS~G 30 (87)
.|+.+.+....+..+. ...+.+|||.|
T Consensus 129 ~~v~~~~~~~~~~~g~~~~~~~~~GH~iG 157 (207)
T PF00557_consen 129 SDVYEAVREVLEEYGLEEPYPHGLGHGIG 157 (207)
T ss_dssp HHHHHHHHHHHHHTTEGEEBTSSSEEEES
T ss_pred chhhHHHHHHHHhhcccceeeeccccccc
Confidence 4666677777777665 33567999999
No 283
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=34.56 E-value=68 Score=29.27 Aligned_cols=27 Identities=19% Similarity=0.136 Sum_probs=21.6
Q ss_pred HHHhCCCceeEEEEChHHHHHHHHHHh
Q psy5051 14 LSVTGQPKLSYIGHSMGTTMFWVLLSE 40 (87)
Q Consensus 14 ~~~~~~~~~~lvGHS~Gg~i~~~~a~~ 40 (87)
++..|.++-.++|||+|=..+++.+..
T Consensus 668 L~~~Gi~Pd~v~GHSlGE~aAa~aAGv 694 (2582)
T TIGR02813 668 FTQAGFKADMTAGHSFGELSALCAAGV 694 (2582)
T ss_pred HHHcCCccceeecCCHHHHHHHHHhCC
Confidence 455688888999999999888777644
No 284
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=34.18 E-value=83 Score=22.57 Aligned_cols=26 Identities=12% Similarity=0.120 Sum_probs=20.4
Q ss_pred HhCCCceeEEEEChHHHHHHHHHHhC
Q psy5051 16 VTGQPKLSYIGHSMGTTMFWVLLSEK 41 (87)
Q Consensus 16 ~~~~~~~~lvGHS~Gg~i~~~~a~~~ 41 (87)
+.+..+-.+.|-|.|+.++..+++..
T Consensus 92 e~gl~p~~i~GsSaGAivaa~~~~~t 117 (323)
T cd07231 92 EHQLLPRVIAGSSVGSIVCAIIATRT 117 (323)
T ss_pred HcCCCCCEEEEECHHHHHHHHHHcCC
Confidence 34555667999999999999888754
No 285
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=34.01 E-value=71 Score=18.14 Aligned_cols=38 Identities=24% Similarity=0.281 Sum_probs=25.8
Q ss_pred ccHHHHHHHHHHH---hCCCceeEEEEChHHHHHHHHHHhC
Q psy5051 4 YDLPVVIDYILSV---TGQPKLSYIGHSMGTTMFWVLLSEK 41 (87)
Q Consensus 4 ~D~~~~i~~v~~~---~~~~~~~lvGHS~Gg~i~~~~a~~~ 41 (87)
.++..+++++.+. .+.+++-++|-|-|=.++...++.+
T Consensus 21 ~~V~~qI~yvk~~~~~~GpK~VLViGaStGyGLAsRIa~aF 61 (78)
T PF12242_consen 21 RNVENQIEYVKSQGKINGPKKVLVIGASTGYGLASRIAAAF 61 (78)
T ss_dssp HHHHHHHHHHHHC---TS-SEEEEES-SSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCCceEEEEecCCcccHHHHHHHHh
Confidence 3567788888764 3457899999999988776555543
No 286
>COG0288 CynT Carbonic anhydrase [Inorganic ion transport and metabolism]
Probab=33.82 E-value=51 Score=21.92 Aligned_cols=34 Identities=18% Similarity=0.192 Sum_probs=27.4
Q ss_pred cHHHHHHHHHHHhCCCceeEEEEChHHHHHHHHH
Q psy5051 5 DLPVVIDYILSVTGQPKLSYIGHSMGTTMFWVLL 38 (87)
Q Consensus 5 D~~~~i~~v~~~~~~~~~~lvGHS~Gg~i~~~~a 38 (87)
+.-+.+++..+.++.+.+.++||+-=|++...+.
T Consensus 77 ~~l~sleyAv~~L~v~~IiV~GH~~CGav~aa~~ 110 (207)
T COG0288 77 SVLRSLEYAVYVLGVKEIIVCGHTDCGAVKAALD 110 (207)
T ss_pred chhHHHHHHHHHcCCCEEEEecCCCcHHHHhccc
Confidence 4556778888899999999999998887765443
No 287
>cd01066 APP_MetAP A family including aminopeptidase P, aminopeptidase M, and prolidase. Also known as metallopeptidase family M24. This family of enzymes is able to cleave amido-, imido- and amidino-containing bonds. Members exibit relatively narrow substrate specificity compared to other metallo-aminopeptidases, suggesting they play roles in regulation of biological processes rather than general protein degradation.
