BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5086
(124 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5XIH7|PHB2_RAT Prohibitin-2 OS=Rattus norvegicus GN=Phb2 PE=1 SV=1
Length = 299
Score = 188 bits (477), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 90/124 (72%), Positives = 103/124 (83%), Gaps = 2/124 (1%)
Query: 1 MAQSKLNDFAGRFGKGPKGVGVGLKLAALAGAAAYGVSQSMFTVEGGHRAIMFSRIGGVQ 60
MAQ+ L D AGR GP+G+G LKL AGA AYGV +S+FTVEGGHRAI F+RIGGVQ
Sbjct: 1 MAQN-LKDLAGRLPSGPRGMGTALKLLLGAGAVAYGVRESVFTVEGGHRAIFFNRIGGVQ 59
Query: 61 -NNVFAEGLHFRLPWFQYPIIYDIRSRPRKISSPTGSKDLQMVNISLRVLARPDASKLPK 119
+ + AEGLHFR+PWFQYPIIYDIR+RPRKISSPTGSKDLQMVNISLRVL+RP+A +LP
Sbjct: 60 QDTILAEGLHFRIPWFQYPIIYDIRARPRKISSPTGSKDLQMVNISLRVLSRPNAQELPS 119
Query: 120 MLCR 123
M R
Sbjct: 120 MYQR 123
>sp|O35129|PHB2_MOUSE Prohibitin-2 OS=Mus musculus GN=Phb2 PE=1 SV=1
Length = 299
Score = 188 bits (477), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 90/124 (72%), Positives = 103/124 (83%), Gaps = 2/124 (1%)
Query: 1 MAQSKLNDFAGRFGKGPKGVGVGLKLAALAGAAAYGVSQSMFTVEGGHRAIMFSRIGGVQ 60
MAQ+ L D AGR GP+G+G LKL AGA AYGV +S+FTVEGGHRAI F+RIGGVQ
Sbjct: 1 MAQN-LKDLAGRLPAGPRGMGTALKLLLGAGAVAYGVRESVFTVEGGHRAIFFNRIGGVQ 59
Query: 61 -NNVFAEGLHFRLPWFQYPIIYDIRSRPRKISSPTGSKDLQMVNISLRVLARPDASKLPK 119
+ + AEGLHFR+PWFQYPIIYDIR+RPRKISSPTGSKDLQMVNISLRVL+RP+A +LP
Sbjct: 60 QDTILAEGLHFRIPWFQYPIIYDIRARPRKISSPTGSKDLQMVNISLRVLSRPNAQELPS 119
Query: 120 MLCR 123
M R
Sbjct: 120 MYQR 123
>sp|Q99623|PHB2_HUMAN Prohibitin-2 OS=Homo sapiens GN=PHB2 PE=1 SV=2
Length = 299
Score = 188 bits (477), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 90/124 (72%), Positives = 103/124 (83%), Gaps = 2/124 (1%)
Query: 1 MAQSKLNDFAGRFGKGPKGVGVGLKLAALAGAAAYGVSQSMFTVEGGHRAIMFSRIGGVQ 60
MAQ+ L D AGR GP+G+G LKL AGA AYGV +S+FTVEGGHRAI F+RIGGVQ
Sbjct: 1 MAQN-LKDLAGRLPAGPRGMGTALKLLLGAGAVAYGVRESVFTVEGGHRAIFFNRIGGVQ 59
Query: 61 -NNVFAEGLHFRLPWFQYPIIYDIRSRPRKISSPTGSKDLQMVNISLRVLARPDASKLPK 119
+ + AEGLHFR+PWFQYPIIYDIR+RPRKISSPTGSKDLQMVNISLRVL+RP+A +LP
Sbjct: 60 QDTILAEGLHFRIPWFQYPIIYDIRARPRKISSPTGSKDLQMVNISLRVLSRPNAQELPS 119
Query: 120 MLCR 123
M R
Sbjct: 120 MYQR 123
>sp|Q5RB19|PHB2_PONAB Prohibitin-2 OS=Pongo abelii GN=PHB2 PE=2 SV=1
Length = 299
Score = 187 bits (476), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 90/124 (72%), Positives = 103/124 (83%), Gaps = 2/124 (1%)
