Query psy5058
Match_columns 377
No_of_seqs 275 out of 1743
Neff 7.1
Searched_HMMs 29240
Date Sat Aug 17 00:39:09 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5058.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/5058hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3uvj_A Guanylate cyclase solub 100.0 1.8E-40 6.2E-45 307.7 19.9 175 200-377 4-178 (225)
2 2wz1_A Guanylate cyclase solub 100.0 3.4E-39 1.2E-43 298.1 19.6 174 200-377 2-186 (219)
3 1ab8_A Adenylyl cyclase; lyase 100.0 1.5E-39 5.3E-44 300.5 16.9 176 199-377 3-195 (220)
4 3et6_A Soluble guanylyl cyclas 100.0 8.7E-39 3E-43 288.1 19.1 171 204-377 3-174 (190)
5 2w01_A Adenylate cyclase; guan 100.0 7.2E-38 2.5E-42 286.6 19.4 171 204-377 8-181 (208)
6 1yk9_A Adenylate cyclase; beta 100.0 3.7E-39 1.3E-43 294.6 10.6 170 203-377 3-172 (204)
7 3r5g_A CYAB; adenylyl cyclase, 100.0 4.8E-38 1.7E-42 284.8 15.8 172 204-377 3-179 (198)
8 1azs_A VC1; complex (lyase/hyd 100.0 2.6E-38 8.9E-43 292.5 14.2 165 202-371 26-190 (220)
9 1wc3_A Adenylate cyclase; solu 100.0 1.3E-36 4.3E-41 280.8 18.2 173 202-377 19-201 (219)
10 1y10_A Hypothetical protein RV 100.0 2.9E-35 9.8E-40 294.2 21.5 182 174-377 160-363 (407)
11 1ybt_A Hydrolase, alpha/beta h 100.0 4.3E-35 1.5E-39 263.6 16.2 156 202-377 9-164 (184)
12 1fx2_A Receptor-type adenylate 100.0 4.7E-35 1.6E-39 272.3 16.0 167 201-377 3-205 (235)
13 3mr7_A Adenylate/guanylate cyc 100.0 1.5E-33 5.2E-38 253.9 16.7 157 205-377 2-159 (189)
14 3hls_A Guanylate cyclase solub 97.5 0.00076 2.6E-08 49.7 9.1 44 157-200 23-66 (66)
15 3i5c_A Fusion of general contr 96.0 0.28 9.6E-06 42.4 16.0 59 210-268 61-119 (206)
16 2qv6_A MJ0145, GTP cyclohydrol 94.2 0.25 8.7E-06 46.0 10.0 62 207-268 128-190 (268)
17 3pjx_A Cyclic dimeric GMP bind 92.5 1.8 6.1E-05 42.3 13.8 99 208-312 46-147 (430)
18 3hva_A Protein FIMX; ggdef dig 91.8 0.63 2.1E-05 39.0 8.4 78 210-294 44-121 (177)
19 3mtk_A Diguanylate cyclase/pho 90.8 1.2 4.2E-05 37.6 9.3 59 209-268 35-93 (178)
20 3ign_A Diguanylate cyclase; gg 90.6 1.4 4.8E-05 36.9 9.4 96 210-312 39-135 (177)
21 3tvk_A DGC, diguanylate cyclas 90.2 0.97 3.3E-05 39.2 8.2 96 210-312 33-129 (179)
22 3icl_A EAL/ggdef domain protei 89.8 1.5 5E-05 36.4 8.8 59 209-268 29-87 (171)
23 3ezu_A Ggdef domain protein; m 89.8 3.6 0.00012 39.1 12.6 96 209-314 212-307 (342)
24 3qyy_A Response regulator; C-D 89.1 2.9 0.0001 34.5 10.2 57 210-267 42-98 (167)
25 3bre_A Probable two-component 89.1 2.5 8.4E-05 39.7 10.8 59 210-268 202-260 (358)
26 3hvw_A Diguanylate-cyclase (DG 87.4 0.91 3.1E-05 38.4 5.9 57 210-268 27-86 (176)
27 4akk_A Nitrate regulatory prot 83.8 11 0.00036 37.2 12.4 58 75-132 262-319 (423)
28 1w25_A Stalked-cell differenti 83.4 4.9 0.00017 39.2 9.8 97 209-312 318-417 (459)
29 3ung_C CMR2DHD; ferredoxin fol 68.9 23 0.00078 37.0 10.0 96 231-347 465-562 (693)
30 3hvb_A Protein FIMX; EAL phosp 41.7 5.5 0.00019 38.9 0.0 60 208-268 42-101 (437)
31 2qv6_A MJ0145, GTP cyclohydrol 32.5 97 0.0033 28.5 6.9 56 213-268 4-62 (268)
No 1
>3uvj_A Guanylate cyclase soluble subunit alpha-3; nitric oxide, structural genomics, structural genomics conso SGC, CGMP biosynthesis; 2.08A {Homo sapiens}
Probab=100.00 E-value=1.8e-40 Score=307.71 Aligned_cols=175 Identities=43% Similarity=0.679 Sum_probs=162.4
Q ss_pred cCCCCCCceeeEEEEEEEcCCchhHhhhCChHHHHHHHHHHHHHHHHHhhhCCeEEEEEeCCeEEEEeCCCCCCCchhHH
Q psy5058 200 TQQVPAEYYEAVTVYFSDIVGFTEIAAVSTPLEVVNFLNSIYKLFDARIEGYDVYKVETIGDSYMVASGLPMKNGDKHVS 279 (377)
Q Consensus 200 ~~~~~~~~~~~vTVLF~DI~gFT~ls~~~~p~elv~lLn~~~~~~~~ii~~~gG~~ik~iGD~~ma~fG~p~~~~d~~a~ 279 (377)
++...+++++++||||+||+|||.+++.++|++++.+||+||..+++++.+|||+++|++||++||+||+|.+..+ |+.
T Consensus 4 g~~~~~~~~~~vtvlF~Di~gfT~l~~~~~~~~~~~~ln~~~~~~~~~i~~~~g~v~k~~GD~~ma~fg~p~~~~~-~a~ 82 (225)
T 3uvj_A 4 GQVVQAKKFSNVTMLFSDIVGFTAICSQCSPLQVITMLNALYTRFDQQCGELDVYKVETIGDAYCVAGGLHKESDT-HAV 82 (225)
T ss_dssp -CEEEEEEEEEEEEEEEEETTHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHTCEEECCSTTCEEEEESSSSCCTT-HHH
T ss_pred CCccCCcccceEEEEEEEccChHHHHhcCCHHHHHHHHHHHHHHHHHHHHhcCeEEEEeeCcEEEEEECCCCCchH-HHH
Confidence 4455677899999999999999999999999999999999999999999999999999999999999999988776 999
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCceeEEEEeeeccEEEEEeCCCCCcceeeCcHHHHHHHHHhcCCCCcEEeCHHHHHH
Q psy5058 280 EIATMALDLLAGSIMFPIPHRKNERVQIRSGMHTGPVVAGIVGTKMPRYCLFGDTVNTASRMESTGEALKIHISAEVKEA 359 (377)
Q Consensus 280 ~a~~aAl~i~~~~~~~~~~~~~~~~l~irIGIhtG~vv~G~iGs~~~~y~v~GdtVNiAsRLes~a~~g~I~VS~~t~~~ 359 (377)
+|+.||++|++.+..++.+ .+.++++|||||+|+|++|++|+++++||+|||+||+|+|||+.+++++|+||++|++.
T Consensus 83 ~a~~~al~~~~~~~~~~~~--~~~~l~~riGih~G~v~~G~iG~~~~~~~~~Gd~VN~AaRle~~a~~~~I~vS~~~~~~ 160 (225)
T 3uvj_A 83 QIALMALKMMELSDEVMSP--HGEPIKMRIGLHSGSVFAGVVGVKMPRYCLFGNNVTLANKFESCSVPRKINVSPTTYRL 160 (225)
T ss_dssp HHHHHHHHHHHHHTTSBCT--TSCBCCEEEEEEEEEEEEEEECC-CCEEEEESHHHHHHHHHHHTSCTTCEEECHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhh--cCCceEEEEEEEeccEEEEEecCCCceEEEECcHHHHHHHHHhcCCCCeEEECHHHHHh
Confidence 9999999999998877643 35789999999999999999999888999999999999999999999999999999999
Q ss_pred hhccCCeeEEEcccccCC
Q psy5058 360 LDVIGGFRTEHRGSNYTK 377 (377)
Q Consensus 360 l~~~~~f~~~~~G~i~vK 377 (377)
+.+..+|.++++|.+.+|
T Consensus 161 l~~~~~~~~~~~g~~~lk 178 (225)
T 3uvj_A 161 LKDCPGFVFTPRSREELP 178 (225)
T ss_dssp HTTSTTEEEEECCSTTSC
T ss_pred hcCCCceEEEEcCcEEec
Confidence 998668999999999884
No 2
>2wz1_A Guanylate cyclase soluble subunit beta-1; lyase, GUCY1, metal-binding, CGMP biosynthesis, nucleotide-B cyclase, GUCY1B3, GTP-binding; 1.63A {Homo sapiens} PDB: 3uvj_B
Probab=100.00 E-value=3.4e-39 Score=298.11 Aligned_cols=174 Identities=44% Similarity=0.708 Sum_probs=160.0
Q ss_pred cCCCCCCceeeEEEEEEEcCCchhHhhhCC----hHHHHHHHHHHHHHHHHHhh---hCCeEEEEEeCCeEEEEeCCCCC
Q psy5058 200 TQQVPAEYYEAVTVYFSDIVGFTEIAAVST----PLEVVNFLNSIYKLFDARIE---GYDVYKVETIGDSYMVASGLPMK 272 (377)
Q Consensus 200 ~~~~~~~~~~~vTVLF~DI~gFT~ls~~~~----p~elv~lLn~~~~~~~~ii~---~~gG~~ik~iGD~~ma~fG~p~~ 272 (377)
|+...+++++++||||+||+|||.+++.++ |++++.+||+||..+++++. .|+|+++|++||++||+||.|.+
T Consensus 2 G~~~~~~~~~~vtvlF~DI~gfT~l~e~~~~~~~~~~~~~~Ln~~~~~~~~~i~~~~~~~g~~~k~~GD~~ma~fg~p~~ 81 (219)
T 2wz1_A 2 KRPVPAKRYDNVTILFSGIVGFNAFCSKHASGEGAMKIVNLLNDLYTRFDTLTDSRKNPFVYKVETVGDKYMTVSGLPEP 81 (219)
T ss_dssp ---CCCEEEEEEEEEEEEETTHHHHHHHSCCC--HHHHHHHHHHHHHHHHHHHCTTTCTTCEEECCCTTCEEEEESSSSC
T ss_pred CCccCccceeeEEEEEEEccCcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHhhccCCEEEEeecCCEEEEEECCCCC
Confidence 456678899999999999999999999999 99999999999999999999 88999999999999999999998
Q ss_pred CCchhHHHHHHHHHHHHHhhccCCCCCCCCCceeEEEEeeeccEEEEEeCCCCCcceeeCcHHHHHHHHHhcCCCCcEEe
Q psy5058 273 NGDKHVSEIATMALDLLAGSIMFPIPHRKNERVQIRSGMHTGPVVAGIVGTKMPRYCLFGDTVNTASRMESTGEALKIHI 352 (377)
Q Consensus 273 ~~d~~a~~a~~aAl~i~~~~~~~~~~~~~~~~l~irIGIhtG~vv~G~iGs~~~~y~v~GdtVNiAsRLes~a~~g~I~V 352 (377)
.++ |+.+|++||++|++.+..++. ...++.+|||||+|+|++|++|+.+++|++|||+||+|+|||+.+++++|+|
T Consensus 82 ~~~-~a~~A~~~Al~~~~~~~~~~~---~~~~l~~rIGi~~G~v~~G~iG~~~~~~~v~Gd~VN~AaRLe~~a~~~~Ilv 157 (219)
T 2wz1_A 82 CIH-HARSICHLALDMMEIAGQVQV---DGESVQITIGIHTGEVVTGVIGQRMPRYCLFGNTVNLTSRTETTGEKGKINV 157 (219)
T ss_dssp CTT-HHHHHHHHHHHHHHHHTTCEE---TTEECCEEEEEEEEEEEEEEECSSSCEEEEESHHHHHHHHHHHTSCTTSEEE
T ss_pred Chh-HHHHHHHHHHHHHHHHHHHhc---cCCceEEEEEEEEEEEEEEEeCCCceEEEEECHHHHHHHHHHhcCCCCeEEE
Confidence 876 999999999999999988753 2678999999999999999999987799999999999999999999999999
Q ss_pred CHHHHHHhh----ccCCeeEEEcccccCC
Q psy5058 353 SAEVKEALD----VIGGFRTEHRGSNYTK 377 (377)
Q Consensus 353 S~~t~~~l~----~~~~f~~~~~G~i~vK 377 (377)
|+++++.+. ....|.++++|.+.+|
T Consensus 158 S~~~~~~l~~~~~~~~~~~~~~~g~~~lK 186 (219)
T 2wz1_A 158 SEYTYRCLMSPENSDPQFHLEHRGPVSMK 186 (219)
T ss_dssp EHHHHHHTTSTTTCCTTEEEEEEEEECCT
T ss_pred CHHHHHHHhhhcccCCceEEEEeCCEEec
Confidence 999999997 2247999999999987
No 3
>1ab8_A Adenylyl cyclase; lyase, complex (transferase-inhibitor); HET: FOK; 2.20A {Rattus norvegicus} SCOP: d.58.29.1 PDB: 1azs_B* 1cjk_B* 1cjt_B* 1cju_B* 1cjv_B* 1cs4_B* 1tl7_B* 1u0h_B* 2gvd_B* 2gvz_B* 3c14_B* 3c15_B* 3c16_B* 3e8a_B* 3g82_B* 3maa_B* 1cul_B*
Probab=100.00 E-value=1.5e-39 Score=300.47 Aligned_cols=176 Identities=32% Similarity=0.526 Sum_probs=151.0
Q ss_pred ccCCCCCCceeeEEEEEEEcCCchhHhhhCC----hHHHHHHHHHHHHHHHHHhhhC---CeEEEEEeCCeEEEEeCCCC
Q psy5058 199 QTQQVPAEYYEAVTVYFSDIVGFTEIAAVST----PLEVVNFLNSIYKLFDARIEGY---DVYKVETIGDSYMVASGLPM 271 (377)
Q Consensus 199 ~~~~~~~~~~~~vTVLF~DI~gFT~ls~~~~----p~elv~lLn~~~~~~~~ii~~~---gG~~ik~iGD~~ma~fG~p~ 271 (377)
+++....++++++||||+||+|||.+++.++ |++++.+||++|..|++++.+| ||+++|++||+|||+||+|.
