Query psy5085
Match_columns 319
No_of_seqs 298 out of 1364
Neff 7.2
Searched_HMMs 29240
Date Fri Aug 16 16:56:37 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5085.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/5085hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rb5_A Na/Ca exchange protein; 100.0 1.2E-53 4.1E-58 399.7 24.3 230 86-319 3-264 (298)
2 3us9_A Sodium/calcium exchange 100.0 7.3E-52 2.5E-56 386.8 28.1 229 91-319 8-288 (295)
3 3ead_A Na/Ca exchange protein; 100.0 5.3E-33 1.8E-37 232.2 14.7 134 90-227 2-136 (137)
4 3gin_A Sodium/calcium exchange 100.0 1.1E-30 3.9E-35 223.1 15.6 129 87-215 17-160 (160)
5 3e9t_A Na/Ca exchange protein; 100.0 7.3E-29 2.5E-33 200.8 14.4 111 93-207 3-114 (114)
6 3gin_A Sodium/calcium exchange 100.0 1.2E-28 4.1E-33 210.6 14.1 123 197-319 11-151 (160)
7 3fso_A Integrin beta-4, GP150; 100.0 4.1E-28 1.4E-32 199.0 14.1 112 91-206 4-122 (123)
8 3fso_A Integrin beta-4, GP150; 100.0 3.2E-28 1.1E-32 199.6 13.2 113 207-319 4-122 (123)
9 3e9t_A Na/Ca exchange protein; 100.0 1.2E-27 4.2E-32 193.6 15.1 110 210-319 4-113 (114)
10 3ead_A Na/Ca exchange protein; 99.9 7E-27 2.4E-31 195.1 15.2 114 206-319 2-115 (137)
11 2qvk_A CBD2, sodium/calcium ex 99.9 3.2E-26 1.1E-30 199.6 15.8 96 204-299 1-97 (192)
12 2lt9_A Protein SLC8A3; NCX, NC 99.9 1E-28 3.6E-33 209.2 0.0 113 207-319 10-150 (157)
13 3rb5_A Na/Ca exchange protein; 99.9 2.6E-24 8.7E-29 201.1 12.9 116 204-319 5-120 (298)
14 2qvk_A CBD2, sodium/calcium ex 99.9 1.2E-23 3.9E-28 183.5 12.7 96 89-184 2-99 (192)
15 2lt9_A Protein SLC8A3; NCX, NC 99.8 4.2E-25 1.4E-29 187.1 0.0 118 90-207 9-151 (157)
16 3us9_A Sodium/calcium exchange 99.9 1.1E-21 3.9E-26 182.8 13.7 113 207-319 8-138 (295)
17 3ubf_A Neural-cadherin; cell a 95.3 0.88 3E-05 41.6 16.7 129 101-248 114-251 (316)
18 3qrb_A Cadherin-1; cell adhesi 93.8 2 6.8E-05 36.8 14.6 191 98-317 3-213 (213)
19 2qvi_A Cadherin-2; beta barrel 93.7 2.8 9.6E-05 36.1 15.4 191 98-317 3-215 (215)
20 3ubh_A Neural-cadherin; cell a 93.5 2.2 7.4E-05 40.7 15.6 76 170-247 176-255 (419)
21 3ppe_A Vascular endothelial ca 92.5 4.4 0.00015 34.4 17.5 131 170-317 63-203 (203)
22 2a4e_A Cadherin-11; dimer, cal 92.4 4.8 0.00016 34.6 15.1 184 100-317 6-208 (215)
23 3ubf_A Neural-cadherin; cell a 89.3 5.1 0.00017 36.4 12.7 76 173-251 68-149 (316)
24 3q2w_A Cadherin-2; cell adhesi 87.2 6.6 0.00023 38.8 12.9 138 99-251 4-153 (559)
25 3q2v_A Cadherin-1; cell adhesi 87.0 20 0.0007 35.1 16.3 136 97-250 2-153 (550)
26 3mvs_A Cadherin-23, otocadheri 85.8 8.8 0.0003 32.6 11.5 126 170-317 72-205 (210)
27 3ubh_A Neural-cadherin; cell a 84.1 28 0.00097 32.7 15.7 56 195-251 94-154 (419)
28 3q2w_A Cadherin-2; cell adhesi 84.0 23 0.00079 34.8 15.0 124 97-232 108-245 (559)
29 3k5r_A Cadherin 13; mouse, str 83.7 19 0.00067 30.5 15.0 81 170-252 68-154 (218)
30 1q55_A EP-cadherin, C-cadherin 83.0 14 0.00047 38.8 13.4 62 170-233 223-287 (880)
31 1l3w_A EP-cadherin, C-cadherin 82.2 10 0.00035 37.3 11.5 121 97-231 114-248 (546)
32 3lnd_A CDH6 protein, cadherin 78.0 5.3 0.00018 34.0 7.0 129 170-317 65-207 (207)
33 1l3w_A EP-cadherin, C-cadherin 76.9 22 0.00076 34.8 12.1 61 170-232 74-137 (546)
34 2a62_A Cadherin-8; extracellul 76.0 38 0.0013 30.8 12.6 82 170-251 173-258 (322)
35 3q2v_A Cadherin-1; cell adhesi 75.4 44 0.0015 32.6 13.8 63 170-232 290-355 (550)
36 1q55_A EP-cadherin, C-cadherin 74.5 12 0.00039 39.4 9.7 60 170-231 336-397 (880)
37 2x2u_A Proto-oncogene tyrosine 71.9 19 0.00064 31.4 9.1 104 196-317 113-236 (246)
38 4dqa_A Uncharacterized protein 61.4 42 0.0014 31.1 9.6 77 107-183 25-116 (355)
39 4ay0_A Chaperone protein CAF1M 56.6 95 0.0033 26.6 19.0 84 95-181 14-100 (218)
40 3poh_A Endo-beta-N-acetylgluco 56.3 38 0.0013 32.7 8.5 80 103-183 38-132 (451)
41 3poh_A Endo-beta-N-acetylgluco 48.4 38 0.0013 32.7 7.1 78 224-302 43-137 (451)
42 4dqa_A Uncharacterized protein 46.0 67 0.0023 29.7 8.3 74 223-296 25-113 (355)
43 2a62_A Cadherin-8; extracellul 42.5 1.9E+02 0.0065 26.0 10.9 29 196-224 90-119 (322)
44 1zvn_A Mn-cadherin; strand dim 39.3 1.1E+02 0.0038 22.4 7.4 33 285-317 65-99 (99)
45 2co7_B SAFB chaperone, putativ 35.2 2.1E+02 0.0072 24.4 17.2 87 92-181 11-98 (221)
46 2yst_A Protocadherin-7; BH-PCD 35.0 51 0.0018 24.9 4.8 102 201-317 3-113 (119)
47 1zxk_A Cadherin-8; strand dime 30.9 1.5E+02 0.0053 21.5 7.4 33 285-317 64-98 (98)
48 1klf_A FIMC chaperone, chapero 27.2 2.8E+02 0.0095 23.3 20.3 83 97-181 4-88 (205)
49 2yqg_A Desmoglein-2, HDGC; cad 27.1 27 0.00091 27.0 1.8 40 170-211 80-120 (123)
50 4djm_A DRAB; chaperone, PILI; 26.1 3.2E+02 0.011 23.6 18.2 86 93-181 22-108 (239)
No 1
>3rb5_A Na/Ca exchange protein; CBD12, calcium binding and regulation, metal binding protein; 2.35A {Drosophila melanogaster} PDB: 3rb7_A 3e9u_A
Probab=100.00 E-value=1.2e-53 Score=399.69 Aligned_cols=230 Identities=28% Similarity=0.463 Sum_probs=199.3
Q ss_pred cCCCCCeeEEEEEeeeEEEecCCeEEEEEEEEeCCCCceEEEEEEEeCCCccCCCCeeeeceEEEEeCCceEEEEEEEEe
Q psy5085 86 IETKTNYAIIEFHAVTVAVREDIGSFKVGILRHGNLQNIARVRVDSIDGSAKQGKRYQKVNQTVVFKENETEKFVTIRII 165 (319)
Q Consensus 86 ~~~d~~~~~i~F~~~~y~V~E~~g~v~vtV~R~g~~~~~vtV~~~t~dGTA~~g~Dy~~~~gtl~F~~Get~k~i~I~Ii 165 (319)
+++|++++.|+|++++|+|.|++|.+.|+|.|+|+..++++|+|.|.+|||.+|.||.+.+|+|+|+||+++|+|+|+|+
T Consensus 3 ~~ddd~~g~i~F~~~~y~V~E~~g~v~vtV~R~g~~~~~vtV~y~T~~GTA~ag~Dy~~~~gtl~F~~Get~kti~V~I~ 82 (298)
T 3rb5_A 3 DEEADDPIRMYFEPGHYTVMENCGEFEVRVVRRGDISTYASVEYETQDGTASAGTDFVGRKGLLSFPPGVDEQRFRIEVI 82 (298)
T ss_dssp --------CEEESSSEEEEETTSCCEECCEEECSCCSSCEEEEEEEEESSSCBTTTBCCCEEEEEECTTCCEECCEECBC
T ss_pred CCCCCCceEEEEeCCEEEEecCceEEEEEEEEECCCCccEEEEEEeeCCccCCCCCccccceEEEECCCceEEEEEEEEe
Confidence 45568899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCceEEEEEEE-eecCCCCcccccceeeeEEEEeeCCCCceeeeeecceeecCCCceEEEeEEecCCCCCcEEEE
Q psy5085 166 NDEKWDPVEEFFLRLT-LLNKSADMVKLGGLNIMEVTIIDDDDPGIIQFEKRGYLVKESSGVVAIPILRTSGSDGDVSVK 244 (319)
Q Consensus 166 dD~i~E~dE~F~v~L~-~~~~~~~~~~lg~~~~a~VtI~Ddd~~g~~~F~~~~~~V~E~~g~~~v~V~R~~g~~g~v~V~ 244 (319)
||.++|++|+|.|.|+ |.+++. ||.++.++|+|+|||++|+|+|..+.|.|.|+.|.+.++|.|+++..+.++|.
T Consensus 83 dD~~~E~dEtF~v~Ls~p~~~a~----lg~~~~atvtI~ddD~~g~~~f~~~~~~V~E~~g~~~~~V~Rs~~~~g~vtV~ 158 (298)
T 3rb5_A 83 DDDVFEEDECFYIRLFNPSEGVK----LAVPMIATVMILDDDHAGIFAFTDSVFEITESVGRFELKVMRYSGARGTVIVP 158 (298)
T ss_dssp CCSSCCCCEEEEEEEECCCTTCC----BCSCSEEEEEEECCCCCCEEECSCSEEEECTTCCCEEEEEEEESCCCSCEEEE
T ss_pred CCCCccCcEEEEEEEeCCCCCcE----ECCCceEEEEEeccccccccccccccEEeecCCceEEEEEEEEecCCCCEEEE
Confidence 9999999999999999 755443 99999999999999999999999999999999999999999999999999999
Q ss_pred EEeeeccccCCCcccccceEEEEeCCeeEEEEEEEeecCCCCCCCeEEEEEEeCC-------------------------
Q psy5085 245 WKTVDKTAISSRDYKGGSGVITFKHGEVRRVLEIPIIDDLKPEKDEYFEVKLSEP------------------------- 299 (319)
Q Consensus 245 ~~t~dGTA~~G~DY~~~~g~l~F~~get~k~i~I~IidD~~~E~dE~F~v~L~~p------------------------- 299 (319)
|.|.+|||++|.||.+.+|+|+|++||++|+|.|+|+||.++|++|+|.|.|++|
T Consensus 159 ~~T~dGTA~~g~Dy~~~~gtltF~~Get~kti~V~IidD~~~E~dEtF~v~Ls~p~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (298)
T 3rb5_A 159 YWTENDTATESKDYEGARGELVFENNESEKFIDLFILEESSYEKDVSFKVHIGEPRLAPDDELAAKIKEVEKKPVQDLTE 238 (298)
T ss_dssp EEEEEC-----CCSCCCEEEEEECTTCCEEEEEEC---------CEEEEEEECCCEECTTSHHHHHHHHHTTSBTTTCCH
T ss_pred EEecCCccCCCccceecccEEEECCCCEEEEEEEEEeCCCcccCceEEEEEEcCCccccccccccccccccccccchhhh
Confidence 9999999999999999999999999999999999999999999999999999999
Q ss_pred ------CCCeeeeccceEEEEEeCCC
Q psy5085 300 ------TGGAKIGVVNHCAVTITNDD 319 (319)
Q Consensus 300 ------~g~~~lG~~~~~~VtI~ddd 319 (319)
.|+|+||++++++|+|.+|+
T Consensus 239 ~~~~~~~g~p~lg~~~~~~v~i~es~ 264 (298)
T 3rb5_A 239 LDRILLLSKPRNGELTTAYVRIRESQ 264 (298)
T ss_dssp HHHHHHTTSCEECSCCEEEEEEC---
T ss_pred hhhhhhcCCCccCCceEEEEEEEECH
Confidence 38999999999999999985
No 2
>3us9_A Sodium/calcium exchanger 1; beta-sandwich, calcium binding protein, intracellular, metal protein; 2.68A {Canis lupus familiaris} PDB: 2klt_A
Probab=100.00 E-value=7.3e-52 Score=386.76 Aligned_cols=229 Identities=32% Similarity=0.526 Sum_probs=215.0
Q ss_pred CeeEEEEEeeeEEEecCCeEEEEEEEEeC-CCCceEEEEEEEeCCCccCCCCeeeeceEEEEeCCceEEEEEEEEecCCC
Q psy5085 91 NYAIIEFHAVTVAVREDIGSFKVGILRHG-NLQNIARVRVDSIDGSAKQGKRYQKVNQTVVFKENETEKFVTIRIINDEK 169 (319)
Q Consensus 91 ~~~~i~F~~~~y~V~E~~g~v~vtV~R~g-~~~~~vtV~~~t~dGTA~~g~Dy~~~~gtl~F~~Get~k~i~I~IidD~i 169 (319)
..+.|.|++.+|+|.|++|.+.|+|.|+| ++.++++|+|.|.+|||.+|.||.+.+|+|+|+||+++|+|+|.|+||.+
T Consensus 8 ~~~~~~f~~~~y~V~E~~G~v~vtV~R~gG~~~~~v~V~y~T~dGTA~~g~Dy~~~~gtl~F~~Get~kti~V~IidD~~ 87 (295)
T 3us9_A 8 HVSKIFFEQGTYQCLENCGTVALTIIRRGGDLTNTVFVDFRTEDGTANAGSDYEFTEGTVVFKPGETQKEIRVGIIDDDI 87 (295)
T ss_dssp --CEEEESCSEEEEEGGGSCEEEEEEEEESSCCSCEEEEEEEEESSSCBTTTBCCCCEEEEECSSCCEEEEEECCCCCSS
T ss_pred ceeeEEecCCeEEEecCceEEEEEEEEecCCCCceEEEEEEeeCCcccCCcCccccceEEEECCCceEEEEEEEEeCCCc
Confidence 45789999999999999999999999997 68999999999999999999999999999999999999999999999999
Q ss_pred CCCceEEEEEEE-eecCC------------CCccc-ccceeeeEEEEeeCCCCceeeeeecceeecCCCceEEEeEEecC
Q psy5085 170 WDPVEEFFLRLT-LLNKS------------ADMVK-LGGLNIMEVTIIDDDDPGIIQFEKRGYLVKESSGVVAIPILRTS 235 (319)
Q Consensus 170 ~E~dE~F~v~L~-~~~~~------------~~~~~-lg~~~~a~VtI~Ddd~~g~~~F~~~~~~V~E~~g~~~v~V~R~~ 235 (319)
+|++|+|+|.|+ |.... ..+.+ ||.++.++|+|+|||++|+|+|..+.|.|.|+.|.+.++|.|++
T Consensus 88 ~E~~EtF~v~Ls~~~~~~~~~~d~~~~~~~~~~~a~Lg~~~~atVtI~DdD~agv~sf~~~~~~V~E~~G~~~v~V~Rs~ 167 (295)
T 3us9_A 88 FEEDKNFLVHLSNVKVSSEASEDGILEANHVSALACLGSPSTATVTIFDDDHAGIFTFEEPVTHVSESIGIMEVKVLRTS 167 (295)
T ss_dssp CCCCEEEEEEEECCCCCCCC-------------CCCCCSCCEEEEEEECCCCCCEEEESCSEEEEESCSSEEEEEEEEES
T ss_pred ccCceEEEEEEecCccccccccccccccccCCcccccCCCceeEEEEcccccccccccCCCeEEEecCCCeEEEEEEEEc
Confidence 999999999999 76311 12345 99999999999999999999999999999999999999999999
Q ss_pred CCCCcEEEEEEeeeccccCC-CcccccceEEEEeCCeeEEEEEEEeecCCCCCCCeEEEEEEeCC---------------
Q psy5085 236 GSDGDVSVKWKTVDKTAISS-RDYKGGSGVITFKHGEVRRVLEIPIIDDLKPEKDEYFEVKLSEP--------------- 299 (319)
Q Consensus 236 g~~g~v~V~~~t~dGTA~~G-~DY~~~~g~l~F~~get~k~i~I~IidD~~~E~dE~F~v~L~~p--------------- 299 (319)
++++.++|+|.|.+|||++| .||...+|+|+|++||++|+|+|+|+||.++|++|+|.|.|++|
T Consensus 168 ~~~g~VtV~y~T~~GTA~~g~~DY~~~sgtLtF~~Get~kti~V~IidD~~~E~dEtF~V~Ls~p~~a~lg~~~~~~~~~ 247 (295)
T 3us9_A 168 GARGNVIVPYKTIEGTARGGGEDFEDTCGELEFQNDEIVKTISVKVIDDEEYEKNKTFFLEIGEPRLVEMSEKKGGFTIT 247 (295)
T ss_dssp CCCSCEEEEEEEECCSSCTTTTSEECCEEEEEECTTCCCEEEEEEECCCSCCCSCEEEEEEECCCEECCC----------
T ss_pred CCCccEEEEEEecCCCccCCcccccccceEEEecCCceEEEEEEEEcCCCCcCCceEEEEEEeCCcccccccccccceee
