BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5063
(681 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 186 bits (471), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 92/164 (56%), Positives = 113/164 (68%), Gaps = 25/164 (15%)
Query: 475 RIFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIY 534
RIFR SDL+ G +LG+G FGQ +VTHRETGEVMV+KEL R DEE ++ FLKE
Sbjct: 5 RIFRPSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKE------- 57
Query: 535 LIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ 594
V V+R L H NV++FIGVLYKD++LN +TEYI GGTL+ +++
Sbjct: 58 ------------------VKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIK 99
Query: 595 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
PW QRV+FA+DIA+GM YLHSMN+IHRDLNS NCLVRE
Sbjct: 100 SMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRE 143
>pdb|1X6A|A Chain A, Solution Structures Of The Second Lim Domain Of Human Lim-
Kinase 2 (limk2)
Length = 81
Score = 89.7 bits (221), Expect = 5e-18, Method: Composition-based stats.
Identities = 35/64 (54%), Positives = 46/64 (71%)
Query: 61 EDYNGKYGEACQNCGQMMSGPVMVVGDHKFHPECFKCTSCSCCIGDGESYALVERSILYC 120
+DY GK+GE C C +M+GP MV G+ K+HPECF C SC I DG++YALV+ + LYC
Sbjct: 8 KDYWGKFGEFCHGCSLLMTGPFMVAGEFKYHPECFACMSCKVIIEDGDAYALVQHATLYC 67
Query: 121 GLCY 124
G C+
Sbjct: 68 GKCH 71
Score = 28.9 bits (63), Expect = 10.0, Method: Composition-based stats.
Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 9/70 (12%)
Query: 12 CAGCLNNIVEDEYVQALSQEWHTDCFRCSACDVMLDNWYFEKDGLLFCKEDYNGKYGEAC 71
C GC + ++ ++ A ++H +CF C +C V+++ DG + + Y C
Sbjct: 18 CHGC-SLLMTGPFMVAGEFKYHPECFACMSCKVIIE------DGDAYALVQHATLYCGKC 70
Query: 72 QNCGQMMSGP 81
N +++SGP
Sbjct: 71 HN--EVVSGP 78
>pdb|2RGT|A Chain A, Crystal Structure Of Lhx3 Lim Domains 1 And 2 With The
Binding Domain Of Isl1
pdb|2RGT|B Chain B, Crystal Structure Of Lhx3 Lim Domains 1 And 2 With The
Binding Domain Of Isl1
Length = 169
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 66/127 (51%), Gaps = 4/127 (3%)
Query: 6 TPEILTCAGCLNNIVEDEYVQALSQEWHTDCFRCSACDVMLDNWYFEKDGLLFCKEDYNG 65
TPEI CAGC +I++ ++AL + WH+ C +CS C V L F + ++CK+D+
Sbjct: 3 TPEIPMCAGCDQHILDRFILKALDRHWHSKCLKCSDCHVPLAERCFSRGESVYCKDDFFK 62
Query: 66 KYGEACQNCGQMMSGPVMVV---GDHKFHPECFKCTSCSCCIGDGESYALVERSILYCGL 122
++G C C Q+ P VV D +H CF C C + G+ + L+E S L C
Sbjct: 63 RFGTKCAAC-QLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKA 121
Query: 123 CYKRQMQ 129
Y+ Q
Sbjct: 122 DYETAKQ 128
>pdb|2JTN|A Chain A, Nmr Solution Structure Of A Ldb1-Lid:lhx3-Lim Complex
Length = 182
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 66/127 (51%), Gaps = 4/127 (3%)
Query: 6 TPEILTCAGCLNNIVEDEYVQALSQEWHTDCFRCSACDVMLDNWYFEKDGLLFCKEDYNG 65
TPEI CAGC +I++ ++AL + WH+ C +CS C V L F + ++CK+D+
Sbjct: 57 TPEIPMCAGCDQHILDRFILKALDRHWHSKCLKCSDCHVPLAERCFSRGESVYCKDDFFK 116
Query: 66 KYGEACQNCGQMMSGPVMVV---GDHKFHPECFKCTSCSCCIGDGESYALVERSILYCGL 122
++G C C Q+ P VV D +H CF C C + G+ + L+E S L C
Sbjct: 117 RFGTKCAAC-QLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKA 175
Query: 123 CYKRQMQ 129
Y+ Q
Sbjct: 176 DYETAKQ 182
>pdb|3MMK|A Chain A, The Structural Basis For Partial Redundancy In A Class Of
Transcription Factors, The Lim-Homeodomain Proteins, In
Neural Cell Type Specification
pdb|3MMK|B Chain B, The Structural Basis For Partial Redundancy In A Class Of
Transcription Factors, The Lim-Homeodomain Proteins, In
Neural Cell Type Specification
Length = 169
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 65/125 (52%), Gaps = 4/125 (3%)
Query: 8 EILTCAGCLNNIVEDEYVQALSQEWHTDCFRCSACDVMLDNWYFEKDGLLFCKEDYNGKY 67
+I CAGC +I++ ++ L + WH+ C +C+ C + L + F + G ++CKED+ ++
Sbjct: 5 QIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDFFKRF 64
Query: 68 GEACQNCGQMMSGPVMVV---GDHKFHPECFKCTSCSCCIGDGESYALVERSILYCGLCY 124
G C C Q + P VV D +H CF C C+ + G+ + L+E L C Y
Sbjct: 65 GTKCTACQQGIP-PTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCKEDY 123
Query: 125 KRQMQ 129
+ Q
Sbjct: 124 ETAKQ 128
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 78/155 (50%), Gaps = 33/155 (21%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEK--NFLKESKQGLIYLIDLGSHGLIN 545
+G G FG V+R G + +K L D AE+ FL+E
Sbjct: 45 IGAGSFGTVHRAEWH--GSDVAVKILMEQDFHAERVNEFLRE------------------ 84
Query: 546 NLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPG--QPLPWG 603
VA+++ L H N++ F+G + + L++VTEY++ G+L LL G + L
Sbjct: 85 -------VAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDER 137
Query: 604 QRVNFARDIAAGMTYLHSMN--LIHRDLNSQNCLV 636
+R++ A D+A GM YLH+ N ++HRDL S N LV
Sbjct: 138 RRLSMAYDVAKGMNYLHNRNPPIVHRDLKSPNLLV 172
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 50/87 (57%)
Query: 550 FSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFA 609
+ ++ HHN+IR GV+ K + + ++TEY+ G L + L++ Q V
Sbjct: 94 LGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGML 153
Query: 610 RDIAAGMTYLHSMNLIHRDLNSQNCLV 636
R IAAGM YL +MN +HRDL ++N LV
Sbjct: 154 RGIAAGMKYLANMNYVHRDLAARNILV 180
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 78/155 (50%), Gaps = 33/155 (21%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEK--NFLKESKQGLIYLIDLGSHGLIN 545
+G G FG V+R G + +K L D AE+ FL+E
Sbjct: 45 IGAGSFGTVHRAEWH--GSDVAVKILMEQDFHAERVNEFLRE------------------ 84
Query: 546 NLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPG--QPLPWG 603
VA+++ L H N++ F+G + + L++VTEY++ G+L LL G + L
Sbjct: 85 -------VAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDER 137
Query: 604 QRVNFARDIAAGMTYLHSMN--LIHRDLNSQNCLV 636
+R++ A D+A GM YLH+ N ++HR+L S N LV
Sbjct: 138 RRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLV 172
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 84/188 (44%), Gaps = 34/188 (18%)
Query: 455 PACDLSRTRSRSFRVEASKSRIFRAS------DLVRGPLLGQGFFGQVYRVTHRETGEVM 508
P +LS +RSF +AS++ IF L G L+G+G FGQVY R GEV
Sbjct: 2 PEMNLSLLSARSFPRKASQTSIFLQEWDIPFEQLEIGELIGKGRFGQVYH--GRWHGEVA 59
Query: 509 V-LKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRF 567
+ L ++ R +E+ K F +E V R H NV+ F
Sbjct: 60 IRLIDIERDNEDQLKAFKRE-------------------------VMAYRQTRHENVVLF 94
Query: 568 IGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHR 627
+G L ++T G TL +++D L + A++I GM YLH+ ++H+
Sbjct: 95 MGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHK 154
Query: 628 DLNSQNCL 635
DL S+N
Sbjct: 155 DLKSKNVF 162
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 74/155 (47%), Gaps = 31/155 (20%)
Query: 488 LGQGFFGQV----YRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGL 543
LG+G FG V Y TGEV+ +K+L EE ++F +E
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE---------------- 64
Query: 544 INNLHCFSQVAVLRSLHHHNVIRFIGVLYK--DRKLNLVTEYIAGGTLKELLQDPGQPLP 601
+ +L+SL H N++++ GV Y R L L+ EY+ G+L++ LQ + +
Sbjct: 65 ---------IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERID 115
Query: 602 WGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
+ + + I GM YL + IHRDL ++N LV
Sbjct: 116 HIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV 150
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 74/155 (47%), Gaps = 31/155 (20%)
Query: 488 LGQGFFGQV----YRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGL 543
LG+G FG V Y TGEV+ +K+L EE ++F +E
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE---------------- 92
Query: 544 INNLHCFSQVAVLRSLHHHNVIRFIGVLYK--DRKLNLVTEYIAGGTLKELLQDPGQPLP 601
+ +L+SL H N++++ GV Y R L L+ EY+ G+L++ LQ + +
Sbjct: 93 ---------IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID 143
Query: 602 WGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
+ + + I GM YL + IHRDL ++N LV
Sbjct: 144 HIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV 178
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 74/155 (47%), Gaps = 31/155 (20%)
Query: 488 LGQGFFGQV----YRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGL 543
LG+G FG V Y TGEV+ +K+L EE ++F +E
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE---------------- 66
Query: 544 INNLHCFSQVAVLRSLHHHNVIRFIGVLYK--DRKLNLVTEYIAGGTLKELLQDPGQPLP 601
+ +L+SL H N++++ GV Y R L L+ EY+ G+L++ LQ + +
Sbjct: 67 ---------IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID 117
Query: 602 WGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
+ + + I GM YL + IHRDL ++N LV
Sbjct: 118 HIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV 152
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 74/155 (47%), Gaps = 31/155 (20%)
Query: 488 LGQGFFGQV----YRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGL 543
LG+G FG V Y TGEV+ +K+L EE ++F +E
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE---------------- 61
Query: 544 INNLHCFSQVAVLRSLHHHNVIRFIGVLYK--DRKLNLVTEYIAGGTLKELLQDPGQPLP 601
+ +L+SL H N++++ GV Y R L L+ EY+ G+L++ LQ + +
Sbjct: 62 ---------IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID 112
Query: 602 WGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
+ + + I GM YL + IHRDL ++N LV
Sbjct: 113 HIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV 147
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 74/155 (47%), Gaps = 31/155 (20%)
Query: 488 LGQGFFGQV----YRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGL 543
LG+G FG V Y TGEV+ +K+L EE ++F +E
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE---------------- 60
Query: 544 INNLHCFSQVAVLRSLHHHNVIRFIGVLYK--DRKLNLVTEYIAGGTLKELLQDPGQPLP 601
+ +L+SL H N++++ GV Y R L L+ EY+ G+L++ LQ + +
Sbjct: 61 ---------IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID 111
Query: 602 WGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
+ + + I GM YL + IHRDL ++N LV
Sbjct: 112 HIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV 146
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 74/155 (47%), Gaps = 31/155 (20%)
Query: 488 LGQGFFGQV----YRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGL 543
LG+G FG V Y TGEV+ +K+L EE ++F +E
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE---------------- 67
Query: 544 INNLHCFSQVAVLRSLHHHNVIRFIGVLYK--DRKLNLVTEYIAGGTLKELLQDPGQPLP 601
+ +L+SL H N++++ GV Y R L L+ EY+ G+L++ LQ + +
Sbjct: 68 ---------IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID 118
Query: 602 WGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
+ + + I GM YL + IHRDL ++N LV
Sbjct: 119 HIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV 153
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 74/155 (47%), Gaps = 31/155 (20%)
Query: 488 LGQGFFGQV----YRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGL 543
LG+G FG V Y TGEV+ +K+L EE ++F +E
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE---------------- 64
Query: 544 INNLHCFSQVAVLRSLHHHNVIRFIGVLYK--DRKLNLVTEYIAGGTLKELLQDPGQPLP 601
+ +L+SL H N++++ GV Y R L L+ EY+ G+L++ LQ + +
Sbjct: 65 ---------IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID 115
Query: 602 WGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
+ + + I GM YL + IHRDL ++N LV
Sbjct: 116 HIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV 150
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 74/155 (47%), Gaps = 31/155 (20%)
Query: 488 LGQGFFGQV----YRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGL 543
LG+G FG V Y TGEV+ +K+L EE ++F +E
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE---------------- 68
Query: 544 INNLHCFSQVAVLRSLHHHNVIRFIGVLYK--DRKLNLVTEYIAGGTLKELLQDPGQPLP 601
+ +L+SL H N++++ GV Y R L L+ EY+ G+L++ LQ + +
Sbjct: 69 ---------IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID 119
Query: 602 WGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
+ + + I GM YL + IHRDL ++N LV
Sbjct: 120 HIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV 154
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 74/155 (47%), Gaps = 31/155 (20%)
Query: 488 LGQGFFGQV----YRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGL 543
LG+G FG V Y TGEV+ +K+L EE ++F +E
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE---------------- 65
Query: 544 INNLHCFSQVAVLRSLHHHNVIRFIGVLYK--DRKLNLVTEYIAGGTLKELLQDPGQPLP 601
+ +L+SL H N++++ GV Y R L L+ EY+ G+L++ LQ + +
Sbjct: 66 ---------IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID 116
Query: 602 WGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
+ + + I GM YL + IHRDL ++N LV
Sbjct: 117 HIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV 151
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 74/155 (47%), Gaps = 31/155 (20%)
Query: 488 LGQGFFGQV----YRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGL 543
LG+G FG V Y TGEV+ +K+L EE ++F +E
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE---------------- 59
Query: 544 INNLHCFSQVAVLRSLHHHNVIRFIGVLYK--DRKLNLVTEYIAGGTLKELLQDPGQPLP 601
+ +L+SL H N++++ GV Y R L L+ EY+ G+L++ LQ + +
Sbjct: 60 ---------IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID 110
Query: 602 WGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
+ + + I GM YL + IHRDL ++N LV
Sbjct: 111 HIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV 145
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 74/155 (47%), Gaps = 31/155 (20%)
Query: 488 LGQGFFGQV----YRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGL 543
LG+G FG V Y TGEV+ +K+L EE ++F +E
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE---------------- 64
Query: 544 INNLHCFSQVAVLRSLHHHNVIRFIGVLYK--DRKLNLVTEYIAGGTLKELLQDPGQPLP 601
+ +L+SL H N++++ GV Y R L L+ E++ G+L+E LQ + +
Sbjct: 65 ---------IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERID 115
Query: 602 WGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
+ + + I GM YL + IHRDL ++N LV
Sbjct: 116 HIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV 150
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 74/155 (47%), Gaps = 31/155 (20%)
Query: 488 LGQGFFGQV----YRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGL 543
LG+G FG V Y TGEV+ +K+L EE ++F +E
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE---------------- 61
Query: 544 INNLHCFSQVAVLRSLHHHNVIRFIGVLYK--DRKLNLVTEYIAGGTLKELLQDPGQPLP 601
+ +L+SL H N++++ GV Y R L L+ EY+ G+L++ LQ + +
Sbjct: 62 ---------IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID 112
Query: 602 WGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
+ + + I GM YL + IHRDL ++N LV
Sbjct: 113 HIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV 147
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 74/155 (47%), Gaps = 31/155 (20%)
Query: 488 LGQGFFGQV----YRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGL 543
LG+G FG V Y TGEV+ +K+L EE ++F +E
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE---------------- 61
Query: 544 INNLHCFSQVAVLRSLHHHNVIRFIGVLYK--DRKLNLVTEYIAGGTLKELLQDPGQPLP 601
+ +L+SL H N++++ GV Y R L L+ EY+ G+L++ LQ + +
Sbjct: 62 ---------IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID 112
Query: 602 WGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
+ + + I GM YL + IHRDL ++N LV
Sbjct: 113 HIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV 147
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 74/155 (47%), Gaps = 31/155 (20%)
Query: 488 LGQGFFGQV----YRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGL 543
LG+G FG V Y TGEV+ +K+L EE ++F +E
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE---------------- 79
Query: 544 INNLHCFSQVAVLRSLHHHNVIRFIGVLYK--DRKLNLVTEYIAGGTLKELLQDPGQPLP 601
+ +L+SL H N++++ GV Y R L L+ EY+ G+L++ LQ + +
Sbjct: 80 ---------IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID 130
Query: 602 WGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
+ + + I GM YL + IHRDL ++N LV
Sbjct: 131 HIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV 165
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 82/189 (43%), Gaps = 47/189 (24%)
Query: 481 DLVRGPLLGQGFFGQVY-----RVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYL 535
D+V LG+G FG+V+ + + ++ +K L E A ++F +E++
Sbjct: 19 DIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAE------ 72
Query: 536 IDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD 595
+L L H +++RF GV + R L +V EY+ G L L+
Sbjct: 73 -------------------LLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRS 113
Query: 596 PGQ--------------PLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS 641
G PL GQ + A +AAGM YL ++ +HRDL ++NCL VG
Sbjct: 114 HGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCL---VGQ 170
Query: 642 GFDFHLGQI 650
G +G
Sbjct: 171 GLVVKIGDF 179
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 74/155 (47%), Gaps = 31/155 (20%)
Query: 488 LGQGFFGQV----YRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGL 543
LG+G FG V Y TGEV+ +K+L EE ++F +E
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE---------------- 79
Query: 544 INNLHCFSQVAVLRSLHHHNVIRFIGVLYK--DRKLNLVTEYIAGGTLKELLQDPGQPLP 601
+ +L+SL H N++++ GV Y R L L+ EY+ G+L++ LQ + +
Sbjct: 80 ---------IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID 130
Query: 602 WGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
+ + + I GM YL + IHRDL ++N LV
Sbjct: 131 HIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV 165
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 82/189 (43%), Gaps = 47/189 (24%)
Query: 481 DLVRGPLLGQGFFGQVY-----RVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYL 535
D+V LG+G FG+V+ + + ++ +K L E A ++F +E++
Sbjct: 13 DIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAE------ 66
Query: 536 IDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD 595
+L L H +++RF GV + R L +V EY+ G L L+
Sbjct: 67 -------------------LLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRS 107
Query: 596 PGQ--------------PLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS 641
G PL GQ + A +AAGM YL ++ +HRDL ++NCL VG
Sbjct: 108 HGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCL---VGQ 164
Query: 642 GFDFHLGQI 650
G +G
Sbjct: 165 GLVVKIGDF 173
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 75/160 (46%), Gaps = 32/160 (20%)
Query: 488 LGQGFFGQVYRVTHRE--TGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLIN 545
LGQG FG VY R+ GE + V+E A L
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA---------------------SLRE 63
Query: 546 NLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ--------DPG 597
+ ++ +V++ H+V+R +GV+ K + +V E +A G LK L+ +PG
Sbjct: 64 RIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPG 123
Query: 598 QPLPWGQR-VNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
+P P Q + A +IA GM YL++ +HRDL ++NC+V
Sbjct: 124 RPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMV 163
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 75/160 (46%), Gaps = 32/160 (20%)
Query: 488 LGQGFFGQVYRVTHRE--TGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLIN 545
LGQG FG VY R+ GE + V+E A L
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA---------------------SLRE 63
Query: 546 NLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ--------DPG 597
+ ++ +V++ H+V+R +GV+ K + +V E +A G LK L+ +PG
Sbjct: 64 RIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPG 123
Query: 598 QPLPWGQR-VNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
+P P Q + A +IA GM YL++ +HRDL ++NC+V
Sbjct: 124 RPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMV 163
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 75/160 (46%), Gaps = 32/160 (20%)
Query: 488 LGQGFFGQVYRVTHRE--TGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLIN 545
LGQG FG VY R+ GE + V+E A L
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA---------------------SLRE 62
Query: 546 NLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ--------DPG 597
+ ++ +V++ H+V+R +GV+ K + +V E +A G LK L+ +PG
Sbjct: 63 RIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPG 122
Query: 598 QPLPWGQR-VNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
+P P Q + A +IA GM YL++ +HRDL ++NC+V
Sbjct: 123 RPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMV 162
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 75/160 (46%), Gaps = 32/160 (20%)
Query: 488 LGQGFFGQVYRVTHRE--TGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLIN 545
LGQG FG VY R+ GE + V+E A L
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA---------------------SLRE 63
Query: 546 NLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ--------DPG 597
+ ++ +V++ H+V+R +GV+ K + +V E +A G LK L+ +PG
Sbjct: 64 RIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPG 123
Query: 598 QPLPWGQR-VNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
+P P Q + A +IA GM YL++ +HRDL ++NC+V
Sbjct: 124 RPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMV 163
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 75/160 (46%), Gaps = 32/160 (20%)
Query: 488 LGQGFFGQVYRVTHRE--TGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLIN 545
LGQG FG VY R+ GE + V+E A L
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA---------------------SLRE 60
Query: 546 NLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ--------DPG 597
+ ++ +V++ H+V+R +GV+ K + +V E +A G LK L+ +PG
Sbjct: 61 RIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPG 120
Query: 598 QPLPWGQR-VNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
+P P Q + A +IA GM YL++ +HRDL ++NC+V
Sbjct: 121 RPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMV 160
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 82/189 (43%), Gaps = 47/189 (24%)
Query: 481 DLVRGPLLGQGFFGQVY-----RVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYL 535
D+V LG+G FG+V+ + + ++ +K L E A ++F +E++
Sbjct: 42 DIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAE------ 95
Query: 536 IDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD 595
+L L H +++RF GV + R L +V EY+ G L L+
Sbjct: 96 -------------------LLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRS 136
Query: 596 PGQ--------------PLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS 641
G PL GQ + A +AAGM YL ++ +HRDL ++NCL VG
Sbjct: 137 HGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCL---VGQ 193
Query: 642 GFDFHLGQI 650
G +G
Sbjct: 194 GLVVKIGDF 202
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 75/160 (46%), Gaps = 32/160 (20%)
Query: 488 LGQGFFGQVYRVTHRE--TGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLIN 545
LGQG FG VY R+ GE + V+E A L
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA---------------------SLRE 63
Query: 546 NLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ--------DPG 597
+ ++ +V++ H+V+R +GV+ K + +V E +A G LK L+ +PG
Sbjct: 64 RIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPG 123
Query: 598 QPLPWGQR-VNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
+P P Q + A +IA GM YL++ +HRDL ++NC+V
Sbjct: 124 RPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMV 163
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 76/161 (47%), Gaps = 29/161 (18%)
Query: 479 ASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDL 538
AS+++ +G G FG VY+ + G+V V K L VD E+
Sbjct: 35 ASEVMLSTRIGSGSFGTVYK--GKWHGDVAV-KILKVVDPTPEQ---------------- 75
Query: 539 GSHGLINNLHCF-SQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPG 597
F ++VAVLR H N++ F+G + KD L +VT++ G +L + L
Sbjct: 76 --------FQAFRNEVAVLRKTRHVNILLFMGYMTKD-NLAIVTQWCEGSSLYKHLHVQE 126
Query: 598 QPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
Q ++ AR A GM YLH+ N+IHRD+ S N + E
Sbjct: 127 TKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHE 167
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 74/155 (47%), Gaps = 31/155 (20%)
Query: 488 LGQGFFGQV----YRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGL 543
LG+G FG V Y TGEV+ +K+L EE ++F +E
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE---------------- 62
Query: 544 INNLHCFSQVAVLRSLHHHNVIRFIGVLYK--DRKLNLVTEYIAGGTLKELLQDPGQPLP 601
+ +L+SL H N++++ GV Y R L L+ EY+ G+L++ LQ + +
Sbjct: 63 ---------IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID 113
Query: 602 WGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
+ + + I GM YL + IHR+L ++N LV
Sbjct: 114 HIKLLQYTSQICKGMEYLGTKRYIHRNLATRNILV 148
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 75/160 (46%), Gaps = 32/160 (20%)
Query: 488 LGQGFFGQVYRVTHRE--TGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLIN 545
LGQG FG VY R+ GE + V+E A L
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA---------------------SLRE 63
Query: 546 NLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ--------DPG 597
+ ++ +V++ H+V+R +GV+ K + +V E +A G LK L+ +PG
Sbjct: 64 RIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPG 123
Query: 598 QPLPWGQR-VNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
+P P Q + A +IA GM YL++ +HR+L ++NC+V
Sbjct: 124 RPPPTLQEMIQMAAEIADGMAYLNAKKFVHRNLAARNCMV 163
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 75/160 (46%), Gaps = 32/160 (20%)
Query: 488 LGQGFFGQVYRVTHRE--TGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLIN 545
LGQG FG VY R+ GE + V+E A L
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA---------------------SLRE 64
Query: 546 NLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ--------DPG 597
+ ++ +V++ H+V+R +GV+ K + +V E +A G LK L+ +PG
Sbjct: 65 RIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPG 124
Query: 598 QPLPWGQR-VNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
+P P Q + A +IA GM YL++ +HR+L ++NC+V
Sbjct: 125 RPPPTLQEMIQMAAEIADGMAYLNAKKFVHRNLAARNCMV 164
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 73/164 (44%), Gaps = 26/164 (15%)
Query: 476 IFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYR-VDEEAEKNFLKESKQGLIY 534
+ DLV G +G+G FG+V+ R ++ +K + + + FL+E++
Sbjct: 110 VLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEAR----- 164
Query: 535 LIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ 594
+L+ H N++R IGV + + + +V E + GG L+
Sbjct: 165 --------------------ILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLR 204
Query: 595 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
G L + D AAGM YL S IHRDL ++NCLV E
Sbjct: 205 TEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTE 248
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 73/164 (44%), Gaps = 26/164 (15%)
Query: 476 IFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYR-VDEEAEKNFLKESKQGLIY 534
+ DLV G +G+G FG+V+ R ++ +K + + + FL+E++
Sbjct: 110 VLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEAR----- 164
Query: 535 LIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ 594
+L+ H N++R IGV + + + +V E + GG L+
Sbjct: 165 --------------------ILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLR 204
Query: 595 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
G L + D AAGM YL S IHRDL ++NCLV E
Sbjct: 205 TEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTE 248
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 75/156 (48%), Gaps = 30/156 (19%)
Query: 488 LGQGFFGQV----YRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGL 543
LG+G FG+V Y TGE + +K L + + G ++ DL
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSL-------------KPESGGNHIADLKK--- 72
Query: 544 INNLHCFSQVAVLRSLHHHNVIRFIGVLYKD--RKLNLVTEYIAGGTLKELLQDPGQPLP 601
++ +LR+L+H N++++ G+ +D + L+ E++ G+LKE L +
Sbjct: 73 --------EIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKIN 124
Query: 602 WGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVR 637
Q++ +A I GM YL S +HRDL ++N LV
Sbjct: 125 LKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVE 160
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 75/156 (48%), Gaps = 30/156 (19%)
Query: 488 LGQGFFGQV----YRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGL 543
LG+G FG+V Y TGE + +K L + + G ++ DL
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSL-------------KPESGGNHIADLKK--- 60
Query: 544 INNLHCFSQVAVLRSLHHHNVIRFIGVLYKD--RKLNLVTEYIAGGTLKELLQDPGQPLP 601
++ +LR+L+H N++++ G+ +D + L+ E++ G+LKE L +
Sbjct: 61 --------EIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKIN 112
Query: 602 WGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVR 637
Q++ +A I GM YL S +HRDL ++N LV
Sbjct: 113 LKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVE 148
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 78/168 (46%), Gaps = 42/168 (25%)
Query: 488 LGQGFFGQV-----YRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHG 542
LG+G FG+V Y + + ++ +K L + A K+F +E++
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAE------------- 67
Query: 543 LINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-------- 594
+L +L H ++++F GV + L +V EY+ G L + L+
Sbjct: 68 ------------LLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVL 115
Query: 595 ----DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
+P L Q ++ A+ IAAGM YL S + +HRDL ++NCLV E
Sbjct: 116 MAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGE 163
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 82/157 (52%), Gaps = 29/157 (18%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
+G+G +G VY+ ++ TGEV+ LK++ R+D E E G+ +
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETE--------------------GVPST- 51
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP---GQPLPWGQ 604
++++L+ L+H N+++ + V++ + KL LV E+++ LK+ + G PLP +
Sbjct: 52 -AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMD-LKDFMDASALTGIPLPLIK 109
Query: 605 RVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS 641
F + G+ + HS ++HRDL QN L+ G+
Sbjct: 110 SYLF--QLLQGLAFCHSHRVLHRDLKPQNLLINTEGA 144
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 89/198 (44%), Gaps = 43/198 (21%)
Query: 457 CDLSRTRSRSFRVEASKSRIFRASDLVRGPLLGQGFFGQVYR-----VTHRETGEVMVLK 511
C +T S S E + I L+RG LG G FG+VY + + + + +K
Sbjct: 28 CFAGKTSSISDLKEVPRKNI----TLIRG--LGHGAFGEVYEGQVSGMPNDPSPLQVAVK 81
Query: 512 ELYRV-DEEAEKNFLKESKQGLIYLIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGV 570
L V E+ E +FL E+ ++ L+H N++R IGV
Sbjct: 82 TLPEVCSEQDELDFLMEA-------------------------LIISKLNHQNIVRCIGV 116
Query: 571 LYKDRKLNLVTEYIAGGTLKELLQD----PGQP--LPWGQRVNFARDIAAGMTYLHSMNL 624
+ ++ E +AGG LK L++ P QP L ++ ARDIA G YL +
Sbjct: 117 SLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHF 176
Query: 625 IHRDLNSQNCLVREVGSG 642
IHRD+ ++NCL+ G G
Sbjct: 177 IHRDIAARNCLLTCPGPG 194
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 82/157 (52%), Gaps = 29/157 (18%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
+G+G +G VY+ ++ TGEV+ LK++ R+D E E G+ +
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETE--------------------GVPST- 50
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP---GQPLPWGQ 604
++++L+ L+H N+++ + V++ + KL LV E+++ LK+ + G PLP +
Sbjct: 51 -AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMD-LKDFMDASALTGIPLPLIK 108
Query: 605 RVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS 641
F + G+ + HS ++HRDL QN L+ G+
Sbjct: 109 SYLF--QLLQGLAFCHSHRVLHRDLKPQNLLINTEGA 143
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 51/95 (53%)
Query: 542 GLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLP 601
G ++ F + + L H +++F GV K+ + +VTEYI+ G L L+ G+ L
Sbjct: 43 GSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLE 102
Query: 602 WGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
Q + D+ GM +L S IHRDL ++NCLV
Sbjct: 103 PSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLV 137
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 82/170 (48%), Gaps = 26/170 (15%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
+G+G +G V++ +RET E++ LK + R+D++ E G+ ++
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRV-RLDDDDE--------------------GVPSS- 47
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
++ +L+ L H N++R VL+ D+KL LV E+ LK+ L +
Sbjct: 48 -ALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF-CDQDLKKYFDSCNGDLDPEIVKS 105
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS--GFDFHLGQIYLIYV 655
F + G+ + HS N++HRDL QN L+ G DF L + + I V
Sbjct: 106 FLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPV 155
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 54/103 (52%), Gaps = 2/103 (1%)
Query: 550 FSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFA 609
+ +++ H N+IR GV+ K + + +VTEY+ G+L L+ Q V
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML 153
Query: 610 RDIAAGMTYLHSMNLIHRDLNSQNCLVRE--VGSGFDFHLGQI 650
R IA+GM YL M +HRDL ++N L+ V DF LG++
Sbjct: 154 RGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRV 196
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 84/172 (48%), Gaps = 32/172 (18%)
Query: 471 ASKSRIFRASDLVRGPLLGQGFFGQV----YRVTHRETGEVMVLKELYRVDEEAEKNFLK 526
AS +F L + LG+G FG+V Y T+ TGE++ +K L + +
Sbjct: 5 ASDPTVFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKAL-------KADCGP 57
Query: 527 ESKQGLIYLIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYK--DRKLNLVTEYI 584
+ + G ID +LR+L+H ++I++ G ++ L LV EY+
Sbjct: 58 QHRSGWKQEID-----------------ILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYV 100
Query: 585 AGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
G+L++ L P + Q + FA+ I GM YLHS + IHR+L ++N L+
Sbjct: 101 PLGSLRDYL--PRHSIGLAQLLLFAQQICEGMAYLHSQHYIHRNLAARNVLL 150
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 82/157 (52%), Gaps = 29/157 (18%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
+G+G +G VY+ ++ TGEV+ LK++ R+D E E G+ +
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETE--------------------GVPST- 48
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP---GQPLPWGQ 604
++++L+ L+H N+++ + V++ + KL LV E++ LK+ + G PLP +
Sbjct: 49 -AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIK 106
Query: 605 RVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS 641
F + G+++ HS ++HRDL QN L+ G+
Sbjct: 107 SYLF--QLLQGLSFCHSHRVLHRDLKPQNLLINTEGA 141
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 88/198 (44%), Gaps = 43/198 (21%)
Query: 457 CDLSRTRSRSFRVEASKSRIFRASDLVRGPLLGQGFFGQVYR-----VTHRETGEVMVLK 511
C +T S S E + I L+RG LG G FG+VY + + + + +K
Sbjct: 13 CFAGKTSSISDLKEVPRKNI----TLIRG--LGHGAFGEVYEGQVSGMPNDPSPLQVAVK 66
Query: 512 ELYRV-DEEAEKNFLKESKQGLIYLIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGV 570
L V E+ E +FL E+ ++ +H N++R IGV
Sbjct: 67 TLPEVCSEQDELDFLMEA-------------------------LIISKFNHQNIVRCIGV 101
Query: 571 LYKDRKLNLVTEYIAGGTLKELLQD----PGQP--LPWGQRVNFARDIAAGMTYLHSMNL 624
+ ++ E +AGG LK L++ P QP L ++ ARDIA G YL +
Sbjct: 102 SLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHF 161
Query: 625 IHRDLNSQNCLVREVGSG 642
IHRD+ ++NCL+ G G
Sbjct: 162 IHRDIAARNCLLTCPGPG 179
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 81/173 (46%), Gaps = 39/173 (22%)
Query: 482 LVRGPLLGQGFFGQVYR-----VTHRETGEVMVLKELYRV-DEEAEKNFLKESKQGLIYL 535
L+RG LG G FG+VY + + + + +K L V E+ E +FL E+
Sbjct: 35 LIRG--LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEA------- 85
Query: 536 IDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD 595
++ L+H N++R IGV + ++ E +AGG LK L++
Sbjct: 86 ------------------LIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRE 127
Query: 596 ----PGQP--LPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGSG 642
P QP L ++ ARDIA G YL + IHRD+ ++NCL+ G G
Sbjct: 128 TRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPG 180
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 88/198 (44%), Gaps = 43/198 (21%)
Query: 457 CDLSRTRSRSFRVEASKSRIFRASDLVRGPLLGQGFFGQVYR-----VTHRETGEVMVLK 511
C +T S S E + I L+RG LG G FG+VY + + + + +K
Sbjct: 5 CFAGKTSSISDLKEVPRKNI----TLIRG--LGHGAFGEVYEGQVSGMPNDPSPLQVAVK 58
Query: 512 ELYRV-DEEAEKNFLKESKQGLIYLIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGV 570
L V E+ E +FL E+ ++ +H N++R IGV
Sbjct: 59 TLPEVCSEQDELDFLMEA-------------------------LIISKFNHQNIVRCIGV 93
Query: 571 LYKDRKLNLVTEYIAGGTLKELLQD----PGQP--LPWGQRVNFARDIAAGMTYLHSMNL 624
+ ++ E +AGG LK L++ P QP L ++ ARDIA G YL +
Sbjct: 94 SLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHF 153
Query: 625 IHRDLNSQNCLVREVGSG 642
IHRD+ ++NCL+ G G
Sbjct: 154 IHRDIAARNCLLTCPGPG 171
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 88/198 (44%), Gaps = 43/198 (21%)
Query: 457 CDLSRTRSRSFRVEASKSRIFRASDLVRGPLLGQGFFGQVYR-----VTHRETGEVMVLK 511
C +T S S E + I L+RG LG G FG+VY + + + + +K
Sbjct: 28 CFAGKTSSISDLKEVPRKNI----TLIRG--LGHGAFGEVYEGQVSGMPNDPSPLQVAVK 81
Query: 512 ELYRV-DEEAEKNFLKESKQGLIYLIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGV 570
L V E+ E +FL E+ ++ +H N++R IGV
Sbjct: 82 TLPEVCSEQDELDFLMEA-------------------------LIISKFNHQNIVRCIGV 116
Query: 571 LYKDRKLNLVTEYIAGGTLKELLQD----PGQP--LPWGQRVNFARDIAAGMTYLHSMNL 624
+ ++ E +AGG LK L++ P QP L ++ ARDIA G YL +
Sbjct: 117 SLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHF 176
Query: 625 IHRDLNSQNCLVREVGSG 642
IHRD+ ++NCL+ G G
Sbjct: 177 IHRDIAARNCLLTCPGPG 194
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 88/198 (44%), Gaps = 43/198 (21%)
Query: 457 CDLSRTRSRSFRVEASKSRIFRASDLVRGPLLGQGFFGQVYR-----VTHRETGEVMVLK 511
C +T S S E + I L+RG LG G FG+VY + + + + +K
Sbjct: 13 CFAGKTSSISDLKEVPRKNI----TLIRG--LGHGAFGEVYEGQVSGMPNDPSPLQVAVK 66
Query: 512 ELYRV-DEEAEKNFLKESKQGLIYLIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGV 570
L V E+ E +FL E+ ++ +H N++R IGV
Sbjct: 67 TLPEVCSEQDELDFLMEA-------------------------LIISKFNHQNIVRCIGV 101
Query: 571 LYKDRKLNLVTEYIAGGTLKELLQD----PGQP--LPWGQRVNFARDIAAGMTYLHSMNL 624
+ ++ E +AGG LK L++ P QP L ++ ARDIA G YL +
Sbjct: 102 SLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHF 161
Query: 625 IHRDLNSQNCLVREVGSG 642
IHRD+ ++NCL+ G G
Sbjct: 162 IHRDIAARNCLLTCPGPG 179
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 56/98 (57%), Gaps = 1/98 (1%)
Query: 542 GLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-DPGQPL 600
G ++ + ++++L H ++R V+ ++ + ++TEY+A G+L + L+ D G +
Sbjct: 48 GTMSVQAFLEEANLMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKV 107
Query: 601 PWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
+ ++F+ IA GM Y+ N IHRDL + N LV E
Sbjct: 108 LLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSE 145
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 81/157 (51%), Gaps = 29/157 (18%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
+G+G +G VY+ ++ TGEV+ LK++ R+D E E G+ +
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETE--------------------GVPST- 48
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP---GQPLPWGQ 604
++++L+ L+H N+++ + V++ + KL LV E++ LK+ + G PLP +
Sbjct: 49 -AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIK 106
Query: 605 RVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS 641
F + G+ + HS ++HRDL QN L+ G+
Sbjct: 107 SYLF--QLLQGLAFCHSHRVLHRDLKPQNLLINTEGA 141
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 75/154 (48%), Gaps = 24/154 (15%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
+G+G +G V++ +RET E++ LK + R+D++ E G+ ++
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRV-RLDDDDE--------------------GVPSS- 47
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
++ +L+ L H N++R VL+ D+KL LV E+ LK+ L +
Sbjct: 48 -ALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF-CDQDLKKYFDSCNGDLDPEIVKS 105
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS 641
F + G+ + HS N++HRDL QN L+ G
Sbjct: 106 FLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGE 139
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 81/157 (51%), Gaps = 29/157 (18%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
+G+G +G VY+ ++ TGEV+ LK++ R+D E E G+ +
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETE--------------------GVPST- 47
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP---GQPLPWGQ 604
++++L+ L+H N+++ + V++ + KL LV E++ LK+ + G PLP +
Sbjct: 48 -AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIK 105
Query: 605 RVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS 641
F + G+ + HS ++HRDL QN L+ G+
Sbjct: 106 SYLF--QLLQGLAFCHSHRVLHRDLKPQNLLINTEGA 140
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 81/157 (51%), Gaps = 29/157 (18%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
+G+G +G VY+ ++ TGEV+ LK++ R+D E E G+ +
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETE--------------------GVPST- 48
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP---GQPLPWGQ 604
++++L+ L+H N+++ + V++ + KL LV E++ LK+ + G PLP +
Sbjct: 49 -AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIK 106
Query: 605 RVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS 641
F + G+ + HS ++HRDL QN L+ G+
Sbjct: 107 SYLF--QLLQGLAFCHSHRVLHRDLKPQNLLINTEGA 141
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 81/157 (51%), Gaps = 29/157 (18%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
+G+G +G VY+ ++ TGEV+ LK++ R+D E E G+ +
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETE--------------------GVPST- 47
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP---GQPLPWGQ 604
++++L+ L+H N+++ + V++ + KL LV E++ LK+ + G PLP +
Sbjct: 48 -AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIK 105
Query: 605 RVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS 641
F + G+ + HS ++HRDL QN L+ G+
Sbjct: 106 SYLF--QLLQGLAFCHSHRVLHRDLKPQNLLINTEGA 140
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 81/157 (51%), Gaps = 29/157 (18%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
+G+G +G VY+ ++ TGEV+ LK++ R+D E E G+ +
Sbjct: 18 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETE--------------------GVPST- 55
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP---GQPLPWGQ 604
++++L+ L+H N+++ + V++ + KL LV E++ LK+ + G PLP +
Sbjct: 56 -AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIK 113
Query: 605 RVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS 641
F + G+ + HS ++HRDL QN L+ G+
Sbjct: 114 SYLF--QLLQGLAFCHSHRVLHRDLKPQNLLINTEGA 148
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 81/157 (51%), Gaps = 29/157 (18%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
+G+G +G VY+ ++ TGEV+ LK++ R+D E E G+ +
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETE--------------------GVPST- 51
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP---GQPLPWGQ 604
++++L+ L+H N+++ + V++ + KL LV E++ LK+ + G PLP +
Sbjct: 52 -AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIK 109
Query: 605 RVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS 641
F + G+ + HS ++HRDL QN L+ G+
Sbjct: 110 SYLF--QLLQGLAFCHSHRVLHRDLKPQNLLINTEGA 144
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 81/157 (51%), Gaps = 29/157 (18%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
+G+G +G VY+ ++ TGEV+ LK++ R+D E E G+ +
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETE--------------------GVPST- 50
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP---GQPLPWGQ 604
++++L+ L+H N+++ + V++ + KL LV E++ LK+ + G PLP +
Sbjct: 51 -AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIK 108
Query: 605 RVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS 641
F + G+ + HS ++HRDL QN L+ G+
Sbjct: 109 SYLF--QLLQGLAFCHSHRVLHRDLKPQNLLINTEGA 143
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 81/157 (51%), Gaps = 29/157 (18%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
+G+G +G VY+ ++ TGEV+ LK++ R+D E E G+ +
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETE--------------------GVPST- 51
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP---GQPLPWGQ 604
++++L+ L+H N+++ + V++ + KL LV E++ LK+ + G PLP +
Sbjct: 52 -AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEHV-DQDLKKFMDASALTGIPLPLIK 109
Query: 605 RVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS 641
F + G+ + HS ++HRDL QN L+ G+
Sbjct: 110 SYLF--QLLQGLAFCHSHRVLHRDLKPQNLLINTEGA 144
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 81/157 (51%), Gaps = 29/157 (18%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
+G+G +G VY+ ++ TGEV+ LK++ R+D E E G+ +
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETE--------------------GVPST- 48
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP---GQPLPWGQ 604
++++L+ L+H N+++ + V++ + KL LV E++ LK+ + G PLP +
Sbjct: 49 -AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIK 106
Query: 605 RVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS 641
F + G+ + HS ++HRDL QN L+ G+
Sbjct: 107 SYLF--QLLQGLAFCHSHRVLHRDLKPQNLLINTEGA 141
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 81/157 (51%), Gaps = 29/157 (18%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
+G+G +G VY+ ++ TGEV+ LK++ R+D E E G+ +
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETE--------------------GVPST- 49
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP---GQPLPWGQ 604
++++L+ L+H N+++ + V++ + KL LV E++ LK+ + G PLP +
Sbjct: 50 -AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIK 107
Query: 605 RVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS 641
F + G+ + HS ++HRDL QN L+ G+
Sbjct: 108 SYLF--QLLQGLAFCHSHRVLHRDLKPQNLLINTEGA 142
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 81/157 (51%), Gaps = 29/157 (18%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
+G+G +G VY+ ++ TGEV+ LK++ R+D E E G+ +
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETE--------------------GVPST- 48
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP---GQPLPWGQ 604
++++L+ L+H N+++ + V++ + KL LV E++ LK+ + G PLP +
Sbjct: 49 -AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIK 106
Query: 605 RVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS 641
F + G+ + HS ++HRDL QN L+ G+
Sbjct: 107 SYLF--QLLQGLAFCHSHRVLHRDLKPQNLLINTEGA 141
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 81/157 (51%), Gaps = 29/157 (18%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
+G+G +G VY+ ++ TGEV+ LK++ R+D E E G+ +
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETE--------------------GVPST- 47
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP---GQPLPWGQ 604
++++L+ L+H N+++ + V++ + KL LV E++ LK+ + G PLP +
Sbjct: 48 -AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIK 105
Query: 605 RVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS 641
F + G+ + HS ++HRDL QN L+ G+
Sbjct: 106 SYLF--QLLQGLAFCHSHRVLHRDLKPQNLLINTEGA 140
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 81/157 (51%), Gaps = 29/157 (18%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
+G+G +G VY+ ++ TGEV+ LK++ R+D E E G+ +
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETE--------------------GVPST- 48
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP---GQPLPWGQ 604
++++L+ L+H N+++ + V++ + KL LV E++ LK+ + G PLP +
Sbjct: 49 -AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIK 106
Query: 605 RVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS 641
F + G+ + HS ++HRDL QN L+ G+
Sbjct: 107 SYLF--QLLQGLAFCHSHRVLHRDLKPQNLLINTEGA 141
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 88/198 (44%), Gaps = 43/198 (21%)
Query: 457 CDLSRTRSRSFRVEASKSRIFRASDLVRGPLLGQGFFGQVYR-----VTHRETGEVMVLK 511
C +T S S E + I L+RG LG G FG+VY + + + + +K
Sbjct: 30 CFAGKTSSISDLKEVPRKNI----TLIRG--LGHGAFGEVYEGQVSGMPNDPSPLQVAVK 83
Query: 512 ELYRV-DEEAEKNFLKESKQGLIYLIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGV 570
L V E+ E +FL E+ ++ +H N++R IGV
Sbjct: 84 TLPEVCSEQDELDFLMEA-------------------------LIISKFNHQNIVRCIGV 118
Query: 571 LYKDRKLNLVTEYIAGGTLKELLQD----PGQP--LPWGQRVNFARDIAAGMTYLHSMNL 624
+ ++ E +AGG LK L++ P QP L ++ ARDIA G YL +
Sbjct: 119 SLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHF 178
Query: 625 IHRDLNSQNCLVREVGSG 642
IHRD+ ++NCL+ G G
Sbjct: 179 IHRDIAARNCLLTCPGPG 196
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 81/157 (51%), Gaps = 29/157 (18%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
+G+G +G VY+ ++ TGEV+ LK++ R+D E E G+ +
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETE--------------------GVPST- 49
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP---GQPLPWGQ 604
++++L+ L+H N+++ + V++ + KL LV E++ LK+ + G PLP +
Sbjct: 50 -AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIK 107
Query: 605 RVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS 641
F + G+ + HS ++HRDL QN L+ G+
Sbjct: 108 SYLF--QLLQGLAFCHSHRVLHRDLKPQNLLINTEGA 142
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 81/157 (51%), Gaps = 29/157 (18%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
+G+G +G VY+ ++ TGEV+ LK++ R+D E E G+ +
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETE--------------------GVPST- 47
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP---GQPLPWGQ 604
++++L+ L+H N+++ + V++ + KL LV E++ LK+ + G PLP +
Sbjct: 48 -AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIK 105
Query: 605 RVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS 641
F + G+ + HS ++HRDL QN L+ G+
Sbjct: 106 SYLF--QLLQGLAFCHSHRVLHRDLKPQNLLINTEGA 140
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 81/157 (51%), Gaps = 29/157 (18%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
+G+G +G VY+ ++ TGEV+ LK++ R+D E E G+ +
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETE--------------------GVPST- 50
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP---GQPLPWGQ 604
++++L+ L+H N+++ + V++ + KL LV E++ LK+ + G PLP +
Sbjct: 51 -AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIK 108
Query: 605 RVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS 641
F + G+ + HS ++HRDL QN L+ G+
Sbjct: 109 SYLF--QLLQGLAFCHSHRVLHRDLKPQNLLINTEGA 143
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 81/157 (51%), Gaps = 29/157 (18%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
+G+G +G VY+ ++ TGEV+ LK++ R+D E E G+ +
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETE--------------------GVPST- 48
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP---GQPLPWGQ 604
++++L+ L+H N+++ + V++ + KL LV E++ LK+ + G PLP +
Sbjct: 49 -AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIK 106
Query: 605 RVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS 641
F + G+ + HS ++HRDL QN L+ G+
Sbjct: 107 SYLF--QLLQGLAFCHSHRVLHRDLKPQNLLINTEGA 141
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 81/157 (51%), Gaps = 29/157 (18%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
+G+G +G VY+ ++ TGEV+ LK++ R+D E E G+ +
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETE--------------------GVPST- 48
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP---GQPLPWGQ 604
++++L+ L+H N+++ + V++ + KL LV E++ LK+ + G PLP +
Sbjct: 49 -AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIK 106
Query: 605 RVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS 641
F + G+ + HS ++HRDL QN L+ G+
Sbjct: 107 SYLF--QLLQGLAFCHSHRVLHRDLKPQNLLINTEGA 141
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 81/157 (51%), Gaps = 29/157 (18%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
+G+G +G VY+ ++ TGEV+ LK++ R+D E E G+ +
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETE--------------------GVPST- 52
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP---GQPLPWGQ 604
++++L+ L+H N+++ + V++ + KL LV E++ LK+ + G PLP +
Sbjct: 53 -AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIK 110
Query: 605 RVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS 641
F + G+ + HS ++HRDL QN L+ G+
Sbjct: 111 SYLF--QLLQGLAFCHSHRVLHRDLKPQNLLINTEGA 145
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 88/200 (44%), Gaps = 47/200 (23%)
Query: 457 CDLSRTRSRSFRVEASKSRIFRASDLVRGPLLGQGFFGQVY--RVTHRETGE------VM 508
C +T S S E + I L+RG LG G FG+VY +V+ V
Sbjct: 28 CFAGKTSSISDLKEVPRKNI----TLIRG--LGHGAFGEVYEGQVSGMPNDPSPLQVAVK 81
Query: 509 VLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFI 568
L E+Y E+ E +FL E+ ++ +H N++R I
Sbjct: 82 TLPEVY--SEQDELDFLMEA-------------------------LIISKFNHQNIVRCI 114
Query: 569 GVLYKDRKLNLVTEYIAGGTLKELLQD----PGQP--LPWGQRVNFARDIAAGMTYLHSM 622
GV + ++ E +AGG LK L++ P QP L ++ ARDIA G YL
Sbjct: 115 GVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN 174
Query: 623 NLIHRDLNSQNCLVREVGSG 642
+ IHRD+ ++NCL+ G G
Sbjct: 175 HFIHRDIAARNCLLTCPGPG 194
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 81/157 (51%), Gaps = 29/157 (18%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
+G+G +G VY+ ++ TGEV+ LK++ R+D E E G+ +
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETE--------------------GVPST- 51
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP---GQPLPWGQ 604
++++L+ L+H N+++ + V++ + KL LV E++ LK+ + G PLP +
Sbjct: 52 -AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIK 109
Query: 605 RVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS 641
F + G+ + HS ++HRDL QN L+ G+
Sbjct: 110 SYLF--QLLQGLAFCHSHRVLHRDLKPQNLLINTEGA 144
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 88/198 (44%), Gaps = 43/198 (21%)
Query: 457 CDLSRTRSRSFRVEASKSRIFRASDLVRGPLLGQGFFGQVYR-----VTHRETGEVMVLK 511
C +T S S E + I L+RG LG G FG+VY + + + + +K
Sbjct: 31 CFAGKTSSISDLKEVPRKNI----TLIRG--LGHGAFGEVYEGQVSGMPNDPSPLQVAVK 84
Query: 512 ELYRV-DEEAEKNFLKESKQGLIYLIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGV 570
L V E+ E +FL E+ ++ +H N++R IGV
Sbjct: 85 TLPEVCSEQDELDFLMEA-------------------------LIISKFNHQNIVRCIGV 119
Query: 571 LYKDRKLNLVTEYIAGGTLKELLQD----PGQP--LPWGQRVNFARDIAAGMTYLHSMNL 624
+ ++ E +AGG LK L++ P QP L ++ ARDIA G YL +
Sbjct: 120 SLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHF 179
Query: 625 IHRDLNSQNCLVREVGSG 642
IHRD+ ++NCL+ G G
Sbjct: 180 IHRDIAARNCLLTCPGPG 197
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 88/198 (44%), Gaps = 43/198 (21%)
Query: 457 CDLSRTRSRSFRVEASKSRIFRASDLVRGPLLGQGFFGQVYR-----VTHRETGEVMVLK 511
C +T S S E + I L+RG LG G FG+VY + + + + +K
Sbjct: 54 CFAGKTSSISDLKEVPRKNI----TLIRG--LGHGAFGEVYEGQVSGMPNDPSPLQVAVK 107
Query: 512 ELYRV-DEEAEKNFLKESKQGLIYLIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGV 570
L V E+ E +FL E+ ++ +H N++R IGV
Sbjct: 108 TLPEVCSEQDELDFLMEA-------------------------LIISKFNHQNIVRCIGV 142
Query: 571 LYKDRKLNLVTEYIAGGTLKELLQD----PGQP--LPWGQRVNFARDIAAGMTYLHSMNL 624
+ ++ E +AGG LK L++ P QP L ++ ARDIA G YL +
Sbjct: 143 SLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHF 202
Query: 625 IHRDLNSQNCLVREVGSG 642
IHRD+ ++NCL+ G G
Sbjct: 203 IHRDIAARNCLLTCPGPG 220
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 81/157 (51%), Gaps = 29/157 (18%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
+G+G +G VY+ ++ TGEV+ LK++ R+D E E G+ +
Sbjct: 18 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETE--------------------GVPST- 55
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP---GQPLPWGQ 604
++++L+ L+H N+++ + V++ + KL LV E++ LK+ + G PLP +
Sbjct: 56 -AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIK 113
Query: 605 RVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS 641
F + G+ + HS ++HRDL QN L+ G+
Sbjct: 114 SYLF--QLLQGLAFCHSHRVLHRDLKPQNLLINTEGA 148
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 56/98 (57%), Gaps = 1/98 (1%)
Query: 542 GLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-DPGQPL 600
G ++ + ++++L H ++R V+ K+ + ++TE++A G+L + L+ D G +
Sbjct: 47 GTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKV 106
Query: 601 PWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
+ ++F+ IA GM Y+ N IHRDL + N LV E
Sbjct: 107 LLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSE 144
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 81/157 (51%), Gaps = 29/157 (18%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
+G+G +G VY+ ++ TGEV+ LK++ R+D E E G+ +
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETE--------------------GVPST- 52
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP---GQPLPWGQ 604
++++L+ L+H N+++ + V++ + KL LV E++ LK+ + G PLP +
Sbjct: 53 -AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIK 110
Query: 605 RVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS 641
F + G+ + HS ++HRDL QN L+ G+
Sbjct: 111 SYLF--QLLQGLAFCHSHRVLHRDLKPQNLLINTEGA 145
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 81/157 (51%), Gaps = 29/157 (18%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
+G+G +G VY+ ++ TGEV+ LK++ R+D E E G+ +
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETE--------------------GVPST- 49
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP---GQPLPWGQ 604
++++L+ L+H N+++ + V++ + KL LV E++ LK+ + G PLP +
Sbjct: 50 -AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIK 107
Query: 605 RVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS 641
F + G+ + HS ++HRDL QN L+ G+
Sbjct: 108 SYLF--QLLQGLAFCHSHRVLHRDLKPQNLLINTEGA 142
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%)
Query: 550 FSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFA 609
+ +++ H N+IR GV+ K + + +VTEY+ G+L L+ Q V
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML 153
Query: 610 RDIAAGMTYLHSMNLIHRDLNSQNCLV 636
R IA+GM YL M +HRDL ++N L+
Sbjct: 154 RGIASGMKYLSDMGFVHRDLAARNILI 180
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 79/156 (50%), Gaps = 27/156 (17%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
+G+G +G VY+ ++ TGEV+ LK++ R+D E E G+ +
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETE--------------------GVPST- 51
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGG--TLKELLQDPGQPLPWGQR 605
++++L+ L+H N+++ + V++ + KL LV E++ T + G PLP +
Sbjct: 52 -AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKS 110
Query: 606 VNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS 641
F + G+ + HS ++HRDL QN L+ G+
Sbjct: 111 YLF--QLLQGLAFCHSHRVLHRDLKPQNLLINTEGA 144
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 82/157 (52%), Gaps = 29/157 (18%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
+G+G +G VY+ ++ TGEV+ LK++ R+D E E G+ +
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETE--------------------GVPST- 51
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP---GQPLPWGQ 604
++++L+ L+H N+++ + V++ + KL LV E+++ LK+ + G PLP +
Sbjct: 52 -AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMD-LKKFMDASALTGIPLPLIK 109
Query: 605 RVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS 641
F + G+ + HS ++HRDL +N L+ G+
Sbjct: 110 SYLF--QLLQGLAFCHSHRVLHRDLKPENLLINTEGA 144
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 84/172 (48%), Gaps = 32/172 (18%)
Query: 471 ASKSRIFRASDLVRGPLLGQGFFGQV----YRVTHRETGEVMVLKELYRVDEEAEKNFLK 526
AS +F L + LG+G FG+V Y T+ TGE++ +K L + +
Sbjct: 5 ASDPTVFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKAL-------KADCGP 57
Query: 527 ESKQGLIYLIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYK--DRKLNLVTEYI 584
+ + G ID +LR+L+H ++I++ G ++ L LV EY+
Sbjct: 58 QHRSGWKQEID-----------------ILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYV 100
Query: 585 AGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
G+L++ L P + Q + FA+ I GM YLH+ + IHR+L ++N L+
Sbjct: 101 PLGSLRDYL--PRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRNLAARNVLL 150
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 79/156 (50%), Gaps = 27/156 (17%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
+G+G +G VY+ ++ TGEV+ LK++ R+D E E G+ +
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETE--------------------GVPST- 47
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGG--TLKELLQDPGQPLPWGQR 605
++++L+ L+H N+++ + V++ + KL LV E++ T + G PLP +
Sbjct: 48 -AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKS 106
Query: 606 VNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS 641
F + G+ + HS ++HRDL QN L+ G+
Sbjct: 107 YLF--QLLQGLAFCHSHRVLHRDLKPQNLLINTEGA 140
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 82/157 (52%), Gaps = 29/157 (18%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
+G+G +G VY+ ++ TGEV+ LK++ R+D E E G+ +
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETE--------------------GVPST- 49
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP---GQPLPWGQ 604
++++L+ L+H N+++ + V++ + KL LV E+++ LK+ + G PLP +
Sbjct: 50 -AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMD-LKKFMDASALTGIPLPLIK 107
Query: 605 RVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS 641
F + G+ + HS ++HRDL +N L+ G+
Sbjct: 108 SYLF--QLLQGLAFCHSHRVLHRDLKPENLLINTEGA 142
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 84/185 (45%), Gaps = 44/185 (23%)
Query: 482 LVRGPLLGQGFFGQVYR-----VTHRETGEVMVLKELYRV-DEEAEKNFLKESKQGLIYL 535
L+RG LG G FG+VY + + + + +K L V E+ E +FL E+
Sbjct: 35 LIRG--LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEA------- 85
Query: 536 IDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD 595
++ +H N++R IGV + ++ E +AGG LK L++
Sbjct: 86 ------------------LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRE 127
Query: 596 ----PGQP--LPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGSG-----FD 644
P QP L ++ ARDIA G YL + IHRD+ ++NCL+ G G D
Sbjct: 128 TRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGD 187
Query: 645 FHLGQ 649
F + Q
Sbjct: 188 FGMAQ 192
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%)
Query: 550 FSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFA 609
+ +++ H N+IR GV+ K + + +VTEY+ G+L L+ Q V
Sbjct: 82 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML 141
Query: 610 RDIAAGMTYLHSMNLIHRDLNSQNCLV 636
R IA+GM YL M +HRDL ++N L+
Sbjct: 142 RGIASGMKYLSDMGYVHRDLAARNILI 168
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%)
Query: 550 FSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFA 609
+ +++ H N+IR GV+ K + + +VTEY+ G+L L+ Q V
Sbjct: 65 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML 124
Query: 610 RDIAAGMTYLHSMNLIHRDLNSQNCLV 636
R IA+GM YL M +HRDL ++N L+
Sbjct: 125 RGIASGMKYLSDMGYVHRDLAARNILI 151
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 80/173 (46%), Gaps = 39/173 (22%)
Query: 482 LVRGPLLGQGFFGQVYR-----VTHRETGEVMVLKELYRV-DEEAEKNFLKESKQGLIYL 535
L+RG LG G FG+VY + + + + +K L V E+ E +FL E+
Sbjct: 35 LIRG--LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEA------- 85
Query: 536 IDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD 595
++ +H N++R IGV + ++ E +AGG LK L++
Sbjct: 86 ------------------LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRE 127
Query: 596 ----PGQP--LPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGSG 642
P QP L ++ ARDIA G YL + IHRD+ ++NCL+ G G
Sbjct: 128 TRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPG 180
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 81/157 (51%), Gaps = 29/157 (18%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
+G+G +G VY+ ++ TGEV+ LK++ R+D E E G+ +
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETE--------------------GVPST- 48
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP---GQPLPWGQ 604
++++L+ L+H N+++ + V++ + KL LV E++ LK+ + G PLP +
Sbjct: 49 -AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKDFMDASALTGIPLPLIK 106
Query: 605 RVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS 641
F + G+ + HS ++HRDL +N L+ G+
Sbjct: 107 SYLF--QLLQGLAFCHSHRVLHRDLKPENLLINTEGA 141
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 80/173 (46%), Gaps = 39/173 (22%)
Query: 482 LVRGPLLGQGFFGQVYR-----VTHRETGEVMVLKELYRV-DEEAEKNFLKESKQGLIYL 535
L+RG LG G FG+VY + + + + +K L V E+ E +FL E+
Sbjct: 41 LIRG--LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEA------- 91
Query: 536 IDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD 595
++ +H N++R IGV + ++ E +AGG LK L++
Sbjct: 92 ------------------LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRE 133
Query: 596 ----PGQP--LPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGSG 642
P QP L ++ ARDIA G YL + IHRD+ ++NCL+ G G
Sbjct: 134 TRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPG 186
>pdb|2DJ7|A Chain A, Solution Structure Of 3rd Lim Domain Of Actin-Binding
Lim Protein 3
Length = 80
Score = 63.2 bits (152), Expect = 5e-10, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 35/57 (61%)
Query: 12 CAGCLNNIVEDEYVQALSQEWHTDCFRCSACDVMLDNWYFEKDGLLFCKEDYNGKYG 68
CAGC I + + AL ++WH CF+C C V+L Y KDG+ +C+ DY+ ++G
Sbjct: 18 CAGCKEEIKHGQSLLALDKQWHVSCFKCQTCSVILTGEYISKDGVPYCESDYHAQFG 74
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 47/87 (54%)
Query: 550 FSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFA 609
S+ +++ H NVI GV+ K + ++TE++ G+L L+ Q V
Sbjct: 82 LSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGML 141
Query: 610 RDIAAGMTYLHSMNLIHRDLNSQNCLV 636
R IAAGM YL MN +HRDL ++N LV
Sbjct: 142 RGIAAGMKYLADMNYVHRDLAARNILV 168
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%)
Query: 550 FSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFA 609
+ +++ H N+IR GV+ K + + +VTEY+ G+L L+ Q V
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML 153
Query: 610 RDIAAGMTYLHSMNLIHRDLNSQNCLV 636
R IA+GM YL M +HRDL ++N L+
Sbjct: 154 RGIASGMKYLSDMGYVHRDLAARNILI 180
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%)
Query: 550 FSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFA 609
+ +++ H N+IR GV+ K + + +VTEY+ G+L L+ Q V
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML 153
Query: 610 RDIAAGMTYLHSMNLIHRDLNSQNCLV 636
R IA+GM YL M +HRDL ++N L+
Sbjct: 154 RGIASGMKYLSDMGYVHRDLAARNILI 180
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%)
Query: 550 FSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFA 609
+ +++ H N+IR GV+ K + + +VTEY+ G+L L+ Q V
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML 153
Query: 610 RDIAAGMTYLHSMNLIHRDLNSQNCLV 636
R IA+GM YL M +HRDL ++N L+
Sbjct: 154 RGIASGMKYLSDMGYVHRDLAARNILI 180
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%)
Query: 550 FSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFA 609
+ +++ H N+IR GV+ K + + +VTEY+ G+L L+ Q V
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML 153
Query: 610 RDIAAGMTYLHSMNLIHRDLNSQNCLV 636
R IA+GM YL M +HRDL ++N L+
Sbjct: 154 RGIASGMKYLSDMGYVHRDLAARNILI 180
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%)
Query: 550 FSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFA 609
+ +++ H N+IR GV+ K + + +VTEY+ G+L L+ Q V
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML 153
Query: 610 RDIAAGMTYLHSMNLIHRDLNSQNCLV 636
R IA+GM YL M +HRDL ++N L+
Sbjct: 154 RGIASGMKYLSDMGYVHRDLAARNILI 180
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%)
Query: 550 FSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFA 609
+ +++ H N+IR GV+ K + + +VTEY+ G+L L+ Q V
Sbjct: 92 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML 151
Query: 610 RDIAAGMTYLHSMNLIHRDLNSQNCLV 636
R IA+GM YL M +HRDL ++N L+
Sbjct: 152 RGIASGMKYLSDMGYVHRDLAARNILI 178
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 82/166 (49%), Gaps = 31/166 (18%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LGQG FG+V+ T T V + + + + + FL+E++
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAI--KTLKPGNMSPEAFLQEAQ------------------ 232
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-DPGQPLPWGQRV 606
V++ L H +++ V+ + + +VTEY++ G+L + L+ + G+ L Q V
Sbjct: 233 -------VMKKLRHEKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLV 284
Query: 607 NFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE--VGSGFDFHLGQI 650
+ A IA+GM Y+ MN +HRDL + N LV E V DF LG++
Sbjct: 285 DMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLGRL 330
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 80/173 (46%), Gaps = 39/173 (22%)
Query: 482 LVRGPLLGQGFFGQVYR-----VTHRETGEVMVLKELYRV-DEEAEKNFLKESKQGLIYL 535
L+RG LG G FG+VY + + + + +K L V E+ E +FL E+
Sbjct: 61 LIRG--LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEA------- 111
Query: 536 IDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD 595
++ +H N++R IGV + ++ E +AGG LK L++
Sbjct: 112 ------------------LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRE 153
Query: 596 ----PGQP--LPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGSG 642
P QP L ++ ARDIA G YL + IHRD+ ++NCL+ G G
Sbjct: 154 TRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPG 206
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 81/157 (51%), Gaps = 29/157 (18%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
+G+G +G VY+ ++ TGEV+ LK++ R+D E E G+ +
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETE--------------------GVPST- 50
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP---GQPLPWGQ 604
++++L+ L+H N+++ + V++ + KL LV E++ LK+ + G PLP +
Sbjct: 51 -AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIK 108
Query: 605 RVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS 641
F + G+ + HS ++HRDL +N L+ G+
Sbjct: 109 SYLF--QLLQGLAFCHSHRVLHRDLKPENLLINTEGA 143
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 81/157 (51%), Gaps = 29/157 (18%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
+G+G +G VY+ ++ TGEV+ LK++ R+D E E G+ +
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETE--------------------GVPST- 49
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP---GQPLPWGQ 604
++++L+ L+H N+++ + V++ + KL LV E++ LK+ + G PLP +
Sbjct: 50 -AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIK 107
Query: 605 RVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS 641
F + G+ + HS ++HRDL +N L+ G+
Sbjct: 108 SYLF--QLLQGLAFCHSHRVLHRDLKPENLLINTEGA 142
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 70/147 (47%), Gaps = 3/147 (2%)
Query: 536 IDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD 595
I + G ++ + V+ +L H +++ GV K R + ++TEY+A G L L++
Sbjct: 37 IKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE 96
Query: 596 PGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG--SGFDFHLGQIYLI 653
Q + +D+ M YL S +HRDL ++NCLV + G DF L + Y++
Sbjct: 97 MRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSR-YVL 155
Query: 654 YVPYTLFILSAKTKKTYYPNILKKASF 680
YT + S + P +L + F
Sbjct: 156 DDEYTSSVGSKFPVRWSPPEVLMYSKF 182
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 70/147 (47%), Gaps = 3/147 (2%)
Query: 536 IDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD 595
I + G ++ + V+ +L H +++ GV K R + ++TEY+A G L L++
Sbjct: 33 IKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE 92
Query: 596 PGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG--SGFDFHLGQIYLI 653
Q + +D+ M YL S +HRDL ++NCLV + G DF L + Y++
Sbjct: 93 MRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSR-YVL 151
Query: 654 YVPYTLFILSAKTKKTYYPNILKKASF 680
YT + S + P +L + F
Sbjct: 152 DDEYTSSVGSKFPVRWSPPEVLMYSKF 178
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 81/166 (48%), Gaps = 31/166 (18%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LGQG FG+V+ T T V + + + + + FL+E++
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAI--KTLKPGTMSPEAFLQEAQ------------------ 55
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-DPGQPLPWGQRV 606
V++ L H +++ V+ + + +VTEY++ G+L + L+ + G+ L Q V
Sbjct: 56 -------VMKKLRHEKLVQLYAVV-SEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLV 107
Query: 607 NFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE--VGSGFDFHLGQI 650
+ A IA+GM Y+ MN +HRDL + N LV E V DF L ++
Sbjct: 108 DMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL 153
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 81/166 (48%), Gaps = 31/166 (18%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LGQG FG+V+ T T V + + + + + FL+E++
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAI--KTLKPGTMSPEAFLQEAQ------------------ 58
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-DPGQPLPWGQRV 606
V++ L H +++ V+ + + +VTEY++ G+L + L+ + G+ L Q V
Sbjct: 59 -------VMKKLRHEKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLV 110
Query: 607 NFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE--VGSGFDFHLGQI 650
+ A IA+GM Y+ MN +HRDL + N LV E V DF L ++
Sbjct: 111 DMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL 156
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 70/147 (47%), Gaps = 3/147 (2%)
Query: 536 IDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD 595
I + G ++ + V+ +L H +++ GV K R + ++TEY+A G L L++
Sbjct: 53 IKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE 112
Query: 596 PGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG--SGFDFHLGQIYLI 653
Q + +D+ M YL S +HRDL ++NCLV + G DF L + Y++
Sbjct: 113 MRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSR-YVL 171
Query: 654 YVPYTLFILSAKTKKTYYPNILKKASF 680
YT + S + P +L + F
Sbjct: 172 DDEYTSSVGSKFPVRWSPPEVLMYSKF 198
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 84/194 (43%), Gaps = 42/194 (21%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LG G FG+VY+ ++ETG + K + EE ++++ E
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVE-------------------- 58
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
+ +L + H +++ +G Y D KL ++ E+ GG + ++ + + L Q
Sbjct: 59 -----IEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQV 113
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGSGFDFHLGQIYLIYVPYTLFILSAKTK 667
R + + +LHS +IHRDL + N L+ G D L F +SAK
Sbjct: 114 VCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEG---DIRLAD----------FGVSAKNL 160
Query: 668 KTYYPNILKKASFI 681
KT + K+ SFI
Sbjct: 161 KT----LQKRDSFI 170
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 70/147 (47%), Gaps = 3/147 (2%)