T Consensus 3 ~~~~~~~~~~~~vtvlF~DI~gfT~l~~~l~~~~~p~~~~~~Ln~~~~~~~~~i~~~~~~g~~~ik~iGD~~ma~fg~p~ 82 (220)
T 1ab8_A 3 KNEELYHQSYDCVCVMFASIPDFKEFYTESDVNKEGLECLRLLNEIIADFDDLLSKPKFSGVEKIKTIGSTYMAATGLSA 82 (220)
T ss_dssp ----CCEEEEEEEEEEEEECTTHHHHCCCSTTTTTTHHHHHHHHHHHHHHHGGGGSGGGTTEEEEEEETTEEEEEECCCC
T ss_pred CCCcccccccCcEEEEEEEccchHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEEeCceEEEEECCCc
Confidence 4566778899999999999999999999875 7899999999999999999987 89999999999999999997
Q ss_pred C----------CCchhHHHHHHHHHHHHHhhccCCCCCCCCCceeEEEEeeeccEEEEEeCCCCCcceeeCcHHHHHHHH
Q psy5058 272 K----------NGDKHVSEIATMALDLLAGSIMFPIPHRKNERVQIRSGMHTGPVVAGIVGTKMPRYCLFGDTVNTASRM 341 (377)
Q Consensus 272 ~----------~~d~~a~~a~~aAl~i~~~~~~~~~~~~~~~~l~irIGIhtG~vv~G~iGs~~~~y~v~GdtVNiAsRL 341 (377)
. ...+|+.+|++||++|++.+..++.. ...++.+|||||+|+|++|++|+++++||+|||+||+|+||
T Consensus 83 ~~~~~~~~~~~~~~~~a~~a~~~Al~~~~~l~~~~~~--~~~~l~~rIGIh~G~v~~G~iG~~r~~y~v~Gd~VN~AaRl 160 (220)
T 1ab8_A 83 IPSQEHAQEPERQYMHIGTMVEFAYALVGKLDAINKH--SFNDFKLRVGINHGPVIAGVIGAQKPQYDIWGNTVNVASRM 160 (220)
T ss_dssp SCCC--------CCHHHHHHHHHHHHHHHHHHHHHTT--TTCCCCCEEEEEEEEEEEEEECSSSCEEEEESHHHHHHHHH
T ss_pred cccccccccccccHHHHHHHHHHHHHHHHHHHHHhhc--cCCceEEEEEEEeeeEEEEeecCCceeEEEECcHHHHHHHH
Confidence 3 12359999999999999998877643 46789999999999999999999977999999999999999
Q ss_pred HhcCCCCcEEeCHHHHHHhhccCCeeEEEcccccCC
Q psy5058 342 ESTGEALKIHISAEVKEALDVIGGFRTEHRGSNYTK 377 (377)
Q Consensus 342 es~a~~g~I~VS~~t~~~l~~~~~f~~~~~G~i~vK 377 (377)
|+.+++++|+||++|++.+.+. .|.++++|.+.||
T Consensus 161 e~~a~~g~I~vS~~~~~~l~~~-~~~~~~~g~~~lK 195 (220)
T 1ab8_A 161 DSTGVLDKIQVTEETSLILQTL-GYTCTCRGIINVK 195 (220)
T ss_dssp HHTCCTTCEEECHHHHHHHHHH-TCCCCC-------
T ss_pred HhcCCCCeEEECHHHHHHhhcC-ceEEEEeccEEec
Confidence 9999999999999999999873 5999999999887
No 4
>3et6_A Soluble guanylyl cyclase beta; guanylate cyclase, dimethylarsenic, lyase, membrane, transmembrane; 2.55A {Chlamydomonas reinhardtii} PDB: 3et6_B
Probab=100.00 E-value=8.7e-39 Score=288.09 Aligned_cols=171 Identities=51% Similarity=0.764 Sum_probs=158.0
Q ss_pred CCCceeeEEEEEEEcCCchhHhhhCChHHHHHHHHHHHHHHHHHhhhC-CeEEEEEeCCeEEEEeCCCCCCCchhHHHHH
Q psy5058 204 PAEYYEAVTVYFSDIVGFTEIAAVSTPLEVVNFLNSIYKLFDARIEGY-DVYKVETIGDSYMVASGLPMKNGDKHVSEIA 282 (377)
Q Consensus 204 ~~~~~~~vTVLF~DI~gFT~ls~~~~p~elv~lLn~~~~~~~~ii~~~-gG~~ik~iGD~~ma~fG~p~~~~d~~a~~a~ 282 (377)
++++++++||||+||+|||.+++.++|++++.+||+++..+++++.+| |+.++|++||++||+||.|.+.++ |+.+|+
T Consensus 3 ~~~e~~~vtvlf~Di~gft~l~~~~~~~~~~~~l~~~~~~~~~~i~~~~g~~~vk~~GD~~~a~fg~~~~~~~-~~~~a~ 81 (190)
T 3et6_A 3 PAQEHPEATVLFSDIVGFTEIASRSSPLEVXSLLDELYQRFDAAIEEYPQLYKVETIGDAYMVVCNVTVPCDD-HADVLL 81 (190)
T ss_dssp CCEEEEEEEEEEEEETTHHHHTTTSCHHHHHHHHHHHHHHHHHHGGGCTTEEEEECTTSCEEEEESSSSCCST-HHHHHH
T ss_pred CccccceEEEEEeEecChhHhHhhCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEEeCCEEEEEECCCCCchh-HHHHHH
Confidence 567889999999999999999999999999999999999999999999 888889999999999999988776 999999
Q ss_pred HHHHHHHHhhccCCCCCCCCCceeEEEEeeeccEEEEEeCCCCCcceeeCcHHHHHHHHHhcCCCCcEEeCHHHHHHhhc
Q psy5058 283 TMALDLLAGSIMFPIPHRKNERVQIRSGMHTGPVVAGIVGTKMPRYCLFGDTVNTASRMESTGEALKIHISAEVKEALDV 362 (377)
Q Consensus 283 ~aAl~i~~~~~~~~~~~~~~~~l~irIGIhtG~vv~G~iGs~~~~y~v~GdtVNiAsRLes~a~~g~I~VS~~t~~~l~~ 362 (377)
+||++|++.+..++. ....++++|||||+|+|++|++|+.+++|++|||+||+|+|||+.+++++|+||+++++.+..