Query: 1 MAQSKLNDFAGRFGKGPKGVGVGLKLAALAGAAAYGVSQSMFTVEGGHRAIMFSRIGGVQ 60
MAQ+ L D AGR GP+G+G LKL AGA AYGV +S+FTVEGGHRAI F+RIGGVQ
Sbjct: 1 MAQN-LKDLAGRLPAGPRGMGTALKLLLGAGAVAYGVRESVFTVEGGHRAIFFNRIGGVQ 59
Query: 61 -NNVFAEGLHFRLPWFQYPIIYDIRSRPRKISSPTGSKDLQMVNISLRVLARPDASKLPK 119
+ + AEGLHFR+PWFQYPIIYDIR+RPRKISSPTGSKDLQMVNISLRVL+RP+A +LP
Sbjct: 60 QDTILAEGLHFRIPWFQYPIIYDIRARPRKISSPTGSKDLQMVNISLRVLSRPNAQELPS 119
Query: 120 MLCR 123
M R
Sbjct: 120 MYQR 123
>sp|Q2HJ97|PHB2_BOVIN Prohibitin-2 OS=Bos taurus GN=PHB2 PE=2 SV=1
Length = 299
Score = 187 bits (474), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 89/124 (71%), Positives = 103/124 (83%), Gaps = 2/124 (1%)
Query: 1 MAQSKLNDFAGRFGKGPKGVGVGLKLAALAGAAAYGVSQSMFTVEGGHRAIMFSRIGGVQ 60
MAQ+ L D AGR GP+G+G LKL AGA AYG+ +S+FTVEGGHRAI F+RIGGVQ
Sbjct: 1 MAQN-LKDLAGRLPSGPRGMGTALKLLLGAGAVAYGIRESVFTVEGGHRAIFFNRIGGVQ 59
Query: 61 -NNVFAEGLHFRLPWFQYPIIYDIRSRPRKISSPTGSKDLQMVNISLRVLARPDASKLPK 119
+ + AEGLHFR+PWFQYPIIYDIR+RPRKISSPTGSKDLQMVNISLRVL+RP+A +LP
Sbjct: 60 QDTILAEGLHFRIPWFQYPIIYDIRARPRKISSPTGSKDLQMVNISLRVLSRPNAMELPS 119
Query: 120 MLCR 123
M R
Sbjct: 120 MYQR 123
>sp|A9UMS3|PHB2_XENTR Prohibitin-2 OS=Xenopus tropicalis GN=phb2 PE=2 SV=1
Length = 301
Score = 184 bits (467), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 89/124 (71%), Positives = 102/124 (82%), Gaps = 2/124 (1%)
Query: 1 MAQSKLNDFAGRFGKGPKGVGVGLKLAALAGAAAYGVSQSMFTVEGGHRAIMFSRIGGVQ 60
MAQ+ L DFAGR GP+G+G +KL AGA AY V +S+FTVEGGHRAI F+RIGGVQ
Sbjct: 1 MAQN-LKDFAGRLPAGPRGMGTAMKLLLGAGAVAYAVKESVFTVEGGHRAIFFNRIGGVQ 59
Query: 61 -NNVFAEGLHFRLPWFQYPIIYDIRSRPRKISSPTGSKDLQMVNISLRVLARPDASKLPK 119
+ + AEGLHFR PWFQYPIIYDIR+RPRKISSPTGSKDLQMVNI+LRVL+RP AS+LP
Sbjct: 60 QDTILAEGLHFRFPWFQYPIIYDIRARPRKISSPTGSKDLQMVNITLRVLSRPLASELPF 119
Query: 120 MLCR 123
M R
Sbjct: 120 MYQR 123
>sp|Q5ZMN3|PHB2_CHICK Prohibitin-2 OS=Gallus gallus GN=PHB2 PE=2 SV=1
Length = 301
Score = 172 bits (437), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 90/124 (72%), Positives = 101/124 (81%), Gaps = 2/124 (1%)
Query: 1 MAQSKLNDFAGRFGKGPKGVGVGLKLAALAGAAAYGVSQSMFTVEGGHRAIMFSRIGGVQ 60
MAQS L D AGR GP+GVG LKL AGA AYGV +S+F VEGG RAI F+RIGGVQ
Sbjct: 1 MAQS-LKDLAGRLPAGPRGVGTALKLLLGAGALAYGVRESVFIVEGGQRAIFFNRIGGVQ 59
Query: 61 -NNVFAEGLHFRLPWFQYPIIYDIRSRPRKISSPTGSKDLQMVNISLRVLARPDASKLPK 119
+ + AEGLHFR+PWFQYPIIYDIR+RPRKISSPTGSKDLQMVNISLRVL RP+A++LP