Confidence 99999999999999999999 99999999999999999999999999999999999999999998
Q ss_pred ---------------------CCCeeeeccceEEEEEeCCC
Q psy5085 300 ---------------------TGGAKIGVVNHCAVTITNDD 319 (319)
Q Consensus 300 ---------------------~g~~~lG~~~~~~VtI~ddd 319 (319)
.|+|+||++++++|+|.+|+
T Consensus 248 ~~~~~~~~~~~~~~~~~~i~~~g~p~lge~~~~~v~i~es~ 288 (295)
T 3us9_A 248 EEYDDKQPLTSKEEEERRIAEMGRPILGEHTKLEVIIEESY 288 (295)
T ss_dssp ---------CHHHHHHHHHHTTSSCEECSCCEEEEEEECCC
T ss_pred cccccccccccchhhhhhhhhcCCCccCCceEEEEEEEECH
Confidence 27899999999999999986
No 3
>3ead_A Na/Ca exchange protein; CBD1, calcium regulation, membrane, transmembrane, membrane; 2.25A {Drosophila melanogaster} SCOP: b.1.27.0
Probab=100.00 E-value=5.3e-33 Score=232.20 Aligned_cols=134 Identities=27% Similarity=0.430 Sum_probs=105.6
Q ss_pred CCeeEEEEEeeeEEEecCCeEEEEEEEEeCCCCceEEEEEEEeCCCccCCCCeeeeceEEEEeCCceEEEEEEEEecCCC
Q psy5085 90 TNYAIIEFHAVTVAVREDIGSFKVGILRHGNLQNIARVRVDSIDGSAKQGKRYQKVNQTVVFKENETEKFVTIRIINDEK 169 (319)
Q Consensus 90 ~~~~~i~F~~~~y~V~E~~g~v~vtV~R~g~~~~~vtV~~~t~dGTA~~g~Dy~~~~gtl~F~~Get~k~i~I~IidD~i 169 (319)
++++.|+|+++.|+|.|++|.+.|+|.|+|+..++++|+|.|.+|||.+|.||.+.+|+|+|+||+++|+|+|.|+||.+
T Consensus 2 d~~~~i~F~~~~y~V~E~~g~~~v~V~R~g~~~~~v~V~y~t~~gTA~~g~Dy~~~~g~l~F~~Get~k~i~V~I~dD~~ 81 (137)
T 3ead_A 2 DDPIRMYFEPGHYTVMENCGEFEVRVVRRGDISTYASVEYETQDGTASAGTDFVGRKGLLSFPPGVDEQRFRIEVIDDDV 81 (137)
T ss_dssp ---CEEEESSCEEEEEGGGCEEEEEEEEESCCSSCEEEEEEEECSSSCBTTTBCCCEEEEEECTTCCEEEEEEEBCCCSS
T ss_pred CCCEEEEEcCCEEEEECCCeEEEEEEEEECCCCceEEEEEEeECCCcCCCCcEeEeeEEEEECCCceEEEEEEEEecCCc
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceEEEEEEE-eecCCCCcccccceeeeEEEEeeCCCCceeeeeecceeecCCCceE
Q psy5085 170 WDPVEEFFLRLT-LLNKSADMVKLGGLNIMEVTIIDDDDPGIIQFEKRGYLVKESSGVV 227 (319)
Q Consensus 170 ~E~dE~F~v~L~-~~~~~~~~~~lg~~~~a~VtI~Ddd~~g~~~F~~~~~~V~E~~g~~ 227 (319)
+|++|+|+|.|+ |..++. ||.++.++|+|+|||++|+|+|..+.|.|.|+.|.+
T Consensus 82 ~E~~E~F~v~L~~p~~~a~----lg~~~~atvtI~ddD~~g~~~f~~~~~~V~E~~G~~ 136 (137)
T 3ead_A 82 FEEDECFYIRLFNPSEGVK----LAVPMIATVMILDDDHAGIFAFTDSVFEITESVGRF 136 (137)
T ss_dssp CCCCEEEEEEEECCCTTCE----ECSCSEEEEEEECCC---------------------
T ss_pred ccCcEEEEEEEECCCCCcE----ECCCcEEEEEEECCCCCCEEEECCCcEEEeccccEE
Confidence 999999999999 744433 999999999999999999999999999999999875
No 4
>3gin_A Sodium/calcium exchanger 1; CBD1, CBD2, NCX, calcium binding domain 1, antiport, calcium transport, calmodulin-binding, cell membrane; 2.40A {Canis lupus familiaris} PDB: 2dpk_A* 2fws_A
Probab=99.97 E-value=1.1e-30 Score=223.12 Aligned_cols=129 Identities=32% Similarity=0.497 Sum_probs=107.7
Q ss_pred CCCCCeeEEEEEeeeEEEecCCeEEEEEEEEe-CCCCceEEEEEEEeCCCccCCCCeeeeceEEEEeCCceEEEEEEEEe
Q psy5085 87 ETKTNYAIIEFHAVTVAVREDIGSFKVGILRH-GNLQNIARVRVDSIDGSAKQGKRYQKVNQTVVFKENETEKFVTIRII 165 (319)
Q Consensus 87 ~~d~~~~~i~F~~~~y~V~E~~g~v~vtV~R~-g~~~~~vtV~~~t~dGTA~~g~Dy~~~~gtl~F~~Get~k~i~I~Ii 165 (319)
.+|++.+.|+|+++.|+|.|++|.+.|+|.|+ |.+.++++|+|.|.+|||.+|.||.+.+|+|+|+|||++|+|+|+|+
T Consensus 17 ~ddd~~g~i~F~~~~y~V~E~~G~v~vtV~R~~G~~~~~v~V~y~T~dGTA~~g~Dy~~~~gtl~F~~Get~k~i~V~Ii 96 (160)
T 3gin_A 17 QGPGPVSKIFFEQGTYQCLENCGTVALTIIRRGGDLTNTVFVDFRTEDGTANAGSDYEFTEGTVVFKPGETQKEIRVGII 96 (160)
T ss_dssp ----CEEEEEESCSEEEEETTSSEEEEEEEEESSCTTSCEEEEEEEEESSSCBTTTBCCCEEEEEECTTCCEEEEEEEBC
T ss_pred ecCCCccEEEEeCCEEEEEcCcEEEEEEEEEccCCCCcEEEEEEEEECCcccCCCCccccceEEEEcCCcEEEEEEEEEE
Confidence 46678999999999999999999999999999 55689999999999999999999999999999999999999999999
Q ss_pred cCCCCCCceEEEEEEE-eecC------------CCCccc-ccceeeeEEEEeeCCCCceeeeee
Q psy5085 166 NDEKWDPVEEFFLRLT-LLNK------------SADMVK-LGGLNIMEVTIIDDDDPGIIQFEK 215 (319)
Q Consensus 166 dD~i~E~dE~F~v~L~-~~~~------------~~~~~~-lg~~~~a~VtI~Ddd~~g~~~F~~ 215 (319)
||.++|++|+|+|.|+ |+-. ..++.+ ||.++.++|||+|||++|+|+|++
T Consensus 97 dD~~~E~~EtF~v~Ls~p~~~~~g~~~~~~~~~~~~~~a~LG~~s~atVtI~DdD~aGi~~F~~ 160 (160)
T 3gin_A 97 DDDIFEEDKNFLVHLSNVKVSSEASEDGILEANHVSALACLGSPSTATVTIFDDDHAGIFTFEE 160 (160)
T ss_dssp CCSCCCCCEEEEEEEEEEEC----------------CEEEECSCSEEEEEEECCCC--------
T ss_pred CCCCccCceEEEEEECCCcccccccccccccccccCCCceecCCcEEEEEEEcCCCCCEEEeCC
Confidence 9999999999999999 7611 112346 999999999999999999999974
No 5
>3e9t_A Na/Ca exchange protein; CBD1, CALX, membrane, transmembrane, membrane protein; 1.60A {Drosophila melanogaster} SCOP: b.1.27.0
Probab=99.96 E-value=7.3e-29 Score=200.83 Aligned_cols=111 Identities=27% Similarity=0.430 Sum_probs=103.9
Q ss_pred eEEEEEeeeEEEecCCeEEEEEEEEeCCCCceEEEEEEEeCCCccCCCCeeeeceEEEEeCCceEEEEEEEEecCCCCCC
Q psy5085 93 AIIEFHAVTVAVREDIGSFKVGILRHGNLQNIARVRVDSIDGSAKQGKRYQKVNQTVVFKENETEKFVTIRIINDEKWDP 172 (319)
Q Consensus 93 ~~i~F~~~~y~V~E~~g~v~vtV~R~g~~~~~vtV~~~t~dGTA~~g~Dy~~~~gtl~F~~Get~k~i~I~IidD~i~E~ 172 (319)
-.|+|+++.|+|.|++|.+.|+|.|+|+..++++|+|.|.+|||.+|.||.+.+|+|+|+||+++|+|+|+|+||.++|+
T Consensus 3 i~i~F~~~~y~V~E~~g~~~v~V~R~g~~~~~v~V~y~t~~gTA~~g~Dy~~~~g~l~F~~Get~k~i~V~I~dD~~~E~ 82 (114)
T 3e9t_A 3 IRMYFEPGHYTVMENCGEFEVRVVRRGDISTYASVEYETQDGTASAGTDFVGRKGLLSFPPGVDEQRFRIEVIDDDVFEE 82 (114)
T ss_dssp EEEEESSSEEEEETTCCEEEEEEEEEECCSSCEEEEEEEECSSSCBTTTBCCCEEEEEECTTCCEEEEEEEBCCCSSCCC
T ss_pred EEEEEeCCEEEEEcCCeEEEEEEEEECCCCeeEEEEEEeECCccCCCCCceEcceEEEEeCCcEEEEEEEEEEcCCCccC
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEEEE-eecCCCCcccccceeeeEEEEeeCCC
Q psy5085 173 VEEFFLRLT-LLNKSADMVKLGGLNIMEVTIIDDDD 207 (319)
Q Consensus 173 dE~F~v~L~-~~~~~~~~~~lg~~~~a~VtI~Ddd~ 207 (319)
+|+|+|.|+ |.+++. ||.++.|+|+|+||||
T Consensus 83 ~E~F~v~L~~p~~~a~----lg~~~~atvtI~DdD~ 114 (114)
T 3e9t_A 83 DECFYIRLFNPSEGVK----LAVPMIATVMILDDDH 114 (114)
T ss_dssp CEEEEEEEECCCTTEE----ECSCCEEEEEEECC--
T ss_pred CEEEEEEEECCCCCcE----ECCCCEEEEEEECCCC
Confidence 999999999 644433 9999999999999996
No 6
>3gin_A Sodium/calcium exchanger 1; CBD1, CBD2, NCX, calcium binding domain 1, antiport, calcium transport, calmodulin-binding, cell membrane; 2.40A {Canis lupus familiaris} PDB: 2dpk_A* 2fws_A
Probab=99.96 E-value=1.2e-28 Score=210.59 Aligned_cols=123 Identities=35% Similarity=0.468 Sum_probs=108.6
Q ss_pred eeEEEEeeCCCCceeeeeecceeecCCCceEEEeEEecCCC-CCcEEEEEEeeeccccCCCcccccceEEEEeCCeeEEE
Q psy5085 197 IMEVTIIDDDDPGIIQFEKRGYLVKESSGVVAIPILRTSGS-DGDVSVKWKTVDKTAISSRDYKGGSGVITFKHGEVRRV 275 (319)
Q Consensus 197 ~a~VtI~Ddd~~g~~~F~~~~~~V~E~~g~~~v~V~R~~g~-~g~v~V~~~t~dGTA~~G~DY~~~~g~l~F~~get~k~ 275 (319)
...|+|+|||..|.|+|+.+.|.|.|++|.+.|+|.|++|. .+.++|.|.|.+|||++|.||...+|+|+|++||++|+
T Consensus 11 ~~~~~i~ddd~~g~i~F~~~~y~V~E~~G~v~vtV~R~~G~~~~~v~V~y~T~dGTA~~g~Dy~~~~gtl~F~~Get~k~ 90 (160)
T 3gin_A 11 ALEVLFQGPGPVSKIFFEQGTYQCLENCGTVALTIIRRGGDLTNTVFVDFRTEDGTANAGSDYEFTEGTVVFKPGETQKE 90 (160)
T ss_dssp ----------CEEEEEESCSEEEEETTSSEEEEEEEEESSCTTSCEEEEEEEEESSSCBTTTBCCCEEEEEECTTCCEEE
T ss_pred eEEEEEecCCCccEEEEeCCEEEEEcCcEEEEEEEEEccCCCCcEEEEEEEEECCcccCCCCccccceEEEEcCCcEEEE
Confidence 36799999999999999999999999999999999999776 79999999999999999999999999999999999999
Q ss_pred EEEEeecCCCCCCCeEEEEEEeCCC-----------------CCeeeeccceEEEEEeCCC
Q psy5085 276 LEIPIIDDLKPEKDEYFEVKLSEPT-----------------GGAKIGVVNHCAVTITNDD 319 (319)
Q Consensus 276 i~I~IidD~~~E~dE~F~v~L~~p~-----------------g~~~lG~~~~~~VtI~ddd 319 (319)
|.|+|+||.++|++|+|.|.|.+|. +++.||.++.++|||.|||
T Consensus 91 i~V~IidD~~~E~~EtF~v~Ls~p~~~~~g~~~~~~~~~~~~~~a~LG~~s~atVtI~DdD 151 (160)
T 3gin_A 91 IRVGIIDDDIFEEDKNFLVHLSNVKVSSEASEDGILEANHVSALACLGSPSTATVTIFDDD 151 (160)
T ss_dssp EEEEBCCCSCCCCCEEEEEEEEEEEC----------------CEEEECSCSEEEEEEECCC
T ss_pred EEEEEECCCCccCceEEEEEECCCcccccccccccccccccCCCceecCCcEEEEEEEcCC
Confidence 9999999999999999999999984 3589999999999999997
No 7
>3fso_A Integrin beta-4, GP150; immunoglobulin fold, cell adhesion, alternative splicing, disease mutation, epidermolysis bullosa, glycoprotein, membrane; 1.41A {Homo sapiens} SCOP: b.1.27.0 PDB: 3fq4_A 3h6a_A
Probab=99.95 E-value=4.1e-28 Score=198.95 Aligned_cols=112 Identities=19% Similarity=0.283 Sum_probs=101.7
Q ss_pred CeeEEEEEeeeEEEecCCeEEEEEEEEeCCCCceEEEEEEEeCCCccCCCCeeeeceEEEEeCCceEEEEEEEEecCCCC
Q psy5085 91 NYAIIEFHAVTVAVREDIGSFKVGILRHGNLQNIARVRVDSIDGSAKQGKRYQKVNQTVVFKENETEKFVTIRIINDEKW 170 (319)
Q Consensus 91 ~~~~i~F~~~~y~V~E~~g~v~vtV~R~g~~~~~vtV~~~t~dGTA~~g~Dy~~~~gtl~F~~Get~k~i~I~IidD~i~ 170 (319)
..|.|+|++++|+|.|++|.+.|+|.|+|+..+.++|+|.|.+|||.+|.||.+.+|+|+|+|||++|+|.|+|+||..+
T Consensus 4 a~G~i~F~~~~y~V~E~~g~~~v~V~R~gg~~g~v~V~y~T~dgTA~ag~Dy~~~~g~l~F~~Get~k~i~V~I~dD~~~ 83 (123)
T 3fso_A 4 MRDVVSFEQPEFSVSRGDQVARIPVIRRVLDGGKSQVSYRTQDGTAQGNRDYIPVEGELLFQPGEAWKELQVKLLELQEV 83 (123)
T ss_dssp CCSEEEESCSEEEEEGGGSEEEEEEEEESCCSSCEEEEEEEEESSSCBTTTBCCCEEEEEECTTCCEEEEEEEBCCC---
T ss_pred CceEEEEeCCEEEEEcCceEEEEEEEEeCCCCceEEEEEEeeCCcEeCCccccccceEEEECCCCeEEEEEEEEECCCCc
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999976
Q ss_pred CC------ceEEEEEEE-eecCCCCcccccceeeeEEEEeeCC
Q psy5085 171 DP------VEEFFLRLT-LLNKSADMVKLGGLNIMEVTIIDDD 206 (319)
Q Consensus 171 E~------dE~F~v~L~-~~~~~~~~~~lg~~~~a~VtI~Ddd 206 (319)
|. +|+|+|.|+ |.+++. ||.++.|+|+|+|||
T Consensus 84 E~~~e~~~~E~F~v~L~~p~~ga~----lg~~~~atVtI~DdD 122 (123)
T 3fso_A 84 DSLLRGRQVRRFHVQLSNPKFGAH----LGQPHSTTIIIRDPD 122 (123)
T ss_dssp ------CCEEEEEEEEEEEETTCE----ECSCSEEEEEEECC-
T ss_pred hhccccCCCeEEEEEEeCCCCCcE----ECCCCEEEEEEEcCC
Confidence 64 999999999 886554 999999999999998
No 8
>3fso_A Integrin beta-4, GP150; immunoglobulin fold, cell adhesion, alternative splicing, disease mutation, epidermolysis bullosa, glycoprotein, membrane; 1.41A {Homo sapiens} SCOP: b.1.27.0 PDB: 3fq4_A 3h6a_A
Probab=99.95 E-value=3.2e-28 Score=199.61 Aligned_cols=113 Identities=27% Similarity=0.470 Sum_probs=105.0
Q ss_pred CCceeeeeecceeecCCCceEEEeEEecCCCCCcEEEEEEeeeccccCCCcccccceEEEEeCCeeEEEEEEEeecCCCC
Q psy5085 207 DPGIIQFEKRGYLVKESSGVVAIPILRTSGSDGDVSVKWKTVDKTAISSRDYKGGSGVITFKHGEVRRVLEIPIIDDLKP 286 (319)
Q Consensus 207 ~~g~~~F~~~~~~V~E~~g~~~v~V~R~~g~~g~v~V~~~t~dGTA~~G~DY~~~~g~l~F~~get~k~i~I~IidD~~~ 286 (319)
.+|+|+|+++.|.|.|++|.+.|+|.|.++..+.++|.|.|.+|||.+|.||...+|+|+|++||++|+|.|+|+||.++
T Consensus 4 a~G~i~F~~~~y~V~E~~g~~~v~V~R~gg~~g~v~V~y~T~dgTA~ag~Dy~~~~g~l~F~~Get~k~i~V~I~dD~~~ 83 (123)
T 3fso_A 4 MRDVVSFEQPEFSVSRGDQVARIPVIRRVLDGGKSQVSYRTQDGTAQGNRDYIPVEGELLFQPGEAWKELQVKLLELQEV 83 (123)
T ss_dssp CCSEEEESCSEEEEEGGGSEEEEEEEEESCCSSCEEEEEEEEESSSCBTTTBCCCEEEEEECTTCCEEEEEEEBCCC---
T ss_pred CceEEEEeCCEEEEEcCceEEEEEEEEeCCCCceEEEEEEeeCCcEeCCccccccceEEEECCCCeEEEEEEEEECCCCc
Confidence 46999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CC------CeEEEEEEeCCCCCeeeeccceEEEEEeCCC