Query: 536 IDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD 595
I + G ++ + V+ +L H +++ GV K R + ++TEY+A G L L++
Sbjct: 44 IKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE 103
Query: 596 PGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG--SGFDFHLGQIYLI 653
Q + +D+ M YL S +HRDL ++NCLV + G DF L + Y++
Sbjct: 104 MRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSR-YVL 162
Query: 654 YVPYTLFILSAKTKKTYYPNILKKASF 680
YT + S + P +L + F
Sbjct: 163 DDEYTSSVGSKFPVRWSPPEVLMYSKF 189
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 70/147 (47%), Gaps = 3/147 (2%)
Query: 536 IDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD 595
I + G ++ + V+ +L H +++ GV K R + ++TEY+A G L L++
Sbjct: 38 IKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE 97
Query: 596 PGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG--SGFDFHLGQIYLI 653
Q + +D+ M YL S +HRDL ++NCLV + G DF L + Y++
Sbjct: 98 MRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSR-YVL 156
Query: 654 YVPYTLFILSAKTKKTYYPNILKKASF 680
YT + S + P +L + F
Sbjct: 157 DDEYTSSVGSKFPVRWSPPEVLMYSKF 183
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 84/194 (43%), Gaps = 42/194 (21%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LG G FG+VY+ ++ETG + K + EE ++++ E
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVE-------------------- 66
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
+ +L + H +++ +G Y D KL ++ E+ GG + ++ + + L Q
Sbjct: 67 -----IEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQV 121
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGSGFDFHLGQIYLIYVPYTLFILSAKTK 667
R + + +LHS +IHRDL + N L+ G D L F +SAK
Sbjct: 122 VCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEG---DIRLAD----------FGVSAKNL 168
Query: 668 KTYYPNILKKASFI 681
KT + K+ SFI
Sbjct: 169 KT----LQKRDSFI 178
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 80/157 (50%), Gaps = 29/157 (18%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
+G+G +G VY+ ++ TGEV+ L ++ R+D E E G+ +
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALXKI-RLDTETE--------------------GVPST- 48
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP---GQPLPWGQ 604
++++L+ L+H N+++ + V++ + KL LV E++ LK+ + G PLP +
Sbjct: 49 -AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIK 106
Query: 605 RVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS 641
F + G+ + HS ++HRDL QN L+ G+
Sbjct: 107 SYLF--QLLQGLAFCHSHRVLHRDLKPQNLLINTEGA 141
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 80/157 (50%), Gaps = 29/157 (18%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
+G+G +G VY+ ++ TGEV+ L ++ R+D E E G+ +
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALXKI-RLDTETE--------------------GVPST- 47
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP---GQPLPWGQ 604
++++L+ L+H N+++ + V++ + KL LV E++ LK+ + G PLP +
Sbjct: 48 -AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIK 105
Query: 605 RVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS 641
F + G+ + HS ++HRDL QN L+ G+
Sbjct: 106 SYLF--QLLQGLAFCHSHRVLHRDLKPQNLLINTEGA 140
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 69/153 (45%), Gaps = 26/153 (16%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
+G+G FG+V++ T +V+ +K +IDL
Sbjct: 35 IGKGSFGEVFKGIDNRTQKVVAIK-----------------------IIDLEEAEDEIED 71
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
++ VL V ++ G KD KL ++ EY+ GG+ +LL+ PG PL Q
Sbjct: 72 IQ-QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLE-PG-PLDETQIAT 128
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
R+I G+ YLHS IHRD+ + N L+ E G
Sbjct: 129 ILREILKGLDYLHSEKKIHRDIKAANVLLSEHG 161
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 69/153 (45%), Gaps = 26/153 (16%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
+G+G FG+V++ T +V+ +K +IDL
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIK-----------------------IIDLEEAEDEIED 51
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
++ VL V ++ G KD KL ++ EY+ GG+ +LL+ PG PL Q
Sbjct: 52 IQ-QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLE-PG-PLDETQIAT 108
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
R+I G+ YLHS IHRD+ + N L+ E G
Sbjct: 109 ILREILKGLDYLHSEKKIHRDIKAANVLLSEHG 141
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 53/105 (50%)
Query: 536 IDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD 595
I + G ++ + V+ +L H +++ GV K R + ++TEY+A G L L++
Sbjct: 38 IKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE 97
Query: 596 PGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
Q + +D+ M YL S +HRDL ++NCLV + G
Sbjct: 98 MRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQG 142
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 60/102 (58%), Gaps = 4/102 (3%)
Query: 550 FSQVAVLRSLHHHNVIRFIGVLYKDRK-LNLVTEYIAGGTLKELLQDPGQPLPWGQ-RVN 607
++ +V+ L H N+++ +GV+ +++ L +VTEY+A G+L + L+ G+ + G +
Sbjct: 47 LAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLK 106
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLVRE--VGSGFDFHL 647
F+ D+ M YL N +HRDL ++N LV E V DF L
Sbjct: 107 FSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGL 148
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 69/153 (45%), Gaps = 26/153 (16%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
+G+G FG+V++ T +V+ +K +IDL
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIK-----------------------IIDLEEAEDEIED 51
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
++ VL V ++ G KD KL ++ EY+ GG+ +LL+ PG PL Q
Sbjct: 52 IQ-QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLE-PG-PLDETQIAT 108
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
R+I G+ YLHS IHRD+ + N L+ E G
Sbjct: 109 ILREILKGLDYLHSEKKIHRDIKAANVLLSEHG 141
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 60/102 (58%), Gaps = 4/102 (3%)
Query: 550 FSQVAVLRSLHHHNVIRFIGVLYKDRK-LNLVTEYIAGGTLKELLQDPGQPLPWGQ-RVN 607
++ +V+ L H N+++ +GV+ +++ L +VTEY+A G+L + L+ G+ + G +
Sbjct: 234 LAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLK 293
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLVRE--VGSGFDFHL 647
F+ D+ M YL N +HRDL ++N LV E V DF L
Sbjct: 294 FSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGL 335
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 69/153 (45%), Gaps = 26/153 (16%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
+G+G FG+V++ T +V+ +K +IDL
Sbjct: 30 IGKGSFGEVFKGIDNRTQKVVAIK-----------------------IIDLEEAEDEIED 66
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
++ VL V ++ G KD KL ++ EY+ GG+ +LL+ PG PL Q
Sbjct: 67 IQ-QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLE-PG-PLDETQIAT 123
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
R+I G+ YLHS IHRD+ + N L+ E G
Sbjct: 124 ILREILKGLDYLHSEKKIHRDIKAANVLLSEHG 156
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 53/105 (50%)
Query: 536 IDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD 595
I + G ++ + V+ +L H +++ GV K R + ++TEY+A G L L++
Sbjct: 53 IKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE 112
Query: 596 PGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
Q + +D+ M YL S +HRDL ++NCLV + G
Sbjct: 113 MRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQG 157
>pdb|2XJY|A Chain A, Crystal Structure Of The Lmo2:ldb1-Lid Complex, P21
Crystal Form
pdb|2XJZ|A Chain A, Crystal Structure Of The Lmo2:ldb1-Lid Complex, C2 Crystal
Form
pdb|2XJZ|B Chain B, Crystal Structure Of The Lmo2:ldb1-Lid Complex, C2 Crystal
Form
pdb|2XJZ|C Chain C, Crystal Structure Of The Lmo2:ldb1-Lid Complex, C2 Crystal
Form
pdb|2XJZ|D Chain D, Crystal Structure Of The Lmo2:ldb1-Lid Complex, C2 Crystal
Form
pdb|2XJZ|E Chain E, Crystal Structure Of The Lmo2:ldb1-Lid Complex, C2 Crystal
Form
Length = 131
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 56/117 (47%), Gaps = 7/117 (5%)
Query: 9 ILTCAGCLNNIVEDEYVQALSQEWHTDCFRCSACDVMLDN---WYFEKDGLLFCKEDYNG 65
+LTC GC NI + +++A+ Q WH DC C C L + K G C+ DY
Sbjct: 2 LLTCGGCQQNIGDRYFLKAIDQYWHEDCLSCDLCGCRLGEVGRRLYYKLGRKLCRRDYLR 61
Query: 66 KYGEA--CQNCGQMMSG--PVMVVGDHKFHPECFKCTSCSCCIGDGESYALVERSIL 118
+G+ C +C + + M V D +H ECFKC +C G+ Y L+ I+
Sbjct: 62 LFGQDGLCASCDKRIRAYEMTMRVKDKVYHLECFKCAACQKHFCVGDRYLLINSDIV 118
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 60/102 (58%), Gaps = 4/102 (3%)
Query: 550 FSQVAVLRSLHHHNVIRFIGVLYKDRK-LNLVTEYIAGGTLKELLQDPGQPLPWGQ-RVN 607
++ +V+ L H N+++ +GV+ +++ L +VTEY+A G+L + L+ G+ + G +
Sbjct: 62 LAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLK 121
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLVRE--VGSGFDFHL 647
F+ D+ M YL N +HRDL ++N LV E V DF L
Sbjct: 122 FSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGL 163
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 75/152 (49%), Gaps = 29/152 (19%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LGQG FG+V+ T T V + + + + + FL+E++
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAI--KTLKPGTMSPEAFLQEAQ------------------ 231
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-DPGQPLPWGQRV 606
V++ L H +++ V+ + + +VTEY++ G+L + L+ + G+ L Q V
Sbjct: 232 -------VMKKLRHEKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLV 283
Query: 607 NFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
+ A IA+GM Y+ MN +HRDL + N LV E
Sbjct: 284 DMAAQIASGMAYVERMNYVHRDLRAANILVGE 315
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 81/166 (48%), Gaps = 31/166 (18%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LGQG FG+V+ T T V + + + + + FL+E++
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAI--KTLKPGTMSPEAFLQEAQ------------------ 54
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-DPGQPLPWGQRV 606
V++ L H +++ V+ + + +VTEY++ G+L + L+ + G+ L Q V
Sbjct: 55 -------VMKKLRHEKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLV 106
Query: 607 NFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE--VGSGFDFHLGQI 650
+ A IA+GM Y+ MN +HRDL + N LV E V DF L ++
Sbjct: 107 DMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL 152
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 75/152 (49%), Gaps = 29/152 (19%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LGQG FG+V+ T T V + + + + + FL+E++
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAI--KTLKPGTMSPEAFLQEAQ------------------ 231
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-DPGQPLPWGQRV 606
V++ L H +++ V+ + + +VTEY++ G+L + L+ + G+ L Q V
Sbjct: 232 -------VMKKLRHEKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLV 283
Query: 607 NFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
+ A IA+GM Y+ MN +HRDL + N LV E
Sbjct: 284 DMAAQIASGMAYVERMNYVHRDLRAANILVGE 315
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 60/102 (58%), Gaps = 4/102 (3%)
Query: 550 FSQVAVLRSLHHHNVIRFIGVLYKDRK-LNLVTEYIAGGTLKELLQDPGQPLPWGQ-RVN 607
++ +V+ L H N+++ +GV+ +++ L +VTEY+A G+L + L+ G+ + G +
Sbjct: 53 LAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLK 112
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLVRE--VGSGFDFHL 647
F+ D+ M YL N +HRDL ++N LV E V DF L
Sbjct: 113 FSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGL 154
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 74/159 (46%), Gaps = 32/159 (20%)
Query: 487 LLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINN 546
L+G G +GQVY+ H +TG++ +K + +E E E KQ IN
Sbjct: 31 LVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEE-----EIKQE------------INM 73
Query: 547 LHCFSQVAVLRSLHHHNVIRFIGVLYK------DRKLNLVTEYIAGGTLKELLQD-PGQP 599
L +S HH N+ + G K D +L LV E+ G++ +L+++ G
Sbjct: 74 LKKYS--------HHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNT 125
Query: 600 LPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
L R+I G+++LH +IHRD+ QN L+ E
Sbjct: 126 LKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTE 164
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 81/166 (48%), Gaps = 31/166 (18%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LGQG FG+V+ T T V + + + + + FL+E++
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAI--KTLKPGTMSPEAFLQEAQ------------------ 56
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-DPGQPLPWGQRV 606
V++ L H +++ V+ + + +VTEY++ G+L + L+ + G+ L Q V
Sbjct: 57 -------VMKKLRHEKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLV 108
Query: 607 NFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE--VGSGFDFHLGQI 650
+ A IA+GM Y+ MN +HRDL + N LV E V DF L ++
Sbjct: 109 DMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL 154
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 75/152 (49%), Gaps = 29/152 (19%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LGQG FG+V+ T T V + + + + + FL+E++
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAI--KTLKPGTMSPEAFLQEAQ------------------ 314
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-DPGQPLPWGQRV 606
V++ L H +++ V+ + + +VTEY++ G+L + L+ + G+ L Q V
Sbjct: 315 -------VMKKLRHEKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLV 366
Query: 607 NFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
+ A IA+GM Y+ MN +HRDL + N LV E
Sbjct: 367 DMAAQIASGMAYVERMNYVHRDLRAANILVGE 398
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 81/166 (48%), Gaps = 31/166 (18%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LGQG FG+V+ T T V + + + + + FL+E++
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAI--KTLKPGTMSPEAFLQEAQ------------------ 65
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-DPGQPLPWGQRV 606
V++ L H +++ V+ + + +VTEY++ G+L + L+ + G+ L Q V
Sbjct: 66 -------VMKKLRHEKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLV 117
Query: 607 NFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE--VGSGFDFHLGQI 650
+ A IA+GM Y+ MN +HRDL + N LV E V DF L ++
Sbjct: 118 DMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL 163
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 77/153 (50%), Gaps = 35/153 (22%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LG G FG+V+ T+ + +V V K K G + ++
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAV----------------KTMKPGSM------------SV 54
Query: 548 HCF-SQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-DPG--QPLPWG 603
F ++ V+++L H +++ V+ K+ + ++TE++A G+L + L+ D G QPLP
Sbjct: 55 EAFLAEANVMKTLQHDKLVKLHAVVTKE-PIYIITEFMAKGSLLDFLKSDEGSKQPLP-- 111
Query: 604 QRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
+ ++F+ IA GM ++ N IHRDL + N LV
Sbjct: 112 KLIDFSAQIAEGMAFIEQRNYIHRDLRAANILV 144
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 75/155 (48%), Gaps = 32/155 (20%)
Query: 488 LGQGFFGQV----YRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGL 543
LG+G FG+V Y T+ TGE++ +K L ++ K+
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQ---------------- 82
Query: 544 INNLHCFSQVAVLRSLHHHNVIRFIGVLYKD--RKLNLVTEYIAGGTLKELLQDPGQPLP 601
++ +LR+L+H ++I++ G L LV EY+ G+L++ L P +
Sbjct: 83 --------EIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYL--PRHSIG 132
Query: 602 WGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
Q + FA+ I GM YLH+ + IHRDL ++N L+
Sbjct: 133 LAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLL 167
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 75/152 (49%), Gaps = 29/152 (19%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LGQG FG+V+ T T V + + + + + FL+E++
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAI--KTLKPGTMSPEAFLQEAQ------------------ 65
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-DPGQPLPWGQRV 606
V++ L H +++ V+ + + +VTEY++ G+L + L+ + G+ L Q V
Sbjct: 66 -------VMKKLRHEKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLV 117
Query: 607 NFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
+ A IA+GM Y+ MN +HRDL + N LV E
Sbjct: 118 DMAAQIASGMAYVERMNYVHRDLAAANILVGE 149
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%)
Query: 550 FSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFA 609
+ +++ H N+I GV+ K + + +VTEY+ G+L L+ Q V
Sbjct: 71 LGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGML 130
Query: 610 RDIAAGMTYLHSMNLIHRDLNSQNCLV 636
R I+AGM YL M +HRDL ++N L+
Sbjct: 131 RGISAGMKYLSDMGYVHRDLAARNILI 157
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 76/165 (46%), Gaps = 37/165 (22%)
Query: 480 SDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLG 539
+D+ LG G +G+VY ++ + +K L E E+ FLKE+
Sbjct: 18 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEA----------- 65
Query: 540 SHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQP 599
AV++ + H N+++ +GV ++ ++TE++ G L + L++ +
Sbjct: 66 --------------AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR- 110
Query: 600 LPWGQRVN------FARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
Q VN A I++ M YL N IHRDL ++NCLV E
Sbjct: 111 ----QEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE 151
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 76/165 (46%), Gaps = 37/165 (22%)
Query: 480 SDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLG 539
+D+ LG G +G+VY ++ + +K L E E+ FLKE+
Sbjct: 18 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEA----------- 65
Query: 540 SHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQP 599
AV++ + H N+++ +GV ++ ++TE++ G L + L++ +
Sbjct: 66 --------------AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR- 110
Query: 600 LPWGQRVN------FARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
Q VN A I++ M YL N IHRDL ++NCLV E
Sbjct: 111 ----QEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE 151
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%)
Query: 550 FSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFA 609
S+ +++ H N+IR GV+ + R +VTEY+ G+L L+ Q V
Sbjct: 98 LSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGML 157
Query: 610 RDIAAGMTYLHSMNLIHRDLNSQNCLV 636
R + AGM YL + +HRDL ++N LV
Sbjct: 158 RGVGAGMRYLSDLGYVHRDLAARNVLV 184
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%)
Query: 550 FSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFA 609
S+ +++ H N+IR GV+ + R +VTEY+ G+L L+ Q V
Sbjct: 98 LSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGML 157
Query: 610 RDIAAGMTYLHSMNLIHRDLNSQNCLV 636
R + AGM YL + +HRDL ++N LV
Sbjct: 158 RGVGAGMRYLSDLGYVHRDLAARNVLV 184
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 61/115 (53%), Gaps = 10/115 (8%)
Query: 542 GLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD-PGQPL 600
G ++ + +++ L H +++ V+ + + +VTEY+ G+L + L+D G+ L
Sbjct: 44 GTMSPESFLEEAQIMKKLKHDKLVQLYAVV-SEEPIYIVTEYMNKGSLLDFLKDGEGRAL 102
Query: 601 PWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGSGF-----DFHLGQI 650
V+ A +AAGM Y+ MN IHRDL S N L VG+G DF L ++
Sbjct: 103 KLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANIL---VGNGLICKIADFGLARL 154
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 76/165 (46%), Gaps = 37/165 (22%)
Query: 480 SDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLG 539
+D+ LG G +G+VY ++ + +K L E E+ FLKE+
Sbjct: 14 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEA----------- 61
Query: 540 SHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQP 599
AV++ + H N+++ +GV ++ ++TE++ G L + L++ +
Sbjct: 62 --------------AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR- 106
Query: 600 LPWGQRVN------FARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
Q VN A I++ M YL N IHRDL ++NCLV E
Sbjct: 107 ----QEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE 147
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 76/165 (46%), Gaps = 37/165 (22%)
Query: 480 SDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLG 539
+D+ LG G +G+VY ++ + +K L E E+ FLKE+
Sbjct: 17 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEA----------- 64
Query: 540 SHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQP 599
AV++ + H N+++ +GV ++ ++TE++ G L + L++ +
Sbjct: 65 --------------AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR- 109
Query: 600 LPWGQRVN------FARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
Q VN A I++ M YL N IHRDL ++NCLV E
Sbjct: 110 ----QEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE 150
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 67/154 (43%), Gaps = 26/154 (16%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
+G+G FG+VY+ T EV+ +K +IDL
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIK-----------------------IIDLEEAEDEIED 63
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
++ VL + R+ G K KL ++ EY+ GG+ +LL+ PG PL
Sbjct: 64 IQ-QEITVLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLLK-PG-PLEETYIAT 120
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS 641
R+I G+ YLHS IHRD+ + N L+ E G
Sbjct: 121 ILREILKGLDYLHSERKIHRDIKAANVLLSEQGD 154
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 76/165 (46%), Gaps = 37/165 (22%)
Query: 480 SDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLG 539
+D+ LG G +G+VY ++ + +K L E E+ FLKE+
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEA----------- 60
Query: 540 SHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQP 599
AV++ + H N+++ +GV ++ ++TE++ G L + L++ +
Sbjct: 61 --------------AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR- 105
Query: 600 LPWGQRVN------FARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
Q VN A I++ M YL N IHRDL ++NCLV E
Sbjct: 106 ----QEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE 146
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 76/165 (46%), Gaps = 37/165 (22%)
Query: 480 SDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLG 539
+D+ LG G +G+VY ++ + +K L E E+ FLKE+
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEA----------- 60
Query: 540 SHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQP 599
AV++ + H N+++ +GV ++ ++TE++ G L + L++ +
Sbjct: 61 --------------AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR- 105
Query: 600 LPWGQRVN------FARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
Q VN A I++ M YL N IHRDL ++NCLV E
Sbjct: 106 ----QEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE 146
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 76/165 (46%), Gaps = 37/165 (22%)
Query: 480 SDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLG 539
+D+ LG G +G+VY ++ + +K L E E+ FLKE+
Sbjct: 15 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEA----------- 62
Query: 540 SHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQP 599
AV++ + H N+++ +GV ++ ++TE++ G L + L++ +
Sbjct: 63 --------------AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR- 107
Query: 600 LPWGQRVN------FARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
Q VN A I++ M YL N IHRDL ++NCLV E
Sbjct: 108 ----QEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE 148
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 76/165 (46%), Gaps = 37/165 (22%)
Query: 480 SDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLG 539
+D+ LG G +G+VY ++ + +K L E E+ FLKE+
Sbjct: 18 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEA----------- 65
Query: 540 SHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQP 599
AV++ + H N+++ +GV ++ ++TE++ G L + L++ +
Sbjct: 66 --------------AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR- 110
Query: 600 LPWGQRVN------FARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
Q VN A I++ M YL N IHRDL ++NCLV E
Sbjct: 111 ----QEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE 151
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 85/198 (42%), Gaps = 46/198 (23%)
Query: 466 SFRVEASKSRIFRASDLVRGPLLGQGFFGQVYRVT--HRETGEVMVLKELYRVDEEAEKN 523
+F++ F +LV G LG+G FG+V + T H + + + E A +
Sbjct: 9 AFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPS 68
Query: 524 FLKESKQGLIYLIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEY 583
L++ S+ VL+ ++H +VI+ G +D L L+ EY
Sbjct: 69 ELRD---------------------LLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEY 107
Query: 584 IAGGTLKELLQD-----PG------------------QPLPWGQRVNFARDIAAGMTYLH 620
G+L+ L++ PG + L G ++FA I+ GM YL
Sbjct: 108 AKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLA 167
Query: 621 SMNLIHRDLNSQNCLVRE 638
M+L+HRDL ++N LV E
Sbjct: 168 EMSLVHRDLAARNILVAE 185
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 76/165 (46%), Gaps = 37/165 (22%)
Query: 480 SDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLG 539
+D+ LG G +G+VY ++ + +K L E E+ FLKE+
Sbjct: 15 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEA----------- 62
Query: 540 SHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQP 599
AV++ + H N+++ +GV ++ ++TE++ G L + L++ +
Sbjct: 63 --------------AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR- 107
Query: 600 LPWGQRVN------FARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
Q VN A I++ M YL N IHRDL ++NCLV E
Sbjct: 108 ----QEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE 148
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 76/165 (46%), Gaps = 37/165 (22%)
Query: 480 SDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLG 539
+D+ LG G +G+VY ++ + +K L E E+ FLKE+
Sbjct: 26 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEA----------- 73
Query: 540 SHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQP 599
AV++ + H N+++ +GV ++ ++TE++ G L + L++ +
Sbjct: 74 --------------AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR- 118
Query: 600 LPWGQRVN------FARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
Q VN A I++ M YL N IHRDL ++NCLV E
Sbjct: 119 ----QEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE 159
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 84/198 (42%), Gaps = 46/198 (23%)
Query: 466 SFRVEASKSRIFRASDLVRGPLLGQGFFGQVYRVT--HRETGEVMVLKELYRVDEEAEKN 523
+F++ F +LV G LG+G FG+V + T H + + + E A +
Sbjct: 9 AFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPS 68
Query: 524 FLKESKQGLIYLIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEY 583
L++ S+ VL+ ++H +VI+ G +D L L+ EY
Sbjct: 69 ELRD---------------------LLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEY 107
Query: 584 IAGGTLKELLQD-----PG------------------QPLPWGQRVNFARDIAAGMTYLH 620
G+L+ L++ PG + L G ++FA I+ GM YL
Sbjct: 108 AKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLA 167
Query: 621 SMNLIHRDLNSQNCLVRE 638
M L+HRDL ++N LV E
Sbjct: 168 EMKLVHRDLAARNILVAE 185
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%)
Query: 550 FSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFA 609
+ +++ H N+IR GV+ K + + +VTE + G+L L+ Q V
Sbjct: 65 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGML 124
Query: 610 RDIAAGMTYLHSMNLIHRDLNSQNCLV 636
R IA+GM YL M +HRDL ++N L+
Sbjct: 125 RGIASGMKYLSDMGYVHRDLAARNILI 151
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 74/151 (49%), Gaps = 31/151 (20%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LG G FG+V+ T+ + +V V K K G + ++
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAV----------------KTMKPGSM------------SV 227
Query: 548 HCF-SQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-DPGQPLPWGQR 605
F ++ V+++L H +++ V+ K+ + ++TE++A G+L + L+ D G P +
Sbjct: 228 EAFLAEANVMKTLQHDKLVKLHAVVTKE-PIYIITEFMAKGSLLDFLKSDEGSKQPLPKL 286
Query: 606 VNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
++F+ IA GM ++ N IHRDL + N LV
Sbjct: 287 IDFSAQIAEGMAFIEQRNYIHRDLRAANILV 317
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 76/165 (46%), Gaps = 37/165 (22%)
Query: 480 SDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLG 539
+D+ LG G +G+VY ++ + +K L E E+ FLKE+
Sbjct: 15 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEA----------- 62
Query: 540 SHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQP 599
AV++ + H N+++ +GV ++ ++TE++ G L + L++ +
Sbjct: 63 --------------AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR- 107
Query: 600 LPWGQRVN------FARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
Q VN A I++ M YL N IHRDL ++NCLV E
Sbjct: 108 ----QEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE 148
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 81/166 (48%), Gaps = 31/166 (18%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LGQG FG+V+ T T V + + + + + FL+E++
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAI--KTLKPGTMSPEAFLQEAQ------------------ 65
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-DPGQPLPWGQRV 606
V++ + H +++ V+ + + +VTEY++ G+L + L+ + G+ L Q V
Sbjct: 66 -------VMKKIRHEKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLV 117
Query: 607 NFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE--VGSGFDFHLGQI 650
+ A IA+GM Y+ MN +HRDL + N LV E V DF L ++
Sbjct: 118 DMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL 163
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 84/198 (42%), Gaps = 46/198 (23%)
Query: 466 SFRVEASKSRIFRASDLVRGPLLGQGFFGQVYRVT--HRETGEVMVLKELYRVDEEAEKN 523
+F++ F +LV G LG+G FG+V + T H + + + E A +
Sbjct: 9 AFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPS 68
Query: 524 FLKESKQGLIYLIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEY 583
L++ S+ VL+ ++H +VI+ G +D L L+ EY
Sbjct: 69 ELRD---------------------LLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEY 107
Query: 584 IAGGTLKELLQD-----PG------------------QPLPWGQRVNFARDIAAGMTYLH 620
G+L+ L++ PG + L G ++FA I+ GM YL
Sbjct: 108 AKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLA 167
Query: 621 SMNLIHRDLNSQNCLVRE 638
M L+HRDL ++N LV E
Sbjct: 168 EMKLVHRDLAARNILVAE 185
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 74/151 (49%), Gaps = 31/151 (20%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LG G FG+V+ T+ + +V V K K G + ++
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAV----------------KTMKPGSM------------SV 221
Query: 548 HCF-SQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-DPGQPLPWGQR 605
F ++ V+++L H +++ V+ K+ + ++TE++A G+L + L+ D G P +
Sbjct: 222 EAFLAEANVMKTLQHDKLVKLHAVVTKE-PIYIITEFMAKGSLLDFLKSDEGSKQPLPKL 280
Query: 606 VNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
++F+ IA GM ++ N IHRDL + N LV
Sbjct: 281 IDFSAQIAEGMAFIEQRNYIHRDLRAANILV 311
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 559 LHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTY 618
L H N++ I V +D LV EYI G TL E ++ G PL +NF I G+ +
Sbjct: 68 LSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHG-PLSVDTAINFTNQILDGIKH 126
Query: 619 LHSMNLIHRDLNSQNCLV--REVGSGFDFHLGQ 649
H M ++HRD+ QN L+ + FDF + +
Sbjct: 127 AHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAK 159
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 46/87 (52%)
Query: 550 FSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFA 609
S+ +++ H NVI GV+ K + ++TE++ G+L L+ Q V
Sbjct: 56 LSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGML 115
Query: 610 RDIAAGMTYLHSMNLIHRDLNSQNCLV 636
R IAAGM YL MN +HR L ++N LV
Sbjct: 116 RGIAAGMKYLADMNYVHRALAARNILV 142
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 75/160 (46%), Gaps = 27/160 (16%)
Query: 480 SDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLG 539
+D+ LG G FG+VY ++ + +K L E E+ FLKE+
Sbjct: 11 TDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEA----------- 58
Query: 540 SHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD-PGQ 598
AV++ + H N+++ +GV ++ ++TE++ G L + L++ Q
Sbjct: 59 --------------AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ 104
Query: 599 PLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
+ + A I++ M YL N IHRDL ++NCLV E
Sbjct: 105 EVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE 144
>pdb|2DFY|X Chain X, Crystal Structure Of A Cyclized Protein Fusion Of Lmo4 Lim
Domains 1 And 2 With The Lim Interacting Domain Of Ldb1
pdb|2DFY|C Chain C, Crystal Structure Of A Cyclized Protein Fusion Of Lmo4 Lim
Domains 1 And 2 With The Lim Interacting Domain Of Ldb1
Length = 195
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 59/116 (50%), Gaps = 8/116 (6%)
Query: 12 CAGCLNNIVEDEYVQALSQEWHTDCFRCSACDVMLDN---WYFEKDGLLFCKEDYNGKYG 68
CAGC I + + A+ WH+ C +CS+C L + + K G++ C+ DY +G
Sbjct: 6 CAGCGGKIADRFLLYAMDSYWHSRCLKCSSCQAQLGDIGTSSYTKSGMILCRNDYIRLFG 65
Query: 69 E--ACQNCGQMM--SGPVMVVGDHKFHPECFKCTSCSCCIGDGESYALVERSILYC 120
AC CGQ + S VM + +H +CF C++C + G+ + + S L+C
Sbjct: 66 NSGACSACGQSIPASELVMRAQGNVYHLKCFTCSTCRNRLVPGDRFHYINGS-LFC 120
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%)
Query: 550 FSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFA 609
+ +++ H N+IR GV+ K + + +VTE + G+L L+ Q V
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGML 153
Query: 610 RDIAAGMTYLHSMNLIHRDLNSQNCLV 636
R IA+GM YL M +HRDL ++N L+
Sbjct: 154 RGIASGMKYLSDMGAVHRDLAARNILI 180
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 80/166 (48%), Gaps = 31/166 (18%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LGQG FG+V+ T T V + + + + + FL+E++
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAI--KTLKPGTMSPEAFLQEAQ------------------ 65
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-DPGQPLPWGQRV 606
V++ L H +++ V+ + + +VTEY++ G L + L+ + G+ L Q V
Sbjct: 66 -------VMKKLRHEKLVQLYAVV-SEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLV 117
Query: 607 NFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE--VGSGFDFHLGQI 650
+ A IA+GM Y+ MN +HRDL + N LV E V DF L ++
Sbjct: 118 DMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL 163
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%)
Query: 550 FSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFA 609
+ +++ H N+IR GV+ K + + +VTE + G+L L+ Q V
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGML 153
Query: 610 RDIAAGMTYLHSMNLIHRDLNSQNCLV 636
R IA+GM YL M +HRDL ++N L+
Sbjct: 154 RGIASGMKYLSDMGYVHRDLAARNILI 180
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 81/194 (41%), Gaps = 42/194 (21%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LG G FG+VY+ ++ET + K + EE ++++ E
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVE-------------------- 84
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
+ +L S H N+++ + Y + L ++ E+ AGG + ++ + +PL Q
Sbjct: 85 -----IDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQV 139
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGSGFDFHLGQIYLIYVPYTLFILSAKTK 667
+ + YLH +IHRDL + N L G D L F +SAK
Sbjct: 140 VCKQTLDALNYLHDNKIIHRDLKAGNILFTLDG---DIKLAD----------FGVSAKNT 186
Query: 668 KTYYPNILKKASFI 681
+T I ++ SFI
Sbjct: 187 RT----IQRRDSFI 196
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 74/171 (43%), Gaps = 23/171 (13%)
Query: 470 EASKSRIFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESK 529
E SK R + D G LG+G FG VY +++ ++ LK L++
Sbjct: 24 EESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA------------- 70
Query: 530 QGLIYLIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTL 589
L G+ + L +V + L H N++R G + ++ L+ EY GT+
Sbjct: 71 -------QLEKAGVEHQLR--REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 121
Query: 590 KELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
LQ + + + ++A ++Y HS +IHRD+ +N L+ G
Sbjct: 122 YRELQKLSK-FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAG 171
>pdb|1RUT|X Chain X, Complex Of Lmo4 Lim Domains 1 And 2 With The Ldb1 Lid
Domain
Length = 188
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 57/114 (50%), Gaps = 7/114 (6%)
Query: 12 CAGCLNNIVEDEYVQALSQEWHTDCFRCSACDVMLDN---WYFEKDGLLFCKEDYNGKYG 68
CAGC I + + A+ WH+ C +CS+C L + + K G++ C+ DY +G
Sbjct: 8 CAGCGGKIADRFLLYAMDSYWHSRCLKCSSCQAQLGDIGTSSYTKSGMILCRNDYIRLFG 67
Query: 69 E--ACQNCGQMM--SGPVMVVGDHKFHPECFKCTSCSCCIGDGESYALVERSIL 118
AC CGQ + S VM + +H +CF C++C + G+ + + S+
Sbjct: 68 NSGACSACGQSIPASELVMRAQGNVYHLKCFTCSTCRNRLVPGDRFHYINGSLF 121
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 74/153 (48%), Gaps = 27/153 (17%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LG+G +G VY+ H+ETG+++ +K+ V E++ L+E
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQ---VPVESD---LQE-------------------- 70
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
++++++ +V+++ G +K+ L +V EY G++ ++++ + L +
Sbjct: 71 -IIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIAT 129
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
+ G+ YLH M IHRD+ + N L+ G
Sbjct: 130 ILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEG 162
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 80/166 (48%), Gaps = 31/166 (18%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LGQG FG+V+ T T V + + + + + FL+E++
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAI--KTLKPGTMSPEAFLQEAQ------------------ 62
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-DPGQPLPWGQRV 606
V++ L H +++ V+ + + +VTEY+ G+L + L+ + G+ L Q V
Sbjct: 63 -------VMKKLRHEKLVQLYAVV-SEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLV 114
Query: 607 NFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE--VGSGFDFHLGQI 650
+ + IA+GM Y+ MN +HRDL + N LV E V DF L ++
Sbjct: 115 DMSAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL 160
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 80/166 (48%), Gaps = 31/166 (18%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LGQG FG+V+ T T V + + + + + FL+E++
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAI--KTLKPGTMSPEAFLQEAQ------------------ 62
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-DPGQPLPWGQRV 606
V++ L H +++ V+ + + +VTEY+ G+L + L+ + G+ L Q V
Sbjct: 63 -------VMKKLRHEKLVQLYAVV-SEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLV 114
Query: 607 NFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE--VGSGFDFHLGQI 650
+ + IA+GM Y+ MN +HRDL + N LV E V DF L ++
Sbjct: 115 DMSAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL 160
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 74/171 (43%), Gaps = 23/171 (13%)
Query: 470 EASKSRIFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESK 529
E SK R + D G LG+G FG VY +++ ++ LK L++
Sbjct: 24 EESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA------------- 70
Query: 530 QGLIYLIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTL 589
L G+ + L +V + L H N++R G + ++ L+ EY GT+
Sbjct: 71 -------QLEKAGVEHQLR--REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 121
Query: 590 KELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
LQ + + + ++A ++Y HS +IHRD+ +N L+ G
Sbjct: 122 YRELQKLSK-FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAG 171
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 88/194 (45%), Gaps = 9/194 (4%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
+G+ +F +V ++ GEV++ KE E+A K K Y D + I
Sbjct: 34 IGESYF-KVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKN---IEKF 89
Query: 548 H--CFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQR 605
H ++++++L+SL H N+I+ V + LVTE+ GG L E + +
Sbjct: 90 HEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINR-HKFDECDA 148
Query: 606 VNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGSGFDFHLGQIYLIYVPYTLFILSAK 665
N + I +G+ YLH N++HRD+ +N L+ S + + L + L +
Sbjct: 149 ANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDR 208
Query: 666 TKKTYY--PNILKK 677
YY P +LKK
Sbjct: 209 LGTAYYIAPEVLKK 222
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 72/155 (46%), Gaps = 24/155 (15%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
+G+G FG V++ + V+ +K L D E E +I
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETE-------------------MIEKF 67
Query: 548 HCFS-QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRV 606
F +V ++ +L+H N+++ G+++ ++ V E++ G L L D P+ W ++
Sbjct: 68 QEFQREVFIMSNLNHPNIVKLYGLMHNPPRM--VMEFVPCGDLYHRLLDKAHPIKWSVKL 125
Query: 607 NFARDIAAGMTYLHSMN--LIHRDLNSQNCLVREV 639
DIA G+ Y+ + N ++HRDL S N ++ +
Sbjct: 126 RLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSL 160
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 72/155 (46%), Gaps = 24/155 (15%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
+G+G FG V++ + V+ +K L D E E +I
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETE-------------------MIEKF 67
Query: 548 HCFS-QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRV 606
F +V ++ +L+H N+++ G+++ ++ V E++ G L L D P+ W ++
Sbjct: 68 QEFQREVFIMSNLNHPNIVKLYGLMHNPPRM--VMEFVPCGDLYHRLLDKAHPIKWSVKL 125
Query: 607 NFARDIAAGMTYLHSMN--LIHRDLNSQNCLVREV 639
DIA G+ Y+ + N ++HRDL S N ++ +
Sbjct: 126 RLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSL 160
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 65/148 (43%), Gaps = 25/148 (16%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LG G FG+VY+ ++ET + K + EE ++++ E
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVE-------------------- 84
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
+ +L S H N+++ + Y + L ++ E+ AGG + ++ + +PL Q
Sbjct: 85 -----IDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQV 139
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCL 635
+ + YLH +IHRDL + N L
Sbjct: 140 VCKQTLDALNYLHDNKIIHRDLKAGNIL 167
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 74/171 (43%), Gaps = 23/171 (13%)
Query: 470 EASKSRIFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESK 529
E SK R + D G LG+G FG VY +++ ++ LK L++
Sbjct: 15 EESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA------------- 61
Query: 530 QGLIYLIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTL 589
L G+ + L +V + L H N++R G + ++ L+ EY GT+
Sbjct: 62 -------QLEKAGVEHQLR--REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 112
Query: 590 KELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
LQ + + + ++A ++Y HS +IHRD+ +N L+ G
Sbjct: 113 YRELQKLSK-FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAG 162
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 72/155 (46%), Gaps = 24/155 (15%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
+G+G FG V++ + V+ +K L D E E +I
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETE-------------------MIEKF 67
Query: 548 HCFS-QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRV 606
F +V ++ +L+H N+++ G+++ ++ V E++ G L L D P+ W ++
Sbjct: 68 QEFQREVFIMSNLNHPNIVKLYGLMHNPPRM--VMEFVPCGDLYHRLLDKAHPIKWSVKL 125
Query: 607 NFARDIAAGMTYLHSMN--LIHRDLNSQNCLVREV 639
DIA G+ Y+ + N ++HRDL S N ++ +
Sbjct: 126 RLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSL 160
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 65/148 (43%), Gaps = 25/148 (16%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LG G FG+VY+ ++ET + K + EE ++++ E
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVE-------------------- 84
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
+ +L S H N+++ + Y + L ++ E+ AGG + ++ + +PL Q
Sbjct: 85 -----IDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQV 139
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCL 635
+ + YLH +IHRDL + N L
Sbjct: 140 VCKQTLDALNYLHDNKIIHRDLKAGNIL 167
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 79/176 (44%), Gaps = 45/176 (25%)
Query: 481 DLVRGPLLGQGFFGQV-----YRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYL 535
D+V LG+G FG+V Y ++ + ++ +K L A K+F +E++
Sbjct: 16 DIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAE------ 69
Query: 536 IDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD 595
+L +L H ++++F GV L +V EY+ G L + L+
Sbjct: 70 -------------------LLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRA 110
Query: 596 ---------PGQP------LPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
GQP L Q ++ A IA+GM YL S + +HRDL ++NCLV
Sbjct: 111 HGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLV 166
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 47/87 (54%)
Query: 550 FSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFA 609
S+ +++ H N+I GV+ K + + ++TEY+ G+L L+ Q V
Sbjct: 57 LSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGML 116
Query: 610 RDIAAGMTYLHSMNLIHRDLNSQNCLV 636
R I +GM YL M+ +HRDL ++N LV
Sbjct: 117 RGIGSGMKYLSDMSYVHRDLAARNILV 143
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 47/87 (54%)
Query: 550 FSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFA 609
S+ +++ H N+I GV+ K + + ++TEY+ G+L L+ Q V
Sbjct: 78 LSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGML 137
Query: 610 RDIAAGMTYLHSMNLIHRDLNSQNCLV 636
R I +GM YL M+ +HRDL ++N LV
Sbjct: 138 RGIGSGMKYLSDMSAVHRDLAARNILV 164
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 47/87 (54%)
Query: 550 FSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFA 609
S+ +++ H N+I GV+ K + + ++TEY+ G+L L+ Q V
Sbjct: 63 LSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGML 122
Query: 610 RDIAAGMTYLHSMNLIHRDLNSQNCLV 636
R I +GM YL M+ +HRDL ++N LV
Sbjct: 123 RGIGSGMKYLSDMSYVHRDLAARNILV 149
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 74/152 (48%), Gaps = 29/152 (19%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LGQG FG+V+ T T V + + + + + FL+E++
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAI--KTLKPGTMSPEAFLQEAQ------------------ 231
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-DPGQPLPWGQRV 606
V++ L H +++ V+ + + +V EY++ G+L + L+ + G+ L Q V
Sbjct: 232 -------VMKKLRHEKLVQLYAVV-SEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLV 283
Query: 607 NFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
+ A IA+GM Y+ MN +HRDL + N LV E
Sbjct: 284 DMAAQIASGMAYVERMNYVHRDLRAANILVGE 315
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 74/152 (48%), Gaps = 29/152 (19%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LGQG FG+V+ T T V + + + + + FL+E++
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAI--KTLKPGTMSPEAFLQEAQ------------------ 65
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-DPGQPLPWGQRV 606
V++ L H +++ V+ + + +V EY++ G+L + L+ + G+ L Q V
Sbjct: 66 -------VMKKLRHEKLVQLYAVV-SEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLV 117
Query: 607 NFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
+ A IA+GM Y+ MN +HRDL + N LV E
Sbjct: 118 DMAAQIASGMAYVERMNYVHRDLRAANILVGE 149
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 80/166 (48%), Gaps = 31/166 (18%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LGQG FG+V+ T T V + + + + + FL+E++
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAI--KTLKPGTMSPEAFLQEAQ------------------ 65
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-DPGQPLPWGQRV 606
V++ L H +++ V+ + + +V EY++ G+L + L+ + G+ L Q V
Sbjct: 66 -------VMKKLRHEKLVQLYAVV-SEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLV 117
Query: 607 NFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE--VGSGFDFHLGQI 650
+ A IA+GM Y+ MN +HRDL + N LV E V DF L ++
Sbjct: 118 DMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL 163
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 75/160 (46%), Gaps = 27/160 (16%)
Query: 480 SDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLG 539
+D+ LG G +G+VY ++ + +K L E E+ FLKE+
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEA----------- 60
Query: 540 SHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD-PGQ 598
AV++ + H N+++ +GV ++ ++TE++ G L + L++ Q
Sbjct: 61 --------------AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ 106
Query: 599 PLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
+ + A I++ M YL N IHRDL ++NCLV E
Sbjct: 107 EVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE 146
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 75/160 (46%), Gaps = 27/160 (16%)
Query: 480 SDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLG 539
+D+ LG G +G+VY ++ + +K L E E+ FLKE+
Sbjct: 18 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEA----------- 65
Query: 540 SHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD-PGQ 598
AV++ + H N+++ +GV ++ ++TE++ G L + L++ Q
Sbjct: 66 --------------AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ 111
Query: 599 PLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
+ + A I++ M YL N IHRDL ++NCLV E
Sbjct: 112 EVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE 151
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 75/160 (46%), Gaps = 27/160 (16%)
Query: 480 SDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLG 539
+D+ LG G +G+VY ++ + +K L E E+ FLKE+
Sbjct: 11 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEA----------- 58
Query: 540 SHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD-PGQ 598
AV++ + H N+++ +GV ++ ++TE++ G L + L++ Q
Sbjct: 59 --------------AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ 104
Query: 599 PLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
+ + A I++ M YL N IHRDL ++NCLV E
Sbjct: 105 EVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE 144
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 75/160 (46%), Gaps = 27/160 (16%)
Query: 480 SDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLG 539
+D+ LG G +G+VY ++ + +K L E E+ FLKE+
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEA----------- 60
Query: 540 SHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD-PGQ 598
AV++ + H N+++ +GV ++ ++TE++ G L + L++ Q
Sbjct: 61 --------------AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ 106
Query: 599 PLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
+ + A I++ M YL N IHRDL ++NCLV E
Sbjct: 107 EVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE 146
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 75/165 (45%), Gaps = 37/165 (22%)
Query: 480 SDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLG 539
+D+ LG G +G+VY ++ + +K L E E+ FLKE+
Sbjct: 18 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEA----------- 65
Query: 540 SHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQP 599
AV++ + H N+++ +GV ++ ++ E++ G L + L++ +
Sbjct: 66 --------------AVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNR- 110
Query: 600 LPWGQRVN------FARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
Q VN A I++ M YL N IHRDL ++NCLV E
Sbjct: 111 ----QEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE 151
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 80/166 (48%), Gaps = 31/166 (18%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LGQG FG+V+ T T V + + + + + FL+E++
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAI--KTLKPGTMSPEAFLQEAQ------------------ 65
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-DPGQPLPWGQRV 606
V++ L H +++ V+ + + +V EY++ G+L + L+ + G+ L Q V
Sbjct: 66 -------VMKKLRHEKLVQLYAVV-SEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLV 117
Query: 607 NFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE--VGSGFDFHLGQI 650
+ A IA+GM Y+ MN +HRDL + N LV E V DF L ++
Sbjct: 118 DMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL 163
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 74/167 (44%), Gaps = 31/167 (18%)
Query: 476 IFRASDLVRGPLLGQGFFGQV----YRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQG 531
IF L LG+G FG V Y TG ++ +K+L + +++F +E
Sbjct: 7 IFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQRE---- 62
Query: 532 LIYLIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKD--RKLNLVTEYIAGGTL 589
+ +L++LH ++++ GV Y + L LV EY+ G L
Sbjct: 63 ---------------------IQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCL 101
Query: 590 KELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
++ LQ L + + ++ I GM YL S +HRDL ++N LV
Sbjct: 102 RDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILV 148
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 83/197 (42%), Gaps = 38/197 (19%)
Query: 480 SDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLG 539
+D+ ++G+G FGQV + ++ G + + + R+ E A K+ ++ L L LG
Sbjct: 25 NDIKFQDVIGEGNFGQVLKARIKKDG-LRMDAAIKRMKEYASKDDHRDFAGELEVLCKLG 83
Query: 540 SHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ----- 594
HH N+I +G L L EY G L + L+
Sbjct: 84 --------------------HHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVL 123
Query: 595 --DPG--------QPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE--VGSG 642
DP L Q ++FA D+A GM YL IHRDL ++N LV E V
Sbjct: 124 ETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKI 183
Query: 643 FDFHLGQIYLIYVPYTL 659
DF L + +YV T+
Sbjct: 184 ADFGLSRGQEVYVKKTM 200
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 75/166 (45%), Gaps = 21/166 (12%)
Query: 472 SKSRIFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQG 531
++ RI + ++L R +LG G FG VY+ GE + + ++ E
Sbjct: 30 AQLRILKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNE------------ 77
Query: 532 LIYLIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKE 591
+ G N+ + ++ S+ H +++R +GV + LVT+ + G L E
Sbjct: 78 --------TTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQLVTQLMPHGCLLE 128
Query: 592 LLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVR 637
+ + + +N+ IA GM YL L+HRDL ++N LV+
Sbjct: 129 YVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVK 174
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 83/197 (42%), Gaps = 38/197 (19%)
Query: 480 SDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLG 539
+D+ ++G+G FGQV + ++ G + + + R+ E A K+ ++ L L LG
Sbjct: 15 NDIKFQDVIGEGNFGQVLKARIKKDG-LRMDAAIKRMKEYASKDDHRDFAGELEVLCKLG 73
Query: 540 SHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ----- 594
HH N+I +G L L EY G L + L+
Sbjct: 74 --------------------HHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVL 113
Query: 595 --DPG--------QPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE--VGSG 642
DP L Q ++FA D+A GM YL IHRDL ++N LV E V
Sbjct: 114 ETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKI 173
Query: 643 FDFHLGQIYLIYVPYTL 659
DF L + +YV T+
Sbjct: 174 ADFGLSRGQEVYVKKTM 190
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 74/167 (44%), Gaps = 31/167 (18%)
Query: 476 IFRASDLVRGPLLGQGFFGQV----YRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQG 531
IF L LG+G FG V Y TG ++ +K+L + +++F +E
Sbjct: 19 IFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQRE---- 74
Query: 532 LIYLIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKD--RKLNLVTEYIAGGTL 589
+ +L++LH ++++ GV Y + L LV EY+ G L
Sbjct: 75 ---------------------IQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCL 113
Query: 590 KELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
++ LQ L + + ++ I GM YL S +HRDL ++N LV
Sbjct: 114 RDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILV 160
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 74/167 (44%), Gaps = 31/167 (18%)
Query: 476 IFRASDLVRGPLLGQGFFGQV----YRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQG 531
IF L LG+G FG V Y TG ++ +K+L + +++F +E
Sbjct: 6 IFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQRE---- 61
Query: 532 LIYLIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKD--RKLNLVTEYIAGGTL 589
+ +L++LH ++++ GV Y + L LV EY+ G L
Sbjct: 62 ---------------------IQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCL 100
Query: 590 KELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
++ LQ L + + ++ I GM YL S +HRDL ++N LV
Sbjct: 101 RDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILV 147
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 75/165 (45%), Gaps = 37/165 (22%)
Query: 480 SDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLG 539
+D+ LG G +G+VY ++ + +K L E E+ FLKE+
Sbjct: 14 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEA----------- 61
Query: 540 SHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQP 599
AV++ + H N+++ +GV ++ ++ E++ G L + L++ +
Sbjct: 62 --------------AVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNR- 106
Query: 600 LPWGQRVN------FARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
Q VN A I++ M YL N IHRDL ++NCLV E
Sbjct: 107 ----QEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE 147
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 71/155 (45%), Gaps = 31/155 (20%)
Query: 488 LGQGFFGQV----YRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGL 543
LG+G FG V Y TG ++ +K+L + +++F +E
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQRE---------------- 58
Query: 544 INNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRK--LNLVTEYIAGGTLKELLQDPGQPLP 601
+ +L++LH ++++ GV Y + L LV EY+ G L++ LQ L
Sbjct: 59 ---------IQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLD 109
Query: 602 WGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
+ + ++ I GM YL S +HRDL ++N LV
Sbjct: 110 ASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILV 144
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 82/171 (47%), Gaps = 32/171 (18%)
Query: 472 SKSRIFRASDLVRGPLLGQGFFGQV----YRVTHRETGEVMVLKELYRVDEEAEKNFLKE 527
S +F L + LG+G FG+V Y T+ TGE++ +K L
Sbjct: 1 SDPTVFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKAL-------------- 46
Query: 528 SKQGLIYLIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYK--DRKLNLVTEYIA 585
K+G + G ++ +LR+L+H +++++ G ++ + LV EY+
Sbjct: 47 -KEGCGPQLRSGWQ---------REIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVP 96
Query: 586 GGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
G+L++ L P + Q + FA+ I GM YLH+ + IHR L ++N L+
Sbjct: 97 LGSLRDYL--PRHCVGLAQLLLFAQQICEGMAYLHAQHYIHRALAARNVLL 145
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 75/166 (45%), Gaps = 21/166 (12%)
Query: 472 SKSRIFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQG 531
++ RI + ++L R +LG G FG VY+ GE + + ++ E
Sbjct: 7 AQLRILKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNE------------ 54
Query: 532 LIYLIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKE 591
+ G N+ + ++ S+ H +++R +GV + LVT+ + G L E
Sbjct: 55 --------TTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQLVTQLMPHGCLLE 105
Query: 592 LLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVR 637
+ + + +N+ IA GM YL L+HRDL ++N LV+
Sbjct: 106 YVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVK 151
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 71/160 (44%), Gaps = 28/160 (17%)
Query: 480 SDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLG 539
++L ++G G FG+VYR + DE A K + + + I+
Sbjct: 7 AELTLEEIIGIGGFGKVYRA-------------FWIGDEVAVKAARHDPDEDISQTIE-- 51
Query: 540 SHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQP 599
+ + + L H N+I GV K+ L LV E+ GG L +L G+
Sbjct: 52 --------NVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLS--GKR 101
Query: 600 LPWGQRVNFARDIAAGMTYLHS---MNLIHRDLNSQNCLV 636
+P VN+A IA GM YLH + +IHRDL S N L+
Sbjct: 102 IPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILI 141
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 2/93 (2%)
Query: 547 LHCF-SQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQR 605
L F ++V VLR H N++ F+G K +L +VT++ G +L L +
Sbjct: 64 LQAFKNEVGVLRKTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHASETKFEMKKL 122
Query: 606 VNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
++ AR A GM YLH+ ++IHRDL S N + E
Sbjct: 123 IDIARQTARGMDYLHAKSIIHRDLKSNNIFLHE 155
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 2/93 (2%)
Query: 547 LHCF-SQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQR 605
L F ++V VLR H N++ F+G K +L +VT++ G +L L +
Sbjct: 52 LQAFKNEVGVLRKTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHASETKFEMKKL 110
Query: 606 VNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
++ AR A GM YLH+ ++IHRDL S N + E
Sbjct: 111 IDIARQTARGMDYLHAKSIIHRDLKSNNIFLHE 143
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 73/169 (43%), Gaps = 23/169 (13%)
Query: 472 SKSRIFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQG 531
SK R + D G LG+G FG VY +++ ++ LK L++
Sbjct: 2 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA--------------- 46
Query: 532 LIYLIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKE 591
L G+ + L +V + L H N++R G + ++ L+ EY GT+
Sbjct: 47 -----QLEKAGVEHQLR--REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYR 99
Query: 592 LLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
LQ + + + ++A ++Y HS +IHRD+ +N L+ G
Sbjct: 100 ELQKLSK-FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAG 147
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 74/169 (43%), Gaps = 23/169 (13%)
Query: 472 SKSRIFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQG 531
SK R + D G LG+G FG VY +++ ++ LK L++ E K G
Sbjct: 5 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLE---------KAG 55
Query: 532 LIYLIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKE 591
+ + + +V + L H N++R G + ++ L+ EY GT+
Sbjct: 56 VEHQLR-------------REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYR 102
Query: 592 LLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
LQ + + + ++A ++Y HS +IHRD+ +N L+ G
Sbjct: 103 ELQKLSK-FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAG 150
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 79/166 (47%), Gaps = 31/166 (18%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LGQG FG+V+ T T V + + + + + FL+E++
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAI--KTLKPGTMSPEAFLQEAQ------------------ 65
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-DPGQPLPWGQRV 606
V++ L H +++ V+ + + +V EY++ G L + L+ + G+ L Q V
Sbjct: 66 -------VMKKLRHEKLVQLYAVV-SEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLV 117
Query: 607 NFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE--VGSGFDFHLGQI 650
+ A IA+GM Y+ MN +HRDL + N LV E V DF L ++
Sbjct: 118 DMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL 163
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 73/169 (43%), Gaps = 23/169 (13%)
Query: 472 SKSRIFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQG 531
SK R + D G LG+G FG VY +++ ++ LK L++
Sbjct: 1 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA--------------- 45
Query: 532 LIYLIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKE 591
L G+ + L +V + L H N++R G + ++ L+ EY GT+
Sbjct: 46 -----QLEKAGVEHQLR--REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYR 98
Query: 592 LLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
LQ + + + ++A ++Y HS +IHRD+ +N L+ G
Sbjct: 99 ELQKLSK-FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAG 146
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 73/169 (43%), Gaps = 23/169 (13%)
Query: 472 SKSRIFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQG 531
SK R + D G LG+G FG VY +++ ++ LK L++
Sbjct: 1 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA--------------- 45
Query: 532 LIYLIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKE 591
L G+ + L +V + L H N++R G + ++ L+ EY GT+
Sbjct: 46 -----QLEKAGVEHQLR--REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYR 98
Query: 592 LLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
LQ + + + ++A ++Y HS +IHRD+ +N L+ G
Sbjct: 99 ELQKLSK-FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAG 146
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 74/169 (43%), Gaps = 23/169 (13%)
Query: 472 SKSRIFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQG 531
SK R + D G LG+G FG VY +++ ++ LK L++ E K G
Sbjct: 2 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLE---------KAG 52
Query: 532 LIYLIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKE 591
+ + + +V + L H N++R G + ++ L+ EY GT+
Sbjct: 53 VEHQLR-------------REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYR 99
Query: 592 LLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
LQ + + + ++A ++Y HS +IHRD+ +N L+ G
Sbjct: 100 ELQKLSK-FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAG 147
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 73/169 (43%), Gaps = 23/169 (13%)
Query: 472 SKSRIFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQG 531
SK R + D G LG+G FG VY +++ ++ LK L++
Sbjct: 3 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA--------------- 47
Query: 532 LIYLIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKE 591
L G+ + L +V + L H N++R G + ++ L+ EY GT+
Sbjct: 48 -----QLEKAGVEHQLR--REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYR 100
Query: 592 LLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
LQ + + + ++A ++Y HS +IHRD+ +N L+ G
Sbjct: 101 ELQKLSK-FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAG 148
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%)
Query: 550 FSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFA 609
S+ +++ H N+IR GV+ + ++TE++ G L L+ Q V
Sbjct: 63 LSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGML 122
Query: 610 RDIAAGMTYLHSMNLIHRDLNSQNCLV 636
R IA+GM YL M+ +HRDL ++N LV
Sbjct: 123 RGIASGMRYLAEMSYVHRDLAARNILV 149
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 81/167 (48%), Gaps = 32/167 (19%)
Query: 476 IFRASDLVRGPLLGQGFFGQV----YRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQG 531
+F L + LG+G FG+V Y T+ TGE++ +K L K+G
Sbjct: 4 VFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKAL---------------KEG 48
Query: 532 LIYLIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYK--DRKLNLVTEYIAGGTL 589
+ G ++ +LR+L+H +++++ G ++ + LV EY+ G+L
Sbjct: 49 CGPQLRSGWQ---------REIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSL 99
Query: 590 KELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
++ L P + Q + FA+ I GM YLH+ + IHR L ++N L+
Sbjct: 100 RDYL--PRHCVGLAQLLLFAQQICEGMAYLHAQHYIHRALAARNVLL 144
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 76/165 (46%), Gaps = 37/165 (22%)
Query: 480 SDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLG 539
+D+ LG G +G+VY ++ + +K L E E+ FLKE+
Sbjct: 217 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEA----------- 264
Query: 540 SHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQP 599
AV++ + H N+++ +GV ++ ++TE++ G L + L++ +
Sbjct: 265 --------------AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR- 309
Query: 600 LPWGQRVN------FARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
Q VN A I++ M YL N IHR+L ++NCLV E
Sbjct: 310 ----QEVNAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGE 350
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 74/169 (43%), Gaps = 23/169 (13%)
Query: 472 SKSRIFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQG 531
SK R + D G LG+G FG VY +++ ++ LK L++ E K G
Sbjct: 5 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLE---------KAG 55
Query: 532 LIYLIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKE 591
+ + + +V + L H N++R G + ++ L+ EY GT+
Sbjct: 56 VEHQLR-------------REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYR 102
Query: 592 LLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
LQ + + + ++A ++Y HS +IHRD+ +N L+ G
Sbjct: 103 ELQKLSK-FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAG 150
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%)
Query: 550 FSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFA 609
S+ +++ H N+IR GV+ + ++TE++ G L L+ Q V
Sbjct: 65 LSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGML 124
Query: 610 RDIAAGMTYLHSMNLIHRDLNSQNCLV 636
R IA+GM YL M+ +HRDL ++N LV
Sbjct: 125 RGIASGMRYLAEMSYVHRDLAARNILV 151
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 74/169 (43%), Gaps = 23/169 (13%)
Query: 472 SKSRIFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQG 531
SK R + D G LG+G FG VY +++ ++ LK L++ E K G
Sbjct: 5 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLE---------KAG 55
Query: 532 LIYLIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKE 591
+ + + +V + L H N++R G + ++ L+ EY GT+
Sbjct: 56 VEHQLR-------------REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYR 102
Query: 592 LLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
LQ + + + ++A ++Y HS +IHRD+ +N L+ G
Sbjct: 103 ELQKLSK-FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAG 150
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 76/165 (46%), Gaps = 37/165 (22%)
Query: 480 SDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLG 539
+D+ LG G +G+VY ++ + +K L E E+ FLKE+
Sbjct: 259 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEA----------- 306
Query: 540 SHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQP 599
AV++ + H N+++ +GV ++ ++TE++ G L + L++ +
Sbjct: 307 --------------AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR- 351
Query: 600 LPWGQRVN------FARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
Q VN A I++ M YL N IHR+L ++NCLV E
Sbjct: 352 ----QEVNAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGE 392
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 74/169 (43%), Gaps = 23/169 (13%)
Query: 472 SKSRIFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQG 531
SK R + D G LG+G FG VY +++ ++ LK L++ E K G
Sbjct: 3 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLE---------KAG 53
Query: 532 LIYLIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKE 591
+ + + +V + L H N++R G + ++ L+ EY GT+
Sbjct: 54 VEHQLR-------------REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYR 100
Query: 592 LLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
LQ + + + ++A ++Y HS +IHRD+ +N L+ G
Sbjct: 101 ELQKLSK-FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAG 148
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 73/170 (42%), Gaps = 23/170 (13%)
Query: 472 SKSRIFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQG 531
SK R + D G LG+G FG VY +++ ++ LK L++
Sbjct: 3 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA--------------- 47
Query: 532 LIYLIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKE 591
L G+ + L +V + L H N++R G + ++ L+ EY GT+
Sbjct: 48 -----QLEKAGVEHQLR--REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYR 100
Query: 592 LLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS 641
LQ + + + ++A ++Y HS +IHRD+ +N L+ G
Sbjct: 101 ELQKLSK-FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE 149
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 73/170 (42%), Gaps = 23/170 (13%)
Query: 472 SKSRIFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQG 531
SK R + D G LG+G FG VY +++ ++ LK L++
Sbjct: 3 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA--------------- 47
Query: 532 LIYLIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKE 591
L G+ + L +V + L H N++R G + ++ L+ EY GT+
Sbjct: 48 -----QLEKAGVEHQLR--REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYR 100
Query: 592 LLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS 641
LQ + + + ++A ++Y HS +IHRD+ +N L+ G
Sbjct: 101 ELQKLSK-FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE 149
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 74/160 (46%), Gaps = 27/160 (16%)
Query: 480 SDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLG 539
+D+ LG G +G+VY ++ + +K L E E+ FLKE+
Sbjct: 11 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEA----------- 58
Query: 540 SHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD-PGQ 598
AV++ + H N+++ +GV ++ ++ E++ G L + L++ Q
Sbjct: 59 --------------AVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQ 104
Query: 599 PLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
+ + A I++ M YL N IHRDL ++NCLV E
Sbjct: 105 EVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE 144
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 73/161 (45%), Gaps = 30/161 (18%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLG-SHGLINN 546
LGQG FG VY E K +K+ + + + + + +
Sbjct: 33 LGQGSFGMVY--------------------EGVAKGVVKDEPETRVAIKTVNEAASMRER 72
Query: 547 LHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD--PGQ------ 598
+ ++ +V++ + H+V+R +GV+ + + ++ E + G LK L+ P
Sbjct: 73 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVL 132
Query: 599 -PLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
P + + A +IA GM YL++ +HRDL ++NC+V E
Sbjct: 133 APPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE 173
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 79/173 (45%), Gaps = 33/173 (19%)
Query: 482 LVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSH 541
LV G LG+G FGQV VL E +D++ +K + L +
Sbjct: 15 LVLGKPLGEGAFGQV------------VLAEAIGLDKDKPNRV---TKVAVKMLKSDATE 59
Query: 542 GLINNLHCFSQVAVLRSL-HHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ------ 594
+++L S++ +++ + H N+I +G +D L ++ EY + G L+E LQ
Sbjct: 60 KDLSDL--ISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPG 117
Query: 595 ---------DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
+P + L V+ A +A GM YL S IHRDL ++N LV E
Sbjct: 118 LEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTE 170
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 74/160 (46%), Gaps = 27/160 (16%)
Query: 480 SDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLG 539
+D+ LG G +G+VY ++ + +K L E E+ FLKE+
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEA----------- 60
Query: 540 SHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD-PGQ 598
AV++ + H N+++ +GV ++ ++ E++ G L + L++ Q
Sbjct: 61 --------------AVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQ 106
Query: 599 PLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
+ + A I++ M YL N IHRDL ++NCLV E
Sbjct: 107 EVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE 146
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 73/169 (43%), Gaps = 23/169 (13%)
Query: 472 SKSRIFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQG 531
SK R + D G LG+G FG VY +++ ++ LK L++