Sbjct: 60 QDTILAEGLHFRIPWFQYPIIYDIRARPRKISSPTGSKDLQMVNISLRVLTRPNAAELPS 119
Query: 120 MLCR 123
M R
Sbjct: 120 MYQR 123
>sp|P50093|PHB2_CAEEL Mitochondrial prohibitin complex protein 2 OS=Caenorhabditis
elegans GN=phb-2 PE=1 SV=2
Length = 294
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 59/79 (74%), Positives = 69/79 (87%)
Query: 39 QSMFTVEGGHRAIMFSRIGGVQNNVFAEGLHFRLPWFQYPIIYDIRSRPRKISSPTGSKD 98
QSMFTVE GHRAIMF+RIGG+ +++ EGLHFR+PWFQYPIIYDIR+RP +I SPTGSKD
Sbjct: 38 QSMFTVEAGHRAIMFNRIGGLSTDLYKEGLHFRIPWFQYPIIYDIRARPNQIRSPTGSKD 97
Query: 99 LQMVNISLRVLARPDASKL 117
LQMVNI LRVL+RP+ L
Sbjct: 98 LQMVNIGLRVLSRPNPEHL 116
>sp|Q9ZNT7|PHB2_ARATH Prohibitin-2, mitochondrial OS=Arabidopsis thaliana GN=PHB2 PE=1
SV=1
Length = 286
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 73/105 (69%)
Query: 16 GPKGVGVGLKLAALAGAAAYGVSQSMFTVEGGHRAIMFSRIGGVQNNVFAEGLHFRLPWF 75
G + LK++ + G Y ++ S++ V+GGHRA+MF+R+ G++ V+ EG HF +PWF
Sbjct: 11 GAPALSALLKVSVIGGLGVYALTNSLYNVDGGHRAVMFNRLTGIKEKVYPEGTHFMVPWF 70
Query: 76 QYPIIYDIRSRPRKISSPTGSKDLQMVNISLRVLARPDASKLPKM 120
+ PIIYD+R+RP + S TGS DLQMV I LRVL RP +LP++
Sbjct: 71 ERPIIYDVRARPYLVESTTGSHDLQMVKIGLRVLTRPMGDRLPQI 115
>sp|O94550|PHB2_SCHPO Prohibitin-2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=phb2 PE=1 SV=2
Length = 288
Score = 119 bits (297), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 50/86 (58%), Positives = 67/86 (77%)
Query: 35 YGVSQSMFTVEGGHRAIMFSRIGGVQNNVFAEGLHFRLPWFQYPIIYDIRSRPRKISSPT 94
+ V S+F V+GGHRAI +SRIGG++N ++ EG HF +PW + I YD+R++PR ISS T
Sbjct: 39 FAVQTSLFNVDGGHRAIKYSRIGGIKNLIYPEGTHFLIPWIETAIDYDVRAKPRNISSLT 98
Query: 95 GSKDLQMVNISLRVLARPDASKLPKM 120
G+KDLQMVNI+ RVL+RPD LPK+
Sbjct: 99 GTKDLQMVNINCRVLSRPDVHALPKI 124
>sp|Q9SIL6|PHB6_ARATH Prohibitin-6, mitochondrial OS=Arabidopsis thaliana GN=PHB6 PE=1
SV=1
Length = 286
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 52/107 (48%), Positives = 78/107 (72%), Gaps = 1/107 (0%)
Query: 15 KGPKGVGVGLKLAA-LAGAAAYGVSQSMFTVEGGHRAIMFSRIGGVQNNVFAEGLHFRLP 73
K PKG G G+ A + G + YG + +++ V+GGHRAI+F+R+ G+++ V+ EG H +P
Sbjct: 7 KVPKGPGGGVIAAVVIGGLSLYGATHTLYNVDGGHRAIVFNRLVGIKDKVYPEGTHLMIP 66
Query: 74 WFQYPIIYDIRSRPRKISSPTGSKDLQMVNISLRVLARPDASKLPKM 120
WF+ PIIYD+R++P + S +GS+DLQMV I LRVL RP A +LP++
Sbjct: 67 WFERPIIYDVRAKPYLVESTSGSRDLQMVKIGLRVLTRPMADQLPEV 113