Probab=33.37 E-value=26 Score=21.78 Aligned_cols=26 Identities=19% Similarity=0.273 Sum_probs=17.9
Q ss_pred cHHHHHHHHHHHhCC--CceeEEEEChH
Q psy5051 5 DLPVVIDYILSVTGQ--PKLSYIGHSMG 30 (87)
Q Consensus 5 D~~~~i~~v~~~~~~--~~~~lvGHS~G 30 (87)
|+...++...+..+. ...+.+||+.|
T Consensus 130 ei~~~~~~~~~~~g~~~~~~~~~Gh~iG 157 (207)
T cd01066 130 EVDAAAREVLEEHGLGPNFGHRTGHGIG 157 (207)
T ss_pred HHHHHHHHHHHHcCccccCCCCCccccC
Confidence 555666666666654 35778999999
No 288
>TIGR02993 ectoine_eutD ectoine utilization protein EutD. Members of this family are putative peptidases or hydrolases similar to Xaa-Pro aminopeptidase (pfam00557). They belong to ectoine utilization operons, as found in Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. The exact function is unknown.
Probab=32.76 E-value=32 Score=24.71 Aligned_cols=27 Identities=26% Similarity=0.234 Sum_probs=19.8
Q ss_pred cHHHHHHHHHHHhCCCceeEEEEChHH
Q psy5051 5 DLPVVIDYILSVTGQPKLSYIGHSMGT 31 (87)
Q Consensus 5 D~~~~i~~v~~~~~~~~~~lvGHS~Gg 31 (87)
|+...+..+.+..|..+.+-.||+.|=
T Consensus 298 dv~~~~~~~~~~~G~~~~h~~GhgiGl 324 (391)
T TIGR02993 298 DIANAFFAVLKKYGIHKDSRTGYPIGL 324 (391)
T ss_pred HHHHHHHHHHHHcCCccCCCceeeecc
Confidence 566666677777777666788998883
No 289
>COG2453 CDC14 Predicted protein-tyrosine phosphatase [Signal transduction mechanisms]
Probab=31.91 E-value=49 Score=21.12 Aligned_cols=37 Identities=22% Similarity=0.208 Sum_probs=19.4
Q ss_pred cHHHHHHHHHHHhCCC-ceeE---EEEChHHHHHHHHHHhC
Q psy5051 5 DLPVVIDYILSVTGQP-KLSY---IGHSMGTTMFWVLLSEK 41 (87)
Q Consensus 5 D~~~~i~~v~~~~~~~-~~~l---vGHS~Gg~i~~~~a~~~ 41 (87)
|+...++.+.+..... ++.+ .|+|--|++...+...+
T Consensus 90 ~l~~~v~~i~~~~~~g~kVvVHC~~GigRSgtviaA~lm~~ 130 (180)
T COG2453 90 DLDKIVDFIEEALSKGKKVVVHCQGGIGRSGTVIAAYLMLY 130 (180)
T ss_pred HHHHHHHHHHHHHhcCCeEEEEcCCCCchHHHHHHHHHHHH
Confidence 5566666666655433 3322 45555556655454444
No 290
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2. PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=31.87 E-value=1.1e+02 Score=20.73 Aligned_cols=21 Identities=19% Similarity=0.083 Sum_probs=18.2
Q ss_pred eeEEEEChHHHHHHHHHHhCC
Q psy5051 22 LSYIGHSMGTTMFWVLLSEKP 42 (87)
Q Consensus 22 ~~lvGHS~Gg~i~~~~a~~~p 42 (87)
-.+.|=|.|+.++..+++..+
T Consensus 38 ~~i~G~SAGAl~aa~~a~g~~ 58 (249)
T cd07220 38 RKIYGASAGALTATALVTGVC 58 (249)
T ss_pred CeEEEEcHHHHHHHHHHcCCC
Confidence 457999999999999998765
No 291
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=31.45 E-value=1.1e+02 Score=21.60 Aligned_cols=25 Identities=16% Similarity=0.049 Sum_probs=19.7
Q ss_pred hCCCceeEEEEChHHHHHHHHHHhC
Q psy5051 17 TGQPKLSYIGHSMGTTMFWVLLSEK 41 (87)
Q Consensus 17 ~~~~~~~lvGHS~Gg~i~~~~a~~~ 41 (87)
.+..+=.+.|-|.|+.++..+++..