Q psy5085 287 EK------DEYFEVKLSEPTGGAKIGVVNHCAVTITNDD 319 (319)
Q Consensus 287 E~------dE~F~v~L~~p~g~~~lG~~~~~~VtI~ddd 319 (319)
|. +|+|.|.|.+|.+++.||.++.++|+|.|||
T Consensus 84 E~~~e~~~~E~F~v~L~~p~~ga~lg~~~~atVtI~DdD 122 (123)
T 3fso_A 84 DSLLRGRQVRRFHVQLSNPKFGAHLGQPHSTTIIIRDPD 122 (123)
T ss_dssp ------CCEEEEEEEEEEEETTCEECSCSEEEEEEECC-
T ss_pred hhccccCCCeEEEEEEeCCCCCcEECCCCEEEEEEEcCC
Confidence 86 9999999999999999999999999999997
No 9
>3e9t_A Na/Ca exchange protein; CBD1, CALX, membrane, transmembrane, membrane protein; 1.60A {Drosophila melanogaster} SCOP: b.1.27.0
Probab=99.95 E-value=1.2e-27 Score=193.61 Aligned_cols=110 Identities=32% Similarity=0.486 Sum_probs=106.9
Q ss_pred eeeeeecceeecCCCceEEEeEEecCCCCCcEEEEEEeeeccccCCCcccccceEEEEeCCeeEEEEEEEeecCCCCCCC
Q psy5085 210 IIQFEKRGYLVKESSGVVAIPILRTSGSDGDVSVKWKTVDKTAISSRDYKGGSGVITFKHGEVRRVLEIPIIDDLKPEKD 289 (319)
Q Consensus 210 ~~~F~~~~~~V~E~~g~~~v~V~R~~g~~g~v~V~~~t~dGTA~~G~DY~~~~g~l~F~~get~k~i~I~IidD~~~E~d 289 (319)
.|+|+++.|.|.|++|.+.++|.|++++.+.++|.|.|.+|||.+|.||.+.+|+|+|++||++|+|.|+|+||.++|++
T Consensus 4 ~i~F~~~~y~V~E~~g~~~v~V~R~g~~~~~v~V~y~t~~gTA~~g~Dy~~~~g~l~F~~Get~k~i~V~I~dD~~~E~~ 83 (114)
T 3e9t_A 4 RMYFEPGHYTVMENCGEFEVRVVRRGDISTYASVEYETQDGTASAGTDFVGRKGLLSFPPGVDEQRFRIEVIDDDVFEED 83 (114)
T ss_dssp EEEESSSEEEEETTCCEEEEEEEEEECCSSCEEEEEEEECSSSCBTTTBCCCEEEEEECTTCCEEEEEEEBCCCSSCCCC
T ss_pred EEEEeCCEEEEEcCCeEEEEEEEEECCCCeeEEEEEEeECCccCCCCCceEcceEEEEeCCcEEEEEEEEEEcCCCccCC
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEEeCCCCCeeeeccceEEEEEeCCC
Q psy5085 290 EYFEVKLSEPTGGAKIGVVNHCAVTITNDD 319 (319)
Q Consensus 290 E~F~v~L~~p~g~~~lG~~~~~~VtI~ddd 319 (319)
|+|.|.|.+|.+++.||.+++++|+|.|||
T Consensus 84 E~F~v~L~~p~~~a~lg~~~~atvtI~DdD 113 (114)
T 3e9t_A 84 ECFYIRLFNPSEGVKLAVPMIATVMILDDD 113 (114)
T ss_dssp EEEEEEEECCCTTEEECSCCEEEEEEECC-
T ss_pred EEEEEEEECCCCCcEECCCCEEEEEEECCC
Confidence 999999999988999999999999999997
No 10
>3ead_A Na/Ca exchange protein; CBD1, calcium regulation, membrane, transmembrane, membrane; 2.25A {Drosophila melanogaster} SCOP: b.1.27.0
Probab=99.95 E-value=7e-27 Score=195.08 Aligned_cols=114 Identities=33% Similarity=0.506 Sum_probs=108.9
Q ss_pred CCCceeeeeecceeecCCCceEEEeEEecCCCCCcEEEEEEeeeccccCCCcccccceEEEEeCCeeEEEEEEEeecCCC
Q psy5085 206 DDPGIIQFEKRGYLVKESSGVVAIPILRTSGSDGDVSVKWKTVDKTAISSRDYKGGSGVITFKHGEVRRVLEIPIIDDLK 285 (319)
Q Consensus 206 d~~g~~~F~~~~~~V~E~~g~~~v~V~R~~g~~g~v~V~~~t~dGTA~~G~DY~~~~g~l~F~~get~k~i~I~IidD~~ 285 (319)
|..+.|+|+++.|.|.|++|.+.++|.|++++.+.++|.|.|.+|||++|.||...+|+|+|++||++|+|.|+|+||.+
T Consensus 2 d~~~~i~F~~~~y~V~E~~g~~~v~V~R~g~~~~~v~V~y~t~~gTA~~g~Dy~~~~g~l~F~~Get~k~i~V~I~dD~~ 81 (137)
T 3ead_A 2 DDPIRMYFEPGHYTVMENCGEFEVRVVRRGDISTYASVEYETQDGTASAGTDFVGRKGLLSFPPGVDEQRFRIEVIDDDV 81 (137)
T ss_dssp ---CEEEESSCEEEEEGGGCEEEEEEEEESCCSSCEEEEEEEECSSSCBTTTBCCCEEEEEECTTCCEEEEEEEBCCCSS
T ss_pred CCCEEEEEcCCEEEEECCCeEEEEEEEEECCCCceEEEEEEeECCCcCCCCcEeEeeEEEEECCCceEEEEEEEEecCCc
Confidence 45689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCeEEEEEEeCCCCCeeeeccceEEEEEeCCC
Q psy5085 286 PEKDEYFEVKLSEPTGGAKIGVVNHCAVTITNDD 319 (319)
Q Consensus 286 ~E~dE~F~v~L~~p~g~~~lG~~~~~~VtI~ddd 319 (319)
+|++|+|.|.|.+|.+++.||.+++++|+|.|||
T Consensus 82 ~E~~E~F~v~L~~p~~~a~lg~~~~atvtI~ddD 115 (137)
T 3ead_A 82 FEEDECFYIRLFNPSEGVKLAVPMIATVMILDDD 115 (137)
T ss_dssp CCCCEEEEEEEECCCTTCEECSCSEEEEEEECCC
T ss_pred ccCcEEEEEEEECCCCCcEECCCcEEEEEEECCC
Confidence 9999999999999988999999999999999987
No 11
>2qvk_A CBD2, sodium/calcium exchanger 1; calcium binding domain, metal binding protein; 1.45A {Canis lupus familiaris} PDB: 2qvm_A 2fwu_A 2kls_A
Probab=99.94 E-value=3.2e-26 Score=199.65 Aligned_cols=96 Identities=33% Similarity=0.601 Sum_probs=90.9
Q ss_pred eCCCCceeeeeecceeecCCCceEEEeEEecCCCCCcEEEEEEeeeccccC-CCcccccceEEEEeCCeeEEEEEEEeec
Q psy5085 204 DDDDPGIIQFEKRGYLVKESSGVVAIPILRTSGSDGDVSVKWKTVDKTAIS-SRDYKGGSGVITFKHGEVRRVLEIPIID 282 (319)
Q Consensus 204 Ddd~~g~~~F~~~~~~V~E~~g~~~v~V~R~~g~~g~v~V~~~t~dGTA~~-G~DY~~~~g~l~F~~get~k~i~I~Iid 282 (319)
.||++|+|+|+.+.|.|.|++|.+.|+|.|++|+.+.|+|.|.|.+|||++ |.||.+.+|+|+|++||++|+|.|+|+|
T Consensus 1 ~DD~~Gv~sF~~~~y~V~E~~G~v~vtV~R~gg~~g~VsV~y~T~dGTA~agG~DY~~~sGtL~F~~GEt~KtI~I~Iid 80 (192)
T 2qvk_A 1 GPGHAGIFTFEEPVTHVSESIGIMEVKVLRTSGARGNVIVPYKTIEGTARGGGEDFEDTCGELEFQNDEIVKTISVKVID 80 (192)
T ss_dssp ---CCCEEEESCSEEEEETTCCEEEEEEEEESCCCSCEEEEEEEEESSSCTTTTSBCCCEEEEEECTTCCEEEEEEEBCC
T ss_pred CCCCceEEEEcCCeEEEEcCceEEEEEEEEeCCCCceEEEEEEeeCCceeccCcCccccceEEEECCCCeEEEEEEEEeC
Confidence 377899999999999999999999999999999999999999999999999 8999999999999999999999999999
Q ss_pred CCCCCCCeEEEEEEeCC
Q psy5085 283 DLKPEKDEYFEVKLSEP 299 (319)
Q Consensus 283 D~~~E~dE~F~v~L~~p 299 (319)
|.++|++|+|+|.|.+|
T Consensus 81 D~~~E~dEtF~V~Lsnp 97 (192)
T 2qvk_A 81 DEEYEKNKTFFLEIGEP 97 (192)
T ss_dssp CSSCCSSEEEEEEECCC
T ss_pred CCcccCcEEEEEEEeCC
Confidence 99999999999999754
No 12
>2lt9_A Protein SLC8A3; NCX, NCX3, NACA exchanger, CBD, CBD2, calcium binding domain binding protein; NMR {Mus musculus}
Probab=99.90 E-value=1e-28 Score=209.25 Aligned_cols=113 Identities=34% Similarity=0.540 Sum_probs=110.4
Q ss_pred CCceeeeeecceeecCCCceEEEeEEecCCCCCcEEEEEEeeeccccC-CCcccccceEEEEeCCeeEEEEEEEeecCCC
Q psy5085 207 DPGIIQFEKRGYLVKESSGVVAIPILRTSGSDGDVSVKWKTVDKTAIS-SRDYKGGSGVITFKHGEVRRVLEIPIIDDLK 285 (319)
Q Consensus 207 ~~g~~~F~~~~~~V~E~~g~~~v~V~R~~g~~g~v~V~~~t~dGTA~~-G~DY~~~~g~l~F~~get~k~i~I~IidD~~ 285 (319)
|+|+|.|..+.|.|.|++|.+.++|.|++|+++.++|.|.|.+|||++ |.||.+.+|+|+|++||++|+|.|+|+||.+
T Consensus 10 ~~~~~~~~~~~y~V~E~~G~v~vtV~R~gg~~g~vsV~y~T~dGTA~a~G~DY~~~~GtL~F~~GEt~KtI~I~IidD~~ 89 (157)
T 2lt9_A 10 HAGIFTFECDTIHVSESIGVMEVKVLRTSGARGTVIVPFRTVEGTAKGGGEDFEDAYGELEFKNDETVKTIRVKIVDEEE 89 (157)
Confidence 579999999999999999999999999999999999999999999999 7999999999999999999999999999999
Q ss_pred CCCCeEEEEEEeCCC---------------------------CCeeeeccceEEEEEeCCC
Q psy5085 286 PEKDEYFEVKLSEPT---------------------------GGAKIGVVNHCAVTITNDD 319 (319)
Q Consensus 286 ~E~dE~F~v~L~~p~---------------------------g~~~lG~~~~~~VtI~ddd 319 (319)
+|++|+|+|.|++|. |+|+||++++++|+|.+||
T Consensus 90 ~E~dEtF~V~LsnP~~~~~~~~~~~~~~~~~~~~e~~~iae~G~p~LG~~~~~~V~I~es~ 150 (157)
T 2lt9_A 90 YERQENFFIALGEPKWMERGISEVTDRKLTVEEEEAKRIAEMGKPVLGEHPKLEVIIEESY 150 (157)
Confidence 999999999999998 9999999999999999986
No 13
>3rb5_A Na/Ca exchange protein; CBD12, calcium binding and regulation, metal binding protein; 2.35A {Drosophila melanogaster} PDB: 3rb7_A 3e9u_A
Probab=99.91 E-value=2.6e-24 Score=201.13 Aligned_cols=116 Identities=33% Similarity=0.504 Sum_probs=108.3
Q ss_pred eCCCCceeeeeecceeecCCCceEEEeEEecCCCCCcEEEEEEeeeccccCCCcccccceEEEEeCCeeEEEEEEEeecC
Q psy5085 204 DDDDPGIIQFEKRGYLVKESSGVVAIPILRTSGSDGDVSVKWKTVDKTAISSRDYKGGSGVITFKHGEVRRVLEIPIIDD 283 (319)
Q Consensus 204 Ddd~~g~~~F~~~~~~V~E~~g~~~v~V~R~~g~~g~v~V~~~t~dGTA~~G~DY~~~~g~l~F~~get~k~i~I~IidD 283 (319)
|||++|.|+|..+.|.|.|++|.+.++|.|++++.+.++|.|.|.+|||.+|.||.+.+|+|+|++|+++|+|.|+|+||
T Consensus 5 ddd~~g~i~F~~~~y~V~E~~g~v~vtV~R~g~~~~~vtV~y~T~~GTA~ag~Dy~~~~gtl~F~~Get~kti~V~I~dD 84 (298)
T 3rb5_A 5 EADDPIRMYFEPGHYTVMENCGEFEVRVVRRGDISTYASVEYETQDGTASAGTDFVGRKGLLSFPPGVDEQRFRIEVIDD 84 (298)
T ss_dssp ------CEEESSSEEEEETTSCCEECCEEECSCCSSCEEEEEEEEESSSCBTTTBCCCEEEEEECTTCCEECCEECBCCC
T ss_pred CCCCceEEEEeCCEEEEecCceEEEEEEEEECCCCccEEEEEEeeCCccCCCCCccccceEEEECCCceEEEEEEEEeCC
Confidence 66788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCeEEEEEEeCCCCCeeeeccceEEEEEeCCC
Q psy5085 284 LKPEKDEYFEVKLSEPTGGAKIGVVNHCAVTITNDD 319 (319)
Q Consensus 284 ~~~E~dE~F~v~L~~p~g~~~lG~~~~~~VtI~ddd 319 (319)
..+|++|+|.|.|.+|.+++.||.++.++|+|.|||
T Consensus 85 ~~~E~dEtF~v~Ls~p~~~a~lg~~~~atvtI~ddD 120 (298)
T 3rb5_A 85 DVFEEDECFYIRLFNPSEGVKLAVPMIATVMILDDD 120 (298)
T ss_dssp SSCCCCEEEEEEEECCCTTCCBCSCSEEEEEEECCC
T ss_pred CCccCcEEEEEEEeCCCCCcEECCCceEEEEEeccc
Confidence 999999999999999998999999999999999987
No 14
>2qvk_A CBD2, sodium/calcium exchanger 1; calcium binding domain, metal binding protein; 1.45A {Canis lupus familiaris} PDB: 2qvm_A 2fwu_A 2kls_A
Probab=99.90 E-value=1.2e-23 Score=183.52 Aligned_cols=96 Identities=24% Similarity=0.457 Sum_probs=91.6
Q ss_pred CCCeeEEEEEeeeEEEecCCeEEEEEEEEeCCCCceEEEEEEEeCCCccC-CCCeeeeceEEEEeCCceEEEEEEEEecC
Q psy5085 89 KTNYAIIEFHAVTVAVREDIGSFKVGILRHGNLQNIARVRVDSIDGSAKQ-GKRYQKVNQTVVFKENETEKFVTIRIIND 167 (319)
Q Consensus 89 d~~~~~i~F~~~~y~V~E~~g~v~vtV~R~g~~~~~vtV~~~t~dGTA~~-g~Dy~~~~gtl~F~~Get~k~i~I~IidD 167 (319)
|++.|.|+|++++|+|.|++|.+.|+|.|+|+..++++|+|.|.||||.+ |.||.+.+|+|+|+|||++|+|+|+|+||
T Consensus 2 DD~~Gv~sF~~~~y~V~E~~G~v~vtV~R~gg~~g~VsV~y~T~dGTA~agG~DY~~~sGtL~F~~GEt~KtI~I~IidD 81 (192)
T 2qvk_A 2 PGHAGIFTFEEPVTHVSESIGIMEVKVLRTSGARGNVIVPYKTIEGTARGGGEDFEDTCGELEFQNDEIVKTISVKVIDD 81 (192)
T ss_dssp --CCCEEEESCSEEEEETTCCEEEEEEEEESCCCSCEEEEEEEEESSSCTTTTSBCCCEEEEEECTTCCEEEEEEEBCCC
T ss_pred CCCceEEEEcCCeEEEEcCceEEEEEEEEeCCCCceEEEEEEeeCCceeccCcCccccceEEEECCCCeEEEEEEEEeCC
Confidence 57889999999999999999999999999999999999999999999999 89999999999999999999999999999
Q ss_pred CCCCCceEEEEEEE-eec
Q psy5085 168 EKWDPVEEFFLRLT-LLN 184 (319)
Q Consensus 168 ~i~E~dE~F~v~L~-~~~ 184 (319)
+++|++|+|+|.|+ |..
T Consensus 82 ~~~E~dEtF~V~Lsnp~~ 99 (192)
T 2qvk_A 82 EEYEKNKTFFLEIGEPRL 99 (192)
T ss_dssp SSCCSSEEEEEEECCCEE
T ss_pred CcccCcEEEEEEEeCCcc
Confidence 99999999999999 654
No 15
>2lt9_A Protein SLC8A3; NCX, NCX3, NACA exchanger, CBD, CBD2, calcium binding domain binding protein; NMR {Mus musculus}
Probab=99.82 E-value=4.2e-25 Score=187.13 Aligned_cols=118 Identities=26% Similarity=0.436 Sum_probs=106.4
Q ss_pred CCeeEEEEEeeeEEEecCCeEEEEEEEEeCCCCceEEEEEEEeCCCccC-CCCeeeeceEEEEeCCceEEEEEEEEecCC
Q psy5085 90 TNYAIIEFHAVTVAVREDIGSFKVGILRHGNLQNIARVRVDSIDGSAKQ-GKRYQKVNQTVVFKENETEKFVTIRIINDE 168 (319)
Q Consensus 90 ~~~~~i~F~~~~y~V~E~~g~v~vtV~R~g~~~~~vtV~~~t~dGTA~~-g~Dy~~~~gtl~F~~Get~k~i~I~IidD~ 168 (319)
-..|.+.|+.+.|+|.|++|.+.|+|.|+|+..++++|+|.|.||||.+ |.||.+.+|+|+|+|||++|+|.|+|+||.
T Consensus 9 ~~~~~~~~~~~~y~V~E~~G~v~vtV~R~gg~~g~vsV~y~T~dGTA~a~G~DY~~~~GtL~F~~GEt~KtI~I~IidD~ 88 (157)
T 2lt9_A 9 HHAGIFTFECDTIHVSESIGVMEVKVLRTSGARGTVIVPFRTVEGTAKGGGEDFEDAYGELEFKNDETVKTIRVKIVDEE 88 (157)
Confidence 3468899999999999999999999999999999999999999999999 799999999999999999999999999999
Q ss_pred CCCCceEEEEEEE-eecC----------------------CCCccc-ccceeeeEEEEeeCCC
Q psy5085 169 KWDPVEEFFLRLT-LLNK----------------------SADMVK-LGGLNIMEVTIIDDDD 207 (319)
Q Consensus 169 i~E~dE~F~v~L~-~~~~----------------------~~~~~~-lg~~~~a~VtI~Ddd~ 207 (319)
++|++|+|+|.|+ |.-. +...++ ||....+.|+|..++.
