RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy5051
         (87 letters)



>d1k8qa_ c.69.1.6 (A:) Gastric lipase {Dog (Canis familiaris)
           [TaxId: 9615]}
          Length = 377

 Score = 48.2 bits (113), Expect = 1e-08
 Identities = 29/86 (33%), Positives = 47/86 (54%)

Query: 1   MGIYDLPVVIDYILSVTGQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPIAFI 60
           M  YDLP  ID+IL  TGQ KL Y+GHS GTT+ ++  S  P+   +I+    +AP+A +
Sbjct: 126 MAKYDLPATIDFILKKTGQDKLHYVGHSQGTTIGFIAFSTNPKLAKRIKTFYALAPVATV 185

Query: 61  NHVKSPVIRFLATISDPLAVSNRFPI 86
            + ++ + + +   S    +     I
Sbjct: 186 KYTETLINKLMLVPSFLFKLIFGNKI 211


>d1tcaa_ c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Candida
           antarctica), form b [TaxId: 34362]}
          Length = 317

 Score = 37.8 bits (87), Expect = 4e-05
 Identities = 11/52 (21%), Positives = 22/52 (42%)

Query: 5   DLPVVIDYILSVTGQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAP 56
            +   I  + + +G  KL  +  S G  +    L+  P    K++ ++  AP
Sbjct: 82  YMVNAITALYAGSGNNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAP 133


>d1ex9a_ c.69.1.18 (A:) Lipase {Pseudomonas aeruginosa [TaxId: 287]}
          Length = 285

 Score = 29.7 bits (66), Expect = 0.030
 Identities = 13/51 (25%), Positives = 26/51 (50%), Gaps = 1/51 (1%)

Query: 3   IYDLPVVIDYILSVTGQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIG 53
              L   ++ I++++GQPK++ IGHS G      + + +P+        +G
Sbjct: 57  GEQLLQQVEEIVALSGQPKVNLIGHSHGGPTIRYVAAVRPDLIASA-TSVG 106


>d1qoza_ c.69.1.30 (A:) Acetylxylan esterase {Trichoderma reesei
           [TaxId: 51453]}
          Length = 207

 Score = 25.4 bits (55), Expect = 0.99
 Identities = 13/81 (16%), Positives = 27/81 (33%), Gaps = 5/81 (6%)

Query: 2   GIYDLPVVIDYILSVTGQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPIAFIN 61
           G       I+   +     +L  +G+S G  +F   L    +  + I           ++
Sbjct: 64  GTNAAAAAINNFHNSCPDTQLVLVGYSQGAQIFDNALCGGGDPGEGITNTAVPLTAGAVS 123

Query: 62  HVKSPVIRFLATISDPLAVSN 82
            VK+ +      + DP  +  
Sbjct: 124 AVKAAI-----FMGDPRNIHG 139


>d1jqga1 c.56.5.1 (A:1-310) Carboxypeptidase A {Cotton bollworm
           (Helicoverpa armigera) [TaxId: 29058]}
          Length = 317

 Score = 24.0 bits (51), Expect = 2.7
 Identities = 13/58 (22%), Positives = 22/58 (37%)

Query: 8   VVIDYILSVTGQPKLSYIGHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPIAFINHVKS 65
           V+ D I     +  L    HS G+ + +   +     N     +IG+     I+ VK 
Sbjct: 178 VIRDIIAEHRNRMALYLDIHSFGSMILYGYGNGVLPSNALQLHLIGVQMAQAIDRVKW 235


>d1svba2 f.10.1.1 (A:1-302) Envelope glycoprotein {Tick-borne
           encephalitis virus [TaxId: 11084]}
          Length = 302

 Score = 23.6 bits (51), Expect = 4.7
 Identities = 9/41 (21%), Positives = 12/41 (29%)

Query: 33  MFWVLLSEKPEYNDKIEVMIGMAPIAFINHVKSPVIRFLAT 73
              V  + K  Y  K+E   G    A   H       F  +
Sbjct: 128 TGHVYDANKIVYTVKVEPHTGDYVAANETHSGRKTASFTIS 168


>d1sfra_ c.69.1.3 (A:) Antigen 85a {Mycobacterium tuberculosis
           [TaxId: 1773]}
          Length = 288

 Score = 23.0 bits (48), Expect = 7.1
 Identities = 5/36 (13%), Positives = 11/36 (30%), Gaps = 3/36 (8%)

Query: 26  GHSMGTTMFWVLLSEKPEYNDKIEVMIGMAPIAFIN 61
           G SM  +    L      +  +      M+ +   +
Sbjct: 125 GLSMAASSALTLAI---YHPQQFVYAGAMSGLLDPS 157


>d1zkea1 a.30.6.1 (A:1-79) Hypothetical protein HP1531
          {Helicobacter pylori [TaxId: 210]}
          Length = 79

 Score = 22.1 bits (47), Expect = 8.2
 Identities = 4/27 (14%), Positives = 18/27 (66%)

Query: 37 LLSEKPEYNDKIEVMIGMAPIAFINHV 63
          +L++  +  ++IE+++ +A ++  + +
Sbjct: 8  ILADIEDSQNEIEMLLKLANLSLGDFI 34


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.325    0.142    0.425 

Gapped
Lambda     K      H
   0.267   0.0612    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 331,008
Number of extensions: 12428
Number of successful extensions: 37
Number of sequences better than 10.0: 1
Number of HSP's gapped: 37
Number of HSP's successfully gapped: 10
Length of query: 87
Length of database: 2,407,596
Length adjustment: 52
Effective length of query: 35
Effective length of database: 1,693,636
Effective search space: 59277260
Effective search space used: 59277260
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 47 (22.1 bits)