>sp|P50085|PHB2_YEAST Prohibitin-2 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=PHB2 PE=1 SV=2
Length = 310
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 47/84 (55%), Positives = 66/84 (78%)
Query: 37 VSQSMFTVEGGHRAIMFSRIGGVQNNVFAEGLHFRLPWFQYPIIYDIRSRPRKISSPTGS 96
++ ++F V+GGHRAI++SRI GV + +F EG HF PW PIIYD+R++PR ++S TG+
Sbjct: 54 INNALFNVDGGHRAIVYSRIHGVSSRIFNEGTHFIFPWLDTPIIYDVRAKPRNVASLTGT 113
Query: 97 KDLQMVNISLRVLARPDASKLPKM 120
KDLQMVNI+ RVL+RPD +LP +
Sbjct: 114 KDLQMVNITCRVLSRPDVVQLPTI 137
>sp|Q9BKU4|PHB1_CAEEL Mitochondrial prohibitin complex protein 1 OS=Caenorhabditis
elegans GN=phb-1 PE=1 SV=1
Length = 275
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 55/111 (49%), Positives = 74/111 (66%), Gaps = 12/111 (10%)
Query: 11 GRFGKGPKGVGVGLKLAALAGAAAYGVSQS-MFTVEGGHRAIMFSRIGGVQNNVFAEGLH 69
GR G VGVGL +A G++Q+ ++ V+GG RA++F R GV+N V EG H
Sbjct: 10 GRLGT----VGVGLSIAG-------GIAQTALYNVDGGQRAVIFDRFSGVKNEVVGEGTH 58
Query: 70 FRLPWFQYPIIYDIRSRPRKISSPTGSKDLQMVNISLRVLARPDASKLPKM 120
F +PW Q PII+DIRS PR +++ TGSKDLQ VNI+LR+L RP +LP +
Sbjct: 59 FLIPWVQKPIIFDIRSTPRAVTTITGSKDLQNVNITLRILHRPSPDRLPNI 109
>sp|O49460|PHB1_ARATH Prohibitin-1, mitochondrial OS=Arabidopsis thaliana GN=PHB1 PE=1
SV=1
Length = 288
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 73/102 (71%)
Query: 19 GVGVGLKLAALAGAAAYGVSQSMFTVEGGHRAIMFSRIGGVQNNVFAEGLHFRLPWFQYP 78
+ LK+ + G YG + S++ VEGGHRAIMF+R+ G+++ V+ EG H +PWF+ P
Sbjct: 14 AISTLLKVGIIGGLGLYGATHSLYNVEGGHRAIMFNRLVGIKDKVYPEGTHLMIPWFERP 73
Query: 79 IIYDIRSRPRKISSPTGSKDLQMVNISLRVLARPDASKLPKM 120
+IYD+R+RP + S +GS+DLQMV I LRVL RP A +LP++
Sbjct: 74 VIYDVRARPYLVESTSGSRDLQMVKIGLRVLTRPMADQLPEI 115
>sp|Q54Q31|PHB2_DICDI Prohibitin-2 OS=Dictyostelium discoideum GN=phbB PE=3 SV=1
Length = 293
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 48/79 (60%), Positives = 64/79 (81%)
Query: 40 SMFTVEGGHRAIMFSRIGGVQNNVFAEGLHFRLPWFQYPIIYDIRSRPRKISSPTGSKDL 99
S+ VEGGHRAI+F+R G++N V+ EG HF +PWF+ IYD+R++PR ISS TGSKDL
Sbjct: 40 SLVNVEGGHRAIVFNRFVGIKNKVYNEGTHFIVPWFERAEIYDVRAKPRSISSLTGSKDL 99
Query: 100 QMVNISLRVLARPDASKLP 118
QMVNI++RVL++P S+LP
Sbjct: 100 QMVNITIRVLSKPKVSQLP 118
>sp|Q54GI9|PHB1_DICDI Prohibitin-1, mitochondrial OS=Dictyostelium discoideum GN=phbA
PE=3 SV=1
Length = 271
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 53/104 (50%), Positives = 66/104 (63%), Gaps = 10/104 (9%)