T Consensus 89 ~~E~dEtF~V~LsnP~~~~~~~~~~~~~~~~~~~~e~~~iae~G~p~LG~~~~~~V~I~es~e 151 (157)
T 2lt9_A 89 EYERQENFFIALGEPKWMERGISEVTDRKLTVEEEEAKRIAEMGKPVLGEHPKLEVIIEESYE 151 (157)
Confidence 9999999999999 7711 001345 8988899999988774
No 16
>3us9_A Sodium/calcium exchanger 1; beta-sandwich, calcium binding protein, intracellular, metal protein; 2.68A {Canis lupus familiaris} PDB: 2klt_A
Probab=99.86 E-value=1.1e-21 Score=182.81 Aligned_cols=113 Identities=36% Similarity=0.475 Sum_probs=105.8
Q ss_pred CCceeeeeecceeecCCCceEEEeEEecCC-CCCcEEEEEEeeeccccCCCcccccceEEEEeCCeeEEEEEEEeecCCC
Q psy5085 207 DPGIIQFEKRGYLVKESSGVVAIPILRTSG-SDGDVSVKWKTVDKTAISSRDYKGGSGVITFKHGEVRRVLEIPIIDDLK 285 (319)
Q Consensus 207 ~~g~~~F~~~~~~V~E~~g~~~v~V~R~~g-~~g~v~V~~~t~dGTA~~G~DY~~~~g~l~F~~get~k~i~I~IidD~~ 285 (319)
|...+-|+++.|.|.|++|.+.|+|.|++| +.+.++|.|.|.+|||.+|.||...+|+|+|++||++|+|+|+|+||.+
T Consensus 8 ~~~~~~f~~~~y~V~E~~G~v~vtV~R~gG~~~~~v~V~y~T~dGTA~~g~Dy~~~~gtl~F~~Get~kti~V~IidD~~ 87 (295)
T 3us9_A 8 HVSKIFFEQGTYQCLENCGTVALTIIRRGGDLTNTVFVDFRTEDGTANAGSDYEFTEGTVVFKPGETQKEIRVGIIDDDI 87 (295)
T ss_dssp --CEEEESCSEEEEEGGGSCEEEEEEEEESSCCSCEEEEEEEEESSSCBTTTBCCCCEEEEECSSCCEEEEEECCCCCSS
T ss_pred ceeeEEecCCeEEEecCceEEEEEEEEecCCCCceEEEEEEeeCCcccCCcCccccceEEEECCCceEEEEEEEEeCCCc
Confidence 346788999999999999999999999996 6899999999999999999999999999999999999999999999999
Q ss_pred CCCCeEEEEEEeCCCC-----------------CeeeeccceEEEEEeCCC
Q psy5085 286 PEKDEYFEVKLSEPTG-----------------GAKIGVVNHCAVTITNDD 319 (319)
Q Consensus 286 ~E~dE~F~v~L~~p~g-----------------~~~lG~~~~~~VtI~ddd 319 (319)
+|++|+|.|.|.+|.+ ++.||.++.++|+|.|||
T Consensus 88 ~E~~EtF~v~Ls~~~~~~~~~~d~~~~~~~~~~~a~Lg~~~~atVtI~DdD 138 (295)
T 3us9_A 88 FEEDKNFLVHLSNVKVSSEASEDGILEANHVSALACLGSPSTATVTIFDDD 138 (295)
T ss_dssp CCCCEEEEEEEECCCCCCCC-------------CCCCCSCCEEEEEEECCC
T ss_pred ccCceEEEEEEecCccccccccccccccccCCcccccCCCceeEEEEcccc
Confidence 9999999999999862 678999999999999987
No 17
>3ubf_A Neural-cadherin; cell adhesion; 2.50A {Drosophila melanogaster} PDB: 3ubg_A
Probab=95.26 E-value=0.88 Score=41.65 Aligned_cols=129 Identities=9% Similarity=0.088 Sum_probs=69.0
Q ss_pred eEEEecCC--eEEEEEEEEe-CCCCceEEEEEEEeCCCccCCCCeee--eceEEEEeCCceEEEEEEEEecCCCCCCceE
Q psy5085 101 TVAVREDI--GSFKVGILRH-GNLQNIARVRVDSIDGSAKQGKRYQK--VNQTVVFKENETEKFVTIRIINDEKWDPVEE 175 (319)
Q Consensus 101 ~y~V~E~~--g~v~vtV~R~-g~~~~~vtV~~~t~dGTA~~g~Dy~~--~~gtl~F~~Get~k~i~I~IidD~i~E~dE~ 175 (319)
...|.|+. |+.-.+|.-. .+.... +.|....|.. ..-|.- ..|.|.... ---+|....
T Consensus 114 ~~~v~En~~~gt~v~~v~A~D~D~g~n--i~Y~i~~~~~--~~~F~Id~~tG~i~~~~-------------~lD~e~~~~ 176 (316)
T 3ubf_A 114 QAVVQLNAPPNTPVFTLQARDPDTDHN--IHYFIVRDRT--GGRFEVDERSGVVRTRG-------------TDLFQLDME 176 (316)
T ss_dssp EEEECTTCCTTCEEEECCEECSSTTCC--EEEEEEEEES--SSCEEECTTTCEEEECS-------------SCCCCTTCE
T ss_pred EEEEeCCCCCCCEEEEEEEECCCCCCc--eEEEEEeCCC--CCEEEEECCccEEEECC-------------cCCcccCcE
Confidence 34688984 5654555444 333333 6676654321 123332 244443332 122566667
Q ss_pred EEEEEEeecCC-CCccc-ccceeeeEEEEeeCCCCceeeeeecceeecCCC--ceEEEeEEecCCCCCcEEEEEEee
Q psy5085 176 FFLRLTLLNKS-ADMVK-LGGLNIMEVTIIDDDDPGIIQFEKRGYLVKESS--GVVAIPILRTSGSDGDVSVKWKTV 248 (319)
Q Consensus 176 F~v~L~~~~~~-~~~~~-lg~~~~a~VtI~Ddd~~g~~~F~~~~~~V~E~~--g~~~v~V~R~~g~~g~v~V~~~t~ 248 (319)
|.|.+.+..+. ..+.. +-....++|+|.|+|+++.|.-..-...|.|+. |+..+.|.-...-.+. |.|+..
T Consensus 177 y~l~V~A~D~g~~~~~~~~~~~~~v~I~V~dnDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~Dn~~--i~Y~i~ 251 (316)
T 3ubf_A 177 YVLYVKAEDQNGKVDDRRFQSTPEERLSIVGGKRAPQFYMPSYEAEIPENQKKDSDIISIKAKSFADRE--IRYTLK 251 (316)
T ss_dssp EEEEEEEEESCC-------CBCCCEEEEEEESCCCCEESSSSEEEEEETTCCTTCEEEECCEECTTCCC--EEEEEE
T ss_pred EEEEEEEEeCCCCCCCccccceEEEEEEEEcCCCCCEEcCCCceEEEeCCCCCCCEEEEEEEEeCCCCE--EEEEEE
Confidence 87777733321 10001 233356788889999998877665567889985 5665555544433333 566654
No 18
>3qrb_A Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus musculus} PDB: 1ff5_A 3lng_A 2qvf_B 1edh_A 3lne_A 1q1p_A 3lni_A 3q2l_A* 3q2n_A* 3lnh_A 3lnf_A 2o72_A 1suh_A
Probab=93.79 E-value=2 Score=36.83 Aligned_cols=191 Identities=13% Similarity=0.156 Sum_probs=94.0
Q ss_pred EeeeEEEecCCe----EEEEEEEEeCCCCceEEEEEEEeCCCccC-CC-Ceeee--ceEEEEeCCceEEEEEEEEecCCC
Q psy5085 98 HAVTVAVREDIG----SFKVGILRHGNLQNIARVRVDSIDGSAKQ-GK-RYQKV--NQTVVFKENETEKFVTIRIINDEK 169 (319)
Q Consensus 98 ~~~~y~V~E~~g----~v~vtV~R~g~~~~~vtV~~~t~dGTA~~-g~-Dy~~~--~gtl~F~~Get~k~i~I~IidD~i 169 (319)
-...++|.||.- ..-..|.- +......|.|....+.+.. .. -|.-. .|.|... .---
T Consensus 3 v~~~~~V~En~~~~~~~~v~~v~a--D~d~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~-------------~~LD 67 (213)
T 3qrb_A 3 VIAAISCPENEKGEFPKNLVQIKS--NRDKETKVFYSITGQGADKPPVGVFIIERETGWLKVT-------------QPLD 67 (213)
T ss_dssp CEEEEEEETTCCSSSSEEEEECCC--GGGGTSCEEEEEESBTTTBSSTTSEEECTTTCEEEEC-------------SCCC
T ss_pred ccCCEEEeCCCCCCCCcEEEEEEE--CCCCCceEEEEEEcCCCCCCCCCeEEEECCCCEEEEC-------------CccC
Confidence 345788999863 22223322 3333445777766544321 11 23221 2433322 2222
Q ss_pred CCCceEEEEEEEeecCCCCcccccceeeeEEEEee-CCCCceeeeeecceeecCCC--ceEEEeEEecCCCCC----cEE
Q psy5085 170 WDPVEEFFLRLTLLNKSADMVKLGGLNIMEVTIID-DDDPGIIQFEKRGYLVKESS--GVVAIPILRTSGSDG----DVS 242 (319)
Q Consensus 170 ~E~dE~F~v~L~~~~~~~~~~~lg~~~~a~VtI~D-dd~~g~~~F~~~~~~V~E~~--g~~~v~V~R~~g~~g----~v~ 242 (319)
+|....|.|.+.+..... +. +-......|+|.| +|+++.|.-..-...|.|+. |+....|.-.-.-.+ .-.
T Consensus 68 rE~~~~y~l~v~a~D~~~-~~-~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~D~~~~~~n~~ 145 (213)
T 3qrb_A 68 REAIAKYILYSHAVSSNG-EA-VEDPMEIVITVTDQNDNRPEFTQEVFEGSVAEGAVPGTSVMKVSATDADDDVNTYNAA 145 (213)
T ss_dssp TTTCSEEEEEEEEEETTS-CB-CSCCEEEEEEEECCSCCCCEESCSEEEEEEETTCCTTCEEEECCEECCSCTTTSSTTC
T ss_pred cccCceEEEEEEEEeCCC-Cc-ccceEEEEEEEEEccCCCCccCCCceEEEEECCCCCCcEEEEEEEEeCCCCCCCcCcE
Confidence 577777888887332211 11 3333567788887 56678876666677899974 555555543322111 134
Q ss_pred EEEEeeeccccC-C-Ccccc--cceEEEEeCCeeEEEEEEEeecCCCCCCCeEEEEEEeCCC-CCeeeeccceEEEEEeC
Q psy5085 243 VKWKTVDKTAIS-S-RDYKG--GSGVITFKHGEVRRVLEIPIIDDLKPEKDEYFEVKLSEPT-GGAKIGVVNHCAVTITN 317 (319)
Q Consensus 243 V~~~t~dGTA~~-G-~DY~~--~~g~l~F~~get~k~i~I~IidD~~~E~dE~F~v~L~~p~-g~~~lG~~~~~~VtI~d 317 (319)
+.|+...+.... + .-|.- .+|.|..... --.+|....|.+.+..-. |++.+....++.|+|.|
T Consensus 146 i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~------------~LD~E~~~~y~l~V~A~D~g~~~~s~t~~v~I~V~D 213 (213)
T 3qrb_A 146 IAYTIVSQDPELPHKNMFTVNRDTGVISVLTS------------GLDRESYPTYTLVVQAADLQGEGLSTTAKAVITVKD 213 (213)
T ss_dssp CEEEEEEEESCCSCSCSEEECTTTCEEEECSS------------CCCTTTCCEEEEEEEEETGGGTSCEEEEEEEEEEEC
T ss_pred EEEEEccCCCCCCcCCeEEEECCCcEEEEccC------------CCCCccCceEEEEEEEEeCCCCCceEEEEEEEEEEC
Confidence 566665544321 1 12222 3455543211 223566667776665432 34444444555555544
No 19
>2qvi_A Cadherin-2; beta barrel, strand SWAP, domain SWAP, calcium, cell adhesion, cleavage on PAIR of basic residues, glycoprotein, membrane; 3.01A {Mus musculus} SCOP: b.1.6.1 b.1.6.1 PDB: 1ncj_A
Probab=93.69 E-value=2.8 Score=36.08 Aligned_cols=191 Identities=14% Similarity=0.192 Sum_probs=94.9
Q ss_pred EeeeEEEecCCe-EEEEEEEE-eCCCCceEEEEEEEeCCCccC--CCCeeee--ceEEEEeCCceEEEEEEEEecCCCCC
Q psy5085 98 HAVTVAVREDIG-SFKVGILR-HGNLQNIARVRVDSIDGSAKQ--GKRYQKV--NQTVVFKENETEKFVTIRIINDEKWD 171 (319)
Q Consensus 98 ~~~~y~V~E~~g-~v~vtV~R-~g~~~~~vtV~~~t~dGTA~~--g~Dy~~~--~gtl~F~~Get~k~i~I~IidD~i~E 171 (319)
..+.++|.||.- ++..+|.. ..+......|.|....+.+.. ..-|.-. .|.|... .---+|
T Consensus 3 ~~~~~~V~En~~g~~~~~v~~~~~D~~~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~-------------~~LDrE 69 (215)
T 2qvi_A 3 VIPPINLPENSRGPFPQELVRIRSDRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVT-------------KPLDRE 69 (215)
T ss_dssp CCCCEEEESSCCCCSSEEEEECCCGGGGTSCEEEEEESTTSSSTTCSSEEECTTTCEEEEC-------------SCCCTT
T ss_pred ccCcEEEcCCCCCCCCEEEEEEeCCCCCCceEEEEEECCCCCCCCCCcEEEeCCccEEEEC-------------cccCcc
Confidence 345678999863 22222222 122223345778777655421 1223221 3433322 122256
Q ss_pred CceEEEEEEEeecCCCCcccccceeeeEEEEee-CCCCceeeeeecceeecCCC--ceEEEeEEecC-----CCCCcEEE
Q psy5085 172 PVEEFFLRLTLLNKSADMVKLGGLNIMEVTIID-DDDPGIIQFEKRGYLVKESS--GVVAIPILRTS-----GSDGDVSV 243 (319)
Q Consensus 172 ~dE~F~v~L~~~~~~~~~~~lg~~~~a~VtI~D-dd~~g~~~F~~~~~~V~E~~--g~~~v~V~R~~-----g~~g~v~V 243 (319)
....|.|.+....... +. +-......|+|.| +|+++.|.-..-...|.|+. |+....|.-.. |..+ .|
T Consensus 70 ~~~~y~l~v~a~D~g~-~~-~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~D~~~g~n~--~i 145 (215)
T 2qvi_A 70 LIARFHLRAHAVDING-NQ-VENPIDIVINVIDMNDNRPEFLHQVWNGSVPEGSKPGTYVMTVTAIDADDPNALNG--ML 145 (215)
T ss_dssp TCSEEEEEEEEEETTT-CC-CEEEEEEEEEEECCCCCCCBCSSSEEEEEECSSCCTTCEEEECCCBCSSCTTSTTT--CC
T ss_pred cCCeEEEEEEEEECCC-Cc-eeeeEEEEEEEeECCCCCCcccCceeEEEEeCCCCCCCEEEEEEEEeCCCCCCCCc--EE
Confidence 6678888888333221 11 3333556777777 45678776666667899985 66555554331 2223 35
Q ss_pred EEEeeeccccC-C-Ccccc--cceEEEEeCCeeEEEEEEEeecCCCCCCCeEEEEEEeCCCC-Ce---eeeccceEEEEE
Q psy5085 244 KWKTVDKTAIS-S-RDYKG--GSGVITFKHGEVRRVLEIPIIDDLKPEKDEYFEVKLSEPTG-GA---KIGVVNHCAVTI 315 (319)
Q Consensus 244 ~~~t~dGTA~~-G-~DY~~--~~g~l~F~~get~k~i~I~IidD~~~E~dE~F~v~L~~p~g-~~---~lG~~~~~~VtI 315 (319)
.|+...|.... . .-|.- .+|.|.... .--.+|....|.|.+..-.+ ++ .+-...++.|+|
T Consensus 146 ~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~------------~~LD~E~~~~y~l~V~a~D~g~~p~~~ls~t~~v~I~V 213 (215)
T 2qvi_A 146 RYRILSQAPSTPSPNMFTINNETGDIITVA------------AGLDREKVQQYTLIIQATDMEGNPTYGLSNTATAVITV 213 (215)
T ss_dssp CCEEEECSSCCSSTTCEEECTTTCEEEECS------------CCCCTTTCSEEEEEEECCTTTTCTTTSCCCEEEEEEEE
T ss_pred EEEEecCCCCCCcCCeEEEcCCCcEEEEec------------CCCCcccCCeEEEEEEEEECCCCCCCCcceEEEEEEEE
Confidence 67666554211 1 11221 234443211 12236777788887776543 33 344445555555
Q ss_pred eC
Q psy5085 316 TN 317 (319)
Q Consensus 316 ~d 317 (319)
.|
T Consensus 214 ~D 215 (215)
T 2qvi_A 214 TD 215 (215)
T ss_dssp CC
T ss_pred EC
Confidence 43
No 20
>3ubh_A Neural-cadherin; cell adhesion; 2.70A {Drosophila melanogaster}
Probab=93.50 E-value=2.2 Score=40.66 Aligned_cols=76 Identities=12% Similarity=0.131 Sum_probs=41.6
Q ss_pred CCCceEEEEEEEeecC-CC-CcccccceeeeEEEEeeCCCCceeeeeecceeecCCC--ceEEEeEEecCCCCCcEEEEE
Q psy5085 170 WDPVEEFFLRLTLLNK-SA-DMVKLGGLNIMEVTIIDDDDPGIIQFEKRGYLVKESS--GVVAIPILRTSGSDGDVSVKW 245 (319)
Q Consensus 170 ~E~dE~F~v~L~~~~~-~~-~~~~lg~~~~a~VtI~Ddd~~g~~~F~~~~~~V~E~~--g~~~v~V~R~~g~~g~v~V~~ 245 (319)
+|.+..|.|.+.+... .. .+..+-....++|+|.|+|+++.|.-..-...|.|+. |+..+.|.-..+..+. |.|
T Consensus 176 ~e~~~~y~l~V~A~D~g~~~~~~~~~~t~~v~I~V~dndn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~dn~~--i~Y 253 (419)
T 3ubh_A 176 FQLDMEYVLYVKAEDQNGKVDDRRFQSTPEERLSIVGGKRAPQFYMPSYEAEIPENQKKDSDIISIKAKSFADRE--IRY 253 (419)
T ss_dssp CCBTCEEEEEEEEEEEEEEC--CCEEECCCEEEEEEESCCCCEESSSCEEEEEETTCCTTCEEEECCEECSSCCC--CEE
T ss_pred cccccEEEEEEEEEECCCCccCcccccceEEEEEEECCCCCCceecCeeEEEecCCCCCCcEEEEEEEecCCCCc--eEE
Confidence 3555557777663321 10 0001223345788889999998776555566789985 5555555444333344 444
Q ss_pred Ee
Q psy5085 246 KT 247 (319)
Q Consensus 246 ~t 247 (319)
+.