T Consensus 82 ~~al~~~~~~~~~~~--~~~~~l~~riGi~~G~v~~g~vG~~~~~~~v~G~~Vn~Aarl~~~a~~~~I~vs~~~~~~l~~ 159 (190)
T 3et6_A 82 EFALRMHEEASRVAS--SLGEPVRIRVGMHSGPVVAGVVGRKMPRFXLFGDTVNTASRMESHGEAGQIHISEACYCCLRS 159 (190)
T ss_dssp HHHHHHHHHHHTSCC--C---CCCEEEEEEEEEEEEEEECSSSCEEEEESHHHHHHHHHHHTSCTTSEEEEHHHHHHCSC
T ss_pred HHHHHHHHHHHHHHh--ccCCCceEEEEEEeccEEEEecCCCcceEEecCcchhHHHHHHhcCCCCeEEECHHHHHHhCc
Confidence 999999999887653 345679999999999999999999888999999999999999999999999999999999987
Q ss_pred cCCeeEEEcccccCC
Q psy5058 363 IGGFRTEHRGSNYTK 377 (377)
Q Consensus 363 ~~~f~~~~~G~i~vK 377 (377)
...|.++++|.+.+|
T Consensus 160 ~~~~~~~~~g~~~lk 174 (190)
T 3et6_A 160 KERFEIRERGNITVK 174 (190)
T ss_dssp GGGTCCCCEEEECCS
T ss_pred CCceEEEEcCCEEec
Confidence 557999999999887
No 5
>2w01_A Adenylate cyclase; guanylyl cyclase, class III nucleotidyl cyclase, lyase; 2.31A {Synechocystis SP}
Probab=100.00 E-value=7.2e-38 Score=286.57 Aligned_cols=171 Identities=23% Similarity=0.265 Sum_probs=157.7
Q ss_pred CCCceeeEEEEEEEcCCchhHhhhCChHHHHHHHHHHHHHHHHHhhhCCeEEEEEeCCeEEEEeCCCCCCCchhHHHHHH
Q psy5058 204 PAEYYEAVTVYFSDIVGFTEIAAVSTPLEVVNFLNSIYKLFDARIEGYDVYKVETIGDSYMVASGLPMKNGDKHVSEIAT 283 (377)
Q Consensus 204 ~~~~~~~vTVLF~DI~gFT~ls~~~~p~elv~lLn~~~~~~~~ii~~~gG~~ik~iGD~~ma~fG~p~~~~d~~a~~a~~ 283 (377)
...+.+++||||+||+|||.+++.++|++++.+||.||..+++++.+|||+++|++||++||+||.|.+.++ |+.+|++
T Consensus 8 l~~e~~~vtvlf~Di~gfT~l~~~~~~~~~~~~l~~~~~~~~~~i~~~~G~v~k~~GD~~~a~fg~p~~~~~-~a~~Av~ 86 (208)
T 2w01_A 8 MGGDRRPITILTSDLRGFTSTSEGLNPEEVVKVLNIYFGKMADVITHHGGTIDEFMGDGILVLFGAPTSQQD-DALRAVA 86 (208)
T ss_dssp CCCEEEEEEEEEEECTTHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHTTCEEEEEETTEEEEEESSSSCCTT-HHHHHHH
T ss_pred CCCeEEEEEEEEEEecChHHHHhhCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEEcCEEEEEECCCCCChh-HHHHHHH
Confidence 457789999999999999999999999999999999999999999999999999999999999999988766 9999999
Q ss_pred HHHHHHHhhccCCCC--CCCCCceeEEEEeeeccEEEEEeCCCCC-cceeeCcHHHHHHHHHhcCCCCcEEeCHHHHHHh
Q psy5058 284 MALDLLAGSIMFPIP--HRKNERVQIRSGMHTGPVVAGIVGTKMP-RYCLFGDTVNTASRMESTGEALKIHISAEVKEAL 360 (377)
Q Consensus 284 aAl~i~~~~~~~~~~--~~~~~~l~irIGIhtG~vv~G~iGs~~~-~y~v~GdtVNiAsRLes~a~~g~I~VS~~t~~~l 360 (377)
||++|+..+..++.. .....++++|||||+|+|++|++|+.++ +|+++||+||+|+|||+.+.+++|+||+++++.+
T Consensus 87 ~Al~~~~~l~~~~~~~~~~~~~~l~~riGi~~G~v~~g~vG~~~r~~~~v~G~~Vn~AaRl~~~a~~~~I~vs~~~~~~l 166 (208)
T 2w01_A 87 CGVEMQLALREVNQQVTGLGLQPLEMGIGINTGEVVVGNIGSEKRTKYGVVGAQVNLTYRIESYTTGGQIFISSTTLEAA 166 (208)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCCCCCCEEEEEEEEEEEEEEECSSCEEEEEESHHHHHHHHHHHTCCTTCEEEEHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhcCCCceEEEEEEEeeEEEEEEeCCCCeeEEEEECHHHHHHHHHHccCCCCeEEECHHHHHhh
Confidence 999999988766532 2345679999999999999999998665 8999999999999999999999999999999999
Q ss_pred hccCCeeEEEcccccCC
Q psy5058 361 DVIGGFRTEHRGSNYTK 377 (377)
Q Consensus 361 ~~~~~f~~~~~G~i~vK 377 (377)
.+ .|.++++|.+.+|
T Consensus 167 ~~--~~~~~~~~~~~lk 181 (208)
T 2w01_A 167 GD--RVHVNGNRTVQPK 181 (208)
T ss_dssp CT--TEEEEEEEEECCT
T ss_pred hc--ceEecccceEeec
Confidence 87 6999999999887
No 6
>1yk9_A Adenylate cyclase; beta-alpha-beta sandwich, structural genomics, PSI, protein structure initiative; 2.70A {Mycobacterium tuberculosis}
Probab=100.00 E-value=3.7e-39 Score=294.59 Aligned_cols=170 Identities=42% Similarity=0.703 Sum_probs=158.2
Q ss_pred CCCCceeeEEEEEEEcCCchhHhhhCChHHHHHHHHHHHHHHHHHhhhCCeEEEEEeCCeEEEEeCCCCCCCchhHHHHH
Q psy5058 203 VPAEYYEAVTVYFSDIVGFTEIAAVSTPLEVVNFLNSIYKLFDARIEGYDVYKVETIGDSYMVASGLPMKNGDKHVSEIA 282 (377)
Q Consensus 203 ~~~~~~~~vTVLF~DI~gFT~ls~~~~p~elv~lLn~~~~~~~~ii~~~gG~~ik~iGD~~ma~fG~p~~~~d~~a~~a~ 282 (377)
..+++++++||||+||+|||.+++.++|++++.+||+||..+++++.+|||+++|++||++||+||+|.+.++ |+.+|+
T Consensus 3 ~~~~~~~~vtvlf~DI~gfT~l~~~~~~~~~~~~ln~~~~~~~~~i~~~gG~v~k~~GD~~ma~fg~p~~~~~-~a~~A~ 81 (204)
T 1yk9_A 3 IIADKYDEASVLFADIVGFTERASSTAPADLVRFLDRLYSAFDELVDQHGLEKIEVSGDSYMVVSGVPRPRPD-HTQALA 81 (204)
T ss_dssp ---CCCSCEEEEEEEESCSSCSSCCCCSSSTTTHHHHHHTTTTGGGTTSSCEECCCSSSCEEEESCCSSCCTT-HHHHHH
T ss_pred CCccccCcEEEEEEEccChHHHHhcCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEeCCeEEEEECCCCCChH-HHHHHH
Confidence 3567789999999999999999999999999999999999999999999999999999999999999988776 999999
Q ss_pred HHHHHHHHhhccCCCCCCCCCceeEEEEeeeccEEEEEeCCCCCcceeeCcHHHHHHHHHhcCCCCcEEeCHHHHHHhhc
Q psy5058 283 TMALDLLAGSIMFPIPHRKNERVQIRSGMHTGPVVAGIVGTKMPRYCLFGDTVNTASRMESTGEALKIHISAEVKEALDV 362 (377)
Q Consensus 283 ~aAl~i~~~~~~~~~~~~~~~~l~irIGIhtG~vv~G~iGs~~~~y~v~GdtVNiAsRLes~a~~g~I~VS~~t~~~l~~ 362 (377)
+||++|++.+..++.+ ...++++|||||+|+|++|++|+++++|+++||+||+|+|||+.+++++|+||+++++.+.+
T Consensus 82 ~~Al~~~~~~~~~~~~--~~~~l~~rIGI~tG~v~~g~vG~~r~~~~v~G~~Vn~AaRle~~a~~g~I~vs~~~~~~l~~ 159 (204)
T 1yk9_A 82 DFALDMTNVAAQLKDP--RGNPVPLRVGLATGPVVAGVVGSRRFRYCVWGDAVNVASRMESTDSVGQIQVPDEVYERLKD 159 (204)
T ss_dssp THHHHHHHHTTTCCSS--SCCCCCEEEEEEEECEEECCCCSSSCCCCEEEHHHHHTTHHHHSCSTTCEEBCHHHHHCCTT
T ss_pred HHHHHHHHHHHHHHhc--cCCCceEEEEEEeeEEEEEEecCCCceEEEEChHHHHHHHHHhcCCCCeEEECHHHHHHhhc
Confidence 9999999999887643 35689999999999999999999777999999999999999999999999999999999986
Q ss_pred cCCeeEEEcccccCC
Q psy5058 363 IGGFRTEHRGSNYTK 377 (377)
Q Consensus 363 ~~~f~~~~~G~i~vK 377 (377)
.|.++++|.+.+|
T Consensus 160 --~~~~~~~g~~~lk 172 (204)
T 1yk9_A 160 --DFVLRERGHINVK 172 (204)
T ss_dssp --CEEEEECCCCCCS
T ss_pred --CeeEEEcceEEec
Confidence 7999999999987
No 7
>3r5g_A CYAB; adenylyl cyclase, lyase; 1.50A {Pseudomonas aeruginosa} SCOP: d.58.29.0
Probab=100.00 E-value=4.8e-38 Score=284.80 Aligned_cols=172 Identities=27% Similarity=0.351 Sum_probs=156.2
Q ss_pred CCCceeeEEEEEEEcCCchhHhhhCChHHHHHHHHHHHHHHHHHhhhCCeEEEEEeCCeEEEEeCCCCCCC-chhHHHHH
Q psy5058 204 PAEYYEAVTVYFSDIVGFTEIAAVSTPLEVVNFLNSIYKLFDARIEGYDVYKVETIGDSYMVASGLPMKNG-DKHVSEIA 282 (377)
Q Consensus 204 ~~~~~~~vTVLF~DI~gFT~ls~~~~p~elv~lLn~~~~~~~~ii~~~gG~~ik~iGD~~ma~fG~p~~~~-d~~a~~a~ 282 (377)
...+.+++||||+||+|||.+++.++|++++.+||.++..+++++.+|||+++|++||++||+||.|...+ .+|+.+|+
T Consensus 3 l~~e~~~vtvlf~Di~gft~l~~~~~~~~~~~~l~~~~~~~~~~i~~~~G~v~k~~GD~~~a~fg~p~~~~~~~~a~~a~ 82 (198)
T 3r5g_A 3 LETQRKKLTVFFSDIRGFTELSEELEAEALTDLLNNYLNEMSKIALKYGGTIDKFVGDCVMVFFGDPSTQGAKKDAVAAV 82 (198)
T ss_dssp -CCEEEEEEEEEEEEETHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHTCEEEEEETTEEEEEESSSSCSCHHHHHHHHH
T ss_pred CCceEEEEEEEEEEccccchhhhhCCHHHHHHHHHHHHHHHHHHHHHcCCEEEeeeCCEEEEEECCCcccccHHHHHHHH
Confidence 35678999999999999999999999999999999999999999999999999999999999999998763 34899999
Q ss_pred HHHHHHHHhhccCCCCCC---CCCceeEEEEeeeccEEEEEeCCCCC-cceeeCcHHHHHHHHHhcCCCCcEEeCHHHHH
Q psy5058 283 TMALDLLAGSIMFPIPHR---KNERVQIRSGMHTGPVVAGIVGTKMP-RYCLFGDTVNTASRMESTGEALKIHISAEVKE 358 (377)
Q Consensus 283 ~aAl~i~~~~~~~~~~~~---~~~~l~irIGIhtG~vv~G~iGs~~~-~y~v~GdtVNiAsRLes~a~~g~I~VS~~t~~ 358 (377)
.||++|++.+..++..+. ...++++|||||+|+|++|++|+..+ +|+++||+||+|+||++.+++++|+||+++++
T Consensus 83 ~~al~i~~~~~~~~~~~~~~~~~~~l~~riGi~~G~v~~g~vG~~~~~~~~v~G~~Vn~Aarl~~~a~~~~I~vs~~~~~ 162 (198)
T 3r5g_A 83 SMGIAMRKHMKVLRQQWRAQGITKPLEIRMGINTGYCTVGNFGADTRMDYTIIGREVNLASRLESASEAGEILISHETYS 162 (198)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCCSCCEEEEEEEEEEEEEEEEEETTEEEEEEESHHHHHHHHHHHHCCTTCEEEEHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCceEEEEEEEEEEEEEEEeCCCcceEEEEECcHHHHHHHHHhhCCCCcEEECHHHHH
Confidence 999999998876643221 23579999999999999999998865 89999999999999999999999999999999
Q ss_pred HhhccCCeeEEEcccccCC
Q psy5058 359 ALDVIGGFRTEHRGSNYTK 377 (377)
Q Consensus 359 ~l~~~~~f~~~~~G~i~vK 377 (377)
.+.+ .|.++++|.+.+|
T Consensus 163 ~l~~--~~~~~~~g~~~lk 179 (198)
T 3r5g_A 163 LIKD--VIMCRDKGQIAVK 179 (198)
T ss_dssp HHTT--TSCEEEEEEECCT
T ss_pred Hhhc--CceEEEcccEEee
Confidence 9986 6999999999887
No 8
>1azs_A VC1; complex (lyase/hydrolase), hydrolase, signal transducing protein, cyclase, effector enzyme; HET: GSP FKP; 2.30A {Canis lupus familiaris} SCOP: d.58.29.1 PDB: 1cs4_A* 1u0h_A* 2gvd_A* 2gvz_A* 3c14_A* 3c15_A* 3c16_A* 3e8a_A* 3g82_A* 3maa_A* 1cul_A* 1cjk_A* 1cju_A* 1cjv_A* 1cjt_A* 1tl7_A*
Probab=100.00 E-value=2.6e-38 Score=292.51 Aligned_cols=165 Identities=27% Similarity=0.480 Sum_probs=152.9
Q ss_pred CCCCCceeeEEEEEEEcCCchhHhhhCChHHHHHHHHHHHHHHHHHhhhCCeEEEEEeCCeEEEEeCCCCCCCchhHHHH
Q psy5058 202 QVPAEYYEAVTVYFSDIVGFTEIAAVSTPLEVVNFLNSIYKLFDARIEGYDVYKVETIGDSYMVASGLPMKNGDKHVSEI 281 (377)
Q Consensus 202 ~~~~~~~~~vTVLF~DI~gFT~ls~~~~p~elv~lLn~~~~~~~~ii~~~gG~~ik~iGD~~ma~fG~p~~~~d~~a~~a 281 (377)
++..++++++||||+||+|||.+++.++|++++.+||+||..+++++.+|||+++|++||++||+||+|.+.++ |+.+|
T Consensus 26 ~l~~~~~~~vtvlF~DI~gfT~l~e~~~~~~~~~~Ln~~~~~~~~~i~~~gG~v~k~iGD~~ma~fg~p~~~~~-~a~~A 104 (220)
T 1azs_A 26 KIYIQKHDNVSILFADIEGFTSLASQCTAQELVMTLNELFARFDKLAAENHCLRIKILGDCYYCVSGLPEARAD-HAHCC 104 (220)
T ss_dssp CCEEEEEEEEEEEEEEEETHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHTEEEEEEETTEEEEEESCSSCCST-HHHHH
T ss_pred cccccccccEEEEEEEccChHHHHhhCCHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCeEEEEECCCCCChH-HHHHH
Confidence 34566789999999999999999999999999999999999999999999999999999999999999998776 99999
Q ss_pred HHHHHHHHHhhccCCCCCCCCCceeEEEEeeeccEEEEEeCCCCCcceeeCcHHHHHHHHHhcCCCCcEEeCHHHHHHhh
Q psy5058 282 ATMALDLLAGSIMFPIPHRKNERVQIRSGMHTGPVVAGIVGTKMPRYCLFGDTVNTASRMESTGEALKIHISAEVKEALD 361 (377)
Q Consensus 282 ~~aAl~i~~~~~~~~~~~~~~~~l~irIGIhtG~vv~G~iGs~~~~y~v~GdtVNiAsRLes~a~~g~I~VS~~t~~~l~ 361 (377)
++||++|++.+..++.. .+.++.+|||||+|+|++|++|+.+++||+|||+||+|+|||+.+++|+|+||++|++.+.