Sbjct: 5 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA--------------- 49
Query: 532 LIYLIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKE 591
L G+ + L +V + L H N++R G + ++ L+ EY G + +
Sbjct: 50 -----QLEKAGVEHQLR--REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYK 102
Query: 592 LLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
LQ + + + ++A ++Y HS +IHRD+ +N L+ G
Sbjct: 103 ELQKLSK-FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAG 150
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 79/173 (45%), Gaps = 33/173 (19%)
Query: 482 LVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSH 541
LV G LG+G FGQV VL E +D++ +K + L +
Sbjct: 23 LVLGKPLGEGAFGQV------------VLAEAIGLDKDKPNRV---TKVAVKMLKSDATE 67
Query: 542 GLINNLHCFSQVAVLRSL-HHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ------ 594
+++L S++ +++ + H N+I +G +D L ++ EY + G L+E LQ
Sbjct: 68 KDLSDL--ISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPG 125
Query: 595 ---------DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
+P + L V+ A +A GM YL S IHRDL ++N LV E
Sbjct: 126 LEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTE 178
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 79/173 (45%), Gaps = 33/173 (19%)
Query: 482 LVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSH 541
LV G LG+G FGQV VL E +D++ +K + L +
Sbjct: 30 LVLGKPLGEGAFGQV------------VLAEAIGLDKDKPNRV---TKVAVKMLKSDATE 74
Query: 542 GLINNLHCFSQVAVLRSL-HHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ------ 594
+++L S++ +++ + H N+I +G +D L ++ EY + G L+E LQ
Sbjct: 75 KDLSDL--ISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPG 132
Query: 595 ---------DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
+P + L V+ A +A GM YL S IHRDL ++N LV E
Sbjct: 133 LEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTE 185
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 73/161 (45%), Gaps = 30/161 (18%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLG-SHGLINN 546
LGQG FG VY E K +K+ + + + + + +
Sbjct: 23 LGQGSFGMVY--------------------EGVAKGVVKDEPETRVAIKTVNEAASMRER 62
Query: 547 LHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD--PGQ------ 598
+ ++ +V++ + H+V+R +GV+ + + ++ E + G LK L+ P
Sbjct: 63 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVL 122
Query: 599 -PLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
P + + A +IA GM YL++ +HRDL ++NC+V E
Sbjct: 123 APPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE 163
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 82/197 (41%), Gaps = 38/197 (19%)
Query: 480 SDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLG 539
+D+ ++G+G FGQV + ++ G M + R+ E A K+ ++ L L LG
Sbjct: 22 NDIKFQDVIGEGNFGQVLKARIKKDGLRMD-AAIKRMKEYASKDDHRDFAGELEVLCKLG 80
Query: 540 SHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ----- 594
HH N+I +G L L EY G L + L+
Sbjct: 81 --------------------HHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVL 120
Query: 595 --DPG--------QPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE--VGSG 642
DP L Q ++FA D+A GM YL IHR+L ++N LV E V
Sbjct: 121 ETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRNLAARNILVGENYVAKI 180
Query: 643 FDFHLGQIYLIYVPYTL 659
DF L + +YV T+
Sbjct: 181 ADFGLSRGQEVYVKKTM 197
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 74/161 (45%), Gaps = 30/161 (18%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLG-SHGLINN 546
LGQG FG VY E K +K+ + + + + + +
Sbjct: 18 LGQGSFGMVY--------------------EGVAKGVVKDEPETRVAIKTVNEAASMRER 57
Query: 547 LHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLK--------ELLQDPG- 597
+ ++ +V++ + H+V+R +GV+ + + ++ E + G LK E+ +P
Sbjct: 58 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 117
Query: 598 QPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
P + + A +IA GM YL++ +HRDL ++NC+V E
Sbjct: 118 APPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE 158
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 79/173 (45%), Gaps = 33/173 (19%)
Query: 482 LVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSH 541
LV G LG+G FGQV VL E +D++ +K + L +
Sbjct: 30 LVLGKPLGEGAFGQV------------VLAEAIGLDKDKPNRV---TKVAVKMLKSDATE 74
Query: 542 GLINNLHCFSQVAVLRSL-HHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ------ 594
+++L S++ +++ + H N+I +G +D L ++ EY + G L+E LQ
Sbjct: 75 KDLSDL--ISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPG 132
Query: 595 ---------DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
+P + L V+ A +A GM YL S IHRDL ++N LV E
Sbjct: 133 LEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTE 185
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 79/173 (45%), Gaps = 33/173 (19%)
Query: 482 LVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSH 541
LV G LG+G FGQV VL E +D++ +K + L +
Sbjct: 30 LVLGKPLGEGAFGQV------------VLAEAIGLDKDKPNRV---TKVAVKMLKSDATE 74
Query: 542 GLINNLHCFSQVAVLRSL-HHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ------ 594
+++L S++ +++ + H N+I +G +D L ++ EY + G L+E LQ
Sbjct: 75 KDLSDL--ISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPG 132
Query: 595 ---------DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
+P + L V+ A +A GM YL S IHRDL ++N LV E
Sbjct: 133 LEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTE 185
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 74/160 (46%), Gaps = 27/160 (16%)
Query: 480 SDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLG 539
+D+ LG G +G+VY ++ + +K L E E+ FLKE+
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEA----------- 60
Query: 540 SHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD-PGQ 598
AV++ + H N+++ +GV ++ ++ E++ G L + L++ Q
Sbjct: 61 --------------AVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQ 106
Query: 599 PLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
+ + A I++ M YL N IHRDL ++NCLV E
Sbjct: 107 EVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE 146
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 79/173 (45%), Gaps = 33/173 (19%)
Query: 482 LVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSH 541
LV G LG+G FGQV VL E +D++ +K + L +
Sbjct: 30 LVLGKPLGEGAFGQV------------VLAEAIGLDKDKPNRV---TKVAVKMLKSDATE 74
Query: 542 GLINNLHCFSQVAVLRSL-HHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ------ 594
+++L S++ +++ + H N+I +G +D L ++ EY + G L+E LQ
Sbjct: 75 KDLSDL--ISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPG 132
Query: 595 ---------DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
+P + L V+ A +A GM YL S IHRDL ++N LV E
Sbjct: 133 LEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTE 185
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 79/173 (45%), Gaps = 33/173 (19%)
Query: 482 LVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSH 541
LV G LG+G FGQV VL E +D++ +K + L +
Sbjct: 22 LVLGKPLGEGAFGQV------------VLAEAIGLDKDKPNRV---TKVAVKMLKSDATE 66
Query: 542 GLINNLHCFSQVAVLRSL-HHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ------ 594
+++L S++ +++ + H N+I +G +D L ++ EY + G L+E LQ
Sbjct: 67 KDLSDL--ISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPG 124
Query: 595 ---------DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
+P + L V+ A +A GM YL S IHRDL ++N LV E
Sbjct: 125 LEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTE 177
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 74/161 (45%), Gaps = 30/161 (18%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLG-SHGLINN 546
LGQG FG VY E K +K+ + + + + + +
Sbjct: 26 LGQGSFGMVY--------------------EGVAKGVVKDEPETRVAIKTVNEAASMRER 65
Query: 547 LHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLK--------ELLQDPG- 597
+ ++ +V++ + H+V+R +GV+ + + ++ E + G LK E+ +P
Sbjct: 66 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 125
Query: 598 QPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
P + + A +IA GM YL++ +HRDL ++NC+V E
Sbjct: 126 APPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE 166
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 74/161 (45%), Gaps = 30/161 (18%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLG-SHGLINN 546
LGQG FG VY E K +K+ + + + + + +
Sbjct: 27 LGQGSFGMVY--------------------EGVAKGVVKDEPETRVAIKTVNEAASMRER 66
Query: 547 LHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLK--------ELLQDPG- 597
+ ++ +V++ + H+V+R +GV+ + + ++ E + G LK E+ +P
Sbjct: 67 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 126
Query: 598 QPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
P + + A +IA GM YL++ +HRDL ++NC+V E
Sbjct: 127 APPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE 167
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 79/173 (45%), Gaps = 33/173 (19%)
Query: 482 LVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSH 541
LV G LG+G FGQV VL E +D++ +K + L +
Sbjct: 19 LVLGKPLGEGAFGQV------------VLAEAIGLDKDKPNRV---TKVAVKMLKSDATE 63
Query: 542 GLINNLHCFSQVAVLRSL-HHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ------ 594
+++L S++ +++ + H N+I +G +D L ++ EY + G L+E LQ
Sbjct: 64 KDLSDL--ISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPG 121
Query: 595 ---------DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
+P + L V+ A +A GM YL S IHRDL ++N LV E
Sbjct: 122 LEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTE 174
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 74/161 (45%), Gaps = 30/161 (18%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLG-SHGLINN 546
LGQG FG VY E K +K+ + + + + + +
Sbjct: 26 LGQGSFGMVY--------------------EGVAKGVVKDEPETRVAIKTVNEAASMRER 65
Query: 547 LHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLK--------ELLQDPG- 597
+ ++ +V++ + H+V+R +GV+ + + ++ E + G LK E+ +P
Sbjct: 66 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 125
Query: 598 QPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
P + + A +IA GM YL++ +HRDL ++NC+V E
Sbjct: 126 APPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE 166
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 74/161 (45%), Gaps = 30/161 (18%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLG-SHGLINN 546
LGQG FG VY E K +K+ + + + + + +
Sbjct: 33 LGQGSFGMVY--------------------EGVAKGVVKDEPETRVAIKTVNEAASMRER 72
Query: 547 LHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLK--------ELLQDPG- 597
+ ++ +V++ + H+V+R +GV+ + + ++ E + G LK E+ +P
Sbjct: 73 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 132
Query: 598 QPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
P + + A +IA GM YL++ +HRDL ++NC+V E
Sbjct: 133 APPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE 173
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 74/160 (46%), Gaps = 27/160 (16%)
Query: 480 SDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLG 539
+D+ LG G +G+VY ++ + +K L E E+ FLKE+
Sbjct: 32 TDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEE-FLKEA----------- 79
Query: 540 SHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD-PGQ 598
AV++ + H N+++ +GV + +VTEY+ G L + L++ +
Sbjct: 80 --------------AVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNRE 125
Query: 599 PLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
+ + A I++ M YL N IHRDL ++NCLV E
Sbjct: 126 EVTAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE 165
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 76/178 (42%), Gaps = 50/178 (28%)
Query: 488 LGQGFFGQVYRVTHRETG----EVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGL 543
+G+G FG+V++ R G E + + + EEA + + ++
Sbjct: 55 IGEGAFGRVFQA--RAPGLLPYEPFTMVAVKMLKEEASADMQADFQR------------- 99
Query: 544 INNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD-------- 595
+ A++ + N+++ +GV + + L+ EY+A G L E L+
Sbjct: 100 --------EAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCS 151
Query: 596 --------------PGQP-LPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
PG P L +++ AR +AAGM YL +HRDL ++NCLV E
Sbjct: 152 LSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGE 209
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 73/169 (43%), Gaps = 23/169 (13%)
Query: 472 SKSRIFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQG 531
SK R + D G LG+G FG VY +++ ++ LK L++
Sbjct: 5 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA--------------- 49
Query: 532 LIYLIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKE 591
L G+ + L +V + L H N++R G + ++ L+ EY G + +
Sbjct: 50 -----QLEKAGVEHQLR--REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYK 102
Query: 592 LLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
LQ + + + ++A ++Y HS +IHRD+ +N L+ G
Sbjct: 103 ELQKLSK-FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAG 150
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 74/161 (45%), Gaps = 30/161 (18%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLG-SHGLINN 546
LGQG FG VY E K +K+ + + + + + +
Sbjct: 24 LGQGSFGMVY--------------------EGVAKGVVKDEPETRVAIKTVNEAASMRER 63
Query: 547 LHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLK--------ELLQDPG- 597
+ ++ +V++ + H+V+R +GV+ + + ++ E + G LK E+ +P
Sbjct: 64 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 123
Query: 598 QPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
P + + A +IA GM YL++ +HRDL ++NC+V E
Sbjct: 124 APPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE 164
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 74/161 (45%), Gaps = 30/161 (18%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLG-SHGLINN 546
LGQG FG VY E K +K+ + + + + + +
Sbjct: 27 LGQGSFGMVY--------------------EGVAKGVVKDEPETRVAIKTVNEAASMRER 66
Query: 547 LHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLK--------ELLQDPG- 597
+ ++ +V++ + H+V+R +GV+ + + ++ E + G LK E+ +P
Sbjct: 67 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 126
Query: 598 QPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
P + + A +IA GM YL++ +HRDL ++NC+V E
Sbjct: 127 APPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE 167
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 88/203 (43%), Gaps = 31/203 (15%)
Query: 481 DLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGS 540
DLV+ LG+G +G+V +R T E + +K ++D+
Sbjct: 10 DLVQ--TLGEGAYGEVQLAVNRVTEEAVAVK-----------------------IVDM-K 43
Query: 541 HGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-DPGQP 599
+ + ++ + + L+H NV++F G + L EY +GG L + ++ D G P
Sbjct: 44 RAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMP 103
Query: 600 LPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS--GFDFHLGQIYLIYVPY 657
P QR F + AG+ YLH + + HRD+ +N L+ E + DF L ++
Sbjct: 104 EPDAQR--FFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161
Query: 658 TLFILSAKTKKTYYPNILKKASF 680
L T P +LK+ F
Sbjct: 162 RLLNKMCGTLPYVAPELLKRREF 184
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 88/203 (43%), Gaps = 31/203 (15%)
Query: 481 DLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGS 540
DLV+ LG+G +G+V +R T E + +K ++D+
Sbjct: 10 DLVQ--TLGEGAYGEVQLAVNRVTEEAVAVK-----------------------IVDM-K 43
Query: 541 HGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-DPGQP 599
+ + ++ + + L+H NV++F G + L EY +GG L + ++ D G P
Sbjct: 44 RAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMP 103
Query: 600 LPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS--GFDFHLGQIYLIYVPY 657
P QR F + AG+ YLH + + HRD+ +N L+ E + DF L ++
Sbjct: 104 EPDAQR--FFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161
Query: 658 TLFILSAKTKKTYYPNILKKASF 680
L T P +LK+ F
Sbjct: 162 RLLNKMCGTLPYVAPELLKRREF 184
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 88/203 (43%), Gaps = 31/203 (15%)
Query: 481 DLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGS 540
DLV+ LG+G +G+V +R T E + +K ++D+
Sbjct: 10 DLVQ--TLGEGAYGEVQLAVNRVTEEAVAVK-----------------------IVDM-K 43
Query: 541 HGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-DPGQP 599
+ + ++ + + L+H NV++F G + L EY +GG L + ++ D G P
Sbjct: 44 RAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMP 103
Query: 600 LPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS--GFDFHLGQIYLIYVPY 657
P QR F + AG+ YLH + + HRD+ +N L+ E + DF L ++
Sbjct: 104 EPDAQR--FFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161
Query: 658 TLFILSAKTKKTYYPNILKKASF 680
L T P +LK+ F
Sbjct: 162 RLLNKMCGTLPYVAPELLKRREF 184
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 74/161 (45%), Gaps = 30/161 (18%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLG-SHGLINN 546
LGQG FG VY E K +K+ + + + + + +
Sbjct: 20 LGQGSFGMVY--------------------EGVAKGVVKDEPETRVAIKTVNEAASMRER 59
Query: 547 LHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLK--------ELLQDPG- 597
+ ++ +V++ + H+V+R +GV+ + + ++ E + G LK E+ +P
Sbjct: 60 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 119
Query: 598 QPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
P + + A +IA GM YL++ +HRDL ++NC+V E
Sbjct: 120 APPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE 160
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 69/163 (42%), Gaps = 23/163 (14%)
Query: 474 SRIFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLI 533
R F D G LG+G FG VY ++ +M LK L++ E E
Sbjct: 8 KRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKE------------ 55
Query: 534 YLIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELL 593
G+ + L ++ + L H N++R + +++ L+ E+ G L + L
Sbjct: 56 --------GVEHQLR--REIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL 105
Query: 594 QDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
Q G+ + F ++A + Y H +IHRD+ +N L+
Sbjct: 106 QKHGR-FDEQRSATFMEELADALHYCHERKVIHRDIKPENLLM 147
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 69/163 (42%), Gaps = 23/163 (14%)
Query: 474 SRIFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLI 533
R F D G LG+G FG VY ++ +M LK L++ E E
Sbjct: 9 KRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKE------------ 56
Query: 534 YLIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELL 593
G+ + L ++ + L H N++R + +++ L+ E+ G L + L
Sbjct: 57 --------GVEHQLR--REIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL 106
Query: 594 QDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
Q G+ + F ++A + Y H +IHRD+ +N L+
Sbjct: 107 QKHGR-FDEQRSATFMEELADALHYCHERKVIHRDIKPENLLM 148
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 72/169 (42%), Gaps = 23/169 (13%)
Query: 473 KSRIFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGL 532
K R + D G LG+G FG VY +++ ++ LK L++
Sbjct: 1 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--------------- 45
Query: 533 IYLIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKEL 592
L G+ + L +V + L H N++R G + ++ L+ EY GT+
Sbjct: 46 -----LEKAGVEHQLR--REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRE 98
Query: 593 LQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS 641
LQ + + + ++A ++Y HS +IHRD+ +N L+ G
Sbjct: 99 LQKLSK-FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE 146
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 74/170 (43%), Gaps = 23/170 (13%)
Query: 471 ASKSRIFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQ 530
A SR + D G LG+G FG VY +++ ++ LK L++ E K
Sbjct: 2 AMGSRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLE---------KA 52
Query: 531 GLIYLIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLK 590
G+ + + +V + L H N++R G + ++ L+ EY GT+
Sbjct: 53 GVEHQLR-------------REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY 99
Query: 591 ELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
LQ + + + ++A ++Y HS +IHRD+ +N L+ G
Sbjct: 100 RELQKLSK-FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAG 148
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 88/203 (43%), Gaps = 31/203 (15%)
Query: 481 DLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGS 540
DLV+ LG+G +G+V +R T E + +K ++D+
Sbjct: 9 DLVQ--TLGEGAYGEVQLAVNRVTEEAVAVK-----------------------IVDM-K 42
Query: 541 HGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-DPGQP 599
+ + ++ + + L+H NV++F G + L EY +GG L + ++ D G P
Sbjct: 43 RAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMP 102
Query: 600 LPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS--GFDFHLGQIYLIYVPY 657
P QR F + AG+ YLH + + HRD+ +N L+ E + DF L ++
Sbjct: 103 EPDAQR--FFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 160
Query: 658 TLFILSAKTKKTYYPNILKKASF 680
L T P +LK+ F
Sbjct: 161 RLLNKMXGTLPYVAPELLKRREF 183
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 89/205 (43%), Gaps = 35/205 (17%)
Query: 481 DLVRGPLLGQGFFGQVYRVTHRETGEVMVLK--ELYRVDEEAEKNFLKESKQGLIYLIDL 538
DLV+ LG+G +G+V +R T E + +K ++ R + E N KE
Sbjct: 10 DLVQ--TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE-NIKKE----------- 55
Query: 539 GSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-DPG 597
+ + + L+H NV++F G + L EY +GG L + ++ D G
Sbjct: 56 --------------ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG 101
Query: 598 QPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS--GFDFHLGQIYLIYV 655
P P QR F + AG+ YLH + + HRD+ +N L+ E + DF L ++
Sbjct: 102 MPEPDAQR--FFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN 159
Query: 656 PYTLFILSAKTKKTYYPNILKKASF 680
L T P +LK+ F
Sbjct: 160 RERLLNKMCGTLPYVAPELLKRREF 184
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 88/203 (43%), Gaps = 31/203 (15%)
Query: 481 DLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGS 540
DLV+ LG+G +G+V +R T E + +K ++D+
Sbjct: 9 DLVQ--TLGEGAYGEVQLAVNRVTEEAVAVK-----------------------IVDM-K 42
Query: 541 HGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-DPGQP 599
+ + ++ + + L+H NV++F G + L EY +GG L + ++ D G P
Sbjct: 43 RAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMP 102
Query: 600 LPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS--GFDFHLGQIYLIYVPY 657
P QR F + AG+ YLH + + HRD+ +N L+ E + DF L ++
Sbjct: 103 EPDAQR--FFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 160
Query: 658 TLFILSAKTKKTYYPNILKKASF 680
L T P +LK+ F
Sbjct: 161 RLLNKMCGTLPYVAPELLKRREF 183
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 88/203 (43%), Gaps = 31/203 (15%)
Query: 481 DLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGS 540
DLV+ LG+G +G+V +R T E + +K ++D+
Sbjct: 9 DLVQ--TLGEGAYGEVQLAVNRVTEEAVAVK-----------------------IVDM-K 42
Query: 541 HGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-DPGQP 599
+ + ++ + + L+H NV++F G + L EY +GG L + ++ D G P
Sbjct: 43 RAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMP 102
Query: 600 LPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS--GFDFHLGQIYLIYVPY 657
P QR F + AG+ YLH + + HRD+ +N L+ E + DF L ++
Sbjct: 103 EPDAQR--FFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 160
Query: 658 TLFILSAKTKKTYYPNILKKASF 680
L T P +LK+ F
Sbjct: 161 RLLNKMXGTLPYVAPELLKRREF 183
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 88/203 (43%), Gaps = 31/203 (15%)
Query: 481 DLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGS 540
DLV+ LG+G +G+V +R T E + +K ++D+
Sbjct: 10 DLVQ--TLGEGAYGEVQLAVNRVTEEAVAVK-----------------------IVDM-K 43
Query: 541 HGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-DPGQP 599
+ + ++ + + L+H NV++F G + L EY +GG L + ++ D G P
Sbjct: 44 RAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMP 103
Query: 600 LPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS--GFDFHLGQIYLIYVPY 657
P QR F + AG+ YLH + + HRD+ +N L+ E + DF L ++
Sbjct: 104 EPDAQR--FFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161
Query: 658 TLFILSAKTKKTYYPNILKKASF 680
L T P +LK+ F
Sbjct: 162 RLLNKMXGTLPYVAPELLKRREF 184
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 27/160 (16%)
Query: 480 SDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLG 539
+D+ LG G +G+VY ++ + +K L E E+ FLKE+
Sbjct: 220 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEA----------- 267
Query: 540 SHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD-PGQ 598
AV++ + H N+++ +GV ++ ++TE++ G L + L++ Q
Sbjct: 268 --------------AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ 313
Query: 599 PLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
+ + A I++ M YL N IHR+L ++NCLV E
Sbjct: 314 EVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGE 353
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 89/205 (43%), Gaps = 35/205 (17%)
Query: 481 DLVRGPLLGQGFFGQVYRVTHRETGEVMVLK--ELYRVDEEAEKNFLKESKQGLIYLIDL 538
DLV+ LG+G +G+V +R T E + +K ++ R + E N KE
Sbjct: 9 DLVQ--TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE-NIKKE----------- 54
Query: 539 GSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-DPG 597
+ + + L+H NV++F G + L EY +GG L + ++ D G
Sbjct: 55 --------------ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG 100
Query: 598 QPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS--GFDFHLGQIYLIYV 655
P P QR F + AG+ YLH + + HRD+ +N L+ E + DF L ++
Sbjct: 101 MPEPDAQR--FFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN 158
Query: 656 PYTLFILSAKTKKTYYPNILKKASF 680
L T P +LK+ F
Sbjct: 159 RERLLNKMCGTLPYVAPELLKRREF 183
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 88/203 (43%), Gaps = 31/203 (15%)
Query: 481 DLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGS 540
DLV+ LG+G +G+V +R T E + +K ++D+
Sbjct: 8 DLVQ--TLGEGAYGEVQLAVNRVTEEAVAVK-----------------------IVDM-K 41
Query: 541 HGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-DPGQP 599
+ + ++ + + L+H NV++F G + L EY +GG L + ++ D G P
Sbjct: 42 RAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMP 101
Query: 600 LPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS--GFDFHLGQIYLIYVPY 657
P QR F + AG+ YLH + + HRD+ +N L+ E + DF L ++
Sbjct: 102 EPDAQR--FFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 159
Query: 658 TLFILSAKTKKTYYPNILKKASF 680
L T P +LK+ F
Sbjct: 160 RLLNKMCGTLPYVAPELLKRREF 182
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%)
Query: 552 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 611
+ +++ H NV+ GV+ + + + +V E++ G L L+ Q V R
Sbjct: 94 EASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRG 153
Query: 612 IAAGMTYLHSMNLIHRDLNSQNCLV 636
IAAGM YL M +HRDL ++N LV
Sbjct: 154 IAAGMRYLADMGYVHRDLAARNILV 178
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 88/203 (43%), Gaps = 31/203 (15%)
Query: 481 DLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGS 540
DLV+ LG+G +G+V +R T E + +K ++D+
Sbjct: 9 DLVQ--TLGEGAYGEVQLAVNRVTEEAVAVK-----------------------IVDM-K 42
Query: 541 HGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-DPGQP 599
+ + ++ + + L+H NV++F G + L EY +GG L + ++ D G P
Sbjct: 43 RAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMP 102
Query: 600 LPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS--GFDFHLGQIYLIYVPY 657
P QR F + AG+ YLH + + HRD+ +N L+ E + DF L ++
Sbjct: 103 EPDAQR--FFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 160
Query: 658 TLFILSAKTKKTYYPNILKKASF 680
L T P +LK+ F
Sbjct: 161 RLLNKMCGTLPYVAPELLKRREF 183
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 80/173 (46%), Gaps = 33/173 (19%)
Query: 482 LVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSH 541
LV G LG+G FGQV VL E +D++ + +K + L +
Sbjct: 71 LVLGKPLGEGAFGQV------------VLAEAIGLDKDKPN---RVTKVAVKMLKSDATE 115
Query: 542 GLINNLHCFSQVAVLRSL-HHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ------ 594
+++L S++ +++ + H N+I +G +D L ++ EY + G L+E LQ
Sbjct: 116 KDLSDL--ISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPG 173
Query: 595 ---------DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
+P + L V+ A +A GM YL S IHRDL ++N LV E
Sbjct: 174 LEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTE 226
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 73/168 (43%), Gaps = 23/168 (13%)
Query: 473 KSRIFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGL 532
K R + D G LG+G FG VY +++ ++ LK L++ E K G+
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLE---------KAGV 52
Query: 533 IYLIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKEL 592
+ + +V + L H N++R G + ++ L+ EY GT+
Sbjct: 53 EHQLR-------------REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRE 99
Query: 593 LQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
LQ + + + ++A ++Y HS +IHRD+ +N L+ G
Sbjct: 100 LQKLSK-FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAG 146
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
Query: 547 LHCF-SQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQR 605
L F ++V VLR H N++ F+G +L +VT++ G +L L +
Sbjct: 64 LQAFKNEVGVLRKTRHVNILLFMGYSTAP-QLAIVTQWCEGSSLYHHLHASETKFEMKKL 122
Query: 606 VNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
++ AR A GM YLH+ ++IHRDL S N + E
Sbjct: 123 IDIARQTARGMDYLHAKSIIHRDLKSNNIFLHE 155
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 80/182 (43%), Gaps = 28/182 (15%)
Query: 461 RTRSRSFRVEASKSRIFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEA 520
R R +F + K + D + LG G G V++V+H+ +G VM K
Sbjct: 49 RKRLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARK--------- 99
Query: 521 EKNFLKESKQGLIYLIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLV 580
LI L I N ++ VL + ++ F G Y D ++++
Sbjct: 100 --------------LIHLEIKPAIRN-QIIRELQVLHECNSPYIVGFYGAFYSDGEISIC 144
Query: 581 TEYIAGGTLKELLQDPGQ-PLPWGQRVNFARDIAAGMTYLHSMN-LIHRDLNSQNCLVRE 638
E++ GG+L ++L+ G+ P +V+ A + G+TYL + ++HRD+ N LV
Sbjct: 145 MEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREKHKIMHRDVKPSNILVNS 202
Query: 639 VG 640
G
Sbjct: 203 RG 204
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 88/203 (43%), Gaps = 31/203 (15%)
Query: 481 DLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGS 540
DLV+ LG+G +G+V +R T E + +K ++D+
Sbjct: 9 DLVQ--TLGEGAYGEVQLAVNRVTEEAVAVK-----------------------IVDM-K 42
Query: 541 HGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-DPGQP 599
+ + ++ + + L+H NV++F G + L EY +GG L + ++ D G P
Sbjct: 43 RAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMP 102
Query: 600 LPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS--GFDFHLGQIYLIYVPY 657
P QR F + AG+ YLH + + HRD+ +N L+ E + DF L ++
Sbjct: 103 EPDAQR--FFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 160
Query: 658 TLFILSAKTKKTYYPNILKKASF 680
L T P +LK+ F
Sbjct: 161 RLLNKMCGTLPYVAPELLKRREF 183
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 2/95 (2%)
Query: 545 NNLHCF-SQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWG 603
L F ++V VLR H N++ F+G K +L +VT++ G +L L
Sbjct: 51 QQLQAFKNEVGVLRKTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMI 109
Query: 604 QRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
+ ++ AR A GM YLH+ ++IHRDL S N + E
Sbjct: 110 KLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHE 144
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 88/203 (43%), Gaps = 31/203 (15%)
Query: 481 DLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGS 540
DLV+ LG+G +G+V +R T E + +K ++D+
Sbjct: 10 DLVQ--TLGEGAYGEVQLAVNRVTEEAVAVK-----------------------IVDM-K 43
Query: 541 HGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-DPGQP 599
+ + ++ + + L+H NV++F G + L EY +GG L + ++ D G P
Sbjct: 44 RAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMP 103
Query: 600 LPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS--GFDFHLGQIYLIYVPY 657
P QR F + AG+ YLH + + HRD+ +N L+ E + DF L ++
Sbjct: 104 EPDAQR--FFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161
Query: 658 TLFILSAKTKKTYYPNILKKASF 680
L T P +LK+ F
Sbjct: 162 RLLNKMCGTLPYVAPELLKRREF 184
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 88/203 (43%), Gaps = 31/203 (15%)
Query: 481 DLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGS 540
DLV+ LG+G +G+V +R T E + +K ++D+
Sbjct: 9 DLVQ--TLGEGAYGEVQLAVNRVTEEAVAVK-----------------------IVDM-K 42
Query: 541 HGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-DPGQP 599
+ + ++ + + L+H NV++F G + L EY +GG L + ++ D G P
Sbjct: 43 RAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMP 102
Query: 600 LPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS--GFDFHLGQIYLIYVPY 657
P QR F + AG+ YLH + + HRD+ +N L+ E + DF L ++
Sbjct: 103 EPDAQR--FFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 160
Query: 658 TLFILSAKTKKTYYPNILKKASF 680
L T P +LK+ F
Sbjct: 161 RLLNKMXGTLPYVAPELLKRREF 183
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 78/164 (47%), Gaps = 21/164 (12%)
Query: 474 SRIFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLI 533
+RIF+ ++L + +LG G FG V++ GE + + +V E+ K +Q
Sbjct: 7 ARIFKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIED------KSGRQSFQ 60
Query: 534 YLIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELL 593
+ D + + SL H +++R +G L L LVT+Y+ G+L + +
Sbjct: 61 AVTD--------------HMLAIGSLDHAHIVRLLG-LCPGSSLQLVTQYLPLGSLLDHV 105
Query: 594 QDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVR 637
+ L +N+ IA GM YL ++HR+L ++N L++
Sbjct: 106 RQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLK 149
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 89/205 (43%), Gaps = 35/205 (17%)
Query: 481 DLVRGPLLGQGFFGQVYRVTHRETGEVMVLK--ELYRVDEEAEKNFLKESKQGLIYLIDL 538
DLV+ LG+G +G+V +R T E + +K ++ R + E N KE
Sbjct: 9 DLVQ--TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE-NIKKE----------- 54
Query: 539 GSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-DPG 597
+ + + L+H NV++F G + L EY +GG L + ++ D G
Sbjct: 55 --------------ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG 100
Query: 598 QPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS--GFDFHLGQIYLIYV 655
P P QR F + AG+ YLH + + HRD+ +N L+ E + DF L ++
Sbjct: 101 MPEPDAQR--FFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN 158
Query: 656 PYTLFILSAKTKKTYYPNILKKASF 680
L T P +LK+ F
Sbjct: 159 RERLLNKMCGTLPYVAPELLKRREF 183
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 2/95 (2%)
Query: 545 NNLHCF-SQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWG 603
L F ++V VLR H N++ F+G K +L +VT++ G +L L
Sbjct: 46 QQLQAFKNEVGVLRKTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMI 104
Query: 604 QRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
+ ++ AR A GM YLH+ ++IHRDL S N + E
Sbjct: 105 KLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHE 139
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 2/95 (2%)
Query: 545 NNLHCF-SQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWG 603
L F ++V VLR H N++ F+G K +L +VT++ G +L L
Sbjct: 48 QQLQAFKNEVGVLRKTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMI 106
Query: 604 QRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
+ ++ AR A GM YLH+ ++IHRDL S N + E
Sbjct: 107 KLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHE 141
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 2/95 (2%)
Query: 545 NNLHCF-SQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWG 603
L F ++V VLR H N++ F+G K +L +VT++ G +L L
Sbjct: 46 QQLQAFKNEVGVLRKTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMI 104
Query: 604 QRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
+ ++ AR A GM YLH+ ++IHRDL S N + E
Sbjct: 105 KLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHE 139
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 83/196 (42%), Gaps = 42/196 (21%)
Query: 487 LLGQ-GFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLIN 545
++G+ G FG+VY+ ++ET + K + EE ++++ E
Sbjct: 16 IIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVE------------------ 57
Query: 546 NLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQR 605
+ +L S H N+++ + Y + L ++ E+ AGG + ++ + +PL Q
Sbjct: 58 -------IDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQI 110
Query: 606 VNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGSGFDFHLGQIYLIYVPYTLFILSAK 665
+ + YLH +IHRDL + N L G D L F +SAK
Sbjct: 111 QVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDG---DIKLAD----------FGVSAK 157
Query: 666 TKKTYYPNILKKASFI 681
+T I ++ SFI
Sbjct: 158 NTRT---XIQRRDSFI 170
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 88/203 (43%), Gaps = 31/203 (15%)
Query: 481 DLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGS 540
DLV+ LG+G +G+V +R T E + +K ++D+
Sbjct: 9 DLVQ--TLGEGAYGEVQLAVNRVTEEAVAVK-----------------------IVDM-K 42
Query: 541 HGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-DPGQP 599
+ + ++ + + L+H NV++F G + L EY +GG L + ++ D G P
Sbjct: 43 RAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMP 102
Query: 600 LPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS--GFDFHLGQIYLIYVPY 657
P QR F + AG+ YLH + + HRD+ +N L+ E + DF L ++
Sbjct: 103 EPDAQR--FFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 160
Query: 658 TLFILSAKTKKTYYPNILKKASF 680
L T P +LK+ F
Sbjct: 161 RLLNKMCGTLPYVAPELLKRREF 183
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 2/95 (2%)
Query: 545 NNLHCF-SQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWG 603
L F ++V VLR H N++ F+G K +L +VT++ G +L L
Sbjct: 51 QQLQAFKNEVGVLRKTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMI 109
Query: 604 QRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
+ ++ AR A GM YLH+ ++IHRDL S N + E
Sbjct: 110 KLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHE 144
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 2/95 (2%)
Query: 545 NNLHCF-SQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWG 603
L F ++V VLR H N++ F+G K +L +VT++ G +L L
Sbjct: 74 QQLQAFKNEVGVLRKTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMI 132
Query: 604 QRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
+ ++ AR A GM YLH+ ++IHRDL S N + E
Sbjct: 133 KLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHE 167
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 88/203 (43%), Gaps = 31/203 (15%)
Query: 481 DLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGS 540
DLV+ LG+G +G+V +R T E + +K ++D+
Sbjct: 9 DLVQ--TLGEGAYGEVQLAVNRVTEEAVAVK-----------------------IVDM-K 42
Query: 541 HGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-DPGQP 599
+ + ++ + + L+H NV++F G + L EY +GG L + ++ D G P
Sbjct: 43 RAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMP 102
Query: 600 LPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS--GFDFHLGQIYLIYVPY 657
P QR F + AG+ YLH + + HRD+ +N L+ E + DF L ++
Sbjct: 103 EPDAQR--FFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 160
Query: 658 TLFILSAKTKKTYYPNILKKASF 680
L T P +LK+ F
Sbjct: 161 RLLNKMCGTLPYVAPELLKRREF 183
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 74/161 (45%), Gaps = 30/161 (18%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLG-SHGLINN 546
LGQG FG VY E K +K+ + + + + + +
Sbjct: 55 LGQGSFGMVY--------------------EGVAKGVVKDEPETRVAIKTVNEAASMRER 94
Query: 547 LHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLK--------ELLQDPG- 597
+ ++ +V++ + H+V+R +GV+ + + ++ E + G LK E+ +P
Sbjct: 95 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 154
Query: 598 QPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
P + + A +IA GM YL++ +HRDL ++NC+V E
Sbjct: 155 APPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE 195
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 2/95 (2%)
Query: 545 NNLHCF-SQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWG 603
L F ++V VLR H N++ F+G K +L +VT++ G +L L
Sbjct: 66 QQLQAFKNEVGVLRKTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMI 124
Query: 604 QRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
+ ++ AR A GM YLH+ ++IHRDL S N + E
Sbjct: 125 KLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHE 159
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 63/133 (47%), Gaps = 5/133 (3%)
Query: 551 SQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-DPGQPLPWGQRVNFA 609
++ + + L+H NV++F G + L EY +GG L + ++ D G P P QR F
Sbjct: 53 KEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR--FF 110
Query: 610 RDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS--GFDFHLGQIYLIYVPYTLFILSAKTK 667
+ AG+ YLH + + HRD+ +N L+ E + DF L ++ L T
Sbjct: 111 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 170
Query: 668 KTYYPNILKKASF 680
P +LK+ F
Sbjct: 171 PYVAPELLKRREF 183
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 89/205 (43%), Gaps = 35/205 (17%)
Query: 481 DLVRGPLLGQGFFGQVYRVTHRETGEVMVLK--ELYRVDEEAEKNFLKESKQGLIYLIDL 538
DLV+ LG+G +G+V +R T E + +K ++ R + E N KE
Sbjct: 10 DLVQ--TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE-NIKKE----------- 55
Query: 539 GSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-DPG 597
+ + + L+H NV++F G + L EY +GG L + ++ D G
Sbjct: 56 --------------ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG 101
Query: 598 QPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS--GFDFHLGQIYLIYV 655
P P QR F + AG+ YLH + + HRD+ +N L+ E + DF L ++
Sbjct: 102 MPEPDAQR--FFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN 159
Query: 656 PYTLFILSAKTKKTYYPNILKKASF 680
L T P +LK+ F
Sbjct: 160 RERLLNKMCGTLPYVAPELLKRREF 184
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 71/155 (45%), Gaps = 18/155 (11%)
Query: 498 RVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYL-IDLGSHGLI------------ 544
R T E +L+ Y DE ++ L + G++Y DL + I
Sbjct: 3 RSTEEGDCESDLLEYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRY 62
Query: 545 -NNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWG 603
LH ++A+ + L H N+++++G ++ + + E + GG+L LL+ PL
Sbjct: 63 SQPLH--EEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDN 120
Query: 604 QRV--NFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
++ + + I G+ YLH ++HRD+ N L+
Sbjct: 121 EQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLI 155
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 88/203 (43%), Gaps = 31/203 (15%)
Query: 481 DLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGS 540
DLV+ LG+G +G+V +R T E + +K ++D+
Sbjct: 9 DLVQ--TLGEGAYGEVQLAVNRVTEEAVAVK-----------------------IVDM-K 42
Query: 541 HGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-DPGQP 599
+ + ++ + + L+H NV++F G + L EY +GG L + ++ D G P
Sbjct: 43 RAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMP 102
Query: 600 LPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS--GFDFHLGQIYLIYVPY 657
P QR F + AG+ YLH + + HRD+ +N L+ E + DF L ++
Sbjct: 103 EPDAQR--FFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 160
Query: 658 TLFILSAKTKKTYYPNILKKASF 680
L T P +LK+ F
Sbjct: 161 RLLNKMXGTLPYVAPELLKRREF 183
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 73/168 (43%), Gaps = 23/168 (13%)
Query: 474 SRIFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLI 533
SR + D G LG+G FG VY +++ ++ LK L++ E K G+
Sbjct: 5 SRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLE---------KAGV- 54
Query: 534 YLIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELL 593
H L +V + L H N++R G + ++ L+ EY GT+ L
Sbjct: 55 ------EHQLRR------EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL 102
Query: 594 QDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS 641
Q + + + ++A ++Y HS +IHRD+ +N L+ G
Sbjct: 103 QKLSK-FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE 149
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 78/164 (47%), Gaps = 21/164 (12%)
Query: 474 SRIFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLI 533
+RIF+ ++L + +LG G FG V++ GE + + +V E+ K +Q
Sbjct: 25 ARIFKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIED------KSGRQSFQ 78
Query: 534 YLIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELL 593
+ D + + SL H +++R +G L L LVT+Y+ G+L + +
Sbjct: 79 AVTD--------------HMLAIGSLDHAHIVRLLG-LCPGSSLQLVTQYLPLGSLLDHV 123
Query: 594 QDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVR 637
+ L +N+ IA GM YL ++HR+L ++N L++
Sbjct: 124 RQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLK 167
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 2/95 (2%)
Query: 545 NNLHCF-SQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWG 603
L F ++V VLR H N++ F+G K +L +VT++ G +L L
Sbjct: 73 QQLQAFKNEVGVLRKTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMI 131
Query: 604 QRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
+ ++ AR A GM YLH+ ++IHRDL S N + E
Sbjct: 132 KLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHE 166
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 2/95 (2%)
Query: 545 NNLHCF-SQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWG 603
L F ++V VLR H N++ F+G K +L +VT++ G +L L
Sbjct: 74 QQLQAFKNEVGVLRKTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMI 132
Query: 604 QRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
+ ++ AR A GM YLH+ ++IHRDL S N + E
Sbjct: 133 KLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHE 167
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 52/93 (55%), Gaps = 2/93 (2%)
Query: 550 FSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP-GQPLPWGQRVNF 608
++ +++ L H ++R V+ ++ + ++TEY+ G+L + L+ P G L + ++
Sbjct: 51 LAEANLMKQLQHQRLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDM 109
Query: 609 ARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS 641
A IA GM ++ N IHRDL + N LV + S
Sbjct: 110 AAQIAEGMAFIEERNYIHRDLRAANILVSDTLS 142
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 80/182 (43%), Gaps = 28/182 (15%)
Query: 461 RTRSRSFRVEASKSRIFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEA 520
R R +F + K + D + LG G G V++V+H+ +G VM K
Sbjct: 14 RKRLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARK--------- 64
Query: 521 EKNFLKESKQGLIYLIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLV 580
LI L I N ++ VL + ++ F G Y D ++++
Sbjct: 65 --------------LIHLEIKPAIRN-QIIRELQVLHECNSPYIVGFYGAFYSDGEISIC 109
Query: 581 TEYIAGGTLKELLQDPGQ-PLPWGQRVNFARDIAAGMTYLHSMN-LIHRDLNSQNCLVRE 638
E++ GG+L ++L+ G+ P +V+ A + G+TYL + ++HRD+ N LV
Sbjct: 110 MEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREKHKIMHRDVKPSNILVNS 167
Query: 639 VG 640
G
Sbjct: 168 RG 169
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 52/93 (55%), Gaps = 2/93 (2%)
Query: 550 FSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP-GQPLPWGQRVNF 608
++ +++ L H ++R V+ ++ + ++TEY+ G+L + L+ P G L + ++
Sbjct: 56 LAEANLMKQLQHQRLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDM 114
Query: 609 ARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS 641
A IA GM ++ N IHRDL + N LV + S
Sbjct: 115 AAQIAEGMAFIEERNYIHRDLRAANILVSDTLS 147
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 52/93 (55%), Gaps = 2/93 (2%)
Query: 550 FSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP-GQPLPWGQRVNF 608
++ +++ L H ++R V+ ++ + ++TEY+ G+L + L+ P G L + ++
Sbjct: 61 LAEANLMKQLQHQRLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDM 119
Query: 609 ARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS 641
A IA GM ++ N IHRDL + N LV + S
Sbjct: 120 AAQIAEGMAFIEERNYIHRDLRAANILVSDTLS 152
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 52/93 (55%), Gaps = 2/93 (2%)
Query: 550 FSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP-GQPLPWGQRVNF 608
++ +++ L H ++R V+ ++ + ++TEY+ G+L + L+ P G L + ++
Sbjct: 57 LAEANLMKQLQHQRLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDM 115
Query: 609 ARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS 641
A IA GM ++ N IHRDL + N LV + S
Sbjct: 116 AAQIAEGMAFIEERNYIHRDLRAANILVSDTLS 148
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 52/93 (55%), Gaps = 2/93 (2%)
Query: 550 FSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP-GQPLPWGQRVNF 608
++ +++ L H ++R V+ ++ + ++TEY+ G+L + L+ P G L + ++
Sbjct: 62 LAEANLMKQLQHQRLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDM 120
Query: 609 ARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS 641
A IA GM ++ N IHRDL + N LV + S
Sbjct: 121 AAQIAEGMAFIEERNYIHRDLRAANILVSDTLS 153
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 81/170 (47%), Gaps = 27/170 (15%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
+G+G +G VY+ + G ++ LK + R+D E E G+ +
Sbjct: 29 VGEGTYGVVYKAKDSQ-GRIVALKRI-RLDAEDE--------------------GIPST- 65
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
++++L+ LHH N++ I V++ +R L LV E++ LK++L + L Q
Sbjct: 66 -AIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFME-KDLKKVLDENKTGLQDSQIKI 123
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS--GFDFHLGQIYLIYV 655
+ + G+ + H ++HRDL QN L+ G+ DF L + + I V
Sbjct: 124 YLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPV 173
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 52/93 (55%), Gaps = 2/93 (2%)
Query: 550 FSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP-GQPLPWGQRVNF 608
++ +++ L H ++R V+ ++ + ++TEY+ G+L + L+ P G L + ++
Sbjct: 56 LAEANLMKQLQHQRLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDM 114
Query: 609 ARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS 641
A IA GM ++ N IHRDL + N LV + S
Sbjct: 115 AAQIAEGMAFIEERNYIHRDLRAANILVSDTLS 147
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 52/93 (55%), Gaps = 2/93 (2%)
Query: 550 FSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP-GQPLPWGQRVNF 608
++ +++ L H ++R V+ ++ + ++TEY+ G+L + L+ P G L + ++
Sbjct: 58 LAEANLMKQLQHQRLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDM 116
Query: 609 ARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS 641
A IA GM ++ N IHRDL + N LV + S
Sbjct: 117 AAQIAEGMAFIEERNYIHRDLRAANILVSDTLS 149
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 52/93 (55%), Gaps = 2/93 (2%)
Query: 550 FSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP-GQPLPWGQRVNF 608
++ +++ L H ++R V+ ++ + ++TEY+ G+L + L+ P G L + ++
Sbjct: 56 LAEANLMKQLQHQRLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDM 114
Query: 609 ARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS 641
A IA GM ++ N IHRDL + N LV + S
Sbjct: 115 AAQIAEGMAFIEERNYIHRDLRAANILVSDTLS 147
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 67/160 (41%), Gaps = 23/160 (14%)
Query: 474 SRIFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLI 533
+R F D G LG+G FG VY +++ ++ LK L++ E E
Sbjct: 17 TRHFTIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKE------------ 64
Query: 534 YLIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELL 593
G+ + L ++ + LHH N++R Y R++ L+ EY G L + L
Sbjct: 65 --------GVEHQLR--REIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKEL 114
Query: 594 QDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQN 633
Q + ++A + Y H +IHRD+ +N
Sbjct: 115 QKSCT-FDEQRTATIMEELADALMYCHGKKVIHRDIKPEN 153
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 81/170 (47%), Gaps = 27/170 (15%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
+G+G +G VY+ + G ++ LK + R+D E E G+ +
Sbjct: 29 VGEGTYGVVYKAKDSQ-GRIVALKRI-RLDAEDE--------------------GIPST- 65
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
++++L+ LHH N++ I V++ +R L LV E++ LK++L + L Q
Sbjct: 66 -AIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFME-KDLKKVLDENKTGLQDSQIKI 123
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS--GFDFHLGQIYLIYV 655
+ + G+ + H ++HRDL QN L+ G+ DF L + + I V
Sbjct: 124 YLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPV 173
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 52/93 (55%), Gaps = 2/93 (2%)
Query: 550 FSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP-GQPLPWGQRVNF 608
++ +++ L H ++R V+ ++ + ++TEY+ G+L + L+ P G L + ++
Sbjct: 56 LAEANLMKQLQHQRLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDM 114
Query: 609 ARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS 641
A IA GM ++ N IHRDL + N LV + S
Sbjct: 115 AAQIAEGMAFIEERNYIHRDLRAANILVSDTLS 147
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 52/93 (55%), Gaps = 2/93 (2%)
Query: 550 FSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP-GQPLPWGQRVNF 608
++ +++ L H ++R V+ ++ + ++TEY+ G+L + L+ P G L + ++
Sbjct: 65 LAEANLMKQLQHQRLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDM 123
Query: 609 ARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS 641
A IA GM ++ N IHRDL + N LV + S
Sbjct: 124 AAQIAEGMAFIEERNYIHRDLRAANILVSDTLS 156
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 52/93 (55%), Gaps = 2/93 (2%)
Query: 550 FSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP-GQPLPWGQRVNF 608
++ +++ L H ++R V+ ++ + ++TEY+ G+L + L+ P G L + ++
Sbjct: 62 LAEANLMKQLQHQRLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDM 120
Query: 609 ARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS 641
A IA GM ++ N IHRDL + N LV + S
Sbjct: 121 AAQIAEGMAFIEERNYIHRDLRAANILVSDTLS 153
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 65/154 (42%), Gaps = 26/154 (16%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
+G+G FG+V++ T +V+ +K +IDL
Sbjct: 31 IGKGSFGEVFKGIDNRTQQVVAIK-----------------------IIDLEEAEDEIED 67
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
++ VL V ++ G K KL ++ EY+ GG+ +LL+ P Q
Sbjct: 68 IQ-QEITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLR--AGPFDEFQIAT 124
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS 641
++I G+ YLHS IHRD+ + N L+ E G
Sbjct: 125 MLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGD 158
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 69/163 (42%), Gaps = 24/163 (14%)
Query: 478 RASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLID 537
+A D ++G+G FG+V V H+ T +V +K L + + +K S +
Sbjct: 67 KAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFE------MIKRSDSAFFW--- 117
Query: 538 LGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPG 597
+ ++ + V++ DR L +V EY+ GG L L+ +
Sbjct: 118 -------------EERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD 164
Query: 598 QPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
P W + + ++ + +HSM IHRD+ N L+ + G
Sbjct: 165 VPEKWARF--YTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSG 205
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 73/161 (45%), Gaps = 30/161 (18%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLG-SHGLINN 546
LGQG FG VY E K +K+ + + + + + +
Sbjct: 20 LGQGSFGMVY--------------------EGVAKGVVKDEPETRVAIKTVNEAASMRER 59
Query: 547 LHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLK--------ELLQDPG- 597
+ ++ +V++ + H+V+R +GV+ + + ++ E + G LK E+ +P
Sbjct: 60 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 119
Query: 598 QPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
P + + A +IA GM YL++ +HRDL ++NC V E
Sbjct: 120 APPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCXVAE 160
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 73/172 (42%), Gaps = 32/172 (18%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LG G FG V+ V R +G V+K + K+ Q + I+
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTIN-----------KDRSQVPMEQIE---------- 68
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELL---QDPGQPLPWGQ 604
+++ VL+SL H N+I+ V + +V E GG L E + Q G+ L G
Sbjct: 69 ---AEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGY 125
Query: 605 RVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGSG-----FDFHLGQIY 651
+ + + Y HS +++H+DL +N L ++ DF L +++
Sbjct: 126 VAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELF 177
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 52/93 (55%), Gaps = 2/93 (2%)
Query: 550 FSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP-GQPLPWGQRVNF 608
++ +++ L H ++R V+ ++ + ++TEY+ G+L + L+ P G L + ++
Sbjct: 64 LAEANLMKQLQHQRLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDM 122
Query: 609 ARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS 641
A IA GM ++ N IHRDL + N LV + S
Sbjct: 123 AAQIAEGMAFIEERNYIHRDLRAANILVSDTLS 155
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 69/163 (42%), Gaps = 24/163 (14%)
Query: 478 RASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLID 537
+A D ++G+G FG+V V H+ T +V +K L + + +K S +
Sbjct: 72 KAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFE------MIKRSDSAFFW--- 122
Query: 538 LGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPG 597
+ ++ + V++ DR L +V EY+ GG L L+ +
Sbjct: 123 -------------EERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD 169
Query: 598 QPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
P W + + ++ + +HSM IHRD+ N L+ + G
Sbjct: 170 VPEKWARF--YTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSG 210
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 70/151 (46%), Gaps = 29/151 (19%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LG+G +G+VY+ T E + +K + R++ E E G G
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRI-RLEHEEE-----------------GVPGT---- 79
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRV- 606
+V++L+ L H N+I V++ + +L+L+ EY K + ++P + RV
Sbjct: 80 -AIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAENDLKKYMDKNPDVSM----RVI 134
Query: 607 -NFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
+F + G+ + HS +HRDL QN L+
Sbjct: 135 KSFLYQLINGVNFCHSRRCLHRDLKPQNLLL 165
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 52/93 (55%), Gaps = 2/93 (2%)
Query: 550 FSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP-GQPLPWGQRVNF 608
++ +++ L H ++R V+ ++ + ++TEY+ G+L + L+ P G L + ++
Sbjct: 66 LAEANLMKQLQHQRLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDM 124
Query: 609 ARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS 641
A IA GM ++ N IHRDL + N LV + S
Sbjct: 125 AAQIAEGMAFIEERNYIHRDLRAANILVSDTLS 157
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 65/154 (42%), Gaps = 25/154 (16%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LG+G + VY+ + T ++ LKE+ EE
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAP------------------------C 45
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
+V++L+ L H N++ +++ ++ L LV EY+ LK+ L D G +
Sbjct: 46 TAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYL-DKDLKQYLDDCGNIINMHNVKL 104
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS 641
F + G+ Y H ++HRDL QN L+ E G
Sbjct: 105 FLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGE 138
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 66/157 (42%), Gaps = 28/157 (17%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LG G + VY+ ++ TG + LKE+ EE +
Sbjct: 13 LGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPST----------------------- 49
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
++++++ L H N++R V++ + KL LV E++ K + P G +N
Sbjct: 50 -AIREISLMKELKHENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELN 108
Query: 608 ----FARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
F + G+ + H ++HRDL QN L+ + G
Sbjct: 109 LVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRG 145
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 71/153 (46%), Gaps = 23/153 (15%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LG G FG+V V H+E+G +K L KQ ++ L +
Sbjct: 36 LGTGSFGRVMLVKHKESGNHYAMKIL--------------DKQKVVKLKQIE-------- 73
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
H ++ +L++++ +++ + L +V EY+AGG + L+ G+ R
Sbjct: 74 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF- 132
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
+A I YLHS++LI+RDL +N L+ E G
Sbjct: 133 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDEQG 165
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 69/163 (42%), Gaps = 24/163 (14%)
Query: 478 RASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLID 537
+A D ++G+G FG+V V H+ T +V +K L + + +K S +
Sbjct: 72 KAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFE------MIKRSDSAFFW--- 122
Query: 538 LGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPG 597
+ ++ + V++ DR L +V EY+ GG L L+ +
Sbjct: 123 -------------EERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD 169
Query: 598 QPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
P W + + ++ + +HSM IHRD+ N L+ + G
Sbjct: 170 VPEKWARF--YTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSG 210
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 81/182 (44%), Gaps = 28/182 (15%)
Query: 461 RTRSRSFRVEASKSRIFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEA 520
R R +F + K + D + LG G G V++V+H+ +G VM K ++ + A
Sbjct: 6 RKRLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPA 65
Query: 521 EKNFLKESKQGLIYLIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLV 580
+N ++ VL + ++ F G Y D ++++
Sbjct: 66 IRN------------------------QIIRELQVLHECNSPYIVGFYGAFYSDGEISIC 101
Query: 581 TEYIAGGTLKELLQDPGQ-PLPWGQRVNFARDIAAGMTYLHSMN-LIHRDLNSQNCLVRE 638
E++ GG+L ++L+ G+ P +V+ A + G+TYL + ++HRD+ N LV
Sbjct: 102 MEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREKHKIMHRDVKPSNILVNS 159
Query: 639 VG 640
G
Sbjct: 160 RG 161
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 72/166 (43%), Gaps = 23/166 (13%)
Query: 475 RIFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIY 534
R + D G LG+G FG VY +++ ++ LK L++ E K G+ +
Sbjct: 3 RQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLE---------KAGVEH 53
Query: 535 LIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ 594
+ +V + L H N++R G + ++ L+ EY GT+ LQ
Sbjct: 54 QLR-------------REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ 100
Query: 595 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
+ + + ++A ++Y HS +IHRD+ +N L+ G
Sbjct: 101 KLSK-FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAG 145
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 72/166 (43%), Gaps = 23/166 (13%)
Query: 475 RIFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIY 534
R + D G LG+G FG VY +++ ++ LK L++ E K G+ +
Sbjct: 3 RQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLE---------KAGVEH 53
Query: 535 LIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ 594
+ +V + L H N++R G + ++ L+ EY GT+ LQ
Sbjct: 54 QLR-------------REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ 100
Query: 595 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
+ + + ++A ++Y HS +IHRD+ +N L+ G
Sbjct: 101 KLSK-FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAG 145
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 88/203 (43%), Gaps = 31/203 (15%)
Query: 481 DLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGS 540
DLV+ LG+G +G+V +R T E + +K + + K+ + ++
Sbjct: 10 DLVQ--TLGEGAYGEVQLAVNRVTEEAVAVK-------------IVDMKRAVDCPENIKK 54
Query: 541 HGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-DPGQP 599
IN + L+H NV++F G + L EY +GG L + ++ D G P
Sbjct: 55 EICINAM-----------LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMP 103
Query: 600 LPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS--GFDFHLGQIYLIYVPY 657
P QR F + AG+ YLH + + HRD+ +N L+ E + DF L ++
Sbjct: 104 EPDAQR--FFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161
Query: 658 TLFILSAKTKKTYYPNILKKASF 680
L T P +LK+ F
Sbjct: 162 RLLNKMCGTLPYVAPELLKRREF 184
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 68/153 (44%), Gaps = 23/153 (15%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
+G G FG VY EV+ +K++ +++ + + Q +I
Sbjct: 62 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKW-----QDII-------------- 102
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
+V L+ L H N I++ G ++ LV EY G + +LL+ +PL +
Sbjct: 103 ---KEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAA 158
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
G+ YLHS N+IHRD+ + N L+ E G
Sbjct: 159 VTHGALQGLAYLHSHNMIHRDVKAGNILLSEPG 191
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 80/178 (44%), Gaps = 33/178 (18%)
Query: 477 FRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLI 536
F L G LG+G FGQV V+ E +D++ K + + + L
Sbjct: 19 FPRDKLTLGKPLGEGCFGQV------------VMAEAVGIDKDKPKEAVTVAVK---MLK 63
Query: 537 DLGSHGLINNLHCFSQVAVLRSL-HHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD 595
D + +++L S++ +++ + H N+I +G +D L ++ EY + G L+E L+
Sbjct: 64 DDATEKDLSDL--VSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRA 121
Query: 596 ---------------PGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
P + + + V+ +A GM YL S IHRDL ++N LV E
Sbjct: 122 RRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLVTE 179
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 85/191 (44%), Gaps = 35/191 (18%)
Query: 477 FRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLI 536
F L G LG+G FGQV V+ E +D++ K + + + L
Sbjct: 78 FPRDKLTLGKPLGEGCFGQV------------VMAEAVGIDKDKPKEAVTVAVK---MLK 122
Query: 537 DLGSHGLINNLHCFSQVAVLRSL-HHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD 595
D + +++L S++ +++ + H N+I +G +D L ++ EY + G L+E L+
Sbjct: 123 DDATEKDLSDL--VSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRA 180
Query: 596 ---------------PGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE-- 638
P + + + V+ +A GM YL S IHRDL ++N LV E
Sbjct: 181 RRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENN 240
Query: 639 VGSGFDFHLGQ 649
V DF L +
Sbjct: 241 VMKIADFGLAR 251
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 71/166 (42%), Gaps = 23/166 (13%)
Query: 475 RIFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIY 534
R + D G LG+G FG VY +++ ++ LK L++
Sbjct: 3 RQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ----------------- 45
Query: 535 LIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ 594
L G+ + L +V + L H N++R G + ++ L+ EY GT+ LQ
Sbjct: 46 ---LEKAGVEHQLR--REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ 100
Query: 595 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
+ + + ++A ++Y HS +IHRD+ +N L+ G
Sbjct: 101 KLSK-FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAG 145
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 67/153 (43%), Gaps = 23/153 (15%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
+G G FG VY EV+ +K++ +++ + + Q +I
Sbjct: 23 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKW-----QDII-------------- 63
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
+V L+ L H N I++ G ++ LV EY G +LL+ +PL +
Sbjct: 64 ---KEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSA-SDLLEVHKKPLQEVEIAA 119
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
G+ YLHS N+IHRD+ + N L+ E G
Sbjct: 120 VTHGALQGLAYLHSHNMIHRDVKAGNILLSEPG 152
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 80/178 (44%), Gaps = 33/178 (18%)
Query: 477 FRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLI 536
F L G LG+G FGQV V+ E +D++ K + + + L
Sbjct: 32 FPRDKLTLGKPLGEGAFGQV------------VMAEAVGIDKDKPKEAVTVAVK---MLK 76
Query: 537 DLGSHGLINNLHCFSQVAVLRSL-HHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD 595
D + +++L S++ +++ + H N+I +G +D L ++ EY + G L+E L+
Sbjct: 77 DDATEKDLSDL--VSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRA 134
Query: 596 ---------------PGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
P + + + V+ +A GM YL S IHRDL ++N LV E
Sbjct: 135 RRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTE 192
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 80/178 (44%), Gaps = 33/178 (18%)
Query: 477 FRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLI 536
F L G LG+G FGQV V+ E +D++ K + + + L
Sbjct: 32 FPRDKLTLGKPLGEGAFGQV------------VMAEAVGIDKDKPKEAVTVAVK---MLK 76
Query: 537 DLGSHGLINNLHCFSQVAVLRSL-HHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD 595
D + +++L S++ +++ + H N+I +G +D L ++ EY + G L+E L+
Sbjct: 77 DDATEKDLSDL--VSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRA 134
Query: 596 ---------------PGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
P + + + V+ +A GM YL S IHRDL ++N LV E
Sbjct: 135 RRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTE 192
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 80/178 (44%), Gaps = 33/178 (18%)
Query: 477 FRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLI 536
F L G LG+G FGQV V+ E +D++ K + + + L
Sbjct: 32 FPRDKLTLGKPLGEGAFGQV------------VMAEAVGIDKDKPKEAVTVAVK---MLK 76
Query: 537 DLGSHGLINNLHCFSQVAVLRSL-HHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD 595
D + +++L S++ +++ + H N+I +G +D L ++ EY + G L+E L+
Sbjct: 77 DDATEKDLSDL--VSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRA 134
Query: 596 ---------------PGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
P + + + V+ +A GM YL S IHRDL ++N LV E
Sbjct: 135 RRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTE 192
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 60/148 (40%), Gaps = 25/148 (16%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LG G FG V+RVT R TG K + E ++ KE
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKE-------------------- 204
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
+ + L H ++ D ++ ++ E+++GG L E + D + + V
Sbjct: 205 -----IQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVE 259
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCL 635
+ R + G+ ++H N +H DL +N +
Sbjct: 260 YMRQVCKGLCHMHENNYVHLDLKPENIM 287
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 71/153 (46%), Gaps = 23/153 (15%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LG G FG+V V H+E+G +K L KQ ++ L +
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKIL--------------DKQKVVKLKQIE-------- 86
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
H ++ +L++++ +++ + L +V EY+AGG + L+ G+ R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF- 145
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
+A I YLHS++LI+RDL +N L+ + G
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG 178
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 80/178 (44%), Gaps = 33/178 (18%)
Query: 477 FRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLI 536
F L G LG+G FGQV V+ E +D++ K + + + L
Sbjct: 32 FPRDKLTLGKPLGEGAFGQV------------VMAEAVGIDKDKPKEAVTVAVK---MLK 76
Query: 537 DLGSHGLINNLHCFSQVAVLRSL-HHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD 595
D + +++L S++ +++ + H N+I +G +D L ++ EY + G L+E L+
Sbjct: 77 DDATEKDLSDL--VSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRA 134
Query: 596 ---------------PGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
P + + + V+ +A GM YL S IHRDL ++N LV E
Sbjct: 135 RRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTE 192
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 67/162 (41%), Gaps = 31/162 (19%)
Query: 483 VRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVD---EEAEKNFLKESKQGLIYLIDLG 539
V G +G+G FG VY+ T V V K VD EE ++ F +E
Sbjct: 34 VGGNKMGEGGFGVVYKGYVNNT-TVAVKKLAAMVDITTEELKQQFDQE------------ 80
Query: 540 SHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ--DPG 597
+ V+ H N++ +G L LV Y+ G+L + L D
Sbjct: 81 -------------IKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT 127
Query: 598 QPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREV 639
PL W R A+ A G+ +LH + IHRD+ S N L+ E
Sbjct: 128 PPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEA 169
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 551 SQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRV--NF 608
++A+ + L H N+++++G ++ + + E + GG+L LL+ PL ++ +
Sbjct: 54 EEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFY 113
Query: 609 ARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
+ I G+ YLH ++HRD+ N L+
Sbjct: 114 TKQILEGLKYLHDNQIVHRDIKGDNVLI 141
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Query: 549 CFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNF 608
F +V +++ L+H N+++ V+ ++ L LV EY +GG + + L G+ R F
Sbjct: 60 LFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF 119
Query: 609 ARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
R I + + Y H ++HRDL ++N L+
Sbjct: 120 -RQIVSAVQYCHQKFIVHRDLKAENLLL 146
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 69/156 (44%), Gaps = 25/156 (16%)
Query: 481 DLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGS 540
D+VR LG+G FG VY ++ +M LK L++ E E
Sbjct: 17 DIVRP--LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKE------------------- 55
Query: 541 HGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPL 600
G+ + L ++ + L H N++R + +++ L+ E+ G L + LQ G+
Sbjct: 56 -GVEHQLR--REIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR-F 111
Query: 601 PWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
+ F ++A + Y H +IHRD+ +N L+
Sbjct: 112 DEQRSATFMEELADALHYCHERKVIHRDIKPENLLM 147
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Query: 549 CFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNF 608
F +V +++ L+H N+++ V+ ++ L LV EY +GG + + L G+ R F
Sbjct: 60 LFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF 119
Query: 609 ARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
R I + + Y H ++HRDL ++N L+
Sbjct: 120 -RQIVSAVQYCHQKFIVHRDLKAENLLL 146
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 67/162 (41%), Gaps = 31/162 (19%)
Query: 483 VRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVD---EEAEKNFLKESKQGLIYLIDLG 539
V G +G+G FG VY+ T V V K VD EE ++ F +E
Sbjct: 34 VGGNKMGEGGFGVVYKGYVNNT-TVAVKKLAAMVDITTEELKQQFDQE------------ 80
Query: 540 SHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ--DPG 597
+ V+ H N++ +G L LV Y+ G+L + L D
Sbjct: 81 -------------IKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT 127
Query: 598 QPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREV 639
PL W R A+ A G+ +LH + IHRD+ S N L+ E