T Consensus 254 si 255 (419)
T 3ubh_A 254 TL 255 (419)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 21
>3ppe_A Vascular endothelial cadherin; extracellular cadherin (EC) domain, beta barrel, IG-domain L domain swapped dimer interface; 2.10A {Gallus gallus}
Probab=92.51 E-value=4.4 Score=34.41 Aligned_cols=131 Identities=16% Similarity=0.212 Sum_probs=68.4
Q ss_pred CCCceEEEEEEEeecCCCCcccccceeeeEEEEee-CCCCceeeeeecceeecCCC--ceEEEeEEecCCC---CC-cEE
Q psy5085 170 WDPVEEFFLRLTLLNKSADMVKLGGLNIMEVTIID-DDDPGIIQFEKRGYLVKESS--GVVAIPILRTSGS---DG-DVS 242 (319)
Q Consensus 170 ~E~dE~F~v~L~~~~~~~~~~~lg~~~~a~VtI~D-dd~~g~~~F~~~~~~V~E~~--g~~~v~V~R~~g~---~g-~v~ 242 (319)
+|....|.|.+.+..... +..+-......|+|.| +|+++.|.-..-...|.|+. |+....|.-...- .| .-.
T Consensus 63 rE~~~~y~l~v~a~D~g~-~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~~g~n~~ 141 (203)
T 3ppe_A 63 REKKAEYELTAHIIDRRN-NRSLEPPSKFIIKVSDINDNAPIFVQKIFNGSVPEMSRLGTSVTKVTAEDADDPTVAGHAT 141 (203)
T ss_dssp TTTCCEEEEEEEEEETTT-TEECSCCEEEEEEEECCCCCCCEESCSEEEEEEETTCCTTCEEEECCEECCSCTTSSSTTC
T ss_pred ccccceEEEEEEEEECCC-CCcccceEEEEEEEcCCCCCCCCccCCccEEEEeccCCCCcEEEEEEEEcCCCcCCCCceE
Confidence 677778888887333221 1113334567888888 56688877666677889975 5555555433211 12 124
Q ss_pred EEEEeeeccccCCCcccc-cceEEEEeCCeeEEEEEEEeecCCCCCCCeEEEEEEeCCC--CCeeeeccceEEEEEeC
Q psy5085 243 VKWKTVDKTAISSRDYKG-GSGVITFKHGEVRRVLEIPIIDDLKPEKDEYFEVKLSEPT--GGAKIGVVNHCAVTITN 317 (319)
Q Consensus 243 V~~~t~dGTA~~G~DY~~-~~g~l~F~~get~k~i~I~IidD~~~E~dE~F~v~L~~p~--g~~~lG~~~~~~VtI~d 317 (319)
|.|+...|.. -|.- .+|.|.... .--.+|....|.+.+..-. |.+.+-...++.|+|.|
T Consensus 142 i~Y~i~~~~~----~F~I~~tG~i~~~~------------~~LD~E~~~~y~l~V~A~D~~G~p~~s~t~~v~I~V~D 203 (203)
T 3ppe_A 142 VTYQIIKGNE----YFTVDDSGVIFTAR------------ADLDRESQSAYEIIVKAKDALGLTGESSTATVIIRLTD 203 (203)
T ss_dssp EEEEEEESTT----TEEECTTSEEEESC------------SCCCTTTCSEEEEEEEEEETTCCCCSSSEEEEEEEEEC
T ss_pred EEEEEeCCCC----cEEEeCCeEEEECC------------cCCCcccCCEEEEEEEEEeCCCCCCCeEEEEEEEEEEC
Confidence 6776655431 1111 233332220 2223566667766665433 33444444555566554
No 22
>2a4e_A Cadherin-11; dimer, calcium binding, cell adhesion; 3.20A {Mus musculus}
Probab=92.44 E-value=4.8 Score=34.63 Aligned_cols=184 Identities=16% Similarity=0.194 Sum_probs=88.8
Q ss_pred eeEEEecCC----eEEEEEEEEe-CCCCceEEEEEEEeCCCccCCCCeeee--ceEEEEeCCceEEEEEEEEecCCCCCC
Q psy5085 100 VTVAVREDI----GSFKVGILRH-GNLQNIARVRVDSIDGSAKQGKRYQKV--NQTVVFKENETEKFVTIRIINDEKWDP 172 (319)
Q Consensus 100 ~~y~V~E~~----g~v~vtV~R~-g~~~~~vtV~~~t~dGTA~~g~Dy~~~--~gtl~F~~Get~k~i~I~IidD~i~E~ 172 (319)
..+.|.|+. |++ |..... .+.. .-.|.|....+.+ +.-|.-. .|.|... .---+|.
T Consensus 6 ~~~~v~En~~~p~~~~-v~~va~D~D~g-n~~i~Y~l~~~~~--~~~F~Id~~tG~i~~~-------------~~LDrE~ 68 (215)
T 2a4e_A 6 NQFFVIEEYTGPDPVL-VGRLHSDIDSG-DGNIKYILSGEGA--GTIFVIDDKSGNIHAT-------------KTLDREE 68 (215)
T ss_dssp CEEEEETTCCSSSCEE-EEECCCTTCCS-SSCEEEEEEETTB--TTTEEECTTTCEEEEC-------------SCCCTTT
T ss_pred eeEEEeccCCCCCCEE-EEEEEECCCCC-CCeEEEEEECCCC--CCeEEEECCceEEEEC-------------CccCCcc
Confidence 467889983 344 333233 2222 2356777654421 2234322 3444321 1122566
Q ss_pred ceEEEEEEEeecCCCCcccccceeeeEEEEeeC-CCCceeeeeecceeecCCC--ceEEEeEEecCCCC---Cc-EEEEE
Q psy5085 173 VEEFFLRLTLLNKSADMVKLGGLNIMEVTIIDD-DDPGIIQFEKRGYLVKESS--GVVAIPILRTSGSD---GD-VSVKW 245 (319)
Q Consensus 173 dE~F~v~L~~~~~~~~~~~lg~~~~a~VtI~Dd-d~~g~~~F~~~~~~V~E~~--g~~~v~V~R~~g~~---g~-v~V~~ 245 (319)
...|.|.+........+ .+-......|+|.|- |+++.|.-..-...|.|+. |+..+.|.-+-.-. |. -.|.|
T Consensus 69 ~~~y~l~v~a~D~~~~~-~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~Gt~v~~v~A~D~D~~~~G~n~~i~Y 147 (215)
T 2a4e_A 69 RAQYTLMAQAVDRDTNR-PLEPPSEFIVKVQDINDNPPEFLHEIYHANVPERSNVGTSVIQVTASDADDPTYGNSAKLVY 147 (215)
T ss_dssp CSEEEEEEEEEETTTCC-EEEEEEEEEEEEECCCCCCCEESSSSEEEEEETTCCTTCEEEECCEECSSCTTTCSSSCCEE
T ss_pred CCEEEEEEEEEECCCCC-cccccEEEEEEEeeCCCCCCCccCCceEEEEECCCCCCCEEEEEEEEECCCCCCCCceEEEE
Confidence 67788888733322100 133335577777774 5677776555566888975 66555554332111 22 24567
Q ss_pred EeeeccccCCCcccc--cceEEEEeCCeeEEEEEEEeecCCCCCCCeEEEEEEeCCCC-Ce--eeeccceEEEEEeC
Q psy5085 246 KTVDKTAISSRDYKG--GSGVITFKHGEVRRVLEIPIIDDLKPEKDEYFEVKLSEPTG-GA--KIGVVNHCAVTITN 317 (319)
Q Consensus 246 ~t~dGTA~~G~DY~~--~~g~l~F~~get~k~i~I~IidD~~~E~dE~F~v~L~~p~g-~~--~lG~~~~~~VtI~d 317 (319)
+...|.. -|.- .+|.|.... .--.+|....|.+.+.--.+ ++ .+-...++.|+|.|
T Consensus 148 ~i~~~~~----~F~Id~~tG~I~~~~------------~~LD~E~~~~y~l~V~A~D~g~~~~~~s~~~~v~I~V~D 208 (215)
T 2a4e_A 148 SILEGQP----YFSVEAQTGIIRTAL------------PNMDREAKEEYHVVIQAKDMGGHMGGLSGTTKVTITLTD 208 (215)
T ss_dssp EEEESTT----TEEECTTTCEEEECS------------SCCCSSSCSEEEEEEEEETTTTCTTCCEEEEEEEEEEEC
T ss_pred EEeCCCC----cEEEeCCccEEEEcc------------cCCCcccCCEEEEEEEEEECCCCCCCceeEEEEEEEEEE
Confidence 6655521 1221 245443321 12235666666666554332 22 23334455566654
No 23
>3ubf_A Neural-cadherin; cell adhesion; 2.50A {Drosophila melanogaster} PDB: 3ubg_A
Probab=89.34 E-value=5.1 Score=36.43 Aligned_cols=76 Identities=11% Similarity=0.179 Sum_probs=37.8
Q ss_pred ceEEEEEEE-eecCCCCcccccceeeeEEEEee-CCCCceeeeee--cceeecCCC--ceEEEeEEecCCCCCcEEEEEE
Q psy5085 173 VEEFFLRLT-LLNKSADMVKLGGLNIMEVTIID-DDDPGIIQFEK--RGYLVKESS--GVVAIPILRTSGSDGDVSVKWK 246 (319)
Q Consensus 173 dE~F~v~L~-~~~~~~~~~~lg~~~~a~VtI~D-dd~~g~~~F~~--~~~~V~E~~--g~~~v~V~R~~g~~g~v~V~~~ 246 (319)
...|.|.+. ..++. +..+-....++|+|.| +|+++.|.-.. -...|.|+. |+....|.-.-.-.|. .+.|+
T Consensus 68 ~~~~~l~v~a~d~~~--~~~~s~~~~v~I~V~DvNDn~P~F~~~~~~y~~~v~En~~~gt~v~~v~A~D~D~g~-ni~Y~ 144 (316)
T 3ubf_A 68 TIDFWVIITNMGHNA--GIKYTDNQRVIILVKDVNDEPPYFINRPLPMQAVVQLNAPPNTPVFTLQARDPDTDH-NIHYF 144 (316)
T ss_dssp EEEEEEEEEC---------CCCEEEEEEEEEECTTCCCCEECCSSSSEEEEECTTCCTTCEEEECCEECSSTTC-CEEEE
T ss_pred ceEEEEEEEEcCCCC--CCcccceEEEEEEEEECCCCCCccCCCCCCEEEEEeCCCCCCCEEEEEEEECCCCCC-ceEEE
Confidence 345666666 22221 0002333567777777 45677766443 245788875 5554444433222222 27777
Q ss_pred eeecc
Q psy5085 247 TVDKT 251 (319)
Q Consensus 247 t~dGT 251 (319)
...|.
T Consensus 145 i~~~~ 149 (316)
T 3ubf_A 145 IVRDR 149 (316)
T ss_dssp EEEEE
T ss_pred EEeCC
Confidence 66543
No 24
>3q2w_A Cadherin-2; cell adhesion, calcium binding; HET: MAN NAG; 3.20A {Mus musculus}
Probab=87.22 E-value=6.6 Score=38.77 Aligned_cols=138 Identities=13% Similarity=0.200 Sum_probs=71.5
Q ss_pred eeeEEEecCC-eEEEEEEEEe-CCCCceEEEEEEEeCCCccC-C-CCeee--eceEEEEeCCceEEEEEEEEecCCCCCC
Q psy5085 99 AVTVAVREDI-GSFKVGILRH-GNLQNIARVRVDSIDGSAKQ-G-KRYQK--VNQTVVFKENETEKFVTIRIINDEKWDP 172 (319)
Q Consensus 99 ~~~y~V~E~~-g~v~vtV~R~-g~~~~~vtV~~~t~dGTA~~-g-~Dy~~--~~gtl~F~~Get~k~i~I~IidD~i~E~ 172 (319)
...++|.||. |.+...|.+. .+......|.|....+.+.. . .-|.- ..|.|... .---+|.
T Consensus 4 ~~~~~v~En~~g~~~~~i~~~~~D~~~n~~i~Ysi~~~~~~~~~~~~F~id~~tG~l~~~-------------~~LDrE~ 70 (559)
T 3q2w_A 4 IPPINLPENSRGPFPQELVRIRSDRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVT-------------KPLDREL 70 (559)
T ss_dssp CCCEEEESSCCCCSSEEEEECCCGGGGTSCEEEEEESBTTTBSSTTSEEECTTTCEEEEC-------------SCCCTTT
T ss_pred CCcEEeeCCCCCCCCeEEEEEeeCCCCCcEEEEEEECCCCCCCCCceEEEeCCceEEEEC-------------CccCCCC
Confidence 4568899985 4443444333 33333446788776544431 1 12322 13444332 1122566
Q ss_pred ceEEEEEEEeecCCCCcccccceeeeEEEEee-CCCCceeeeeecceeecCCC--ceEEEeEEecCCCCC---cEEEEEE
Q psy5085 173 VEEFFLRLTLLNKSADMVKLGGLNIMEVTIID-DDDPGIIQFEKRGYLVKESS--GVVAIPILRTSGSDG---DVSVKWK 246 (319)
Q Consensus 173 dE~F~v~L~~~~~~~~~~~lg~~~~a~VtI~D-dd~~g~~~F~~~~~~V~E~~--g~~~v~V~R~~g~~g---~v~V~~~ 246 (319)
...|.|.+....+.. +. +-......|+|+| +|+++.|.-..-...|.|+. |+..+.|.-+-.-.+ .-.|.|+
T Consensus 71 ~~~y~l~v~a~D~g~-~~-~~~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En~~~Gt~v~~v~A~D~D~g~~~n~~v~Ys 148 (559)
T 3q2w_A 71 IARFHLRAHAVDING-NQ-VENPIDIVINVIDMNDNRPEFLHQVWNGSVPEGSKPGTYVMTVTAIDADDPNALNGMLRYR 148 (559)
T ss_dssp CSEEEEEEEEEETTS-CE-EEEEEEEEEEEECCCCCCCEESCSEEEEEEETTCCTTCEEEECCEECSSCTTSGGGCCEEE
T ss_pred CceEEEEEEEEECCC-Cc-cceeEEEEEEEEeCCCCCCccCCCeeEEEEeCCCCCCcEEEEEEEEcCCCCCCCceEEEEE
Confidence 677888887332211 11 3333456777776 45677776555566899985 665555544322221 2345666
Q ss_pred eeecc
Q psy5085 247 TVDKT 251 (319)
Q Consensus 247 t~dGT 251 (319)
...+.
T Consensus 149 i~~~~ 153 (559)
T 3q2w_A 149 ILSQA 153 (559)
T ss_dssp EEEEE
T ss_pred EecCC
Confidence 55443
No 25
>3q2v_A Cadherin-1; cell adhesion, calcium binding; HET: MAN; 3.40A {Mus musculus}
Probab=86.95 E-value=20 Score=35.09 Aligned_cols=136 Identities=13% Similarity=0.145 Sum_probs=69.7
Q ss_pred EEeeeEEEecCCe----EEEEEEEEeCCCCceEEEEEEEeCCCccC-CCC-eee--eceEEEEeCCceEEEEEEEEecCC
Q psy5085 97 FHAVTVAVREDIG----SFKVGILRHGNLQNIARVRVDSIDGSAKQ-GKR-YQK--VNQTVVFKENETEKFVTIRIINDE 168 (319)
Q Consensus 97 F~~~~y~V~E~~g----~v~vtV~R~g~~~~~vtV~~~t~dGTA~~-g~D-y~~--~~gtl~F~~Get~k~i~I~IidD~ 168 (319)
|-...++|.||.. ..-..+. . +......|.|....+.+.. ... |.- ..|.|.... -+|
T Consensus 2 w~~~~~~v~En~~~~~~~~v~~v~-a-d~d~~~~v~Ysi~~~~~~~~~~~~F~Id~~tG~l~~~~----------~LD-- 67 (550)
T 3q2v_A 2 WVIPPISCPENEKGEFPKNLVQIK-S-NRDKETKVFYSITGQGADKPPVGVFIIERETGWLKVTQ----------PLD-- 67 (550)
T ss_dssp EECCCEEEETTCCSSSSEEEEECE-E-GGGGTSCEEEEEESBTTTBSSCSSEEECTTTCEEEECS----------CCC--
T ss_pred CcCCCEEEeCCCCCCcCeEEEEEe-c-CCCCCceEEEEEECCCCCCCCCceEEEeCCceEEEECC----------ccC--
Confidence 4456788999862 2223332 2 3233345777766533321 111 221 134443321 122
Q ss_pred CCCCceEEEEEEE-eecCCCCcccccceeeeEEEEee-CCCCceeeeeecceeecCCC--ceEEEeEEecCCCCC----c
Q psy5085 169 KWDPVEEFFLRLT-LLNKSADMVKLGGLNIMEVTIID-DDDPGIIQFEKRGYLVKESS--GVVAIPILRTSGSDG----D 240 (319)
Q Consensus 169 i~E~dE~F~v~L~-~~~~~~~~~~lg~~~~a~VtI~D-dd~~g~~~F~~~~~~V~E~~--g~~~v~V~R~~g~~g----~ 240 (319)
+|....|.|.+. ...+.. .+-.+...+|+|.| +|+++.|.-..-...|.|+. |+....|.-+-.-.| .