T Consensus 105 v~~Al~m~~~l~~~~~~--~~~~l~irIGI~tG~v~~G~vG~~~~~y~v~Gd~VN~AaRLe~~a~~g~IlvS~~t~~~l~ 182 (220)
T 1azs_A 105 VEMGMDMIEAISLVREM--TGVNVNMRVGIHSGRVHCGVLGLRKWQFDVWSNDVTLANHMEAGGKAGRIHITKATLSYLN 182 (220)
T ss_dssp HHHHHHHHHHHHHHHHH--HCSCCEEEEEEEEEEEEEEECSSSSCCCEEESHHHHHHHHHHHTCCTTSEEECSTTTTTTT
T ss_pred HHHHHHHHHHHHHHHhh--cCCCcEEEEEEEEeEEEEEEeCCCCcEEEEEchHHHHHHHHHhcCCCCeEEECHHHHHhhc
Confidence 99999999988776532 3458999999999999999999998899999999999999999999999999999999998
Q ss_pred ccCCeeEEEc
Q psy5058 362 VIGGFRTEHR 371 (377)
Q Consensus 362 ~~~~f~~~~~ 371 (377)
+ .|.+++.
T Consensus 183 ~--~f~~~~~ 190 (220)
T 1azs_A 183 G--DYEVEPG 190 (220)
T ss_dssp T--CSCEEEC
T ss_pred C--ceEEEEC
Confidence 6 6999885
No 9
>1wc3_A Adenylate cyclase; soluble adenylyl cyclase, CAMP signaling, lyase; HET: APC; 1.9A {Spirulina platensis} SCOP: d.58.29.1 PDB: 1wc0_A* 1wc4_A* 1wc5_A* 2bw7_A* 1wc1_A* 1wc6_A*
Probab=100.00 E-value=1.3e-36 Score=280.77 Aligned_cols=173 Identities=23% Similarity=0.269 Sum_probs=155.0
Q ss_pred CCCCCceeeEEEEEEEcCCchhHhhhCChHHHHHHHHHHHHHHHHHhhhCCeEEEEEeCCeEEEEeCCCCCCC-chhHHH
Q psy5058 202 QVPAEYYEAVTVYFSDIVGFTEIAAVSTPLEVVNFLNSIYKLFDARIEGYDVYKVETIGDSYMVASGLPMKNG-DKHVSE 280 (377)
Q Consensus 202 ~~~~~~~~~vTVLF~DI~gFT~ls~~~~p~elv~lLn~~~~~~~~ii~~~gG~~ik~iGD~~ma~fG~p~~~~-d~~a~~ 280 (377)
.....+.+++||||+||+|||.+++.++|++++.+||+||..+++++.+|||+++|++||++||+||.|...+ .+|+.+
T Consensus 19 ~~l~~e~~~vtvlF~DI~gfT~l~~~~~~~~~~~~Ln~~~~~~~~~i~~~gG~v~k~iGD~~ma~fg~p~~~~~~~~a~~ 98 (219)
T 1wc3_A 19 SHMRPEPRLITILFSDIVGFTRMSNALQSQGVAELLNEYLGEMTRAVFENQGTVDKFVGDAIMALYGAPEEMSPSEQVRR 98 (219)
T ss_dssp CCCCCEEEEEEEEEEEEESHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHTTCEEEEEETTEEEEEESSSSCCCHHHHHHH
T ss_pred cccCCceeEEEEEEEEecChHHHHhhCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEEcCeEEEEECCCCCCCChHHHHH
Confidence 3456678999999999999999999999999999999999999999999999999999999999999997643 348999
Q ss_pred HHHHHHHHHHhhccCCCC--------CCCCCceeEEEEeeeccEEEEEeCCCCC-cceeeCcHHHHHHHHHhcCCCCcEE
Q psy5058 281 IATMALDLLAGSIMFPIP--------HRKNERVQIRSGMHTGPVVAGIVGTKMP-RYCLFGDTVNTASRMESTGEALKIH 351 (377)
Q Consensus 281 a~~aAl~i~~~~~~~~~~--------~~~~~~l~irIGIhtG~vv~G~iGs~~~-~y~v~GdtVNiAsRLes~a~~g~I~ 351 (377)
|++||++|++.+..++.. .....++++|||||+|+|++|++|+..+ +|+++||+||+|+|||+.+++++|+
T Consensus 99 Av~~Al~~~~~l~~~~~~~~~~~~~~~~~~~~l~~rIGIh~G~v~~G~vG~~~r~~y~v~Gd~VN~AaRLe~~a~~g~Il 178 (219)
T 1wc3_A 99 AIATARQMLVALEKLNQGWQERGLVGRNEVPPVRFRCGIHQGMAVVGLFGSQERSDFTAIGPSVNIAARLQEATAPNSIM 178 (219)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTSSSSTTCCCCEEEEEEEEEEEEEEEEEETTEEEEEEESHHHHHHHHHHHHSCTTEEE
T ss_pred HHHHHHHHHHHHHHHHHHHhhcccccccCCCccEEEEEEEeceEEEEEcCCCCeeEEEEECHHHHHHHHHHhcCCCCeEE
Confidence 999999999988765421 1235689999999999999999998655 8999999999999999999999999
Q ss_pred eCHHHHHHhhccCCeeEEEcccccCC
Q psy5058 352 ISAEVKEALDVIGGFRTEHRGSNYTK 377 (377)
Q Consensus 352 VS~~t~~~l~~~~~f~~~~~G~i~vK 377 (377)
||+++++.+.+ +.++++|.+.+|
T Consensus 179 vS~~~~~~l~~---~~~~~~g~~~lK 201 (219)
T 1wc3_A 179 VSAMVAQYVPD---EEIIKREFLELK 201 (219)
T ss_dssp EEHHHHTTSCG---GGEEEEEEECCT
T ss_pred ECHHHHHhhcc---cceeEeeeEEec
Confidence 99999999986 368899999887
No 10
>1y10_A Hypothetical protein RV1264/MT1302; adenylyl cyclase fold, lyase; HET: 1PE; 2.30A {Mycobacterium tuberculosis} PDB: 1y11_A*
Probab=100.00 E-value=2.9e-35 Score=294.15 Aligned_cols=182 Identities=26% Similarity=0.334 Sum_probs=161.0
Q ss_pred HHHHHHHHHHHHhccCC-------HHHHHHHHccCC------------CCCCceeeEEEEEEEcCCchhHhhhCChHHHH
Q psy5058 174 LKREKHKSDTLLVQMLP-------PSVAMQLKQTQQ------------VPAEYYEAVTVYFSDIVGFTEIAAVSTPLEVV 234 (377)
Q Consensus 174 l~~ek~~~~~lL~~~lP-------~~v~~~L~~~~~------------~~~~~~~~vTVLF~DI~gFT~ls~~~~p~elv 234 (377)
..+++++++++|.+++| +.++++|+.+.. ....+++++||||+||+|||.+++.++|++++
T Consensus 160 ~~ee~~kse~LL~~iLP~L~~~l~~~va~~L~~~~~~~~v~~~~r~~~~~~~~~~~vTVlFaDIvgFT~ls~~~~p~evv 239 (407)
T 1y10_A 160 ELDIAKGSQALVSQIVPLLGPMIQDMLFMQLRHMMETEAVNAGERAAGKPLPGARQVTVAFADLVGFTQLGEVVSAEELG 239 (407)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCTTCEEEEEEEEEECSBCTTSCBCCHHHHH
T ss_pred cHhHHHHHHHHHHHhcccccccchHHHHHHHHhcccchhhhhhhhcccccccceeeEEEEEEEccCchHHHhhCCHHHHH
Confidence 45678899999999999 889888876532 12246799999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhCCeEEEEEeCCeEEEEeCCCCCCCchhHHHHHHHHHHHHHhhccCCCCCCCCCceeEEEEeeec
Q psy5058 235 NFLNSIYKLFDARIEGYDVYKVETIGDSYMVASGLPMKNGDKHVSEIATMALDLLAGSIMFPIPHRKNERVQIRSGMHTG 314 (377)
Q Consensus 235 ~lLn~~~~~~~~ii~~~gG~~ik~iGD~~ma~fG~p~~~~d~~a~~a~~aAl~i~~~~~~~~~~~~~~~~l~irIGIhtG 314 (377)
.+||.|+..++.++. |+|+++|++||+|||+||.|. +|++||++|+..+...+ .++.+|||||+|
T Consensus 240 ~lLn~~~~~~~~i~~-~~g~~iKtiGDa~mavfg~p~--------~a~~~Al~m~~~l~~~~------~~l~iRIGIhtG 304 (407)
T 1y10_A 240 HLAGRLAGLARDLTA-PPVWFIKTIGDAVMLVCPDPA--------PLLDTVLKLVEVVDTDN------NFPRLRAGVASG 304 (407)
T ss_dssp HHHHHHHHHHHHHCC-TTCEEEEEETTEEEEEESSHH--------HHHHHHHHHHHHHHTCT------TSCCEEEEEEEE
T ss_pred HHHHHHHHHHHHHHH-cCcEEEEEecceEEEEECCHH--------HHHHHHHHHHHHHHHhC------CCceEEEEEEEE
Confidence 999999998887766 899999999999999999762 58899999999887632 457999999999
Q ss_pred cEEEEEeCCCCCcceeeCcHHHHHHHHHhcCCCCcEEeCHHHHHHhhcc---CCeeEEEcccccCC
Q psy5058 315 PVVAGIVGTKMPRYCLFGDTVNTASRMESTGEALKIHISAEVKEALDVI---GGFRTEHRGSNYTK 377 (377)
Q Consensus 315 ~vv~G~iGs~~~~y~v~GdtVNiAsRLes~a~~g~I~VS~~t~~~l~~~---~~f~~~~~G~i~vK 377 (377)
+|++|+ ||+|||+||+|+|||+.++||+|+||++|++.+... ..|.++++|.+.+|
T Consensus 305 ~Vv~Gv-------ydv~GdtVN~AsRLes~a~~g~I~vS~~t~~~l~~~~~~~~f~~~~~G~v~lK 363 (407)
T 1y10_A 305 MAVSRA-------GDWFGSPVNVASRVTGVARPGAVLVADSVREALGDAPEADGFQWSFAGPRRLR 363 (407)
T ss_dssp EEEEET-------TEEEEHHHHHHHHHHHHCCTTCEEEEHHHHHSCCCC---CCCEEEEEEEECCT
T ss_pred EEEEec-------CccCCCHHHHHHHHHhcCCCCeEEECHHHHHHHhcccccCceEEEEeceEEeC
Confidence 999983 899999999999999999999999999999999873 47999999999987
No 11
>1ybt_A Hydrolase, alpha/beta hydrolase fold family; cyclase homology domain, CHD, RV1900C; 2.31A {Mycobacterium tuberculosis} PDB: 1ybu_A*
Probab=100.00 E-value=4.3e-35 Score=263.57 Aligned_cols=156 Identities=21% Similarity=0.263 Sum_probs=142.8
Q ss_pred CCCCCceeeEEEEEEEcCCchhHhhhCChHHHHHHHHHHHHHHHHHhhhCCeEEEEEeCCeEEEEeCCCCCCCchhHHHH
Q psy5058 202 QVPAEYYEAVTVYFSDIVGFTEIAAVSTPLEVVNFLNSIYKLFDARIEGYDVYKVETIGDSYMVASGLPMKNGDKHVSEI 281 (377)
Q Consensus 202 ~~~~~~~~~vTVLF~DI~gFT~ls~~~~p~elv~lLn~~~~~~~~ii~~~gG~~ik~iGD~~ma~fG~p~~~~d~~a~~a 281 (377)
..+..+.+++||||+||+|||.+++.++|++++.+||+|+..+++++.+|||+++|++||++|++||.| .+|
T Consensus 9 ~~~~~~~~~~tvlf~Di~gft~l~~~~~~~~~~~~l~~~~~~~~~~i~~~gG~v~k~~GD~~ma~f~~p--------~~A 80 (184)
T 1ybt_A 9 HHGSAERMLATIMFTDIVGSTQHAAALGDDRWRDLLDNHDTIVCHEIQRFGGREVNTAGDGFVATFTSP--------SAA 80 (184)
T ss_dssp ----CEEEEEEEEEEEETTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEECCCSSSSEEEEESCH--------HHH
T ss_pred CCCCCceEEEEEEEEECcCcHHHHHhCCHHHHHHHHHHHHHHHHHHHHHcCCEEEeEeCCEEEEEeCCH--------HHH
Confidence 345678899999999999999999999999999999999999999999999999999999999999865 478
Q ss_pred HHHHHHHHHhhccCCCCCCCCCceeEEEEeeeccEEEEEeCCCCCcceeeCcHHHHHHHHHhcCCCCcEEeCHHHHHHhh
Q psy5058 282 ATMALDLLAGSIMFPIPHRKNERVQIRSGMHTGPVVAGIVGTKMPRYCLFGDTVNTASRMESTGEALKIHISAEVKEALD 361 (377)
Q Consensus 282 ~~aAl~i~~~~~~~~~~~~~~~~l~irIGIhtG~vv~G~iGs~~~~y~v~GdtVNiAsRLes~a~~g~I~VS~~t~~~l~ 361 (377)
++||++|++.+..++ +++|||||+|+|++|.+|.. |+++||+||+|+|||+.+++++|++|+++++.+.