T Consensus 94 ~~l~~~~i~GtSaGAi~aa~~~~~~ 118 (298)
T cd07206 94 QDLLPRVISGSSAGAIVAALLGTHT 118 (298)
T ss_pred cCCCCCEEEEEcHHHHHHHHHHcCC
Confidence 4455567999999999999988653
No 292
>COG2201 CheB Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain [Cell motility and secretion / Signal transduction mechanisms]
Probab=31.37 E-value=82 Score=22.85 Aligned_cols=50 Identities=20% Similarity=0.210 Sum_probs=33.9
Q ss_pred CceeEEEEChHHHHHHHHHH-hCCchhhhhhheeeeccccccccCChHHHHHHHhhcCc
Q psy5051 20 PKLSYIGHSMGTTMFWVLLS-EKPEYNDKIEVMIGMAPIAFINHVKSPVIRFLATISDP 77 (87)
Q Consensus 20 ~~~~lvGHS~Gg~i~~~~a~-~~p~~~~~l~~~v~~~p~~~~~~~~~~~~~~l~~~~~~ 77 (87)
.++.++|=|-||-.++.... ..|. . +-.|...-+++...+.+.++.-+++
T Consensus 157 ~~iV~IGaStGGp~AL~~il~~lP~---~-----~p~pvvIvQHMp~gFt~s~a~~L~~ 207 (350)
T COG2201 157 RKIVAIGASTGGPAALRAVLPALPA---D-----FPAPVVIVQHMPPGFTASFADRLNR 207 (350)
T ss_pred ccEEEEEeCCCCHHHHHHHHHhCCC---C-----CCCCEEEEecCChhhhHHHHHHHhh
Confidence 47899999999999877543 3443 2 2236666777777777777765444
No 293
>cd06143 PAN2_exo DEDDh 3'-5' exonuclease domain of the eukaryotic exoribonuclease PAN2. PAN2 is the catalytic subunit of poly(A) nuclease (PAN), a Pab1p-dependent 3'-5' exoribonuclease which plays an important role in the posttranscriptional maturation of pre-mRNAs. PAN catalyzes the deadenylation of poly(A) tails, which are initially synthesized to default lengths of 70 to 90, to mRNA-specific lengths of 55 to 71. Pab1p and PAN also play a role in the export and decay of mRNA. PAN2 contains a DEDDh-type DnaQ-like 3'-5' exonuclease domain with three conserved sequence motifs termed ExoI, ExoII and ExoIII, with a specific Hx(4)D conserved pattern at ExoIII. These motifs are clustered around the active site and contain four conserved acidic residues that serve as ligands for the two metal ions required for catalysis.
Probab=30.47 E-value=78 Score=20.61 Aligned_cols=28 Identities=11% Similarity=0.150 Sum_probs=17.9
Q ss_pred HHHHHHHHHHHhCCCceeEEEEChHHHHH
Q psy5051 6 LPVVIDYILSVTGQPKLSYIGHSMGTTMF 34 (87)
Q Consensus 6 ~~~~i~~v~~~~~~~~~~lvGHS~Gg~i~ 34 (87)
+.+.-+.+.+..+ ..-.+||||+---+-
T Consensus 88 ~~~v~~~l~~li~-~~tILVGHsL~nDL~ 115 (174)
T cd06143 88 LKSAYLKLRLLVD-LGCIFVGHGLAKDFR 115 (174)
T ss_pred HHHHHHHHHHHcC-CCCEEEeccchhHHH
Confidence 4444555555444 356899999887664
No 294
>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3. PNPLA3 is a triacylglycerol lipase that mediates triacylglycerol hydrolysis in adipocytes and is an indicator of the nutritional state. PNPLA3 is also known as adiponutrin (ADPN) or iPLA2-epsilon. Human adiponutrins are bound to the cell membrane of adipocytes and show transacylase, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: ADPN (adiponutrin) from mammals, PNPLA3 (Patatin-like phospholipase domain-containing protein 3), and iPLA2-epsilon (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=30.39 E-value=1.4e+02 Score=20.36 Aligned_cols=21 Identities=29% Similarity=0.381 Sum_probs=18.3
Q ss_pred eeEEEEChHHHHHHHHHHhCC
Q psy5051 22 LSYIGHSMGTTMFWVLLSEKP 42 (87)
Q Consensus 22 ~~lvGHS~Gg~i~~~~a~~~p 42 (87)
-.+.|=|.|+.++..+++..+
T Consensus 34 ~~i~GtSAGAl~aa~~asg~~ 54 (252)
T cd07221 34 RMFFGASAGALHCVTFLSGLP 54 (252)
T ss_pred CEEEEEcHHHHHHHHHHhCCC
Confidence 358999999999999998765
No 295
>smart00864 Tubulin Tubulin/FtsZ family, GTPase domain. This domain is found in all tubulin chains, as well as the bacterial FtsZ family of proteins. These proteins are involved in polymer formation. Tubulin is the major component of microtubules, while FtsZ is the polymer-forming protein of bacterial cell division, it is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases, this entry is the GTPase domain. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in bacteria and archaea.
Probab=28.70 E-value=53 Score=21.11 Aligned_cols=26 Identities=19% Similarity=0.088 Sum_probs=17.5
Q ss_pred HHHHHHHHhCCCceeEEEEChHHHHH
Q psy5051 9 VIDYILSVTGQPKLSYIGHSMGTTMF 34 (87)
Q Consensus 9 ~i~~v~~~~~~~~~~lvGHS~Gg~i~ 34 (87)
..+.+++.......+++=||+||..+
T Consensus 72 ~~~~ir~~le~~d~~~i~~slgGGTG 97 (192)
T smart00864 72 SLDEIREELEGADGVFITAGMGGGTG 97 (192)
T ss_pred HHHHHHHHhcCCCEEEEeccCCCCcc
Confidence 33445555555578889999998663
No 296
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=28.32 E-value=1.3e+02 Score=18.51 Aligned_cols=19 Identities=21% Similarity=-0.005 Sum_probs=15.5
Q ss_pred CceeEEEEChHHHHHHHHH
Q psy5051 20 PKLSYIGHSMGTTMFWVLL 38 (87)
Q Consensus 20 ~~~~lvGHS~Gg~i~~~~a 38 (87)
.--++.|-|.|+.++..++
T Consensus 28 ~~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 28 CVTYLAGTSGGAWVAATLY 46 (155)
T ss_pred CCCEEEEEcHHHHHHHHHh
Confidence 4456789999999998877
No 297
>cd01090 Creatinase Creatine amidinohydrolase. E.C.3.5.3.3. Hydrolyzes creatine to sarcosine and urea.
