Query psy509
Match_columns 158
No_of_seqs 231 out of 1152
Neff 6.7
Searched_HMMs 29240
Date Fri Aug 16 17:02:56 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy509.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/509hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3zyq_A Hepatocyte growth facto 100.0 5.7E-30 2E-34 204.9 3.7 88 1-88 136-223 (226)
2 1dvp_A HRS, hepatocyte growth 99.9 2.7E-28 9.2E-33 194.0 3.9 87 1-87 133-219 (220)
3 1vfy_A Phosphatidylinositol-3- 99.9 6.2E-26 2.1E-30 152.3 2.6 69 20-88 2-70 (73)
4 1z2q_A LM5-1; membrane protein 99.9 5.7E-24 2E-28 146.3 4.4 73 15-87 4-79 (84)
5 1x4u_A Zinc finger, FYVE domai 99.9 6.6E-23 2.3E-27 140.9 7.0 67 21-87 3-78 (84)
6 3t7l_A Zinc finger FYVE domain 99.9 8.4E-23 2.9E-27 142.2 4.6 72 15-88 3-77 (90)
7 2yw8_A RUN and FYVE domain-con 99.9 1.4E-22 4.8E-27 138.8 4.2 67 21-89 8-77 (82)
8 1joc_A EEA1, early endosomal a 99.8 3.2E-21 1.1E-25 141.6 4.6 63 22-86 59-124 (125)
9 1wfk_A Zinc finger, FYVE domai 99.8 6.4E-21 2.2E-25 132.2 4.8 60 28-88 8-67 (88)
10 1y02_A CARP2, FYVE-ring finger 99.7 2.2E-18 7.6E-23 125.6 2.6 54 26-87 16-69 (120)
11 3mpx_A FYVE, rhogef and PH dom 99.7 1.2E-18 3.9E-23 148.8 0.0 75 12-87 355-432 (434)
12 2d3g_P Ubiquitin interacting m 98.7 4.5E-09 1.5E-13 55.5 2.4 24 134-157 1-24 (26)
13 1q0v_A Hydrophilic protein; ha 98.4 8.8E-08 3E-12 64.6 1.6 27 131-157 49-75 (81)
14 2vrw_B P95VAV, VAV1, proto-onc 97.7 7.9E-06 2.7E-10 68.9 1.3 40 23-62 348-391 (406)
15 1zbd_B Rabphilin-3A; G protein 97.3 0.00017 5.9E-09 52.9 3.6 55 28-86 54-109 (134)
16 2zet_C Melanophilin; complex, 97.1 0.00029 9.9E-09 52.8 2.9 52 28-86 67-119 (153)
17 1q0v_A Hydrophilic protein; ha 96.5 0.00071 2.4E-08 45.5 1.4 22 133-154 8-29 (81)
18 1twf_L ABC10-alpha, DNA-direct 95.8 0.0028 9.5E-08 41.5 1.2 50 1-55 1-56 (70)
19 2csz_A Synaptotagmin-like prot 95.7 0.0043 1.5E-07 41.2 2.0 48 29-84 25-73 (76)
20 3ky9_A Proto-oncogene VAV; cal 95.4 0.006 2.1E-07 53.8 2.3 34 29-62 529-563 (587)
21 1wfh_A Zinc finger (AN1-like) 95.4 0.015 5.3E-07 37.3 3.6 30 27-59 13-42 (64)
22 1wff_A Riken cDNA 2810002D23 p 95.4 0.025 8.5E-07 38.3 4.7 29 29-59 25-53 (85)
23 1wfl_A Zinc finger protein 216 93.8 0.12 4.1E-06 34.0 5.0 28 29-59 25-52 (74)
24 1wfp_A Zinc finger (AN1-like) 93.7 0.067 2.3E-06 35.2 3.7 28 29-59 25-52 (74)
25 1wg2_A Zinc finger (AN1-like) 93.4 0.081 2.8E-06 33.9 3.6 28 29-59 15-42 (64)
26 2klz_A Ataxin-3; UIM, ubiquiti 93.1 0.042 1.4E-06 33.3 1.8 18 135-152 5-22 (52)
27 1iym_A EL5; ring-H2 finger, ub 92.9 0.035 1.2E-06 33.1 1.2 36 29-64 5-40 (55)
28 1x4w_A Hypothetical protein FL 92.8 0.057 2E-06 34.9 2.2 30 29-59 15-45 (67)
29 3l11_A E3 ubiquitin-protein li 91.9 0.037 1.3E-06 38.3 0.5 53 23-86 9-61 (115)
30 2a20_A Regulating synaptic mem 91.1 0.21 7.3E-06 31.4 3.3 52 28-84 8-60 (62)