T Consensus 81 ~~~Al~~~~~l~~~~--------l~~riGi~~G~v~~g~ig~~---~~~~G~~Vn~AaRl~~~a~~g~IlvS~~~~~~l~ 149 (184)
T 1ybt_A 81 IACADDIVDAVAALG--------IEVRIGIHAGEVEVRDASHG---TDVAGVAVHIGARVCALAGPSEVLVSSTVRDIVA 149 (184)
T ss_dssp HHHHHHHHHHHHTTT--------CCEEEEEEEEEEEEEECSSC---EEEESHHHHHHHHHHHHSCTTCEEEEHHHHHHTT
T ss_pred HHHHHHHHHHHHhcC--------CcEEEEEEEeEEEEEecCCC---ceEECcHHHHHHHHHhcCCCCEEEECHHHHHhhc
Confidence 999999999888653 89999999999999999874 9999999999999999999999999999999996
Q ss_pred ccCCeeEEEcccccCC
Q psy5058 362 VIGGFRTEHRGSNYTK 377 (377)
Q Consensus 362 ~~~~f~~~~~G~i~vK 377 (377)
. ..|.++++|.+.+|
T Consensus 150 ~-~~~~~~~~g~~~lk 164 (184)
T 1ybt_A 150 G-SRHRFAERGEQELK 164 (184)
T ss_dssp T-SSCCEEEEEEECCT
T ss_pred c-cCceEEEcCCEEec
Confidence 4 37999999999887
No 12
>1fx2_A Receptor-type adenylate cyclase gresag 4.1; CAMP, trypanosomes, adenylyl cyclases, monomer-dimer, catalysis, lyase; 1.46A {Trypanosoma brucei} SCOP: d.58.29.1 PDB: 1fx4_A
Probab=100.00 E-value=4.7e-35 Score=272.30 Aligned_cols=167 Identities=23% Similarity=0.297 Sum_probs=147.9
Q ss_pred CCCCCCceeeEEEEEEEcCCchhHhhhCChHHHHHHHHHHHHHHHHHhhhCCeEEEEEeCCeEEEEeCCCCCCCchhHHH
Q psy5058 201 QQVPAEYYEAVTVYFSDIVGFTEIAAVSTPLEVVNFLNSIYKLFDARIEGYDVYKVETIGDSYMVASGLPMKNGDKHVSE 280 (377)
Q Consensus 201 ~~~~~~~~~~vTVLF~DI~gFT~ls~~~~p~elv~lLn~~~~~~~~ii~~~gG~~ik~iGD~~ma~fG~p~~~~d~~a~~ 280 (377)
+..+++.++++||||+||+|||.+++.+ |++++.+||.|+..+++++.+|||+++|++||+|||+||.| .+
T Consensus 3 ~~~~~~~~~~vtvlF~DI~gfT~l~~~~-~~~~~~~l~~~~~~~~~~i~~~~G~v~k~~GD~~ma~fg~p--------~~ 73 (235)
T 1fx2_A 3 NRAPKEPTDPVTLIFTDIESSTALWAAH-PDLMPDAVAAHHRMVRSLIGRYKCYEVKTVGDSFMIASKSP--------FA 73 (235)
T ss_dssp GGSCCCTTSCEEEEEEEETTHHHHHHHC-TTTHHHHHHHHHHHHHHHHHHTTCEEEEEETTEEEEEESCH--------HH
T ss_pred CcCCCCCCCcEEEEEEeccChHHHHHHC-HHHHHHHHHHHHHHHHHHHHHcCCEEEEEcCCeEEEEeCCH--------HH
Confidence 3456778899999999999999999986 99999999999999999999999999999999999999975 35
Q ss_pred HHHHHHHHHHhhccCCCCCC----------------------------------CCCceeEEEEeeeccEEEEEeCCCCC
Q psy5058 281 IATMALDLLAGSIMFPIPHR----------------------------------KNERVQIRSGMHTGPVVAGIVGTKMP 326 (377)
Q Consensus 281 a~~aAl~i~~~~~~~~~~~~----------------------------------~~~~l~irIGIhtG~vv~G~iGs~~~ 326 (377)
|+++|++|+..+...+++.. ...++++|||||+|+|++|++|. ++
T Consensus 74 A~~~Al~i~~~l~~~~w~~~~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~l~~riGIh~G~v~~G~~G~-~~ 152 (235)
T 1fx2_A 74 AVQLAQELQLCFLHHDWGTNALDDSYREFEEQRAEGECEYTPPTAHMDPEVYSRLWNGLRVRVGIHTGLCDIRHDEV-TK 152 (235)
T ss_dssp HHHHHHHHHHHHHHSCCSCSHHHHHHHHHHHHHHHHCSSCCCSSTTSCHHHHHHHCCSCCEEEEEEEECCEEEECTT-SS
T ss_pred HHHHHHHHHHHHHhCCCchhHhhhhhhhhhhhccccccccCccccccccccccccccCcEEEEEEEeeEEEEEeccc-cc
Confidence 88899999988766554321 12469999999999999999998 66
Q ss_pred cceeeCcHHHHHHHHHhcCCCCcEEeCHHHHHHhhcc--CCeeEEEcccccCC
Q psy5058 327 RYCLFGDTVNTASRMESTGEALKIHISAEVKEALDVI--GGFRTEHRGSNYTK 377 (377)
Q Consensus 327 ~y~v~GdtVNiAsRLes~a~~g~I~VS~~t~~~l~~~--~~f~~~~~G~i~vK 377 (377)
+|+++||+||+|+|||+.+++++|+||++|++.+.+. +.|.++++|.+.+|
T Consensus 153 ~~~v~Gd~VN~AaRle~~a~~g~IlvS~~~~~~l~~~~~~~~~~~~~g~~~lk 205 (235)
T 1fx2_A 153 GYDYYGRTPNMAARTESVANGGQVLMTHAAYMSLSAEDRKQIDVTALGDVALR 205 (235)
T ss_dssp SEEEESHHHHHHHHHHHTCCTTCEEEEHHHHHTSCHHHHHTCCEEEEEEECCT
T ss_pred ceEEECHHHHHHHHHHhhcCCCEEEECHHHHHHHhhhcccCceeEecccEEec
Confidence 8999999999999999999999999999999999641 36999999999887
No 13
>3mr7_A Adenylate/guanylate cyclase/hydrolase, alpha/beta family; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.60A {Ruegeria pomeroyi}
Probab=100.00 E-value=1.5e-33 Score=253.87 Aligned_cols=157 Identities=20% Similarity=0.206 Sum_probs=142.8
Q ss_pred CCceeeEEEEEEEcCCchhHhhhCChHHHHHHHHHHHHH-HHHHhhhCCeEEEEEeCCeEEEEeCCCCCCCchhHHHHHH
Q psy5058 205 AEYYEAVTVYFSDIVGFTEIAAVSTPLEVVNFLNSIYKL-FDARIEGYDVYKVETIGDSYMVASGLPMKNGDKHVSEIAT 283 (377)
Q Consensus 205 ~~~~~~vTVLF~DI~gFT~ls~~~~p~elv~lLn~~~~~-~~~ii~~~gG~~ik~iGD~~ma~fG~p~~~~d~~a~~a~~ 283 (377)
+.+++++||||+||+|||.+++.++|+.+ ..|+.+|.. +++++.+|||+++|++||++||+|| ++.+|++
T Consensus 2 ~~e~r~vtvlf~Di~gft~l~~~~~~~~~-~~l~~~~~~~~~~~i~~~~G~v~k~~GD~~~a~f~--------~~~~A~~ 72 (189)
T 3mr7_A 2 NAERRLCAILAADMAGYSRLMERNETDVL-NRQKLYRRELIDPAIAQAGGQIVKTTGDGMLARFD--------TAQAALR 72 (189)
T ss_dssp CCEEEEEEEEEEEECCCCGGGCCCCHHHH-HHHHHHHHHTHHHHHHHTTCEEEEEETTEEEEEES--------SHHHHHH
T ss_pred CCcEEEEEEEEEEchhhHHHHhhCCHHHH-HHHHHHHHHHHHHHHHHcCCEEEEEeCCEEEEEeC--------CHHHHHH
Confidence 35789999999999999999999888776 677887777 9999999999999999999999998 3578999
Q ss_pred HHHHHHHhhccCCCCCCCCCceeEEEEeeeccEEEEEeCCCCCcceeeCcHHHHHHHHHhcCCCCcEEeCHHHHHHhhcc
Q psy5058 284 MALDLLAGSIMFPIPHRKNERVQIRSGMHTGPVVAGIVGTKMPRYCLFGDTVNTASRMESTGEALKIHISAEVKEALDVI 363 (377)
Q Consensus 284 aAl~i~~~~~~~~~~~~~~~~l~irIGIhtG~vv~G~iGs~~~~y~v~GdtVNiAsRLes~a~~g~I~VS~~t~~~l~~~ 363 (377)
||++|+..+..++..+....++++|||||+|+|++| .|+++||+||+|+||++.+++|+|+||+++++.+.+.