Query: 20 VGVGLKLAALAGAAAYGVSQSMFTVEGGHRAIMFSRIGGVQNNVFAEGLHFRLPWFQYPI 79
VG GL LA SM+TV+GG RA++F RI GV+ EG HF +PW Q PI
Sbjct: 15 VGTGLSLA----------QSSMYTVDGGQRAVIFDRISGVKEKSVGEGTHFIMPWLQKPI 64
Query: 80 IYDIRSRPRKISSPTGSKDLQMVNISLRVLARPDASKLPKMLCR 123
I+DIRS PR I S TGSKDLQ V++++RVL RPD LP + +
Sbjct: 65 IFDIRSSPRNIKSDTGSKDLQTVSVTVRVLFRPDVEHLPSIFSK 108
>sp|P24156|L2CC_DROME Protein l(2)37Cc OS=Drosophila melanogaster GN=l(2)37Cc PE=2 SV=2
Length = 276
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 52/99 (52%), Positives = 70/99 (70%), Gaps = 4/99 (4%)
Query: 22 VGLKLAALAGAAAYGVSQSMFTVEGGHRAIMFSRIGGVQNNVFAEGLHFRLPWFQYPIIY 81
+GL +A L G V+ +++ VEGGHRA++F R G++ NV EG HF +PW Q PII+
Sbjct: 12 MGLGVAVLGGV----VNSALYNVEGGHRAVIFDRFTGIKENVVGEGTHFFIPWVQRPIIF 67
Query: 82 DIRSRPRKISSPTGSKDLQMVNISLRVLARPDASKLPKM 120
DIRS+PR + TGSKDLQ VNI+LR+L RP +LPK+
Sbjct: 68 DIRSQPRNVPVITGSKDLQNVNITLRILYRPIPDQLPKI 106
>sp|P35232|PHB_HUMAN Prohibitin OS=Homo sapiens GN=PHB PE=1 SV=1
Length = 272
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/100 (52%), Positives = 68/100 (68%), Gaps = 4/100 (4%)
Query: 23 GLKLAALAGAAAYGVSQSMFTVEGGHRAIMFSRIGGVQNNVFAEGLHFRLPWFQYPIIYD 82
GL LA G V+ +++ V+ GHRA++F R GVQ+ V EG HF +PW Q PII+D
Sbjct: 13 GLALAVAGGV----VNSALYNVDAGHRAVIFDRFRGVQDIVVGEGTHFLIPWVQKPIIFD 68
Query: 83 IRSRPRKISSPTGSKDLQMVNISLRVLARPDASKLPKMLC 122
RSRPR + TGSKDLQ VNI+LR+L RP AS+LP++
Sbjct: 69 CRSRPRNVPVITGSKDLQNVNITLRILFRPVASQLPRIFT 108
>sp|Q3T165|PHB_BOVIN Prohibitin OS=Bos taurus GN=PHB PE=2 SV=1
Length = 272
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/100 (52%), Positives = 68/100 (68%), Gaps = 4/100 (4%)
Query: 23 GLKLAALAGAAAYGVSQSMFTVEGGHRAIMFSRIGGVQNNVFAEGLHFRLPWFQYPIIYD 82
GL LA G V+ +++ V+ GHRA++F R GVQ+ V EG HF +PW Q PII+D
Sbjct: 13 GLALAVAGGV----VNSALYNVDAGHRAVIFDRFRGVQDIVVGEGTHFLIPWVQKPIIFD 68
Query: 83 IRSRPRKISSPTGSKDLQMVNISLRVLARPDASKLPKMLC 122
RSRPR + TGSKDLQ VNI+LR+L RP AS+LP++
Sbjct: 69 CRSRPRNVPVITGSKDLQNVNITLRILFRPVASQLPRIFT 108
>sp|P40961|PHB1_YEAST Prohibitin-1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=PHB1 PE=1 SV=2
Length = 287
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 49/103 (47%), Positives = 71/103 (68%)
Query: 18 KGVGVGLKLAALAGAAAYGVSQSMFTVEGGHRAIMFSRIGGVQNNVFAEGLHFRLPWFQY 77
K + V K+A G A G+ SM+ V+GG R ++F RI GV+ V EG HF +PW Q
Sbjct: 6 KLIDVITKVALPIGIIASGIQYSMYDVKGGSRGVIFDRINGVKQQVVGEGTHFLVPWLQK 65