Sbjct: 128 PPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEA 169
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Query: 549 CFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNF 608
F +V +++ L+H N+++ V+ ++ L LV EY +GG + + L G+ R F
Sbjct: 60 LFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF 119
Query: 609 ARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
R I + + Y H ++HRDL ++N L+
Sbjct: 120 -RQIVSAVQYCHQKFIVHRDLKAENLLL 146
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 80/178 (44%), Gaps = 33/178 (18%)
Query: 477 FRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLI 536
F L G LG+G FGQV V+ E +D++ K + + + L
Sbjct: 32 FPRDKLTLGKPLGEGAFGQV------------VMAEAVGIDKDKPKEAVTVAVK---MLK 76
Query: 537 DLGSHGLINNLHCFSQVAVLRSL-HHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD 595
D + +++L S++ +++ + H N+I +G +D L ++ EY + G L+E L+
Sbjct: 77 DDATEKDLSDL--VSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRA 134
Query: 596 ---------------PGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
P + + + V+ +A GM YL S IHRDL ++N LV E
Sbjct: 135 RRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTE 192
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 80/178 (44%), Gaps = 33/178 (18%)
Query: 477 FRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLI 536
F L G LG+G FGQV V+ E +D++ K + + + L
Sbjct: 32 FPRDKLTLGKPLGEGAFGQV------------VMAEAVGIDKDKPKEAVTVAVK---MLK 76
Query: 537 DLGSHGLINNLHCFSQVAVLRSL-HHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD 595
D + +++L S++ +++ + H N+I +G +D L ++ EY + G L+E L+
Sbjct: 77 DDATEKDLSDL--VSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRA 134
Query: 596 ---------------PGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
P + + + V+ +A GM YL S IHRDL ++N LV E
Sbjct: 135 RRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTE 192
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 67/162 (41%), Gaps = 31/162 (19%)
Query: 483 VRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVD---EEAEKNFLKESKQGLIYLIDLG 539
V G +G+G FG VY+ T V V K VD EE ++ F +E
Sbjct: 28 VGGNKMGEGGFGVVYKGYVNNT-TVAVKKLAAMVDITTEELKQQFDQE------------ 74
Query: 540 SHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ--DPG 597
+ V+ H N++ +G L LV Y+ G+L + L D
Sbjct: 75 -------------IKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT 121
Query: 598 QPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREV 639
PL W R A+ A G+ +LH + IHRD+ S N L+ E
Sbjct: 122 PPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEA 163
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 72/167 (43%), Gaps = 23/167 (13%)
Query: 475 RIFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIY 534
R + D G LG+G FG VY +++ ++ LK L++ E K G+
Sbjct: 2 RQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLE---------KAGV-- 50
Query: 535 LIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ 594
H L +V + L H N++R G + ++ L+ EY GT+ LQ
Sbjct: 51 -----EHQLRR------EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ 99
Query: 595 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS 641
+ + + ++A ++Y HS +IHRD+ +N L+ G
Sbjct: 100 KLSK-FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE 145
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Query: 549 CFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNF 608
F +V +++ L+H N+++ V+ ++ L LV EY +GG + + L G+ R F
Sbjct: 60 LFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF 119
Query: 609 ARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
R I + + Y H ++HRDL ++N L+
Sbjct: 120 -RQIVSAVQYCHQKFIVHRDLKAENLLL 146
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Query: 549 CFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNF 608
F +V +++ L+H N+++ V+ ++ L LV EY +GG + + L G+ R F
Sbjct: 60 LFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF 119
Query: 609 ARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
R I + + Y H ++HRDL ++N L+
Sbjct: 120 -RQIVSAVQYCHQKFIVHRDLKAENLLL 146
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 71/154 (46%), Gaps = 24/154 (15%)
Query: 487 LLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINN 546
L+G+G +G V + +++TG ++ +K+ FL+ ++ I
Sbjct: 32 LVGEGSYGMVMKCRNKDTGRIVAIKK-----------FLESDDDKMVKKI---------- 70
Query: 547 LHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRV 606
++ +L+ L H N++ + V K ++ LV E++ L +L P L +
Sbjct: 71 --AMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNG-LDYQVVQ 127
Query: 607 NFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
+ I G+ + HS N+IHRD+ +N LV + G
Sbjct: 128 KYLFQIINGIGFCHSHNIIHRDIKPENILVSQSG 161
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 80/178 (44%), Gaps = 33/178 (18%)
Query: 477 FRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLI 536
F L G LG+G FGQV V+ E +D++ K + + + L
Sbjct: 32 FPRDKLTLGKPLGEGAFGQV------------VMAEAVGIDKDKPKEAVTVAVK---MLK 76
Query: 537 DLGSHGLINNLHCFSQVAVLRSL-HHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD 595
D + +++L S++ +++ + H N+I +G +D L ++ EY + G L+E L+
Sbjct: 77 DDATEEDLSDL--VSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRA 134
Query: 596 ---------------PGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
P + + + V+ +A GM YL S IHRDL ++N LV E
Sbjct: 135 RRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTE 192
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 80/178 (44%), Gaps = 33/178 (18%)
Query: 477 FRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLI 536
F L G LG+G FGQV V+ E +D++ K + + + L
Sbjct: 24 FPRDKLTLGKPLGEGCFGQV------------VMAEAVGIDKDKPKEAVTVAVK---MLK 68
Query: 537 DLGSHGLINNLHCFSQVAVLRSL-HHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD 595
D + +++L S++ +++ + H N+I +G +D L ++ EY + G L+E L+
Sbjct: 69 DDATEKDLSDL--VSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRA 126
Query: 596 ---------------PGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
P + + + V+ +A GM YL S IHRDL ++N LV E
Sbjct: 127 RRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTE 184
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Query: 550 FSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFA 609
F +V +++ L+H N+++ V+ ++ L LV EY +GG + + L G+ R F
Sbjct: 62 FREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF- 120
Query: 610 RDIAAGMTYLHSMNLIHRDLNSQNCLV 636
R I + + Y H ++HRDL ++N L+
Sbjct: 121 RQIVSAVQYCHQKYIVHRDLKAENLLL 147
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 71/153 (46%), Gaps = 23/153 (15%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LG G FG+V V H+E+G +K L KQ ++ L +
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKIL--------------DKQKVVKLKQIE-------- 86
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
H ++ +L++++ +++ + L +V EY+AGG + L+ G+ R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF- 145
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
+A I YLHS++LI+RDL +N L+ + G
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG 178
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 80/195 (41%), Gaps = 42/195 (21%)
Query: 449 PPKSLRPACDLSRTRSRSFRVEASKSRIFRASDLVRGPLLGQGFFGQVYRVTHRETGEVM 508
P K+LRP D+ +FR+E +G+G F +VYR G +
Sbjct: 18 PQKALRP--DMGYNTLANFRIEKK---------------IGRGQFSEVYRAACLLDGVPV 60
Query: 509 VLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFI 568
LK++ D L+D + C ++ +L+ L+H NVI++
Sbjct: 61 ALKKVQIFD-----------------LMDAKARA-----DCIKEIDLLKQLNHPNVIKYY 98
Query: 569 GVLYKDRKLNLVTEYIAGGTLKELL---QDPGQPLPWGQRVNFARDIAAGMTYLHSMNLI 625
+D +LN+V E G L ++ + + +P + + + + ++HS ++
Sbjct: 99 ASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVM 158
Query: 626 HRDLNSQNCLVREVG 640
HRD+ N + G
Sbjct: 159 HRDIKPANVFITATG 173
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 72/167 (43%), Gaps = 23/167 (13%)
Query: 475 RIFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIY 534
R + D G LG+G FG VY +++ ++ LK L++ E K G+
Sbjct: 3 RQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLE---------KAGV-- 51
Query: 535 LIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ 594
H L +V + L H N++R G + ++ L+ EY GT+ LQ
Sbjct: 52 -----EHQLRR------EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ 100
Query: 595 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS 641
+ + + ++A ++Y HS +IHRD+ +N L+ G
Sbjct: 101 KLSK-FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE 146
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Query: 550 FSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFA 609
F +V +++ L+H N+++ V+ ++ L L+ EY +GG + + L G+ R F
Sbjct: 62 FREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKF- 120
Query: 610 RDIAAGMTYLHSMNLIHRDLNSQNCLV 636
R I + + Y H ++HRDL ++N L+
Sbjct: 121 RQIVSAVQYCHQKRIVHRDLKAENLLL 147
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 71/153 (46%), Gaps = 23/153 (15%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LG G FG+V V H+E+G +K L KQ ++ L +
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKIL--------------DKQKVVKLKQIE-------- 86
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
H ++ +L++++ +++ + L +V EY+AGG + L+ G+ R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF- 145
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
+A I YLHS++LI+RDL +N L+ + G
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG 178
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 80/178 (44%), Gaps = 33/178 (18%)
Query: 477 FRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLI 536
F L G LG+G FGQV V+ E +D++ K + + + L
Sbjct: 21 FPRDKLTLGKPLGEGCFGQV------------VMAEAVGIDKDKPKEAVTVAVK---MLK 65
Query: 537 DLGSHGLINNLHCFSQVAVLRSL-HHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD 595
D + +++L S++ +++ + H N+I +G +D L ++ EY + G L+E L+
Sbjct: 66 DDATEKDLSDL--VSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRA 123
Query: 596 ---------------PGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
P + + + V+ +A GM YL S IHRDL ++N LV E
Sbjct: 124 RRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTE 181
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 71/166 (42%), Gaps = 23/166 (13%)
Query: 475 RIFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIY 534
R + D G LG+G FG VY + + ++ LK L++ E K G+
Sbjct: 3 RQWALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLE---------KAGV-- 51
Query: 535 LIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ 594
H L +V + L H N++R G + ++ L+ EY GT+ LQ
Sbjct: 52 -----EHQLRR------EVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQ 100
Query: 595 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
+ + + ++A ++Y HS +IHRD+ +N L+ G
Sbjct: 101 KLSK-FDEQRTATYITELANALSYCHSKKVIHRDIKPENLLLGSAG 145
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 71/153 (46%), Gaps = 23/153 (15%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LG G FG+V V H+E+G +K L KQ ++ L +
Sbjct: 70 LGTGSFGRVMLVKHKESGNHYAMKIL--------------DKQKVVKLKQIE-------- 107
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
H ++ +L++++ +++ + L +V EY+AGG + L+ G+ R
Sbjct: 108 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF- 166
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
+A I YLHS++LI+RDL +N L+ + G
Sbjct: 167 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG 199
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 71/153 (46%), Gaps = 23/153 (15%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LG G FG+V V H+E+G +K L KQ ++ L +
Sbjct: 44 LGTGSFGRVMLVKHKESGNHYAMKIL--------------DKQKVVKLKQIE-------- 81
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
H ++ +L++++ +++ + L +V EY+AGG + L+ G+ R
Sbjct: 82 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF- 140
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
+A I YLHS++LI+RDL +N L+ + G
Sbjct: 141 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG 173
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 71/153 (46%), Gaps = 23/153 (15%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LG G FG+V V H+E+G +K L KQ ++ L +
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKIL--------------DKQKVVKLKQIE-------- 86
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
H ++ +L++++ +++ + L +V EY+AGG + L+ G+ R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARF- 145
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
+A I YLHS++LI+RDL +N L+ + G
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG 178
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 72/166 (43%), Gaps = 23/166 (13%)
Query: 475 RIFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIY 534
R + D G LG+G FG VY +++ ++ LK L++ E K G+ +
Sbjct: 7 RQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLE---------KAGVEH 57
Query: 535 LIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ 594
+ +V + L H N++R G + ++ L+ EY GT+ LQ
Sbjct: 58 QLR-------------REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ 104
Query: 595 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
+ + + ++A ++Y HS +IHRD+ +N L+ G
Sbjct: 105 KLSK-FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAG 149
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 72/154 (46%), Gaps = 27/154 (17%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
+GQG G VY TG+ + ++++ N ++ K+ LI
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQM---------NLQQQPKKELI-------------- 65
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
+++ V+R + N++ ++ +L +V EY+AGG+L +++ + + GQ
Sbjct: 66 --INEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC--MDEGQIAA 121
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS 641
R+ + +LHS +IHRD+ S N L+ GS
Sbjct: 122 VCRECLQALEFLHSNQVIHRDIKSDNILLGMDGS 155
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 72/149 (48%), Gaps = 27/149 (18%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
+G G FG + ++ E++ +K + R E+ ++N +E +IN+
Sbjct: 27 IGAGNFGVARLMRDKQANELVAVKYIER-GEKIDENVKRE---------------IINH- 69
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
RSL H N++RF V+ L +V EY +GG L E + + G+ +
Sbjct: 70 ---------RSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGR-FSEDEARF 119
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
F + + +G++Y H+M + HRDL +N L+
Sbjct: 120 FFQQLISGVSYAHAMQVAHRDLKLENTLL 148
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Query: 549 CFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNF 608
F +V +++ L+H N+++ V+ ++ L L+ EY +GG + + L G+ R F
Sbjct: 58 LFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKF 117
Query: 609 ARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
R I + + Y H ++HRDL ++N L+
Sbjct: 118 -RQIVSAVQYCHQKRIVHRDLKAENLLL 144
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 557 RSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGM 616
RSL H N++RF V+ L ++ EY +GG L E + + G+ + F + + +G+
Sbjct: 71 RSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGR-FSEDEARFFFQQLLSGV 129
Query: 617 TYLHSMNLIHRDLNSQNCLV 636
+Y HSM + HRDL +N L+
Sbjct: 130 SYCHSMQICHRDLKLENTLL 149
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 72/167 (43%), Gaps = 23/167 (13%)
Query: 475 RIFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIY 534
R + D G LG+G FG VY +++ ++ LK L++ E K G+ +
Sbjct: 3 RQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLE---------KAGVEH 53
Query: 535 LIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ 594
+ +V + L H N++R G + ++ L+ EY GT+ LQ
Sbjct: 54 QLR-------------REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ 100
Query: 595 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS 641
+ + + ++A ++Y HS +IHRD+ +N L+ G
Sbjct: 101 KLSK-FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE 146
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 72/154 (46%), Gaps = 27/154 (17%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
+GQG G VY TG+ + ++++ N ++ K+ LI
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQM---------NLQQQPKKELI-------------- 64
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
+++ V+R + N++ ++ +L +V EY+AGG+L +++ + + GQ
Sbjct: 65 --INEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC--MDEGQIAA 120
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS 641
R+ + +LHS +IHRD+ S N L+ GS
Sbjct: 121 VCRECLQALEFLHSNQVIHRDIKSDNILLGMDGS 154
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 72/154 (46%), Gaps = 27/154 (17%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
+GQG G VY TG+ + ++++ N ++ K+ LI
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQM---------NLQQQPKKELI-------------- 64
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
+++ V+R + N++ ++ +L +V EY+AGG+L +++ + + GQ
Sbjct: 65 --INEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC--MDEGQIAA 120
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS 641
R+ + +LHS +IHRD+ S N L+ GS
Sbjct: 121 VCRECLQALEFLHSNQVIHRDIKSDNILLGMDGS 154
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 72/154 (46%), Gaps = 27/154 (17%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
+GQG G VY TG+ + ++++ N ++ K+ LI
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQM---------NLQQQPKKELI-------------- 64
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
+++ V+R + N++ ++ +L +V EY+AGG+L +++ + + GQ
Sbjct: 65 --INEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC--MDEGQIAA 120
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS 641
R+ + +LHS +IHRD+ S N L+ GS
Sbjct: 121 VCRECLQALEFLHSNQVIHRDIKSDNILLGMDGS 154
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 72/167 (43%), Gaps = 23/167 (13%)
Query: 475 RIFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIY 534
R + D G LG+G FG VY +++ ++ LK L++ E K G+ +
Sbjct: 3 RQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLE---------KAGVEH 53
Query: 535 LIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ 594
+ +V + L H N++R G + ++ L+ EY GT+ LQ
Sbjct: 54 QLR-------------REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ 100
Query: 595 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS 641
+ + + ++A ++Y HS +IHRD+ +N L+ G
Sbjct: 101 KLSK-FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE 146
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 73/149 (48%), Gaps = 27/149 (18%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
+G G FG + +++ E++ +K + R E+ ++N +E +IN+
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIER-GEKIDENVKRE---------------IINH- 69
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
RSL H N++RF V+ L +V EY +GG L E + + G+ +
Sbjct: 70 ---------RSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGR-FSEDEARF 119
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
F + + +G++Y H+M + HRDL +N L+
Sbjct: 120 FFQQLISGVSYCHAMQVCHRDLKLENTLL 148
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 60/148 (40%), Gaps = 25/148 (16%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LG G FG V+RVT R TG K + E ++ KE
Sbjct: 59 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKE-------------------- 98
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
+ + L H ++ D ++ ++ E+++GG L E + D + + V
Sbjct: 99 -----IQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVE 153
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCL 635
+ R + G+ ++H N +H DL +N +
Sbjct: 154 YMRQVCKGLCHMHENNYVHLDLKPENIM 181
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 89/205 (43%), Gaps = 39/205 (19%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
+G+G +G+V++ + G V + RV G G+ L
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQT--------------------GEEGM--PL 56
Query: 548 HCFSQVAVLRSLH---HHNVIRFIGV-----LYKDRKLNLVTEYIAGG--TLKELLQDPG 597
+VAVLR L H NV+R V ++ KL LV E++ T + + +PG
Sbjct: 57 STIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPG 116
Query: 598 QPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGSG--FDFHLGQIYLIYV 655
P + + F + G+ +LHS ++HRDL QN LV G DF L +IY +
Sbjct: 117 VPTETIKDMMFQ--LLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQM 174
Query: 656 PYTLFILSAKTKKTYYPNILKKASF 680
T +++ + P +L ++S+
Sbjct: 175 ALTSVVVTLWYRA---PEVLLQSSY 196
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 89/205 (43%), Gaps = 39/205 (19%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
+G+G +G+V++ + G V + RV G G+ L
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQT--------------------GEEGM--PL 56
Query: 548 HCFSQVAVLRSLH---HHNVIRFIGV-----LYKDRKLNLVTEYIAGG--TLKELLQDPG 597
+VAVLR L H NV+R V ++ KL LV E++ T + + +PG
Sbjct: 57 STIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPG 116
Query: 598 QPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGSG--FDFHLGQIYLIYV 655
P + + F + G+ +LHS ++HRDL QN LV G DF L +IY +
Sbjct: 117 VPTETIKDMMFQ--LLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQM 174
Query: 656 PYTLFILSAKTKKTYYPNILKKASF 680
T +++ + P +L ++S+
Sbjct: 175 ALTSVVVTLWYRA---PEVLLQSSY 196
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 73/149 (48%), Gaps = 27/149 (18%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
+G G FG + +++ E++ +K + R E+ ++N +E +IN+
Sbjct: 26 IGSGNFGVARLMRDKQSNELVAVKYIER-GEKIDENVKRE---------------IINH- 68
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
RSL H N++RF V+ L +V EY +GG L E + + G+ +
Sbjct: 69 ---------RSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGR-FSEDEARF 118
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
F + + +G++Y H+M + HRDL +N L+
Sbjct: 119 FFQQLISGVSYCHAMQVCHRDLKLENTLL 147
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 78/170 (45%), Gaps = 34/170 (20%)
Query: 474 SRIFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMV---LKELYRVDEEAE-KNFLKESK 529
R+ SD V +G+G FG VY + + + + +K L R+ E + + FL+E
Sbjct: 19 ERVVTHSDRV----IGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLRE-- 72
Query: 530 QGLIYLIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKL-NLVTEYIAGGT 588
GL+ +R L+H NV+ IG++ L +++ Y+ G
Sbjct: 73 ------------GLL-----------MRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGD 109
Query: 589 LKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
L + ++ P + ++F +A GM YL +HRDL ++NC++ E
Sbjct: 110 LLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDE 159
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 70/153 (45%), Gaps = 23/153 (15%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LG G FG+V V H+ETG +K L KQ ++ L +
Sbjct: 42 LGTGSFGRVMLVKHKETGNHYAMKIL--------------DKQKVVKLKQIE-------- 79
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
H ++ +L++++ +++ + L +V EY+ GG + L+ G+ R
Sbjct: 80 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF- 138
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
+A I YLHS++LI+RDL +N L+ + G
Sbjct: 139 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG 171
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 73/149 (48%), Gaps = 27/149 (18%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
+G G FG + +++ E++ +K + R E+ ++N +E +IN+
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIER-GEKIDENVKRE---------------IINH- 69
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
RSL H N++RF V+ L +V EY +GG L E + + G+ +
Sbjct: 70 ---------RSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGR-FSEDEARF 119
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
F + + +G++Y H+M + HRDL +N L+
Sbjct: 120 FFQQLISGVSYCHAMQVCHRDLKLENTLL 148
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 71/153 (46%), Gaps = 23/153 (15%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LG G FG+V V H+E+G +K L KQ ++ L +
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKIL--------------DKQKVVKLKQIE-------- 86
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
H ++ +L++++ +++ + L +V EY+AGG + L+ G+ R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF- 145
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
+A I YLHS++LI+RDL +N L+ + G
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG 178
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Query: 545 NNLHCF-SQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWG 603
L F ++V VLR H N++ F+G +L +VT++ G +L L
Sbjct: 46 QQLQAFKNEVGVLRKTRHVNILLFMG-YSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMI 104
Query: 604 QRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
+ ++ AR A GM YLH+ ++IHRDL S N + E
Sbjct: 105 KLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHE 139
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 71/153 (46%), Gaps = 23/153 (15%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LG G FG+V V H+E+G +K L KQ ++ L +
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKIL--------------DKQKVVKLKQIE-------- 86
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
H ++ +L++++ +++ + L +V EY+AGG + L+ G+ R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF- 145
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
+A I YLHS++LI+RDL +N L+ + G
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG 178
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 71/153 (46%), Gaps = 23/153 (15%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LG G FG+V V H+E+G +K L KQ ++ L +
Sbjct: 50 LGTGSFGRVMLVKHKESGNHYAMKIL--------------DKQKVVKLKQIE-------- 87
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
H ++ +L++++ +++ + L +V EY+AGG + L+ G+ R
Sbjct: 88 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF- 146
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
+A I YLHS++LI+RDL +N L+ + G
Sbjct: 147 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG 179
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 71/153 (46%), Gaps = 23/153 (15%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LG G FG+V V H+E+G +K L KQ ++ L +
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKIL--------------DKQKVVKLKQIE-------- 86
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
H ++ +L++++ +++ + L +V EY+AGG + L+ G+ R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF- 145
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
+A I YLHS++LI+RDL +N L+ + G
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG 178
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 71/153 (46%), Gaps = 23/153 (15%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LG G FG+V V H+E+G +K L KQ ++ L +
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKIL--------------DKQKVVKLKQIE-------- 86
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
H ++ +L++++ +++ + L +V EY+AGG + L+ G+ R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF- 145
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
+A I YLHS++LI+RDL +N L+ + G
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG 178
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 71/153 (46%), Gaps = 23/153 (15%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LG G FG+V V H+E+G +K L KQ ++ L +
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKIL--------------DKQKVVKLKQIE-------- 86
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
H ++ +L++++ +++ + L +V EY+AGG + L+ G+ R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF- 145
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
+A I YLHS++LI+RDL +N L+ + G
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG 178
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 71/153 (46%), Gaps = 23/153 (15%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LG G FG+V V H+E+G +K L KQ ++ L +
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKIL--------------DKQKVVKLKQIE-------- 86
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
H ++ +L++++ +++ + L +V EY+AGG + L+ G+ R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF- 145
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
+A I YLHS++LI+RDL +N L+ + G
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG 178
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 71/153 (46%), Gaps = 23/153 (15%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LG G FG+V V H+E+G +K L KQ ++ L +
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKIL--------------DKQKVVKLKQIE-------- 86
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
H ++ +L++++ +++ + L +V EY+AGG + L+ G+ R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF- 145
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
+A I YLHS++LI+RDL +N L+ + G
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG 178
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 71/153 (46%), Gaps = 23/153 (15%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LG G FG+V V H+E+G +K L KQ ++ L +
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKIL--------------DKQKVVKLKQIE-------- 86
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
H ++ +L++++ +++ + L +V EY+AGG + L+ G+ R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF- 145
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
+A I YLHS++LI+RDL +N L+ + G
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG 178
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 52/93 (55%), Gaps = 2/93 (2%)
Query: 550 FSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP-GQPLPWGQRVNF 608
++ +++ L H ++R V+ ++ + ++TEY+ G+L + L+ P G L + ++
Sbjct: 52 LAEANLMKQLQHQRLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDM 110
Query: 609 ARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS 641
A IA GM ++ N IHR+L + N LV + S
Sbjct: 111 AAQIAEGMAFIEERNYIHRNLRAANILVSDTLS 143
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 550 FSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFA 609
F +V + + L+H N+++ V+ ++ L LV EY +GG + + L G+ R F
Sbjct: 61 FREVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKF- 119
Query: 610 RDIAAGMTYLHSMNLIHRDLNSQNCLV 636
R I + + Y H ++HRDL ++N L+
Sbjct: 120 RQIVSAVQYCHQKFIVHRDLKAENLLL 146
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 72/166 (43%), Gaps = 23/166 (13%)
Query: 475 RIFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIY 534
R + D G LG+G FG VY R++ ++ LK L++ E K G+ +
Sbjct: 7 RQWTLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLE---------KAGVEH 57
Query: 535 LIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ 594
+ +V + L H N++R G + ++ L+ EY GT+ LQ
Sbjct: 58 QLR-------------REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ 104
Query: 595 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
+ + + ++A ++Y HS +IHRD+ +N L+ G
Sbjct: 105 KLSR-FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSNG 149
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 71/153 (46%), Gaps = 23/153 (15%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LG G FG+V V H+E+G +K L KQ ++ L +
Sbjct: 70 LGTGSFGRVMLVKHKESGNHYAMKIL--------------DKQKVVKLKQIE-------- 107
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
H ++ +L++++ +++ + L +V EY+AGG + L+ G+ R
Sbjct: 108 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF- 166
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
+A I YLHS++LI+RDL +N L+ + G
Sbjct: 167 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG 199
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 70/153 (45%), Gaps = 23/153 (15%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LG G FG+V V H+ETG +K L KQ ++ L +
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKIL--------------DKQKVVKLKQIE-------- 86
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
H ++ +L++++ +++ + L +V EY+ GG + L+ G+ R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF- 145
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
+A I YLHS++LI+RDL +N L+ + G
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG 178
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 71/153 (46%), Gaps = 23/153 (15%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LG G FG+V V H+E+G +K L KQ ++ L +
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKIL--------------DKQKVVKLKQIE-------- 86
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
H ++ +L++++ +++ + L +V EY+AGG + L+ G+ R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF- 145
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
+A I YLHS++LI+RDL +N L+ + G
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG 178
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 71/153 (46%), Gaps = 23/153 (15%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LG G FG+V V H+E+G +K L KQ ++ L +
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKIL--------------DKQKVVKLKQIE-------- 86
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
H ++ +L++++ +++ + L +V EY+AGG + L+ G+ R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF- 145
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
+A I YLHS++LI+RDL +N L+ + G
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG 178
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 70/153 (45%), Gaps = 23/153 (15%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LG G FG+V V H+ETG +K L KQ ++ L +
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKIL--------------DKQKVVKLKQIE-------- 86
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
H ++ +L++++ +++ + L +V EY+ GG + L+ G+ R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF- 145
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
+A I YLHS++LI+RDL +N L+ + G
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG 178
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 89/205 (43%), Gaps = 39/205 (19%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
+G+G +G+V++ + G V + RV G G+ L
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQT--------------------GEEGM--PL 56
Query: 548 HCFSQVAVLRSLH---HHNVIRFIGV-----LYKDRKLNLVTEYIAGG--TLKELLQDPG 597
+VAVLR L H NV+R V ++ KL LV E++ T + + +PG
Sbjct: 57 STIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPG 116
Query: 598 QPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGSG--FDFHLGQIYLIYV 655
P + + F + G+ +LHS ++HRDL QN LV G DF L +IY +
Sbjct: 117 VPTETIKDMMFQ--LLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQM 174
Query: 656 PYTLFILSAKTKKTYYPNILKKASF 680
T +++ + P +L ++S+
Sbjct: 175 ALTSVVVTLWYRA---PEVLLQSSY 196
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 70/153 (45%), Gaps = 23/153 (15%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LG G FG+V V H+ETG +K L KQ ++ L +
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKIL--------------DKQKVVKLKQIE-------- 86
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
H ++ +L++++ +++ + L +V EY+ GG + L+ G+ R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF- 145
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
+A I YLHS++LI+RDL +N L+ + G
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG 178
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 72/166 (43%), Gaps = 23/166 (13%)
Query: 475 RIFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIY 534
R + D G LG+G FG VY R++ ++ LK L++ E K G+ +
Sbjct: 7 RQWTLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLE---------KAGVEH 57
Query: 535 LIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ 594
+ +V + L H N++R G + ++ L+ EY GT+ LQ
Sbjct: 58 QLR-------------REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ 104
Query: 595 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
+ + + ++A ++Y HS +IHRD+ +N L+ G
Sbjct: 105 KLSR-FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSNG 149
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 70/153 (45%), Gaps = 23/153 (15%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LG G FG+V V H ETG +K L KQ ++ L +
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKIL--------------DKQKVVKLKQIE-------- 86
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
H ++ +L++++ +++ + L +V EY+AGG + L+ G+ R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF- 145
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
+A I YLHS++LI+RDL +N L+ + G
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG 178
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 70/153 (45%), Gaps = 23/153 (15%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LG G FG+V V H+ETG +K L KQ ++ L +
Sbjct: 42 LGTGSFGRVMLVKHKETGNHYAMKIL--------------DKQKVVKLKQIE-------- 79
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
H ++ +L++++ +++ + L +V EY+ GG + L+ G+ R
Sbjct: 80 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF- 138
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
+A I YLHS++LI+RDL +N L+ + G
Sbjct: 139 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG 171
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 549 CFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNF 608
F +V +++ L+H N+++ V+ ++ L LV EY +GG + + L G R F
Sbjct: 53 LFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKF 112
Query: 609 ARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
R I + + Y H ++HRDL ++N L+
Sbjct: 113 -RQIVSAVQYCHQKFIVHRDLKAENLLL 139
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 70/153 (45%), Gaps = 23/153 (15%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LG G FG+V V H+ETG +K L KQ ++ L +
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKIL--------------DKQKVVKLKQIE-------- 87
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
H ++ +L++++ +++ + L +V EY+ GG + L+ G+ R
Sbjct: 88 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF- 146
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
+A I YLHS++LI+RDL +N L+ + G
Sbjct: 147 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG 179
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 70/153 (45%), Gaps = 23/153 (15%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LG G FG+V V H+ETG +K L KQ ++ L +
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKIL--------------DKQKVVKLKQIE-------- 87
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
H ++ +L++++ +++ + L +V EY+ GG + L+ G+ R
Sbjct: 88 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF- 146
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
+A I YLHS++LI+RDL +N L+ + G
Sbjct: 147 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG 179
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/170 (20%), Positives = 72/170 (42%), Gaps = 33/170 (19%)
Query: 469 VEASKSRIFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKEL---YRVDEEAEKNFL 525
VE + ++ D++ LG G FG V+R + TG V V K + Y +D+ KN
Sbjct: 42 VEVKQGSVYDYYDILEE--LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKN-- 97
Query: 526 KESKQGLIYLIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIA 585
+++++ LHH +I ++ L+ E+++
Sbjct: 98 --------------------------EISIMNQLHHPKLINLHDAFEDKYEMVLILEFLS 131
Query: 586 GGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCL 635
GG L + + + + +N+ R G+ ++H +++H D+ +N +
Sbjct: 132 GGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIM 181
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 70/153 (45%), Gaps = 23/153 (15%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LG G FG+V V H+ETG +K L KQ ++ L +
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKIL--------------DKQKVVKLKQIE-------- 87
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
H ++ +L++++ +++ + L +V EY+ GG + L+ G+ R
Sbjct: 88 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF- 146
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
+A I YLHS++LI+RDL +N L+ + G
Sbjct: 147 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG 179
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 70/163 (42%), Gaps = 24/163 (14%)
Query: 478 RASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLID 537
+A D ++G+G FG+V V H+ + +V +K L + + +K S +
Sbjct: 73 KAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFE------MIKRSDSAFFW--- 123
Query: 538 LGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPG 597
+ ++ + V++ D+ L +V EY+ GG L L+ +
Sbjct: 124 -------------EERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYD 170
Query: 598 QPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
P W + + ++ + +HSM LIHRD+ N L+ + G
Sbjct: 171 VPEKWAKF--YTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHG 211
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 6/96 (6%)
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLY--KDRKLNLVTEYIAGGTLKELLQDPG-QPLPWGQ 604
+ ++A+L+ L H NV++ + VL + L +V E + G + E+ P +PL Q
Sbjct: 82 QVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEV---PTLKPLSEDQ 138
Query: 605 RVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
+ +D+ G+ YLH +IHRD+ N LV E G
Sbjct: 139 ARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDG 174
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 71/153 (46%), Gaps = 23/153 (15%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LG G FG+V V H+E+G +K L KQ ++ L +
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKIL--------------DKQKVVKLKQIE-------- 86
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
H ++ +L++++ +++ + L +V EY+AGG + L+ G+ R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF- 145
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
+A I YLHS++LI+RDL +N ++ + G
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLIIDQQG 178
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 69/162 (42%), Gaps = 23/162 (14%)
Query: 480 SDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLG 539
D G LG+G FG VY ++ ++ LK L++ E K G+
Sbjct: 5 EDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLE---------KAGV------- 48
Query: 540 SHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQP 599
H L +V + L H N++R G + ++ L+ EY GT+ LQ +
Sbjct: 49 EHQLRR------EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK- 101
Query: 600 LPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS 641
+ + ++A ++Y HS +IHRD+ +N L+ G
Sbjct: 102 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE 143
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 70/153 (45%), Gaps = 23/153 (15%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LG G FG+V V H+ETG +K L KQ ++ L +
Sbjct: 70 LGTGSFGRVMLVKHKETGNHYAMKIL--------------DKQKVVKLKQIE-------- 107
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
H ++ +L++++ +++ + L +V EY+ GG + L+ G+ R
Sbjct: 108 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF- 166
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
+A I YLHS++LI+RDL +N L+ + G
Sbjct: 167 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG 199
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 65/152 (42%), Gaps = 25/152 (16%)
Query: 484 RGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGL 543
+ +LG G FGQV++ TG LK ++ + + G+
Sbjct: 93 KTEILGGGRFGQVHKCEETATG----LKLAAKI---------------------IKTRGM 127
Query: 544 INNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWG 603
+ ++++V+ L H N+I+ + LV EY+ GG L + + D L
Sbjct: 128 KDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTEL 187
Query: 604 QRVNFARDIAAGMTYLHSMNLIHRDLNSQNCL 635
+ F + I G+ ++H M ++H DL +N L
Sbjct: 188 DTILFMKQICEGIRHMHQMYILHLDLKPENIL 219
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 2/92 (2%)
Query: 552 QVAVLRSLHHHNVIRFIGVLYKD--RKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFA 609
++ +LR L H NVI+ + VLY + +K+ +V EY G + L P + P Q +
Sbjct: 56 EIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYF 115
Query: 610 RDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS 641
+ G+ YLHS ++H+D+ N L+ G+
Sbjct: 116 CQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGT 147
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 73/174 (41%), Gaps = 33/174 (18%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
+G G +G VY+ +G + LK + RV G GL +
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSV-RVPN--------------------GEEGL--PI 48
Query: 548 HCFSQVAVLRSLH---HHNVIRFIGVLYKDR-----KLNLVTEYIAGGTLKELLQDPGQP 599
+VA+LR L H NV+R + V R K+ LV E++ L + P
Sbjct: 49 STVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPG 108
Query: 600 LPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGSG--FDFHLGQIY 651
LP + R G+ +LH+ ++HRDL +N LV G+ DF L +IY
Sbjct: 109 LPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIY 162
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 73/174 (41%), Gaps = 33/174 (18%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
+G G +G VY+ +G + LK + RV G GL +
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSV-RVPN--------------------GEEGL--PI 48
Query: 548 HCFSQVAVLRSLH---HHNVIRFIGVLYKDR-----KLNLVTEYIAGGTLKELLQDPGQP 599
+VA+LR L H NV+R + V R K+ LV E++ L + P
Sbjct: 49 STVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPG 108
Query: 600 LPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGSG--FDFHLGQIY 651
LP + R G+ +LH+ ++HRDL +N LV G+ DF L +IY
Sbjct: 109 LPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIY 162
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 73/174 (41%), Gaps = 33/174 (18%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
+G G +G VY+ +G + LK + RV G GL +
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSV-RVPN--------------------GEEGL--PI 48
Query: 548 HCFSQVAVLRSLH---HHNVIRFIGVLYKDR-----KLNLVTEYIAGGTLKELLQDPGQP 599
+VA+LR L H NV+R + V R K+ LV E++ L + P
Sbjct: 49 STVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPG 108
Query: 600 LPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGSG--FDFHLGQIY 651
LP + R G+ +LH+ ++HRDL +N LV G+ DF L +IY
Sbjct: 109 LPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIY 162
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 71/149 (47%), Gaps = 27/149 (18%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
+G G FG + +++ E++ +K + R E+ N +E +IN+
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIER-GEKIAANVKRE---------------IINH- 69
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
RSL H N++RF V+ L +V EY +GG L E + + G+ +
Sbjct: 70 ---------RSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGR-FSEDEARF 119
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
F + + +G++Y H+M + HRDL +N L+
Sbjct: 120 FFQQLISGVSYCHAMQVCHRDLKLENTLL 148
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 33/178 (18%)
Query: 477 FRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLI 536
F L G LG+G FGQV V+ E +D++ K + + + L
Sbjct: 32 FPRDKLTLGKPLGEGAFGQV------------VMAEAVGIDKDKPKEAVTVAVK---MLK 76
Query: 537 DLGSHGLINNLHCFSQVAVLRSL-HHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD 595
D + +++L S++ +++ + H N+I +G +D L ++ Y + G L+E L+
Sbjct: 77 DDATEKDLSDL--VSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRA 134
Query: 596 ---------------PGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
P + + + V+ +A GM YL S IHRDL ++N LV E
Sbjct: 135 RRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTE 192
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 59/136 (43%), Gaps = 13/136 (9%)
Query: 516 VDEEAEKNFLKESKQGLIYLIDLG-------------SHGLINNLHCFSQVAVLRSLHHH 562
V + +E F++E G L+ LG G ++ + V+ L H
Sbjct: 4 VIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHP 63
Query: 563 NVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSM 622
+++ GV + + LVTE++ G L + L+ + D+ GM YL
Sbjct: 64 KLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 123
Query: 623 NLIHRDLNSQNCLVRE 638
+IHRDL ++NCLV E
Sbjct: 124 CVIHRDLAARNCLVGE 139
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 72/154 (46%), Gaps = 27/154 (17%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
+GQG G VY TG+ + ++++ N ++ K+ LI
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQM---------NLQQQPKKELI-------------- 65
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
+++ V+R + N++ ++ +L +V EY+AGG+L +++ + + GQ
Sbjct: 66 --INEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC--MDEGQIAA 121
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS 641
R+ + +LHS +IHR++ S N L+ GS
Sbjct: 122 VCRECLQALEFLHSNQVIHRNIKSDNILLGMDGS 155
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 69/153 (45%), Gaps = 23/153 (15%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LG G FG+V V H ETG +K L KQ ++ L +
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKIL--------------DKQKVVKLKQIE-------- 87
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
H ++ +L++++ +++ + L +V EY+ GG + L+ G+ R
Sbjct: 88 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF- 146
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
+A I YLHS++LI+RDL +N L+ + G
Sbjct: 147 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG 179
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 54/105 (51%), Gaps = 16/105 (15%)
Query: 550 FSQVAVLRS-LHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELL------QDPGQ---- 598
F A+LR+ L H NV+ +GV+ KD+ L+++ Y + G L E L D G
Sbjct: 59 FRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDD 118
Query: 599 -----PLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
L V+ IAAGM YL S +++H+DL ++N LV +
Sbjct: 119 RTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYD 163
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 69/153 (45%), Gaps = 23/153 (15%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LG G FG+V V H ETG +K L KQ ++ L +
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKIL--------------DKQKVVKLKQIE-------- 86
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
H ++ +L++++ +++ + L +V EY+ GG + L+ G+ R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF- 145
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
+A I YLHS++LI+RDL +N L+ + G
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG 178
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 54/105 (51%), Gaps = 16/105 (15%)
Query: 550 FSQVAVLRS-LHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELL------QDPGQ---- 598
F A+LR+ L H NV+ +GV+ KD+ L+++ Y + G L E L D G
Sbjct: 76 FRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDD 135
Query: 599 -----PLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
L V+ IAAGM YL S +++H+DL ++N LV +
Sbjct: 136 RTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYD 180
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 69/153 (45%), Gaps = 23/153 (15%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LG G FG+V V H ETG +K L KQ ++ L +
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKIL--------------DKQKVVKLKQIE-------- 86
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
H ++ +L++++ +++ + L +V EY+ GG + L+ G+ R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF- 145
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
+A I YLHS++LI+RDL +N L+ + G
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG 178
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 33/178 (18%)
Query: 477 FRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLI 536
F L G LG+G FGQV V+ E +D++ K + + + L
Sbjct: 32 FPRDKLTLGKPLGEGAFGQV------------VMAEAVGIDKDKPKEAVTVAVK---MLK 76
Query: 537 DLGSHGLINNLHCFSQVAVLRSL-HHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD 595
D + +++L S++ +++ + H N+I +G +D L ++ Y + G L+E L+
Sbjct: 77 DDATEKDLSDL--VSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRA 134
Query: 596 ---------------PGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
P + + + V+ +A GM YL S IHRDL ++N LV E
Sbjct: 135 RRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTE 192
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 66/159 (41%), Gaps = 22/159 (13%)
Query: 478 RASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLID 537
+ D G LLG+G F VYR TG + +K +D++A K G++ +
Sbjct: 9 KIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIK---MIDKKAM------YKAGMVQRVQ 59
Query: 538 LGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPG 597
++V + L H +++ + LV E G + L++
Sbjct: 60 -------------NEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRV 106
Query: 598 QPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
+P + +F I GM YLHS ++HRDL N L+
Sbjct: 107 KPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLL 145
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 69/153 (45%), Gaps = 23/153 (15%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LG G FG+V V H ETG +K L KQ ++ L +
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKIL--------------DKQKVVKLKQIE-------- 87
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
H ++ +L++++ +++ + L +V EY+ GG + L+ G+ R
Sbjct: 88 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF- 146
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
+A I YLHS++LI+RDL +N L+ + G
Sbjct: 147 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG 179
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 69/153 (45%), Gaps = 23/153 (15%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LG G FG+V V H ETG +K L KQ ++ L +
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKIL--------------DKQKVVKLKQIE-------- 86
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
H ++ +L++++ +++ + L +V EY+ GG + L+ G+ R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF- 145
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
+A I YLHS++LI+RDL +N L+ + G
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG 178
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 69/153 (45%), Gaps = 23/153 (15%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LG G FG+V V H ETG +K L KQ ++ L +
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKIL--------------DKQKVVKLKQIE-------- 86
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
H ++ +L++++ +++ + L +V EY+ GG + L+ G+ R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF- 145
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
+A I YLHS++LI+RDL +N L+ + G
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG 178
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 67/155 (43%), Gaps = 29/155 (18%)
Query: 487 LLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINN 546
L+G G FG+VY+ R+ +V A K ES QG+
Sbjct: 46 LIGHGVFGKVYKGVLRDGAKV------------ALKRRTPESSQGIEEFE---------- 83
Query: 547 LHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD---PGQPLPWG 603
+++ L H +++ IG + ++ L+ +Y+ G LK L P + W
Sbjct: 84 ----TEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWE 139
Query: 604 QRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
QR+ A G+ YLH+ +IHRD+ S N L+ E
Sbjct: 140 QRLEICIGAARGLHYLHTRAIIHRDVKSINILLDE 174
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 69/153 (45%), Gaps = 23/153 (15%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LG G FG+V V H ETG +K L KQ ++ L +
Sbjct: 35 LGTGSFGRVMLVKHMETGNHYAMKIL--------------DKQKVVKLKQIE-------- 72
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
H ++ +L++++ +++ + L +V EY+ GG + L+ G+ R
Sbjct: 73 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF- 131
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
+A I YLHS++LI+RDL +N L+ + G
Sbjct: 132 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG 164
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 69/153 (45%), Gaps = 23/153 (15%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LG G FG+V V H ETG +K L KQ ++ L +
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKIL--------------DKQKVVKLKQIE-------- 87
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
H ++ +L++++ +++ + L +V EY+ GG + L+ G+ R
Sbjct: 88 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF- 146
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
+A I YLHS++LI+RDL +N L+ + G
Sbjct: 147 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG 179
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 67/155 (43%), Gaps = 29/155 (18%)
Query: 487 LLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINN 546
L+G G FG+VY+ R+ +V A K ES QG+
Sbjct: 46 LIGHGVFGKVYKGVLRDGAKV------------ALKRRTPESSQGIEEFE---------- 83
Query: 547 LHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD---PGQPLPWG 603
+++ L H +++ IG + ++ L+ +Y+ G LK L P + W
Sbjct: 84 ----TEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWE 139
Query: 604 QRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
QR+ A G+ YLH+ +IHRD+ S N L+ E
Sbjct: 140 QRLEICIGAARGLHYLHTRAIIHRDVKSINILLDE 174
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 69/153 (45%), Gaps = 23/153 (15%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LG G FG+V V H ETG +K L KQ ++ L +
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKIL--------------DKQKVVKLKQIE-------- 86
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
H ++ +L++++ +++ + L +V EY+ GG + L+ G+ R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF- 145
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
+A I YLHS++LI+RDL +N L+ + G
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG 178
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 70/158 (44%), Gaps = 24/158 (15%)
Query: 480 SDLVRGPLLGQGFFGQVYR-VTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDL 538
D+V +LG+GFFG+VY V GE + + +K K+
Sbjct: 8 EDVVLNRILGEGFFGEVYEGVYTNHKGEKINVA-------------VKTCKKDCT----- 49
Query: 539 GSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQ 598
L N S+ ++++L H ++++ IG++ ++ ++ E G L L+
Sbjct: 50 ----LDNKEKFMSEAVIMKNLDHPHIVKLIGII-EEEPTWIIMELYPYGELGHYLERNKN 104
Query: 599 PLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
L V ++ I M YL S+N +HRD+ +N LV
Sbjct: 105 SLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILV 142
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 64/162 (39%), Gaps = 31/162 (19%)
Query: 483 VRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVD---EEAEKNFLKESKQGLIYLIDLG 539
V G G+G FG VY+ T V V K VD EE ++ F +E
Sbjct: 25 VGGNKXGEGGFGVVYKGYVNNT-TVAVKKLAAMVDITTEELKQQFDQE------------ 71
Query: 540 SHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ--DPG 597
+ V H N++ +G L LV Y G+L + L D
Sbjct: 72 -------------IKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGT 118
Query: 598 QPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREV 639
PL W R A+ A G+ +LH + IHRD+ S N L+ E
Sbjct: 119 PPLSWHXRCKIAQGAANGINFLHENHHIHRDIKSANILLDEA 160
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 70/158 (44%), Gaps = 24/158 (15%)
Query: 480 SDLVRGPLLGQGFFGQVYR-VTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDL 538
D+V +LG+GFFG+VY V GE + + +K K+
Sbjct: 24 EDVVLNRILGEGFFGEVYEGVYTNHKGEKINVA-------------VKTCKKDCT----- 65
Query: 539 GSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQ 598
L N S+ ++++L H ++++ IG++ ++ ++ E G L L+
Sbjct: 66 ----LDNKEKFMSEAVIMKNLDHPHIVKLIGII-EEEPTWIIMELYPYGELGHYLERNKN 120
Query: 599 PLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
L V ++ I M YL S+N +HRD+ +N LV
Sbjct: 121 SLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILV 158
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 71/166 (42%), Gaps = 33/166 (19%)
Query: 485 GPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLI 544
G +LG+G FG V RE +L + D K +K K +I D+
Sbjct: 28 GRMLGKGEFGSV-----REA-------QLKQEDGSFVKVAVKMLKADIIASSDIEEF--- 72
Query: 545 NNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELL----- 593
+ A ++ H +V + +GV + R ++ ++ G L L
Sbjct: 73 -----LREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRI 127
Query: 594 -QDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
++P LP V F DIA GM YL S N IHRDL ++NC++ E
Sbjct: 128 GENPFN-LPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAE 172
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 70/158 (44%), Gaps = 24/158 (15%)
Query: 480 SDLVRGPLLGQGFFGQVYR-VTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDL 538
D+V +LG+GFFG+VY V GE + + +K K+
Sbjct: 12 EDVVLNRILGEGFFGEVYEGVYTNHKGEKINVA-------------VKTCKKDCT----- 53
Query: 539 GSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQ 598
L N S+ ++++L H ++++ IG++ ++ ++ E G L L+
Sbjct: 54 ----LDNKEKFMSEAVIMKNLDHPHIVKLIGII-EEEPTWIIMELYPYGELGHYLERNKN 108
Query: 599 PLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
L V ++ I M YL S+N +HRD+ +N LV
Sbjct: 109 SLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILV 146
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 73/167 (43%), Gaps = 30/167 (17%)
Query: 482 LVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSH 541
L+ G +LG+G FG V L + D + K +K K +D S
Sbjct: 36 LILGKILGEGEFGSVME------------GNLKQEDGTSLKVAVKTMK------LDNSSQ 77
Query: 542 GLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDR-----KLNLVTEYIAGGTLKELL--- 593
I S+ A ++ H NVIR +GV + K ++ ++ G L L
Sbjct: 78 REIEEF--LSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYS 135
Query: 594 --QDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
+ + +P + F DIA GM YL + N +HRDL ++NC++R+
Sbjct: 136 RLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRD 182
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 59/136 (43%), Gaps = 13/136 (9%)
Query: 516 VDEEAEKNFLKESKQGLIYLIDLG-------------SHGLINNLHCFSQVAVLRSLHHH 562
V + +E F++E G L+ LG G ++ + V+ L H
Sbjct: 3 VIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHP 62
Query: 563 NVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSM 622
+++ GV + + LV E++ G L + L+ + D+ GM YL
Sbjct: 63 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 122
Query: 623 NLIHRDLNSQNCLVRE 638
++IHRDL ++NCLV E
Sbjct: 123 SVIHRDLAARNCLVGE 138
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 69/153 (45%), Gaps = 23/153 (15%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LG G FG+V V H+ETG +K L KQ ++ L +
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKIL--------------DKQKVVKLKQIE-------- 87
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
H ++ +L++++ +++ + L +V EY GG + L+ G+ R
Sbjct: 88 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF- 146
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
+A I YLHS++LI+RDL +N ++ + G
Sbjct: 147 YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQG 179
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 75/166 (45%), Gaps = 28/166 (16%)
Query: 477 FRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLI 536
+ D + LG G G V++V+H+ +G VM K ++ + A +N
Sbjct: 3 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRN------------- 49
Query: 537 DLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP 596
++ VL + ++ F G Y D ++++ E++ GG+L ++L+
Sbjct: 50 -----------QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA 98
Query: 597 GQ-PLPWGQRVNFARDIAAGMTYLHSMN-LIHRDLNSQNCLVREVG 640
G+ P +V+ A + G+TYL + ++HRD+ N LV G
Sbjct: 99 GRIPEQILGKVSIA--VIKGLTYLREKHKIMHRDVKPSNILVNSRG 142
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 74/166 (44%), Gaps = 28/166 (16%)
Query: 477 FRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLI 536
+ D + LG G G V++V+H+ +G VM K LI
Sbjct: 3 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARK-----------------------LI 39
Query: 537 DLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP 596
L I N ++ VL + ++ F G Y D ++++ E++ GG+L ++L+
Sbjct: 40 HLEIKPAIRN-QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA 98
Query: 597 GQ-PLPWGQRVNFARDIAAGMTYLHSMN-LIHRDLNSQNCLVREVG 640
G+ P +V+ A + G+TYL + ++HRD+ N LV G
Sbjct: 99 GRIPEQILGKVSIA--VIKGLTYLREKHKIMHRDVKPSNILVNSRG 142
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 74/166 (44%), Gaps = 28/166 (16%)
Query: 477 FRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLI 536
+ D + LG G G V++V+H+ +G VM K LI
Sbjct: 3 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARK-----------------------LI 39
Query: 537 DLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP 596
L I N ++ VL + ++ F G Y D ++++ E++ GG+L ++L+
Sbjct: 40 HLEIKPAIRN-QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA 98
Query: 597 GQ-PLPWGQRVNFARDIAAGMTYLHSMN-LIHRDLNSQNCLVREVG 640
G+ P +V+ A + G+TYL + ++HRD+ N LV G
Sbjct: 99 GRIPEQILGKVSIA--VIKGLTYLREKHKIMHRDVKPSNILVNSRG 142
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 74/166 (44%), Gaps = 28/166 (16%)
Query: 477 FRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLI 536
+ D + LG G G V++V+H+ +G VM K LI
Sbjct: 3 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARK-----------------------LI 39
Query: 537 DLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP 596
L I N ++ VL + ++ F G Y D ++++ E++ GG+L ++L+
Sbjct: 40 HLEIKPAIRN-QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA 98
Query: 597 GQ-PLPWGQRVNFARDIAAGMTYLHSMN-LIHRDLNSQNCLVREVG 640
G+ P +V+ A + G+TYL + ++HRD+ N LV G
Sbjct: 99 GRIPEQILGKVSIA--VIKGLTYLREKHKIMHRDVKPSNILVNSRG 142
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 72/155 (46%), Gaps = 28/155 (18%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LG G G V++V+H+ +G VM K ++ + A +N
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRN------------------------ 49
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQ-PLPWGQRV 606
++ VL + ++ F G Y D ++++ E++ GG+L ++L+ G+ P +V
Sbjct: 50 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKV 109
Query: 607 NFARDIAAGMTYLHSMN-LIHRDLNSQNCLVREVG 640
+ A + G+TYL + ++HRD+ N LV G
Sbjct: 110 SIA--VIKGLTYLREKHKIMHRDVKPSNILVNSRG 142
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 60/139 (43%), Gaps = 13/139 (9%)
Query: 513 LYRVDEEAEKNFLKESKQGLIYLIDLG-------------SHGLINNLHCFSQVAVLRSL 559
L+ V + +E F++E G L+ LG G ++ + V+ L
Sbjct: 20 LHMVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDDFIEEAEVMMKL 79
Query: 560 HHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYL 619
H +++ GV + + LV E++ G L + L+ + D+ GM YL
Sbjct: 80 SHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYL 139
Query: 620 HSMNLIHRDLNSQNCLVRE 638
+IHRDL ++NCLV E
Sbjct: 140 EEACVIHRDLAARNCLVGE 158
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 65/173 (37%), Gaps = 39/173 (22%)
Query: 479 ASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDL 538
ASD +LGQG FGQV + + +K++ +E+
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLST---------------- 48
Query: 539 GSHGLINNLHCFSQVAVLRSLHHHNVIRF-------------IGVLYKDRKLNLVTEYIA 585
S+V +L SL+H V+R+ + + K L + EY
Sbjct: 49 ----------ILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCE 98
Query: 586 GGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
GTL +L+ + R I ++Y+HS +IHRDL N + E
Sbjct: 99 NGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDE 151
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 69/153 (45%), Gaps = 23/153 (15%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
+G G FG+V V H ETG +K L KQ ++ L +
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKIL--------------DKQKVVKLKQIE-------- 86
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
H ++ +L++++ +++ + L +V EY+ GG + L+ G+ R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF- 145
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
+A I YLHS++LI+RDL +N L+ + G
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG 178
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 74/166 (44%), Gaps = 28/166 (16%)
Query: 477 FRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLI 536
+ D + LG G G V++V+H+ +G VM K LI
Sbjct: 6 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARK-----------------------LI 42
Query: 537 DLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP 596
L I N ++ VL + ++ F G Y D ++++ E++ GG+L ++L+
Sbjct: 43 HLEIKPAIRN-QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA 101
Query: 597 GQ-PLPWGQRVNFARDIAAGMTYLHSMN-LIHRDLNSQNCLVREVG 640
G+ P +V+ A + G+TYL + ++HRD+ N LV G
Sbjct: 102 GRIPEQILGKVSIA--VIKGLTYLREKHKIMHRDVKPSNILVNSRG 145
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 552 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 611
+V++LR + HHNVI V + L+ E ++GG L + L + L + +F +
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK-ESLSEEEATSFIKQ 123
Query: 612 IAAGMTYLHSMNLIHRDLNSQNCLV 636
I G+ YLH+ + H DL +N ++
Sbjct: 124 ILDGVNYLHTKKIAHFDLKPENIML 148
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 552 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 611
+V++LR + HHNVI V + L+ E ++GG L + L + L + +F +
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK-ESLSEEEATSFIKQ 123
Query: 612 IAAGMTYLHSMNLIHRDLNSQNCLV 636
I G+ YLH+ + H DL +N ++
Sbjct: 124 ILDGVNYLHTKKIAHFDLKPENIML 148
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 70/174 (40%), Gaps = 30/174 (17%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
+G G +G VY+ +G + LK + + L S
Sbjct: 17 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPIS------------------- 57
Query: 548 HCFSQVAVLRSLH---HHNVIRFIGVLYKDR-----KLNLVTEYIAGGTLKELLQDPGQP 599
+VA+LR L H NV+R + V R K+ LV E++ L + P
Sbjct: 58 -TVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPG 116
Query: 600 LPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGSG--FDFHLGQIY 651
LP + R G+ +LH+ ++HRDL +N LV G+ DF L +IY
Sbjct: 117 LPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIY 170
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 552 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 611
+V++LR + HHNVI V + L+ E ++GG L + L + L + +F +
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK-ESLSEEEATSFIKQ 123
Query: 612 IAAGMTYLHSMNLIHRDLNSQNCLV 636
I G+ YLH+ + H DL +N ++
Sbjct: 124 ILDGVNYLHTKKIAHFDLKPENIML 148
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 67/153 (43%), Gaps = 23/153 (15%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LG G FG+V+ + R G +K L +K + KQ
Sbjct: 14 LGTGSFGRVHLIRSRHNGRYYAMKVL-------KKEIVVRLKQVE--------------- 51
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
H + +L + H +IR G +++ ++ +YI GG L LL+ Q P
Sbjct: 52 HTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRK-SQRFPNPVAKF 110
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
+A ++ + YLHS ++I+RDL +N L+ + G
Sbjct: 111 YAAEVCLALEYLHSKDIIYRDLKPENILLDKNG 143
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 552 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 611
+V++LR + HHNVI V + L+ E ++GG L + L + L + +F +
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK-ESLSEEEATSFIKQ 123
Query: 612 IAAGMTYLHSMNLIHRDLNSQNCLV 636
I G+ YLH+ + H DL +N ++
Sbjct: 124 ILDGVNYLHTKKIAHFDLKPENIML 148
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 69/153 (45%), Gaps = 23/153 (15%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LG G FG+V V H ETG +K L KQ ++ L ++
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKIL--------------DKQKVVKLKEIE-------- 86
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
H ++ +L++++ +++ + L +V EY GG + L+ G+ R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF- 145
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
+A I YLHS++LI+RDL +N ++ + G
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQG 178
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 70/150 (46%), Gaps = 26/150 (17%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
+G+G +G V++ +R+TG+++ +K+ FL+ +I I L
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKK-----------FLESEDDPVIKKIAL--------- 50
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-DPGQPLPWGQRV 606
++ +L+ L H N++ + V + R+L+LV EY L EL + G P + +
Sbjct: 51 ---REIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSI 107
Query: 607 NFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
+ + + H N IHRD+ +N L+
Sbjct: 108 TWQ--TLQAVNFCHKHNCIHRDVKPENILI 135
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 552 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 611
+V++LR + HHNVI V + L+ E ++GG L + L + L + +F +
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK-ESLSEEEATSFIKQ 123
Query: 612 IAAGMTYLHSMNLIHRDLNSQNCLV 636
I G+ YLH+ + H DL +N ++
Sbjct: 124 ILDGVNYLHTKKIAHFDLKPENIML 148
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 74/170 (43%), Gaps = 29/170 (17%)
Query: 477 FRASDLVRGPLLGQGFFGQVYRVTHRETG-EVMVLKELYRVDEEAEKNFLKESKQGLIYL 535
F ++L G LG G FG+V T G E VLK ++ + KE+
Sbjct: 35 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEA------- 87
Query: 536 IDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTL------ 589
L++ L S + H N++ +G + ++TEY G L
Sbjct: 88 -------LMSELKIMSHLG-----QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRR 135
Query: 590 ---KELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
+L ++ G+PL ++F+ +A GM +L S N IHRD+ ++N L+
Sbjct: 136 KAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLL 185
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 69/153 (45%), Gaps = 23/153 (15%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
+G G FG+V V H ETG +K L KQ ++ L +
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKIL--------------DKQKVVKLKQIE-------- 86
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
H ++ +L++++ +++ + L +V EY+ GG + L+ G+ R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARF- 145
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
+A I YLHS++LI+RDL +N L+ + G
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG 178
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 69/153 (45%), Gaps = 23/153 (15%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LG G FG+V V H ETG +K L KQ ++ L ++
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKIL--------------DKQKVVKLKEIE-------- 86
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
H ++ +L++++ +++ + L +V EY GG + L+ G+ R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF- 145
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