T Consensus 73 ~Al~i~~~l~~~~~~~~~~~~l~~riGi~~G~v~~g-------~~~~~G~~Vn~AaRl~~~a~~~~I~vs~~~~~~l~~~ 145 (189)
T 3mr7_A 73 CALEIQQAMQQREEDTPRKERIQYRIGINIGDIVLE-------DGDIFGDAVNVAARLEAISEPGAICVSDIVHQITQDR 145 (189)
T ss_dssp HHHHHHHHHHHHTTTSCGGGCCCEEEEEEEEEEEEC-------SSCEESHHHHHHHHHHHHSCTTCEEEEHHHHHHHTTT
T ss_pred HHHHHHHHHHHHhhhcccCCceeEEEEEEEEEEEEE-------CCeEEChHHHHHHHHHhhCCCCeEEECHHHHHhhccc
Confidence 999999999988766555678999999999999998 7899999999999999999999999999999999975
Q ss_pred CCeeEEEcccccCC
Q psy5058 364 GGFRTEHRGSNYTK 377 (377)
Q Consensus 364 ~~f~~~~~G~i~vK 377 (377)
..|.++++|.+.+|
T Consensus 146 ~~~~~~~~g~~~lk 159 (189)
T 3mr7_A 146 VSEPFTDLGLQKVK 159 (189)
T ss_dssp CCSCCEEEEEEEET
T ss_pred cCceEEECCCEEeC
Confidence 56999999998887
No 14
>3hls_A Guanylate cyclase soluble subunit beta-1; coiled-coil domain, signaling helix, S-helix, CGMP biosynthesis, cytoplasm, GTP-binding, heme, iron; 2.15A {Rattus norvegicus}
Probab=97.47 E-value=0.00076 Score=49.71 Aligned_cols=44 Identities=39% Similarity=0.598 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHcc
Q psy5058 157 VTTIQMYAAHLAQKAHELKREKHKSDTLLVQMLPPSVAMQLKQT 200 (377)
Q Consensus 157 ~~~~~~~~~~l~~~~~~l~~ek~~~~~lL~~~lP~~v~~~L~~~ 200 (377)
...+..+..++.+...++..+|++++++|.+++|+.|+++|+.|
T Consensus 23 ~~~lE~~~~~Lee~t~~L~~EK~ktd~LL~~mLP~~VA~~Lk~G 66 (66)
T 3hls_A 23 TQELEMLTDRLQLTLRALEDEKKKTDTLLYSVLPPSVANELRHK 66 (66)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHhCc
Confidence 44557788889999999999999999999999999999999865
No 15
>3i5c_A Fusion of general control protein GCN4 and WSPR R regulator protein; C-DI-GMP, ggdef, leucine zipper, signaling protein; HET: C2E; 1.94A {Pseudomonas aeruginosa PAO1} PDB: 3i5b_A*
Probab=96.05 E-value=0.28 Score=42.40 Aligned_cols=59 Identities=7% Similarity=0.019 Sum_probs=49.4
Q ss_pred eEEEEEEEcCCchhHhhhCChHHHHHHHHHHHHHHHHHhhhCCeEEEEEeCCeEEEEeC
Q psy5058 210 AVTVYFSDIVGFTEIAAVSTPLEVVNFLNSIYKLFDARIEGYDVYKVETIGDSYMVASG 268 (377)
Q Consensus 210 ~vTVLF~DI~gFT~ls~~~~p~elv~lLn~~~~~~~~ii~~~gG~~ik~iGD~~ma~fG 268 (377)
..++++.||.+|..+.+..+.+.-=.+|..+-..+...+...+..+-.+-||.++++..
T Consensus 61 ~~~l~~idid~f~~in~~~G~~~gd~~L~~ia~~L~~~~~~~~~~~~R~~~d~F~il~~ 119 (206)
T 3i5c_A 61 QLSLLMIDVDYFKSYNDTFGHVAGDEALRQVAGAIREGCSRSSDLAARYGGEEFAMVLP 119 (206)
T ss_dssp CEEEEEEEETTHHHHHHHHCHHHHHHHHHHHHHHHHTTCCSTTCEEEEEETTEEEEEEE
T ss_pred cEEEEEEECcchhHHHhccChhHHHHHHHHHHHHHHHhcCCCCcEEEEecCCeEEEEEC
Confidence 48999999999999999999888877777777777766655677888999999988873
No 16
>2qv6_A MJ0145, GTP cyclohydrolase III, MJGC; enzyme, FAPY; HET: GTP; 2.00A {Methanocaldococcus jannaschii}
Probab=94.18 E-value=0.25 Score=46.02 Aligned_cols=62 Identities=16% Similarity=0.179 Sum_probs=55.3
Q ss_pred ceeeEEEEEEEcCCchh-HhhhCChHHHHHHHHHHHHHHHHHhhhCCeEEEEEeCCeEEEEeC
Q psy5058 207 YYEAVTVYFSDIVGFTE-IAAVSTPLEVVNFLNSIYKLFDARIEGYDVYKVETIGDSYMVASG 268 (377)
Q Consensus 207 ~~~~vTVLF~DI~gFT~-ls~~~~p~elv~lLn~~~~~~~~ii~~~gG~~ik~iGD~~ma~fG 268 (377)
...+++|...||.++|. .....+|-+......+++..+.+.++++||.....-||-||++..
T Consensus 128 ~dsqIaVahiDI~d~t~~~t~~~s~yd~~~~~l~l~~~Ll~y~~~igG~lf~iGgdny~iftt 190 (268)
T 2qv6_A 128 VDGYVQIAHIDINNITGTLTDIVSAYDTYLNVNKVKLALMEELLKYNALLFFIGGDNFMAPSN 190 (268)
T ss_dssp SSCCEEEEEEEETTHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTTCCCEEEETTEEEEECT
T ss_pred CcCceEEEEEEecCccccccccCChHHHHHHHHHHHHHHHHHHHHhCCEEEEECCCEEEEEeC
Confidence 35679999999999999 555668999999999999999999999999999888999999884
No 17
>3pjx_A Cyclic dimeric GMP binding protein; ggdef-EAL tandem domain, C-DI-GMP receptor, lyase; 2.00A {Pseudomonas fluorescens} PDB: 3pjw_A 3pju_A* 3pjt_A* 3pfm_A
Probab=92.49 E-value=1.8 Score=42.32 Aligned_cols=99 Identities=8% Similarity=0.024 Sum_probs=66.3
Q ss_pred eeeEEEEEEEcCCchhHhhhCChHHHHHHHHHHHHHHHHHhhhC---CeEEEEEeCCeEEEEeCCCCCCCchhHHHHHHH
Q psy5058 208 YEAVTVYFSDIVGFTEIAAVSTPLEVVNFLNSIYKLFDARIEGY---DVYKVETIGDSYMVASGLPMKNGDKHVSEIATM 284 (377)
Q Consensus 208 ~~~vTVLF~DI~gFT~ls~~~~p~elv~lLn~~~~~~~~ii~~~---gG~~ik~iGD~~ma~fG~p~~~~d~~a~~a~~a 284 (377)
....++++.||.+|..+.+..+.+.-=.+|..+-..+...+..+ +..+-.+-||.++++.... ....+...
T Consensus 46 ~~~~~l~~idid~fk~iNd~~G~~~gD~lL~~va~~L~~~~~~~~~~~~~v~R~ggdeF~ill~~~------~~~~~~~~ 119 (430)
T 3pjx_A 46 ASSGYLLLLRVKDLAGLNQRLGGQRTDELLKAVGEQLSRECAKYPETQNLVTRIRGGEFAVLAPGM------TREEALQL 119 (430)
T ss_dssp CSCEEEEEEEETTHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTSGGGTTCEEEEETTEEEEEEETC------CHHHHHHH
T ss_pred cCceEEEEEEchhhhHHHHhcChHHHHHHHHHHHHHHHHHHHhcCCcCceEEEecCceEEEEeCCC------CHHHHHHH
Confidence 34578999999999999999998888888888888888888765 6778899999998887422 12233334
Q ss_pred HHHHHHhhccCCCCCCCCCceeEEEEee
Q psy5058 285 ALDLLAGSIMFPIPHRKNERVQIRSGMH 312 (377)
Q Consensus 285 Al~i~~~~~~~~~~~~~~~~l~irIGIh 312 (377)
+-.+...+............+.+.||+.
T Consensus 120 ~~~l~~~l~~~~~~~~~~~~~~~siGi~ 147 (430)
T 3pjx_A 120 AQSLDSALSSLYATGATDVAAVASIGLA 147 (430)
T ss_dssp HHHHHHHHHHHHHTTSCSCTTCEEEEEE
T ss_pred HHHHHHHHhhhhhcCCeeeeEEEEEEEE
Confidence 4444444332111112234456667665
No 18
>3hva_A Protein FIMX; ggdef diguanylate cyclase, biofilm, C-DI-GMP, transferase; 2.04A {Pseudomonas aeruginosa PAO1}
Probab=91.82 E-value=0.63 Score=39.04 Aligned_cols=78 Identities=10% Similarity=0.035 Sum_probs=57.9
Q ss_pred eEEEEEEEcCCchhHhhhCChHHHHHHHHHHHHHHHHHhhhCCeEEEEEeCCeEEEEeCCCCCCCchhHHHHHHHHHHHH
Q psy5058 210 AVTVYFSDIVGFTEIAAVSTPLEVVNFLNSIYKLFDARIEGYDVYKVETIGDSYMVASGLPMKNGDKHVSEIATMALDLL 289 (377)
Q Consensus 210 ~vTVLF~DI~gFT~ls~~~~p~elv~lLn~~~~~~~~ii~~~gG~~ik~iGD~~ma~fG~p~~~~d~~a~~a~~aAl~i~ 289 (377)
..++++.||.+|..+.+..+.+.--.+|..+-..+...+.. +..+-.+-||.++++..- . ....+...+-.+.
T Consensus 44 ~~~l~~i~id~f~~in~~~G~~~gd~~L~~~a~~L~~~~~~-~~~~~R~~~d~F~ill~~--~----~~~~~~~~~~~i~ 116 (177)
T 3hva_A 44 PSTLAYIHLNGYPSLQADHGLSGIDLLLGQLAGLMREQFGE-EADLARFGDSIFAALFKG--K----TPEQAQAALQRLL 116 (177)
T ss_dssp CEEEEEEEETTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGG-GCEEEECSSSEEEEEEET--C----CHHHHHHHHHHHH
T ss_pred CeEEEEEeCCCHHHHHHHhCchhHHHHHHHHHHHHHHhCCC-CceEEEecCCeEEEEeCC--C----CHHHHHHHHHHHH
Confidence 48999999999999999888887777787777777777765 567888899999888732 1 2344445555666
Q ss_pred Hhhcc
Q psy5058 290 AGSIM 294 (377)
Q Consensus 290 ~~~~~ 294 (377)
..+..
T Consensus 117 ~~~~~ 121 (177)
T 3hva_A 117 KKVEN 121 (177)
T ss_dssp HHHHT
T ss_pred HHHHh
Confidence 55543
No 19
>3mtk_A Diguanylate cyclase/phosphodiesterase; structural genomics, PSI-2, protein structure initiative; 2.24A {Caldicellulosiruptor saccharolyticus}
Probab=90.81 E-value=1.2 Score=37.55 Aligned_cols=59 Identities=8% Similarity=-0.014 Sum_probs=49.6
Q ss_pred eeEEEEEEEcCCchhHhhhCChHHHHHHHHHHHHHHHHHhhhCCeEEEEEeCCeEEEEeC
Q psy5058 209 EAVTVYFSDIVGFTEIAAVSTPLEVVNFLNSIYKLFDARIEGYDVYKVETIGDSYMVASG 268 (377)
Q Consensus 209 ~~vTVLF~DI~gFT~ls~~~~p~elv~lLn~~~~~~~~ii~~~gG~~ik~iGD~~ma~fG 268 (377)
...++++.||.+|..+.+..+.+.-=.+|..+-..+...+.. +..+-.+-||.++++..
T Consensus 35 ~~~~l~~idid~f~~in~~~G~~~gd~lL~~ia~~L~~~~~~-~~~~~R~~~d~F~il~~ 93 (178)
T 3mtk_A 35 IDTYLIFLEVRDLEKLNVTYGYDLVDELIIHISKRIKDIAGE-GNKAFKIGFDRFAIICK 93 (178)
T ss_dssp TTEEEEEEEETTHHHHHHHHCHHHHHHHHHHHHHHHHHHHCS-SSEEEEEETTEEEEEEE
T ss_pred CceEEEEEEhhHhhHHHHHhChHHHHHHHHHHHHHHHHhcCC-CCEEEEecCCEEEEEec
Confidence 357899999999999999999888888888888888777754 66788999999988873
No 20
>3ign_A Diguanylate cyclase; ggdef domain, A1U3W3_marav, NESG, MQR89A, structural genomics, PSI-2, protein structure initiative; HET: C2E; 1.83A {Marinobacter aquaeolei VT8}
Probab=90.64 E-value=1.4 Score=36.89 Aligned_cols=96 Identities=8% Similarity=0.042 Sum_probs=63.2
Q ss_pred eEEEEEEEcCCchhHhhhCChHHHHHHHHHHHHHHHHHhhhCCeEEEEEeCCeEEEEeCCCCCCCchhHHHHHHHHHHHH
Q psy5058 210 AVTVYFSDIVGFTEIAAVSTPLEVVNFLNSIYKLFDARIEGYDVYKVETIGDSYMVASGLPMKNGDKHVSEIATMALDLL 289 (377)
Q Consensus 210 ~vTVLF~DI~gFT~ls~~~~p~elv~lLn~~~~~~~~ii~~~gG~~ik~iGD~~ma~fG~p~~~~d~~a~~a~~aAl~i~ 289 (377)
..++++.||.+|..+.+..+.+.--.+|..+-..+.+.+.. +..+-.+-||.++++... . ....+...+-.+.