T Consensus 68 -rE~~~~y~l~v~a~d~~~~---~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~V~E~~~~Gt~v~~v~A~D~D~g~~~~N 143 (550)
T 3q2v_A 68 -REAIAKYILYSHAVSSNGE---AVEDPMEIVITVTDQNDNRPEFTQEVFEGSVAEGAVPGTSVMKVSATDADDDVNTYN 143 (550)
T ss_dssp -TTTCSEEEEEEEEEETTSC---BCSCCEEEEEEEECCSCCCCCBSCSEEEEEEETTCCTTCEEEECCBCCCSCTTTCGG
T ss_pred -cccCCeeEEEEEEEeCCCC---cccceEEEEEEEEecCCCCCccCCCceEEEEeCCCCCCCEEEEEEEEeCCCCCCCcc
Confidence 566667777777 332211 13344567888887 45578776666677889975 555455443322122 2
Q ss_pred EEEEEEeeec
Q psy5085 241 VSVKWKTVDK 250 (319)
Q Consensus 241 v~V~~~t~dG 250 (319)
-.+.|+...+
T Consensus 144 ~~i~Ysi~~~ 153 (550)
T 3q2v_A 144 AAIAYTIVSQ 153 (550)
T ss_dssp GCCEEEEEEE
T ss_pred eEEEEEEecC
Confidence 3456655443
No 26
>3mvs_A Cadherin-23, otocadherin; adhesion, extracellular domain, cell adhesion; 1.10A {Mus musculus} PDB: 4apx_A* 2whv_A 2wcp_A* 4aq8_A 4axw_A* 4aqe_A* 4aqa_A* 2wd0_A* 2wbx_A
Probab=85.85 E-value=8.8 Score=32.59 Aligned_cols=126 Identities=13% Similarity=0.216 Sum_probs=64.5
Q ss_pred CCCceEEEEEEEeecCCCCcccccceeeeEEEEeeC-CCCceeeeeecceeecCCC--ceEEEeEEecCCCCC-cEEEEE
Q psy5085 170 WDPVEEFFLRLTLLNKSADMVKLGGLNIMEVTIIDD-DDPGIIQFEKRGYLVKESS--GVVAIPILRTSGSDG-DVSVKW 245 (319)
Q Consensus 170 ~E~dE~F~v~L~~~~~~~~~~~lg~~~~a~VtI~Dd-d~~g~~~F~~~~~~V~E~~--g~~~v~V~R~~g~~g-~v~V~~ 245 (319)
+|....|.|.+.+..+.. .. ...+.|+|.|- |+++.|.-..-...|.|+. |+....|.-.-.-.| .-.+.|
T Consensus 72 ~E~~~~y~l~v~a~D~~~----~~-~~~v~I~V~DvNDn~P~f~~~~y~~~v~E~~~~gt~v~~v~A~D~D~g~n~~v~Y 146 (210)
T 3mvs_A 72 RETKSEFTVEFSVSDHQG----VI-TRKVNIQVGDVNDNAPTFHNQPYSVRIPENTPVGTPIFIVNATDPDLGAGGSVLY 146 (210)
T ss_dssp TTTCCEEEEEEEEECSSC----EE-EEEEEEEEECCCCCCCEECSCSEEEEEETTCCTTCEEEECCEECCSSGGGGCEEE
T ss_pred CcccceEEEEEEEEeCCC----CE-EEEEEEEEEeCCCCCCcCCCceEEEEEECCCCCCCEEEEEEEEeCCCCCCceEEE
Confidence 577777888887443321 11 24566777764 4577776555567788875 555555443322211 124566
Q ss_pred EeeeccccCCCccc--ccceEEEEeCCeeEEEEEEEeecCCCCCCCeEEEEEEeCCCC--CeeeeccceEEEEEeC
Q psy5085 246 KTVDKTAISSRDYK--GGSGVITFKHGEVRRVLEIPIIDDLKPEKDEYFEVKLSEPTG--GAKIGVVNHCAVTITN 317 (319)
Q Consensus 246 ~t~dGTA~~G~DY~--~~~g~l~F~~get~k~i~I~IidD~~~E~dE~F~v~L~~p~g--~~~lG~~~~~~VtI~d 317 (319)
+..++. + -|. ..+|.|... ..-.+|....|.|.+..-.+ .+.+.....++|+|.|
T Consensus 147 ~i~~~~---~-~F~Id~~tG~i~~~-------------~~LD~E~~~~y~l~V~a~D~g~~~~~s~~~~v~I~V~D 205 (210)
T 3mvs_A 147 SFQPPS---P-FFAIDSARGIVTVI-------------QELDYEVTQAYQLTVNATDQDKTRPLSTLANLAIIITD 205 (210)
T ss_dssp EESSCC---S-SEEECTTTCEEEEC-------------SCCCTTTCSEEEEEEEEEECCSSSCCEEEEEEEEEEEC
T ss_pred EEeCCC---C-CEEEeCCcEEEEEC-------------CcCCCcccceEEEEEEEEECCCCCCCEEEEEEEEEEEc
Confidence 654321 1 121 134444322 23345666666666543322 2334445556666654
No 27
>3ubh_A Neural-cadherin; cell adhesion; 2.70A {Drosophila melanogaster}
Probab=84.07 E-value=28 Score=32.72 Aligned_cols=56 Identities=9% Similarity=0.131 Sum_probs=31.3
Q ss_pred eeeeEEEEee-CCCCceeeeee--cceeecCCC--ceEEEeEEecCCCCCcEEEEEEeeecc
Q psy5085 195 LNIMEVTIID-DDDPGIIQFEK--RGYLVKESS--GVVAIPILRTSGSDGDVSVKWKTVDKT 251 (319)
Q Consensus 195 ~~~a~VtI~D-dd~~g~~~F~~--~~~~V~E~~--g~~~v~V~R~~g~~g~v~V~~~t~dGT 251 (319)
...++|+|.| +|+++.|.-.. -...|.|+. |+....|.-.-.-.|. .+.|+...|.
T Consensus 94 ~~~v~I~V~DvNDn~P~F~~~~~~~~~~v~E~~~~gt~v~~v~A~D~D~g~-n~~y~i~~~~ 154 (419)
T 3ubh_A 94 NQRVIILVKDVNDEPPYFINRPLPMQAVVQLNAPPNTPVFTLQARDPDTDH-NIHYFIVRDR 154 (419)
T ss_dssp EEEEEEEEECCCCSCCEECCSSSSCEEEECTTCCTTCEEEECCEECSSTTC-CEEEEEEEES
T ss_pred eEEEEEEEEECCCCCCcccCCCCcEEEEEeCCCCCCCEEEEEEEECCCCCc-eeEEEEEeCC
Confidence 3567777777 45678776554 245688875 5554444433221222 2677665554
No 28
>3q2w_A Cadherin-2; cell adhesion, calcium binding; HET: MAN NAG; 3.20A {Mus musculus}
Probab=83.98 E-value=23 Score=34.78 Aligned_cols=124 Identities=12% Similarity=0.112 Sum_probs=61.7
Q ss_pred EEeeeE--EEecCC--eEEEEEEEEe-CCCC--ceEEEEEEEeCCCccCC--CCeee--eceEEEEeCCceEEEEEEEEe
Q psy5085 97 FHAVTV--AVREDI--GSFKVGILRH-GNLQ--NIARVRVDSIDGSAKQG--KRYQK--VNQTVVFKENETEKFVTIRII 165 (319)
Q Consensus 97 F~~~~y--~V~E~~--g~v~vtV~R~-g~~~--~~vtV~~~t~dGTA~~g--~Dy~~--~~gtl~F~~Get~k~i~I~Ii 165 (319)
|....| +|.|+. |+.-+.|.-. .+.. ....|.|+..++..... .-|.- ..|.|....+
T Consensus 108 F~~~~y~~~V~En~~~Gt~v~~v~A~D~D~g~~~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~----------- 176 (559)
T 3q2w_A 108 FLHQVWNGSVPEGSKPGTYVMTVTAIDADDPNALNGMLRYRILSQAPSTPSPNMFTINNETGDIITVAA----------- 176 (559)
T ss_dssp ESCSEEEEEEETTCCTTCEEEECCEECSSCTTSGGGCCEEEEEEEESCCSCTTCEEECTTTCEEEECCS-----------
T ss_pred cCCCeeEEEEeCCCCCCcEEEEEEEEcCCCCCCCceEEEEEEecCCCCCCCcceEEEeCCceEEEEEec-----------
Confidence 444544 788984 5655666544 2221 23445666544332111 12322 1343333221
Q ss_pred cCCCCCCceEEEEEEEeecCCCCccc-ccceeeeEEEEeeC-CCCceeeeeecceeecCCC-ceEEEeEE
Q psy5085 166 NDEKWDPVEEFFLRLTLLNKSADMVK-LGGLNIMEVTIIDD-DDPGIIQFEKRGYLVKESS-GVVAIPIL 232 (319)
Q Consensus 166 dD~i~E~dE~F~v~L~~~~~~~~~~~-lg~~~~a~VtI~Dd-d~~g~~~F~~~~~~V~E~~-g~~~v~V~ 232 (319)
.--+|....|.|.+.+......+.. +-....++|+|.|- |+++.|.-..-...|.|+. |.....|.
T Consensus 177 -~LD~E~~~~y~l~V~A~D~~g~p~~~~s~t~~v~I~V~DvNDn~P~f~~~~y~~~V~En~~g~~v~~v~ 245 (559)
T 3q2w_A 177 -GLDREKVQQYTLIIQATDMEGNPTYGLSNTATAVITVTDVNDNPPEFTAMTFYGEVPENRVDVIVANLT 245 (559)
T ss_dssp -CCCTTTCCEEEEEEEEEHHHHCTTTCCEEEEEEEEEEECCSCSCCEESSSEEEEEEESSCSSEEEEEEE
T ss_pred -cCCcccCCEEEEEEEEEECCCCCCCCccceEEEEEEEEeCCCCCCccccccceeEecCCCCCcEEEEEE
Confidence 1126777788888874332111111 33335677777774 5578776665566788874 44433443
No 29
>3k5r_A Cadherin 13; mouse, structural protein; 2.00A {Mus musculus} PDB: 3k5s_A
Probab=83.66 E-value=19 Score=30.52 Aligned_cols=81 Identities=20% Similarity=0.259 Sum_probs=46.5
Q ss_pred CCCceEEEEEEEeecCCCCcccccceeeeEEEEee-CCCCceeeeeecceeecCCC--ceEEEeEEecCCCC--C-cEEE
Q psy5085 170 WDPVEEFFLRLTLLNKSADMVKLGGLNIMEVTIID-DDDPGIIQFEKRGYLVKESS--GVVAIPILRTSGSD--G-DVSV 243 (319)
Q Consensus 170 ~E~dE~F~v~L~~~~~~~~~~~lg~~~~a~VtI~D-dd~~g~~~F~~~~~~V~E~~--g~~~v~V~R~~g~~--g-~v~V 243 (319)
+|....|.|.+.+..... +. +-....+.|+|.| +|+++.|.-..-...|.|+. |+....|.-...-. | .-.|
T Consensus 68 rE~~~~y~l~v~a~D~g~-~~-~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~g~n~~i 145 (218)
T 3k5r_A 68 RETIATYQLYVETTDASG-KT-LEGPVPLEVIVIDQNDNRPIFREGPYIGHVMEGSPTGTTVMRMTAFDADDPATDNALL 145 (218)
T ss_dssp TTTCSEEEEEEEEECSSS-CE-EEEEEEEEEEEECTTCCCCCCCSCSEEEEEETTCCTTCEEEECCCSCSSSSCGGGGCE
T ss_pred cccCCEEEEEEEEEECCC-Cc-eeeeEEEEEEEEeCCCCCCcccCCceEEEEECCCCCCCEEEEEEEEeCCCCCCCCcEE
Confidence 577778888888443221 11 3333557777777 45678776666667889975 55555544332111 1 2456
Q ss_pred EEEeeeccc
Q psy5085 244 KWKTVDKTA 252 (319)
Q Consensus 244 ~~~t~dGTA 252 (319)
.|+...+..
T Consensus 146 ~Y~i~~~~~ 154 (218)
T 3k5r_A 146 RYNIRQQTP 154 (218)
T ss_dssp EEEEEEEES
T ss_pred EEEEecCCC
Confidence 677665543
No 30
>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A*
Probab=83.04 E-value=14 Score=38.81 Aligned_cols=62 Identities=11% Similarity=0.185 Sum_probs=38.3
Q ss_pred CCCceEEEEEEEeecCCCCcccccceeeeEEEEee-CCCCceeeeeecceeecCCC--ceEEEeEEe
Q psy5085 170 WDPVEEFFLRLTLLNKSADMVKLGGLNIMEVTIID-DDDPGIIQFEKRGYLVKESS--GVVAIPILR 233 (319)
Q Consensus 170 ~E~dE~F~v~L~~~~~~~~~~~lg~~~~a~VtI~D-dd~~g~~~F~~~~~~V~E~~--g~~~v~V~R 233 (319)
+|....|.|.+....... + .+-.....+|+|.| +|+++.|.-..-...|.|+. |+....|.-
T Consensus 223 rE~~~~y~l~v~A~D~g~-~-~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En~~~Gt~V~~v~A 287 (880)
T 1q55_A 223 REEYDKYVLSSHAVSENG-S-PVEEPMEITINVIDQNDNRPKFTQDVFRGSVREGVQPGTQVMAVSA 287 (880)
T ss_dssp TTTCCEEEEEEEEEESSS-C-BCSCCEEEEEEEECCSCCCCEESSSCEEEEEETTCCSSEEEEECCE
T ss_pred ccccCccEEEEEEEECCC-C-ceeeeEEEEEEEEecCCCCCCccCCcEEEEEeCCCCCCceeEEEEE
Confidence 577778888887332211 1 13344567888887 45678776555567889985 665555543
No 31
>1l3w_A EP-cadherin, C-cadherin; cell adhesion, calcium binding, extracellular, ECT metal binding protein; HET: NAG NDG; 3.08A {Xenopus laevis} SCOP: b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1
Probab=82.20 E-value=10 Score=37.31 Aligned_cols=121 Identities=13% Similarity=0.126 Sum_probs=61.6
Q ss_pred EEeee--EEEecCC--eEEEEEEEEe-CCCC---ceEEEEEEEeCCCcc--CCCCeee--eceEEEEeCCceEEEEEEEE
Q psy5085 97 FHAVT--VAVREDI--GSFKVGILRH-GNLQ---NIARVRVDSIDGSAK--QGKRYQK--VNQTVVFKENETEKFVTIRI 164 (319)
Q Consensus 97 F~~~~--y~V~E~~--g~v~vtV~R~-g~~~---~~vtV~~~t~dGTA~--~g~Dy~~--~~gtl~F~~Get~k~i~I~I 164 (319)
|.... .+|.|+. |+.-+.|.-. .+.. ....|.|+..++... ...-|.- ..|.|.... ..
T Consensus 114 F~~~~y~~~V~En~~~gt~v~~v~A~D~D~g~~~~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~---------~~ 184 (546)
T 1l3w_A 114 FTQDVFRGSVREGVQPGTQVMAVSATDEDDNIDSLNGVLSYSILKQDPEEPIPNLFTINRETGVISLIG---------TG 184 (546)
T ss_dssp ESSSCEEEEEETTCCSSEEEEECCEECCSCCSSSSTTCCEEEEEEESSCCSCSCSEEECTTTCEEEECS---------CC
T ss_pred ecCceeEEEEECCCCCCCEEEEEEEEcCCCCCCCCCCEEEEEEeCCCCCcccCCcEEEeCCCceEEEec---------cC
Confidence 55554 4789985 6665565544 2222 123456665554421 1122322 134443211 01
Q ss_pred ecCCCCCCceEEEEEEEeecCCCCcccccceeeeEEEEeeC-CCCceeeeeecceeecCC-CceEEEeE
Q psy5085 165 INDEKWDPVEEFFLRLTLLNKSADMVKLGGLNIMEVTIIDD-DDPGIIQFEKRGYLVKES-SGVVAIPI 231 (319)
Q Consensus 165 idD~i~E~dE~F~v~L~~~~~~~~~~~lg~~~~a~VtI~Dd-d~~g~~~F~~~~~~V~E~-~g~~~v~V 231 (319)
+| +|....|.|.+.+..... + .+-....++|+|.|- |+++.|.-..-...|.|+ .|+....|
T Consensus 185 LD---~E~~~~y~l~V~A~D~g~-~-~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En~~gt~v~~v 248 (546)
T 1l3w_A 185 LD---REKFPEYTLTVQATDLEG-A-GLSVEGKAIIQITDANDNAPIFDPKTYTALVPENEIGFEVQRL 248 (546)
T ss_dssp CC---TTTCCEEEEEEEEEHHHH-T-SCEEECCEEEEEECCCCCCCCBSCSEEEEEEESSSCCCEEEEE
T ss_pred CC---cccCceEEEEEEEEECCC-C-CcceEEEEEEEEeecCCCCCccccccceEEEEeCCCCCEEEEE
Confidence 22 566677888877332210 0 033345678888874 457777665556678887 24443344
No 32
>3lnd_A CDH6 protein, cadherin 6; cell adhesion, cell membrane, membrane, transmembr; 2.82A {Mus musculus}
Probab=78.01 E-value=5.3 Score=33.95 Aligned_cols=129 Identities=16% Similarity=0.240 Sum_probs=62.5
Q ss_pred CCCceEEEEEEEeecCCCCcccccceeeeEEEEeeC-CCCceeeeeecceeecCCC--ceEEEeEEecC------CCCCc
Q psy5085 170 WDPVEEFFLRLTLLNKSADMVKLGGLNIMEVTIIDD-DDPGIIQFEKRGYLVKESS--GVVAIPILRTS------GSDGD 240 (319)
Q Consensus 170 ~E~dE~F~v~L~~~~~~~~~~~lg~~~~a~VtI~Dd-d~~g~~~F~~~~~~V~E~~--g~~~v~V~R~~------g~~g~ 240 (319)
+|....|.|.+........+. +-......|+|.|- |+++.|.-..-...|.|+. |+....|.-.- |..+
T Consensus 65 rE~~~~y~l~v~a~D~~~~~~-~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~~g~n~- 142 (207)
T 3lnd_A 65 REEKPVYILRAQAVNRRTGRP-VEPESEFIIKIHDINDNEPIFTKDVYTATVPEMADVGTFVVQVTATDADDPTYGNSA- 142 (207)
T ss_dssp GGGCCEEEC----CBSSSCCC-CSCCCCCEEEEECCSCCCCEESCSEEEEEEESSCCTTCEEEECCEECSSCTTSSSTT-
T ss_pred cccCCEEEEEEEEEECCCCCc-cccEEEEEEEECccCCCCCccCCCceEEEEeCCCCCCCEEEEEEEEeCCCCCCCCCc-
Confidence 566667877777332211011 33335678888874 5788877666667888974 55545544332 2223
Q ss_pred EEEEEEeeeccccCCCcccc--cceEEEEeCCeeEEEEEEEeecCCCCCCCeEEEEEEeCCCC-Ce--eeeccceEEEEE
Q psy5085 241 VSVKWKTVDKTAISSRDYKG--GSGVITFKHGEVRRVLEIPIIDDLKPEKDEYFEVKLSEPTG-GA--KIGVVNHCAVTI 315 (319)
Q Consensus 241 v~V~~~t~dGTA~~G~DY~~--~~g~l~F~~get~k~i~I~IidD~~~E~dE~F~v~L~~p~g-~~--~lG~~~~~~VtI 315 (319)
.+.|+...|.. -|.- ..|.|.... ..-.+|....|.+.+..-.+ ++ .+-...+++|+|
T Consensus 143 -~i~Y~i~~~~~----~F~Id~~tG~i~~~~------------~~lD~E~~~~y~l~V~A~D~g~~~~~~s~t~~v~I~V 205 (207)
T 3lnd_A 143 -KVVYSILQGQP----YFSVESETGIIKTAL------------LNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITL 205 (207)
T ss_dssp -CCEEEEEESGG----GEEECTTTCEEEECC------------SSCCC--CCEEEEEEEEESGGGCTTCBEEEEEEEEEE
T ss_pred -EEEEEEcCCCC----CEEEcCCCcEEEECc------------ccCCcccCCEEEEEEEEEECCCCCCCcEeEEEEEEEE
Confidence 45666655431 1211 234443221 22335666667666654332 22 344445555555
Q ss_pred eC
Q psy5085 316 TN 317 (319)
Q Consensus 316 ~d 317 (319)
.|
T Consensus 206 ~D 207 (207)
T 3lnd_A 206 TD 207 (207)
T ss_dssp EC
T ss_pred eC
Confidence 44
No 33
>1l3w_A EP-cadherin, C-cadherin; cell adhesion, calcium binding, extracellular, ECT metal binding protein; HET: NAG NDG; 3.08A {Xenopus laevis} SCOP: b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1
Probab=76.91 E-value=22 Score=34.82 Aligned_cols=61 Identities=11% Similarity=0.184 Sum_probs=37.0
Q ss_pred CCCceEEEEEEEeecCCCCcccccceeeeEEEEeeC-CCCceeeeeecceeecCCC--ceEEEeEE
Q psy5085 170 WDPVEEFFLRLTLLNKSADMVKLGGLNIMEVTIIDD-DDPGIIQFEKRGYLVKESS--GVVAIPIL 232 (319)
Q Consensus 170 ~E~dE~F~v~L~~~~~~~~~~~lg~~~~a~VtI~Dd-d~~g~~~F~~~~~~V~E~~--g~~~v~V~ 232 (319)
+|....|.|.+....... + .+-.....+|+|.|- |+++.|.-..-...|.|+. |+....|.