+A I YLHS++LI+RDL +N ++ + G
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQG 178
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 69/153 (45%), Gaps = 23/153 (15%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
+G G FG+V V H ETG +K L KQ ++ L +
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKIL--------------DKQKVVKLKQIE-------- 86
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
H ++ +L++++ +++ + L +V EY+ GG + L+ G+ R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARF- 145
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
+A I YLHS++LI+RDL +N L+ + G
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG 178
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 552 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 611
+V++L+ + H NVI V + L+ E +AGG L + L + + L + F +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK-ESLTEEEATEFLKQ 122
Query: 612 IAAGMTYLHSMNLIHRDLNSQNCLV 636
I G+ YLHS+ + H DL +N ++
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIML 147
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 74/170 (43%), Gaps = 29/170 (17%)
Query: 477 FRASDLVRGPLLGQGFFGQVYRVTHRETG-EVMVLKELYRVDEEAEKNFLKESKQGLIYL 535
F ++L G LG G FG+V T G E VLK ++ + KE+
Sbjct: 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEA------- 95
Query: 536 IDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTL------ 589
L++ L S + H N++ +G + ++TEY G L
Sbjct: 96 -------LMSELKIMSHLG-----QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRR 143
Query: 590 ---KELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
+L ++ G+PL ++F+ +A GM +L S N IHRD+ ++N L+
Sbjct: 144 KAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLL 193
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 552 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 611
+V++L+ + H NVI V + L+ E +AGG L + L + + L + F +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK-ESLTEEEATEFLKQ 122
Query: 612 IAAGMTYLHSMNLIHRDLNSQNCLV 636
I G+ YLHS+ + H DL +N ++
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIML 147
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 68/153 (44%), Gaps = 23/153 (15%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LG G FG+V V H ETG +K L KQ ++ L +
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKIL--------------DKQKVVKLKQIE-------- 86
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
H ++ +L++++ +++ + L +V EY GG + L+ G+ R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARF- 145
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
+A I YLHS++LI+RDL +N ++ + G
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQG 178
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 552 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 611
+V++L+ + H NVI V + L+ E +AGG L + L + + L + F +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK-ESLTEEEATEFLKQ 122
Query: 612 IAAGMTYLHSMNLIHRDLNSQNCLV 636
I G+ YLHS+ + H DL +N ++
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIML 147
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 552 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 611
+V++L+ + H NVI V + L+ E +AGG L + L + + L + F +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK-ESLTEEEATEFLKQ 122
Query: 612 IAAGMTYLHSMNLIHRDLNSQNCLV 636
I G+ YLHS+ + H DL +N ++
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIML 147
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 552 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 611
+V++L+ + H NVI V + L+ E +AGG L + L + + L + F +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK-ESLTEEEATEFLKQ 122
Query: 612 IAAGMTYLHSMNLIHRDLNSQNCLV 636
I G+ YLHS+ + H DL +N ++
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIML 147
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 552 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 611
+V++L+ + H NVI V + L+ E +AGG L + L + + L + F +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE-KESLTEEEATEFLKQ 122
Query: 612 IAAGMTYLHSMNLIHRDLNSQNCLV 636
I G+ YLHS+ + H DL +N ++
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIML 147
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 552 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 611
+V++L+ + H NVI V + L+ E +AGG L + L + + L + F +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK-ESLTEEEATEFLKQ 122
Query: 612 IAAGMTYLHSMNLIHRDLNSQNCLV 636
I G+ YLHS+ + H DL +N ++
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIML 147
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 552 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 611
+V++L+ + H NVI V + L+ E +AGG L + L + + L + F +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE-KESLTEEEATEFLKQ 122
Query: 612 IAAGMTYLHSMNLIHRDLNSQNCLV 636
I G+ YLHS+ + H DL +N ++
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIML 147
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 552 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 611
+V++L+ + H NVI V + L+ E +AGG L + L + + L + F +
Sbjct: 63 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK-ESLTEEEATEFLKQ 121
Query: 612 IAAGMTYLHSMNLIHRDLNSQNCLV 636
I G+ YLHS+ + H DL +N ++
Sbjct: 122 ILNGVYYLHSLQIAHFDLKPENIML 146
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 552 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 611
+V++L+ + H NVI V + L+ E +AGG L + L + + L + F +
Sbjct: 63 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE-KESLTEEEATEFLKQ 121
Query: 612 IAAGMTYLHSMNLIHRDLNSQNCLV 636
I G+ YLHS+ + H DL +N ++
Sbjct: 122 ILNGVYYLHSLQIAHFDLKPENIML 146
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 552 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 611
+V++L+ + H NVI V + L+ E +AGG L + L + + L + F +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK-ESLTEEEATEFLKQ 122
Query: 612 IAAGMTYLHSMNLIHRDLNSQNCLV 636
I G+ YLHS+ + H DL +N ++
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIML 147
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 552 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 611
+V++L+ + H NVI V + L+ E +AGG L + L + + L + F +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEK-ESLTEEEATEFLKQ 122
Query: 612 IAAGMTYLHSMNLIHRDLNSQNCLV 636
I G+ YLHS+ + H DL +N ++
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIML 147
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 552 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 611
+V++L+ + H NVI V + L+ E +AGG L + L + + L + F +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE-KESLTEEEATEFLKQ 122
Query: 612 IAAGMTYLHSMNLIHRDLNSQNCLV 636
I G+ YLHS+ + H DL +N ++
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIML 147
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 58/136 (42%), Gaps = 13/136 (9%)
Query: 516 VDEEAEKNFLKESKQGLIYLIDLG-------------SHGLINNLHCFSQVAVLRSLHHH 562
V + +E F++E G L+ LG G ++ + V+ L H
Sbjct: 6 VIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHP 65
Query: 563 NVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSM 622
+++ GV + + LV E++ G L + L+ + D+ GM YL
Sbjct: 66 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 125
Query: 623 NLIHRDLNSQNCLVRE 638
+IHRDL ++NCLV E
Sbjct: 126 CVIHRDLAARNCLVGE 141
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 58/136 (42%), Gaps = 13/136 (9%)
Query: 516 VDEEAEKNFLKESKQGLIYLIDLG-------------SHGLINNLHCFSQVAVLRSLHHH 562
V + +E F++E G L+ LG G ++ + V+ L H
Sbjct: 1 VIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHP 60
Query: 563 NVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSM 622
+++ GV + + LV E++ G L + L+ + D+ GM YL
Sbjct: 61 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 120
Query: 623 NLIHRDLNSQNCLVRE 638
+IHRDL ++NCLV E
Sbjct: 121 CVIHRDLAARNCLVGE 136
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 58/136 (42%), Gaps = 13/136 (9%)
Query: 516 VDEEAEKNFLKESKQGLIYLIDLG-------------SHGLINNLHCFSQVAVLRSLHHH 562
V + +E F++E G L+ LG G ++ + V+ L H
Sbjct: 3 VIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHP 62
Query: 563 NVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSM 622
+++ GV + + LV E++ G L + L+ + D+ GM YL
Sbjct: 63 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 122
Query: 623 NLIHRDLNSQNCLVRE 638
+IHRDL ++NCLV E
Sbjct: 123 CVIHRDLAARNCLVGE 138
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 79/170 (46%), Gaps = 27/170 (15%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
+G+G +G VY+ + GE LK++ R+++E E G+ +
Sbjct: 10 IGEGTYGVVYKAQNN-YGETFALKKI-RLEKEDE--------------------GIPST- 46
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
++++L+ L H N+++ V++ ++L LV E++ LK+LL L +
Sbjct: 47 -TIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKS 104
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS--GFDFHLGQIYLIYV 655
F + G+ Y H ++HRDL QN L+ G DF L + + I V
Sbjct: 105 FLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPV 154
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 552 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 611
+V++L+ + H NVI V + L+ E +AGG L + L + + L + F +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK-ESLTEEEATEFLKQ 122
Query: 612 IAAGMTYLHSMNLIHRDLNSQNCLV 636
I G+ YLHS+ + H DL +N ++
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIML 147
>pdb|2XQN|T Chain T, Complex Of The 2nd And 3rd Lim Domains Of Tes With The
Evh1 Domain Of Mena And The N-Terminal Domain Of
Actin-Like Protein Arp7a
Length = 126
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 60/130 (46%), Gaps = 10/130 (7%)
Query: 4 SETPEILTCAGCLNNIVEDEYVQALSQEWHTDCFRCSACDVML-DNWYFEKDGLLFCKED 62
SE P CAGC I +EY QA +Q WH F C CD +L Y + CK
Sbjct: 1 SEKPR---CAGCDELIFSNEYTQAENQNWHLKHFCCFDCDSILAGEIYVMVNDKPVCKPC 57
Query: 63 YNGKYGEACQNCGQMMSGPVMVVGDHKF----HPECFKCTSCSCCIGDGESYALVERSIL 118
Y + CQ C + V V + F ECF C+ CS C+ G+ + VE ++
Sbjct: 58 YVKNHAVVCQGCHNAIDPEVQRVTYNNFSWHASTECFLCSCCSKCL-IGQKFMPVE-GMV 115
Query: 119 YCGLCYKRQM 128
+C + K++M
Sbjct: 116 FCSVECKKRM 125
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Query: 552 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 611
+V + SL H N+IR GV+ + +VTE G+L + L+ G +A
Sbjct: 71 EVNAMHSLDHRNLIRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQ 129
Query: 612 IAAGMTYLHSMNLIHRDLNSQNCLV 636
+A GM YL S IHRDL ++N L+
Sbjct: 130 VAEGMGYLESKRFIHRDLAARNLLL 154
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 79/170 (46%), Gaps = 27/170 (15%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
+G+G +G VY+ + GE LK++ R+++E E G+ +
Sbjct: 10 IGEGTYGVVYKAQNN-YGETFALKKI-RLEKEDE--------------------GIPST- 46
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
++++L+ L H N+++ V++ ++L LV E++ LK+LL L +
Sbjct: 47 -TIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKS 104
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS--GFDFHLGQIYLIYV 655
F + G+ Y H ++HRDL QN L+ G DF L + + I V
Sbjct: 105 FLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPV 154
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 79/170 (46%), Gaps = 27/170 (15%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
+G+G +G VY+ + GE LK++ R+++E E G+ +
Sbjct: 10 IGEGTYGVVYKAQNN-YGETFALKKI-RLEKEDE--------------------GIPST- 46
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
++++L+ L H N+++ V++ ++L LV E++ LK+LL L +
Sbjct: 47 -TIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKS 104
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS--GFDFHLGQIYLIYV 655
F + G+ Y H ++HRDL QN L+ G DF L + + I V
Sbjct: 105 FLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPV 154
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Query: 552 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 611
+V + SL H N+IR GV+ + +VTE G+L + L+ G +A
Sbjct: 61 EVNAMHSLDHRNLIRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQ 119
Query: 612 IAAGMTYLHSMNLIHRDLNSQNCLV 636
+A GM YL S IHRDL ++N L+
Sbjct: 120 VAEGMGYLESKRFIHRDLAARNLLL 144
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Query: 552 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 611
+V + SL H N+IR GV+ + +VTE G+L + L+ G +A
Sbjct: 71 EVNAMHSLDHRNLIRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQ 129
Query: 612 IAAGMTYLHSMNLIHRDLNSQNCLV 636
+A GM YL S IHRDL ++N L+
Sbjct: 130 VAEGMGYLESKRFIHRDLAARNLLL 154
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Query: 552 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 611
+V + SL H N+IR GV+ + +VTE G+L + L+ G +A
Sbjct: 61 EVNAMHSLDHRNLIRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQ 119
Query: 612 IAAGMTYLHSMNLIHRDLNSQNCLV 636
+A GM YL S IHRDL ++N L+
Sbjct: 120 VAEGMGYLESKRFIHRDLAARNLLL 144
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Query: 552 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 611
+V + SL H N+IR GV+ + +VTE G+L + L+ G +A
Sbjct: 61 EVNAMHSLDHRNLIRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQ 119
Query: 612 IAAGMTYLHSMNLIHRDLNSQNCLV 636
+A GM YL S IHRDL ++N L+
Sbjct: 120 VAEGMGYLESKRFIHRDLAARNLLL 144
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Query: 552 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 611
+V + SL H N+IR GV+ + +VTE G+L + L+ G +A
Sbjct: 65 EVNAMHSLDHRNLIRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQ 123
Query: 612 IAAGMTYLHSMNLIHRDLNSQNCLV 636
+A GM YL S IHRDL ++N L+
Sbjct: 124 VAEGMGYLESKRFIHRDLAARNLLL 148
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 68/153 (44%), Gaps = 23/153 (15%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LG G FG+V V H ETG +K L KQ ++ L +
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKIL--------------DKQKVVKLKQIE-------- 86
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
H ++ +L++++ +++ + L +V EY GG + L+ G+ R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF- 145
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
+A I YLHS++LI+RDL +N ++ + G
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQG 178
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Query: 552 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 611
+V + SL H N+IR GV+ + +VTE G+L + L+ G +A
Sbjct: 65 EVNAMHSLDHRNLIRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQ 123
Query: 612 IAAGMTYLHSMNLIHRDLNSQNCLV 636
+A GM YL S IHRDL ++N L+
Sbjct: 124 VAEGMGYLESKRFIHRDLAARNLLL 148
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 68/153 (44%), Gaps = 23/153 (15%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LG G FG+V V H ETG +K L KQ ++ L +
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKIL--------------DKQKVVKLKQIE-------- 86
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
H ++ +L++++ +++ + L +V EY GG + L+ G+ R
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF- 145
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
+A I YLHS++LI+RDL +N ++ + G
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQG 178
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 7/96 (7%)
Query: 545 NNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQ 604
+N +VAVL+ L H N+++ R LV E GG EL + + + +
Sbjct: 79 SNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGG---ELFDEIIHRMKFNE 135
Query: 605 RVNFA---RDIAAGMTYLHSMNLIHRDLNSQNCLVR 637
V+ A + + +G+TYLH N++HRDL +N L+
Sbjct: 136 -VDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLE 170
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 70/153 (45%), Gaps = 28/153 (18%)
Query: 487 LLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINN 546
+LGQG V+R H++TG++ +K + +FL+ +D+
Sbjct: 16 ILGQGATANVFRGRHKKTGDLFAIKVFNNI------SFLRP--------VDV-------- 53
Query: 547 LHCFSQVAVLRSLHHHNVIRFIGVLYKD--RKLNLVTEYIAGGTLKELLQDPGQP--LPW 602
+ VL+ L+H N+++ + + R L+ E+ G+L +L++P LP
Sbjct: 54 --QMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPE 111
Query: 603 GQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCL 635
+ + RD+ GM +L ++HR++ N +
Sbjct: 112 SEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIM 144
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 3/93 (3%)
Query: 545 NNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTL-KELLQDPGQPLPWG 603
N+ +VAVL+ L H N+++ R LV E GG L E++ Q
Sbjct: 64 NSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILR--QKFSEV 121
Query: 604 QRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
+ + +G TYLH N++HRDL +N L+
Sbjct: 122 DAAVIMKQVLSGTTYLHKHNIVHRDLKPENLLL 154
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 3/100 (3%)
Query: 552 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 611
+ ++ L + ++R IGV + L LV E GG L + L + +P
Sbjct: 60 EAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQ 118
Query: 612 IAAGMTYLHSMNLIHRDLNSQNCLV--REVGSGFDFHLGQ 649
++ GM YL N +HRDL ++N L+ R DF L +
Sbjct: 119 VSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSK 158
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 68/153 (44%), Gaps = 23/153 (15%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LG G FG+V V H+ETG +K L KQ ++ L +
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKIL--------------DKQKVVKLKQIE-------- 87
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
H ++ + ++++ +++ + L +V EY GG + L+ G+ R
Sbjct: 88 HTLNEKRIQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARF- 146
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
+A I YLHS++LI+RDL +N L+ + G
Sbjct: 147 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG 179
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 65/164 (39%), Gaps = 34/164 (20%)
Query: 479 ASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDL 538
+SD LLG+G +G V TH+ TGE++ +K++ D+
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKP------------------- 50
Query: 539 GSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQ 598
+ L ++ +L+ H N+I + D N YI ++EL+Q
Sbjct: 51 -----LFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYI----IQELMQTDLH 101
Query: 599 PLPWGQRVN------FARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
+ Q ++ F + LH N+IHRDL N L+
Sbjct: 102 RVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLI 145
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 70/153 (45%), Gaps = 28/153 (18%)
Query: 487 LLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINN 546
+LGQG V+R H++TG++ +K + +FL+ +D+
Sbjct: 16 ILGQGATANVFRGRHKKTGDLFAIKVFNNI------SFLRP--------VDV-------- 53
Query: 547 LHCFSQVAVLRSLHHHNVIRFIGVLYKD--RKLNLVTEYIAGGTLKELLQDPGQP--LPW 602
+ VL+ L+H N+++ + + R L+ E+ G+L +L++P LP
Sbjct: 54 --QMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPE 111
Query: 603 GQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCL 635
+ + RD+ GM +L ++HR++ N +
Sbjct: 112 SEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIM 144
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 3/94 (3%)
Query: 545 NNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTL-KELLQDPGQPLPWG 603
N+ +VAVL+ L H N+++ R LV E GG L E++ Q
Sbjct: 47 NSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEII--LRQKFSEV 104
Query: 604 QRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVR 637
+ + +G TYLH N++HRDL +N L+
Sbjct: 105 DAAVIMKQVLSGTTYLHKHNIVHRDLKPENLLLE 138
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 67/153 (43%), Gaps = 23/153 (15%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LG G FG+V V H ETG +K L KQ ++ L +
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKIL--------------DKQKVVKLKQIE-------- 87
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
H ++ +L++++ + + + L +V EY GG + L+ G+ R
Sbjct: 88 HTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARF- 146
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
+A I YLHS++LI+RDL +N ++ + G
Sbjct: 147 YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQG 179
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 65/164 (39%), Gaps = 34/164 (20%)
Query: 479 ASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDL 538
+SD LLG+G +G V TH+ TGE++ +K++ D+
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKP------------------- 50
Query: 539 GSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQ 598
+ L ++ +L+ H N+I + D N YI ++EL+Q
Sbjct: 51 -----LFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYI----IQELMQTDLH 101
Query: 599 PLPWGQRVN------FARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
+ Q ++ F + LH N+IHRDL N L+
Sbjct: 102 RVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLI 145
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 65/164 (39%), Gaps = 34/164 (20%)
Query: 479 ASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDL 538
+SD LLG+G +G V TH+ TGE++ +K++ D+
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKP------------------- 50
Query: 539 GSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQ 598
+ L ++ +L+ H N+I + D N YI ++EL+Q
Sbjct: 51 -----LFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYI----IQELMQTDLH 101
Query: 599 PLPWGQRVN------FARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
+ Q ++ F + LH N+IHRDL N L+
Sbjct: 102 RVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLI 145
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 65/151 (43%), Gaps = 26/151 (17%)
Query: 487 LLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINN 546
+LG+G FG+V + R T + +K +I+ S +
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVK-----------------------VINKASAKNKDT 65
Query: 547 LHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTL-KELLQDPGQPLPWGQR 605
+V +L+ L H N+++ +L +V E GG L E+++ R
Sbjct: 66 STILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAAR 125
Query: 606 VNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
+ + + +G+TY+H N++HRDL +N L+
Sbjct: 126 I--IKQVFSGITYMHKHNIVHRDLKPENILL 154
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 73/160 (45%), Gaps = 24/160 (15%)
Query: 483 VRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHG 542
VR +G+G FG+ V E G V+KE+ + + K +ES++
Sbjct: 27 VRLQKIGEGSFGKAILVKSTEDGRQYVIKEI-NISRMSSKE-REESRR------------ 72
Query: 543 LINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTL-KELLQDPGQPLP 601
+VAVL ++ H N++++ ++ L +V +Y GG L K + G
Sbjct: 73 ---------EVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQ 123
Query: 602 WGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS 641
Q +++ I + ++H ++HRD+ SQN + + G+
Sbjct: 124 EDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGT 163
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 65/151 (43%), Gaps = 26/151 (17%)
Query: 487 LLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINN 546
+LG+G FG+V + R T + +K +I+ S +
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVK-----------------------VINKASAKNKDT 65
Query: 547 LHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTL-KELLQDPGQPLPWGQR 605
+V +L+ L H N+++ +L +V E GG L E+++ R
Sbjct: 66 STILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAAR 125
Query: 606 VNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
+ + + +G+TY+H N++HRDL +N L+
Sbjct: 126 I--IKQVFSGITYMHKHNIVHRDLKPENILL 154
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 64/151 (42%), Gaps = 24/151 (15%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LG+G FG+V H TG+ + LK + + K K QG I
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALKIINK------KVLAKSDMQGRIE------------- 61
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
+++ LR L H ++I+ V+ ++ +V EY ++Q +R
Sbjct: 62 ---REISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARR-- 116
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
F + I + + Y H ++HRDL +N L+ E
Sbjct: 117 FFQQIISAVEYCHRHKIVHRDLKPENLLLDE 147
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 65/151 (43%), Gaps = 26/151 (17%)
Query: 487 LLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINN 546
+LG+G FG+V + R T + +K +I+ S +
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVK-----------------------VINKASAKNKDT 65
Query: 547 LHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTL-KELLQDPGQPLPWGQR 605
+V +L+ L H N+++ +L +V E GG L E+++ R
Sbjct: 66 STILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAAR 125
Query: 606 VNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
+ + + +G+TY+H N++HRDL +N L+
Sbjct: 126 I--IKQVFSGITYMHKHNIVHRDLKPENILL 154
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 64/151 (42%), Gaps = 24/151 (15%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LG+G FG+V H TG+ + LK + + K K QG I
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALKIINK------KVLAKSDMQGRIE------------- 52
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
+++ LR L H ++I+ V+ ++ +V EY ++Q +R
Sbjct: 53 ---REISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARR-- 107
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
F + I + + Y H ++HRDL +N L+ E
Sbjct: 108 FFQQIISAVEYCHRHKIVHRDLKPENLLLDE 138
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 70/170 (41%), Gaps = 29/170 (17%)
Query: 470 EASKSRIFRASDLVR----GPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFL 525
E+S S +A D+ + LG G F +V + TG++ +K + K L
Sbjct: 8 ESSSSWKKQAEDIKKIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCI-------PKKAL 60
Query: 526 KESKQGLIYLIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIA 585
K G I N ++AVLR + H N++ + L LV + ++
Sbjct: 61 K------------GKESSIEN-----EIAVLRKIKHENIVALEDIYESPNHLYLVMQLVS 103
Query: 586 GGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCL 635
GG L + + + G R + + YLH M ++HRDL +N L
Sbjct: 104 GGELFDRIVEKGFYTE-KDASTLIRQVLDAVYYLHRMGIVHRDLKPENLL 152
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 64/151 (42%), Gaps = 24/151 (15%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LG+G FG+V H TG+ + LK + + K K QG I
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALKIINK------KVLAKSDMQGRIE------------- 62
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
+++ LR L H ++I+ V+ ++ +V EY ++Q +R
Sbjct: 63 ---REISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARR-- 117
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
F + I + + Y H ++HRDL +N L+ E
Sbjct: 118 FFQQIISAVEYCHRHKIVHRDLKPENLLLDE 148
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 64/151 (42%), Gaps = 24/151 (15%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LG+G FG+V H TG+ + LK + + K K QG I
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALKIINK------KVLAKSDMQGRIE------------- 56
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
+++ LR L H ++I+ V+ ++ +V EY ++Q +R
Sbjct: 57 ---REISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARR-- 111
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
F + I + + Y H ++HRDL +N L+ E
Sbjct: 112 FFQQIISAVEYCHRHKIVHRDLKPENLLLDE 142
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 67/153 (43%), Gaps = 23/153 (15%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LG G FG+V V H ETG +K L KQ ++ L +
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKIL--------------DKQKVVKLKQIE-------- 87
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
H ++ +L++++ + + + L +V EY GG + L+ G+ R
Sbjct: 88 HTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF- 146
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
+A I YLHS++LI+RDL +N ++ + G
Sbjct: 147 YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQG 179
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 67/153 (43%), Gaps = 23/153 (15%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LG G FG+V V H ETG +K L KQ ++ L +
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKIL--------------DKQKVVKLKQIE-------- 87
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
H ++ +L++++ + + + L +V EY GG + L+ G+ R
Sbjct: 88 HTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF- 146
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
+A I YLHS++LI+RDL +N ++ + G
Sbjct: 147 YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQG 179
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 74/183 (40%), Gaps = 42/183 (22%)
Query: 477 FRASDLVRGPLLGQGFFGQVYRVTHRETG-EVMVLKELYRVDEEAEKNFLKESKQGLIYL 535
F ++L G LG G FG+V T G E VLK ++ + KE+
Sbjct: 28 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEA------- 80
Query: 536 IDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELL-- 593
L++ L S + H N++ +G + ++TEY G L L
Sbjct: 81 -------LMSELKIMSHLG-----QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRR 128
Query: 594 -------------QDP-------GQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQN 633
QDP G+PL ++F+ +A GM +L S N IHRD+ ++N
Sbjct: 129 KAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARN 188
Query: 634 CLV 636
L+
Sbjct: 189 VLL 191
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 66/151 (43%), Gaps = 24/151 (15%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LG+G FG+V TH +T + + LK + R LK+S ++
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISR-------QLLKKSDM---------------HM 54
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
+++ L+ L H ++I+ V+ + +V EY G +++ G+R
Sbjct: 55 RVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYAGGELFDYIVEKKRMTEDEGRR-- 112
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
F + I + Y H ++HRDL +N L+ +
Sbjct: 113 FFQQIICAIEYCHRHKIVHRDLKPENLLLDD 143
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 549 CFS----QVAVLR-SLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWG 603
CFS +V +LR S H NVIR+ KDR+ + + TL+E ++
Sbjct: 60 CFSFADREVQLLRESDEHPNVIRYF-CTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGL 118
Query: 604 QRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
+ + + +G+ +LHS+N++HRDL N L+
Sbjct: 119 EPITLLQQTTSGLAHLHSLNIVHRDLKPHNILI 151
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 76/177 (42%), Gaps = 28/177 (15%)
Query: 466 SFRVEASKSRIFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFL 525
+F + +K + D R LG G G V +V HR +G +M K
Sbjct: 2 AFLTQKAKVGELKDDDFERISELGAGNGGVVTKVQHRPSGLIMARK-------------- 47
Query: 526 KESKQGLIYLIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIA 585
LI L I N ++ VL + ++ F G Y D ++++ E++
Sbjct: 48 ---------LIHLEIKPAIRN-QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMD 97
Query: 586 GGTLKELLQDPGQ-PLPWGQRVNFARDIAAGMTYLHSMN-LIHRDLNSQNCLVREVG 640
GG+L ++L++ + P +V+ A + G+ YL + ++HRD+ N LV G
Sbjct: 98 GGSLDQVLKEAKRIPEEILGKVSIA--VLRGLAYLREKHQIMHRDVKPSNILVNSRG 152
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Query: 555 VLRSLHHHNVIRFIGVLYKDRKLNLVT-EYIAGGTLKELLQDPGQPLPWGQRVNFARDIA 613
+++ H NV+ +G+ + LV Y+ G L+ +++ + F +A
Sbjct: 76 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVA 135
Query: 614 AGMTYLHSMNLIHRDLNSQNCLVRE 638
GM YL S +HRDL ++NC++ E
Sbjct: 136 KGMKYLASKKFVHRDLAARNCMLDE 160
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 74/165 (44%), Gaps = 25/165 (15%)
Query: 478 RASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKE---LYRVDEEAEKNFLKESKQGLIY 534
R DL+ LGQG F ++++ RE G+ L E L +V ++A +N+ +
Sbjct: 6 RNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSES------- 58
Query: 535 LIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ 594
F +++ L H +++ GV + LV E++ G+L L+
Sbjct: 59 --------------FFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLK 104
Query: 595 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNC-LVRE 638
+ ++ A+ +AA M +L LIH ++ ++N L+RE
Sbjct: 105 KNKNCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIRE 149
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Query: 555 VLRSLHHHNVIRFIGVLYKDRKLNLVT-EYIAGGTLKELLQDPGQPLPWGQRVNFARDIA 613
+++ H NV+ +G+ + LV Y+ G L+ +++ + F +A
Sbjct: 102 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVA 161
Query: 614 AGMTYLHSMNLIHRDLNSQNCLVRE 638
GM YL S +HRDL ++NC++ E
Sbjct: 162 KGMKYLASKKFVHRDLAARNCMLDE 186
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Query: 555 VLRSLHHHNVIRFIGVLYKDRKLNLVT-EYIAGGTLKELLQDPGQPLPWGQRVNFARDIA 613
+++ H NV+ +G+ + LV Y+ G L+ +++ + F +A
Sbjct: 83 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVA 142
Query: 614 AGMTYLHSMNLIHRDLNSQNCLVRE 638
GM YL S +HRDL ++NC++ E
Sbjct: 143 KGMKYLASKKFVHRDLAARNCMLDE 167
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Query: 552 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 611
+V +LR + H N+I + + L+ E ++GG L + L + + L + F +
Sbjct: 65 EVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEK-ESLTEDEATQFLKQ 123
Query: 612 IAAGMTYLHSMNLIHRDLNSQNCLV 636
I G+ YLHS + H DL +N ++
Sbjct: 124 ILDGVHYLHSKRIAHFDLKPENIML 148
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Query: 555 VLRSLHHHNVIRFIGVLYKDRKLNLVT-EYIAGGTLKELLQDPGQPLPWGQRVNFARDIA 613
+++ H NV+ +G+ + LV Y+ G L+ +++ + F +A
Sbjct: 81 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVA 140
Query: 614 AGMTYLHSMNLIHRDLNSQNCLVRE 638
GM YL S +HRDL ++NC++ E
Sbjct: 141 KGMKYLASKKFVHRDLAARNCMLDE 165
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Query: 555 VLRSLHHHNVIRFIGVLYKDRKLNLVT-EYIAGGTLKELLQDPGQPLPWGQRVNFARDIA 613
+++ H NV+ +G+ + LV Y+ G L+ +++ + F +A
Sbjct: 103 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVA 162
Query: 614 AGMTYLHSMNLIHRDLNSQNCLVRE 638
GM YL S +HRDL ++NC++ E
Sbjct: 163 KGMKYLASKKFVHRDLAARNCMLDE 187
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Query: 555 VLRSLHHHNVIRFIGVLYKDRKLNLVT-EYIAGGTLKELLQDPGQPLPWGQRVNFARDIA 613
+++ H NV+ +G+ + LV Y+ G L+ +++ + F +A
Sbjct: 84 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVA 143
Query: 614 AGMTYLHSMNLIHRDLNSQNCLVRE 638
GM YL S +HRDL ++NC++ E
Sbjct: 144 KGMKYLASKKFVHRDLAARNCMLDE 168
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Query: 555 VLRSLHHHNVIRFIGVLYKDRKLNLVT-EYIAGGTLKELLQDPGQPLPWGQRVNFARDIA 613
+++ H NV+ +G+ + LV Y+ G L+ +++ + F +A
Sbjct: 82 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVA 141
Query: 614 AGMTYLHSMNLIHRDLNSQNCLVRE 638
GM YL S +HRDL ++NC++ E
Sbjct: 142 KGMKYLASKKFVHRDLAARNCMLDE 166
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Query: 555 VLRSLHHHNVIRFIGVLYKDRKLNLVT-EYIAGGTLKELLQDPGQPLPWGQRVNFARDIA 613
+++ H NV+ +G+ + LV Y+ G L+ +++ + F +A
Sbjct: 83 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVA 142
Query: 614 AGMTYLHSMNLIHRDLNSQNCLVRE 638
GM YL S +HRDL ++NC++ E
Sbjct: 143 KGMKYLASKKFVHRDLAARNCMLDE 167
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Query: 555 VLRSLHHHNVIRFIGVLYKDRKLNLVT-EYIAGGTLKELLQDPGQPLPWGQRVNFARDIA 613
+++ H NV+ +G+ + LV Y+ G L+ +++ + F +A
Sbjct: 79 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVA 138
Query: 614 AGMTYLHSMNLIHRDLNSQNCLVRE 638
GM YL S +HRDL ++NC++ E
Sbjct: 139 KGMKYLASKKFVHRDLAARNCMLDE 163
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Query: 555 VLRSLHHHNVIRFIGVLYKDRKLNLVT-EYIAGGTLKELLQDPGQPLPWGQRVNFARDIA 613
+++ H NV+ +G+ + LV Y+ G L+ +++ + F +A
Sbjct: 84 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVA 143
Query: 614 AGMTYLHSMNLIHRDLNSQNCLVRE 638
GM YL S +HRDL ++NC++ E
Sbjct: 144 KGMKYLASKKFVHRDLAARNCMLDE 168
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Query: 552 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 611
+V +LR + H N+I + + L+ E ++GG L + L + + L + F +
Sbjct: 58 EVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEK-ESLTEDEATQFLKQ 116
Query: 612 IAAGMTYLHSMNLIHRDLNSQNCLV 636
I G+ YLHS + H DL +N ++
Sbjct: 117 ILDGVHYLHSKRIAHFDLKPENIML 141
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 64/173 (36%), Gaps = 39/173 (22%)
Query: 479 ASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDL 538
ASD +LGQG FGQV + + +K++ +E+
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLST---------------- 48
Query: 539 GSHGLINNLHCFSQVAVLRSLHHHNVIRF-------------IGVLYKDRKLNLVTEYIA 585
S+V +L SL+H V+R+ + + K L + EY
Sbjct: 49 ----------ILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCE 98
Query: 586 GGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
TL +L+ + R I ++Y+HS +IHRDL N + E
Sbjct: 99 NRTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDE 151
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Query: 552 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 611
+V +LR + H N+I + + L+ E ++GG L + L + + L + F +
Sbjct: 79 EVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEK-ESLTEDEATQFLKQ 137
Query: 612 IAAGMTYLHSMNLIHRDLNSQNCLV 636
I G+ YLHS + H DL +N ++
Sbjct: 138 ILDGVHYLHSKRIAHFDLKPENIML 162
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 72/163 (44%), Gaps = 21/163 (12%)
Query: 475 RIFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIY 534
RI + ++ + +LG G FG VY+ GE +K + E E K +K+
Sbjct: 10 RILKETEFKKIKVLGSGAFGTVYKGLWIPEGEK--VKIPVAIKELREATSPKANKE---- 63
Query: 535 LIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ 594
+ V+ S+ + +V R +G+ + L+T+ + G L + ++
Sbjct: 64 --------------ILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVR 108
Query: 595 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVR 637
+ + +N+ IA GM YL L+HRDL ++N LV+
Sbjct: 109 EHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVK 151
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 72/166 (43%), Gaps = 28/166 (16%)
Query: 478 RASDLVRGPLLGQGFFGQVYRVTHRETG---EVMVLKELYRVDEEAEKNFLKESKQGLIY 534
+ SD ++G+G FG+V H+ V VL++ + ++ EK+ + E
Sbjct: 36 KPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERN----V 91
Query: 535 LIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ 594
L+ H + LH Q A KL V +YI GG L LQ
Sbjct: 92 LLKNVKHPFLVGLHFSFQTA--------------------DKLYFVLDYINGGELFYHLQ 131
Query: 595 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
L R +A +IA+ + YLHS+N+++RDL +N L+ G
Sbjct: 132 RERCFLEPRARF-YAAEIASALGYLHSLNIVYRDLKPENILLDSQG 176
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 72/163 (44%), Gaps = 21/163 (12%)
Query: 475 RIFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIY 534
RI + ++ + +LG G FG VY+ GE +K + E E K +K+
Sbjct: 10 RILKETEFKKIKVLGSGAFGTVYKGLWIPEGEK--VKIPVAIKELREATSPKANKE---- 63
Query: 535 LIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ 594
+ V+ S+ + +V R +G+ + L+T+ + G L + ++
Sbjct: 64 --------------ILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGXLLDYVR 108
Query: 595 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVR 637
+ + +N+ IA GM YL L+HRDL ++N LV+
Sbjct: 109 EHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVK 151
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 74/165 (44%), Gaps = 25/165 (15%)
Query: 478 RASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKE---LYRVDEEAEKNFLKESKQGLIY 534
R DL+ LGQG F ++++ RE G+ L E L +V ++A +N+ +
Sbjct: 6 RNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSES------- 58
Query: 535 LIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ 594
F +++ L H +++ GV + + LV E++ G+L L+
Sbjct: 59 --------------FFEAASMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLK 104
Query: 595 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNC-LVRE 638
+ ++ A+ +A M +L LIH ++ ++N L+RE
Sbjct: 105 KNKNCINILWKLEVAKQLAWAMHFLEENTLIHGNVCAKNILLIRE 149
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 73/163 (44%), Gaps = 21/163 (12%)
Query: 475 RIFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIY 534
RI + ++ + +LG G FG VY+ GE +K + E E K +K+ L
Sbjct: 4 RILKETEFKKIKVLGSGAFGTVYKGLWIPEGEK--VKIPVAIKELREATSPKANKEIL-- 59
Query: 535 LIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ 594
+ V+ S+ + +V R +G+ + L+T+ + G L + ++
Sbjct: 60 ----------------DEAYVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVR 102
Query: 595 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVR 637
+ + +N+ IA GM YL L+HRDL ++N LV+
Sbjct: 103 EHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVK 145
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 85/203 (41%), Gaps = 37/203 (18%)
Query: 442 RDAWYNSPPKSLRPACDLSRTRSRSFRVEASKSRIFRASDLVRGPLLGQGFFGQVYRVTH 501
+D +++ P + P L + + S R S F ++ LG+G FG+VY+
Sbjct: 6 QDHFFDVPAEE-DPEVHLGQLKRFSLRELQVASDNFSNKNI-----LGRGGFGKVYK-GR 58
Query: 502 RETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNLHCFSQVAVLRSLHH 561
G ++ +K L +E QG L ++V ++ H
Sbjct: 59 LADGTLVAVKRLK-----------EERXQG-------------GELQFQTEVEMISMAVH 94
Query: 562 HNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQ---PLPWGQRVNFARDIAAGMTY 618
N++R G + LV Y+A G++ L++ + PL W +R A A G+ Y
Sbjct: 95 RNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAY 154
Query: 619 LHSM---NLIHRDLNSQNCLVRE 638
LH +IHRD+ + N L+ E
Sbjct: 155 LHDHCDPKIIHRDVKAANILLDE 177
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 72/163 (44%), Gaps = 21/163 (12%)
Query: 475 RIFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIY 534
RI + ++ + +LG G FG VY+ GE +K + E E K +K+
Sbjct: 7 RILKETEFKKIKVLGSGAFGTVYKGLWIPEGEK--VKIPVAIKELREATSPKANKE---- 60
Query: 535 LIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ 594
+ V+ S+ + +V R +G+ + L+T+ + G L + ++
Sbjct: 61 --------------ILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVR 105
Query: 595 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVR 637
+ + +N+ IA GM YL L+HRDL ++N LV+
Sbjct: 106 EHKDNIGSQYLLNWCVQIAEGMNYLEDRRLVHRDLAARNVLVK 148
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 72/163 (44%), Gaps = 21/163 (12%)
Query: 475 RIFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIY 534
RI + ++ + +LG G FG VY+ GE +K + E E K +K+
Sbjct: 13 RILKETEFKKIKVLGSGAFGTVYKGLWIPEGEK--VKIPVAIKELREATSPKANKE---- 66
Query: 535 LIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ 594
+ V+ S+ + +V R +G+ + L+T+ + G L + ++
Sbjct: 67 --------------ILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVR 111
Query: 595 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVR 637
+ + +N+ IA GM YL L+HRDL ++N LV+
Sbjct: 112 EHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVK 154
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 72/163 (44%), Gaps = 21/163 (12%)
Query: 475 RIFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIY 534
RI + ++ + +LG G FG VY+ GE +K + E E K +K+
Sbjct: 13 RILKETEFKKIKVLGSGAFGTVYKGLWIPEGEK--VKIPVAIKELREATSPKANKE---- 66
Query: 535 LIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ 594
+ V+ S+ + +V R +G+ + L+T+ + G L + ++
Sbjct: 67 --------------ILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVR 111
Query: 595 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVR 637
+ + +N+ IA GM YL L+HRDL ++N LV+
Sbjct: 112 EHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVK 154
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 72/163 (44%), Gaps = 21/163 (12%)
Query: 475 RIFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIY 534
RI + ++ + +LG G FG VY+ GE + + + E E K +K+
Sbjct: 12 RILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIP--VAIKELREATSPKANKE---- 65
Query: 535 LIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ 594
+ V+ S+ + +V R +G+ + L+T+ + G L + ++
Sbjct: 66 --------------ILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVR 110
Query: 595 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVR 637
+ + +N+ IA GM YL L+HRDL ++N LV+
Sbjct: 111 EHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVK 153
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 72/163 (44%), Gaps = 21/163 (12%)
Query: 475 RIFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIY 534
RI + ++ + +LG G FG VY+ GE +K + E E K +K+
Sbjct: 10 RILKETEFKKIKVLGSGAFGTVYKGLWIPEGEK--VKIPVAIKELREATSPKANKE---- 63
Query: 535 LIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ 594
+ V+ S+ + +V R +G+ + L+T+ + G L + ++
Sbjct: 64 --------------ILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVR 108
Query: 595 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVR 637
+ + +N+ IA GM YL L+HRDL ++N LV+
Sbjct: 109 EHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVK 151
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 72/163 (44%), Gaps = 21/163 (12%)
Query: 475 RIFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIY 534
RI + ++ + +LG G FG VY+ GE +K + E E K +K+
Sbjct: 10 RILKETEFKKIKVLGSGAFGTVYKGLWIPEGEK--VKIPVAIKELREATSPKANKE---- 63
Query: 535 LIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ 594
+ V+ S+ + +V R +G+ + L+T+ + G L + ++
Sbjct: 64 --------------ILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVR 108
Query: 595 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVR 637
+ + +N+ IA GM YL L+HRDL ++N LV+
Sbjct: 109 EHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVK 151
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 72/163 (44%), Gaps = 21/163 (12%)
Query: 475 RIFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIY 534
RI + ++ + +LG G FG VY+ GE +K + E E K +K+
Sbjct: 20 RILKETEFKKIKVLGSGAFGTVYKGLWIPEGEK--VKIPVAIKELREATSPKANKE---- 73
Query: 535 LIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ 594
+ V+ S+ + +V R +G+ + L+T+ + G L + ++
Sbjct: 74 --------------ILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVR 118
Query: 595 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVR 637
+ + +N+ IA GM YL L+HRDL ++N LV+
Sbjct: 119 EHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVK 161
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 3/100 (3%)
Query: 552 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 611
+ ++ L + ++R IGV + L LV E GG L + L + +P
Sbjct: 386 EAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQ 444
Query: 612 IAAGMTYLHSMNLIHRDLNSQNCLV--REVGSGFDFHLGQ 649
++ GM YL N +HR+L ++N L+ R DF L +
Sbjct: 445 VSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSK 484
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 72/163 (44%), Gaps = 21/163 (12%)
Query: 475 RIFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIY 534
RI + ++ + +LG G FG VY+ GE +K + E E K +K+
Sbjct: 13 RILKETEFKKIKVLGSGAFGTVYKGLWIPEGEK--VKIPVAIKELREATSPKANKE---- 66
Query: 535 LIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ 594
+ V+ S+ + +V R +G+ + L+T+ + G L + ++
Sbjct: 67 --------------ILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVR 111
Query: 595 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVR 637
+ + +N+ IA GM YL L+HRDL ++N LV+
Sbjct: 112 EHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVK 154
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 72/163 (44%), Gaps = 21/163 (12%)
Query: 475 RIFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIY 534
RI + ++ + +LG G FG VY+ GE +K + E E K +K+
Sbjct: 17 RILKETEFKKIKVLGSGAFGTVYKGLWIPEGEK--VKIPVAIKELREATSPKANKE---- 70
Query: 535 LIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ 594
+ V+ S+ + +V R +G+ + L+T+ + G L + ++
Sbjct: 71 --------------ILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVR 115
Query: 595 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVR 637
+ + +N+ IA GM YL L+HRDL ++N LV+
Sbjct: 116 EHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVK 158
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 72/163 (44%), Gaps = 21/163 (12%)
Query: 475 RIFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIY 534
RI + ++ + +LG G FG VY+ GE + + + E E K +K+
Sbjct: 12 RILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIP--VAIKELREATSPKANKE---- 65
Query: 535 LIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ 594
+ V+ S+ + +V R +G+ + L+T+ + G L + ++
Sbjct: 66 --------------ILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVR 110
Query: 595 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVR 637
+ + +N+ IA GM YL L+HRDL ++N LV+
Sbjct: 111 EHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVK 153
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 72/163 (44%), Gaps = 21/163 (12%)
Query: 475 RIFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIY 534
RI + ++ + +LG G FG VY+ GE +K + E E K +K+
Sbjct: 17 RILKETEFKKIKVLGSGAFGTVYKGLWIPEGEK--VKIPVAIKELREATSPKANKE---- 70
Query: 535 LIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ 594
+ V+ S+ + +V R +G+ + L+T+ + G L + ++
Sbjct: 71 --------------ILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVR 115
Query: 595 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVR 637
+ + +N+ IA GM YL L+HRDL ++N LV+
Sbjct: 116 EHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVK 158
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 72/163 (44%), Gaps = 21/163 (12%)
Query: 475 RIFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIY 534
RI + ++ + +LG G FG VY+ GE +K + E E K +K+
Sbjct: 16 RILKETEFKKIKVLGSGAFGTVYKGLWIPEGEK--VKIPVAIKELREATSPKANKE---- 69
Query: 535 LIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ 594
+ V+ S+ + +V R +G+ + L+T+ + G L + ++
Sbjct: 70 --------------ILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVR 114
Query: 595 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVR 637
+ + +N+ IA GM YL L+HRDL ++N LV+
Sbjct: 115 EHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVK 157
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 68/160 (42%), Gaps = 39/160 (24%)
Query: 486 PLLGQGFFGQVYRVTHRETGEVMVLK----ELYRVDEEAEKNFLKESKQGLIYLIDLGSH 541
P LG+G FG+V+R+ ++TG +K E++RV+E
Sbjct: 78 PRLGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEE----------------------- 114
Query: 542 GLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLP 601
+ L ++ G + + +N+ E + GG+L +L++ G LP
Sbjct: 115 -----------LVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGC-LP 162
Query: 602 WGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS 641
+ + + G+ YLH+ ++H D+ + N L+ GS
Sbjct: 163 EDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGS 202
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 72/163 (44%), Gaps = 21/163 (12%)
Query: 475 RIFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIY 534
RI + ++L + +LG G FG VY+ GE + + +V L+E+
Sbjct: 12 RILKETELRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKV--------LRENTSPKA- 62
Query: 535 LIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ 594
N + V+ + V R +G+ + LVT+ + G L + ++
Sbjct: 63 -----------NKEILDEAYVMAGVGSPYVSRLLGICLTS-TVQLVTQLMPYGCLLDHVR 110
Query: 595 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVR 637
+ L +N+ IA GM+YL + L+HRDL ++N LV+
Sbjct: 111 ENRGRLGSQDLLNWCMQIAKGMSYLEDVRLVHRDLAARNVLVK 153
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 69/158 (43%), Gaps = 31/158 (19%)
Query: 487 LLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINN 546
+LG+G FG+VY+ G ++ +K L +E QG
Sbjct: 37 ILGRGGFGKVYK-GRLADGXLVAVKRLK-----------EERTQG-------------GE 71
Query: 547 LHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQ---PLPWG 603
L ++V ++ H N++R G + LV Y+A G++ L++ + PL W
Sbjct: 72 LQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWP 131
Query: 604 QRVNFARDIAAGMTYLHSM---NLIHRDLNSQNCLVRE 638
+R A A G+ YLH +IHRD+ + N L+ E
Sbjct: 132 KRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDE 169
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 64/153 (41%), Gaps = 32/153 (20%)
Query: 487 LLGQGFFGQVYRVTHRETGEVMVLKELY---RVDEEAEKNFLKESKQGLIYLIDLGSHGL 543
+LG G G+V HR TG+ LK LY + +E + ++ ++ ++D
Sbjct: 17 VLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQASGGPHIVCILD------ 70
Query: 544 INNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPG-QPLPW 602
V ++HH R L ++ E + GG L +Q+ G Q
Sbjct: 71 -----------VYENMHHGK-----------RCLLIIMECMEGGELFSRIQERGDQAFTE 108
Query: 603 GQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCL 635
+ RDI + +LHS N+ HRD+ +N L
Sbjct: 109 REAAEIMRDIGTAIQFLHSHNIAHRDVKPENLL 141
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 64/153 (41%), Gaps = 32/153 (20%)
Query: 487 LLGQGFFGQVYRVTHRETGEVMVLKELY---RVDEEAEKNFLKESKQGLIYLIDLGSHGL 543
+LG G G+V HR TG+ LK LY + +E + ++ ++ ++D
Sbjct: 36 VLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQASGGPHIVCILD------ 89
Query: 544 INNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPG-QPLPW 602
V ++HH R L ++ E + GG L +Q+ G Q
Sbjct: 90 -----------VYENMHHGK-----------RCLLIIMECMEGGELFSRIQERGDQAFTE 127
Query: 603 GQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCL 635
+ RDI + +LHS N+ HRD+ +N L
Sbjct: 128 REAAEIMRDIGTAIQFLHSHNIAHRDVKPENLL 160
>pdb|2L4Z|A Chain A, Nmr Structure Of Fusion Of Ctip (641-685) To Lmo4-Lim1
(18-82)
Length = 123
Score = 46.2 bits (108), Expect = 7e-05, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 12 CAGCLNNIVEDEYVQALSQEWHTDCFRCSACDVMLDNW---YFEKDGLLFCKEDYNGKYG 68
CAGC I + + A+ WH+ C +CS+C L + + K G++ C+ DY +G
Sbjct: 64 CAGCGGKIADRFLLYAMDSYWHSRCLKCSSCQAQLGDIGTSSYTKSGMILCRNDYIRLFG 123
Score = 32.3 bits (72), Expect = 1.0, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 71 CQNCGQMMSGPVMVVG-DHKFHPECFKCTSCSCCIGDGESYALVERSILYCGLCYKR 126
C CG ++ ++ D +H C KC+SC +GD + + + ++ C Y R
Sbjct: 64 CAGCGGKIADRFLLYAMDSYWHSRCLKCSSCQAQLGDIGTSSYTKSGMILCRNDYIR 120
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 72/163 (44%), Gaps = 21/163 (12%)
Query: 475 RIFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIY 534
RI + ++ + +LG G FG VY+ GE + + + E E K +K+
Sbjct: 35 RILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIP--VAIKELREATSPKANKE---- 88
Query: 535 LIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ 594
+ V+ S+ + +V R +G+ + L+T+ + G L + ++
Sbjct: 89 --------------ILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVR 133
Query: 595 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVR 637
+ + +N+ IA GM YL L+HRDL ++N LV+
Sbjct: 134 EHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVK 176
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Query: 555 VLRSLHHHNVIRFIGVLYKDRKLNLVT-EYIAGGTLKELLQDPGQPLPWGQRVNFARDIA 613
+++ H NV+ +G+ + LV Y+ G L+ +++ + F +A
Sbjct: 143 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVA 202
Query: 614 AGMTYLHSMNLIHRDLNSQNCLVRE 638
GM +L S +HRDL ++NC++ E
Sbjct: 203 KGMKFLASKKFVHRDLAARNCMLDE 227
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 67/173 (38%), Gaps = 46/173 (26%)
Query: 481 DLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGS 540
D L+G G FGQV++ HR G+ V+K + +E+AE+
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAER------------------ 53
Query: 541 HGLINNLHCFSQVAVLRSLHHHNVIRFIG----------------VLYKDRKLNLVTEYI 584
+V L L H N++ + G K + L + E+
Sbjct: 54 -----------EVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFC 102
Query: 585 AGGTLKELLQD-PGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
GTL++ ++ G+ L + I G+ Y+HS LI+RDL N +
Sbjct: 103 DKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFL 155
>pdb|1M3V|A Chain A, Flin4: Fusion Of The Lim Binding Domain Of Ldb1 And The
N- Terminal Lim Domain Of Lmo4
Length = 122
Score = 45.8 bits (107), Expect = 8e-05, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Query: 12 CAGCLNNIVEDEYVQALSQEWHTDCFRCSACDVMLDNW---YFEKDGLLFCKEDY 63
CAGC I + + A+ WH+ C +CS+C L + + K G++ C+ DY
Sbjct: 8 CAGCGGKIADRFLLYAMDSYWHSRCLKCSSCQAQLGDIGTSSYTKSGMILCRNDY 62
Score = 32.3 bits (72), Expect = 1.00, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 71 CQNCGQMMSGPVMVVG-DHKFHPECFKCTSCSCCIGDGESYALVERSILYCGLCYKR 126
C CG ++ ++ D +H C KC+SC +GD + + + ++ C Y R
Sbjct: 8 CAGCGGKIADRFLLYAMDSYWHSRCLKCSSCQAQLGDIGTSSYTKSGMILCRNDYIR 64
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 71/162 (43%), Gaps = 31/162 (19%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
+G+G G V T + TG+ + +K++ + K+ ++ L+
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKM---------DLRKQQRRELL-------------- 89
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
F++V ++R HH NV+ +L +V E++ GG L +++ + Q
Sbjct: 90 --FNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDIVTH--TRMNEEQIAT 145
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG----SGFDF 645
+ ++YLH+ +IHRD+ S + L+ G S F F
Sbjct: 146 VCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGF 187
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 71/168 (42%), Gaps = 24/168 (14%)
Query: 473 KSRIFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGL 532
KSR R L LG+G F VY+ + T +++ +K++ + E+K G+
Sbjct: 6 KSRAKRYEKL---DFLGEGQFATVYKARDKNTNQIVAIKKI-------KLGHRSEAKDGI 55
Query: 533 IYLIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKEL 592
N ++ +L+ L H N+I + ++LV +++ L+ +
Sbjct: 56 -------------NRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMET-DLEVI 101
Query: 593 LQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
++D L + G+ YLH ++HRDL N L+ E G
Sbjct: 102 IKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENG 149
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 73/170 (42%), Gaps = 35/170 (20%)
Query: 475 RIFRASDLVRGPLLGQGFFGQVYRVTHRETGE-------VMVLKELYRVDEEAEKNFLKE 527
RI + ++ + +LG G FG VY+ GE +M L+E +A K L E
Sbjct: 44 RILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREA--TSPKANKEILDE 101
Query: 528 SKQGLIYLIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGG 587
+ V+ S+ + +V R +G+ + L+T+ + G
Sbjct: 102 A-------------------------YVMASVDNPHVCRLLGICLTS-TVQLITQLMPFG 135
Query: 588 TLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVR 637
L + +++ + +N+ IA GM YL L+HRDL ++N LV+
Sbjct: 136 CLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVK 185
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 68/158 (43%), Gaps = 32/158 (20%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LG G FG V R H++TGE + +K+ + E + KN
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQ--ELSPKN---------------------RER 59
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQDPGQ--P 599
C ++ +++ L+H NV+ V +KL L EY GG L++ L
Sbjct: 60 WCL-EIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCG 118
Query: 600 LPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVR 637
L G DI++ + YLH +IHRDL +N +++
Sbjct: 119 LKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQ 156
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 68/158 (43%), Gaps = 32/158 (20%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LG G FG V R H++TGE + +K+ + E + KN
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQ--ELSPKN---------------------RER 58
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQDPGQ--P 599
C ++ +++ L+H NV+ V +KL L EY GG L++ L
Sbjct: 59 WCL-EIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCG 117
Query: 600 LPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVR 637
L G DI++ + YLH +IHRDL +N +++
Sbjct: 118 LKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQ 155
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 551 SQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFAR 610
+++ L++L H ++ + VL K+ +V EY GG L + + + RV F R
Sbjct: 57 TEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVF-R 115
Query: 611 DIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
I + + Y+HS HRDL +N L E
Sbjct: 116 QIVSAVAYVHSQGYAHRDLKPENLLFDE 143
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 45/87 (51%), Gaps = 5/87 (5%)
Query: 551 SQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQR--VNF 608
+++ VL L H N+I+ + +++LV E + GG L + + + G + +R +
Sbjct: 97 TEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGY---YSERDAADA 153
Query: 609 ARDIAAGMTYLHSMNLIHRDLNSQNCL 635
+ I + YLH ++HRDL +N L
Sbjct: 154 VKQILEAVAYLHENGIVHRDLKPENLL 180
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Query: 555 VLRSLHHHNVIRFIGVLYKDRKLNLVT-EYIAGGTLKELLQDPGQPLPWGQRVNFARDIA 613
+++ H NV+ +G+ + LV Y+ G L+ +++ + F +A
Sbjct: 84 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVA 143
Query: 614 AGMTYLHSMNLIHRDLNSQNCLVRE 638
GM +L S +HRDL ++NC++ E
Sbjct: 144 KGMKFLASKKFVHRDLAARNCMLDE 168
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Query: 555 VLRSLHHHNVIRFIGVLYKDRKLNLVT-EYIAGGTLKELLQDPGQPLPWGQRVNFARDIA 613
+++ H NV+ +G+ + LV Y+ G L+ +++ + F +A
Sbjct: 85 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVA 144
Query: 614 AGMTYLHSMNLIHRDLNSQNCLVRE 638
GM +L S +HRDL ++NC++ E
Sbjct: 145 KGMKFLASKKFVHRDLAARNCMLDE 169
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Query: 555 VLRSLHHHNVIRFIGVLYKDRKLNLVT-EYIAGGTLKELLQDPGQPLPWGQRVNFARDIA 613
+++ H NV+ +G+ + LV Y+ G L+ +++ + F +A
Sbjct: 84 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVA 143
Query: 614 AGMTYLHSMNLIHRDLNSQNCLVRE 638
GM +L S +HRDL ++NC++ E
Sbjct: 144 KGMKFLASKKFVHRDLAARNCMLDE 168
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Query: 555 VLRSLHHHNVIRFIGVLYKDRKLNLVT-EYIAGGTLKELLQDPGQPLPWGQRVNFARDIA 613
+++ H NV+ +G+ + LV Y+ G L+ +++ + F +A
Sbjct: 82 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVA 141
Query: 614 AGMTYLHSMNLIHRDLNSQNCLVRE 638
GM +L S +HRDL ++NC++ E
Sbjct: 142 KGMKFLASKKFVHRDLAARNCMLDE 166
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Query: 555 VLRSLHHHNVIRFIGVLYKDRKLNLVT-EYIAGGTLKELLQDPGQPLPWGQRVNFARDIA 613
+++ H NV+ +G+ + LV Y+ G L+ +++ + F +A
Sbjct: 85 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVA 144
Query: 614 AGMTYLHSMNLIHRDLNSQNCLVRE 638
GM +L S +HRDL ++NC++ E
Sbjct: 145 KGMKFLASKKFVHRDLAARNCMLDE 169
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Query: 555 VLRSLHHHNVIRFIGVLYKDRKLNLVT-EYIAGGTLKELLQDPGQPLPWGQRVNFARDIA 613
+++ H NV+ +G+ + LV Y+ G L+ +++ + F +A
Sbjct: 89 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVA 148
Query: 614 AGMTYLHSMNLIHRDLNSQNCLVRE 638
GM +L S +HRDL ++NC++ E
Sbjct: 149 KGMKFLASKKFVHRDLAARNCMLDE 173
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 64/156 (41%), Gaps = 26/156 (16%)
Query: 487 LLGQGFFGQVYRVTHRETGEVMVLKELYRVD--EEAEKNFLKESKQGLIYLIDLGSHGLI 544
++G+G F +V V ++TG+V +K + + D + E + +E + L+ G I
Sbjct: 68 VIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVN----GDRRWI 123
Query: 545 NNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQ 604
LH Q + L LV EY GG L LL G+ +P
Sbjct: 124 TQLHFAFQ--------------------DENYLYLVMEYYVGGDLLTLLSKFGERIPAEM 163
Query: 605 RVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
+ +I + +H + +HRD+ N L+ G
Sbjct: 164 ARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCG 199
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Query: 552 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 611
+V++LR + H N+I V + L+ E ++GG L + L + L + +F +
Sbjct: 65 EVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQK-ESLSEEEATSFIKQ 123
Query: 612 IAAGMTYLHSMNLIHRDLNSQNCLV 636
I G+ YLH+ + H DL +N ++
Sbjct: 124 ILDGVNYLHTKKIAHFDLKPENIML 148
>pdb|1CXX|A Chain A, Mutant R122a Of Quail Cysteine And Glycine-Rich Protein,
Nmr, Minimized Structure
Length = 113
Score = 45.1 bits (105), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 12 CAGCLNNIVEDEYVQALSQEWHTDCFRCSACDVMLDNWYF-EKDGLLFCKEDYNGKYGEA 70
C+ C +++ E V + WH +CFRC+ C L++ EK+G ++CK Y +G
Sbjct: 39 CSACGDSVYAAEKVIGAGKPWHKNCFRCAKCGKSLESTTLTEKEGEIYCKGCYAKNFGPK 98
Query: 71 CQNCGQ 76
GQ
Sbjct: 99 GFGYGQ 104
Score = 39.7 bits (91), Expect = 0.005, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 7/71 (9%)
Query: 66 KYG--EACQNCGQMMSGPVMVVGDHK-FHPECFKCTSCSCCIGDGESYALVERS-ILYCG 121
K+G E C CG + V+G K +H CF+C C + ES L E+ +YC
Sbjct: 32 KFGGAEKCSACGDSVYAAEKVIGAGKPWHKNCFRCAKCGKSL---ESTTLTEKEGEIYCK 88
Query: 122 LCYKRQMQPLG 132
CY + P G
Sbjct: 89 GCYAKNFGPKG 99
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 68/160 (42%), Gaps = 39/160 (24%)
Query: 486 PLLGQGFFGQVYRVTHRETGEVMVLK----ELYRVDEEAEKNFLKESKQGLIYLIDLGSH 541
P +G+G FG+V+R+ ++TG +K E++RV+E
Sbjct: 64 PRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEE----------------------- 100
Query: 542 GLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLP 601
+ L ++ G + + +N+ E + GG+L +L++ G LP
Sbjct: 101 -----------LVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGC-LP 148
Query: 602 WGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS 641
+ + + G+ YLH+ ++H D+ + N L+ GS
Sbjct: 149 EDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGS 188
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 63/173 (36%), Gaps = 39/173 (22%)
Query: 479 ASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDL 538
ASD +LGQG FGQV + + +K++ +E+
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLST---------------- 48
Query: 539 GSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRK-------------LNLVTEYIA 585
S+V +L SL+H V+R+ + R L + EY
Sbjct: 49 ----------ILSEVXLLASLNHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCE 98
Query: 586 GGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
TL +L+ + R I ++Y+HS +IHR+L N + E
Sbjct: 99 NRTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRNLKPXNIFIDE 151
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 69/167 (41%), Gaps = 30/167 (17%)
Query: 478 RASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYR----VDEEAEKNFLKESKQGLI 533
+ D + +LG+G FG+V+ ++T + +K L + +D++ E +++ L
Sbjct: 15 KIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLA 74
Query: 534 YLIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELL 593
+ H + ++ C Q L V EY+ GG L +
Sbjct: 75 W-----EHPFLTHMFCTFQTK--------------------ENLFFVMEYLNGGDLMYHI 109
Query: 594 QDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
Q + +A +I G+ +LHS +++RDL N L+ + G
Sbjct: 110 QS-CHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDG 155
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 68/160 (42%), Gaps = 39/160 (24%)
Query: 486 PLLGQGFFGQVYRVTHRETGEVMVLK----ELYRVDEEAEKNFLKESKQGLIYLIDLGSH 541
P +G+G FG+V+R+ ++TG +K E++RV+E
Sbjct: 80 PRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEE----------------------- 116
Query: 542 GLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLP 601
+ L ++ G + + +N+ E + GG+L +L++ G LP
Sbjct: 117 -----------LVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGC-LP 164
Query: 602 WGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS 641
+ + + G+ YLH+ ++H D+ + N L+ GS
Sbjct: 165 EDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGS 204
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 2/94 (2%)
Query: 543 LINNLHCFSQ-VAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLP 601
+ ++ F Q + +++SL H N+IR + + LV E GG L E + +
Sbjct: 46 FVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVH-KRVFR 104
Query: 602 WGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCL 635
+D+ + + Y H +N+ HRDL +N L
Sbjct: 105 ESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFL 138
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 2/94 (2%)
Query: 543 LINNLHCFSQ-VAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLP 601
+ ++ F Q + +++SL H N+IR + + LV E GG L E + +
Sbjct: 63 FVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVH-KRVFR 121
Query: 602 WGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCL 635
+D+ + + Y H +N+ HRDL +N L
Sbjct: 122 ESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFL 155
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 71/163 (43%), Gaps = 21/163 (12%)
Query: 475 RIFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIY 534
RI + ++ + +LG G FG VY+ GE +K + E E K +K+
Sbjct: 11 RILKETEFKKIKVLGSGAFGTVYKGLWIPEGEK--VKIPVAIKELREATSPKANKE---- 64
Query: 535 LIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ 594
+ V+ S+ + +V R +G+ + L+ + + G L + ++
Sbjct: 65 --------------ILDEAYVMASVDNPHVCRLLGICLTS-TVQLIMQLMPFGXLLDYVR 109
Query: 595 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVR 637
+ + +N+ IA GM YL L+HRDL ++N LV+
Sbjct: 110 EHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVK 152
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 70/159 (44%), Gaps = 5/159 (3%)
Query: 481 DLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGS 540
D L+G G FGQV++ HR G+ V++ + +E+AE+ +K + ++
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAEREVKALAKLDHVNIVHY-- 70
Query: 541 HGLINNLHCFSQVA--VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP-G 597
+G + + + L S + K + L + E+ GTL++ ++ G
Sbjct: 71 NGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRG 130
Query: 598 QPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
+ L + I G+ Y+HS LIHRDL N +
Sbjct: 131 EKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFL 169
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 71/163 (43%), Gaps = 21/163 (12%)
Query: 475 RIFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIY 534
RI + ++ + +LG G FG VY+ GE +K + E E K +K+
Sbjct: 14 RILKETEFKKIKVLGSGAFGTVYKGLWIPEGEK--VKIPVAIKELREATSPKANKE---- 67
Query: 535 LIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ 594
+ V+ S+ + +V R +G+ + L+ + + G L + ++
Sbjct: 68 --------------ILDEAYVMASVDNPHVCRLLGICLTS-TVQLIMQLMPFGCLLDYVR 112
Query: 595 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVR 637
+ + +N+ IA GM YL L+HRDL ++N LV+
Sbjct: 113 EHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVK 155
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 67/158 (42%), Gaps = 39/158 (24%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLK----ELYRVDEEAEKNFLKESKQGLIYLIDLGSHGL 543
LG+G FG+V+R+ ++TG +K E++R +E
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAEE------------------------- 135
Query: 544 INNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWG 603
+ L ++ G + + +N+ E + GG+L +L+++ G LP
Sbjct: 136 ---------LMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGC-LPED 185
Query: 604 QRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS 641
+ + + G+ YLHS ++H D+ + N L+ GS
Sbjct: 186 RALYYLGQALEGLEYLHSRRILHGDVKADNVLLSSDGS 223
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 71/163 (43%), Gaps = 21/163 (12%)
Query: 475 RIFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIY 534
RI + ++ + +LG G FG VY+ GE +K + E E K +K+
Sbjct: 12 RILKETEFKKIKVLGSGAFGTVYKGLWIPEGEK--VKIPVAIKELREATSPKANKE---- 65
Query: 535 LIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ 594
+ V+ S+ + +V R +G+ + L+ + + G L + ++
Sbjct: 66 --------------ILDEAYVMASVDNPHVCRLLGICLTS-TVQLIMQLMPFGCLLDYVR 110
Query: 595 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVR 637
+ + +N+ IA GM YL L+HRDL ++N LV+
Sbjct: 111 EHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVK 153
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 71/163 (43%), Gaps = 21/163 (12%)
Query: 475 RIFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIY 534
RI + ++ + +LG G FG VY+ GE +K + E E K +K+
Sbjct: 11 RILKETEFKKIKVLGSGAFGTVYKGLWIPEGEK--VKIPVAIKELREATSPKANKE---- 64
Query: 535 LIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ 594
+ V+ S+ + +V R +G+ + L+ + + G L + ++
Sbjct: 65 --------------ILDEAYVMASVDNPHVCRLLGICLTS-TVQLIMQLMPFGCLLDYVR 109
Query: 595 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVR 637
+ + +N+ IA GM YL L+HRDL ++N LV+
Sbjct: 110 EHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVK 152
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 71/163 (43%), Gaps = 21/163 (12%)
Query: 475 RIFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIY 534
RI + ++ + +LG G FG VY+ GE +K + E E K +K+
Sbjct: 10 RILKETEFKKIKVLGSGAFGTVYKGLWIPEGEK--VKIPVAIKELREATSPKANKE---- 63
Query: 535 LIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ 594
+ V+ S+ + +V R +G+ + L+ + + G L + ++
Sbjct: 64 --------------ILDEAYVMASVDNPHVCRLLGICLTS-TVQLIMQLMPFGCLLDYVR 108
Query: 595 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVR 637
+ + +N+ IA GM YL L+HRDL ++N LV+
Sbjct: 109 EHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVK 151
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 71/163 (43%), Gaps = 21/163 (12%)
Query: 475 RIFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIY 534
RI + ++ + +LG G FG VY+ GE +K + E E K +K+
Sbjct: 14 RILKETEFKKIKVLGSGAFGTVYKGLWIPEGEK--VKIPVAIKELREATSPKANKE---- 67
Query: 535 LIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ 594
+ V+ S+ + +V R +G+ + L+ + + G L + ++
Sbjct: 68 --------------ILDEAYVMASVDNPHVCRLLGICLTS-TVQLIMQLMPFGCLLDYVR 112
Query: 595 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVR 637
+ + +N+ IA GM YL L+HRDL ++N LV+
Sbjct: 113 EHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVK 155
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 71/163 (43%), Gaps = 21/163 (12%)
Query: 475 RIFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIY 534
RI + ++ + +LG G FG VY+ GE +K + E E K +K+
Sbjct: 13 RILKETEFKKIKVLGSGAFGTVYKGLWIPEGEK--VKIPVAIKELREATSPKANKE---- 66
Query: 535 LIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ 594
+ V+ S+ + +V R +G+ + L+ + + G L + ++
Sbjct: 67 --------------ILDEAYVMASVDNPHVCRLLGICLTS-TVQLIMQLMPFGCLLDYVR 111
Query: 595 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVR 637
+ + +N+ IA GM YL L+HRDL ++N LV+
Sbjct: 112 EHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVK 154
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 71/163 (43%), Gaps = 21/163 (12%)
Query: 475 RIFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIY 534
RI + ++ + +LG G FG VY+ GE +K + E E K +K+
Sbjct: 12 RILKETEFKKIKVLGSGAFGTVYKGLWIPEGEK--VKIPVAIKELREATSPKANKE---- 65
Query: 535 LIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ 594
+ V+ S+ + +V R +G+ + L+ + + G L + ++
Sbjct: 66 --------------ILDEAYVMASVDNPHVCRLLGICLTS-TVQLIMQLMPFGCLLDYVR 110
Query: 595 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVR 637
+ + +N+ IA GM YL L+HRDL ++N LV+
Sbjct: 111 EHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVK 153
>pdb|2YUB|A Chain A, Solution Structure Of The Pdz Domain From Mouse Lim Domain
Kinase
Length = 118
Score = 43.9 bits (102), Expect = 3e-04, Method: Composition-based stats.