Probab=27.87 E-value=41 Score=22.27 Aligned_cols=27 Identities=19% Similarity=0.267 Sum_probs=18.2
Q ss_pred cHHHHHHHHHHHhCCCc--eeEEEEChHH
Q psy5051 5 DLPVVIDYILSVTGQPK--LSYIGHSMGT 31 (87)
Q Consensus 5 D~~~~i~~v~~~~~~~~--~~lvGHS~Gg 31 (87)
|+.+.++.+.+..+..+ .+-+||+.|=
T Consensus 137 ~v~~a~~~~~~~~G~~~~~~~~~GHgiGl 165 (228)
T cd01090 137 DIAAELNEMYREHDLLRYRTFGYGHSFGV 165 (228)
T ss_pred HHHHHHHHHHHHcCCCcccccccCccccc
Confidence 55666667777766543 4568999984
No 298
>PF07643 DUF1598: Protein of unknown function (DUF1598); InterPro: IPR011487 This is a family of Rhodopirellula baltica hypothetical proteins of about 500 amino acids in length.
Probab=27.65 E-value=1.3e+02 Score=17.32 Aligned_cols=35 Identities=14% Similarity=0.190 Sum_probs=29.8
Q ss_pred cHHHHHHHHHHHhCCCceeEEEEChHHHHHHHHHH
Q psy5051 5 DLPVVIDYILSVTGQPKLSYIGHSMGTTMFWVLLS 39 (87)
Q Consensus 5 D~~~~i~~v~~~~~~~~~~lvGHS~Gg~i~~~~a~ 39 (87)
+...+++.+.+.+|.+.+.+.|-+..+..+..+..
T Consensus 28 ~~~~~~~~l~~~LG~QdV~V~Gip~~sh~ArvLVe 62 (84)
T PF07643_consen 28 GPAAWVDGLRQALGPQDVTVYGIPADSHFARVLVE 62 (84)
T ss_pred CHHHHHHHHHHHhCCceeEEEccCCccHHHHHHHH
Confidence 45667788888999999999999999999877664
No 299
>cd01092 APP-like Similar to Prolidase and Aminopeptidase P. The members of this subfamily presumably catalyse hydrolysis of Xaa-Pro dipeptides and/or release of any N-terminal amino acid, including proline, that is linked with proline.
Probab=26.35 E-value=41 Score=21.31 Aligned_cols=28 Identities=14% Similarity=0.306 Sum_probs=18.5
Q ss_pred ccHHHHHHHHHHHhCCCc--eeEEEEChHH
Q psy5051 4 YDLPVVIDYILSVTGQPK--LSYIGHSMGT 31 (87)
Q Consensus 4 ~D~~~~i~~v~~~~~~~~--~~lvGHS~Gg 31 (87)
.|+.+.++.+.+..+..+ .+..||+.|-
T Consensus 130 ~di~~~~~~~~~~~g~~~~~~~~~Gh~iG~ 159 (208)
T cd01092 130 KEVDKAARDVIEEAGYGEYFIHRTGHGVGL 159 (208)
T ss_pred HHHHHHHHHHHHHcCccccCCCCCccccCc
Confidence 356667777777666543 3458999884
No 300
>KOG1578|consensus
Probab=25.88 E-value=44 Score=23.44 Aligned_cols=28 Identities=18% Similarity=0.298 Sum_probs=23.7
Q ss_pred HHHHHHHHHhCCCceeEEEEChHHHHHH
Q psy5051 8 VVIDYILSVTGQPKLSYIGHSMGTTMFW 35 (87)
Q Consensus 8 ~~i~~v~~~~~~~~~~lvGHS~Gg~i~~ 35 (87)
+.+++....++.+++.++|||.=|.+..
T Consensus 142 AalE~aV~~lkvenIiv~ghs~cgGik~ 169 (276)
T KOG1578|consen 142 AALEYAVTTLKVENIIVIGHSLCGGIKG 169 (276)
T ss_pred chHHHHHHHhccceEEEeccccCCchhh
Confidence 6788888889999999999998776653
No 301
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=24.50 E-value=9.7 Score=29.55 Aligned_cols=42 Identities=26% Similarity=0.351 Sum_probs=34.2
Q ss_pred cccHHHHHHHHHHH--hCCCceeEEEEChHHHHHHHHHHhCCch
Q psy5051 3 IYDLPVVIDYILSV--TGQPKLSYIGHSMGTTMFWVLLSEKPEY 44 (87)
Q Consensus 3 ~~D~~~~i~~v~~~--~~~~~~~lvGHS~Gg~i~~~~a~~~p~~ 44 (87)
-+|+-++.+++.++ ...+++-+-|-|-||.+.-.....+||.