Query: 78 PIIYDIRSRPRKISSPTGSKDLQMVNISLRVLARPDASKLPKM 120
IIYD+R++P+ I++ TG+KDLQMV+++LRVL RP+ +LP +
Sbjct: 66 AIIYDVRTKPKSIATNTGTKDLQMVSLTLRVLHRPEVLQLPAI 108
>sp|P67779|PHB_RAT Prohibitin OS=Rattus norvegicus GN=Phb PE=1 SV=1
Length = 272
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 52/98 (53%), Positives = 68/98 (69%), Gaps = 4/98 (4%)
Query: 23 GLKLAALAGAAAYGVSQSMFTVEGGHRAIMFSRIGGVQNNVFAEGLHFRLPWFQYPIIYD 82
GL LA G V+ +++ V+ GHRA++F R GVQ+ V EG HF +PW Q PII+D
Sbjct: 13 GLALAVAGGV----VNSALYNVDAGHRAVIFDRFRGVQDIVVGEGTHFLIPWVQKPIIFD 68
Query: 83 IRSRPRKISSPTGSKDLQMVNISLRVLARPDASKLPKM 120
RSRPR + TGSKDLQ VNI+LR+L RP AS+LP++
Sbjct: 69 CRSRPRNVPVITGSKDLQNVNITLRILFRPVASQLPRI 106
>sp|P67778|PHB_MOUSE Prohibitin OS=Mus musculus GN=Phb PE=1 SV=1
Length = 272
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 52/98 (53%), Positives = 68/98 (69%), Gaps = 4/98 (4%)
Query: 23 GLKLAALAGAAAYGVSQSMFTVEGGHRAIMFSRIGGVQNNVFAEGLHFRLPWFQYPIIYD 82
GL LA G V+ +++ V+ GHRA++F R GVQ+ V EG HF +PW Q PII+D
Sbjct: 13 GLALAVAGGV----VNSALYNVDAGHRAVIFDRFRGVQDIVVGEGTHFLIPWVQKPIIFD 68
Query: 83 IRSRPRKISSPTGSKDLQMVNISLRVLARPDASKLPKM 120
RSRPR + TGSKDLQ VNI+LR+L RP AS+LP++
Sbjct: 69 CRSRPRNVPVITGSKDLQNVNITLRILFRPVASQLPRI 106
>sp|Q9FFH5|PHB7_ARATH Prohibitin-7, mitochondrial OS=Arabidopsis thaliana GN=PHB7 PE=1
SV=1
Length = 278
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 49/97 (50%), Positives = 67/97 (69%)
Query: 24 LKLAALAGAAAYGVSQSMFTVEGGHRAIMFSRIGGVQNNVFAEGLHFRLPWFQYPIIYDI 83
LKL + G Y + SM+ V+GGHRAI+F+R G+++ V+ EG HF++P F+ IIYD+
Sbjct: 19 LKLGVIGGLGLYCIGSSMYNVDGGHRAIVFNRFTGIKDRVYPEGTHFKIPLFERAIIYDV 78
Query: 84 RSRPRKISSPTGSKDLQMVNISLRVLARPDASKLPKM 120
RSRP +S TGS DLQ V I LRVL RP +LP++
Sbjct: 79 RSRPYVENSQTGSNDLQTVTIGLRVLTRPMGDRLPEI 115
>sp|P84173|PHB_CHICK Prohibitin OS=Gallus gallus GN=PHB PE=1 SV=1
Length = 272
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 51/100 (51%), Positives = 67/100 (67%), Gaps = 4/100 (4%)
Query: 23 GLKLAALAGAAAYGVSQSMFTVEGGHRAIMFSRIGGVQNNVFAEGLHFRLPWFQYPIIYD 82
GL LA G V+ +++ V+ GHRA++F R GVQ+ V EG HF +PW Q PII+D
Sbjct: 13 GLGLAVAGGV----VNSALYNVDAGHRAVIFDRFRGVQDTVVGEGTHFLIPWVQKPIIFD 68
Query: 83 IRSRPRKISSPTGSKDLQMVNISLRVLARPDASKLPKMLC 122
RSRPR I TGSKDLQ VNI+LR+L RP ++LP++
Sbjct: 69 CRSRPRNIPVITGSKDLQNVNITLRILFRPVTAQLPRIFT 108