Identities = 19/35 (54%), Positives = 27/35 (77%)
Query: 292 SLHLGDRILEVNGTPVRDKPLQEVECLIRNTTDTV 326
++H GDRILE+NGTPVR ++EVE I+ T+ T+
Sbjct: 63 AIHPGDRILEINGTPVRTLRVEEVEDAIKQTSQTL 97
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 71/163 (43%), Gaps = 21/163 (12%)
Query: 475 RIFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIY 534
RI + ++ + +LG G FG VY+ GE +K + E E K +K+
Sbjct: 12 RILKETEFKKIKVLGSGAFGTVYKGLWIPEGEK--VKIPVAIKELREATSPKANKE---- 65
Query: 535 LIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ 594
+ V+ S+ + +V R +G+ + L+ + + G L + ++
Sbjct: 66 --------------ILDEAYVMASVDNPHVCRLLGICLTS-TVQLIMQLMPFGCLLDYVR 110
Query: 595 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVR 637
+ + +N+ IA GM YL L+HRDL ++N LV+
Sbjct: 111 EHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVK 153
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 67/158 (42%), Gaps = 39/158 (24%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLK----ELYRVDEEAEKNFLKESKQGLIYLIDLGSHGL 543
LG+G FG+V+R+ ++TG +K E++R +E
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAEE------------------------- 116
Query: 544 INNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWG 603
+ L ++ G + + +N+ E + GG+L +L+++ G LP
Sbjct: 117 ---------LMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGC-LPED 166
Query: 604 QRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS 641
+ + + G+ YLHS ++H D+ + N L+ GS
Sbjct: 167 RALYYLGQALEGLEYLHSRRILHGDVKADNVLLSSDGS 204
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 71/163 (43%), Gaps = 21/163 (12%)
Query: 475 RIFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIY 534
RI + ++ + +L G FG VY+ GE +K + E E K +K+
Sbjct: 10 RILKETEFKKIKVLSSGAFGTVYKGLWIPEGEK--VKIPVAIKELREATSPKANKE---- 63
Query: 535 LIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ 594
+ V+ S+ + +V R +G+ + L+T+ + G L + ++
Sbjct: 64 --------------ILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVR 108
Query: 595 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVR 637
+ + +N+ IA GM YL L+HRDL ++N LV+
Sbjct: 109 EHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVK 151
>pdb|1IBI|A Chain A, Quail Cysteine And Glycine-Rich Protein, Nmr, 15 Minimized
Model Structures
pdb|1QLI|A Chain A, Quail Cysteine And Glycine-Rich Protein, Nmr, Minimized
Average Structure
Length = 113
Score = 43.9 bits (102), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 12 CAGCLNNIVEDEYVQALSQEWHTDCFRCSACDVMLDNWYF-EKDGLLFCKEDYNGKYGEA 70
C+ C +++ E V + WH +CFRC+ C L++ EK+G ++CK Y +G
Sbjct: 39 CSRCGDSVYAAEKVIGAGKPWHKNCFRCAKCGKSLESTTLTEKEGEIYCKGCYAKNFGPK 98
Query: 71 CQNCGQ 76
GQ
Sbjct: 99 GFGYGQ 104
Score = 40.0 bits (92), Expect = 0.004, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 7/71 (9%)
Query: 66 KYG--EACQNCGQMMSGPVMVVGDHK-FHPECFKCTSCSCCIGDGESYALVERS-ILYCG 121
K+G E C CG + V+G K +H CF+C C + ES L E+ +YC
Sbjct: 32 KFGGAEKCSRCGDSVYAAEKVIGAGKPWHKNCFRCAKCGKSL---ESTTLTEKEGEIYCK 88
Query: 122 LCYKRQMQPLG 132
CY + P G
Sbjct: 89 GCYAKNFGPKG 99
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 73/164 (44%), Gaps = 31/164 (18%)
Query: 476 IFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYL 535
+ R +LV+ LG+G +G V++ R TGEV+ +K+++ +A +N +
Sbjct: 7 VLRKYELVKK--LGKGAYGIVWKSIDRRTGEVVAVKKIF----DAFQNSTDAQR------ 54
Query: 536 IDLGSHGLINNLHCFSQVAVLRSLH-HHNVIRFIGVLY--KDRKLNLVTEYIAGGTLKEL 592
F ++ +L L H N++ + VL DR + LV +Y+ +
Sbjct: 55 -------------TFREIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYMETDLHAVI 101
Query: 593 LQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
+ +P+ + + + YLHS L+HRD+ N L+
Sbjct: 102 RANILEPV---HKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILL 142
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 71/163 (43%), Gaps = 21/163 (12%)
Query: 475 RIFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIY 534
RI + ++ + +L G FG VY+ GE +K + E E K +K+
Sbjct: 17 RILKETEFKKIKVLSSGAFGTVYKGLWIPEGEK--VKIPVAIKELREATSPKANKE---- 70
Query: 535 LIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ 594
+ V+ S+ + +V R +G+ + L+T+ + G L + ++
Sbjct: 71 --------------ILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVR 115
Query: 595 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVR 637
+ + +N+ IA GM YL L+HRDL ++N LV+
Sbjct: 116 EHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVK 158
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 579 LVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
+V EY+ G +LK + GQ LP + + + +I ++YLHS+ L++ DL +N ++ E
Sbjct: 161 IVMEYVGGQSLK---RSKGQKLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTE 217
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 69/157 (43%), Gaps = 30/157 (19%)
Query: 487 LLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINN 546
L+G G +G V + V+ +K++ RV E+ LI+
Sbjct: 60 LIGTGSYGHVCEAYDKLEKRVVAIKKILRVFED-----------------------LIDC 96
Query: 547 LHCFSQVAVLRSLHHHNVIRFIGVLY-----KDRKLNLVTEYIAGGTLKELLQDPGQPLP 601
++A+L L+H +V++ + ++ K +L +V E IA K+L + P L
Sbjct: 97 KRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLE-IADSDFKKLFRTPVY-LT 154
Query: 602 WGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
++ G+ Y+HS ++HRDL NCLV +
Sbjct: 155 ELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQ 191
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 72/176 (40%), Gaps = 35/176 (19%)
Query: 477 FRASDLVRGPLLGQGFFGQVYRVTHRETG-EVMVLKELYRVDEEAEKNFLKESKQGLIYL 535
F ++L G LG G FG+V T G E VLK ++ + KE+
Sbjct: 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEA------- 95
Query: 536 IDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ- 594
L++ L S + H N++ +G + ++TEY G L L+
Sbjct: 96 -------LMSELKIMSHLG-----QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRR 143
Query: 595 --------------DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
+P + L ++F+ +A GM +L S N IHRD+ ++N L+
Sbjct: 144 KRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLL 199
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 71/166 (42%), Gaps = 26/166 (15%)
Query: 478 RASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLID 537
+A DL LG+G +G V ++ H +G++M +K + E+ L L+D
Sbjct: 49 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRL---------LMD 99
Query: 538 LGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ--D 595
L +R++ + F G L+++ + + E + K Q D
Sbjct: 100 LD--------------ISMRTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVID 145
Query: 596 PGQPLPWGQRVNFARDIAAGMTYLHS-MNLIHRDLNSQNCLVREVG 640
GQ +P A I + +LHS +++IHRD+ N L+ +G
Sbjct: 146 KGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALG 191
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Query: 550 FSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFA 609
+ +R H ++++ IGV+ ++ + ++ E G L+ LQ L + +A
Sbjct: 59 LQEALTMRQFDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKYSLDLASLILYA 117
Query: 610 RDIAAGMTYLHSMNLIHRDLNSQNCLV 636
++ + YL S +HRD+ ++N LV
Sbjct: 118 YQLSTALAYLESKRFVHRDIAARNVLV 144
>pdb|1J2O|A Chain A, Structure Of Flin2, A Complex Containing The N-Terminal
Lim Domain Of Lmo2 And Ldb1-Lid
Length = 114
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Query: 9 ILTCAGCLNNIVEDEYVQALSQEWHTDCFRCSACDVMLDN---WYFEKDGLLFCKEDY 63
+LTC GC NI + +++A+ Q WH DC C C L + K G C+ DY
Sbjct: 3 LLTCGGCQQNIGDRYFLKAIDQYWHEDCLSCDLCGCRLGEVGRRLYYKLGRKLCRRDY 60
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Query: 550 FSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFA 609
+ +R H ++++ IGV+ ++ + ++ E G L+ LQ L + +A
Sbjct: 56 LQEALTMRQFDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKYSLDLASLILYA 114
Query: 610 RDIAAGMTYLHSMNLIHRDLNSQNCLV 636
++ + YL S +HRD+ ++N LV
Sbjct: 115 YQLSTALAYLESKRFVHRDIAARNVLV 141
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Query: 550 FSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFA 609
+ +R H ++++ IGV+ ++ + ++ E G L+ LQ L + +A
Sbjct: 59 LQEALTMRQFDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKYSLDLASLILYA 117
Query: 610 RDIAAGMTYLHSMNLIHRDLNSQNCLV 636
++ + YL S +HRD+ ++N LV
Sbjct: 118 YQLSTALAYLESKRFVHRDIAARNVLV 144
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 67/159 (42%), Gaps = 32/159 (20%)
Query: 487 LLGQGFFGQVYRVTHRETGEVMVLKELYR----VDEEAEKNFLKESKQGLIYLIDLGSHG 542
+LG+G FG+V + T E+ +K L + D++ E +++ L L
Sbjct: 26 VLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLAL-----LDKPP 80
Query: 543 LINNLH-CFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLP 601
+ LH CF V +L V EY+ GG L +Q G+
Sbjct: 81 FLTQLHSCFQTVD---------------------RLYFVMEYVNGGDLMYHIQQVGK-FK 118
Query: 602 WGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
Q V +A +I+ G+ +LH +I+RDL N ++ G
Sbjct: 119 EPQAVFYAAEISIGLFFLHKRGIIYRDLKLDNVMLDSEG 157
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Query: 550 FSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFA 609
+ +R H ++++ IGV+ ++ + ++ E G L+ LQ L + +A
Sbjct: 61 LQEALTMRQFDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKYSLDLASLILYA 119
Query: 610 RDIAAGMTYLHSMNLIHRDLNSQNCLV 636
++ + YL S +HRD+ ++N LV
Sbjct: 120 YQLSTALAYLESKRFVHRDIAARNVLV 146
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 78/184 (42%), Gaps = 29/184 (15%)
Query: 485 GPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLI 544
GPLLG+G FG V+ HR T + V ++ +N + LG L
Sbjct: 36 GPLLGKGGFGTVF-AGHRLTDRLQVAIKVI------PRNRV------------LGWSPLS 76
Query: 545 NNLHCFSQVAVLRSLH----HHNVIRFIGVLYKDRKLNLVTEY-IAGGTLKELLQDPGQP 599
+++ C +VA+L + H VIR + LV E + L + + + G P
Sbjct: 77 DSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKG-P 135
Query: 600 LPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV---REVGSGFDFHLGQIYLIYVP 656
L G F + A + + HS ++HRD+ +N L+ R DF G + L P
Sbjct: 136 LGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGAL-LHDEP 194
Query: 657 YTLF 660
YT F
Sbjct: 195 YTDF 198
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Query: 550 FSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFA 609
+ +R H ++++ IGV+ ++ + ++ E G L+ LQ L + +A
Sbjct: 64 LQEALTMRQFDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKYSLDLASLILYA 122
Query: 610 RDIAAGMTYLHSMNLIHRDLNSQNCLV 636
++ + YL S +HRD+ ++N LV
Sbjct: 123 YQLSTALAYLESKRFVHRDIAARNVLV 149
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Query: 550 FSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFA 609
+ +R H ++++ IGV+ ++ + ++ E G L+ LQ L + +A
Sbjct: 87 LQEALTMRQFDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKYSLDLASLILYA 145
Query: 610 RDIAAGMTYLHSMNLIHRDLNSQNCLV 636
++ + YL S +HRD+ ++N LV
Sbjct: 146 YQLSTALAYLESKRFVHRDIAARNVLV 172
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Query: 550 FSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFA 609
+ +R H ++++ IGV+ ++ + ++ E G L+ LQ L + +A
Sbjct: 62 LQEALTMRQFDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKYSLDLASLILYA 120
Query: 610 RDIAAGMTYLHSMNLIHRDLNSQNCLV 636
++ + YL S +HRD+ ++N LV
Sbjct: 121 YQLSTALAYLESKRFVHRDIAARNVLV 147
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 71/166 (42%), Gaps = 26/166 (15%)
Query: 478 RASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLID 537
+A DL LG+G +G V ++ H +G++M +K + E+ L L+D
Sbjct: 5 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRL---------LMD 55
Query: 538 LGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ--D 595
L +R++ + F G L+++ + + E + K Q D
Sbjct: 56 LD--------------ISMRTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVID 101
Query: 596 PGQPLPWGQRVNFARDIAAGMTYLHS-MNLIHRDLNSQNCLVREVG 640
GQ +P A I + +LHS +++IHRD+ N L+ +G
Sbjct: 102 KGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALG 147
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 75/158 (47%), Gaps = 29/158 (18%)
Query: 487 LLGQGFFGQVY---RVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGL 543
+LGQG FG+V+ +VT ++G + +K L +K LK +
Sbjct: 35 VLGQGSFGKVFLVRKVTRPDSGHLYAMKVL-------KKATLK----------------V 71
Query: 544 INNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWG 603
+ + + +L ++H V++ + KL L+ +++ GG L L + +
Sbjct: 72 RDRVRTKMERDILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSK--EVMFTE 129
Query: 604 QRVNF-ARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
+ V F ++A G+ +LHS+ +I+RDL +N L+ E G
Sbjct: 130 EDVKFYLAELALGLDHLHSLGIIYRDLKPENILLDEEG 167
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 70/157 (44%), Gaps = 25/157 (15%)
Query: 487 LLGQGFFGQVY---RVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGL 543
+LG+G +G+V+ +VT TG++ +K L + ++ +K
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKA------MIVRNAK-------------- 63
Query: 544 INNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWG 603
+ H ++ +L + H ++ I KL L+ EY++GG L L+ G +
Sbjct: 64 -DTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFME-D 121
Query: 604 QRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
+ +I+ + +LH +I+RDL +N ++ G
Sbjct: 122 TACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQG 158
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 70/157 (44%), Gaps = 25/157 (15%)
Query: 487 LLGQGFFGQVY---RVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGL 543
+LG+G +G+V+ +VT TG++ +K L + ++ +K
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKA------MIVRNAK-------------- 63
Query: 544 INNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWG 603
+ H ++ +L + H ++ I KL L+ EY++GG L L+ G +
Sbjct: 64 -DTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFME-D 121
Query: 604 QRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
+ +I+ + +LH +I+RDL +N ++ G
Sbjct: 122 TACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQG 158
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 71/174 (40%), Gaps = 33/174 (18%)
Query: 477 FRASDLVRGPLLGQGFFGQVYRVTHRETG-EVMVLKELYRVDEEAEKNFLKESKQGLIYL 535
F ++L G LG G FG+V T G E VLK ++ + KE+
Sbjct: 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEA------- 95
Query: 536 IDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ- 594
L++ L S + H N++ +G + ++TEY G L L+
Sbjct: 96 -------LMSELKIMSHLG-----QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRR 143
Query: 595 -------DPG-----QPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
DP L ++F+ +A GM +L S N IHRD+ ++N L+
Sbjct: 144 KSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLL 197
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Query: 550 FSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFA 609
+ +R H ++++ IGV+ ++ + ++ E G L+ LQ L + +A
Sbjct: 59 LQEALTMRQFDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKFSLDLASLILYA 117
Query: 610 RDIAAGMTYLHSMNLIHRDLNSQNCLV 636
++ + YL S +HRD+ ++N LV
Sbjct: 118 YQLSTALAYLESKRFVHRDIAARNVLV 144
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Query: 550 FSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFA 609
+ +R H ++++ IGV+ ++ + ++ E G L+ LQ L + +A
Sbjct: 59 LQEALTMRQFDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKFSLDLASLILYA 117
Query: 610 RDIAAGMTYLHSMNLIHRDLNSQNCLV 636
++ + YL S +HRD+ ++N LV
Sbjct: 118 YQLSTALAYLESKRFVHRDIAARNVLV 144
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 563 NVIRFIGV---LYKDRK-LNLVTEYIAGGTLKELLQDPG-QPLPWGQRVNFARDIAAGMT 617
+++R + V LY RK L +V E + GG L +QD G Q + + I +
Sbjct: 116 HIVRIVDVYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQ 175
Query: 618 YLHSMNLIHRDLNSQNCL 635
YLHS+N+ HRD+ +N L
Sbjct: 176 YLHSINIAHRDVKPENLL 193
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Query: 550 FSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFA 609
F++V ++R H NV+ +L ++ E++ GG L +++ L Q
Sbjct: 90 FNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVR--LNEEQIATVC 147
Query: 610 RDIAAGMTYLHSMNLIHRDLNSQNCLV 636
+ + YLH+ +IHRD+ S + L+
Sbjct: 148 EAVLQALAYLHAQGVIHRDIKSDSILL 174
>pdb|1X3H|A Chain A, Solution Structure Of The Lim Domain Of Human Leupaxin
Length = 80
Score = 42.4 bits (98), Expect = 8e-04, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 12 CAGCLNNIVEDEYVQALSQEWHTDCFRCSACDVMLDNW-YFEKDGLLFCKEDYNGKYG 68
C GC N V + Y+ A+ WH +CF C C +FE DG FC+ Y+ + G
Sbjct: 18 CGGC-NRPVLENYLSAMDTVWHPECFVCGDCFTSFSTGSFFELDGRPFCELHYHHRRG 74
Score = 31.6 bits (70), Expect = 1.4, Method: Composition-based stats.
Identities = 17/67 (25%), Positives = 27/67 (40%), Gaps = 2/67 (2%)
Query: 61 EDYNGKYGEACQNCGQMMSGPVMVVGDHKFHPECFKCTSCSCCIGDGESYALVERSILYC 120
+D+ + C C + + + D +HPECF C C G + L R +C
Sbjct: 8 KDFLAMFSPKCGGCNRPVLENYLSAMDTVWHPECFVCGDCFTSFSTGSFFELDGRP--FC 65
Query: 121 GLCYKRQ 127
L Y +
Sbjct: 66 ELHYHHR 72
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 68/167 (40%), Gaps = 30/167 (17%)
Query: 478 RASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYR----VDEEAEKNFLKESKQGLI 533
+ D +LG+G FG+V+ ++T + +K L + +D++ E +++ L
Sbjct: 16 KIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLA 75
Query: 534 YLIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELL 593
+ H + ++ C Q L V EY+ GG L +
Sbjct: 76 W-----EHPFLTHMFCTFQTK--------------------ENLFFVMEYLNGGDLMYHI 110
Query: 594 QDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
Q + +A +I G+ +LHS +++RDL N L+ + G
Sbjct: 111 QS-CHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDG 156
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 67/157 (42%), Gaps = 35/157 (22%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYR-----VDEEAEKNFLKESKQGLIYLIDLGSHG 542
+G G FG V++ R G + +K + VDE+ N L+E +Y +H
Sbjct: 17 IGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQ---NALRE-----VY-----AHA 63
Query: 543 LINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPW 602
++ H +V+R+ +D + + EY GG+L + + + + + +
Sbjct: 64 VLGQ--------------HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSY 109
Query: 603 GQRVNFAR---DIAAGMTYLHSMNLIHRDLNSQNCLV 636
+ + G+ Y+HSM+L+H D+ N +
Sbjct: 110 FKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFI 146
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 66/154 (42%), Gaps = 23/154 (14%)
Query: 483 VRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHG 542
+ G LG G FG+V H TG + +K L R Q + L +G
Sbjct: 19 ILGDTLGVGTFGKVKVGKHELTGHKVAVKILNR--------------QKIRSLDVVGK-- 62
Query: 543 LINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPW 602
++ L+ H ++I+ V+ + +V EY++GG L + + G+ L
Sbjct: 63 ------IRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGR-LDE 115
Query: 603 GQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
+ + I +G+ Y H ++HRDL +N L+
Sbjct: 116 KESRRLFQQILSGVDYCHRHMVVHRDLKPENVLL 149
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 563 NVIRFIGV---LYKDRK-LNLVTEYIAGGTLKELLQDPG-QPLPWGQRVNFARDIAAGMT 617
+++R + V LY RK L +V E + GG L +QD G Q + + I +
Sbjct: 71 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 130
Query: 618 YLHSMNLIHRDLNSQNCL 635
YLHS+N+ HRD+ +N L
Sbjct: 131 YLHSINIAHRDVKPENLL 148
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 563 NVIRFIGV---LYKDRK-LNLVTEYIAGGTLKELLQDPG-QPLPWGQRVNFARDIAAGMT 617
+++R + V LY RK L +V E + GG L +QD G Q + + I +
Sbjct: 70 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 129
Query: 618 YLHSMNLIHRDLNSQNCL 635
YLHS+N+ HRD+ +N L
Sbjct: 130 YLHSINIAHRDVKPENLL 147
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 563 NVIRFIGV---LYKDRK-LNLVTEYIAGGTLKELLQDPG-QPLPWGQRVNFARDIAAGMT 617
+++R + V LY RK L +V E + GG L +QD G Q + + I +
Sbjct: 72 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 131
Query: 618 YLHSMNLIHRDLNSQNCL 635
YLHS+N+ HRD+ +N L
Sbjct: 132 YLHSINIAHRDVKPENLL 149
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 563 NVIRFIGV---LYKDRK-LNLVTEYIAGGTLKELLQDPG-QPLPWGQRVNFARDIAAGMT 617
+++R + V LY RK L +V E + GG L +QD G Q + + I +
Sbjct: 70 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 129
Query: 618 YLHSMNLIHRDLNSQNCL 635
YLHS+N+ HRD+ +N L
Sbjct: 130 YLHSINIAHRDVKPENLL 147
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 67/157 (42%), Gaps = 35/157 (22%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYR-----VDEEAEKNFLKESKQGLIYLIDLGSHG 542
+G G FG V++ R G + +K + VDE+ N L+E +Y +H
Sbjct: 17 IGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQ---NALRE-----VY-----AHA 63
Query: 543 LINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPW 602
++ H +V+R+ +D + + EY GG+L + + + + + +
Sbjct: 64 VLGQ--------------HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSY 109
Query: 603 GQRVNFAR---DIAAGMTYLHSMNLIHRDLNSQNCLV 636
+ + G+ Y+HSM+L+H D+ N +
Sbjct: 110 FKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFI 146
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 75/191 (39%), Gaps = 34/191 (17%)
Query: 461 RTRSRSFRVEASKS-----------RIFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMV 509
+ R SFR EAS++ F R LG G +G+V++V +E G +
Sbjct: 27 QPRRVSFRGEASETLQSPGYDPSRPESFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYA 86
Query: 510 LKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIG 569
+K + + K L ++GSH + C ++ G
Sbjct: 87 VKR--------SMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRL--------EQAWEEGG 130
Query: 570 VLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDL 629
+LY L TE + G +L++ + G LP Q + RD + +LHS L+H D+
Sbjct: 131 ILY------LQTE-LCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDV 183
Query: 630 NSQNCLVREVG 640
N + G
Sbjct: 184 KPANIFLGPRG 194
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 67/157 (42%), Gaps = 35/157 (22%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYR-----VDEEAEKNFLKESKQGLIYLIDLGSHG 542
+G G FG V++ R G + +K + VDE+ N L+E +Y +H
Sbjct: 19 IGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQ---NALRE-----VY-----AHA 65
Query: 543 LINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPW 602
++ H +V+R+ +D + + EY GG+L + + + + + +
Sbjct: 66 VLGQ--------------HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSY 111
Query: 603 GQRVNFAR---DIAAGMTYLHSMNLIHRDLNSQNCLV 636
+ + G+ Y+HSM+L+H D+ N +
Sbjct: 112 FKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFI 148
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 563 NVIRFIGV---LYKDRK-LNLVTEYIAGGTLKELLQDPG-QPLPWGQRVNFARDIAAGMT 617
+++R + V LY RK L +V E + GG L +QD G Q + + I +
Sbjct: 116 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 175
Query: 618 YLHSMNLIHRDLNSQNCL 635
YLHS+N+ HRD+ +N L
Sbjct: 176 YLHSINIAHRDVKPENLL 193
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 563 NVIRFIGV---LYKDRK-LNLVTEYIAGGTLKELLQDPG-QPLPWGQRVNFARDIAAGMT 617
+++R + V LY RK L +V E + GG L +QD G Q + + I +
Sbjct: 72 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 131
Query: 618 YLHSMNLIHRDLNSQNCL 635
YLHS+N+ HRD+ +N L
Sbjct: 132 YLHSINIAHRDVKPENLL 149
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 563 NVIRFIGV---LYKDRK-LNLVTEYIAGGTLKELLQDPG-QPLPWGQRVNFARDIAAGMT 617
+++R + V LY RK L +V E + GG L +QD G Q + + I +
Sbjct: 78 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 137
Query: 618 YLHSMNLIHRDLNSQNCL 635
YLHS+N+ HRD+ +N L
Sbjct: 138 YLHSINIAHRDVKPENLL 155
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 563 NVIRFIGV---LYKDRK-LNLVTEYIAGGTLKELLQDPG-QPLPWGQRVNFARDIAAGMT 617
+++R + V LY RK L +V E + GG L +QD G Q + + I +
Sbjct: 122 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 181
Query: 618 YLHSMNLIHRDLNSQNCL 635
YLHS+N+ HRD+ +N L
Sbjct: 182 YLHSINIAHRDVKPENLL 199
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 563 NVIRFIGV---LYKDRK-LNLVTEYIAGGTLKELLQDPG-QPLPWGQRVNFARDIAAGMT 617
+++R + V LY RK L +V E + GG L +QD G Q + + I +
Sbjct: 86 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 145
Query: 618 YLHSMNLIHRDLNSQNCL 635
YLHS+N+ HRD+ +N L
Sbjct: 146 YLHSINIAHRDVKPENLL 163
>pdb|1NYP|A Chain A, 4th Lim Domain Of Pinch Protein
pdb|1U5S|B Chain B, Nmr Structure Of The Complex Between Nck-2 Sh3 Domain
And Pinch-1 Lim4 Domain
Length = 66
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 12 CAGCLNNIVEDEYVQALSQEWHTDCFRCSACDV-MLDNWYFEKDGLLFCKEDYNGKYGE 69
C C I E V A+ ++WH + F C+ C+ L + ++E+ GL +C+ YN +G+
Sbjct: 8 CGACRRPI-EGRVVNAMGKQWHVEHFVCAKCEKPFLGHRHYERKGLAYCETHYNQLFGD 65
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 563 NVIRFIGV---LYKDRK-LNLVTEYIAGGTLKELLQDPG-QPLPWGQRVNFARDIAAGMT 617
+++R + V LY RK L +V E + GG L +QD G Q + + I +
Sbjct: 72 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 131
Query: 618 YLHSMNLIHRDLNSQNCL 635
YLHS+N+ HRD+ +N L
Sbjct: 132 YLHSINIAHRDVKPENLL 149
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 71/173 (41%), Gaps = 32/173 (18%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
+GQG FG+V++ HR+TG+ + LK K ++ K+G +
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALK----------KVLMENEKEGF-------------PI 62
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVL------YKDRKLNLVTEY-IAGGTLKELLQDPGQPL 600
++ +L+ L H NV+ I + Y K ++ + L LL +
Sbjct: 63 TALREIKILQLLKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKF 122
Query: 601 PWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG--SGFDFHLGQIY 651
+ + + G+ Y+H ++HRD+ + N L+ G DF L + +
Sbjct: 123 TLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAF 175
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 563 NVIRFIGV---LYKDRK-LNLVTEYIAGGTLKELLQDPG-QPLPWGQRVNFARDIAAGMT 617
+++R + V LY RK L +V E + GG L +QD G Q + + I +
Sbjct: 77 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 136
Query: 618 YLHSMNLIHRDLNSQNCL 635
YLHS+N+ HRD+ +N L
Sbjct: 137 YLHSINIAHRDVKPENLL 154
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 563 NVIRFIGV---LYKDRK-LNLVTEYIAGGTLKELLQDPG-QPLPWGQRVNFARDIAAGMT 617
+++R + V LY RK L +V E + GG L +QD G Q + + I +
Sbjct: 76 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 135
Query: 618 YLHSMNLIHRDLNSQNCL 635
YLHS+N+ HRD+ +N L
Sbjct: 136 YLHSINIAHRDVKPENLL 153
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 66/161 (40%), Gaps = 32/161 (19%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
+GQG FG+V++ HR+TG+ + LK K ++ K+G +
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALK----------KVLMENEKEGF-------------PI 62
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDR--------KLNLVTEYIAGGTLKELLQDPGQP 599
++ +L+ L H NV+ I + + LV ++ L LL +
Sbjct: 63 TALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCE-HDLAGLLSNVLVK 121
Query: 600 LPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
+ + + G+ Y+H ++HRD+ + N L+ G
Sbjct: 122 FTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDG 162
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 16/100 (16%)
Query: 552 QVAVLRSLHHHNVIRFIGVLYK----DRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
+V L + H N+++FIG + D L L+T + G+L + L+ + W + +
Sbjct: 68 EVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLK--ANVVSWNELCH 125
Query: 608 FARDIAAGMTYLHSM----------NLIHRDLNSQNCLVR 637
A +A G+ YLH + HRD+ S+N L++
Sbjct: 126 IAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLK 165
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 63/149 (42%), Gaps = 26/149 (17%)
Query: 487 LLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINN 546
+LG G F +V+ V R TG++ LK + + F S +
Sbjct: 16 VLGSGAFSEVFLVKQRLTGKLFALKCIKK-----SPAFRDSSLE---------------- 54
Query: 547 LHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRV 606
+++AVL+ + H N++ + LV + ++GG L + + + G +
Sbjct: 55 ----NEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASL 110
Query: 607 NFARDIAAGMTYLHSMNLIHRDLNSQNCL 635
+ + + + YLH ++HRDL +N L
Sbjct: 111 -VIQQVLSAVKYLHENGIVHRDLKPENLL 138
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 71/173 (41%), Gaps = 56/173 (32%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
+GQG FG+V++ HR+TG+ + LK++ ++ K+G +
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKV----------LMENEKEGF-------------PI 62
Query: 548 HCFSQVAVLRSLHHHNVIRFI--------------GVLY------KDRKLNLVTEYIAGG 587
++ +L+ L H NV+ I G +Y + L++ +
Sbjct: 63 TALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKF 122
Query: 588 TLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
TL E+ +RV + + G+ Y+H ++HRD+ + N L+ G
Sbjct: 123 TLSEI-----------KRV--MQMLLNGLYYIHRNKILHRDMKAANVLITRDG 162
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 71/174 (40%), Gaps = 34/174 (19%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
+GQG FG+V++ HR+TG+ + LK K ++ K+G +
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALK----------KVLMENEKEGF-------------PI 61
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDR--------KLNLVTEYIAGGTLKELLQDPGQP 599
++ +L+ L H NV+ I + + LV ++ L LL +
Sbjct: 62 TALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCE-HDLAGLLSNVLVK 120
Query: 600 LPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG--SGFDFHLGQIY 651
+ + + G+ Y+H ++HRD+ + N L+ G DF L + +
Sbjct: 121 FTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAF 174
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/153 (20%), Positives = 65/153 (42%), Gaps = 23/153 (15%)
Query: 487 LLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINN 546
++G+G F V R +RETG+ +K ++ + S ++
Sbjct: 31 VIGKGAFSVVRRCINRETGQQFAVK--------------------IVDVAKFTSSPGLST 70
Query: 547 LHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTL-KELLQDPGQPLPWGQR 605
+ ++ L H +++ + D L +V E++ G L E+++ + +
Sbjct: 71 EDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEA 130
Query: 606 V--NFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
V ++ R I + Y H N+IHRD+ +N L+
Sbjct: 131 VASHYMRQILEALRYCHDNNIIHRDVKPENVLL 163
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 67/156 (42%), Gaps = 23/156 (14%)
Query: 483 VRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHG 542
+RG LG+G F + Y +T +T EV K + K+ L + Q
Sbjct: 45 MRGRFLGKGGFAKCYEITDMDTKEVFAGKVV-------PKSMLLKPHQ------------ 85
Query: 543 LINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPW 602
+++A+ +SL + +V+ F G D + +V E +L EL + + +
Sbjct: 86 ---KEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKR-RKAVTE 141
Query: 603 GQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
+ F R G+ YLH+ +IHRDL N + +
Sbjct: 142 PEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLND 177
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 67/157 (42%), Gaps = 35/157 (22%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYR-----VDEEAEKNFLKESKQGLIYLIDLGSHG 542
+G G FG V++ R G + +K + VDE+ N L+E +Y +H
Sbjct: 15 IGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQ---NALRE-----VY-----AHA 61
Query: 543 LINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPW 602
++ H +V+R+ +D + + EY GG+L + + + + + +
Sbjct: 62 VLGQ--------------HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSY 107
Query: 603 GQRVNFAR---DIAAGMTYLHSMNLIHRDLNSQNCLV 636
+ + G+ Y+HSM+L+H D+ N +
Sbjct: 108 FKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFI 144
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 67/156 (42%), Gaps = 23/156 (14%)
Query: 483 VRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHG 542
+RG LG+G F + Y +T +T EV K + K+ L + Q
Sbjct: 45 MRGRFLGKGGFAKCYEITDMDTKEVFAGKVV-------PKSMLLKPHQ------------ 85
Query: 543 LINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPW 602
+++A+ +SL + +V+ F G D + +V E +L EL + + +
Sbjct: 86 ---KEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKR-RKAVTE 141
Query: 603 GQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
+ F R G+ YLH+ +IHRDL N + +
Sbjct: 142 PEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLND 177
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 71/174 (40%), Gaps = 33/174 (18%)
Query: 477 FRASDLVRGPLLGQGFFGQVYRVTHRETG-EVMVLKELYRVDEEAEKNFLKESKQGLIYL 535
F ++L G LG G FG+V T G E VLK ++ + KE+
Sbjct: 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEA------- 95
Query: 536 IDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ- 594
L++ L S + H N++ +G + ++TEY G L L+
Sbjct: 96 -------LMSELKIMSHLG-----QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRR 143
Query: 595 -------DPGQPLPWGQR-----VNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
DP + ++F+ +A GM +L S N IHRD+ ++N L+
Sbjct: 144 KSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLL 197
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 67/156 (42%), Gaps = 23/156 (14%)
Query: 483 VRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHG 542
+RG LG+G F + Y +T +T EV K + K+ L + Q
Sbjct: 29 MRGRFLGKGGFAKCYEITDMDTKEVFAGKVV-------PKSMLLKPHQ------------ 69
Query: 543 LINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPW 602
+++A+ +SL + +V+ F G D + +V E +L EL + + +
Sbjct: 70 ---KEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKR-RKAVTE 125
Query: 603 GQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
+ F R G+ YLH+ +IHRDL N + +
Sbjct: 126 PEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLND 161
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 67/156 (42%), Gaps = 23/156 (14%)
Query: 483 VRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHG 542
+RG LG+G F + Y +T +T EV K + K+ L + Q
Sbjct: 45 MRGRFLGKGGFAKCYEITDMDTKEVFAGKVV-------PKSMLLKPHQ------------ 85
Query: 543 LINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPW 602
+++A+ +SL + +V+ F G D + +V E +L EL + + +
Sbjct: 86 ---KEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKR-RKAVTE 141
Query: 603 GQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
+ F R G+ YLH+ +IHRDL N + +
Sbjct: 142 PEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLND 177
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Query: 550 FSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFA 609
+ +R H ++++ IGV+ ++ + ++ E G L+ LQ L + +A
Sbjct: 439 LQEALTMRQFDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKFSLDLASLILYA 497
Query: 610 RDIAAGMTYLHSMNLIHRDLNSQNCLV 636
++ + YL S +HRD+ ++N LV
Sbjct: 498 YQLSTALAYLESKRFVHRDIAARNVLV 524
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Query: 550 FSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFA 609
+ +R H ++++ IGV+ ++ + ++ E G L+ LQ L + +A
Sbjct: 439 LQEALTMRQFDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKFSLDLASLILYA 497
Query: 610 RDIAAGMTYLHSMNLIHRDLNSQNCLV 636
++ + YL S +HRD+ ++N LV
Sbjct: 498 YQLSTALAYLESKRFVHRDIAARNVLV 524
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 73/169 (43%), Gaps = 45/169 (26%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
+G+G G V T R +G+++ +K++ + K+ ++ L+
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKM---------DLRKQQRRELL-------------- 195
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
F++V ++R H NV+ +L +V E++ GG L +++ R+N
Sbjct: 196 --FNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH--------TRMN 245
Query: 608 FARDIAA-------GMTYLHSMNLIHRDLNSQNCLVREVG----SGFDF 645
IAA ++ LH+ +IHRD+ S + L+ G S F F
Sbjct: 246 -EEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGF 293
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 70/163 (42%), Gaps = 21/163 (12%)
Query: 475 RIFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIY 534
RI + ++ + +L G FG VY+ GE +K + E E K +K+
Sbjct: 17 RILKETEFKKIKVLSSGAFGTVYKGLWIPEGEK--VKIPVAIKELREATSPKANKE---- 70
Query: 535 LIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ 594
+ V+ S+ + +V R +G+ + L+ + + G L + ++
Sbjct: 71 --------------ILDEAYVMASVDNPHVCRLLGICLTS-TVQLIMQLMPFGCLLDYVR 115
Query: 595 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVR 637
+ + +N+ IA GM YL L+HRDL ++N LV+
Sbjct: 116 EHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVK 158
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 73/169 (43%), Gaps = 45/169 (26%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
+G+G G V T R +G+++ +K++ + K+ ++ L+
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKM---------DLRKQQRRELL-------------- 75
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
F++V ++R H NV+ +L +V E++ GG L +++ R+N
Sbjct: 76 --FNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH--------TRMN 125
Query: 608 FARDIAA-------GMTYLHSMNLIHRDLNSQNCLVREVG----SGFDF 645
IAA ++ LH+ +IHRD+ S + L+ G S F F
Sbjct: 126 -EEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGF 173
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 73/169 (43%), Gaps = 45/169 (26%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
+G+G G V T R +G+++ +K++ + K+ ++ L+
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKM---------DLRKQQRRELL-------------- 73
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
F++V ++R H NV+ +L +V E++ GG L +++ R+N
Sbjct: 74 --FNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH--------TRMN 123
Query: 608 FARDIAA-------GMTYLHSMNLIHRDLNSQNCLVREVG----SGFDF 645
IAA ++ LH+ +IHRD+ S + L+ G S F F
Sbjct: 124 -EEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGF 171
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 78/173 (45%), Gaps = 28/173 (16%)
Query: 470 EASKSRIFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYR--VDEEAEKNFLKE 527
+AS S + DL+R ++G+G + +V V ++T + +K + + V+++ + ++++
Sbjct: 12 KASSSLGLQDFDLLR--VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQT 69
Query: 528 SKQGLIYLIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGG 587
K H F Q + +H ++ + +L V EY+ GG
Sbjct: 70 EK------------------HVFEQAS-----NHPFLVGLHSCFQTESRLFFVIEYVNGG 106
Query: 588 TLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
L +Q + LP ++ +I+ + YLH +I+RDL N L+ G
Sbjct: 107 DLMFHMQRQ-RKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEG 158
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 73/169 (43%), Gaps = 45/169 (26%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
+G+G G V T R +G+++ +K++ + K+ ++ L+
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKM---------DLRKQQRRELL-------------- 64
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
F++V ++R H NV+ +L +V E++ GG L +++ R+N
Sbjct: 65 --FNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH--------TRMN 114
Query: 608 FARDIAA-------GMTYLHSMNLIHRDLNSQNCLVREVG----SGFDF 645
IAA ++ LH+ +IHRD+ S + L+ G S F F
Sbjct: 115 -EEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGF 162
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 561 HHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLH 620
+ N++ I D + LV E + GG++ +Q + + RD+AA + +LH
Sbjct: 70 NKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQ-KHFNEREASRVVRDVAAALDFLH 128
Query: 621 SMNLIHRDLNSQNCL 635
+ + HRDL +N L
Sbjct: 129 TKGIAHRDLKPENIL 143
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 73/169 (43%), Gaps = 45/169 (26%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
+G+G G V T R +G+++ +K++ + K+ ++ L+
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKM---------DLRKQQRRELL-------------- 118
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
F++V ++R H NV+ +L +V E++ GG L +++ R+N
Sbjct: 119 --FNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH--------TRMN 168
Query: 608 FARDIAA-------GMTYLHSMNLIHRDLNSQNCLVREVG----SGFDF 645
IAA ++ LH+ +IHRD+ S + L+ G S F F
Sbjct: 169 -EEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGF 216
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 68/159 (42%), Gaps = 26/159 (16%)
Query: 480 SDLVRGP-LLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDL 538
SD +G +LG+G FG+V + TG+ +K + + + ++ KES
Sbjct: 31 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISK--RQVKQKTDKES---------- 78
Query: 539 GSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTL-KELLQDPG 597
+V +L+ L H N+++ LV E GG L E++
Sbjct: 79 ----------LLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR 128
Query: 598 QPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
R+ R + +G+TY+H ++HRDL +N L+
Sbjct: 129 FSEVDAARI--IRQVLSGITYMHKNKIVHRDLKPENLLL 165
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 73/169 (43%), Gaps = 45/169 (26%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
+G+G G V T R +G+++ +K++ + K+ ++ L+
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKM---------DLRKQQRRELL-------------- 68
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
F++V ++R H NV+ +L +V E++ GG L +++ R+N
Sbjct: 69 --FNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH--------TRMN 118
Query: 608 FARDIAA-------GMTYLHSMNLIHRDLNSQNCLVREVG----SGFDF 645
IAA ++ LH+ +IHRD+ S + L+ G S F F
Sbjct: 119 -EEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGF 166
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 79/176 (44%), Gaps = 44/176 (25%)
Query: 479 ASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDL 538
A +V +G+G FG+V+R R GE + +K E+++ +E++ IY
Sbjct: 8 ARTIVLQESIGKGRFGEVWRGKWR--GEEVAVKIF---SSREERSWFREAE---IY---- 55
Query: 539 GSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDR----KLNLVTEYIAGGTLKELLQ 594
Q +LR H N++ FI KD +L LV++Y G+L + L
Sbjct: 56 -------------QTVMLR---HENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLN 99
Query: 595 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLI---------HRDLNSQNCLVREVGS 641
+ + A A+G+ +LH M ++ HRDL S+N LV++ G+
Sbjct: 100 RYTVTVE--GMIKLALSTASGLAHLH-MEIVGTQGKPAIAHRDLKSKNILVKKNGT 152
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 79/176 (44%), Gaps = 44/176 (25%)
Query: 479 ASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDL 538
A +V +G+G FG+V+R R GE + +K E+++ +E++ IY
Sbjct: 3 ARTIVLQESIGKGRFGEVWRGKWR--GEEVAVKIF---SSREERSWFREAE---IY---- 50
Query: 539 GSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDR----KLNLVTEYIAGGTLKELLQ 594
Q +LR H N++ FI KD +L LV++Y G+L + L
Sbjct: 51 -------------QTVMLR---HENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLN 94
Query: 595 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLI---------HRDLNSQNCLVREVGS 641
+ + A A+G+ +LH M ++ HRDL S+N LV++ G+
Sbjct: 95 RYTVTVE--GMIKLALSTASGLAHLH-MEIVGTQGKPAIAHRDLKSKNILVKKNGT 147
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 79/176 (44%), Gaps = 44/176 (25%)
Query: 479 ASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDL 538
A +V +G+G FG+V+R R GE + +K E+++ +E++ IY
Sbjct: 28 ARTIVLQESIGKGRFGEVWRGKWR--GEEVAVKIF---SSREERSWFREAE---IY---- 75
Query: 539 GSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDR----KLNLVTEYIAGGTLKELLQ 594
Q +LR H N++ FI KD +L LV++Y G+L + L
Sbjct: 76 -------------QTVMLR---HENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLN 119
Query: 595 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLI---------HRDLNSQNCLVREVGS 641
+ + A A+G+ +LH M ++ HRDL S+N LV++ G+
Sbjct: 120 RYTVTVE--GMIKLALSTASGLAHLH-MEIVGTQGKPAIAHRDLKSKNILVKKNGT 172
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 63/151 (41%), Gaps = 17/151 (11%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LG G FG V+ +E + +V+K + ++ E ++++ K G + L
Sbjct: 32 LGSGAFGFVWTAVDKEKNKEVVVK-FIKKEKVLEDCWIEDPKLGKVTL------------ 78
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
++A+L + H N+I+ + + LV E G D L
Sbjct: 79 ----EIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASY 134
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
R + + + YL ++IHRD+ +N ++ E
Sbjct: 135 IFRQLVSAVGYLRLKDIIHRDIKDENIVIAE 165
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 79/176 (44%), Gaps = 44/176 (25%)
Query: 479 ASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDL 538
A +V +G+G FG+V+R R GE + +K E+++ +E++ IY
Sbjct: 2 ARTIVLQESIGKGRFGEVWRGKWR--GEEVAVKIF---SSREERSWFREAE---IY---- 49
Query: 539 GSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDR----KLNLVTEYIAGGTLKELLQ 594
Q +LR H N++ FI KD +L LV++Y G+L + L
Sbjct: 50 -------------QTVMLR---HENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLN 93
Query: 595 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLI---------HRDLNSQNCLVREVGS 641
+ + A A+G+ +LH M ++ HRDL S+N LV++ G+
Sbjct: 94 RYTVTVE--GMIKLALSTASGLAHLH-MEIVGTQGKPAIAHRDLKSKNILVKKNGT 146
>pdb|1CTL|A Chain A, Structure Of The Carboxy-Terminal Lim Domain From The
Cysteine Rich Protein Crp
Length = 85
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 12 CAGCLNNIVEDEYVQALSQEWHTDCFRCSACDVMLDNWYF-EKDGLLFCKEDYNGKYG 68
C C + E V + WH CFRC+ C L++ +KDG ++CK Y +G
Sbjct: 11 CPRCGQAVYAAEKVIGAGKSWHKSCFRCAKCGKSLESTTLADKDGEIYCKGCYAKNFG 68
Score = 37.4 bits (85), Expect = 0.030, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 5/64 (7%)
Query: 69 EACQNCGQMMSGPVMVVGDHK-FHPECFKCTSCSCCIGDGESYALVERS-ILYCGLCYKR 126
+ C CGQ + V+G K +H CF+C C + ES L ++ +YC CY +
Sbjct: 9 DGCPRCGQAVYAAEKVIGAGKSWHKSCFRCAKCGKSL---ESTTLADKDGEIYCKGCYAK 65
Query: 127 QMQP 130
P
Sbjct: 66 NFGP 69
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 79/176 (44%), Gaps = 44/176 (25%)
Query: 479 ASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDL 538
A +V +G+G FG+V+R R GE + +K E+++ +E++ IY
Sbjct: 5 ARTIVLQESIGKGRFGEVWRGKWR--GEEVAVKIF---SSREERSWFREAE---IY---- 52
Query: 539 GSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDR----KLNLVTEYIAGGTLKELLQ 594
Q +LR H N++ FI KD +L LV++Y G+L + L
Sbjct: 53 -------------QTVMLR---HENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLN 96
Query: 595 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLI---------HRDLNSQNCLVREVGS 641
+ + A A+G+ +LH M ++ HRDL S+N LV++ G+
Sbjct: 97 RYTVTVE--GMIKLALSTASGLAHLH-MEIVGTQGKPAIAHRDLKSKNILVKKNGT 149
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 68/159 (42%), Gaps = 26/159 (16%)
Query: 480 SDLVRGP-LLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDL 538
SD +G +LG+G FG+V + TG+ +K + + + ++ KES
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISK--RQVKQKTDKES---------- 72
Query: 539 GSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTL-KELLQDPG 597
+V +L+ L H N+++ LV E GG L E++
Sbjct: 73 ----------LLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR 122
Query: 598 QPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
R+ R + +G+TY+H ++HRDL +N L+
Sbjct: 123 FSEVDAARI--IRQVLSGITYMHKNKIVHRDLKPENLLL 159
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 64/159 (40%), Gaps = 36/159 (22%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
+G G +G V TG + +K+LYR F E +
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYR-------PFQSE----------------LFAK 69
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEY-----IAGGTLKELLQDP--GQPL 600
+ ++ +L+ + H NVI + V D L+ T++ G L +L++ G+
Sbjct: 70 RAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGE-- 127
Query: 601 PWGQRVNF-ARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
R+ F + G+ Y+H+ +IHRDL N V E
Sbjct: 128 ---DRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNE 163
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 13/101 (12%)
Query: 552 QVAVLRSLHHHNVIRFIGVL--YKDRKLNLVTEY--------IAGGTLKELLQDPGQPLP 601
++A+LR L H NVI V + DRK+ L+ +Y I + + P Q LP
Sbjct: 68 EIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQ-LP 126
Query: 602 WGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGSG 642
G + I G+ YLH+ ++HRDL N LV +G G
Sbjct: 127 RGMVKSLLYQILDGIHYLHANWVLHRDLKPANILV--MGEG 165
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
Query: 561 HHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPG---QPLPWGQRVN---FARDIAA 614
H NVIR+ DR L + E + L++L++ + L + N R IA+
Sbjct: 68 HPNVIRYYCSETTDRFLYIALE-LCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIAS 126
Query: 615 GMTYLHSMNLIHRDLNSQNCLV 636
G+ +LHS+ +IHRDL QN LV
Sbjct: 127 GVAHLHSLKIIHRDLKPQNILV 148
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 45/99 (45%), Gaps = 7/99 (7%)
Query: 550 FSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELL-------QDPGQPLPW 602
++ + HH N++ + +L LV + ++GG++ +++ + L
Sbjct: 56 LKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDE 115
Query: 603 GQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS 641
R++ G+ YLH IHRD+ + N L+ E GS
Sbjct: 116 STIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGS 154
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 45/99 (45%), Gaps = 7/99 (7%)
Query: 550 FSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELL-------QDPGQPLPW 602
++ + HH N++ + +L LV + ++GG++ +++ + L
Sbjct: 61 LKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDE 120
Query: 603 GQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGS 641
R++ G+ YLH IHRD+ + N L+ E GS
Sbjct: 121 STIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGS 159
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
Query: 561 HHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPG---QPLPWGQRVN---FARDIAA 614
H NVIR+ DR L + E + L++L++ + L + N R IA+
Sbjct: 86 HPNVIRYYCSETTDRFLYIALE-LCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIAS 144
Query: 615 GMTYLHSMNLIHRDLNSQNCLV 636
G+ +LHS+ +IHRDL QN LV
Sbjct: 145 GVAHLHSLKIIHRDLKPQNILV 166
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
Query: 561 HHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPG---QPLPWGQRVN---FARDIAA 614
H NVIR+ DR L + E + L++L++ + L + N R IA+
Sbjct: 68 HPNVIRYYCSETTDRFLYIALE-LCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIAS 126
Query: 615 GMTYLHSMNLIHRDLNSQNCLV 636
G+ +LHS+ +IHRDL QN LV
Sbjct: 127 GVAHLHSLKIIHRDLKPQNILV 148
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 79/176 (44%), Gaps = 44/176 (25%)
Query: 479 ASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDL 538
A +V +G+G FG+V+R R GE + +K E+++ +E++ IY
Sbjct: 41 ARTIVLQESIGKGRFGEVWRGKWR--GEEVAVKIF---SSREERSWFREAE---IY---- 88
Query: 539 GSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDR----KLNLVTEYIAGGTLKELLQ 594
Q +LR H N++ FI KD +L LV++Y G+L + L
Sbjct: 89 -------------QTVMLR---HENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLN 132
Query: 595 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLI---------HRDLNSQNCLVREVGS 641
+ + A A+G+ +LH M ++ HRDL S+N LV++ G+
Sbjct: 133 RYTVTVE--GMIKLALSTASGLAHLH-MEIVGTQGKPAIAHRDLKSKNILVKKNGT 185
>pdb|1B8T|A Chain A, Solution Structure Of The Chicken Crp1
Length = 192
Score = 40.8 bits (94), Expect = 0.002, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 12 CAGCLNNIVEDEYVQALSQEWHTDCFRCSACDVMLDNWYF-EKDGLLFCKEDYNGKYG 68
C C + E V + WH CFRC+ C L++ +KDG ++CK Y +G
Sbjct: 118 CPRCGQAVYAAEKVIGAGKSWHKSCFRCAKCGKSLESTTLADKDGEIYCKGCYAKNFG 175
Score = 37.7 bits (86), Expect = 0.022, Method: Composition-based stats.