T Consensus 481 fdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQrPel 524 (648)
T COG1505 481 FDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPEL 524 (648)
T ss_pred hHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccChhh
Confidence 36888899888775 3346899999999999988888889984
No 302
>PF01872 RibD_C: RibD C-terminal domain; InterPro: IPR002734 This domain is found in the C terminus of the bifunctional deaminase-reductase of Escherichia coli, Bacillus subtilis and other bacteria in combination with IPR002125 from INTERPRO that catalyses the second and third steps in the biosynthesis of riboflavin, i.e., the deamination of 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate (deaminase) and the subsequent reduction of the ribosyl side chain (reductase) []. The domain is also present in some HTP reductases from archaea and fungi.; GO: 0008703 5-amino-6-(5-phosphoribosylamino)uracil reductase activity, 0009231 riboflavin biosynthetic process, 0055114 oxidation-reduction process; PDB: 3KY8_B 3KGY_B 2GD9_B 3JTW_B 2XW7_B 2D5N_B 2B3Z_A 3EX8_B 2AZN_A 2P4G_A ....
Probab=24.30 E-value=2e+02 Score=18.26 Aligned_cols=48 Identities=19% Similarity=0.293 Sum_probs=30.9
Q ss_pred cHHHHHHHHHHHhCCCceeEEEEChHHHHHHHHHHhCCchhhhhhheeeecccccc
Q psy5051 5 DLPVVIDYILSVTGQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPIAFI 60 (87)
Q Consensus 5 D~~~~i~~v~~~~~~~~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~~~~ 60 (87)
|+.+.++.+.++ +.+.+.+.| |+.+...+... +.++.+. +.++|....
T Consensus 122 dl~~~l~~L~~~-g~~~i~v~G---G~~l~~~~l~~--gLvDEl~--l~i~Pv~lG 169 (200)
T PF01872_consen 122 DLEEALRRLKER-GGKDILVEG---GGSLNGSFLRA--GLVDELS--LTIAPVLLG 169 (200)
T ss_dssp HHHHHHHHHHHT-TTSEEEEEE---HHHHHHHHHHT--T--SEEE--EEEESEE-S
T ss_pred CHHHHHHHHHhc-CCCEEEEec---hHHHHHHHHhC--CCCCEEE--EEEeeEEeC
Confidence 577888888887 888999988 77776666543 4555553 455675433
No 303
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=23.90 E-value=1.9e+02 Score=17.90 Aligned_cols=26 Identities=19% Similarity=0.111 Sum_probs=20.1
Q ss_pred hCCCceeEEEEChHHHHHHHHHHhCC
Q psy5051 17 TGQPKLSYIGHSMGTTMFWVLLSEKP 42 (87)
Q Consensus 17 ~~~~~~~lvGHS~Gg~i~~~~a~~~p 42 (87)
.+...=.+.|=|.|+.++..+++...
T Consensus 25 ~~~~~d~i~GtSaGal~a~~~a~g~~ 50 (175)
T cd07205 25 AGIPIDIVSGTSAGAIVGALYAAGYS 50 (175)
T ss_pred cCCCeeEEEEECHHHHHHHHHHcCCC
Confidence 34445578999999999999987653
No 304
>PF02044 Bombesin: Bombesin-like peptide; InterPro: IPR000874 Bombesin-like peptides comprise a large family of peptides which were initially isolated from amphibian skin, where they stimulate smooth muscle contraction. They were later found to be widely distributed in mammalian neural and endocrine cells. The amphibian peptides which belong to this family are currently classified into three subfamilies [, ]; the Bombesin group, which includes bombesin and alytesin; the Ranatensin group, which includes ranatensins, litorin, and Rohdei litorin; and the Phyllolitorin group, which includes Leu(8)- and Phe(8)-phyllolitorins. In mammals and birds two categories of bombesin-like peptides are known [, ], gastrin-releasing peptide (GRP), which stimulates the release of gastrin as well as other gastrointestinal hormones, and neuromedin B (NMB), a neuropeptide whose function is not yet clear. Bombesin-like peptides, like many other active peptides, are synthesized as larger protein precursors that are enzymatically converted to their mature forms. The final peptides are eight to fourteen residues long.; GO: 0007218 neuropeptide signaling pathway; PDB: 1C9A_A 1C98_A.