>sp|Q9LK25|PHB4_ARATH Prohibitin-4, mitochondrial OS=Arabidopsis thaliana GN=PHB4 PE=1
SV=1
Length = 279
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 64/88 (72%)
Query: 31 GAAAYGVSQSMFTVEGGHRAIMFSRIGGVQNNVFAEGLHFRLPWFQYPIIYDIRSRPRKI 90
G AA ++ S++TV+GG RA++F R GV + EG HF +P+ Q P IYDIR++P
Sbjct: 22 GVAATALNSSLYTVDGGERAVLFDRFRGVLDQTVGEGTHFLIPYLQTPHIYDIRTKPHTF 81
Query: 91 SSPTGSKDLQMVNISLRVLARPDASKLP 118
SS +G+KDLQMVN++LRVL RP+ S+LP
Sbjct: 82 SSKSGTKDLQMVNLTLRVLFRPEVSRLP 109
>sp|Q9P7H3|PHB1_SCHPO Prohibitin-1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=phb1 PE=3 SV=1
Length = 282
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 61/81 (75%)
Query: 40 SMFTVEGGHRAIMFSRIGGVQNNVFAEGLHFRLPWFQYPIIYDIRSRPRKISSPTGSKDL 99
S++ V GG RA++F R+ GVQ V EG HF +PW Q I+YD+R+RPR I++ TGSKDL
Sbjct: 25 SIYDVPGGKRAVLFDRLSGVQKQVVQEGTHFLIPWLQKAIVYDVRTRPRNIATTTGSKDL 84
Query: 100 QMVNISLRVLARPDASKLPKM 120
QMV+++LRVL RP+ LP++
Sbjct: 85 QMVSLTLRVLHRPEVGMLPQI 105
>sp|O04331|PHB3_ARATH Prohibitin-3, mitochondrial OS=Arabidopsis thaliana GN=PHB3 PE=1
SV=1
Length = 277
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 64/88 (72%)
Query: 31 GAAAYGVSQSMFTVEGGHRAIMFSRIGGVQNNVFAEGLHFRLPWFQYPIIYDIRSRPRKI 90
G AA ++ S+FTV+GG RA++F R GV + EG HF +P Q P I+DIR++P
Sbjct: 22 GTAATVLNTSLFTVDGGERAVIFDRFRGVMDQTVGEGTHFLIPILQRPHIFDIRTKPHTF 81
Query: 91 SSPTGSKDLQMVNISLRVLARPDASKLP 118
SS +G+KDLQMVN++LRVL+RP+ S+LP
Sbjct: 82 SSISGTKDLQMVNLTLRVLSRPEVSRLP 109
>sp|Q9LY99|PHB5_ARATH Prohibitin-5, mitochondrial OS=Arabidopsis thaliana GN=PHB5 PE=1
SV=1
Length = 249
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 42/80 (52%), Positives = 58/80 (72%)
Query: 37 VSQSMFTVEGGHRAIMFSRIGGVQNNVFAEGLHFRLPWFQYPIIYDIRSRPRKISSPTGS 96
V +MFTV+GG RA+MF R G+ EG H ++PW Q P I+DIR++P KI++ +G+
Sbjct: 20 VRSTMFTVDGGQRAVMFHRFEGILEEPVGEGTHRKIPWVQKPYIFDIRTKPYKINTDSGT 79
Query: 97 KDLQMVNISLRVLARPDASK 116
KDLQMVN++LRV+ RPD K
Sbjct: 80 KDLQMVNLTLRVMFRPDVVK 99
>sp|P86220|PHB_MESAU Prohibitin (Fragments) OS=Mesocricetus auratus GN=PHB PE=1 SV=1
Length = 87
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 15/23 (65%), Positives = 20/23 (86%)
Query: 98 DLQMVNISLRVLARPDASKLPKM 120
DLQ VNI+LR+L RP AS+LP++
Sbjct: 1 DLQNVNITLRILFRPVASQLPRI 23
>sp|Q8K915|HFLC_BUCAP Protein HflC OS=Buchnera aphidicola subsp. Schizaphis graminum
(strain Sg) GN=hflC PE=3 SV=1
Length = 307