Identities = 39/170 (22%), Positives = 53/170 (31%), Gaps = 54/170 (31%)
Query: 12 CAGCLNNIVEDEYVQALSQEWHTDCFRCSACDVMLDNWYFEKDG-LLFCKEDYNG----- 65
C C + E VQ +H CF C C LD+ G ++CK Y
Sbjct: 10 CGVCQKAVYFAEEVQCEGSSFHKSCFLCMVCKKNLDSTTVAVHGDEIYCKSCYGKKYGPK 69
Query: 66 ---------------------KYGEA----------------------CQNCGQMMSGPV 82
KY E C CGQ +
Sbjct: 70 GKGKGMGAGTLSTDKGESLGIKYEEGQSHRPTNPNASRMAQKVGGSDGCPRCGQAVYAAE 129
Query: 83 MVVGDHK-FHPECFKCTSCSCCIGDGESYALVERS-ILYCGLCYKRQMQP 130
V+G K +H CF+C C + ES L ++ +YC CY + P
Sbjct: 130 KVIGAGKSWHKSCFRCAKCGKSL---ESTTLADKDGEIYCKGCYAKNFGP 176
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
Query: 561 HHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPG---QPLPWGQRVN---FARDIAA 614
H NVIR+ DR L + E + L++L++ + L + N R IA+
Sbjct: 86 HPNVIRYYCSETTDRFLYIALE-LCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIAS 144
Query: 615 GMTYLHSMNLIHRDLNSQNCLV 636
G+ +LHS+ +IHRDL QN LV
Sbjct: 145 GVAHLHSLKIIHRDLKPQNILV 166
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 69/175 (39%), Gaps = 27/175 (15%)
Query: 464 SRSFRVEASKSRIFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVD--EEAE 521
++ F + + R+ R D ++G+G FG+V V + +V +K L + + + AE
Sbjct: 59 AKPFTSKVKQMRLHR-EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAE 117
Query: 522 KNFLKESKQGLIYLIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVT 581
+E + L+ G I LH Q D L LV
Sbjct: 118 TACFREERDVLVN----GDSKWITTLHYAFQ--------------------DDNNLYLVM 153
Query: 582 EYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
+Y GG L LL LP + ++ + +H ++ +HRD+ N L+
Sbjct: 154 DYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILM 208
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 72/188 (38%), Gaps = 34/188 (18%)
Query: 456 ACDLSRTRSRSFRVEASKSRIFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYR 515
A +L+ ++RSF V + + + G G +G V R TG+ + +K++
Sbjct: 36 AKNLALLKARSFDVTFDVGDEYEIIETI-----GNGAYGVVSSARRRLTGQQVAIKKIPN 90
Query: 516 VDEEAEKNFLKESKQGLIYLIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVL---- 571
D+ + N ++ +L+ H N+I +L
Sbjct: 91 A-------------------FDV----VTNAKRTLRELKILKHFKHDNIIAIKDILRPTV 127
Query: 572 -YKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLN 630
Y + K V + L +++ QPL F + G+ Y+HS +IHRDL
Sbjct: 128 PYGEFKSVYVVLDLMESDLHQIIHS-SQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLK 186
Query: 631 SQNCLVRE 638
N LV E
Sbjct: 187 PSNLLVNE 194
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 68/159 (42%), Gaps = 26/159 (16%)
Query: 480 SDLVRGP-LLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDL 538
SD +G +LG+G FG+V + TG+ +K + + + ++ KES
Sbjct: 48 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISK--RQVKQKTDKES---------- 95
Query: 539 GSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTL-KELLQDPG 597
+V +L+ L H N+++ LV E GG L E++
Sbjct: 96 ----------LLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR 145
Query: 598 QPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
R+ R + +G+TY+H ++HRDL +N L+
Sbjct: 146 FSEVDAARI--IRQVLSGITYMHKNKIVHRDLKPENLLL 182
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 68/159 (42%), Gaps = 26/159 (16%)
Query: 480 SDLVRGP-LLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDL 538
SD +G +LG+G FG+V + TG+ +K + + + ++ KES
Sbjct: 49 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISK--RQVKQKTDKES---------- 96
Query: 539 GSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTL-KELLQDPG 597
+V +L+ L H N+++ LV E GG L E++
Sbjct: 97 ----------LLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR 146
Query: 598 QPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
R+ R + +G+TY+H ++HRDL +N L+
Sbjct: 147 FSEVDAARI--IRQVLSGITYMHKNKIVHRDLKPENLLL 183
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 9/104 (8%)
Query: 541 HGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQ 594
+I+ + ++ +L+ + H NVI + V R L LVT ++ G L +++
Sbjct: 60 QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK 118
Query: 595 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
Q L I G+ Y+HS ++IHRDL N V E
Sbjct: 119 --SQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 160
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 77/175 (44%), Gaps = 32/175 (18%)
Query: 470 EASKSRIFRASDLVRGPLLGQGFFGQVYRVTHRETGEV----MVLKELYRVDEEAEKNFL 525
+AS S + DL+R ++G+G + +V V ++T + +V KEL DE+ +++
Sbjct: 44 KASSSLGLQDFDLLR--VIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDI--DWV 99
Query: 526 KESKQGLIYLIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIA 585
+ K H F Q + +H ++ + +L V EY+
Sbjct: 100 QTEK------------------HVFEQAS-----NHPFLVGLHSCFQTESRLFFVIEYVN 136
Query: 586 GGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
GG L +Q + LP ++ +I+ + YLH +I+RDL N L+ G
Sbjct: 137 GGDLMFHMQRQ-RKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEG 190
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 43/101 (42%), Gaps = 6/101 (5%)
Query: 543 LINNLHCFSQVAVLRSLHHHNVIRFIGVL-----YKDRKLNLVTEYIAGGTLKELLQDPG 597
+ N ++ +L+ H N+I +L Y + K V + L +++
Sbjct: 94 VTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHS-S 152
Query: 598 QPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
QPL F + G+ Y+HS +IHRDL N LV E
Sbjct: 153 QPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNE 193
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 564 VIRFIGVLYKDRKLNLVTEYIAGGTLKEL-LQDPGQPLPWGQRVNFARDIAAGMTYLHSM 622
VI V ++ L+ EY AGG + L L + + + + + I G+ YLH
Sbjct: 91 VINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQN 150
Query: 623 NLIHRDLNSQNCLVREVGSGFDFHLGQIYLI 653
N++H DL QN L+ + + LG I ++
Sbjct: 151 NIVHLDLKPQNILLSSI-----YPLGDIKIV 176
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 64/154 (41%), Gaps = 23/154 (14%)
Query: 483 VRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHG 542
V G LG G FG+V H+ TG + +K L R + K ++
Sbjct: 14 VLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKRE------------ 61
Query: 543 LINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPW 602
I NL F H ++I+ V+ +V EY++GG L + + G+
Sbjct: 62 -IQNLKLFR---------HPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEM 111
Query: 603 GQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
R F + I + + Y H ++HRDL +N L+
Sbjct: 112 EARRLF-QQILSAVDYCHRHMVVHRDLKPENVLL 144
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 9/104 (8%)
Query: 541 HGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQ 594
+I+ + ++ +L+ + H NVI + V R L LVT ++ G L +++
Sbjct: 60 QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK 118
Query: 595 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
Q L I G+ Y+HS ++IHRDL N V E
Sbjct: 119 --XQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 160
>pdb|2DAR|A Chain A, Solution Structure Of First Lim Domain Of Enigma-Like Pdz
And Lim Domains Protein
Length = 90
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 65 GKYGEACQNCGQMMSGPVMVVGDHKFHPECFKCTSCSCCIGDGESYA--LVERSILYCGL 122
GK C +C Q++ GP +V +HPE F C C + +Y + E+ LYC L
Sbjct: 22 GKRTPMCAHCNQVIRGPFLVALGKSWHPEEFNCAHCK----NTMAYIGFVEEKGALYCEL 77
Query: 123 CYKR 126
CY++
Sbjct: 78 CYEK 81
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Query: 12 CAGCLNNIVEDEYVQALSQEWHTDCFRCSAC-DVMLDNWYFEKDGLLFCK 60
CA C N ++ ++ AL + WH + F C+ C + M + E+ G L+C+
Sbjct: 28 CAHC-NQVIRGPFLVALGKSWHPEEFNCAHCKNTMAYIGFVEEKGALYCE 76
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 65/158 (41%), Gaps = 37/158 (23%)
Query: 487 LLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINN 546
++G G FG VY+ ++GE++ +K++ + +A KN
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKV--LQGKAFKN----------------------- 61
Query: 547 LHCFSQVAVLRSLHHHNVIRFIGVLY-----KDR-KLNLVTEYIAGGTLK--ELLQDPGQ 598
++ ++R L H N++R Y KD LNLV +Y+ + Q
Sbjct: 62 ----RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQ 117
Query: 599 PLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
LP + + + Y+HS + HRD+ QN L+
Sbjct: 118 TLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL 155
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 60/161 (37%), Gaps = 23/161 (14%)
Query: 478 RASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLID 537
R D G +LG+G F V T +K L +++ +KE+K +
Sbjct: 5 RPEDFKFGKILGEGSFSTVVLARELATSREYAIKIL------EKRHIIKENKVPYVT--- 55
Query: 538 LGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPG 597
+ V+ L H ++ D KL Y G L + ++ G
Sbjct: 56 -------------RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG 102
Query: 598 QPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
R + +I + + YLH +IHRDL +N L+ E
Sbjct: 103 SFDETCTRF-YTAEIVSALEYLHGKGIIHRDLKPENILLNE 142
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 64/154 (41%), Gaps = 23/154 (14%)
Query: 483 VRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHG 542
V G LG G FG+V H+ TG + +K L R + K ++
Sbjct: 14 VLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKRE------------ 61
Query: 543 LINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPW 602
I NL F H ++I+ V+ +V EY++GG L + + G+
Sbjct: 62 -IQNLKLFR---------HPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEM 111
Query: 603 GQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
R F + I + + Y H ++HRDL +N L+
Sbjct: 112 EARRLF-QQILSAVDYCHRHMVVHRDLKPENVLL 144
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 9/104 (8%)
Query: 541 HGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQ 594
+I+ + ++ +L+ + H NVI + V R L LVT ++ G L +++
Sbjct: 60 QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK 118
Query: 595 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
Q L I G+ Y+HS ++IHRDL N V E
Sbjct: 119 --XQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 160
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 60/161 (37%), Gaps = 23/161 (14%)
Query: 478 RASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLID 537
R D G +LG+G F V T +K L +++ +KE+K +
Sbjct: 8 RPEDFKFGKILGEGSFSTVVLARELATSREYAIKIL------EKRHIIKENKVPYVT--- 58
Query: 538 LGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPG 597
+ V+ L H ++ D KL Y G L + ++ G
Sbjct: 59 -------------RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG 105
Query: 598 QPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
R + +I + + YLH +IHRDL +N L+ E
Sbjct: 106 SFDETCTRF-YTAEIVSALEYLHGKGIIHRDLKPENILLNE 145
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 60/161 (37%), Gaps = 23/161 (14%)
Query: 478 RASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLID 537
R D G +LG+G F V T +K L +++ +KE+K +
Sbjct: 7 RPEDFKFGKILGEGSFSTVVLARELATSREYAIKIL------EKRHIIKENKVPYVT--- 57
Query: 538 LGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPG 597
+ V+ L H ++ D KL Y G L + ++ G
Sbjct: 58 -------------RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG 104
Query: 598 QPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
R + +I + + YLH +IHRDL +N L+ E
Sbjct: 105 SFDETCTRF-YTAEIVSALEYLHGKGIIHRDLKPENILLNE 144
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 60/161 (37%), Gaps = 23/161 (14%)
Query: 478 RASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLID 537
R D G +LG+G F V T +K L +++ +KE+K +
Sbjct: 6 RPEDFKFGKILGEGSFSTVVLARELATSREYAIKIL------EKRHIIKENKVPYVT--- 56
Query: 538 LGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPG 597
+ V+ L H ++ D KL Y G L + ++ G
Sbjct: 57 -------------RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG 103
Query: 598 QPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
R + +I + + YLH +IHRDL +N L+ E
Sbjct: 104 SFDETCTRF-YTAEIVSALEYLHGKGIIHRDLKPENILLNE 143
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 73/162 (45%), Gaps = 28/162 (17%)
Query: 481 DLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYR--VDEEAEKNFLKESKQGLIYLIDL 538
DL+R ++G+G + +V V ++T + +K + + V+++ + ++++ K
Sbjct: 8 DLLR--VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEK--------- 56
Query: 539 GSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQ 598
H F Q + +H ++ + +L V EY+ GG L +Q +
Sbjct: 57 ---------HVFEQAS-----NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ-R 101
Query: 599 PLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
LP ++ +I+ + YLH +I+RDL N L+ G
Sbjct: 102 KLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEG 143
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 63/156 (40%), Gaps = 28/156 (17%)
Query: 487 LLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINN 546
L+G+G +G VY + T + + +K++ R+ E+ LI+
Sbjct: 33 LIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFED-----------------------LIDC 69
Query: 547 LHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYI----AGGTLKELLQDPGQPLPW 602
++ +L L +IR ++ D L YI A LK+L + P L
Sbjct: 70 KRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIF-LTE 128
Query: 603 GQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
++ G ++H +IHRDL NCL+ +
Sbjct: 129 EHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQ 164
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 46/98 (46%), Gaps = 8/98 (8%)
Query: 539 GSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQ 598
G G + N ++AVL + H N++ + L L+ + ++GG L + + + G
Sbjct: 58 GKEGSMEN-----EIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGF 112
Query: 599 PLPW-GQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCL 635
R+ F + + YLH + ++HRDL +N L
Sbjct: 113 YTERDASRLIFQ--VLDAVKYLHDLGIVHRDLKPENLL 148
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 73/162 (45%), Gaps = 28/162 (17%)
Query: 481 DLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYR--VDEEAEKNFLKESKQGLIYLIDL 538
DL+R ++G+G + +V V ++T + +K + + V+++ + ++++ K
Sbjct: 12 DLLR--VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEK--------- 60
Query: 539 GSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQ 598
H F Q + +H ++ + +L V EY+ GG L +Q +
Sbjct: 61 ---------HVFEQAS-----NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ-R 105
Query: 599 PLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
LP ++ +I+ + YLH +I+RDL N L+ G
Sbjct: 106 KLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEG 147
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 46/98 (46%), Gaps = 8/98 (8%)
Query: 539 GSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQ 598
G G + N ++AVL + H N++ + L L+ + ++GG L + + + G
Sbjct: 58 GKEGSMEN-----EIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGF 112
Query: 599 PLPW-GQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCL 635
R+ F + + YLH + ++HRDL +N L
Sbjct: 113 YTERDASRLIFQ--VLDAVKYLHDLGIVHRDLKPENLL 148
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 46/98 (46%), Gaps = 8/98 (8%)
Query: 539 GSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQ 598
G G + N ++AVL + H N++ + L L+ + ++GG L + + + G
Sbjct: 58 GKEGSMEN-----EIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGF 112
Query: 599 PLPW-GQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCL 635
R+ F + + YLH + ++HRDL +N L
Sbjct: 113 YTERDASRLIFQ--VLDAVKYLHDLGIVHRDLKPENLL 148
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 76/187 (40%), Gaps = 34/187 (18%)
Query: 459 LSRTRSRSFRVEASKSRIFRASDLVRG-PLLGQGFFGQVYRVTHRETGEVMVLKELYRVD 517
+S+ R +R E +K+ I+ + + +G G +G V +TG + +K+L R
Sbjct: 1 MSQERPTFYRQELNKT-IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSR-- 57
Query: 518 EEAEKNFLKESKQGLIYLIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKL 577
+I+ + ++ +L+ + H NVI + V R L
Sbjct: 58 ---------------------PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSL 96
Query: 578 N------LVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNS 631
LVT ++ G L +++ Q L I G+ Y+HS ++IHRDL
Sbjct: 97 EEFNDVYLVT-HLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 153
Query: 632 QNCLVRE 638
N V E
Sbjct: 154 SNLAVNE 160
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 9/104 (8%)
Query: 541 HGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQ 594
+I+ + ++ +L+ + H NVI + V R L LVT ++ G L +++
Sbjct: 60 QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK 118
Query: 595 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
Q L I G+ Y+HS ++IHRDL N V E
Sbjct: 119 --CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 160
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 67/159 (42%), Gaps = 32/159 (20%)
Query: 487 LLGQGFFGQVYRVTHRETGEVMVLKELYR----VDEEAEKNFLKESKQGLIYLIDLGSHG 542
+LG+G FG+V + T E+ +K L + D++ E +++ L G
Sbjct: 27 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALP-----GKPP 81
Query: 543 LINNLH-CFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLP 601
+ LH CF + DR L V EY+ GG L +Q G+
Sbjct: 82 FLTQLHSCFQTM--------------------DR-LYFVMEYVNGGDLMYHIQQVGR-FK 119
Query: 602 WGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
V +A +IA G+ +L S +I+RDL N ++ G
Sbjct: 120 EPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEG 158
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 66/159 (41%), Gaps = 32/159 (20%)
Query: 487 LLGQGFFGQVYRVTHRETGEVMVLKELYR----VDEEAEKNFLKESKQGLIYLIDLGSHG 542
+LG+G FG+V + T E+ +K L + D++ E +++ L G
Sbjct: 348 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALP-----GKPP 402
Query: 543 LINNLH-CFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLP 601
+ LH CF + +L V EY+ GG L +Q G+
Sbjct: 403 FLTQLHSCFQTMD---------------------RLYFVMEYVNGGDLMYHIQQVGR-FK 440
Query: 602 WGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
V +A +IA G+ +L S +I+RDL N ++ G
Sbjct: 441 EPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEG 479
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 9/104 (8%)
Query: 541 HGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQ 594
+I+ + ++ +L+ + H NVI + V R L LVT ++ G L +++
Sbjct: 60 QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK 118
Query: 595 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
Q L I G+ Y+HS ++IHRDL N V E
Sbjct: 119 --CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 160
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 54/123 (43%), Gaps = 26/123 (21%)
Query: 548 HCFSQVAVLRSLHHHNVIRF--------------IGVLYKDRKLNLVTEYIAGGTLKELL 593
H ++ ++R L H N+++ +G L + + +V EY+ L
Sbjct: 54 HALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLE 113
Query: 594 QDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNC------LVREVGSGFDFHL 647
Q P L R+ F + G+ Y+HS N++HRDL N LV ++G DF L
Sbjct: 114 QGPL--LEEHARL-FMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIG---DFGL 167
Query: 648 GQI 650
+I
Sbjct: 168 ARI 170
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 9/104 (8%)
Query: 541 HGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQ 594
+I+ + ++ +L+ + H NVI + V R L LVT ++ G L +++
Sbjct: 65 QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK 123
Query: 595 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
Q L I G+ Y+HS ++IHRDL N V E
Sbjct: 124 --CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 165
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 9/104 (8%)
Query: 541 HGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQ 594
+I+ + ++ +L+ + H NVI + V R L LVT ++ G L +++
Sbjct: 71 QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK 129
Query: 595 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
Q L I G+ Y+HS ++IHRDL N V E
Sbjct: 130 --CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 171
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 9/104 (8%)
Query: 541 HGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQ 594
+I+ + ++ +L+ + H NVI + V R L LVT ++ G L +++
Sbjct: 59 QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK 117
Query: 595 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
Q L I G+ Y+HS ++IHRDL N V E
Sbjct: 118 --CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 159
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 9/104 (8%)
Query: 541 HGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQ 594
+I+ + ++ +L+ + H NVI + V R L LVT ++ G L +++
Sbjct: 60 QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK 118
Query: 595 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
Q L I G+ Y+HS ++IHRDL N V E
Sbjct: 119 --CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 160
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 9/104 (8%)
Query: 541 HGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQ 594
+I+ + ++ +L+ + H NVI + V R L LVT ++ G L +++
Sbjct: 60 QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK 118
Query: 595 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
Q L I G+ Y+HS ++IHRDL N V E
Sbjct: 119 --CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 160
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 9/104 (8%)
Query: 541 HGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQ 594
+I+ + ++ +L+ + H NVI + V R L LVT ++ G L +++
Sbjct: 60 QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK 118
Query: 595 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
Q L I G+ Y+HS ++IHRDL N V E
Sbjct: 119 --CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 160
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 9/104 (8%)
Query: 541 HGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQ 594
+I+ + ++ +L+ + H NVI + V R L LVT ++ G L +++
Sbjct: 67 QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK 125
Query: 595 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
Q L I G+ Y+HS ++IHRDL N V E
Sbjct: 126 --CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 167
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 76/187 (40%), Gaps = 34/187 (18%)
Query: 459 LSRTRSRSFRVEASKSRIFRASDLVRG-PLLGQGFFGQVYRVTHRETGEVMVLKELYRVD 517
+S+ R +R E +K+ I+ + + +G G +G V +TG + +K+L R
Sbjct: 1 MSQERPTFYRQELNKT-IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSR-- 57
Query: 518 EEAEKNFLKESKQGLIYLIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKL 577
+I+ + ++ +L+ + H NVI + V R L
Sbjct: 58 ---------------------PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSL 96
Query: 578 N------LVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNS 631
LVT ++ G L +++ Q L I G+ Y+HS ++IHRDL
Sbjct: 97 EEFNDVYLVT-HLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 153
Query: 632 QNCLVRE 638
N V E
Sbjct: 154 SNLAVNE 160
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 9/104 (8%)
Query: 541 HGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQ 594
+I+ + ++ +L+ + H NVI + V R L LVT ++ G L +++
Sbjct: 60 QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK 118
Query: 595 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
Q L I G+ Y+HS ++IHRDL N V E
Sbjct: 119 --CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 160
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 76/187 (40%), Gaps = 34/187 (18%)
Query: 459 LSRTRSRSFRVEASKSRIFRASDLVRG-PLLGQGFFGQVYRVTHRETGEVMVLKELYRVD 517
+S+ R +R E +K+ I+ + + +G G +G V +TG + +K+L R
Sbjct: 1 MSQERPTFYRQELNKT-IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSR-- 57
Query: 518 EEAEKNFLKESKQGLIYLIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKL 577
+I+ + ++ +L+ + H NVI + V R L
Sbjct: 58 ---------------------PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSL 96
Query: 578 N------LVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNS 631
LVT ++ G L +++ Q L I G+ Y+HS ++IHRDL
Sbjct: 97 EEFNDVYLVT-HLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 153
Query: 632 QNCLVRE 638
N V E
Sbjct: 154 SNLAVNE 160
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 9/104 (8%)
Query: 541 HGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQ 594
+I+ + ++ +L+ + H NVI + V R L LVT ++ G L +++
Sbjct: 60 QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK 118
Query: 595 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
Q L I G+ Y+HS ++IHRDL N V E
Sbjct: 119 --CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 160
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 9/104 (8%)
Query: 541 HGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQ 594
+I+ + ++ +L+ + H NVI + V R L LVT ++ G L +++
Sbjct: 60 QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK 118
Query: 595 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
Q L I G+ Y+HS ++IHRDL N V E
Sbjct: 119 --CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 160
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 9/104 (8%)
Query: 541 HGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQ 594
+I+ + ++ +L+ + H NVI + V R L LVT ++ G L +++
Sbjct: 62 QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK 120
Query: 595 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
Q L I G+ Y+HS ++IHRDL N V E
Sbjct: 121 --CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 162
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 9/104 (8%)
Query: 541 HGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQ 594
+I+ + ++ +L+ + H NVI + V R L LVT ++ G L +++
Sbjct: 60 QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK 118
Query: 595 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
Q L I G+ Y+HS ++IHRDL N V E
Sbjct: 119 --CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 160
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 9/104 (8%)
Query: 541 HGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQ 594
+I+ + ++ +L+ + H NVI + V R L LVT ++ G L +++
Sbjct: 60 QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK 118
Query: 595 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
Q L I G+ Y+HS ++IHRDL N V E
Sbjct: 119 --CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 160
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 76/187 (40%), Gaps = 34/187 (18%)
Query: 459 LSRTRSRSFRVEASKSRIFRASDLVRG-PLLGQGFFGQVYRVTHRETGEVMVLKELYRVD 517
+S+ R +R E +K+ I+ + + +G G +G V +TG + +K+L R
Sbjct: 1 MSQERPTFYRQELNKT-IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSR-- 57
Query: 518 EEAEKNFLKESKQGLIYLIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKL 577
+I+ + ++ +L+ + H NVI + V R L
Sbjct: 58 ---------------------PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSL 96
Query: 578 N------LVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNS 631
LVT ++ G L +++ Q L I G+ Y+HS ++IHRDL
Sbjct: 97 EEFNDVYLVT-HLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 153
Query: 632 QNCLVRE 638
N V E
Sbjct: 154 SNLAVNE 160
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 9/104 (8%)
Query: 541 HGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQ 594
+I+ + ++ +L+ + H NVI + V R L LVT ++ G L +++
Sbjct: 72 QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK 130
Query: 595 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
Q L I G+ Y+HS ++IHRDL N V E
Sbjct: 131 --CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 172
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 9/104 (8%)
Query: 541 HGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQ 594
+I+ + ++ +L+ + H NVI + V R L LVT ++ G L +++
Sbjct: 60 QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK 118
Query: 595 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
Q L I G+ Y+HS ++IHRDL N V E
Sbjct: 119 --CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 160
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 9/104 (8%)
Query: 541 HGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQ 594
+I+ + ++ +L+ + H NVI + V R L LVT ++ G L +++
Sbjct: 67 QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK 125
Query: 595 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
Q L I G+ Y+HS ++IHRDL N V E
Sbjct: 126 --CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 167
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 66/167 (39%), Gaps = 23/167 (13%)
Query: 487 LLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINN 546
++G+G V R HR TG +K + E L+E ++
Sbjct: 101 VIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATR-----------RE 149
Query: 547 LHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRV 606
H QVA H ++I I + LV + + G L + L + L +
Sbjct: 150 THILRQVA-----GHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTE-KVALSEKETR 203
Query: 607 NFARDIAAGMTYLHSMNLIHRDLNSQNCL------VREVGSGFDFHL 647
+ R + +++LH+ N++HRDL +N L +R GF HL
Sbjct: 204 SIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHL 250
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 9/104 (8%)
Query: 541 HGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQ 594
+I+ + ++ +L+ + H NVI + V R L LVT ++ G L +++
Sbjct: 60 QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK 118
Query: 595 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
Q L I G+ Y+HS ++IHRDL N V E
Sbjct: 119 --CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 160
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 9/104 (8%)
Query: 541 HGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQ 594
+I+ + ++ +L+ + H NVI + V R L LVT ++ G L +++
Sbjct: 67 QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK 125
Query: 595 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
Q L I G+ Y+HS ++IHRDL N V E
Sbjct: 126 --CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 167
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 9/104 (8%)
Query: 541 HGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQ 594
+I+ + ++ +L+ + H NVI + V R L LVT ++ G L +++
Sbjct: 67 QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK 125
Query: 595 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
Q L I G+ Y+HS ++IHRDL N V E
Sbjct: 126 --CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 167
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 9/104 (8%)
Query: 541 HGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQ 594
+I+ + ++ +L+ + H NVI + V R L LVT ++ G L +++
Sbjct: 72 QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK 130
Query: 595 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
Q L I G+ Y+HS ++IHRDL N V E
Sbjct: 131 --CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 172
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 9/103 (8%)
Query: 542 GLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQD 595
+I+ + ++ +L+ + H NVI + V R L LVT ++ G L +++
Sbjct: 67 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK- 124
Query: 596 PGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
Q L I G+ Y+HS ++IHRDL N V E
Sbjct: 125 -CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 166
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 9/103 (8%)
Query: 542 GLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQD 595
+I+ + ++ +L+ + H NVI + V R L LVT ++ G L +++
Sbjct: 71 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK- 128
Query: 596 PGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
Q L I G+ Y+HS ++IHRDL N V E
Sbjct: 129 -CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 170
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 9/104 (8%)
Query: 541 HGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQ 594
+I+ + ++ +L+ + H NVI + V R L LVT ++ G L +++
Sbjct: 62 QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK 120
Query: 595 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
Q L I G+ Y+HS ++IHRDL N V E
Sbjct: 121 --CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 162
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 9/104 (8%)
Query: 541 HGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQ 594
+I+ + ++ +L+ + H NVI + V R L LVT ++ G L +++
Sbjct: 72 QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK 130
Query: 595 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
Q L I G+ Y+HS ++IHRDL N V E
Sbjct: 131 --CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 172
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 9/104 (8%)
Query: 541 HGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQ 594
+I+ + ++ +L+ + H NVI + V R L LVT ++ G L +++
Sbjct: 65 QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK 123
Query: 595 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
Q L I G+ Y+HS ++IHRDL N V E
Sbjct: 124 --CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 165
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 9/104 (8%)
Query: 541 HGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQ 594
+I+ + ++ +L+ + H NVI + V R L LVT ++ G L +++
Sbjct: 62 QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK 120
Query: 595 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
Q L I G+ Y+HS ++IHRDL N V E
Sbjct: 121 --CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 162
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 9/104 (8%)
Query: 541 HGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQ 594
+I+ + ++ +L+ + H NVI + V R L LVT ++ G L +++
Sbjct: 60 QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK 118
Query: 595 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
Q L I G+ Y+HS ++IHRDL N V E
Sbjct: 119 --CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 160
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 9/104 (8%)
Query: 541 HGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQ 594
+I+ + ++ +L+ + H NVI + V R L LVT ++ G L +++
Sbjct: 57 QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK 115
Query: 595 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
Q L I G+ Y+HS ++IHRDL N V E
Sbjct: 116 --CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 157
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 9/104 (8%)
Query: 541 HGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQ 594
+I+ + ++ +L+ + H NVI + V R L LVT ++ G L +++
Sbjct: 83 QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK 141
Query: 595 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
Q L I G+ Y+HS ++IHRDL N V E
Sbjct: 142 --CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 183
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 9/104 (8%)
Query: 541 HGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQ 594
+I+ + ++ +L+ + H NVI + V R L LVT ++ G L +++
Sbjct: 60 QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK 118
Query: 595 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
Q L I G+ Y+HS ++IHRDL N V E
Sbjct: 119 --CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 160
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 46/98 (46%), Gaps = 8/98 (8%)
Query: 539 GSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQ 598
G G + N ++AVL + H N++ + L L+ + ++GG L + + + G
Sbjct: 58 GKEGSMEN-----EIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGF 112
Query: 599 PLPW-GQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCL 635
R+ F + + YLH + ++HRDL +N L
Sbjct: 113 YTERDASRLIFQ--VLDAVKYLHDLGIVHRDLKPENLL 148
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 9/104 (8%)
Query: 541 HGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQ 594
+I+ + ++ +L+ + H NVI + V R L LVT ++ G L +++
Sbjct: 80 QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK 138
Query: 595 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
Q L I G+ Y+HS ++IHRDL N V E
Sbjct: 139 --CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 180
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 65/158 (41%), Gaps = 37/158 (23%)
Query: 487 LLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINN 546
++G G FG VY+ ++GE++ +K++ + +A KN
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKV--LQGKAFKN----------------------- 61
Query: 547 LHCFSQVAVLRSLHHHNVIRFIGVLY-----KDR-KLNLVTEYIAGGTLK--ELLQDPGQ 598
++ ++R L H N++R Y KD LNLV +Y+ + Q
Sbjct: 62 ----RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ 117
Query: 599 PLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
LP + + + Y+HS + HRD+ QN L+
Sbjct: 118 TLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL 155
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 9/104 (8%)
Query: 541 HGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQ 594
+I+ + ++ +L+ + H NVI + V R L LVT ++ G L +++
Sbjct: 79 QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK 137
Query: 595 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
Q L I G+ Y+HS ++IHRDL N V E
Sbjct: 138 --CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 179
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 65/158 (41%), Gaps = 37/158 (23%)
Query: 487 LLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINN 546
++G G FG VY+ ++GE++ +K++ + +A KN
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKV--LQGKAFKN----------------------- 61
Query: 547 LHCFSQVAVLRSLHHHNVIRFIGVLY-----KDR-KLNLVTEYIAGGTLK--ELLQDPGQ 598
++ ++R L H N++R Y KD LNLV +Y+ + Q
Sbjct: 62 ----RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ 117
Query: 599 PLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
LP + + + Y+HS + HRD+ QN L+
Sbjct: 118 TLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL 155
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 9/104 (8%)
Query: 541 HGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQ 594
+I+ + ++ +L+ + H NVI + V R L LVT ++ G L +++
Sbjct: 56 QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK 114
Query: 595 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
Q L I G+ Y+HS ++IHRDL N V E
Sbjct: 115 --CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 156
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 43/97 (44%), Gaps = 16/97 (16%)
Query: 559 LHHHNVIRFI---GVLYKDRKLN--LVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIA 613
+ H N+ RFI + D ++ LV EY G+L + L W A +
Sbjct: 64 MEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLS--LHTSDWVSSCRLAHSVT 121
Query: 614 AGMTYLHSM---------NLIHRDLNSQNCLVREVGS 641
G+ YLH+ + HRDLNS+N LV+ G+
Sbjct: 122 RGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGT 158
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 9/104 (8%)
Query: 541 HGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQ 594
+I+ + ++ +L+ + H NVI + V R L LVT ++ G L +++
Sbjct: 65 QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK 123
Query: 595 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
Q L I G+ Y+HS ++IHRDL N V E
Sbjct: 124 --CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 165
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/196 (20%), Positives = 79/196 (40%), Gaps = 40/196 (20%)
Query: 453 LRPACDLSRTRSRSF-RVEASKSRIFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLK 511
L P +S R + F + + +K+ V +G G +G V + +GE + +K
Sbjct: 14 LVPRGSMSLIRKKGFYKQDVNKTAWELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIK 73
Query: 512 ELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNLHCFSQVAVLRSLHHHNVI------ 565
+L R + + F K + + L+ L + +I L F+ + LR+ + ++
Sbjct: 74 KLSRPFQS--EIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQT 131
Query: 566 ---RFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSM 622
+ +G+ + + K+ +Y+ LK G+ Y+HS
Sbjct: 132 DLQKIMGMEFSEEKI----QYLVYQMLK------------------------GLKYIHSA 163
Query: 623 NLIHRDLNSQNCLVRE 638
++HRDL N V E
Sbjct: 164 GVVHRDLKPGNLAVNE 179
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 9/104 (8%)
Query: 541 HGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQ 594
+I+ + ++ +L+ + H NVI + V R L LVT ++ G L +++
Sbjct: 57 QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK 115
Query: 595 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
Q L I G+ Y+HS ++IHRDL N V E
Sbjct: 116 --CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 157
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 9/104 (8%)
Query: 541 HGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQ 594
+I+ + ++ +L+ + H NVI + V R L LVT ++ G L +++
Sbjct: 83 QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK 141
Query: 595 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
Q L I G+ Y+HS ++IHRDL N V E
Sbjct: 142 --CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 183
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 9/103 (8%)
Query: 542 GLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQD 595
+I+ + ++ +L+ + H NVI + V R L LVT ++ G L +++
Sbjct: 63 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK- 120
Query: 596 PGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
Q L I G+ Y+HS ++IHRDL N V E
Sbjct: 121 -CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 162
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 76/187 (40%), Gaps = 34/187 (18%)
Query: 459 LSRTRSRSFRVEASKSRIFRASDLVRG-PLLGQGFFGQVYRVTHRETGEVMVLKELYRVD 517
+S+ R +R E +K+ I+ + + +G G +G V +TG + +K+L R
Sbjct: 20 MSQERPTFYRQELNKT-IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSR-- 76
Query: 518 EEAEKNFLKESKQGLIYLIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKL 577
+I+ + ++ +L+ + H NVI + V R L
Sbjct: 77 ---------------------PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSL 115
Query: 578 N------LVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNS 631
LVT ++ G L +++ Q L I G+ Y+HS ++IHRDL
Sbjct: 116 EEFNDVYLVT-HLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 172
Query: 632 QNCLVRE 638
N V E
Sbjct: 173 SNLAVNE 179
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 76/187 (40%), Gaps = 34/187 (18%)
Query: 459 LSRTRSRSFRVEASKSRIFRASDLVRG-PLLGQGFFGQVYRVTHRETGEVMVLKELYRVD 517
+S+ R +R E +K+ I+ + + +G G +G V +TG + +K+L R
Sbjct: 21 MSQERPTFYRQELNKT-IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSR-- 77
Query: 518 EEAEKNFLKESKQGLIYLIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKL 577
+I+ + ++ +L+ + H NVI + V R L
Sbjct: 78 ---------------------PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSL 116
Query: 578 N------LVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNS 631
LVT ++ G L +++ Q L I G+ Y+HS ++IHRDL
Sbjct: 117 EEFNDVYLVT-HLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 173
Query: 632 QNCLVRE 638
N V E
Sbjct: 174 SNLAVNE 180
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 9/103 (8%)
Query: 542 GLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQD 595
+I+ + ++ +L+ + H NVI + V R L LVT ++ G L +++
Sbjct: 66 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK- 123
Query: 596 PGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
Q L I G+ Y+HS ++IHRDL N V E
Sbjct: 124 -CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 165
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 9/104 (8%)
Query: 541 HGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQ 594
+I+ + ++ +L+ + H NVI + V R L LVT ++ G L +++
Sbjct: 58 QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK 116
Query: 595 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
Q L I G+ Y+HS ++IHRDL N V E
Sbjct: 117 --CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 158
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 9/104 (8%)
Query: 541 HGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQ 594
+I+ + ++ +L+ + H NVI + V R L LVT ++ G L +++
Sbjct: 71 QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK 129
Query: 595 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
Q L I G+ Y+HS ++IHRDL N V E
Sbjct: 130 --CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 171
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 62/157 (39%), Gaps = 32/157 (20%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
+G G +G V +TG + +K+L R +I+
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSR-----------------------PFQSIIHAK 62
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQDPGQPLP 601
+ ++ +L+ + H NVI + V R L LVT ++ G L +++ Q L
Sbjct: 63 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK--CQKLT 119
Query: 602 WGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
I G+ Y+HS ++IHRDL N V E
Sbjct: 120 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 156
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 63/158 (39%), Gaps = 37/158 (23%)
Query: 487 LLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINN 546
++G G FG VY+ ++GE++ +K++ + +K F Q
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQ---------------- 65
Query: 547 LHCFSQVAVLRSLHHHNVIRFIGVLY-----KDR-KLNLVTEYIAGGTLK--ELLQDPGQ 598
++R L H N++R Y KD LNLV +Y+ + Q
Sbjct: 66 --------IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ 117
Query: 599 PLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
LP + + + Y+HS + HRD+ QN L+
Sbjct: 118 TLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL 155
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 63/158 (39%), Gaps = 37/158 (23%)
Query: 487 LLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINN 546
++G G FG VY+ ++GE++ +K++ + +K F Q
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQ---------------- 65
Query: 547 LHCFSQVAVLRSLHHHNVIRFIGVLY-----KDR-KLNLVTEYIAGGTLK--ELLQDPGQ 598
++R L H N++R Y KD LNLV +Y+ + Q
Sbjct: 66 --------IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ 117
Query: 599 PLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
LP + + + Y+HS + HRD+ QN L+
Sbjct: 118 TLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL 155
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 63/158 (39%), Gaps = 37/158 (23%)
Query: 487 LLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINN 546
++G G FG VY+ ++GE++ +K++ + +K F Q
Sbjct: 28 VIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQ---------------- 66
Query: 547 LHCFSQVAVLRSLHHHNVIRFIGVLY-----KDR-KLNLVTEYIAGGTLK--ELLQDPGQ 598
++R L H N++R Y KD LNLV +Y+ + Q
Sbjct: 67 --------IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ 118
Query: 599 PLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
LP + + + Y+HS + HRD+ QN L+
Sbjct: 119 TLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL 156
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 9/103 (8%)
Query: 542 GLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQD 595
+I+ + ++ +L+ + H NVI + V R L LVT ++ G L +++
Sbjct: 81 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK- 138
Query: 596 PGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
Q L I G+ Y+HS ++IHRDL N V E
Sbjct: 139 -CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 180
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 9/103 (8%)
Query: 542 GLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQD 595
+I+ + ++ +L+ + H NVI + V R L LVT ++ G L +++
Sbjct: 67 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK- 124
Query: 596 PGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
Q L I G+ Y+HS ++IHRDL N V E
Sbjct: 125 -CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 166
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 62/157 (39%), Gaps = 32/157 (20%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
+G G +G V +TG + +K+L R +I+
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSR-----------------------PFQSIIHAK 62
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQDPGQPLP 601
+ ++ +L+ + H NVI + V R L LVT ++ G L +++ Q L
Sbjct: 63 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK--CQKLT 119
Query: 602 WGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
I G+ Y+HS ++IHRDL N V E
Sbjct: 120 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 156
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 62/158 (39%), Gaps = 37/158 (23%)
Query: 487 LLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINN 546
++G G FG VY+ ++GE++ +K++ + +K F Q
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQ---------------- 65
Query: 547 LHCFSQVAVLRSLHHHNVIRFIGVLYKDRK------LNLVTEYIAGGTLK--ELLQDPGQ 598
++R L H N++R Y + LNLV +Y+ + Q
Sbjct: 66 --------IMRKLDHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQ 117
Query: 599 PLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
LP + + + Y+HS + HRD+ QN L+
Sbjct: 118 TLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL 155
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 63/158 (39%), Gaps = 37/158 (23%)
Query: 487 LLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINN 546
++G G FG VY+ ++GE++ +K++ + +K F Q
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQ---------------- 65
Query: 547 LHCFSQVAVLRSLHHHNVIRFIGVLY-----KDR-KLNLVTEYIAGGTLK--ELLQDPGQ 598
++R L H N++R Y KD LNLV +Y+ + Q
Sbjct: 66 --------IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ 117
Query: 599 PLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
LP + + + Y+HS + HRD+ QN L+
Sbjct: 118 TLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL 155
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 66/159 (41%), Gaps = 26/159 (16%)
Query: 480 SDLVRGP-LLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDL 538
SD +G +LG+G FG+V + TG+ +K + + + ++ KES
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISK--RQVKQKTDKES---------- 72
Query: 539 GSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTL-KELLQDPG 597
+V +L+ L H N+ + LV E GG L E++
Sbjct: 73 ----------LLREVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR 122
Query: 598 QPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
R+ R + +G+TY H ++HRDL +N L+
Sbjct: 123 FSEVDAARI--IRQVLSGITYXHKNKIVHRDLKPENLLL 159
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 63/158 (39%), Gaps = 37/158 (23%)
Query: 487 LLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINN 546
++G G FG VY+ ++GE++ +K++ + +K F Q
Sbjct: 55 VIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQ---------------- 93
Query: 547 LHCFSQVAVLRSLHHHNVIRFIGVLY-----KDR-KLNLVTEYIAGGTLK--ELLQDPGQ 598
++R L H N++R Y KD LNLV +Y+ + Q
Sbjct: 94 --------IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ 145
Query: 599 PLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
LP + + + Y+HS + HRD+ QN L+
Sbjct: 146 TLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL 183
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 70/167 (41%), Gaps = 28/167 (16%)
Query: 478 RASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKEL-YRVDEEAEKNFLKESKQGLIYLI 536
+A DL LG+G +G V + H +G++ +K + V+ + +K L + +
Sbjct: 32 KADDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXD--------L 83
Query: 537 DLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-- 594
D+ R++ + F G L+++ + + E K Q
Sbjct: 84 DISX----------------RTVDCPFTVTFYGALFREGDVWICXELXDTSLDKFYKQVI 127
Query: 595 DPGQPLPWGQRVNFARDIAAGMTYLHS-MNLIHRDLNSQNCLVREVG 640
D GQ +P A I + +LHS +++IHRD+ N L+ +G
Sbjct: 128 DKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALG 174
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 63/158 (39%), Gaps = 37/158 (23%)
Query: 487 LLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINN 546
++G G FG VY+ ++GE++ +K++ + +K F Q
Sbjct: 39 VIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQ---------------- 77
Query: 547 LHCFSQVAVLRSLHHHNVIRFIGVLY-----KDR-KLNLVTEYIAGGTLK--ELLQDPGQ 598
++R L H N++R Y KD LNLV +Y+ + Q
Sbjct: 78 --------IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ 129
Query: 599 PLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
LP + + + Y+HS + HRD+ QN L+
Sbjct: 130 TLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL 167
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 63/158 (39%), Gaps = 37/158 (23%)
Query: 487 LLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINN 546
++G G FG VY+ ++GE++ +K++ + +K F Q
Sbjct: 35 VIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQ---------------- 73
Query: 547 LHCFSQVAVLRSLHHHNVIRFIGVLY-----KDR-KLNLVTEYIAGGTLK--ELLQDPGQ 598
++R L H N++R Y KD LNLV +Y+ + Q
Sbjct: 74 --------IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ 125
Query: 599 PLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
LP + + + Y+HS + HRD+ QN L+
Sbjct: 126 TLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL 163
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 63/158 (39%), Gaps = 37/158 (23%)
Query: 487 LLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINN 546
++G G FG VY+ ++GE++ +K++ + +K F Q
Sbjct: 32 VIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQ---------------- 70
Query: 547 LHCFSQVAVLRSLHHHNVIRFIGVLY-----KDR-KLNLVTEYIAGGTLK--ELLQDPGQ 598
++R L H N++R Y KD LNLV +Y+ + Q
Sbjct: 71 --------IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ 122
Query: 599 PLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
LP + + + Y+HS + HRD+ QN L+
Sbjct: 123 TLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL 160
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 63/158 (39%), Gaps = 37/158 (23%)
Query: 487 LLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINN 546
++G G FG VY+ ++GE++ +K++ + +K F Q
Sbjct: 46 VIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQ---------------- 84
Query: 547 LHCFSQVAVLRSLHHHNVIRFIGVLY-----KDR-KLNLVTEYIAGGTLK--ELLQDPGQ 598
++R L H N++R Y KD LNLV +Y+ + Q
Sbjct: 85 --------IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ 136
Query: 599 PLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
LP + + + Y+HS + HRD+ QN L+
Sbjct: 137 TLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL 174
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 63/158 (39%), Gaps = 37/158 (23%)
Query: 487 LLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINN 546
++G G FG VY+ ++GE++ +K++ + +K F Q
Sbjct: 31 VIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQ---------------- 69
Query: 547 LHCFSQVAVLRSLHHHNVIRFIGVLY-----KDR-KLNLVTEYIAGGTLK--ELLQDPGQ 598
++R L H N++R Y KD LNLV +Y+ + Q
Sbjct: 70 --------IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ 121
Query: 599 PLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
LP + + + Y+HS + HRD+ QN L+
Sbjct: 122 TLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL 159
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 63/158 (39%), Gaps = 37/158 (23%)
Query: 487 LLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINN 546
++G G FG VY+ ++GE++ +K++ + +K F Q
Sbjct: 63 VIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQ---------------- 101
Query: 547 LHCFSQVAVLRSLHHHNVIRFIGVLY-----KDR-KLNLVTEYIAGGTLK--ELLQDPGQ 598
++R L H N++R Y KD LNLV +Y+ + Q
Sbjct: 102 --------IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ 153
Query: 599 PLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
LP + + + Y+HS + HRD+ QN L+
Sbjct: 154 TLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL 191
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 63/158 (39%), Gaps = 37/158 (23%)
Query: 487 LLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINN 546
++G G FG VY+ ++GE++ +K++ + +K F Q
Sbjct: 40 VIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQ---------------- 78
Query: 547 LHCFSQVAVLRSLHHHNVIRFIGVLY-----KDR-KLNLVTEYIAGGTLK--ELLQDPGQ 598
++R L H N++R Y KD LNLV +Y+ + Q
Sbjct: 79 --------IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ 130
Query: 599 PLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
LP + + + Y+HS + HRD+ QN L+
Sbjct: 131 TLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL 168
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 63/158 (39%), Gaps = 37/158 (23%)
Query: 487 LLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINN 546
++G G FG VY+ ++GE++ +K++ + +K F Q
Sbjct: 39 VIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQ---------------- 77
Query: 547 LHCFSQVAVLRSLHHHNVIRFIGVLY-----KDR-KLNLVTEYIAGGTLK--ELLQDPGQ 598
++R L H N++R Y KD LNLV +Y+ + Q
Sbjct: 78 --------IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ 129
Query: 599 PLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
LP + + + Y+HS + HRD+ QN L+
Sbjct: 130 TLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL 167
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 63/158 (39%), Gaps = 37/158 (23%)
Query: 487 LLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINN 546
++G G FG VY+ ++GE++ +K++ + +K F Q
Sbjct: 61 VIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQ---------------- 99
Query: 547 LHCFSQVAVLRSLHHHNVIRFIGVLY-----KDR-KLNLVTEYIAGGTLK--ELLQDPGQ 598
++R L H N++R Y KD LNLV +Y+ + Q
Sbjct: 100 --------IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ 151
Query: 599 PLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
LP + + + Y+HS + HRD+ QN L+
Sbjct: 152 TLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL 189
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 63/158 (39%), Gaps = 37/158 (23%)
Query: 487 LLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINN 546
++G G FG VY+ ++GE++ +K++ + +K F Q
Sbjct: 61 VIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQ---------------- 99
Query: 547 LHCFSQVAVLRSLHHHNVIRFIGVLY-----KDR-KLNLVTEYIAGGTLK--ELLQDPGQ 598
++R L H N++R Y KD LNLV +Y+ + Q
Sbjct: 100 --------IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ 151
Query: 599 PLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
LP + + + Y+HS + HRD+ QN L+
Sbjct: 152 TLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL 189
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 63/158 (39%), Gaps = 37/158 (23%)
Query: 487 LLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINN 546
++G G FG VY+ ++GE++ +K++ + +K F Q
Sbjct: 65 VIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQ---------------- 103
Query: 547 LHCFSQVAVLRSLHHHNVIRFIGVLY-----KDR-KLNLVTEYIAGGTLK--ELLQDPGQ 598
++R L H N++R Y KD LNLV +Y+ + Q
Sbjct: 104 --------IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ 155
Query: 599 PLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
LP + + + Y+HS + HRD+ QN L+
Sbjct: 156 TLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL 193
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 9/103 (8%)
Query: 542 GLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQD 595
+I+ + ++ +L+ + H NVI + V R L LVT ++ G L +++
Sbjct: 67 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK- 124
Query: 596 PGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
Q L I G+ Y+HS ++IHRDL N V E
Sbjct: 125 -CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 166
>pdb|2D8Y|A Chain A, Solution Structure Of The Lim Domain Of Epithelial
Protein Lost In Neoplasm
Length = 91
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Query: 5 ETPEILTCAGCLNNIVEDEYVQALSQEWHTDCFRCSACDVMLD-NWYFEKDGLLFCKEDY 63
+ P TC C + E + A Q +H CFRCS C+ L Y G ++CK +
Sbjct: 11 QAPARETCVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHF 70
Query: 64 N 64
N
Sbjct: 71 N 71
>pdb|2O13|A Chain A, Solution Structure Of The C-Terminal Lim Domain Of
MlpCRP3
Length = 58
Score = 38.1 bits (87), Expect = 0.017, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 12 CAGCLNNIVEDEYVQALSQEWHTDCFRCSACDVMLDNWYF-EKDGLLFCKEDY 63
C C ++ E V + WH CFRC+ C L++ +KDG L+CK Y
Sbjct: 2 CPRCGKSVYAAEKVMGGGKPWHKTCFRCAICGKSLESTNVTDKDGELYCKVCY 54
Score = 30.8 bits (68), Expect = 2.6, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Query: 71 CQNCGQMMSGPVMVVGDHK-FHPECFKCTSCSCCIGDGESYALVERS-ILYCGLCYKR 126
C CG+ + V+G K +H CF+C C + ES + ++ LYC +CY +
Sbjct: 2 CPRCGKSVYAAEKVMGGGKPWHKTCFRCAICGKSL---ESTNVTDKDGELYCKVCYAK 56
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Query: 555 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAA 614
V+ L H ++ D KL Y G L + ++ G R + +I +
Sbjct: 83 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVS 141
Query: 615 GMTYLHSMNLIHRDLNSQNCLVRE 638
+ YLH +IHRDL +N L+ E
Sbjct: 142 ALEYLHGKGIIHRDLKPENILLNE 165
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 9/103 (8%)
Query: 542 GLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQD 595
+I+ + ++ +L+ + H NVI + V R L LVT ++ G L +++
Sbjct: 67 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK- 124
Query: 596 PGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
Q L I G+ Y+HS ++IHRDL N V E
Sbjct: 125 -CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 166
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Query: 555 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAA 614
V+ L H ++ D KL Y G L + ++ G R + +I +
Sbjct: 85 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVS 143
Query: 615 GMTYLHSMNLIHRDLNSQNCLVRE 638
+ YLH +IHRDL +N L+ E
Sbjct: 144 ALEYLHGKGIIHRDLKPENILLNE 167
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Query: 555 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAA 614
V+ L H ++ D KL Y G L + ++ G R + +I +
Sbjct: 82 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVS 140
Query: 615 GMTYLHSMNLIHRDLNSQNCLVRE 638
+ YLH +IHRDL +N L+ E
Sbjct: 141 ALEYLHGKGIIHRDLKPENILLNE 164
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Query: 555 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAA 614
V+ L H ++ D KL Y G L + ++ G R + +I +
Sbjct: 86 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVS 144
Query: 615 GMTYLHSMNLIHRDLNSQNCLVRE 638
+ YLH +IHRDL +N L+ E
Sbjct: 145 ALEYLHGKGIIHRDLKPENILLNE 168
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Query: 555 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAA 614
V+ L H ++ D KL Y G L + ++ G R + +I +
Sbjct: 86 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVS 144
Query: 615 GMTYLHSMNLIHRDLNSQNCLVRE 638
+ YLH +IHRDL +N L+ E
Sbjct: 145 ALEYLHGKGIIHRDLKPENILLNE 168
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Query: 555 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAA 614
V+ L H ++ D KL Y G L + ++ G R + +I +
Sbjct: 82 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVS 140
Query: 615 GMTYLHSMNLIHRDLNSQNCLVRE 638
+ YLH +IHRDL +N L+ E
Sbjct: 141 ALEYLHGKGIIHRDLKPENILLNE 164
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Query: 555 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAA 614
V+ L H ++ D KL Y G L + ++ G R + +I +
Sbjct: 83 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVS 141
Query: 615 GMTYLHSMNLIHRDLNSQNCLVRE 638
+ YLH +IHRDL +N L+ E
Sbjct: 142 ALEYLHGKGIIHRDLKPENILLNE 165
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Query: 555 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAA 614
V+ L H ++ D KL Y G L + ++ G R + +I +
Sbjct: 85 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVS 143
Query: 615 GMTYLHSMNLIHRDLNSQNCLVRE 638
+ YLH +IHRDL +N L+ E
Sbjct: 144 ALEYLHGKGIIHRDLKPENILLNE 167
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Query: 555 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAA 614
V+ L H ++ D KL Y G L + ++ G R + +I +
Sbjct: 67 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVS 125
Query: 615 GMTYLHSMNLIHRDLNSQNCLVRE 638
+ YLH +IHRDL +N L+ E
Sbjct: 126 ALEYLHGKGIIHRDLKPENILLNE 149
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 65/155 (41%), Gaps = 25/155 (16%)
Query: 487 LLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINN 546
LLG+G FG+V V + TG +K L K+ +I ++
Sbjct: 15 LLGKGTFGKVILVREKATGRYYAMKIL--------------RKEVIIAKDEVA------- 53
Query: 547 LHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRV 606
H ++ VL++ H + +L V EY GG L + + +R
Sbjct: 54 -HTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERA 110
Query: 607 NF-ARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
F +I + + YLHS ++++RD+ +N ++ + G
Sbjct: 111 RFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDG 145
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 63/158 (39%), Gaps = 37/158 (23%)
Query: 487 LLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINN 546
++G G FG VY+ ++GE++ +K++ + +K F Q
Sbjct: 106 VIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQ---------------- 144
Query: 547 LHCFSQVAVLRSLHHHNVIRFIGVLY-----KDR-KLNLVTEYIAGGTLK--ELLQDPGQ 598
++R L H N++R Y KD LNLV +Y+ + Q
Sbjct: 145 --------IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ 196
Query: 599 PLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
LP + + + Y+HS + HRD+ QN L+
Sbjct: 197 TLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL 234
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Query: 555 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAA 614
V+ L H ++ D KL Y G L + ++ G R + +I +
Sbjct: 85 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVS 143
Query: 615 GMTYLHSMNLIHRDLNSQNCLVRE 638
+ YLH +IHRDL +N L+ E
Sbjct: 144 ALEYLHGKGIIHRDLKPENILLNE 167
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Query: 555 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAA 614
V+ L H ++ D KL Y G L + ++ G R + +I +
Sbjct: 83 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVS 141
Query: 615 GMTYLHSMNLIHRDLNSQNCLVRE 638
+ YLH +IHRDL +N L+ E
Sbjct: 142 ALEYLHGKGIIHRDLKPENILLNE 165
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Query: 555 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAA 614
V+ L H ++ D KL Y G L + ++ G R + +I +
Sbjct: 85 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVS 143
Query: 615 GMTYLHSMNLIHRDLNSQNCLVRE 638
+ YLH +IHRDL +N L+ E
Sbjct: 144 ALEYLHGKGIIHRDLKPENILLNE 167
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Query: 555 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAA 614
V+ L H ++ D KL Y G L + ++ G R + +I +
Sbjct: 88 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVS 146
Query: 615 GMTYLHSMNLIHRDLNSQNCLVRE 638
+ YLH +IHRDL +N L+ E
Sbjct: 147 ALEYLHGKGIIHRDLKPENILLNE 170
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Query: 555 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAA 614
V+ L H ++ D KL Y G L + ++ G R + +I +
Sbjct: 83 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVS 141
Query: 615 GMTYLHSMNLIHRDLNSQNCLVRE 638
+ YLH +IHRDL +N L+ E
Sbjct: 142 ALEYLHGKGIIHRDLKPENILLNE 165
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 81/191 (42%), Gaps = 35/191 (18%)
Query: 459 LSRTRSRSFRVEASKSRIFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDE 518
+S S ++ + F A DL +G+G +G V ++ H+ +G++M +K + +
Sbjct: 1 MSIESSGKLKISPEQHWDFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVD 60
Query: 519 EAEKNFLKESKQGLIYLIDLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLN 578
E KE KQ L+DL V+RS +++F G L+++
Sbjct: 61 E------KEQKQ---LLMDLD--------------VVMRSSDCPYIVQFYGALFREGDCW 97
Query: 579 LVTEYIAGGTLK------ELLQD--PGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLN 630
+ E ++ K +L D P + L ++ A + A ++ +IHRD+
Sbjct: 98 ICMELMSTSFDKFYKYVYSVLDDVIPEEIL---GKITLAT-VKALNHLKENLKIIHRDIK 153
Query: 631 SQNCLVREVGS 641
N L+ G+
Sbjct: 154 PSNILLDRSGN 164
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 65/155 (41%), Gaps = 25/155 (16%)
Query: 487 LLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINN 546
LLG+G FG+V V + TG +K L K+ +I ++
Sbjct: 12 LLGKGTFGKVILVREKATGRYYAMKIL--------------RKEVIIAKDEVA------- 50
Query: 547 LHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRV 606
H ++ VL++ H + +L V EY GG L + + +R
Sbjct: 51 -HTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERA 107
Query: 607 NF-ARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
F +I + + YLHS ++++RD+ +N ++ + G
Sbjct: 108 RFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDG 142
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 65/155 (41%), Gaps = 25/155 (16%)
Query: 487 LLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINN 546
LLG+G FG+V V + TG +K L K+ +I ++
Sbjct: 12 LLGKGTFGKVILVREKATGRYYAMKIL--------------RKEVIIAKDEVA------- 50
Query: 547 LHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRV 606
H ++ VL++ H + +L V EY GG L + + +R
Sbjct: 51 -HTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERA 107
Query: 607 NF-ARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
F +I + + YLHS ++++RD+ +N ++ + G
Sbjct: 108 RFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDG 142
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 65/155 (41%), Gaps = 25/155 (16%)
Query: 487 LLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINN 546
LLG+G FG+V V + TG +K L K+ +I ++
Sbjct: 12 LLGKGTFGKVILVREKATGRYYAMKIL--------------RKEVIIAKDEVA------- 50
Query: 547 LHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRV 606
H ++ VL++ H + +L V EY GG L + + +R
Sbjct: 51 -HTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERA 107
Query: 607 NF-ARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
F +I + + YLHS ++++RD+ +N ++ + G
Sbjct: 108 RFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDG 142
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Query: 550 FSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFA 609
++ V++ L + ++R IG+ + + LV E G L + LQ + + +
Sbjct: 76 LAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQ-NRHVKDKNIIELV 133
Query: 610 RDIAAGMTYLHSMNLIHRDLNSQNCLV 636
++ GM YL N +HRDL ++N L+
Sbjct: 134 HQVSMGMKYLEESNFVHRDLAARNVLL 160
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Query: 550 FSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFA 609
++ V++ L + ++R IG+ + + LV E G L + LQ + + +
Sbjct: 76 LAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQ-NRHVKDKNIIELV 133
Query: 610 RDIAAGMTYLHSMNLIHRDLNSQNCLV 636
++ GM YL N +HRDL ++N L+
Sbjct: 134 HQVSMGMKYLEESNFVHRDLAARNVLL 160
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 64/156 (41%), Gaps = 26/156 (16%)
Query: 487 LLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINN 546
LLG+G FG+V V + TG +K L K+ +I D +H L N
Sbjct: 158 LLGKGTFGKVILVKEKATGRYYAMKIL---------------KKEVIVAKDEVAHTLTEN 202
Query: 547 LHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRV 606
VL++ H + +L V EY GG L + + R
Sbjct: 203 -------RVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGEL--FFHLSRERVFSEDRA 253
Query: 607 NF-ARDIAAGMTYLHS-MNLIHRDLNSQNCLVREVG 640
F +I + + YLHS N+++RDL +N ++ + G
Sbjct: 254 RFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDG 289
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 65/155 (41%), Gaps = 25/155 (16%)
Query: 487 LLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINN 546
LLG+G FG+V V + TG +K L K+ +I ++
Sbjct: 12 LLGKGTFGKVILVREKATGRYYAMKIL--------------RKEVIIAKDEVA------- 50
Query: 547 LHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRV 606
H ++ VL++ H + +L V EY GG L + + +R
Sbjct: 51 -HTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERA 107
Query: 607 NF-ARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
F +I + + YLHS ++++RD+ +N ++ + G
Sbjct: 108 RFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDG 142
>pdb|1X4L|A Chain A, Solution Structure Of Lim Domain In Four And A Half Lim
Domains Protein 2
Length = 72
Score = 37.7 bits (86), Expect = 0.021, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 15/61 (24%)
Query: 23 EYVQALSQEWHTDCFRCSACDVMLDNWYF--EKDGLLFCKEDYNGKYGEACQNCGQMMSG 80
+Y+ ++WH DCF C C + L F E+D +L C +CG+ +SG
Sbjct: 22 KYISFEERQWHNDCFNCKKCSLSLVGRGFLTERDDIL-------------CPDCGKDISG 68
Query: 81 P 81
P
Sbjct: 69 P 69
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Query: 555 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAA 614
V+ L H ++ D KL Y G L + ++ G R + +I +
Sbjct: 85 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVS 143
Query: 615 GMTYLHSMNLIHRDLNSQNCLVRE 638
+ YLH +IHRDL +N L+ E
Sbjct: 144 ALEYLHGKGIIHRDLKPENILLNE 167
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 64/156 (41%), Gaps = 26/156 (16%)
Query: 487 LLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINN 546
LLG+G FG+V V + TG +K L K+ +I D +H L N
Sbjct: 15 LLGKGTFGKVILVKEKATGRYYAMKIL---------------KKEVIVAKDEVAHTLTEN 59
Query: 547 LHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRV 606
VL++ H + +L V EY GG L + + R
Sbjct: 60 -------RVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGEL--FFHLSRERVFSEDRA 110
Query: 607 NF-ARDIAAGMTYLHS-MNLIHRDLNSQNCLVREVG 640
F +I + + YLHS N+++RDL +N ++ + G
Sbjct: 111 RFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDG 146
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 64/156 (41%), Gaps = 26/156 (16%)
Query: 487 LLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINN 546
LLG+G FG+V V + TG +K L K+ +I D +H L N
Sbjct: 155 LLGKGTFGKVILVKEKATGRYYAMKIL---------------KKEVIVAKDEVAHTLTEN 199
Query: 547 LHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRV 606
VL++ H + +L V EY GG L + + R
Sbjct: 200 -------RVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGEL--FFHLSRERVFSEDRA 250
Query: 607 NF-ARDIAAGMTYLHS-MNLIHRDLNSQNCLVREVG 640
F +I + + YLHS N+++RDL +N ++ + G
Sbjct: 251 RFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDG 286
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 64/156 (41%), Gaps = 26/156 (16%)
Query: 487 LLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINN 546
LLG+G FG+V V + TG +K L K+ +I D +H L N
Sbjct: 16 LLGKGTFGKVILVKEKATGRYYAMKIL---------------KKEVIVAKDEVAHTLTEN 60
Query: 547 LHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRV 606
VL++ H + +L V EY GG L + + R
Sbjct: 61 -------RVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGEL--FFHLSRERVFSEDRA 111
Query: 607 NF-ARDIAAGMTYLHS-MNLIHRDLNSQNCLVREVG 640
F +I + + YLHS N+++RDL +N ++ + G
Sbjct: 112 RFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDG 147
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 65/155 (41%), Gaps = 25/155 (16%)
Query: 487 LLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINN 546
LLG+G FG+V V + TG +K L K+ +I ++
Sbjct: 12 LLGKGTFGKVILVREKATGRYYAMKIL--------------RKEVIIAKDEVA------- 50
Query: 547 LHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRV 606
H ++ VL++ H + +L V EY GG L + + +R
Sbjct: 51 -HTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERA 107
Query: 607 NF-ARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
F +I + + YLHS ++++RD+ +N ++ + G
Sbjct: 108 RFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDG 142
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 64/156 (41%), Gaps = 26/156 (16%)
Query: 487 LLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINN 546
LLG+G FG+V V + TG +K L K+ +I D +H L N
Sbjct: 17 LLGKGTFGKVILVKEKATGRYYAMKIL---------------KKEVIVAKDEVAHTLTEN 61
Query: 547 LHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRV 606
VL++ H + +L V EY GG L + + R
Sbjct: 62 -------RVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGEL--FFHLSRERVFSEDRA 112
Query: 607 NF-ARDIAAGMTYLHS-MNLIHRDLNSQNCLVREVG 640
F +I + + YLHS N+++RDL +N ++ + G
Sbjct: 113 RFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDG 148
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 65/155 (41%), Gaps = 25/155 (16%)
Query: 487 LLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINN 546
LLG+G FG+V V + TG +K L K+ +I ++
Sbjct: 17 LLGKGTFGKVILVREKATGRYYAMKIL--------------RKEVIIAKDEVA------- 55
Query: 547 LHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRV 606
H ++ VL++ H + +L V EY GG L + + +R
Sbjct: 56 -HTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERA 112
Query: 607 NF-ARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
F +I + + YLHS ++++RD+ +N ++ + G
Sbjct: 113 RFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDG 147
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Query: 550 FSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFA 609
++ V++ L + ++R IG+ + + LV E G L + LQ + + +
Sbjct: 74 LAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQ-NRHVKDKNIIELV 131
Query: 610 RDIAAGMTYLHSMNLIHRDLNSQNCLV 636
++ GM YL N +HRDL ++N L+
Sbjct: 132 HQVSMGMKYLEESNFVHRDLAARNVLL 158
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Query: 550 FSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFA 609
++ V++ L + ++R IG+ + + LV E G L + LQ + + +
Sbjct: 66 LAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQ-NRHVKDKNIIELV 123
Query: 610 RDIAAGMTYLHSMNLIHRDLNSQNCLV 636
++ GM YL N +HRDL ++N L+
Sbjct: 124 HQVSMGMKYLEESNFVHRDLAARNVLL 150
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Query: 550 FSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFA 609
++ V++ L + ++R IG+ + + LV E G L + LQ + + +
Sbjct: 60 LAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQ-NRHVKDKNIIELV 117
Query: 610 RDIAAGMTYLHSMNLIHRDLNSQNCLV 636
++ GM YL N +HRDL ++N L+
Sbjct: 118 HQVSMGMKYLEESNFVHRDLAARNVLL 144
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Query: 550 FSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFA 609
++ V++ L + ++R IG+ + + LV E G L + LQ + + +
Sbjct: 60 LAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQ-NRHVKDKNIIELV 117
Query: 610 RDIAAGMTYLHSMNLIHRDLNSQNCLV 636
++ GM YL N +HRDL ++N L+
Sbjct: 118 HQVSMGMKYLEESNFVHRDLAARNVLL 144
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 74/166 (44%), Gaps = 42/166 (25%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
+G+G +G+V+ R GE + +K + +E + + +E++ IY
Sbjct: 45 IGKGRYGEVWMGKWR--GEKVAVKVFFTTEEAS---WFRETE---IY------------- 83
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDR----KLNLVTEYIAGGTLKELLQDPGQPLPWG 603
Q ++R H N++ FI K +L L+T+Y G+L + L+ L
Sbjct: 84 ----QTVLMR---HENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLK--STTLDAK 134
Query: 604 QRVNFARDIAAGMTYLHSM--------NLIHRDLNSQNCLVREVGS 641
+ A +G+ +LH+ + HRDL S+N LV++ G+
Sbjct: 135 SMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGT 180
>pdb|2D8X|A Chain A, Solution Structure Of The Second Lim Domain Of
Particularly Interesting New Cys-His Protein (Pinch)
Length = 70
Score = 37.7 bits (86), Expect = 0.024, Method: Composition-based stats.
Identities = 13/37 (35%), Positives = 21/37 (56%)
Query: 70 ACQNCGQMMSGPVMVVGDHKFHPECFKCTSCSCCIGD 106
C CG+ + G V+ ++ +HPECF+C C + D
Sbjct: 7 GCHQCGEFIIGRVIKAMNNSWHPECFRCDLCQEVLAD 43
Score = 33.9 bits (76), Expect = 0.27, Method: Composition-based stats.