Probab=23.83 E-value=5.2 Score=15.22 Aligned_cols=8 Identities=50% Similarity=0.762 Sum_probs=3.4
Q ss_pred eEEEEChH
Q psy5051 23 SYIGHSMG 30 (87)
Q Consensus 23 ~lvGHS~G 30 (87)
+.+||=||
T Consensus 4 WAvGh~Mg 11 (14)
T PF02044_consen 4 WAVGHFMG 11 (14)
T ss_dssp CHHHCT--
T ss_pred cceeeeec
Confidence 34566665
No 305
>PRK09795 aminopeptidase; Provisional
Probab=23.81 E-value=45 Score=23.58 Aligned_cols=27 Identities=15% Similarity=0.271 Sum_probs=18.2
Q ss_pred cHHHHHHHHHHHhCCCc--eeEEEEChHH
Q psy5051 5 DLPVVIDYILSVTGQPK--LSYIGHSMGT 31 (87)
Q Consensus 5 D~~~~i~~v~~~~~~~~--~~lvGHS~Gg 31 (87)
|+.+.+..+.+..+..+ .+-+||+.|=
T Consensus 268 ~v~~~~~~~~~~~g~~~~~~h~~GHgiGl 296 (361)
T PRK09795 268 QVDDAARRVITEAGYGDYFGHNTGHAIGI 296 (361)
T ss_pred HHHHHHHHHHHHcCCCccCCCCCCccCCc
Confidence 55666666666666654 3668999983
No 306
>PLN03158 methionine aminopeptidase; Provisional
Probab=23.69 E-value=55 Score=23.97 Aligned_cols=29 Identities=28% Similarity=0.499 Sum_probs=20.1
Q ss_pred ccHHHHHHHHHHHhCCCce-eEEEEChHHH
Q psy5051 4 YDLPVVIDYILSVTGQPKL-SYIGHSMGTT 32 (87)
Q Consensus 4 ~D~~~~i~~v~~~~~~~~~-~lvGHS~Gg~ 32 (87)
.|+...++...+..+...+ ..+||+.|-.
T Consensus 277 ~dI~~~i~~~~~~~G~~~v~~~~GHGIG~~ 306 (396)
T PLN03158 277 REVGEVINRHATMSGLSVVKSYCGHGIGEL 306 (396)
T ss_pred HHHHHHHHHHHHHcCCCccCCccCCccccc
Confidence 3566677777777776543 5689999954
No 307
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=23.42 E-value=1.5e+02 Score=20.48 Aligned_cols=16 Identities=25% Similarity=0.301 Sum_probs=14.2
Q ss_pred EEEEChHHHHHHHHHH
Q psy5051 24 YIGHSMGTTMFWVLLS 39 (87)
Q Consensus 24 lvGHS~Gg~i~~~~a~ 39 (87)
+.|=|.||.+++.++.
T Consensus 45 i~GTStGgiiA~~la~ 60 (308)
T cd07211 45 ICGVSTGAILAFLLGL 60 (308)
T ss_pred EEecChhHHHHHHHhc
Confidence 5899999999998875
No 308
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=22.59 E-value=1e+02 Score=18.41 Aligned_cols=21 Identities=19% Similarity=-0.067 Sum_probs=16.1
Q ss_pred CceeEEEEChHHHHHHHHHHh
Q psy5051 20 PKLSYIGHSMGTTMFWVLLSE 40 (87)
Q Consensus 20 ~~~~lvGHS~Gg~i~~~~a~~ 40 (87)
.--.+.|=|.|+.++..++..
T Consensus 27 ~~d~i~GtS~Gal~a~~~~~~ 47 (204)
T PF01734_consen 27 RFDVISGTSAGALNAALLALG 47 (204)
T ss_dssp T-SEEEEECCHHHHHHHHHTC
T ss_pred CccEEEEcChhhhhHHHHHhC
Confidence 344679999999999887765
No 309
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=22.07 E-value=1e+02 Score=21.15 Aligned_cols=20 Identities=20% Similarity=0.189 Sum_probs=16.7
Q ss_pred eEEEEChHHHHHHHHHHhCC
Q psy5051 23 SYIGHSMGTTMFWVLLSEKP 42 (87)
Q Consensus 23 ~lvGHS~Gg~i~~~~a~~~p 42 (87)
.+.|=|.||.++..++...+
T Consensus 37 ~i~GTSaGaiia~~la~g~~ 56 (288)
T cd07213 37 LFAGTSAGSLIALGLALGYS 56 (288)
T ss_pred EEEEeCHHHHHHHHHHcCcC
Confidence 56999999999999987653
No 310
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=21.83 E-value=94 Score=22.96 Aligned_cols=21 Identities=19% Similarity=0.227 Sum_probs=16.9
Q ss_pred CCceeEEEEChHHHHHHHHHH
Q psy5051 19 QPKLSYIGHSMGTTMFWVLLS 39 (87)
Q Consensus 19 ~~~~~lvGHS~Gg~i~~~~a~ 39 (87)
..++++.|.|-||..+-.++.