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Query: 38 SQSMFTVEGGHRAIMFSRIGGVQNN-----VFAEGLHFRLPWFQYPIIYDIR 84
S S F V+ G R I+ ++NN V+ GLHF++P+F+ I D R
Sbjct: 17 SSSFFIVKEGERGIILQFGKVLRNNKQKTLVYTPGLHFKIPFFENVKILDSR 68
>sp|P14647|RDRP_BPQBE RNA-directed RNA polymerase beta chain OS=Enterobacteria phage
Qbeta PE=1 SV=1
Length = 589
Score = 30.8 bits (68), Expect = 2.8, Method: Composition-based stats.
Identities = 15/27 (55%), Positives = 17/27 (62%)
Query: 84 RSRPRKISSPTGSKDLQMVNISLRVLA 110
RS P KIS TG D+Q + S RVLA
Sbjct: 547 RSNPTKISRSTGKFDIQYIACSSRVLA 573
>sp|A7GKH8|PURL_BACCN Phosphoribosylformylglycinamidine synthase 2 OS=Bacillus cereus
subsp. cytotoxis (strain NVH 391-98) GN=purL PE=3 SV=1
Length = 739
Score = 29.6 bits (65), Expect = 6.0, Method: Composition-based stats.
Identities = 15/29 (51%), Positives = 18/29 (62%)
Query: 16 GPKGVGVGLKLAALAGAAAYGVSQSMFTV 44
G KG+G +KLA A AA + SQS F V
Sbjct: 652 GAKGLGATVKLAGEATAALFAESQSRFVV 680
>sp|O83074|Y031_TREPA Uncharacterized protein TP_0031 OS=Treponema pallidum (strain
Nichols) GN=TP_0031 PE=4 SV=1
Length = 92
Score = 29.3 bits (64), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 9/57 (15%)
Query: 5 KLNDFAGRFGKGPKGVGVG---LKLAALAGAAAYGVSQSM------FTVEGGHRAIM 52
+++ F FG+ P+GVGVG LKL+A G+ + +++++ F V G RA +
Sbjct: 27 RVDFFPRFFGRSPQGVGVGFARLKLSASVGSNGFRLTRAVWIFWLCFLVSGLSRAFL 83
>sp|Q58EG2|ERLN1_DANRE Erlin-1 OS=Danio rerio GN=erlin1 PE=2 SV=1
Length = 342
Score = 28.9 bits (63), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 22 VGLKLAALAGAAAYGVSQSMFTVEGGHRAIMFSRIGGVQNNVFAEGLHFRLPWF 75
VG +AA+AG A + S+ +E GH A+ + R G + + G H LP+
Sbjct: 4 VGAVVAAMAGLMAILLHSSIHKIEEGHLAVYY-RGGALLTSPNGPGYHIMLPFI 56
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.139 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,490,921
Number of Sequences: 539616
Number of extensions: 1669155
Number of successful extensions: 3766
Number of sequences better than 100.0: 37
Number of HSP's better than 100.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 3726
Number of HSP's gapped (non-prelim): 37
length of query: 124
length of database: 191,569,459
effective HSP length: 91
effective length of query: 33
effective length of database: 142,464,403
effective search space: 4701325299
effective search space used: 4701325299
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 55 (25.8 bits)