Identities = 13/41 (31%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 25 VQALSQEWHTDCFRCSAC-DVMLDNWYFEKDGLLFCKEDYN 64
++A++ WH +CFRC C +V+ D + + G C+ +N
Sbjct: 20 IKAMNNSWHPECFRCDLCQEVLADIGFVKNAGRHLCRPCHN 60
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 46/104 (44%), Gaps = 9/104 (8%)
Query: 541 HGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEY-----IAGGTLKELLQD 595
LI+ + ++ +L+ L H NVI + V + +E + G L +++
Sbjct: 66 QSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVK- 124
Query: 596 PGQPLPWGQRVNF-ARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
Q L + V F + G+ Y+HS +IHRDL N V E
Sbjct: 125 -SQALS-DEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNE 166
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Query: 550 FSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFA 609
++ V++ L + ++R IG+ + + LV E G L + LQ + + +
Sbjct: 56 LAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQ-NRHVKDKNIIELV 113
Query: 610 RDIAAGMTYLHSMNLIHRDLNSQNCLV 636
++ GM YL N +HRDL ++N L+
Sbjct: 114 HQVSMGMKYLEESNFVHRDLAARNVLL 140
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Query: 550 FSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFA 609
++ V++ L + ++R IG+ + + LV E G L + LQ + + +
Sbjct: 54 LAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQ-NRHVKDKNIIELV 111
Query: 610 RDIAAGMTYLHSMNLIHRDLNSQNCLV 636
++ GM YL N +HRDL ++N L+
Sbjct: 112 HQVSMGMKYLEESNFVHRDLAARNVLL 138
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 45/94 (47%), Gaps = 17/94 (18%)
Query: 559 LHHHNVIRFIGVLYKDRKLN----LVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAA 614
+ H N+++FI + L L+T + G+L + L+ G + W + + A ++
Sbjct: 66 MKHENLLQFIAAEKRGSNLEVELWLITAFHDKGSLTDYLK--GNIITWNELCHVAETMSR 123
Query: 615 GMTYLHS-----------MNLIHRDLNSQNCLVR 637
G++YLH ++ HRD S+N L++
Sbjct: 124 GLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLK 157
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 66/160 (41%), Gaps = 39/160 (24%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
+G G +G V + +GE + +K+L R + + F K + + L+ L + +I L
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQS--EIFAKRAYRELLLLKHMQHENVIGLL 89
Query: 548 HCFSQVAVLRSLHHHNVI---------RFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQ 598
F+ + LR+ + ++ + +G+ + + K+ +Y+ LK
Sbjct: 90 DVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKI----QYLVYQMLK-------- 137
Query: 599 PLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
G+ Y+HS ++HRDL N V E
Sbjct: 138 ----------------GLKYIHSAGVVHRDLKPGNLAVNE 161
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Query: 552 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 611
++++ RSL H +V+ F G + + +V E +L EL + + L + + R
Sbjct: 65 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKR-RKALTEPEARYYLRQ 123
Query: 612 IAAGMTYLHSMNLIHRDLNSQNCLVRE 638
I G YLH +IHRDL N + E
Sbjct: 124 IVLGCQYLHRNRVIHRDLKLGNLFLNE 150
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Query: 555 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAA 614
V+ L H ++ D KL Y G L + ++ G R + +I +
Sbjct: 85 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRF-YTAEIVS 143
Query: 615 GMTYLHSMNLIHRDLNSQNCLVRE 638
+ YLH +IHRDL +N L+ E
Sbjct: 144 ALEYLHGKGIIHRDLKPENILLNE 167
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 63/156 (40%), Gaps = 31/156 (19%)
Query: 487 LLGQGFFGQVYRVTHRETGEV----MVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHG 542
LG+G F + + ++ +T EV +V K L + EK +
Sbjct: 28 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM----------------- 70
Query: 543 LINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPW 602
++++ RSL H +V+ F G + + +V E +L EL + + L
Sbjct: 71 ---------EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKR-RKALTE 120
Query: 603 GQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
+ + R I G YLH +IHRDL N + E
Sbjct: 121 PEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNE 156
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 51/119 (42%), Gaps = 27/119 (22%)
Query: 478 RASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKEL-YRVDEEAEKNFLKESKQGLIYLI 536
RA D +G G +G+ ++ + G+++V KEL Y EAEK L
Sbjct: 4 RAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQML----------- 52
Query: 537 DLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYK--DRKLNLVTEYIAGGTLKELL 593
S+V +LR L H N++R+ + + L +V EY GG L ++
Sbjct: 53 -------------VSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVI 98
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 75/186 (40%), Gaps = 39/186 (20%)
Query: 470 EASKSRIFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESK 529
+ASK F L G LG+G FGQV EA+ + ++
Sbjct: 20 DASKWE-FPRDRLKLGKPLGRGAFGQVI---------------------EADAFGIDKTA 57
Query: 530 QGLIYLIDLGSHGLINNLH--CFSQVAVLRSLHHH-NVIRFIGVLYK-DRKLNLVTEYIA 585
+ + G ++ H S++ +L + HH NV+ +G K L ++ E+
Sbjct: 58 TXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCK 117
Query: 586 GGTLKELLQD------PGQP-------LPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQ 632
G L L+ P +P L + ++ +A GM +L S IHRDL ++
Sbjct: 118 FGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAAR 177
Query: 633 NCLVRE 638
N L+ E
Sbjct: 178 NILLSE 183
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 51/119 (42%), Gaps = 27/119 (22%)
Query: 478 RASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKEL-YRVDEEAEKNFLKESKQGLIYLI 536
RA D +G G +G+ ++ + G+++V KEL Y EAEK L
Sbjct: 4 RAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQML----------- 52
Query: 537 DLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYK--DRKLNLVTEYIAGGTLKELL 593
S+V +LR L H N++R+ + + L +V EY GG L ++
Sbjct: 53 -------------VSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVI 98
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 37.4 bits (85), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 63/156 (40%), Gaps = 31/156 (19%)
Query: 487 LLGQGFFGQVYRVTHRETGEV----MVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHG 542
LG+G F + + ++ +T EV +V K L + EK +
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM----------------- 90
Query: 543 LINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPW 602
++++ RSL H +V+ F G + + +V E +L EL + + L
Sbjct: 91 ---------EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKR-RKALTE 140
Query: 603 GQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
+ + R I G YLH +IHRDL N + E
Sbjct: 141 PEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNE 176
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 37.4 bits (85), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 63/156 (40%), Gaps = 31/156 (19%)
Query: 487 LLGQGFFGQVYRVTHRETGEV----MVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHG 542
LG+G F + + ++ +T EV +V K L + EK +
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM----------------- 66
Query: 543 LINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPW 602
++++ RSL H +V+ F G + + +V E +L EL + + L
Sbjct: 67 ---------EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKR-RKALTE 116
Query: 603 GQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
+ + R I G YLH +IHRDL N + E
Sbjct: 117 PEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNE 152
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Query: 555 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAA 614
V+ L H ++ D KL Y G L + ++ G R + +I +
Sbjct: 90 VMSRLDHPFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVS 148
Query: 615 GMTYLHSMNLIHRDLNSQNCLVRE 638
+ YLH +IHRDL +N L+ E
Sbjct: 149 ALEYLHGKGIIHRDLKPENILLNE 172
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 63/156 (40%), Gaps = 31/156 (19%)
Query: 487 LLGQGFFGQVYRVTHRETGEV----MVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHG 542
LG+G F + + ++ +T EV +V K L + EK +
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM----------------- 88
Query: 543 LINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPW 602
++++ RSL H +V+ F G + + +V E +L EL + + L
Sbjct: 89 ---------EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKR-RKALTE 138
Query: 603 GQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
+ + R I G YLH +IHRDL N + E
Sbjct: 139 PEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNE 174
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 63/156 (40%), Gaps = 31/156 (19%)
Query: 487 LLGQGFFGQVYRVTHRETGEV----MVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHG 542
LG+G F + + ++ +T EV +V K L + EK +
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM----------------- 66
Query: 543 LINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPW 602
++++ RSL H +V+ F G + + +V E +L EL + + L
Sbjct: 67 ---------EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKR-RKALTE 116
Query: 603 GQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
+ + R I G YLH +IHRDL N + E
Sbjct: 117 PEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNE 152
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 6/90 (6%)
Query: 555 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTL-KELLQDPGQPLPWGQRVNFA-RDI 612
+LR H N+I V + + LVTE + GG L ++L+ Q + +F I
Sbjct: 74 LLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILR---QKFFSEREASFVLHTI 130
Query: 613 AAGMTYLHSMNLIHRDLNSQNCL-VREVGS 641
+ YLHS ++HRDL N L V E G+
Sbjct: 131 GKTVEYLHSQGVVHRDLKPSNILYVDESGN 160
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Query: 550 FSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFA 609
++ V++ L + ++R IG+ + + LV E G L + LQ + + +
Sbjct: 418 LAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQ-NRHVKDKNIIELV 475
Query: 610 RDIAAGMTYLHSMNLIHRDLNSQNCLV 636
++ GM YL N +HRDL ++N L+
Sbjct: 476 HQVSMGMKYLEESNFVHRDLAARNVLL 502
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 51/119 (42%), Gaps = 27/119 (22%)
Query: 478 RASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKEL-YRVDEEAEKNFLKESKQGLIYLI 536
RA D +G G +G+ ++ + G+++V KEL Y EAEK L
Sbjct: 4 RAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQML----------- 52
Query: 537 DLGSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYK--DRKLNLVTEYIAGGTLKELL 593
S+V +LR L H N++R+ + + L +V EY GG L ++
Sbjct: 53 -------------VSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVI 98
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Query: 550 FSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFA 609
++ V++ L + ++R IG+ + + LV E G L + LQ + + +
Sbjct: 419 LAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQ-NRHVKDKNIIELV 476
Query: 610 RDIAAGMTYLHSMNLIHRDLNSQNCLV 636
++ GM YL N +HRDL ++N L+
Sbjct: 477 HQVSMGMKYLEESNFVHRDLAARNVLL 503
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 76/174 (43%), Gaps = 42/174 (24%)
Query: 479 ASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDL 538
A D+ +G+G +G+V+R + + GE + +K DE K++ +E++
Sbjct: 7 ARDITLLECVGKGRYGEVWRGSWQ--GENVAVKIFSSRDE---KSWFRETE--------- 52
Query: 539 GSHGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDR----KLNLVTEYIAGGTLKELLQ 594
L N + L H N++ FI R +L L+T Y G+L + LQ
Sbjct: 53 ----LYNTVM----------LRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQ 98
Query: 595 DPGQPLPWGQRVNFARDIAAGMTYLH--------SMNLIHRDLNSQNCLVREVG 640
R+ + IA+G+ +LH + HRDL S+N LV++ G
Sbjct: 99 LTTLDTVSCLRIVLS--IASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNG 150
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 31/153 (20%), Positives = 63/153 (41%), Gaps = 23/153 (15%)
Query: 487 LLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINN 546
++G+G F V R +RETG+ +K ++ + S ++
Sbjct: 33 VIGKGPFSVVRRCINRETGQQFAVK--------------------IVDVAKFTSSPGLST 72
Query: 547 LHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTL-KELLQDPGQPLPWGQR 605
+ ++ L H +++ + D L +V E++ G L E+++ + +
Sbjct: 73 EDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEA 132
Query: 606 V--NFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
V ++ R I + Y H N+IHRD+ L+
Sbjct: 133 VASHYMRQILEALRYCHDNNIIHRDVKPHCVLL 165
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 6/90 (6%)
Query: 555 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTL-KELLQDPGQPLPWGQRVNFA-RDI 612
+LR H N+I V + + LVTE + GG L ++L+ Q + +F I
Sbjct: 74 LLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILR---QKFFSEREASFVLHTI 130
Query: 613 AAGMTYLHSMNLIHRDLNSQNCL-VREVGS 641
+ YLHS ++HRDL N L V E G+
Sbjct: 131 GKTVEYLHSQGVVHRDLKPSNILYVDESGN 160
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 31/153 (20%), Positives = 63/153 (41%), Gaps = 23/153 (15%)
Query: 487 LLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINN 546
++G+G F V R +RETG+ +K ++ + S ++
Sbjct: 31 VIGKGPFSVVRRCINRETGQQFAVK--------------------IVDVAKFTSSPGLST 70
Query: 547 LHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTL-KELLQDPGQPLPWGQR 605
+ ++ L H +++ + D L +V E++ G L E+++ + +
Sbjct: 71 EDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEA 130
Query: 606 V--NFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
V ++ R I + Y H N+IHRD+ L+
Sbjct: 131 VASHYMRQILEALRYCHDNNIIHRDVKPHCVLL 163
>pdb|1X63|A Chain A, Solution Structure Of The Second Lim Domain Of Skeletal
Muscle Lim Protein 1
Length = 82
Score = 37.0 bits (84), Expect = 0.041, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Query: 12 CAGCLNNIVE-DEYVQALSQEWHTDCFRCSAC-DVMLDNWYFEKDGLLFCKEDYNGKYG 68
C GC IV D+ V+ WH DCF CS C V+ +F K +C + K+
Sbjct: 18 CKGCFKAIVAGDQNVEYKGTVWHKDCFTCSNCKQVIGTGSFFPKGEDFYCVTCHETKFA 76
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 36.6 bits (83), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 60/152 (39%), Gaps = 26/152 (17%)
Query: 487 LLGQGFFGQVYRVTHRETGEVMVLKEL--YRVDEEAEKNFLKESKQGLIYLIDLGSHGLI 544
++G+G FG+V V + T + +K L + + + AE +E + L+ G I
Sbjct: 81 VIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVN----GDCQWI 136
Query: 545 NNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQ 604
LH Q + L LV +Y GG L LL LP
Sbjct: 137 TALHYAFQ--------------------DENHLYLVMDYYVGGDLLTLLSKFEDKLPEDM 176
Query: 605 RVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
+ ++ + +H ++ +HRD+ N L+
Sbjct: 177 ARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLL 208
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 46/103 (44%), Gaps = 9/103 (8%)
Query: 542 GLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQD 595
+I+ + ++ +L+ + H NVI + V L LVT ++ G L +++
Sbjct: 90 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPATSLEEFNDVYLVT-HLMGADLNNIVK- 147
Query: 596 PGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
Q L I G+ Y+HS ++IHRDL N V E
Sbjct: 148 -CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 189
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 36.6 bits (83), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 73/165 (44%), Gaps = 42/165 (25%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
+G+G +G+V+R + + GE + +K DE K++ +E++ L N +
Sbjct: 45 VGKGRYGEVWRGSWQ--GENVAVKIFSSRDE---KSWFRETE-------------LYNTV 86
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDR----KLNLVTEYIAGGTLKELLQDPGQPLPWG 603
L H N++ FI R +L L+T Y G+L + LQ
Sbjct: 87 M----------LRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSC 136
Query: 604 QRVNFARDIAAGMTYLH--------SMNLIHRDLNSQNCLVREVG 640
R+ + IA+G+ +LH + HRDL S+N LV++ G
Sbjct: 137 LRIVLS--IASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNG 179
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 36.6 bits (83), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 62/158 (39%), Gaps = 34/158 (21%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
+G G +G V +TG + +K+L R +I+
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSR-----------------------PFQSIIHAK 62
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQDPGQPLP 601
+ ++ +L+ + H NVI + V R L LVT ++ G L +++
Sbjct: 63 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCAKLT-- 119
Query: 602 WGQRVNF-ARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
V F I G+ Y+HS ++IHRDL N V E
Sbjct: 120 -DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 156
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 36.2 bits (82), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 42/90 (46%), Gaps = 3/90 (3%)
Query: 555 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQR---VNFARD 611
+L +H ++ L LV + GG ++ + + + P Q + +
Sbjct: 238 ILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQ 297
Query: 612 IAAGMTYLHSMNLIHRDLNSQNCLVREVGS 641
I +G+ +LH N+I+RDL +N L+ + G+
Sbjct: 298 IVSGLEHLHQRNIIYRDLKPENVLLDDDGN 327
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 36.2 bits (82), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 62/152 (40%), Gaps = 26/152 (17%)
Query: 487 LLGQGFFGQVYRVTHRETGEVMVLKELYRVD--EEAEKNFLKESKQGLIYLIDLGSHGLI 544
++G+G FG+V V + T + +K L + + + AE +E + L+
Sbjct: 97 VIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLV----------- 145
Query: 545 NNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQ 604
N C + +LH+ + L LV +Y GG L LL LP
Sbjct: 146 -NGDC----QWITALHY--------AFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDM 192
Query: 605 RVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
+ ++ + +H ++ +HRD+ N L+
Sbjct: 193 ARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLL 224
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 36.2 bits (82), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 22/101 (21%), Positives = 44/101 (43%), Gaps = 17/101 (16%)
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 607
+ F ++ +++ L H ++ + + +V + + GG L+ LQ Q V+
Sbjct: 61 NVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQ---------QNVH 111
Query: 608 FARD--------IAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
F + + + YL + +IHRD+ N L+ E G
Sbjct: 112 FKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHG 152
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 36.2 bits (82), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 73/165 (44%), Gaps = 42/165 (25%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
+G+G +G+V+R + + GE + +K DE K++ +E++ L N +
Sbjct: 16 VGKGRYGEVWRGSWQ--GENVAVKIFSSRDE---KSWFRETE-------------LYNTV 57
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDR----KLNLVTEYIAGGTLKELLQDPGQPLPWG 603
L H N++ FI R +L L+T Y G+L + LQ
Sbjct: 58 ----------MLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSC 107
Query: 604 QRVNFARDIAAGMTYLH--------SMNLIHRDLNSQNCLVREVG 640
R+ + IA+G+ +LH + HRDL S+N LV++ G
Sbjct: 108 LRIVLS--IASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNG 150
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 36.2 bits (82), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 42/90 (46%), Gaps = 3/90 (3%)
Query: 555 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQR---VNFARD 611
+L +H ++ L LV + GG ++ + + + P Q + +
Sbjct: 238 ILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQ 297
Query: 612 IAAGMTYLHSMNLIHRDLNSQNCLVREVGS 641
I +G+ +LH N+I+RDL +N L+ + G+
Sbjct: 298 IVSGLEHLHQRNIIYRDLKPENVLLDDDGN 327
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 36.2 bits (82), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 46/104 (44%), Gaps = 9/104 (8%)
Query: 541 HGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEY-----IAGGTLKELLQD 595
LI+ + ++ +L+ L H NVI + V + +E + G L +++
Sbjct: 58 QSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVK- 116
Query: 596 PGQPLPWGQRVNF-ARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
Q L + V F + G+ Y+HS +IHRDL N V E
Sbjct: 117 -CQALS-DEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNE 158
>pdb|1A7I|A Chain A, Amino-Terminal Lim Domain From Quail Cysteine And
Glycine- Rich Protein, Nmr, Minimized Average Structure
Length = 81
Score = 36.2 bits (82), Expect = 0.066, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 1/66 (1%)
Query: 12 CAGCLNNIVEDEYVQALSQEWHTDCFRCSACDVMLDNWYFE-KDGLLFCKEDYNGKYGEA 70
C C + E VQ + +H CF C C LD+ D ++CK Y KYG
Sbjct: 10 CGACGRTVYHAEEVQCDGRSFHRCCFLCMVCRKNLDSTTVAIHDAEVYCKSCYGKKYGPK 69
Query: 71 CQNCGQ 76
GQ
Sbjct: 70 GYGYGQ 75
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 36.2 bits (82), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 65/157 (41%), Gaps = 30/157 (19%)
Query: 487 LLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINN 546
L+G+G +G VY + + + +K++ R+ E+ LI+
Sbjct: 35 LIGRGSYGYVYLAYDKNANKNVAIKKVNRMFED-----------------------LIDC 71
Query: 547 LHCFSQVAVLRSLHHHNVIRFIGV-----LYKDRKLNLVTEYIAGGTLKELLQDPGQPLP 601
++ +L L +IR + L K +L +V E IA LK+L + P L
Sbjct: 72 KRILREITILNRLKSDYIIRLHDLIIPEDLLKFDELYIVLE-IADSDLKKLFKTPIF-LT 129
Query: 602 WGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
++ G ++H +IHRDL NCL+ +
Sbjct: 130 EQHVKTILYNLLLGEKFIHESGIIHRDLKPANCLLNQ 166
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 36.2 bits (82), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 42/90 (46%), Gaps = 3/90 (3%)
Query: 555 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQR---VNFARD 611
+L +H ++ L LV + GG ++ + + + P Q + +
Sbjct: 238 ILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQ 297
Query: 612 IAAGMTYLHSMNLIHRDLNSQNCLVREVGS 641
I +G+ +LH N+I+RDL +N L+ + G+
Sbjct: 298 IVSGLEHLHQRNIIYRDLKPENVLLDDDGN 327
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 35.8 bits (81), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 63/167 (37%), Gaps = 28/167 (16%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LG+G F V R H+ TG K + + + ++F K ++ I
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAK-IINTKKLSARDFQKLEREARI-------------- 58
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD--PGQPLPWGQR 605
R L H N++R + ++ LV + + GG EL +D +
Sbjct: 59 --------CRKLQHPNIVRLHDSIQEESFHYLVFDLVTGG---ELFEDIVAREFYSEADA 107
Query: 606 VNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGSGFDFHLGQIYL 652
+ + I + Y HS ++HR+L +N L+ G L L
Sbjct: 108 SHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGL 154
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 35.8 bits (81), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 42/90 (46%), Gaps = 3/90 (3%)
Query: 555 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQR---VNFARD 611
+L +H ++ L LV + GG ++ + + + P Q + +
Sbjct: 238 ILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQ 297
Query: 612 IAAGMTYLHSMNLIHRDLNSQNCLVREVGS 641
I +G+ +LH N+I+RDL +N L+ + G+
Sbjct: 298 IVSGLEHLHQRNIIYRDLKPENVLLDDDGN 327
>pdb|1X64|A Chain A, Solution Structure Of The Lim Domain Of Alpha-Actinin-2
Associated Lim Protein
Length = 89
Score = 35.8 bits (81), Expect = 0.075, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Query: 71 CQNCGQMMSGPVMVVGDHKFHPECFKCTSCSCCIGDGESYALVERSILYC 120
C CG + G V+ D HPECF C C+ + + Y VE LYC
Sbjct: 28 CDKCGSGIVGAVVKARDKYRHPECFVCADCNLNLKQ-KGYFFVEGE-LYC 75
Score = 29.3 bits (64), Expect = 8.5, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Query: 12 CAGCLNNIVEDEYVQALSQEWHTDCFRCSACDVML-DNWYFEKDGLLFCK 60
C C + IV V+A + H +CF C+ C++ L YF +G L+C+
Sbjct: 28 CDKCGSGIV-GAVVKARDKYRHPECFVCADCNLNLKQKGYFFVEGELYCE 76
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 35.8 bits (81), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 63/167 (37%), Gaps = 28/167 (16%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LG+G F V R H+ TG K + + + ++F K ++ I
Sbjct: 13 LGKGAFSVVRRCVHKTTGLEFAAK-IINTKKLSARDFQKLEREARI-------------- 57
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD--PGQPLPWGQR 605
R L H N++R + ++ LV + + GG EL +D +
Sbjct: 58 --------CRKLQHPNIVRLHDSIQEESFHYLVFDLVTGG---ELFEDIVAREFYSEADA 106
Query: 606 VNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGSGFDFHLGQIYL 652
+ + I + Y HS ++HR+L +N L+ G L L
Sbjct: 107 SHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGL 153
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 35.8 bits (81), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 71/155 (45%), Gaps = 23/155 (14%)
Query: 487 LLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINN 546
+LGQG FG+V+ V + ++LY +K K+ + + D
Sbjct: 31 VLGQGSFGKVFLVKKISGSDA---RQLYA---------MKVLKKATLKVRD--------R 70
Query: 547 LHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRV 606
+ + +L ++H +++ + KL L+ +++ GG L L + + + V
Sbjct: 71 VRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSK--EVMFTEEDV 128
Query: 607 NF-ARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
F ++A + +LHS+ +I+RDL +N L+ E G
Sbjct: 129 KFYLAELALALDHLHSLGIIYRDLKPENILLDEEG 163
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 35.8 bits (81), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 46/104 (44%), Gaps = 9/104 (8%)
Query: 541 HGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEY-----IAGGTLKELLQD 595
LI+ + ++ +L+ L H NVI + V + +E + G L +++
Sbjct: 66 QSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVK- 124
Query: 596 PGQPLPWGQRVNF-ARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
Q L + V F + G+ Y+HS +IHRDL N V E
Sbjct: 125 -CQALS-DEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNE 166
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 35.8 bits (81), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 72/169 (42%), Gaps = 32/169 (18%)
Query: 485 GPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLI 544
G +G G FG++Y T+ +T E + +K L V + L ESK IY I G G+
Sbjct: 12 GRKIGSGSFGEIYLGTNIQTNEEVAIK-LENV-KTKHPQLLYESK---IYRILQGGTGIP 66
Query: 545 NNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQ 604
N +R+ GV + N++ + G +L++L + L
Sbjct: 67 N-------------------VRWFGV---EGDYNVLVMDLLGPSLEDLFNFCSRKLSLKT 104
Query: 605 RVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGSGFDFHLGQIYLI 653
+ A + + ++HS + +HRD+ N L+ G Q+Y+I
Sbjct: 105 VLMLADQMINRVEFVHSKSFLHRDIKPDNFLM-----GLGRRANQVYII 148
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 35.8 bits (81), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
Query: 550 FSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQP-LPWGQRVNF 608
++ +L ++ V+ L LV + GG LK + GQ P + V +
Sbjct: 232 LNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFY 291
Query: 609 ARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
A +I G+ LH +++RDL +N L+ + G
Sbjct: 292 AAEICCGLEDLHRERIVYRDLKPENILLDDHG 323
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 35.4 bits (80), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 61/157 (38%), Gaps = 28/157 (17%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LG+G F V R H+ TG K + + + ++F K ++ I
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAK-IINTKKLSARDFQKLEREARI-------------- 58
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD--PGQPLPWGQR 605
R L H N++R + ++ LV + + GG EL +D +
Sbjct: 59 --------CRKLQHPNIVRLHDSIQEESFHYLVFDLVTGG---ELFEDIVAREFYSEADA 107
Query: 606 VNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGSG 642
+ + I + Y HS ++HR+L +N L+ G
Sbjct: 108 SHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKG 144
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 71/155 (45%), Gaps = 23/155 (14%)
Query: 487 LLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINN 546
+LGQG FG+V+ V + ++LY +K K+ + + D
Sbjct: 32 VLGQGSFGKVFLVKKISGSDA---RQLYA---------MKVLKKATLKVRD--------R 71
Query: 547 LHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRV 606
+ + +L ++H +++ + KL L+ +++ GG L L + + + V
Sbjct: 72 VRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSK--EVMFTEEDV 129
Query: 607 NF-ARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
F ++A + +LHS+ +I+RDL +N L+ E G
Sbjct: 130 KFYLAELALALDHLHSLGIIYRDLKPENILLDEEG 164
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 71/155 (45%), Gaps = 23/155 (14%)
Query: 487 LLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINN 546
+LGQG FG+V+ V + ++LY +K K+ + + D
Sbjct: 31 VLGQGSFGKVFLVKKISGSDA---RQLYA---------MKVLKKATLKVRD--------R 70
Query: 547 LHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRV 606
+ + +L ++H +++ + KL L+ +++ GG L L + + + V
Sbjct: 71 VRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSK--EVMFTEEDV 128
Query: 607 NF-ARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
F ++A + +LHS+ +I+RDL +N L+ E G
Sbjct: 129 KFYLAELALALDHLHSLGIIYRDLKPENILLDEEG 163
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Query: 549 CFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQP-LPWGQRVN 607
++ +L ++ V+ L LV + GG LK + GQ P + V
Sbjct: 231 ALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVF 290
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
+A +I G+ LH +++RDL +N L+ + G
Sbjct: 291 YAAEICCGLEDLHRERIVYRDLKPENILLDDHG 323
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 64/167 (38%), Gaps = 28/167 (16%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
LG+G F V R H+ TG K + + + ++F K ++ I
Sbjct: 37 LGKGAFSVVRRCVHKTTGLEFAAK-IINTKKLSARDFQKLEREARI-------------- 81
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD--PGQPLPWGQR 605
C R L H N++R + ++ LV + + GG EL +D +
Sbjct: 82 -C-------RKLQHPNIVRLHDSIQEESFHYLVFDLVTGG---ELFEDIVAREFYSEADA 130
Query: 606 VNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGSGFDFHLGQIYL 652
+ + I + Y HS ++HR+L +N L+ G L L
Sbjct: 131 SHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGL 177
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 8/90 (8%)
Query: 552 QVAVLRSLHHHNVIRFIGVLY-----KDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRV 606
++ +L H N+I ++ + + + LVT ++ G L +LL+ Q L
Sbjct: 91 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYLVT-HLMGADLYKLLK--TQHLSNDHIC 147
Query: 607 NFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
F I G+ Y+HS N++HRDL N L+
Sbjct: 148 YFLYQILRGLKYIHSANVLHRDLKPSNLLL 177
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 65/155 (41%), Gaps = 27/155 (17%)
Query: 488 LGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINNL 547
+G G GQV+++ R+TG V+ +K++ R + E + L+DL
Sbjct: 33 MGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRI---------LMDLD-------- 75
Query: 548 HCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQ-PLPWGQRV 606
VL+S +++ G + + + E + GT E L+ Q P+P
Sbjct: 76 ------VVLKSHDCPYIVQCFGTFITNTDVFIAMELM--GTCAEKLKKRMQGPIPERILG 127
Query: 607 NFARDIAAGMTYLHSMN-LIHRDLNSQNCLVREVG 640
I + YL + +IHRD+ N L+ E G
Sbjct: 128 KMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERG 162
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 68/154 (44%), Gaps = 20/154 (12%)
Query: 487 LLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINN 546
++G+G FG+VY +TG++ +K L +K +K + + L + L++
Sbjct: 196 IIGRGGFGEVYGCRKADTGKMYAMKCL-------DKKRIKMKQGETLALNERIMLSLVST 248
Query: 547 LHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRV 606
C V + + H + KL+ + + + GG L L G R
Sbjct: 249 GDCPFIVCMSYAFHTPD------------KLSFILDLMNGGDLHYHLSQHGVFSEADMRF 296
Query: 607 NFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
+A +I G+ ++H+ +++RDL N L+ E G
Sbjct: 297 -YAAEIILGLEHMHNRFVVYRDLKPANILLDEHG 329
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 68/154 (44%), Gaps = 20/154 (12%)
Query: 487 LLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINN 546
++G+G FG+VY +TG++ +K L +K +K + + L + L++
Sbjct: 196 IIGRGGFGEVYGCRKADTGKMYAMKCL-------DKKRIKMKQGETLALNERIMLSLVST 248
Query: 547 LHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRV 606
C V + + H + KL+ + + + GG L L G R
Sbjct: 249 GDCPFIVCMSYAFHTPD------------KLSFILDLMNGGDLHYHLSQHGVFSEADMRF 296
Query: 607 NFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
+A +I G+ ++H+ +++RDL N L+ E G
Sbjct: 297 -YAAEIILGLEHMHNRFVVYRDLKPANILLDEHG 329
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/78 (23%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Query: 561 HHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLH 620
H N+++ V + LV E + GG L E ++ + R + + ++++H
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKH-FSETEASYIMRKLVSAVSHMH 123
Query: 621 SMNLIHRDLNSQNCLVRE 638
+ ++HRDL +N L +
Sbjct: 124 DVGVVHRDLKPENLLFTD 141
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 64/158 (40%), Gaps = 30/158 (18%)
Query: 487 LLGQGFFGQVYRVTHRETGEVMVLKELYR----VDEEAEKNFLKESKQGLIYLIDLGSHG 542
+LG+G FG+V +ETG++ +K L + D++ E ++ L +H
Sbjct: 30 VLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLAR-----NHP 84
Query: 543 LINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPW 602
+ L C Q +L V E++ GG L +Q +
Sbjct: 85 FLTQLFCCFQTP--------------------DRLFFVMEFVNGGDLMFHIQK-SRRFDE 123
Query: 603 GQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
+ +A +I + + +LH +I+RDL N L+ G
Sbjct: 124 ARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEG 161
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 60/158 (37%), Gaps = 38/158 (24%)
Query: 487 LLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINN 546
++G G FG V++ E+ EV + K L +K F Q
Sbjct: 47 VIGNGSFGVVFQAKLVESDEVAIKKVL------QDKRFKNRELQ---------------- 84
Query: 547 LHCFSQVAVLRSLHHHNVIRFIGVLYK--DRK----LNLVTEYIAGGTLK--ELLQDPGQ 598
++R + H NV+ Y D+K LNLV EY+ + Q
Sbjct: 85 --------IMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQ 136
Query: 599 PLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
+P + + + Y+HS+ + HRD+ QN L+
Sbjct: 137 TMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLL 174
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 75/188 (39%), Gaps = 41/188 (21%)
Query: 470 EASKSRIFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESK 529
+ASK F L G LG+G FGQV EA+ + ++
Sbjct: 9 DASKWE-FPRDRLKLGKPLGRGAFGQVI---------------------EADAFGIDKTA 46
Query: 530 QGLIYLIDLGSHGLINNLH--CFSQVAVLRSLHHH-NVIRFIGVLYK-DRKLNLVTEYIA 585
+ + G ++ H S++ +L + HH NV+ +G K L ++TE+
Sbjct: 47 TCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCK 106
Query: 586 GGTLKELLQD------PGQPLPWGQRVNF---------ARDIAAGMTYLHSMNLIHRDLN 630
G L L+ P + P +F + +A GM +L S IHRDL
Sbjct: 107 FGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLA 166
Query: 631 SQNCLVRE 638
++N L+ E
Sbjct: 167 ARNILLSE 174
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 68/154 (44%), Gaps = 20/154 (12%)
Query: 487 LLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINN 546
++G+G FG+VY +TG++ +K L +K +K + + L + L++
Sbjct: 195 IIGRGGFGEVYGCRKADTGKMYAMKCL-------DKKRIKMKQGETLALNERIMLSLVST 247
Query: 547 LHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRV 606
C V + + H + KL+ + + + GG L L G R
Sbjct: 248 GDCPFIVCMSYAFHTPD------------KLSFILDLMNGGDLHYHLSQHGVFSEADMRF 295
Query: 607 NFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
+A +I G+ ++H+ +++RDL N L+ E G
Sbjct: 296 -YAAEIILGLEHMHNRFVVYRDLKPANILLDEHG 328
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 68/154 (44%), Gaps = 20/154 (12%)
Query: 487 LLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINN 546
++G+G FG+VY +TG++ +K L +K +K + + L + L++
Sbjct: 196 IIGRGGFGEVYGCRKADTGKMYAMKCL-------DKKRIKMKQGETLALNERIMLSLVST 248
Query: 547 LHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRV 606
C V + + H + KL+ + + + GG L L G R
Sbjct: 249 GDCPFIVCMSYAFHTPD------------KLSFILDLMNGGDLHYHLSQHGVFSEADMRF 296
Query: 607 NFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
+A +I G+ ++H+ +++RDL N L+ E G
Sbjct: 297 -YAAEIILGLEHMHNRFVVYRDLKPANILLDEHG 329
>pdb|1N7E|A Chain A, Crystal Structure Of The Sixth Pdz Domain Of Grip1
pdb|1N7F|A Chain A, Crystal Structure Of The Sixth Pdz Domain Of Grip1 In
Complex With Liprin C-Terminal Peptide
pdb|1N7F|B Chain B, Crystal Structure Of The Sixth Pdz Domain Of Grip1 In
Complex With Liprin C-Terminal Peptide
Length = 97
Score = 35.0 bits (79), Expect = 0.15, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 24/35 (68%)
Query: 292 SLHLGDRILEVNGTPVRDKPLQEVECLIRNTTDTV 326
++H+GDRIL +N + ++ KPL E L++ +TV
Sbjct: 48 AIHIGDRILAINSSSLKGKPLSEAIHLLQMAGETV 82
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/84 (20%), Positives = 40/84 (47%)
Query: 552 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 611
++++L H N++ +L ++ E+I+G + E + L + V++
Sbjct: 51 EISILNIARHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQ 110
Query: 612 IAAGMTYLHSMNLIHRDLNSQNCL 635
+ + +LHS N+ H D+ +N +
Sbjct: 111 VCEALQFLHSHNIGHFDIRPENII 134
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 75/188 (39%), Gaps = 41/188 (21%)
Query: 470 EASKSRIFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESK 529
+ASK F L G LG+G FGQV EA+ + ++
Sbjct: 9 DASKWE-FPRDRLKLGKPLGRGAFGQVI---------------------EADAFGIDKTA 46
Query: 530 QGLIYLIDLGSHGLINNLH--CFSQVAVLRSLHHH-NVIRFIGVLYK-DRKLNLVTEYIA 585
+ + G ++ H S++ +L + HH NV+ +G K L ++TE+
Sbjct: 47 TCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCK 106
Query: 586 GGTLKELLQD------PGQPLPWGQRVNF---------ARDIAAGMTYLHSMNLIHRDLN 630
G L L+ P + P +F + +A GM +L S IHRDL
Sbjct: 107 FGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLA 166
Query: 631 SQNCLVRE 638
++N L+ E
Sbjct: 167 ARNILLSE 174
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Query: 556 LRSLHHHNVIRFIGVLYKDRKLN--LVTEYIAGGTLKELLQDPGQ-PLPWGQRVNFARDI 612
LR H NV+ +G + L+T ++ G+L +L + + Q V FA D+
Sbjct: 61 LRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDM 120
Query: 613 AAGMTYLHSMN-LIHRD-LNSQNCLVRE 638
A GM +LH++ LI R LNS++ ++ E
Sbjct: 121 ARGMAFLHTLEPLIPRHALNSRSVMIDE 148
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 75/184 (40%), Gaps = 37/184 (20%)
Query: 470 EASKSRIFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESK 529
+ASK F L G LG+G FGQV EA+ + ++
Sbjct: 18 DASKWE-FPRDRLNLGKPLGRGAFGQVI---------------------EADAFGIDKTA 55
Query: 530 QGLIYLIDLGSHGLINNLH--CFSQVAVLRSLHHH-NVIRFIGVLYK-DRKLNLVTEYIA 585
+ + G ++ H S++ +L + HH NV+ +G K L ++ E+
Sbjct: 56 TXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCK 115
Query: 586 GGTLKELLQDP-GQPLPWG----------QRVNFARDIAAGMTYLHSMNLIHRDLNSQNC 634
G L L+ + +P+ + ++ +A GM +L S IHRDL ++N
Sbjct: 116 FGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNI 175
Query: 635 LVRE 638
L+ E
Sbjct: 176 LLSE 179
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 75/188 (39%), Gaps = 41/188 (21%)
Query: 470 EASKSRIFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESK 529
+ASK F L G LG+G FGQV EA+ + ++
Sbjct: 9 DASKWE-FPRDRLKLGKPLGRGAFGQVI---------------------EADAFGIDKTA 46
Query: 530 QGLIYLIDLGSHGLINNLH--CFSQVAVLRSLHHH-NVIRFIGVLYK-DRKLNLVTEYIA 585
+ + G ++ H S++ +L + HH NV+ +G K L ++TE+
Sbjct: 47 TCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCK 106
Query: 586 GGTLKELLQD------PGQPLPWGQRVNF---------ARDIAAGMTYLHSMNLIHRDLN 630
G L L+ P + P +F + +A GM +L S IHRDL
Sbjct: 107 FGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLA 166
Query: 631 SQNCLVRE 638
++N L+ E
Sbjct: 167 ARNILLSE 174
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 75/187 (40%), Gaps = 40/187 (21%)
Query: 470 EASKSRIFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESK 529
+ASK F L G LG+G FGQV EA+ + ++
Sbjct: 19 DASKWE-FPRDRLNLGKPLGRGAFGQVI---------------------EADAFGIDKTA 56
Query: 530 QGLIYLIDLGSHGLINNLH--CFSQVAVLRSLHHH-NVIRFIGVLYK-DRKLNLVTEYIA 585
+ + G ++ H S++ +L + HH NV+ +G K L ++ E+
Sbjct: 57 TCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCK 116
Query: 586 GGTLKELLQDP-GQPLPWGQRVNFARD-------------IAAGMTYLHSMNLIHRDLNS 631
G L L+ + +P+ + +D +A GM +L S IHRDL +
Sbjct: 117 FGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAA 176
Query: 632 QNCLVRE 638
+N L+ E
Sbjct: 177 RNILLSE 183
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 579 LVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
+V EY+ G TL++++ G P+ + + D + + H +IHRD+ N L+
Sbjct: 93 IVMEYVDGVTLRDIVHTEG-PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANILI 149
>pdb|1V5Q|A Chain A, Solution Structure Of The Pdz Domain From Mouse Glutamate
Receptor Interacting Protein 1a-L (Grip1) Homolog
Length = 122
Score = 34.7 bits (78), Expect = 0.20, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 21/33 (63%)
Query: 293 LHLGDRILEVNGTPVRDKPLQEVECLIRNTTDT 325
L +GDR++ +NG P D +E L+R+++ T
Sbjct: 64 LQIGDRVMAINGIPTEDSTFEEANQLLRDSSIT 96
>pdb|1P1D|A Chain A, Structural Insights Into The Inter-Domain Chaperoning Of
Tandem Pdz Domains In Glutamate Receptor Interacting
Proteins
Length = 196
Score = 34.7 bits (78), Expect = 0.20, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 21/33 (63%)
Query: 293 LHLGDRILEVNGTPVRDKPLQEVECLIRNTTDT 325
L +GDR++ +NG P D +E L+R+++ T
Sbjct: 55 LQIGDRVMAINGIPTEDSTFEEANQLLRDSSIT 87
>pdb|1P1E|A Chain A, Structural Insights Into The Inter-Domain Chaperoning Of
Tandem Pdz Domains In Glutamate Receptor Interacting
Proteins
Length = 101
Score = 34.7 bits (78), Expect = 0.20, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 21/33 (63%)
Query: 293 LHLGDRILEVNGTPVRDKPLQEVECLIRNTTDT 325
L +GDR++ +NG P D +E L+R+++ T
Sbjct: 55 LQIGDRVMAINGIPTEDSTFEEANQLLRDSSIT 87
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 75/184 (40%), Gaps = 37/184 (20%)
Query: 470 EASKSRIFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESK 529
+ASK F L G LG+G FGQV EA+ + ++
Sbjct: 18 DASKWE-FPRDRLNLGKPLGRGAFGQVI---------------------EADAFGIDKTA 55
Query: 530 QGLIYLIDLGSHGLINNLH--CFSQVAVLRSLHHH-NVIRFIGVLYK-DRKLNLVTEYIA 585
+ + G ++ H S++ +L + HH NV+ +G K L ++ E+
Sbjct: 56 TXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCK 115
Query: 586 GGTLKELLQDP-GQPLPWG----------QRVNFARDIAAGMTYLHSMNLIHRDLNSQNC 634
G L L+ + +P+ + ++ +A GM +L S IHRDL ++N
Sbjct: 116 FGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFLASRKXIHRDLAARNI 175
Query: 635 LVRE 638
L+ E
Sbjct: 176 LLSE 179
>pdb|1V6G|A Chain A, Solution Structure Of The Lim Domain Of The Human Actin
Binding Lim Protein 2
Length = 81
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 20/39 (51%)
Query: 62 DYNGKYGEACQNCGQMMSGPVMVVGDHKFHPECFKCTSC 100
DY YG C +C Q + G V+ +HP+CF C C
Sbjct: 9 DYQRLYGTRCFSCDQFIEGEVVSALGKTYHPDCFVCAVC 47
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 17 NNIVEDEYVQALSQEWHTDCFRCSAC 42
+ +E E V AL + +H DCF C+ C
Sbjct: 22 DQFIEGEVVSALGKTYHPDCFVCAVC 47
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 69/163 (42%), Gaps = 44/163 (26%)
Query: 488 LGQGFFGQVYR-VTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINN 546
+G+G +G+V+R + H GE + +K DE++ + +E++ IY L
Sbjct: 16 VGKGRYGEVWRGLWH---GESVAVKIFSSRDEQS---WFRETE---IYNTVL-------- 58
Query: 547 LHCFSQVAVLRSLHHHNVIRFIGVLYKDR----KLNLVTEYIAGGTLKELLQDPGQPLPW 602
L H N++ FI R +L L+T Y G+L + LQ Q L
Sbjct: 59 ------------LRHDNILGFIASDMTSRNSSTQLWLITHYHEHGSLYDFLQR--QTLEP 104
Query: 603 GQRVNFARDIAAGMTYLH--------SMNLIHRDLNSQNCLVR 637
+ A A G+ +LH + HRD S+N LV+
Sbjct: 105 HLALRLAVSAACGLAHLHVEIFGTQGKPAIAHRDFKSRNVLVK 147
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 2/87 (2%)
Query: 552 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD--PGQPLPWGQRVNFA 609
++ +L H NVI +L + YI ++ L Q L F
Sbjct: 91 EIQILLRFRHENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFL 150
Query: 610 RDIAAGMTYLHSMNLIHRDLNSQNCLV 636
I G+ Y+HS N++HRDL N L+
Sbjct: 151 YQILRGLKYIHSANVLHRDLKPSNLLI 177
>pdb|2CUR|A Chain A, Solution Structure Of Skeletal Muscle Lim-Protein 1
Length = 69
Score = 34.3 bits (77), Expect = 0.25, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Query: 70 ACQNCGQMMSGPVMVVGDHKFHPECFKCTSCSCCIGDGESYALVERSILYCGLCYK 125
C C + ++ + D +H +CF C +CS + G+ + VE YC CYK
Sbjct: 7 GCVKCNKAITSGGITYQDQPWHADCFVCVTCSKKLA-GQRFTAVEDQ-YYCVDCYK 60
>pdb|2CUP|A Chain A, Solution Structure Of The Skeletal Muscle Lim-Protein 1
Length = 101
Score = 34.3 bits (77), Expect = 0.26, Method: Composition-based stats.
Identities = 27/97 (27%), Positives = 39/97 (40%), Gaps = 14/97 (14%)
Query: 12 CAGCLNNIVED-EYVQALSQEWHTDCFRCSACDVMLDNWYF-EKDGLLFCKEDYNGKYGE 69
C C I D + V ++ WH CFRC+ C L N F KD + C + +
Sbjct: 8 CVECRKPIGADSKEVHYKNRFWHDTCFRCAKCLHPLANETFVAKDNKILCNKCTTREDSP 67
Query: 70 ACQNCGQMMSGPVMVVGDHK-------FHPECFKCTS 99
C+ C + +V GD +H +CF S
Sbjct: 68 KCKGCFK-----AIVAGDQNVEYKGTVWHKDCFSGPS 99
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 75/174 (43%), Gaps = 24/174 (13%)
Query: 477 FRASDLVRGPLLGQGFFGQVYRVTH---RETG-----EVMVLKELYRVDEEAEKNFLKES 528
F +L G +LG G FG+V T +TG V +LKE + D + + E
Sbjct: 42 FPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKE--KADSSEREALMSEL 99
Query: 529 KQGLIYLIDLGSHGLINNLHCFSQVA-----VLRSLHHHNVIRFIGVLYKDRKLNLVTEY 583
K + LGSH I NL ++ + + +++ ++ + ++ +
Sbjct: 100 KM----MTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYL----RSKREKFSEDE 151
Query: 584 IAGGTLKELLQDPG-QPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
I K L ++ L + + FA +A GM +L + +HRDL ++N LV
Sbjct: 152 IEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLV 205
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 579 LVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
+V EY+ G TL++++ G P+ + + D + + H +IHRD+ N ++
Sbjct: 110 IVMEYVDGVTLRDIVHTEG-PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMI 166
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 579 LVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
+V EY+ G TL++++ G P+ + + D + + H +IHRD+ N ++
Sbjct: 93 IVMEYVDGVTLRDIVHTEG-PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMI 149
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 579 LVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
+V EY+ G TL++++ G P+ + + D + + H +IHRD+ N ++
Sbjct: 93 IVMEYVDGVTLRDIVHTEG-PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMI 149
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 579 LVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
+V EY+ G TL++++ G P+ + + D + + H +IHRD+ N ++
Sbjct: 93 IVMEYVDGVTLRDIVHTEG-PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMI 149
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 21/30 (70%)
Query: 607 NFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
+F+ +A GM +L S N IHRDL ++N L+
Sbjct: 172 SFSYQVAKGMAFLASKNCIHRDLAARNILL 201
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 21/30 (70%)
Query: 607 NFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
+F+ +A GM +L S N IHRDL ++N L+
Sbjct: 167 SFSYQVAKGMAFLASKNCIHRDLAARNILL 196
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 21/30 (70%)
Query: 607 NFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
+F+ +A GM +L S N IHRDL ++N L+
Sbjct: 165 SFSYQVAKGMAFLASKNCIHRDLAARNILL 194
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 21/30 (70%)
Query: 607 NFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
+F+ +A GM +L S N IHRDL ++N L+
Sbjct: 172 SFSYQVAKGMAFLASKNCIHRDLAARNILL 201
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 579 LVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
+V EY+ G TL++++ G P+ + + D + + H +IHRD+ N ++
Sbjct: 93 IVMEYVDGVTLRDIVHTEG-PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMI 149
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 6/90 (6%)
Query: 555 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFAR--DI 612
+LR H N+I V + + +VTE + GG ELL + + +R A I
Sbjct: 69 LLRYGQHPNIITLKDVYDDGKYVYVVTELMKGG---ELLDKILRQKFFSEREASAVLFTI 125
Query: 613 AAGMTYLHSMNLIHRDLNSQNCL-VREVGS 641
+ YLH+ ++HRDL N L V E G+
Sbjct: 126 TKTVEYLHAQGVVHRDLKPSNILYVDESGN 155
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 74/188 (39%), Gaps = 41/188 (21%)
Query: 470 EASKSRIFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESK 529
+ASK F L G LG+G FGQV EA+ + ++
Sbjct: 20 DASKWE-FPRDRLKLGKPLGRGAFGQVI---------------------EADAFGIDKTA 57
Query: 530 QGLIYLIDLGSHGLINNLH--CFSQVAVLRSLHHH-NVIRFIGVLYK-DRKLNLVTEYIA 585
+ + G ++ H S++ +L + HH NV+ +G K L ++ E+
Sbjct: 58 TCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCK 117
Query: 586 GGTLKELLQD------PGQPLPWGQRVNF---------ARDIAAGMTYLHSMNLIHRDLN 630
G L L+ P + P +F + +A GM +L S IHRDL
Sbjct: 118 FGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLA 177
Query: 631 SQNCLVRE 638
++N L+ E
Sbjct: 178 ARNILLSE 185
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 21/30 (70%)
Query: 607 NFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
+F+ +A GM +L S N IHRDL ++N L+
Sbjct: 149 SFSYQVAKGMAFLASKNCIHRDLAARNILL 178
>pdb|2E7K|A Chain A, Solution Structure Of The Pdz Domain From Human Maguk P55
Subfamily Member 2
Length = 91
Score = 33.5 bits (75), Expect = 0.38, Method: Composition-based stats.
Identities = 19/37 (51%), Positives = 24/37 (64%), Gaps = 5/37 (13%)
Query: 293 LHLGDRILEVNGTPVRDKP--LQEVECLIRNTTDTVL 327
LH+GD I EVNG PV P LQE L+RN + +V+
Sbjct: 48 LHVGDIIKEVNGQPVGSDPRALQE---LLRNASGSVI 81
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 25/41 (60%)
Query: 598 QPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
+P+ ++++ +A GM +L S IHRDL ++N L+ E
Sbjct: 194 EPITMEDLISYSFQVARGMEFLSSRKCIHRDLAARNILLSE 234
>pdb|2EGQ|A Chain A, Solution Structure Of The Fourth Lim Domain From Human
Four And A Half Lim Domains 1
Length = 77
Score = 33.5 bits (75), Expect = 0.41, Method: Composition-based stats.
Identities = 18/44 (40%), Positives = 18/44 (40%), Gaps = 4/44 (9%)
Query: 12 CAGCLNNIVE----DEYVQALSQEWHTDCFRCSACDVMLDNWYF 51
CAGC N I V Q WH CF C C V L N F
Sbjct: 18 CAGCKNPITGFGKGSSVVAYEGQSWHDYCFHCKKCSVNLANKRF 61
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 33.5 bits (75), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 44/95 (46%), Gaps = 10/95 (10%)
Query: 549 CFSQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQDPGQPLPW 602
+ ++ +++ ++H N+I + V + L LV E + L +++Q L
Sbjct: 70 AYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLXQVIQ---MELDH 125
Query: 603 GQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVR 637
+ + G+ +LHS +IHRDL N +V+
Sbjct: 126 ERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVK 160
>pdb|2CU8|A Chain A, Solution Structure Of The Lim Domain Of Human
Cysteine-Rich Protein 2
Length = 76
Score = 33.5 bits (75), Expect = 0.44, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Query: 12 CAGCLNNIVEDEYVQALSQEWHTDCFRCSACDVMLD-NWYFEKDGLLFCKE 61
C C + E V +L ++WH C +C C L + E DG FC +
Sbjct: 12 CPKCDKTVYFAEKVSSLGKDWHKFCLKCERCSKTLTPGGHAEHDGKPFCHK 62
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 33.1 bits (74), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 54/116 (46%), Gaps = 11/116 (9%)
Query: 547 LHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRV 606
L+ +++ +L+ L+H +I+ I + +V E + GG L + + + ++
Sbjct: 60 LNVETEIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKL 118
Query: 607 NFARDIAAGMTYLHSMNLIHRDLNSQN---------CLVREVGSGFDFHLGQIYLI 653
F + + A + YLH +IHRDL +N CL++ G LG+ L+
Sbjct: 119 YFYQMLLA-VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM 173
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 33.1 bits (74), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 54/116 (46%), Gaps = 11/116 (9%)
Query: 547 LHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRV 606
L+ +++ +L+ L+H +I+ I + +V E + GG L + + + ++
Sbjct: 59 LNVETEIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKL 117
Query: 607 NFARDIAAGMTYLHSMNLIHRDLNSQN---------CLVREVGSGFDFHLGQIYLI 653
F + + A + YLH +IHRDL +N CL++ G LG+ L+
Sbjct: 118 YFYQMLLA-VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM 172
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 33.1 bits (74), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 54/116 (46%), Gaps = 11/116 (9%)
Query: 547 LHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRV 606
L+ +++ +L+ L+H +I+ I + +V E + GG L + + + ++
Sbjct: 60 LNVETEIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKL 118
Query: 607 NFARDIAAGMTYLHSMNLIHRDLNSQN---------CLVREVGSGFDFHLGQIYLI 653
F + + A + YLH +IHRDL +N CL++ G LG+ L+
Sbjct: 119 YFYQMLLA-VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM 173
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 33.1 bits (74), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 54/116 (46%), Gaps = 11/116 (9%)
Query: 547 LHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRV 606
L+ +++ +L+ L+H +I+ I + +V E + GG L + + + ++
Sbjct: 60 LNVETEIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKL 118
Query: 607 NFARDIAAGMTYLHSMNLIHRDLNSQN---------CLVREVGSGFDFHLGQIYLI 653
F + + A + YLH +IHRDL +N CL++ G LG+ L+
Sbjct: 119 YFYQMLLA-VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM 173
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 33.1 bits (74), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 74/188 (39%), Gaps = 41/188 (21%)
Query: 470 EASKSRIFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESK 529
+ASK F L G LG+G FGQV EA+ + ++
Sbjct: 18 DASKWE-FPRDRLKLGKPLGRGAFGQVI---------------------EADAFGIDKTA 55
Query: 530 QGLIYLIDLGSHGLINNLH--CFSQVAVLRSLHHH-NVIRFIGVLYK-DRKLNLVTEYIA 585
+ + G ++ H S++ +L + HH NV+ +G K L ++ E+
Sbjct: 56 TCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCK 115
Query: 586 GGTLKELLQD------PGQPLPWGQRVNF---------ARDIAAGMTYLHSMNLIHRDLN 630
G L L+ P + P +F + +A GM +L S IHRDL
Sbjct: 116 FGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLA 175
Query: 631 SQNCLVRE 638
++N L+ E
Sbjct: 176 ARNILLSE 183
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 33.1 bits (74), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 74/188 (39%), Gaps = 41/188 (21%)
Query: 470 EASKSRIFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESK 529
+ASK F L G LG+G FGQV EA+ + ++
Sbjct: 18 DASKWE-FPRDRLKLGKPLGRGAFGQVI---------------------EADAFGIDKTA 55
Query: 530 QGLIYLIDLGSHGLINNLH--CFSQVAVLRSLHHH-NVIRFIGVLYK-DRKLNLVTEYIA 585
+ + G ++ H S++ +L + HH NV+ +G K L ++ E+
Sbjct: 56 TCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCK 115
Query: 586 GGTLKELLQD------PGQPLPWGQRVNF---------ARDIAAGMTYLHSMNLIHRDLN 630
G L L+ P + P +F + +A GM +L S IHRDL
Sbjct: 116 FGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLA 175
Query: 631 SQNCLVRE 638
++N L+ E
Sbjct: 176 ARNILLSE 183
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 33.1 bits (74), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 74/188 (39%), Gaps = 41/188 (21%)
Query: 470 EASKSRIFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESK 529
+ASK F L G LG+G FGQV EA+ + ++
Sbjct: 18 DASKWE-FPRDRLKLGKPLGRGAFGQVI---------------------EADAFGIDKTA 55
Query: 530 QGLIYLIDLGSHGLINNLH--CFSQVAVLRSLHHH-NVIRFIGVLYK-DRKLNLVTEYIA 585
+ + G ++ H S++ +L + HH NV+ +G K L ++ E+
Sbjct: 56 TCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCK 115
Query: 586 GGTLKELLQD------PGQPLPWGQRVNF---------ARDIAAGMTYLHSMNLIHRDLN 630
G L L+ P + P +F + +A GM +L S IHRDL
Sbjct: 116 FGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLA 175
Query: 631 SQNCLVRE 638
++N L+ E
Sbjct: 176 ARNILLSE 183
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 33.1 bits (74), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Query: 547 LHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRV 606
L+ +++ +L+ L+H +I+ I + +V E + GG L + + + ++
Sbjct: 185 LNVETEIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKL 243
Query: 607 NFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
F + + A + YLH +IHRDL +N L+
Sbjct: 244 YFYQMLLA-VQYLHENGIIHRDLKPENVLL 272
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 33.1 bits (74), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 74/188 (39%), Gaps = 41/188 (21%)
Query: 470 EASKSRIFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESK 529
+ASK F L G LG+G FGQV EA+ + ++
Sbjct: 55 DASKWE-FPRDRLKLGKPLGRGAFGQVI---------------------EADAFGIDKTA 92
Query: 530 QGLIYLIDLGSHGLINNLH--CFSQVAVLRSLHHH-NVIRFIGVLYK-DRKLNLVTEYIA 585
+ + G ++ H S++ +L + HH NV+ +G K L ++ E+
Sbjct: 93 TCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCK 152
Query: 586 GGTLKELLQD------PGQPLPWGQRVNF---------ARDIAAGMTYLHSMNLIHRDLN 630
G L L+ P + P +F + +A GM +L S IHRDL
Sbjct: 153 FGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLA 212
Query: 631 SQNCLVRE 638
++N L+ E
Sbjct: 213 ARNILLSE 220
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 33.1 bits (74), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 42/80 (52%), Gaps = 7/80 (8%)
Query: 560 HHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD---PGQPLPWGQRVNFARDIAAGM 616
HH +VI +++ LN++ EY+ TL ++L+ G+ +P + + +
Sbjct: 99 HHKSVIVNPS---QNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAV 154
Query: 617 TYLHSMNLIHRDLNSQNCLV 636
++HS+ + HRD+ QN LV
Sbjct: 155 GFIHSLGICHRDIKPQNLLV 174
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 32.7 bits (73), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 74/188 (39%), Gaps = 41/188 (21%)
Query: 470 EASKSRIFRASDLVRGPLLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESK 529
+ASK F L G LG+G FGQV EA+ + ++
Sbjct: 9 DASKWE-FPRDRLKLGKPLGRGAFGQVI---------------------EADAFGIDKTA 46
Query: 530 QGLIYLIDLGSHGLINNLH--CFSQVAVLRSLHHH-NVIRFIGVLYK-DRKLNLVTEYIA 585
+ + G ++ H S++ +L + HH NV+ +G K L ++ E+
Sbjct: 47 TCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCK 106
Query: 586 GGTLKELLQD------PGQPLPWGQRVNF---------ARDIAAGMTYLHSMNLIHRDLN 630
G L L+ P + P +F + +A GM +L S IHRDL
Sbjct: 107 FGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLA 166
Query: 631 SQNCLVRE 638
++N L+ E
Sbjct: 167 ARNILLSE 174
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 32.7 bits (73), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 54/116 (46%), Gaps = 11/116 (9%)
Query: 547 LHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRV 606
L+ +++ +L+ L+H +I+ I + +V E + GG L + + + ++
Sbjct: 66 LNVETEIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKL 124
Query: 607 NFARDIAAGMTYLHSMNLIHRDLNSQN---------CLVREVGSGFDFHLGQIYLI 653
F + + A + YLH +IHRDL +N CL++ G LG+ L+
Sbjct: 125 YFYQMLLA-VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM 179
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 32.7 bits (73), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 44/95 (46%), Gaps = 10/95 (10%)
Query: 549 CFSQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQDPGQPLPW 602
+ ++ +++ ++H N+I + V + L LV E + L +++Q L
Sbjct: 70 AYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLXQVIQ---MELDH 125
Query: 603 GQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVR 637
+ + G+ +LHS +IHRDL N +V+
Sbjct: 126 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK 160
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 32.7 bits (73), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 68/165 (41%), Gaps = 39/165 (23%)
Query: 487 LLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINN 546
+ GQG FG V + TG + +K++ + + +N
Sbjct: 30 MAGQGTFGTVQLGKEKSTGMSVAIKKV--IQDPRFRN---------------------RE 66
Query: 547 LHCFSQVAVLRSLHHHNVIRFIGVLY----KDRK---LNLVTEYIAGGTL----KELLQD 595
L +AV LHH N+++ Y +DR+ LN+V EY+ TL + +
Sbjct: 67 LQIMQDLAV---LHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVP-DTLHRCCRNYYRR 122
Query: 596 PGQPLPWGQRVNFARDI-AAGMTYLHSMNLIHRDLNSQNCLVREV 639
P P +V + I + G +L S+N+ HRD+ N LV E
Sbjct: 123 QVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEA 167
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 32.7 bits (73), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 43/101 (42%), Gaps = 7/101 (6%)
Query: 557 RSLHHHNVIRFIGVLYKDRKLN----LVTEYIAGGTLK---ELLQDPGQPLPWGQRVNFA 609
R +H N++R + ++R L+ + GTL E L+D G L Q +
Sbjct: 81 RLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLL 140
Query: 610 RDIAAGMTYLHSMNLIHRDLNSQNCLVREVGSGFDFHLGQI 650
I G+ +H+ HRDL N L+ + G LG +
Sbjct: 141 LGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSM 181
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 32.7 bits (73), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Query: 547 LHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRV 606
L+ +++ +L+ L+H +I+ I + +V E + GG L + + + ++
Sbjct: 199 LNVETEIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKL 257
Query: 607 NFARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
F + + A + YLH +IHRDL +N L+
Sbjct: 258 YFYQMLLA-VQYLHENGIIHRDLKPENVLL 286
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 32.7 bits (73), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 6/90 (6%)
Query: 555 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFAR--DI 612
+LR H N+I V + + +VTE GG ELL + + +R A I
Sbjct: 69 LLRYGQHPNIITLKDVYDDGKYVYVVTELXKGG---ELLDKILRQKFFSEREASAVLFTI 125
Query: 613 AAGMTYLHSMNLIHRDLNSQNCL-VREVGS 641
+ YLH+ ++HRDL N L V E G+
Sbjct: 126 TKTVEYLHAQGVVHRDLKPSNILYVDESGN 155
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 32.7 bits (73), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 44/91 (48%), Gaps = 2/91 (2%)
Query: 549 CFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTE-YIAGGTLKELLQDPGQPLPWGQRVN 607
+ ++ +++ ++H N+I + V + L + YI + L Q +R++
Sbjct: 70 AYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMS 129
Query: 608 FA-RDIAAGMTYLHSMNLIHRDLNSQNCLVR 637
+ + G+ +LHS +IHRDL N +V+
Sbjct: 130 YLLYQMLVGIKHLHSAGIIHRDLKPSNIVVK 160
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 32.7 bits (73), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 44/95 (46%), Gaps = 10/95 (10%)
Query: 549 CFSQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQDPGQPLPW 602
+ ++ +++ ++H N+I + V + L LV E + L +++Q L
Sbjct: 70 AYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLXQVIQ---MELDH 125
Query: 603 GQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVR 637
+ + G+ +LHS +IHRDL N +V+
Sbjct: 126 ERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVK 160
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 32.7 bits (73), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 44/95 (46%), Gaps = 10/95 (10%)
Query: 549 CFSQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQDPGQPLPW 602
+ ++ +++ ++H N+I + V + L LV E + L +++Q L
Sbjct: 63 AYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLXQVIQ---MELDH 118
Query: 603 GQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVR 637
+ + G+ +LHS +IHRDL N +V+
Sbjct: 119 ERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVK 153
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 32.7 bits (73), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 44/91 (48%), Gaps = 2/91 (2%)
Query: 549 CFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTE-YIAGGTLKELLQDPGQPLPWGQRVN 607
+ ++ +++ ++H N+I + V + L + YI + L Q +R++
Sbjct: 70 AYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMS 129
Query: 608 FA-RDIAAGMTYLHSMNLIHRDLNSQNCLVR 637
+ + G+ +LHS +IHRDL N +V+
Sbjct: 130 YLLYQMLVGIKHLHSAGIIHRDLKPSNIVVK 160
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 32.7 bits (73), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 33/160 (20%), Positives = 67/160 (41%), Gaps = 32/160 (20%)
Query: 487 LLGQGF--FGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLI 544
++G+GF V ++ TGE + ++ R++ EA N + QG +++ L
Sbjct: 16 VIGKGFEDLMTVNLARYKPTGEYVTVR---RINLEACSNEMVTFLQGELHVSKL------ 66
Query: 545 NNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELL----QDPGQPL 600
+H N++ + D +L +VT ++A G+ K+L+ D L
Sbjct: 67 --------------FNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNEL 112
Query: 601 PWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
+ + + Y+H M +HR + + + L+ G
Sbjct: 113 AIAY---ILQGVLKALDYIHHMGYVHRSVKASHILISVDG 149
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 32.7 bits (73), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 44/91 (48%), Gaps = 2/91 (2%)
Query: 549 CFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTE-YIAGGTLKELLQDPGQPLPWGQRVN 607
+ ++ +++ ++H N+I + V + L + YI + L Q +R++
Sbjct: 70 AYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMS 129
Query: 608 FA-RDIAAGMTYLHSMNLIHRDLNSQNCLVR 637
+ + G+ +LHS +IHRDL N +V+
Sbjct: 130 YLLYQMLVGIKHLHSAGIIHRDLKPSNIVVK 160
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 32.7 bits (73), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 33/160 (20%), Positives = 67/160 (41%), Gaps = 32/160 (20%)
Query: 487 LLGQGF--FGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLI 544
++G+GF V ++ TGE + ++ R++ EA N + QG +++ L
Sbjct: 32 VIGKGFEDLMTVNLARYKPTGEYVTVR---RINLEACSNEMVTFLQGELHVSKL------ 82
Query: 545 NNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELL----QDPGQPL 600
+H N++ + D +L +VT ++A G+ K+L+ D L
Sbjct: 83 --------------FNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNEL 128
Query: 601 PWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
+ + + Y+H M +HR + + + L+ G
Sbjct: 129 AIAY---ILQGVLKALDYIHHMGYVHRSVKASHILISVDG 165
>pdb|2EV8|A Chain A, Solution Structure Of The Erythroid P55 Pdz Domain
Length = 97
Score = 32.7 bits (73), Expect = 0.76, Method: Composition-based stats.
Identities = 13/31 (41%), Positives = 22/31 (70%)
Query: 292 SLHLGDRILEVNGTPVRDKPLQEVECLIRNT 322
SLH+GD ILE+NGT V + + +++ ++ T
Sbjct: 54 SLHVGDEILEINGTNVTNHSVDQLQKAMKET 84
>pdb|1WIG|A Chain A, Solution Structure Of Rsgi Ruh-019, A Lim Domain Of Actin
Binding Lim Protein 2 (kiaa1808 Protein) From Human Cdna
Length = 73
Score = 32.3 bits (72), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 24/49 (48%)
Query: 71 CQNCGQMMSGPVMVVGDHKFHPECFKCTSCSCCIGDGESYALVERSILY 119
C +C + ++G V+ G+ +HP C C C +GE L SI +
Sbjct: 8 CDSCEKYITGRVLEAGEKHYHPSCALCVRCGQMFAEGEEMYLQGSSIWH 56
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 32.3 bits (72), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
F I G+ Y+HS N++HRDL N L+
Sbjct: 129 FLYQILRGLKYIHSANVLHRDLKPSNLLL 157
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 32.3 bits (72), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
F I G+ Y+HS N++HRDL N L+
Sbjct: 129 FLYQILRGLKYIHSANVLHRDLKPSNLLL 157
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 32.3 bits (72), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 6/92 (6%)
Query: 552 QVAVLRSLHHHNVI--RFIGVLYKD---RKLNLVTEYIAGGTLKELLQDPGQPLPWGQRV 606
++ +L HH N++ R I V +++ KL LVTE + L +++ D +
Sbjct: 79 EIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTE-LMRTDLAQVIHDQRIVISPQHIQ 137
Query: 607 NFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
F I G+ LH ++HRDL+ N L+ +
Sbjct: 138 YFMYHILLGLHVLHEAGVVHRDLHPGNILLAD 169
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 32.3 bits (72), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 69/168 (41%), Gaps = 46/168 (27%)
Query: 487 LLGQGFFGQVY---RVTHRETGEVMVLKELYR---VDEEAEKNFLKESKQGLIYLIDLGS 540
+LG G +G+V+ +++ +TG++ +K L + V + + +Q L ++
Sbjct: 61 VLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHI----- 115
Query: 541 HGLINNLHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPL 600
Q L +LH+ + KL+L+ +YI GG L L
Sbjct: 116 ----------RQSPFLVTLHY--------AFQTETKLHLILDYINGGELFTHLS------ 151
Query: 601 PWGQRVNFAR--------DIAAGMTYLHSMNLIHRDLNSQNCLVREVG 640
QR F +I + +LH + +I+RD+ +N L+ G
Sbjct: 152 ---QRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNG 196
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 32.3 bits (72), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
F I G+ Y+HS N++HRDL N L+
Sbjct: 133 FLYQILRGLKYIHSANVLHRDLKPSNLLL 161
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 32.3 bits (72), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 2/87 (2%)
Query: 552 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD--PGQPLPWGQRVNFA 609
++ +L + H N+I ++ + YI ++ L Q L F
Sbjct: 73 EIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 132
Query: 610 RDIAAGMTYLHSMNLIHRDLNSQNCLV 636
I G+ Y+HS N++HRDL N L+
Sbjct: 133 YQILRGLKYIHSANVLHRDLKPSNLLL 159
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 32.3 bits (72), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 6/92 (6%)
Query: 552 QVAVLRSLHHHNVI--RFIGVLYKD---RKLNLVTEYIAGGTLKELLQDPGQPLPWGQRV 606
++ +L HH N++ R I V +++ KL LVTE + L +++ D +
Sbjct: 79 EIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTE-LMRTDLAQVIHDQRIVISPQHIQ 137
Query: 607 NFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 638
F I G+ LH ++HRDL+ N L+ +
Sbjct: 138 YFMYHILLGLHVLHEAGVVHRDLHPGNILLAD 169
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 32.3 bits (72), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
F I G+ Y+HS N++HRDL N L+
Sbjct: 133 FLYQILRGLKYIHSANVLHRDLKPSNLLL 161
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 32.3 bits (72), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
F I G+ Y+HS N++HRDL N L+
Sbjct: 133 FLYQILRGLKYIHSANVLHRDLKPSNLLL 161
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 32.3 bits (72), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
F I G+ Y+HS N++HRDL N L+
Sbjct: 134 FLYQILRGLKYIHSANVLHRDLKPSNLLL 162
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 32.3 bits (72), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
F I G+ Y+HS N++HRDL N L+
Sbjct: 131 FLYQILRGLKYIHSANVLHRDLKPSNLLL 159
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 32.3 bits (72), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
F I G+ Y+HS N++HRDL N L+
Sbjct: 133 FLYQILRGLKYIHSANVLHRDLKPSNLLL 161
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 32.3 bits (72), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
F I G+ Y+HS N++HRDL N L+
Sbjct: 129 FLYQILRGLKYIHSANVLHRDLKPSNLLL 157
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 32.3 bits (72), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
F I G+ Y+HS N++HRDL N L+
Sbjct: 134 FLYQILRGLKYIHSANVLHRDLKPSNLLL 162
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 32.3 bits (72), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
F I G+ Y+HS N++HRDL N L+
Sbjct: 135 FLYQILRGLKYIHSANVLHRDLKPSNLLL 163
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 32.3 bits (72), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
F I G+ Y+HS N++HRDL N L+
Sbjct: 126 FLYQILRGLKYIHSANVLHRDLKPSNLLL 154
>pdb|2EJY|A Chain A, Solution Structure Of The P55 Pdz T85c Domain Complexed
With The Glycophorin C F127c Peptide
Length = 97
Score = 32.3 bits (72), Expect = 0.91, Method: Composition-based stats.
Identities = 13/31 (41%), Positives = 22/31 (70%)
Query: 292 SLHLGDRILEVNGTPVRDKPLQEVECLIRNT 322
SLH+GD ILE+NGT V + + +++ ++ T
Sbjct: 54 SLHVGDEILEINGTNVTNHSVDQLQKAMKET 84
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 32.3 bits (72), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
F I G+ Y+HS N++HRDL N L+
Sbjct: 149 FLYQILRGLKYIHSANVLHRDLKPSNLLL 177
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 32.3 bits (72), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
F I G+ Y+HS N++HRDL N L+
Sbjct: 133 FLYQILRGLKYIHSANVLHRDLKPSNLLL 161
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 32.3 bits (72), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
F I G+ Y+HS N++HRDL N L+
Sbjct: 127 FLYQILRGLKYIHSANVLHRDLKPSNLLL 155
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 32.3 bits (72), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
F I G+ Y+HS N++HRDL N L+
Sbjct: 137 FLYQILRGLKYIHSANVLHRDLKPSNLLL 165
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 32.3 bits (72), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
F I G+ Y+HS N++HRDL N L+
Sbjct: 129 FLYQILRGLKYIHSANVLHRDLKPSNLLL 157
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 32.3 bits (72), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
F I G+ Y+HS N++HRDL N L+
Sbjct: 129 FLYQILRGLKYIHSANVLHRDLKPSNLLL 157
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 32.3 bits (72), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
F I G+ Y+HS N++HRDL N L+
Sbjct: 133 FLYQILRGLKYIHSANVLHRDLKPSNLLL 161
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 32.3 bits (72), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
F I G+ Y+HS N++HRDL N L+
Sbjct: 127 FLYQILRGLKYIHSANVLHRDLKPSNLLL 155
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 32.3 bits (72), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 608 FARDIAAGMTYLHSMNLIHRDLNSQNCLV 636
F I G+ Y+HS N++HRDL N L+
Sbjct: 131 FLYQILRGLKYIHSANVLHRDLKPSNLLL 159
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 44/91 (48%), Gaps = 2/91 (2%)
Query: 549 CFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTE-YIAGGTLKELLQDPGQPLPWGQRVN 607
+ ++ +++ ++H N+I + V + L + YI + L Q +R++
Sbjct: 70 AYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMS 129
Query: 608 FA-RDIAAGMTYLHSMNLIHRDLNSQNCLVR 637
+ + G+ +LHS +IHRDL N +V+
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK 160
>pdb|3O46|A Chain A, Crystal Structure Of The Pdz Domain Of Mpp7
Length = 93
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 12/23 (52%), Positives = 17/23 (73%)
Query: 293 LHLGDRILEVNGTPVRDKPLQEV 315
+H+GD + EVNG PV DK +E+
Sbjct: 47 IHVGDELREVNGIPVEDKRPEEI 69
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 44/91 (48%), Gaps = 2/91 (2%)
Query: 549 CFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTE-YIAGGTLKELLQDPGQPLPWGQRVN 607
+ ++ +++ ++H N+I + V + L + YI + L Q +R++
Sbjct: 70 AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMS 129
Query: 608 FA-RDIAAGMTYLHSMNLIHRDLNSQNCLVR 637
+ + G+ +LHS +IHRDL N +V+
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK 160
>pdb|3E7E|A Chain A, Structure And Substrate Recruitment Of The Human Spindle
Checkpoint Kinase Bub
Length = 365
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 62/161 (38%), Gaps = 27/161 (16%)
Query: 487 LLGQGFFGQVYRVTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINN 546
LLG+G F QVY T + + + +K LK K + +G+
Sbjct: 72 LLGEGAFAQVYEATQGDLNDA----------KNKQKFVLKVQKPANPWEFYIGTQ----- 116
Query: 547 LHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ----DPGQPLPW 602
+ L+ H ++F LV E + GTL + P + +P
Sbjct: 117 -----LMERLKPSMQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQ 171
Query: 603 GQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREVGSGF 643
G ++FA + + +H +IH D+ N + +G+GF
Sbjct: 172 GLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFI---LGNGF 209
>pdb|2LXD|A Chain A, Backbone 1h, 13c, And 15n Chemical Shift Assignments For
Lmo2(Lim2)- Ldb1(Lid)
Length = 125
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Query: 71 CQNCGQMMSGPVMV--VGDHKFHPECFKCTSCSCCIGDGESYALVERSIL 118
C +C + + M V D +H ECFKC +C G+ Y L+ I+
Sbjct: 13 CASCDKRIRAYEMTMRVKDKVYHLECFKCAACQKHFSVGDRYLLINSDIV 62
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 60/149 (40%), Gaps = 21/149 (14%)
Query: 488 LGQGFFGQVYR-VTHRETGEVMVLKELYRVDEEAEKNFLKESKQGLIYLIDLGSHGLINN 546
LG+G FG+V + V HR G + LK + V++ KE+ + I +++ + +N
Sbjct: 41 LGEGTFGRVVQCVDHRRGGARVALKIIKNVEK------YKEAARLEINVLEKINEKDPDN 94
Query: 547 LHCFSQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRV 606
+ Q+ H H I F E + T L + P P Q
Sbjct: 95 KNLCVQMFDWFDYHGHMCISF--------------ELLGLSTFDFLKDNNYLPYPIHQVR 140
Query: 607 NFARDIAAGMTYLHSMNLIHRDLNSQNCL 635
+ A + + +LH L H DL +N L
Sbjct: 141 HMAFQLCQAVKFLHDNKLTHTDLKPENIL 169
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.324 0.139 0.433
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,516,618
Number of Sequences: 62578
Number of extensions: 786494
Number of successful extensions: 4622
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 912
Number of HSP's successfully gapped in prelim test: 182
Number of HSP's that attempted gapping in prelim test: 2564
Number of HSP's gapped (non-prelim): 1287
length of query: 681
length of database: 14,973,337
effective HSP length: 105
effective length of query: 576
effective length of database: 8,402,647
effective search space: 4839924672
effective search space used: 4839924672
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)