T Consensus 74 rE~~~~y~l~v~A~D~~~-~-~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En~~~gt~v~~v~ 137 (546)
T 1l3w_A 74 REEYDKYVLSSHAVSENG-S-PVEEPMEITINVIDQNDNRPKFTQDVFRGSVREGVQPGTQVMAVS 137 (546)
T ss_dssp TTTCCEEEEEEEEEESSS-C-BCSCCEEEEEEEECCSCCCCEESSSCEEEEEETTCCSSEEEEECC
T ss_pred cccCceEEEEEEEEeCCC-C-cccceEEEEEEEEecccCcCEecCceeEEEEECCCCCCCEEEEEE
Confidence 577778888887332211 0 033345678888874 5677766555566889985 55545544
No 34
>2a62_A Cadherin-8; extracellular domain, homodimer, calcium binding, adhesion; 4.50A {Mus musculus}
Probab=76.01 E-value=38 Score=30.77 Aligned_cols=82 Identities=17% Similarity=0.271 Sum_probs=43.8
Q ss_pred CCCceEEEEEEEeecCCCCcccccceeeeEEEEee-CCCCceeeeeecceeecCCC--ceEEEeEEecCCCCC-cEEEEE
Q psy5085 170 WDPVEEFFLRLTLLNKSADMVKLGGLNIMEVTIID-DDDPGIIQFEKRGYLVKESS--GVVAIPILRTSGSDG-DVSVKW 245 (319)
Q Consensus 170 ~E~dE~F~v~L~~~~~~~~~~~lg~~~~a~VtI~D-dd~~g~~~F~~~~~~V~E~~--g~~~v~V~R~~g~~g-~v~V~~ 245 (319)
+|....|.|.+.+......+..+-....++|+|.| +|+++.|.-..-...|.|+. |+....|.-...-.| .-.|.|
T Consensus 173 ~E~~~~y~l~V~a~D~g~p~~~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~D~g~n~~i~Y 252 (322)
T 2a62_A 173 REAKEEYLVVIQAKDMGGHSGGLSGTTTLTVTLTDVNDNPPKFAQSLYHFSVPEDVVLGTAIGRVKANDQDIGENAQSSY 252 (322)
T ss_dssp GGGCSEEEEEEEEEESCSSSSCCBCCEEEEEEECCCCCCCCCCSCSEEEEEECSCCSSCCEEEEEECCCSSCGGGTCCEE
T ss_pred cccCCeEEEEEEEEECCCCCCCceeEEEEEEEEEecCCCCCeecCCCceeEeECCCCCCcEEEEEEEEeCCCCCCceEEE
Confidence 46666788887733322111012333567777777 45577766555566788975 666556554322112 125677
Q ss_pred Eeeecc
Q psy5085 246 KTVDKT 251 (319)
Q Consensus 246 ~t~dGT 251 (319)
+..+|.
T Consensus 253 ~i~~g~ 258 (322)
T 2a62_A 253 DIIDGD 258 (322)
T ss_dssp EEC---
T ss_pred EEECCC
Confidence 766554
No 35
>3q2v_A Cadherin-1; cell adhesion, calcium binding; HET: MAN; 3.40A {Mus musculus}
Probab=75.38 E-value=44 Score=32.64 Aligned_cols=63 Identities=14% Similarity=0.191 Sum_probs=37.3
Q ss_pred CCCceEEEEEEEeecCCCCccc-ccceeeeEEEEeeCCCCceeeeeecceeecCCC--ceEEEeEE
Q psy5085 170 WDPVEEFFLRLTLLNKSADMVK-LGGLNIMEVTIIDDDDPGIIQFEKRGYLVKESS--GVVAIPIL 232 (319)
Q Consensus 170 ~E~dE~F~v~L~~~~~~~~~~~-lg~~~~a~VtI~Ddd~~g~~~F~~~~~~V~E~~--g~~~v~V~ 232 (319)
+|....|.|.+.+......... +-....++|+|+|-.+++.|.-..-...|.|+. |+....|.
T Consensus 290 ~E~~~~y~l~V~a~D~~~~~~~~~~~~~~v~I~V~DvND~P~f~~~~~~~~v~E~~~~gt~v~~v~ 355 (550)
T 3q2v_A 290 FEAKQQYILHVRVENEEPFEGSLVPSTATVTVDVVDVNEAPIFMPAERRVEVPEDFGVGQEITSYT 355 (550)
T ss_dssp TTTCSEEEEEEEEEESSCCCSSCCCEEEEEEEEEECCCCCCEESSSSCEEEEETTCCSSCEEEECC
T ss_pred ccccceEEEEEEEEeCCCCCCCccceEEEEEEEEEecCCCCeEcCcceEEEEecCCCCCCEEEEEe
Confidence 6777788888874433210001 233456777888866577766555567888975 55544443
No 36
>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A*
Probab=74.52 E-value=12 Score=39.35 Aligned_cols=60 Identities=18% Similarity=0.175 Sum_probs=35.5
Q ss_pred CCCceEEEEEEEeecCCCCcccccceeeeEEEEeeC-CCCceeeeeecceeecCC-CceEEEeE
Q psy5085 170 WDPVEEFFLRLTLLNKSADMVKLGGLNIMEVTIIDD-DDPGIIQFEKRGYLVKES-SGVVAIPI 231 (319)
Q Consensus 170 ~E~dE~F~v~L~~~~~~~~~~~lg~~~~a~VtI~Dd-d~~g~~~F~~~~~~V~E~-~g~~~v~V 231 (319)
+|....|.|.+.+..... + .+-....++|+|.|- |+++.|.-..-...|.|+ .|+....|
T Consensus 336 rE~~~~y~l~V~A~D~g~-~-~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En~~gt~V~~v 397 (880)
T 1q55_A 336 REKFPEYTLTVQATDLEG-A-GLSVEGKAIIQITDANDNAPIFDPKTYTALVPENEIGFEVQRL 397 (880)
T ss_dssp TTTCCEEEEEEEEEHHHH-T-SCEEECCEEEEEECCCCCCCCBSCSEEEEEEESSSCCCEEEEE
T ss_pred HHHcceeEEEEEEEECCC-C-CccceeEEEEEEEeccCCCCCccccceEEEeecCCCCcEEEEE
Confidence 577778888887432210 0 033445678888874 557777655556688887 24443344
No 37
>2x2u_A Proto-oncogene tyrosine-protein kinase receptor RET; hirschsprung disease, extracellular domain, disease mutation, transferase, glycoprotein; HET: NAG SO4; 2.00A {Homo sapiens}
Probab=71.86 E-value=19 Score=31.44 Aligned_cols=104 Identities=13% Similarity=0.106 Sum_probs=56.0
Q ss_pred eeeEEEEee-CCCCce----------eeeeecceeecCCC--ceEEEeEEec---CCCCCcEEEEEEeeeccccCCCccc
Q psy5085 196 NIMEVTIID-DDDPGI----------IQFEKRGYLVKESS--GVVAIPILRT---SGSDGDVSVKWKTVDKTAISSRDYK 259 (319)
Q Consensus 196 ~~a~VtI~D-dd~~g~----------~~F~~~~~~V~E~~--g~~~v~V~R~---~g~~g~v~V~~~t~dGTA~~G~DY~ 259 (319)
..+.|+|+| +|+++. |.-..-.+.|.|+. |+....|.-+ .|..+. |.|+...+. +.-|.
T Consensus 113 ~~v~I~V~DvNDn~P~~~~~~~~~~~F~~~~y~~~v~En~~~Gt~v~~v~A~D~D~g~n~~--i~Y~i~~~~---~~~F~ 187 (246)
T 2x2u_A 113 GCARVYFSFFNTSFPACSSLKPRELCFPETRPSFRIRENRPPGTFHQFRLLPVQFLCPQIS--VAYRLLEGE---GLPFR 187 (246)
T ss_dssp TEEEEEEEEESSCCCCGGGCCHHHHHSCSSCCCEEEEBTSCCCEEEECSCHHHHHHCTTSC--EEEEEESCT---TSSEE
T ss_pred EEEEEEEEECCCCCCccccccccccccCCCcEEEEEECCCCCCcEEEEEEEEcCCCCCCcE--EEEEEccCC---CCCEE
Confidence 567888887 566777 43334456788985 5554444322 233343 567665553 22232
Q ss_pred c--cceEEEEeCCeeEEEEEEEeecCCCCCCCeEEEEEEe--CCCCCeeeeccceEEEEEeC
Q psy5085 260 G--GSGVITFKHGEVRRVLEIPIIDDLKPEKDEYFEVKLS--EPTGGAKIGVVNHCAVTITN 317 (319)
Q Consensus 260 ~--~~g~l~F~~get~k~i~I~IidD~~~E~dE~F~v~L~--~p~g~~~lG~~~~~~VtI~d 317 (319)
- .+|.|+ +..--.+|....|.+.+. .-.|++.+-...++.|+|.|
T Consensus 188 Id~~tG~i~-------------~~~~LDrE~~~~y~l~V~A~d~dg~p~~ss~~~v~I~V~D 236 (246)
T 2x2u_A 188 SAPDSLEVS-------------TRWALDREQREKYELVAVCTVHAGAREEVVMVPFPVTVYD 236 (246)
T ss_dssp CCTTCCEEE-------------ESSCBCTTTCSEEEEEEEEEEC---CCEEEEEEEEEEEEC
T ss_pred EECCcCEEE-------------eCCccCccccceEEEEEEEEecCCCCcceEEEEEEEEEEE
Confidence 2 344432 222233566777777776 43455666666667777765
No 38
>4dqa_A Uncharacterized protein; two domains structure, DUF 1735, laminin_G_3 concanavalin A- lectin/glucanases superfamily domain; HET: MSE; 1.50A {Bacteroides ovatus}
Probab=61.42 E-value=42 Score=31.07 Aligned_cols=77 Identities=13% Similarity=0.172 Sum_probs=55.4
Q ss_pred CCeEEEEEEEEeCCCCceEEEEEEEeCCCc------cCCCCeee--------eceEEEEeCCce-EEEEEEEEecCCCCC
Q psy5085 107 DIGSFKVGILRHGNLQNIARVRVDSIDGSA------KQGKRYQK--------VNQTVVFKENET-EKFVTIRIINDEKWD 171 (319)
Q Consensus 107 ~~g~v~vtV~R~g~~~~~vtV~~~t~dGTA------~~g~Dy~~--------~~gtl~F~~Get-~k~i~I~IidD~i~E 171 (319)
+.+...|+|..+......++|.+...|-+. ..|.+|.. .+.++++++|+. ...+.|.+.+.+-++
T Consensus 25 ~~~~~~~~v~ls~~~~~dv~v~~~vd~~~ll~~YN~~~~t~y~~LP~~~y~l~~~~v~I~aG~~~s~~v~i~~~~~~~l~ 104 (355)
T 4dqa_A 25 DVMTFDLVSRLSSATSSQVDVSYSVAEPSVVDEYNAKYGTNYEMLDVSQVKLSSTTSSISSGKLYADNIEVELSGLEALK 104 (355)
T ss_dssp CCEEEEECCEESSCCSSCEEEEEEECCHHHHHHHHHHHTCCCEECCGGGEEESCSEEEECTTCSBCCCEEEEECCCTTSC
T ss_pred CceEEEEEEEecCCCCCCEEEEEEECCHHHHHHHHHHcCCeeEECCHHHEEEcCCEEEEcCCCEeeeeEEEEEeecccCC
Confidence 456778888888888999999997651221 12444543 356899999994 557888888766678
Q ss_pred CceEEEEEEEee
Q psy5085 172 PVEEFFLRLTLL 183 (319)
Q Consensus 172 ~dE~F~v~L~~~ 183 (319)
.++.|.|=|++.
T Consensus 105 ~~~~YvLPl~i~ 116 (355)
T 4dqa_A 105 AGNSYVLPMRVH 116 (355)
T ss_dssp SSEEEEEEEEEE
T ss_pred CCCeEEEEEEEe
Confidence 888998888833
No 39
>4ay0_A Chaperone protein CAF1M; amino acid motifs, bacterial capsules, bacterial proteins, gene expression regulation, molecular chaperones, binding; 1.52A {Yersinia pestis} PDB: 1p5v_A 1p5u_A 1z9s_A 2os7_A 3dos_A 3dpb_A 3dsn_A 4b0m_M 4az8_A 4ayf_A
Probab=56.63 E-value=95 Score=26.64 Aligned_cols=84 Identities=7% Similarity=0.031 Sum_probs=56.9
Q ss_pred EEEEeeeEEEecCCeEEEEEEEEeCCCCceEEEEEEEeCCCccC--CCCeeeeceEEEEeCCceEEEEEEEEecCCCCCC
Q psy5085 95 IEFHAVTVAVREDIGSFKVGILRHGNLQNIARVRVDSIDGSAKQ--GKRYQKVNQTVVFKENETEKFVTIRIINDEKWDP 172 (319)
Q Consensus 95 i~F~~~~y~V~E~~g~v~vtV~R~g~~~~~vtV~~~t~dGTA~~--g~Dy~~~~gtl~F~~Get~k~i~I~IidD~i~E~ 172 (319)
|....+.+-..|+...++|.|.-.++ .+.-|---..+|.... ...|..+.-.....||+. +.+.|--..+.++..
T Consensus 14 v~l~~TRvIy~~~~k~~sl~l~N~~~--~p~LvQswv~~~~~~~~~~~pFivtPPl~Rl~p~~~-q~lRI~~~~~~LP~D 90 (218)
T 4ay0_A 14 VTIGESRIIYPLDAAGVMVSVKNTQD--YPVLIQSRIYDENKEKESEDPFVVTPPLFRLDAKQQ-NSLRIAQAGGVFPRD 90 (218)
T ss_dssp EEESCCEEEEETTCSCEEEEEECCSS--SCEEEEEEEECTTSCCCSSCSEEEESSEEEECTTCE-EEEEEEECSCCCCSS
T ss_pred EEECceEEEECCCCcEEEEEEEcCCC--CCEEEEEEEecCCCCccccCCEEECCCeEEeCCCCc-eEEEEEecCCCCCcC
Confidence 44555555667777778888865453 4555543345554333 234888888889999986 577777777778877
Q ss_pred ceE-EEEEEE
Q psy5085 173 VEE-FFLRLT 181 (319)
Q Consensus 173 dE~-F~v~L~ 181 (319)
-|+ |++.+.
T Consensus 91 RESlf~lnv~ 100 (218)
T 4ay0_A 91 KESLKWLCVK 100 (218)
T ss_dssp SCEEEEEEEE
T ss_pred cEEEEEEEEE
Confidence 786 898888
No 40
>3poh_A Endo-beta-N-acetylglucosaminidase F1; TIM barrel, structural genomics, joint center for structural genomics, JCSG; 1.55A {Bacteroides thetaiotaomicron}
Probab=56.32 E-value=38 Score=32.72 Aligned_cols=80 Identities=9% Similarity=0.099 Sum_probs=57.6
Q ss_pred EEecCCeEEEEEEEEeCCCCceEEEEEEEeCCCc------cCCCCeeee---------ceEEEEeCCceEEEEEEEEecC
Q psy5085 103 AVREDIGSFKVGILRHGNLQNIARVRVDSIDGSA------KQGKRYQKV---------NQTVVFKENETEKFVTIRIIND 167 (319)
Q Consensus 103 ~V~E~~g~v~vtV~R~g~~~~~vtV~~~t~dGTA------~~g~Dy~~~---------~gtl~F~~Get~k~i~I~IidD 167 (319)
.+.++.++..|+|..+......++|.+.. |-+. ..|.+|... .+.++++.|..+..+.|.+.+-
T Consensus 38 ~l~~~~~t~~i~v~Ls~~~~~Dv~vtl~v-D~slL~~YN~~ngT~Y~lLP~~~Y~l~~~~~vi~~gg~~S~~v~I~i~~l 116 (451)
T 3poh_A 38 ELHGETYATTVKMGLSKTPNTATSAKVKI-DAAYLETYNKAHNTDFALYPQDLVTFANEGILTVNANTKSAEVEMTIRAG 116 (451)
T ss_dssp EECSSEEEEEEEEEESSCCCTTCCCEEEE-CHHHHHHHHHHHTCCCEECCGGGEEEGGGGBCEEEGGGTEEEEEEEEECC
T ss_pred EEecCCeeEEEEEEeCCCCCCCEEEEEEE-CHHHHHHHHHHcCCccEECcHHHEEecCCceEEecCCeEEEEEEEEEecc
Confidence 34455667788888888888888888875 3231 235566532 3688899999899999999875
Q ss_pred CCCCCceEEEEEEEee
Q psy5085 168 EKWDPVEEFFLRLTLL 183 (319)
Q Consensus 168 ~i~E~dE~F~v~L~~~ 183 (319)
+.++.+++|.|=|++.
T Consensus 117 ~~L~~g~~Y~LPv~I~ 132 (451)
T 3poh_A 117 EGLQEDKTYAIPVAIS 132 (451)
T ss_dssp SSCCTTCEEEEEEEEE
T ss_pred ccCCCCCEEEEEEEEE
Confidence 5677888888887743
No 41
>3poh_A Endo-beta-N-acetylglucosaminidase F1; TIM barrel, structural genomics, joint center for structural genomics, JCSG; 1.55A {Bacteroides thetaiotaomicron}
Probab=48.43 E-value=38 Score=32.71 Aligned_cols=78 Identities=15% Similarity=0.225 Sum_probs=53.7
Q ss_pred CceEEEeEEecCCCCCcEEEEEEeeecc------ccCCCcccc---------cceEEEEeCCeeEEEEEEEeecCCCCCC
Q psy5085 224 SGVVAIPILRTSGSDGDVSVKWKTVDKT------AISSRDYKG---------GSGVITFKHGEVRRVLEIPIIDDLKPEK 288 (319)
Q Consensus 224 ~g~~~v~V~R~~g~~g~v~V~~~t~dGT------A~~G~DY~~---------~~g~l~F~~get~k~i~I~IidD~~~E~ 288 (319)
.++..|.|..+.....++.|.+.. |-+ +..|.+|.. ..+.++++.|..+..+.|.+.+-+..+.