T Consensus 39 ~~~l~~i~id~f~~in~~~G~~~gd~~L~~ia~~L~~~~~~-~~~~~R~~~d~F~ill~~--~----~~~~~~~~~~~i~ 111 (177)
T 3ign_A 39 ATSLVMFDIDHFKPVNDTYGHLAGDEVIRHTADVTRNNIRQ-SDSAGRYGGEEFGIILPE--T----DAESARVICERIR 111 (177)
T ss_dssp CEEEEEEEETTHHHHHHHHCHHHHHHHHHHHHHHHHTTSCT-TSEEEECSSSEEEEEEET--C----CHHHHHHHHHHHH
T ss_pred ceEEEEEEchhhHHHHHhhChHHHHHHHHHHHHHHHHhCCC-CCEEEEecCCeEEEEeCC--C----CHHHHHHHHHHHH
Confidence 47999999999999999999887777777777777666644 457888899999888732 1 2334445555565
Q ss_pred HhhccCCCCCC-CCCceeEEEEee
Q psy5058 290 AGSIMFPIPHR-KNERVQIRSGMH 312 (377)
Q Consensus 290 ~~~~~~~~~~~-~~~~l~irIGIh 312 (377)
..+........ ....+.+.||+.
T Consensus 112 ~~~~~~~~~~~~~~~~~~~siGi~ 135 (177)
T 3ign_A 112 EAIEKSTVSTSAGDIQYTVSMGIA 135 (177)
T ss_dssp HHHHTCCEECSSCEECCCEEEEEE
T ss_pred HHHHhcCcccCCCceeEEEEEEEE
Confidence 55544221111 122455566654
No 21
>3tvk_A DGC, diguanylate cyclase YDEH; putative zinc sensor, C-DI-GMP, transfe; HET: C2E; 1.80A {Escherichia coli}
Probab=90.20 E-value=0.97 Score=39.20 Aligned_cols=96 Identities=10% Similarity=0.099 Sum_probs=60.7
Q ss_pred eEEEEEEEcCCchhHhhhCChHHHHHHHHHHHHHHHHHhhhCCeEEEEEeCCeEEEEeCCCCCCCchhHHHHHHHHHHHH
Q psy5058 210 AVTVYFSDIVGFTEIAAVSTPLEVVNFLNSIYKLFDARIEGYDVYKVETIGDSYMVASGLPMKNGDKHVSEIATMALDLL 289 (377)
Q Consensus 210 ~vTVLF~DI~gFT~ls~~~~p~elv~lLn~~~~~~~~ii~~~gG~~ik~iGD~~ma~fG~p~~~~d~~a~~a~~aAl~i~ 289 (377)
.+++++.||-+|..+-+..+...==.+|..+-..+.+.+.. ++.+..+-||.+++++... ....+...+-.+.
T Consensus 33 ~~~l~~iDiD~FK~INd~~Gh~~GD~vL~~va~~L~~~~~~-~~~v~R~gGDEF~ill~~~------~~~~~~~~~~~i~ 105 (179)
T 3tvk_A 33 NLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRD-YETVYRYGGEEFIIIVKAA------NDEEACRAGVRIC 105 (179)
T ss_dssp EEEEEEEEETTHHHHHHHHCHHHHHHHHHHHHHHHHHTSCT-TSCEEECSSSEEEEEEEES------SHHHHHHHHHHHH
T ss_pred CEEEEEEECCCCcHHHhccCchhHHHHHHHHHHHhHhcCCc-ccEEEEccCCEEEEEcCCC------CHHHHHHHHHHHH
Confidence 58999999999999998887665555566666666665544 5678889999999887321 2344455555666
Q ss_pred HhhccCCCCCCC-CCceeEEEEee
Q psy5058 290 AGSIMFPIPHRK-NERVQIRSGMH 312 (377)
Q Consensus 290 ~~~~~~~~~~~~-~~~l~irIGIh 312 (377)
..+......... ...+.+.|||.
T Consensus 106 ~~i~~~~~~~~~~~~~vt~SiGia 129 (179)
T 3tvk_A 106 QLVDNHAITHSEGHINITVTAGVS 129 (179)
T ss_dssp HHHHHSCEEETTEEECCCEEEEEE
T ss_pred HHHHcCCcccCCceEEEEEEEEEE
Confidence 555443221111 12345555553
No 22
>3icl_A EAL/ggdef domain protein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics, consortium, NESG; HET: MSE; 2.00A {Methylococcus capsulatus}
Probab=89.84 E-value=1.5 Score=36.45 Aligned_cols=59 Identities=15% Similarity=0.178 Sum_probs=49.3
Q ss_pred eeEEEEEEEcCCchhHhhhCChHHHHHHHHHHHHHHHHHhhhCCeEEEEEeCCeEEEEeC
Q psy5058 209 EAVTVYFSDIVGFTEIAAVSTPLEVVNFLNSIYKLFDARIEGYDVYKVETIGDSYMVASG 268 (377)
Q Consensus 209 ~~vTVLF~DI~gFT~ls~~~~p~elv~lLn~~~~~~~~ii~~~gG~~ik~iGD~~ma~fG 268 (377)
...++++.||.+|..+.+..+.+.-=.+|..+-..+...+.. +..+-++-||.++++..
T Consensus 29 ~~~~l~~i~id~f~~in~~~G~~~gd~~L~~~a~~L~~~~~~-~~~~~R~~~d~F~ill~ 87 (171)
T 3icl_A 29 NPVVLLFLDVDNFKSINDSLGHLVGDRLLRATAERIRTAVRD-GDTVARIGGDKFTILLN 87 (171)
T ss_dssp SCCEEEEEEETTHHHHHHHHCHHHHHHHHHHHHHHHHHHSCT-TCEEEEETTTEEEEEES
T ss_pred CcEEEEEEEChHhhHHHHHhChHHHHHHHHHHHHHHHHhcCC-CCEEEEecCCEEEEEec
Confidence 347899999999999999999888888888888888777754 56788899999988874
No 23
>3ezu_A Ggdef domain protein; multidomain protein of unknown function with GG domain, structural genomics, joint center for structural GE JCSG; 1.95A {Geobacter sulfurreducens}
Probab=89.81 E-value=3.6 Score=39.13 Aligned_cols=96 Identities=14% Similarity=0.071 Sum_probs=61.2
Q ss_pred eeEEEEEEEcCCchhHhhhCChHHHHHHHHHHHHHHHHHhhhCCeEEEEEeCCeEEEEeCCCCCCCchhHHHHHHHHHHH
Q psy5058 209 EAVTVYFSDIVGFTEIAAVSTPLEVVNFLNSIYKLFDARIEGYDVYKVETIGDSYMVASGLPMKNGDKHVSEIATMALDL 288 (377)
Q Consensus 209 ~~vTVLF~DI~gFT~ls~~~~p~elv~lLn~~~~~~~~ii~~~gG~~ik~iGD~~ma~fG~p~~~~d~~a~~a~~aAl~i 288 (377)
..+++++.||.+|..+.+..+.+.-=.+|..+-..+...+.. +..+-++-||.++++..- . ....+...+-.+
T Consensus 212 ~~~all~idId~fk~INd~~G~~~gD~lL~~va~~L~~~~~~-~d~v~R~ggdeF~ill~~--~----~~~~~~~~~~~l 284 (342)
T 3ezu_A 212 SNVGIMLIDLDYFKLVGDNYGHQTGDRILQLVAETITSHLRR-SDVVGRYDGDEFVVYLSP--V----EPASLRTVAENL 284 (342)
T ss_dssp CEEEEEEEEEEECCCCC-----CHHHHHHHHHHHHHHHTCCT-TCEEEECSSSEEEEEESS--C----CHHHHHHHHHHH
T ss_pred CcEEEEEEECCcHHHHHHhhChHHHHHHHHHHHHHHHHHCCC-CcEEEEEcCCEEEEEECC--C----CHHHHHHHHHHH
Confidence 458999999999999999888877777777777777776654 567888899999888732 2 123344444445
Q ss_pred HHhhccCCCCCCCCCceeEEEEeeec
Q psy5058 289 LAGSIMFPIPHRKNERVQIRSGMHTG 314 (377)
Q Consensus 289 ~~~~~~~~~~~~~~~~l~irIGIhtG 314 (377)
...+..... ...++.+.+|+..|
T Consensus 285 ~~~l~~~~~---~~~~~~~siGva~~ 307 (342)
T 3ezu_A 285 RRSIEEESA---RMVPVTASIGVAQG 307 (342)
T ss_dssp HHHHHHHTT---TTCCEEEEEEEEEE
T ss_pred HHHHhcccC---CccceEEEEEEEEE
Confidence 444443321 23467788887754
No 24
>3qyy_A Response regulator; C-DI-GMP, DGC, ggdef, competitive inhibition, xanthomonas Ca signaling protein-inhibitor complex; HET: C2E; 1.90A {Xanthomonas campestris PV}
Probab=89.12 E-value=2.9 Score=34.53 Aligned_cols=57 Identities=11% Similarity=0.096 Sum_probs=46.1
Q ss_pred eEEEEEEEcCCchhHhhhCChHHHHHHHHHHHHHHHHHhhhCCeEEEEEeCCeEEEEe
Q psy5058 210 AVTVYFSDIVGFTEIAAVSTPLEVVNFLNSIYKLFDARIEGYDVYKVETIGDSYMVAS 267 (377)
Q Consensus 210 ~vTVLF~DI~gFT~ls~~~~p~elv~lLn~~~~~~~~ii~~~gG~~ik~iGD~~ma~f 267 (377)
.+++++.||.+|..+.+..+.+.-=.+|..+-..+...+.. +..+-.+-||.++++.
T Consensus 42 ~~~l~~idid~f~~in~~~G~~~gd~~L~~ia~~L~~~~~~-~~~~~R~~~deF~il~ 98 (167)
T 3qyy_A 42 PFVLFVLDMDNLKPINDRFGHLAGDRVLVRLVESAYGWLGA-QDWIGRWGGDEFLIGV 98 (167)
T ss_dssp CCEEEEEEESSHHHHHHHHCHHHHHHHHHHHHHHHTTTCCT-TCEEEEEETTEEEEEE
T ss_pred cEEEEEEechhhhHHHhhcCcHHHHHHHHHHHHHHHHhcCC-CCEEEeecCceEEEEc
Confidence 47999999999999999999887777776666666655543 5678899999998887
No 25
>3bre_A Probable two-component response regulator; protein-nucleotide complex, signaling protein; HET: C2E; 2.40A {Pseudomonas aeruginosa} PDB: 3i5a_A*
Probab=89.08 E-value=2.5 Score=39.74 Aligned_cols=59 Identities=7% Similarity=0.019 Sum_probs=45.2
Q ss_pred eEEEEEEEcCCchhHhhhCChHHHHHHHHHHHHHHHHHhhhCCeEEEEEeCCeEEEEeC
Q psy5058 210 AVTVYFSDIVGFTEIAAVSTPLEVVNFLNSIYKLFDARIEGYDVYKVETIGDSYMVASG 268 (377)
Q Consensus 210 ~vTVLF~DI~gFT~ls~~~~p~elv~lLn~~~~~~~~ii~~~gG~~ik~iGD~~ma~fG 268 (377)
..+++++||.+|..+.+..+...--.+|..+...+.+.+...++.+..+-||.+++++.