T Consensus 164 ~~~~yi~GESYaG~yvP~la~ 184 (433)
T PLN03016 164 SNPLYVVGDSYSGMIVPALVQ 184 (433)
T ss_pred CCCEEEEccCccceehHHHHH
Confidence 468999999999987666554
No 311
>PRK11789 N-acetyl-anhydromuranmyl-L-alanine amidase; Provisional
Probab=21.66 E-value=90 Score=20.42 Aligned_cols=24 Identities=17% Similarity=0.058 Sum_probs=16.7
Q ss_pred HHHHHHHHHHHhCCCceeEEEECh
Q psy5051 6 LPVVIDYILSVTGQPKLSYIGHSM 29 (87)
Q Consensus 6 ~~~~i~~v~~~~~~~~~~lvGHS~ 29 (87)
+..++.+++++.+...-.++||+-
T Consensus 135 L~~L~~~L~~~y~i~~~~IvGH~d 158 (185)
T PRK11789 135 LAALTRALRAAYPIIAERITGHSD 158 (185)
T ss_pred HHHHHHHHHHHcCCCHHhEEehhh
Confidence 344566667777765678999974
No 312
>PF13289 SIR2_2: SIR2-like domain
Probab=21.58 E-value=1.5e+02 Score=17.29 Aligned_cols=21 Identities=24% Similarity=0.426 Sum_probs=14.5
Q ss_pred HHHHHhCCCceeEEEEChHHH
Q psy5051 12 YILSVTGQPKLSYIGHSMGTT 32 (87)
Q Consensus 12 ~v~~~~~~~~~~lvGHS~Gg~ 32 (87)
.+.+......+.++|+|++=.
T Consensus 79 ~l~~~l~~~~~lfiGys~~D~ 99 (143)
T PF13289_consen 79 FLRSLLRSKTLLFIGYSFNDP 99 (143)
T ss_pred HHHHHHcCCCEEEEEECCCCH
Confidence 334455567899999997643
No 313
>cd07217 Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=21.19 E-value=1.1e+02 Score=21.85 Aligned_cols=19 Identities=16% Similarity=0.018 Sum_probs=15.7
Q ss_pred eEEEEChHHHHHHHHHHhC
Q psy5051 23 SYIGHSMGTTMFWVLLSEK 41 (87)
Q Consensus 23 ~lvGHS~Gg~i~~~~a~~~ 41 (87)
.+.|-|.||.++..++..+
T Consensus 44 lIaGTStGgIIAa~la~g~ 62 (344)
T cd07217 44 FVGGTSTGSIIAACIALGM 62 (344)
T ss_pred EEEEecHHHHHHHHHHcCC
Confidence 4589999999999987643
No 314
>KOG1387|consensus
Probab=21.01 E-value=31 Score=25.44 Aligned_cols=26 Identities=12% Similarity=0.377 Sum_probs=18.4
Q ss_pred hCCCceeEEEEChHHHH-HHHHHHhCC
Q psy5051 17 TGQPKLSYIGHSMGTTM-FWVLLSEKP 42 (87)
Q Consensus 17 ~~~~~~~lvGHS~Gg~i-~~~~a~~~p 42 (87)
..+..+.++|.|.|+++ ++....++|
T Consensus 124 ~~~~hfTllgQaigsmIl~~Eai~r~~ 150 (465)
T KOG1387|consen 124 STWKHFTLLGQAIGSMILAFEAIIRFP 150 (465)
T ss_pred ccccceehHHHHHHHHHHHHHHHHhCC
Confidence 45678899999999998 344444443
No 315
>cd00455 nuc_hydro nuc_hydro: Nucleoside hydrolases. Nucleoside hydrolases cleave the N-glycosidic bond in nucleosides generating ribose and the respective base. These enzymes vary in their substrate specificity. This group contains eukaryotic, bacterial and archeal proteins similar to the inosine-uridine preferring nucleoside hydrolase from Crithidia fasciculata, the xanthosine-inosine-uridine-adenosine-preferring nucleoside hydrolase RihC from Salmonella enterica serovar Typhimurium, the purine-specific inosine-adenosine-guanosine-preferring nucleoside hydrolase from Trypanosoma vivax and, pyrimidine-specific uridine-cytidine preferring nucleoside hydrolases such as URH1 from Saccharomyces cerevisiae, RihA and RihB from Escherichia coli. Nucleoside hydrolases are of interest as a target for antiprotozoan drugs as, no nucleoside hydrolase activity or genes encoding these enzymes have been detected in humans and, parasitic protozoans lack de novo purine synthesis relying on nucleosid
Probab=20.85 E-value=2.8e+02 Score=19.11 Aligned_cols=36 Identities=11% Similarity=0.269 Sum_probs=24.3
Q ss_pred ceeEEEEChHHHHHHHHHHhCCchhhhhhheeeeccc
Q psy5051 21 KLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPI 57 (87)
Q Consensus 21 ~~~lvGHS~Gg~i~~~~a~~~p~~~~~l~~~v~~~p~ 57 (87)
++.++.-.-=+.++..+. .+|+..++++.++.++..