T Consensus 43 ~~t~~i~v~Ls~~~~~Dv~vtl~v-D~slL~~YN~~ngT~Y~lLP~~~Y~l~~~~~vi~~gg~~S~~v~I~i~~l~~L~~ 121 (451)
T 3poh_A 43 TYATTVKMGLSKTPNTATSAKVKI-DAAYLETYNKAHNTDFALYPQDLVTFANEGILTVNANTKSAEVEMTIRAGEGLQE 121 (451)
T ss_dssp EEEEEEEEEESSCCCTTCCCEEEE-CHHHHHHHHHHHTCCCEECCGGGEEEGGGGBCEEEGGGTEEEEEEEEECCSSCCT
T ss_pred CeeEEEEEEeCCCCCCCEEEEEEE-CHHHHHHHHHHcCCccEECcHHHEEecCCceEEecCCeEEEEEEEEEeccccCCC
Confidence 345678888888888888888866 433 233566654 2467888999888899999976444566
Q ss_pred CeEEE--EEEeCCCCC
Q psy5085 289 DEYFE--VKLSEPTGG 302 (319)
Q Consensus 289 dE~F~--v~L~~p~g~ 302 (319)
++++. |+|.+..|+
T Consensus 122 g~~Y~LPv~I~s~sg~ 137 (451)
T 3poh_A 122 DKTYAIPVAISDQSSD 137 (451)
T ss_dssp TCEEEEEEEEESCCTT
T ss_pred CCEEEEEEEEEecCCC
Confidence 67665 466665544
No 42
>4dqa_A Uncharacterized protein; two domains structure, DUF 1735, laminin_G_3 concanavalin A- lectin/glucanases superfamily domain; HET: MSE; 1.50A {Bacteroides ovatus}
Probab=45.96 E-value=67 Score=29.65 Aligned_cols=74 Identities=9% Similarity=0.141 Sum_probs=50.4
Q ss_pred CCceEEEeEEecCCCCCcEEEEEEeeeccc------cCCCcccc--------cceEEEEeCCe-eEEEEEEEeecCCCCC
Q psy5085 223 SSGVVAIPILRTSGSDGDVSVKWKTVDKTA------ISSRDYKG--------GSGVITFKHGE-VRRVLEIPIIDDLKPE 287 (319)
Q Consensus 223 ~~g~~~v~V~R~~g~~g~v~V~~~t~dGTA------~~G~DY~~--------~~g~l~F~~ge-t~k~i~I~IidD~~~E 287 (319)
......|.|..+.....++.|.+...|-+. ..|.+|.. .+.++++++|+ .+..+.|.+.+....+
T Consensus 25 ~~~~~~~~v~ls~~~~~dv~v~~~vd~~~ll~~YN~~~~t~y~~LP~~~y~l~~~~v~I~aG~~~s~~v~i~~~~~~~l~ 104 (355)
T 4dqa_A 25 DVMTFDLVSRLSSATSSQVDVSYSVAEPSVVDEYNAKYGTNYEMLDVSQVKLSSTTSSISSGKLYADNIEVELSGLEALK 104 (355)
T ss_dssp CCEEEEECCEESSCCSSCEEEEEEECCHHHHHHHHHHHTCCCEECCGGGEEESCSEEEECTTCSBCCCEEEEECCCTTSC
T ss_pred CceEEEEEEEecCCCCCCEEEEEEECCHHHHHHHHHHcCCeeEECCHHHEEEcCCEEEEcCCCEeeeeEEEEEeecccCC
Confidence 345677888888888899999987641221 12444543 46789999999 4446888887655556
Q ss_pred CCeEEEEEE
Q psy5085 288 KDEYFEVKL 296 (319)
Q Consensus 288 ~dE~F~v~L 296 (319)
.++++.|=|
T Consensus 105 ~~~~YvLPl 113 (355)
T 4dqa_A 105 AGNSYVLPM 113 (355)
T ss_dssp SSEEEEEEE
T ss_pred CCCeEEEEE
Confidence 777776544
No 43
>2a62_A Cadherin-8; extracellular domain, homodimer, calcium binding, adhesion; 4.50A {Mus musculus}
Probab=42.52 E-value=1.9e+02 Score=25.96 Aligned_cols=29 Identities=17% Similarity=0.079 Sum_probs=15.1
Q ss_pred eeeEEEEee-CCCCceeeeeecceeecCCC
Q psy5085 196 NIMEVTIID-DDDPGIIQFEKRGYLVKESS 224 (319)
Q Consensus 196 ~~a~VtI~D-dd~~g~~~F~~~~~~V~E~~ 224 (319)
....|+|.| +|+++.|.-..-...|.|+.
T Consensus 90 ~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~ 119 (322)
T 2a62_A 90 SEFIIKVQDINDNAPEFLNGPYHATVPEMS 119 (322)
T ss_dssp EEECEECCCCSCSCBCCSSSEEEEEECSSC
T ss_pred EEEEEEEEecCCCCCccCCCceEEEEeCCC
Confidence 344555555 34456554444445666664
No 44
>1zvn_A Mn-cadherin; strand dimer, ----; 2.16A {Gallus gallus}
Probab=39.34 E-value=1.1e+02 Score=22.42 Aligned_cols=33 Identities=9% Similarity=0.207 Sum_probs=20.6
Q ss_pred CCCCCeEEEEEEeCCC-C-CeeeeccceEEEEEeC
Q psy5085 285 KPEKDEYFEVKLSEPT-G-GAKIGVVNHCAVTITN 317 (319)
Q Consensus 285 ~~E~dE~F~v~L~~p~-g-~~~lG~~~~~~VtI~d 317 (319)
.+|....|.+.+..-. | ++.+-....+.|+|.|
T Consensus 65 DrE~~~~y~l~V~A~D~G~~p~l~~~~~v~I~V~D 99 (99)
T 1zvn_A 65 DREERSQYTLRAQALDRRTGRPMEPESEFIIKIQD 99 (99)
T ss_dssp CTTTCSEEEEEEEEEETTTCCBSSCCEEEEEEEEC
T ss_pred CCccCCeEEEEEEEEECCCCCCcceeEEEEEEEeC
Confidence 3577777777665543 3 3566666677777764
No 45
>2co7_B SAFB chaperone, putative fimbriae assembly chaperone; pilus subunit, adhesion, strand complementation, pathogenesis, fibril protein; 1.8A {Salmonella typhimurium} SCOP: b.1.11.1 b.7.2.1 PDB: 2co6_B
Probab=35.17 E-value=2.1e+02 Score=24.38 Aligned_cols=87 Identities=8% Similarity=0.021 Sum_probs=62.0
Q ss_pred eeEEEEEeeeEEEecCCeEEEEEEEEeCCCCceEEEEEEEeCCCccCCCCeeeeceEEEEeCCceEEEEEEEEecCCCCC
Q psy5085 92 YAIIEFHAVTVAVREDIGSFKVGILRHGNLQNIARVRVDSIDGSAKQGKRYQKVNQTVVFKENETEKFVTIRIINDEKWD 171 (319)
Q Consensus 92 ~~~i~F~~~~y~V~E~~g~v~vtV~R~g~~~~~vtV~~~t~dGTA~~g~Dy~~~~gtl~F~~Get~k~i~I~IidD~i~E 171 (319)
..-|...++..-..|+...++|.|.-.++ .+.-|.--..+|......+|..+.-.....||+. +.+.|--..+.++.
T Consensus 11 ~A~v~i~~TRvIy~~~~k~~sl~l~N~~~--~p~LvQsWv~~~~~~~~~pfivtPPl~rl~p~~~-q~lRI~~~~~~lP~ 87 (221)
T 2co7_B 11 LFSVKLGATRVIYHAGTAGATLSVSNPQN--YPILVQSSVKAADKSSPAPFLVMPPLFRLEANQQ-SQLRIVRTGGDMPT 87 (221)
T ss_dssp EEECEESCSEEEEETTSSCEEEEEECCSS--SCEEEEEEEEETTSSSBCSEEEESSEEEECTTCE-EEEEEEECCCCCCS
T ss_pred eEEEEEcceEEEEcCCCCEEEEEEEcCCC--CcEEEEEEEecCCCCccCCEEEeCCEEEECCCCc-eEEEEEECCCCCCC
Confidence 45677888888888888888888865553 3444433334444444568998888999999987 56777666677887
Q ss_pred Cce-EEEEEEE
Q psy5085 172 PVE-EFFLRLT 181 (319)
Q Consensus 172 ~dE-~F~v~L~ 181 (319)
..| .|++.+.
T Consensus 88 DrEslf~lnv~ 98 (221)
T 2co7_B 88 DRETLQWVCIK 98 (221)
T ss_dssp SSCEEEEEEEE
T ss_pred CceEEEEEEee
Confidence 777 6888888
No 46
>2yst_A Protocadherin-7; BH-PCDH, beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=34.96 E-value=51 Score=24.91 Aligned_cols=102 Identities=13% Similarity=0.144 Sum_probs=46.6
Q ss_pred EEee-CCCCceeeeeecceeecCCC--ceEEEeEEecC---CCCCcEEEEEEeeeccccCCCcccc--cceEEEEeCCee
Q psy5085 201 TIID-DDDPGIIQFEKRGYLVKESS--GVVAIPILRTS---GSDGDVSVKWKTVDKTAISSRDYKG--GSGVITFKHGEV 272 (319)
Q Consensus 201 tI~D-dd~~g~~~F~~~~~~V~E~~--g~~~v~V~R~~---g~~g~v~V~~~t~dGTA~~G~DY~~--~~g~l~F~~get 272 (319)
+|+| +|+++.|.-..-...|.|+. |+....|.-+- |..+ .|.|+...+......-|.- .+|.|..
T Consensus 3 ~V~DvNDn~P~F~~~~y~~~v~En~~~Gt~v~~v~A~D~D~g~n~--~i~Y~i~~~~~~~~~~F~Id~~tG~I~~----- 75 (119)
T 2yst_A 3 SGSSGNDNSPRFEKSVYEADLAENSAPGTPILQLRAADLDVGVNG--QIEYVFGAATESVRRLLRLDETSGWLSV----- 75 (119)
T ss_dssp CCCCSCCCCCCCSSSEEEEEEETTCCTTCEEEECCCCCSSSSCCS--CCCCEECSCCTTHHHHEEECTTTCEEEE-----
T ss_pred eEecCCCCCCCcCCCcEEEEEECCCCCCCEEEEEEEEeCCCCCCC--eEEEEEecCCCccccEEEEeCCceEEEE-----
Confidence 3444 34566665555556778875 55544443221 1222 3456554332100001111 2344432
Q ss_pred EEEEEEEeecCCCCCCCeEEEEEEeCCC-CCeeeeccceEEEEEeC
Q psy5085 273 RRVLEIPIIDDLKPEKDEYFEVKLSEPT-GGAKIGVVNHCAVTITN 317 (319)
Q Consensus 273 ~k~i~I~IidD~~~E~dE~F~v~L~~p~-g~~~lG~~~~~~VtI~d 317 (319)
..--.+|....|.+.+..-. |++.+-....+.|+|.|
T Consensus 76 --------~~~LD~E~~~~y~l~V~A~D~g~p~~s~~~~v~I~V~D 113 (119)
T 2yst_A 76 --------LHRIDREEVNQLRFTVMARDRGQPPKTDKATVVLNIKD 113 (119)
T ss_dssp --------CSCCCTTTCSEEEEEEEECCSBTTBCCEEEEEEEEEEC
T ss_pred --------CccCCcccCCEEEEEEEEEECCCCCcEEEEEEEEEEEe
Confidence 22233566667777665443 34444344555565554
No 47
>1zxk_A Cadherin-8; strand dimer, cell adhesion; 2.00A {Mus musculus} PDB: 2a4c_A
Probab=30.93 E-value=1.5e+02 Score=21.53 Aligned_cols=33 Identities=3% Similarity=0.103 Sum_probs=19.6
Q ss_pred CCCCCeEEEEEEeCCC-CC-eeeeccceEEEEEeC
Q psy5085 285 KPEKDEYFEVKLSEPT-GG-AKIGVVNHCAVTITN 317 (319)
Q Consensus 285 ~~E~dE~F~v~L~~p~-g~-~~lG~~~~~~VtI~d 317 (319)
.+|....|.+.+..-. |. +.+-..+.+.|+|.|
T Consensus 64 DrE~~~~y~l~v~A~D~g~~~~l~~~~~v~I~V~D 98 (98)
T 1zxk_A 64 DREEKAEYTLTAQAVDFETNKPLEPPSEFIIKVQD 98 (98)
T ss_dssp CTTTCSEEEEEEEEEETTTCCBSSCCEEEEEEECC
T ss_pred CCcCCCeEEEEEEEEECCCCCCcceeEEEEEEEEC
Confidence 3576677777665443 32 456556666666654
No 48
>1klf_A FIMC chaperone, chaperone protein FIMC; adhesin-chaperone complex, mannose-bound, chaperone/adhesin complex complex; HET: MAN; 2.79A {Escherichia coli} SCOP: b.1.11.1 b.7.2.1 PDB: 1kiu_A* 3rfz_C 1qun_A 1bf8_A 1ze3_C 3bwu_C 3jwn_C
Probab=27.21 E-value=2.8e+02 Score=23.29 Aligned_cols=83 Identities=10% Similarity=0.089 Sum_probs=55.0
Q ss_pred EEeeeEEEecCCeEEEEEEEEeCCCCceEEEEEEEeCCCccCCCCeeeeceEEEEeCCceEEEEEEEE-ecCCCCCCce-
Q psy5085 97 FHAVTVAVREDIGSFKVGILRHGNLQNIARVRVDSIDGSAKQGKRYQKVNQTVVFKENETEKFVTIRI-INDEKWDPVE- 174 (319)
Q Consensus 97 F~~~~y~V~E~~g~v~vtV~R~g~~~~~vtV~~~t~dGTA~~g~Dy~~~~gtl~F~~Get~k~i~I~I-idD~i~E~dE- 174 (319)
.+.+..-..|+...++|.|.-.+.. .+.-|.--..+|......+|..+.-.....||+. +.+.|-- ..+.++...|
T Consensus 4 l~~TRvIy~~~~k~~sl~l~N~~~~-~p~LvQsWi~~~~~~~~~pfivtPPl~rl~p~~~-q~lRI~~~~~~~lP~DrEs 81 (205)
T 1klf_A 4 LGATRVIYPAGQKQVQLAVTNNDEN-STYLIQSWVENADGVKDGRFIVTPPLFAMKGKKE-NTLRILDATNNQLPQDRES 81 (205)
T ss_dssp ESCSEEEEETTCSEEEEEEEECCSS-CCEEEEEEEEETTSCCCSSEEEESSEEEECSSEE-EEEEEEECSCSCSCSSSCE
T ss_pred ecceEEEEeCCCcEEEEEEEcCCCC-CcEEEEEEEecCCCCccCCEEEcCCeEEECCCCc-eEEEEEecCCCCCCCCceE
Confidence 3445556677778888888766543 1333322233443344568988888899998876 5677766 6667887777
Q ss_pred EEEEEEE
Q psy5085 175 EFFLRLT 181 (319)
Q Consensus 175 ~F~v~L~ 181 (319)
.|++.+.
T Consensus 82 lf~lnv~ 88 (205)
T 1klf_A 82 LFWMNVK 88 (205)
T ss_dssp EEEEEEE
T ss_pred EEEEEeE
Confidence 6888888
No 49
>2yqg_A Desmoglein-2, HDGC; cadherin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=27.10 E-value=27 Score=26.97 Aligned_cols=40 Identities=13% Similarity=0.145 Sum_probs=22.6
Q ss_pred CCCceEEEEEEEeecCCCCcccccceeeeEEEEeeC-CCCcee
Q psy5085 170 WDPVEEFFLRLTLLNKSADMVKLGGLNIMEVTIIDD-DDPGII 211 (319)
Q Consensus 170 ~E~dE~F~v~L~~~~~~~~~~~lg~~~~a~VtI~Dd-d~~g~~ 211 (319)
+|....|.|.+.+..... +. +-....+.|+|+|- |+++.|
T Consensus 80 rE~~~~y~l~V~A~D~g~-p~-~~~~~~v~I~V~DvNDn~P~F 120 (123)
T 2yqg_A 80 REETPFFLLTGYALDARG-NN-VEKPLELRIKVLDINDNEPVF 120 (123)
T ss_dssp TTTBSEEEEEEEEECTTC-CE-EEEEECCEEEEECTTCCCCCC
T ss_pred cccCceEEEEEEEEECCC-Cc-eEEEEEEEEEEEEcCCCCCEe
Confidence 566777888877333221 11 33335577777764 456665
No 50
>4djm_A DRAB; chaperone, PILI; 2.52A {Escherichia coli}
Probab=26.13 E-value=3.2e+02 Score=23.62 Aligned_cols=86 Identities=8% Similarity=0.046 Sum_probs=58.1
Q ss_pred eEEEEEeeeEEEecCCeEEEEEEEEeCCCCceEEEEEEEeCCCccCCCCeeeeceEEEEeCCceEEEEEEEEecCCCCCC
Q psy5085 93 AIIEFHAVTVAVREDIGSFKVGILRHGNLQNIARVRVDSIDGSAKQGKRYQKVNQTVVFKENETEKFVTIRIINDEKWDP 172 (319)
Q Consensus 93 ~~i~F~~~~y~V~E~~g~v~vtV~R~g~~~~~vtV~~~t~dGTA~~g~Dy~~~~gtl~F~~Get~k~i~I~IidD~i~E~ 172 (319)
.-|....+..-..|+...++|.|.-.+.. +.-|.--..++......+|..+.-.....||+. +.+.|--..+.++..
T Consensus 22 a~v~l~~TRvIy~~~~k~~sl~l~N~~~~--P~LvQsWv~~~~~~~~~pfivtPPlfRlep~~~-q~lRIi~~~~~LP~D 98 (239)
T 4djm_A 22 FSLHLGATRVVYNPASSGETLTVINDQDY--PMLVQSEVLSEDQKSPAPFVVTPPLFRLDGQQS-SRLRIVRTGGEFPPD 98 (239)
T ss_dssp ECCEESCSEEEECTTSSCEEEEEEECSSS--CEEEEEEEECTTSSSBCSEEEESSEEEECTTEE-EEEEEEECSCCCCSS
T ss_pred EeEEEcceEEEEeCCCCEEEEEEEeCCCC--cEEEEEEEEcCCCCccCCEEEcCCeEEECCCCc-eEEEEEECCCCCCCC
Confidence 44666777777778778888888766543 444432334444344467888888888999876 567776566667766
Q ss_pred ceE-EEEEEE
Q psy5085 173 VEE-FFLRLT 181 (319)
Q Consensus 173 dE~-F~v~L~ 181 (319)
-|+ |+|.+.
T Consensus 99 RESlf~lnv~ 108 (239)
T 4djm_A 99 RESLQWICVK 108 (239)
T ss_dssp SCEEEEEEEE
T ss_pred ceEEEEEEEE
Confidence 664 888887
Done!