T Consensus 202 ~~~l~~idid~fk~ind~~G~~~gD~~L~~va~~l~~~~~~~~~~~~R~ggdeF~ill~ 260 (358)
T 3bre_A 202 QLSLLMIDVDYFKSYNDTFGHVAGDEALRQVAGAIREGCSRSSDLAARYGGEEFAMVLP 260 (358)
T ss_dssp CEEEEEEEETTHHHHHHHHCHHHHHHHHHHHHHHHHTTCCSTTCEEEEEETTEEEEEEE
T ss_pred cEEEEEEEchhhhHHHHhcChHHHHHHHHHHHHHHHHhcCCcCcEEEEecCCeEEEEeC
Confidence 47899999999999988888766666666666666655544566788899999988874
No 26
>3hvw_A Diguanylate-cyclase (DGC); alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.70A {Pseudomonas aeruginosa}
Probab=87.41 E-value=0.91 Score=38.41 Aligned_cols=57 Identities=11% Similarity=-0.015 Sum_probs=49.1
Q ss_pred eEEEEEEEc---CCchhHhhhCChHHHHHHHHHHHHHHHHHhhhCCeEEEEEeCCeEEEEeC
Q psy5058 210 AVTVYFSDI---VGFTEIAAVSTPLEVVNFLNSIYKLFDARIEGYDVYKVETIGDSYMVASG 268 (377)
Q Consensus 210 ~vTVLF~DI---~gFT~ls~~~~p~elv~lLn~~~~~~~~ii~~~gG~~ik~iGD~~ma~fG 268 (377)
..++++.|| .+|..+.+..+.+.-=.+|..+-..+.+.+.. ..+-.+-||.++++..
T Consensus 27 ~~~l~~i~i~~id~f~~in~~~G~~~gD~~L~~ia~~L~~~~~~--~~v~R~~~deF~ill~ 86 (176)
T 3hvw_A 27 ALTVIAADLLPLALLNTIIRTLGYPFSNDLMLEARDRIRAELPD--FTLYKISPTRFGLLLP 86 (176)
T ss_dssp EEEEEEEECSCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCTT--SCEEEEETTEEEEEEE
T ss_pred CceEEEEEecCHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHCCC--CeEEEecCCEEEEEeC
Confidence 478899999 88999989999888888888888888888877 7888999999988874
No 27
>4akk_A Nitrate regulatory protein; transcription; 2.14A {Klebsiella oxytoca}
Probab=83.82 E-value=11 Score=37.18 Aligned_cols=58 Identities=24% Similarity=0.341 Sum_probs=42.9
Q ss_pred HHHHHHhhCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhhhcccc
Q psy5058 75 LREQIQMNNPISRSGETAIEYFDLMAKFTDELRKLQRELRSQIKKNVEADLENANNQE 132 (377)
Q Consensus 75 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~ 132 (377)
+++.+..+....+..-++..||+.+|.+||.++.+++.|.+.+...+......+.+.+
T Consensus 262 ~r~~~~~~~~~~~~~~~a~~Wf~~~T~rId~lr~vE~~L~~~l~~~a~~~~~~A~~~L 319 (423)
T 4akk_A 262 LRRVACTRQPPADEGETALRWFCAQTQRLEQLRGVEELLIVDLLNAADALLEGEEPEA 319 (423)
T ss_dssp HHHHHHSSCCCCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-----
T ss_pred HHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5555555444334556899999999999999999999999999999888888777654
No 28
>1w25_A Stalked-cell differentiation controlling protein; two-component system, ggdef domain, cyclic dinucleotide, cyclic-digmp; HET: C2E; 2.70A {Caulobacter vibrioides} SCOP: c.23.1.1 c.23.1.1 d.58.29.2 PDB: 2v0n_A* 2wb4_A*
Probab=83.36 E-value=4.9 Score=39.24 Aligned_cols=97 Identities=13% Similarity=0.062 Sum_probs=64.7
Q ss_pred eeEEEEEEEcCCchhHhhhCChHHHHHHHHHHHHHHHHHhhhCCeEEEEEeCCeEEEEeCCCCCCCchhHHHHHHHHHHH
Q psy5058 209 EAVTVYFSDIVGFTEIAAVSTPLEVVNFLNSIYKLFDARIEGYDVYKVETIGDSYMVASGLPMKNGDKHVSEIATMALDL 288 (377)
Q Consensus 209 ~~vTVLF~DI~gFT~ls~~~~p~elv~lLn~~~~~~~~ii~~~gG~~ik~iGD~~ma~fG~p~~~~d~~a~~a~~aAl~i 288 (377)
..++++++||-+|..+-+..+...-=.+|..+-..+...+.. +..+..+-||.++++..- . ....+...+-.+
T Consensus 318 ~~~~l~~idid~fk~iNd~~Gh~~gD~~L~~~a~~l~~~~~~-~d~~~R~ggdeF~il~~~--~----~~~~~~~~~~~i 390 (459)
T 1w25_A 318 DPVSALLIDIDFFKKINDTFGHDIGDEVLREFALRLASNVRA-IDLPCRYGGEEFVVIMPD--T----ALADALRIAERI 390 (459)
T ss_dssp CCCEEEEEEETTHHHHHHHSCHHHHHHHHHHHHHHHHHTSCT-TSEEEECSSSEEEEEETT--C----CHHHHHHHHHHH
T ss_pred CcEEEEEEEchhhchhhhccChhhHHHHHHHHHHHHHHhCCC-cCEEEEEcCceEEEEeCC--C----CHHHHHHHHHHH
Confidence 357899999999999999999887777777777777777654 557888999999988732 1 223444555556
Q ss_pred HHhhccCCCCCCC---CCceeEEEEee
Q psy5058 289 LAGSIMFPIPHRK---NERVQIRSGMH 312 (377)
Q Consensus 289 ~~~~~~~~~~~~~---~~~l~irIGIh 312 (377)
...+......... ...+.+.||+.
T Consensus 391 ~~~~~~~~~~~~~~~~~~~~t~siG~~ 417 (459)
T 1w25_A 391 RMHVSGSPFTVAHGREMLNVTISIGVS 417 (459)
T ss_dssp HHHHHTSCEECGGGSCEECCCEEEEEE
T ss_pred HHHHHhCCccccCCCceeEEEEEEEEE
Confidence 5555432221111 12455666654
No 29
>3ung_C CMR2DHD; ferredoxin fold, nucleotide-binding, polymerase, CMR complex function; HET: ADP; 2.31A {Pyrococcus furiosus} PDB: 3ur3_C 4doz_A
Probab=68.93 E-value=23 Score=37.00 Aligned_cols=96 Identities=9% Similarity=-0.005 Sum_probs=61.9
Q ss_pred HHHHHHHHHHHH-HHHHHhhhCCeEEEEEeCCeEEEEeCCCCCCCchhHHHHHHHHHHHHHhhccCCCCCCCCCceeEEE
Q psy5058 231 LEVVNFLNSIYK-LFDARIEGYDVYKVETIGDSYMVASGLPMKNGDKHVSEIATMALDLLAGSIMFPIPHRKNERVQIRS 309 (377)
Q Consensus 231 ~elv~lLn~~~~-~~~~ii~~~gG~~ik~iGD~~ma~fG~p~~~~d~~a~~a~~aAl~i~~~~~~~~~~~~~~~~l~irI 309 (377)
..+.+.|+.|+. .+..++ +++|.++-.=||-++++.. ...|..+|.++...+...-........+.+.+
T Consensus 465 aaLSRaL~~Ff~~~V~~Iv-k~~G~vIYaGGDDfL~llP---------~d~AlelAe~LRe~F~~~~t~~~~~~~ITiSa 534 (693)
T 3ung_C 465 VAISQALANFSIREVRSVV-KDEGLLIYAGGDDVLAILP---------VDKALEVAYKIRKEFGKSFENGSLLPGWKLSA 534 (693)
T ss_dssp HHHHHHHHHHHHTHHHHHH-TTSSEEEEECSSEEEEEEE---------HHHHHHHHHHHHHHHHTC---------CCEEE
T ss_pred HHHHHHHHHHHHHHHHHHH-hhCcEEEEEcCceEEEEee---------HHHHHHHHHHHHHHHHHHhccccCCCCceEEE
Confidence 466788999996 566666 6999999999999999983 46777888888877665311111123345555
Q ss_pred EeeeccEEEEEeCCCCCcceeeCcHHHHHHHHHh-cCCC
Q psy5058 310 GMHTGPVVAGIVGTKMPRYCLFGDTVNTASRMES-TGEA 347 (377)
Q Consensus 310 GIhtG~vv~G~iGs~~~~y~v~GdtVNiAsRLes-~a~~ 347 (377)
||.. +- .+ ..+......|..++. .|+.
T Consensus 535 GVAi----~~---~k----~Pl~~~le~AdeALy~~AK~ 562 (693)
T 3ung_C 535 GILI----VH---YK----HPLYDALEKARDLLNNKAKN 562 (693)
T ss_dssp EEEE----EE---TT----SCHHHHHHHHHHHHHHTGGG
T ss_pred EEEE----cc---CC----CCHHHHHHHHHHHHHHHhcC
Confidence 5442 21 22 235667888988888 6665
No 30
>3hvb_A Protein FIMX; EAL phosphodiesterase, biofilm, C-DI-GMP, hydrolase; 2.99A {Pseudomonas aeruginosa PAO1}
Probab=41.72 E-value=5.5 Score=38.88 Aligned_cols=60 Identities=8% Similarity=0.070 Sum_probs=0.0
Q ss_pred eeeEEEEEEEcCCchhHhhhCChHHHHHHHHHHHHHHHHHhhhCCeEEEEEeCCeEEEEeC
Q psy5058 208 YEAVTVYFSDIVGFTEIAAVSTPLEVVNFLNSIYKLFDARIEGYDVYKVETIGDSYMVASG 268 (377)
Q Consensus 208 ~~~vTVLF~DI~gFT~ls~~~~p~elv~lLn~~~~~~~~ii~~~gG~~ik~iGD~~ma~fG 268 (377)
....++++.||.+|..+-+..+...-=.+|..+-..+...+.. +..+-.+-||.+.+++.
T Consensus 42 ~~~~~l~~idid~fk~iNd~~G~~~gD~lL~~va~~L~~~~~~-~~~v~R~ggdeF~ill~ 101 (437)
T 3hvb_A 42 RKPSTLAYIHLNGYPSLQADHGLSGIDLLLGQLAGLMREQFGE-EADLARFGDSIFAALFK 101 (437)
T ss_dssp -------------------------------------------------------------
T ss_pred CCceEEEEEEcCcHHHHHHhhCchhHHHHHHHHHHHHHHhCCC-CceEEEecCCEEEEEeC
Confidence 3457899999999999999888776656666666666555543 45677788999888763
No 31
>2qv6_A MJ0145, GTP cyclohydrolase III, MJGC; enzyme, FAPY; HET: GTP; 2.00A {Methanocaldococcus jannaschii}
Probab=32.48 E-value=97 Score=28.48 Aligned_cols=56 Identities=9% Similarity=0.106 Sum_probs=47.1
Q ss_pred EEEEEcCCchhHhhhCChH---HHHHHHHHHHHHHHHHhhhCCeEEEEEeCCeEEEEeC
Q psy5058 213 VYFSDIVGFTEIAAVSTPL---EVVNFLNSIYKLFDARIEGYDVYKVETIGDSYMVASG 268 (377)
Q Consensus 213 VLF~DI~gFT~ls~~~~p~---elv~lLn~~~~~~~~ii~~~gG~~ik~iGD~~ma~fG 268 (377)
+.-+.|.|+-.|++.+.|. ++-.+=.+++..+.+.+..+||.+..+.=|-++|+.+
T Consensus 4 it~i~i~~Y~~WT~t~g~~RE~~lQ~lQs~l~~~l~~~~~~~~g~~f~~R~D~~ia~tn 62 (268)
T 2qv6_A 4 ITVIQIDNYGPWTVTPNPRRESDLQALQSRLYADLNLMFGAHKGLVFYTRFDNLIAITN 62 (268)
T ss_dssp EEEEEETTHHHHHHSSSCCCHHHHHHHHHHHHHHHHHHHHTTTCEEECTTSSEEEEECT
T ss_pred EEEEEEcCcccccCCCCchhHHHHHHHHHHHHHHHHHHHHhcCCEEeecccceEEEEeC
Confidence 4457899999999999873 4556667889999999999999999999999998874
Done!