T Consensus 113 ~v~ila~GplTNlA~al~-~~p~~~~~i~~iviMGG~ 148 (295)
T cd00455 113 EITIVALGPLTNLAMAFI-LDPDIKDRVKEIVIMGGA 148 (295)
T ss_pred CeEEEECCchHHHHHHHH-HChHHHHhCCEEEEcCCc
Confidence 677765444444554443 489988899989988754
No 316
>KOG2308|consensus
Probab=20.85 E-value=22 Score=28.23 Aligned_cols=22 Identities=36% Similarity=0.640 Sum_probs=18.2
Q ss_pred CceeEEEEChHHHHHHHHHHhC
Q psy5051 20 PKLSYIGHSMGTTMFWVLLSEK 41 (87)
Q Consensus 20 ~~~~lvGHS~Gg~i~~~~a~~~ 41 (87)
.++.+.|||+|+.+.+-.....
T Consensus 417 G~Vsi~gHSLGSvit~Dil~~q 438 (741)
T KOG2308|consen 417 GKVSIAGHSLGSVITYDILSHQ 438 (741)
T ss_pred CceeeccCCCCceEEEeecccc
Confidence 5799999999999987766554
No 317
>cd02201 FtsZ_type1 FtsZ is a GTPase that is similar to the eukaryotic tubulins and is essential for cell division in prokaryotes. FtsZ is capable of polymerizing in a GTP-driven process into structures similar to those formed by tubulin. FtsZ forms a ring-shaped septum at the site of bacterial cell division, which is required for constriction of cell membrane and cell envelope to yield two daughter cells.
Probab=20.67 E-value=1.2e+02 Score=21.11 Aligned_cols=29 Identities=14% Similarity=0.012 Sum_probs=19.0
Q ss_pred HHHHHHHHhCCCceeEEEEChHHHHHHHH
Q psy5051 9 VIDYILSVTGQPKLSYIGHSMGTTMFWVL 37 (87)
Q Consensus 9 ~i~~v~~~~~~~~~~lvGHS~Gg~i~~~~ 37 (87)
..+.+++........++-|||||..+.-+
T Consensus 74 ~~~~I~~~l~~~d~v~i~aglGGGTGSG~ 102 (304)
T cd02201 74 SREEIKEALEGADMVFITAGMGGGTGTGA 102 (304)
T ss_pred HHHHHHHHHhCCCEEEEeeccCCCcchhH
Confidence 33445555555567789999998775443
No 318
>PF15566 Imm18: Immunity protein 18
Probab=20.67 E-value=99 Score=16.16 Aligned_cols=24 Identities=4% Similarity=-0.003 Sum_probs=17.0
Q ss_pred HHHHHHHhCCCceeEEEEChHHHH
Q psy5051 10 IDYILSVTGQPKLSYIGHSMGTTM 33 (87)
Q Consensus 10 i~~v~~~~~~~~~~lvGHS~Gg~i 33 (87)
+..+.+....+..+++-.||||--
T Consensus 11 l~~L~~~~~~~H~Hlmtp~WgG~E 34 (52)
T PF15566_consen 11 LENLQEKEPFDHEHLMTPDWGGEE 34 (52)
T ss_pred HHHHHhccCCCCceeccccccccc
Confidence 334444445678999999999964
No 319
>PRK14576 putative endopeptidase; Provisional
Probab=20.59 E-value=56 Score=23.64 Aligned_cols=30 Identities=17% Similarity=0.243 Sum_probs=20.5
Q ss_pred cHHHHHHHHHHHhCCCce--eEEEEChHHHHH
Q psy5051 5 DLPVVIDYILSVTGQPKL--SYIGHSMGTTMF 34 (87)
Q Consensus 5 D~~~~i~~v~~~~~~~~~--~lvGHS~Gg~i~ 34 (87)
|+...++.+.+..+..+. +.+|||.|..+.
T Consensus 312 dv~~a~~~~~~~~G~~~~~~~~~GHgiG~~l~ 343 (405)
T PRK14576 312 AVFDSTMAVIKTSGLPHYNRGHLGHGDGVFLG 343 (405)
T ss_pred HHHHHHHHHHHHcCCccccCCCCCCCCCCCCC
Confidence 556666677777776544 569999996543
No 320
>TIGR00065 ftsZ cell division protein FtsZ. This family consists of cell division protein FtsZ, a GTPase found in bacteria, the chloroplast of plants, and in archaebacteria. Structurally similar to tubulin, FtsZ undergoes GTP-dependent polymerization into filaments that form a cytoskeleton involved in septum synthesis.
Probab=20.20 E-value=1.3e+02 Score=21.56 Aligned_cols=29 Identities=17% Similarity=0.052 Sum_probs=18.2
Q ss_pred HHHHHHHHhCCCceeEEEEChHHHHHHHH
Q psy5051 9 VIDYILSVTGQPKLSYIGHSMGTTMFWVL 37 (87)
Q Consensus 9 ~i~~v~~~~~~~~~~lvGHS~Gg~i~~~~ 37 (87)
..+.+++........++-|||||..+.-+
T Consensus 91 ~~d~Ir~~le~~D~vfI~aglGGGTGSG~ 119 (349)
T TIGR00065 91 SRDEIRKLLEGADMVFITAGMGGGTGTGA 119 (349)
T ss_pred HHHHHHHHHhCCCEEEEEEeccCccchhH
Confidence 33445555555556688899998764433
Done!