31 2ysj_A Tripartite motif-contai 91.0 0.11 3.9E-06 31.7 2.1 35 27-65 18-52 (63)
32 1z60_A TFIIH basal transcripti 90.8 0.039 1.3E-06 34.8 -0.3 31 31-62 17-47 (59)
33 2ep4_A Ring finger protein 24; 90.7 0.016 5.6E-07 36.8 -2.2 50 29-87 15-64 (74)
34 2ect_A Ring finger protein 126 90.3 0.1 3.4E-06 33.3 1.4 51 28-87 14-64 (78)
35 2ysl_A Tripartite motif-contai 90.2 0.13 4.5E-06 32.2 1.9 50 27-85 18-67 (73)
36 2ecv_A Tripartite motif-contai 90.2 0.24 8.2E-06 31.6 3.2 55 26-86 16-70 (85)
37 2e72_A POGO transposable eleme 90.1 0.065 2.2E-06 32.4 0.3 33 23-55 4-40 (49)
38 2ecn_A Ring finger protein 141 89.7 0.098 3.4E-06 32.7 0.9 47 28-87 14-60 (70)
39 2ecm_A Ring finger and CHY zin 89.6 0.19 6.4E-06 29.6 2.1 36 29-64 5-40 (55)
40 2egp_A Tripartite motif-contai 88.9 0.17 5.9E-06 32.1 1.7 53 29-86 12-64 (79)
41 2ct2_A Tripartite motif protei 87.7 0.27 9.3E-06 31.7 2.1 53 28-85 14-66 (88)
42 2klz_A Ataxin-3; UIM, ubiquiti 85.5 0.35 1.2E-05 29.2 1.5 16 134-149 24-39 (52)
43 2d8t_A Dactylidin, ring finger 85.2 0.21 7.3E-06 31.3 0.5 47 28-86 14-60 (71)
44 1jm7_B BARD1, BRCA1-associated 84.8 0.42 1.4E-05 33.0 1.9 44 29-85 22-65 (117)
45 1v87_A Deltex protein 2; ring- 84.4 0.073 2.5E-06 36.6 -2.2 57 28-87 24-94 (114)
46 2lva_A Ubiquitin carboxyl-term 84.4 0.21 7E-06 36.0 0.0 17 135-151 94-110 (129)
47 4gzn_C ZFP-57, zinc finger pro 83.8 0.39 1.3E-05 29.5 1.3 26 31-56 6-43 (60)
48 2ea6_A Ring finger protein 4; 83.7 0.32 1.1E-05 29.8 0.8 37 28-64 14-53 (69)
49 2yur_A Retinoblastoma-binding 83.5 0.77 2.6E-05 29.0 2.6 48 28-84 14-61 (74)
50 3lrq_A E3 ubiquitin-protein li 83.4 0.27 9.4E-06 33.1 0.5 47 29-85 22-68 (100)
51 2ct7_A Ring finger protein 31; 82.6 0.76 2.6E-05 30.4 2.4 32 32-63 28-61 (86)
52 2l0b_A E3 ubiquitin-protein li 82.0 0.11 3.9E-06 34.5 -2.0 48 29-85 40-87 (91)
53 3fl2_A E3 ubiquitin-protein li 81.4 0.17 5.8E-06 35.3 -1.3 47 29-86 52-98 (124)
54 3a1q_C Ubiquitin interaction m 80.6 0.72 2.5E-05 26.8 1.5 18 132-149 27-44 (45)
55 2ckl_B Ubiquitin ligase protei 80.3 0.18 6.3E-06 36.9 -1.5 46 30-85 55-100 (165)
56 2jrp_A Putative cytoplasmic pr 80.1 0.59 2E-05 31.2 1.1 56 30-87 3-63 (81)
57 2djb_A Polycomb group ring fin 79.4 0.81 2.8E-05 28.6 1.6 49 28-87 14-62 (72)
58 2y43_A E3 ubiquitin-protein li 79.1 0.23 7.9E-06 33.2 -1.2 46 30-86 23-68 (99)
59 2ecw_A Tripartite motif-contai 79.0 0.92 3.1E-05 28.7 1.8 55 26-86 16-70 (85)
60 2lv2_A Insulinoma-associated p 78.9 0.83 2.8E-05 30.0 1.6 26 30-55 29-66 (85)
61 2ecy_A TNF receptor-associated 77.8 0.22 7.4E-06 30.7 -1.5 46 29-85 15-60 (66)
62 4ayc_A E3 ubiquitin-protein li 77.8 0.31 1.1E-05 34.8 -0.9 44 30-85 54-97 (138)
63 1vd4_A Transcription initiatio 77.8 0.65 2.2E-05 27.9 0.7 25 31-55 16-49 (62)
64 3uk3_C Zinc finger protein 217 77.5 1.2 3.9E-05 25.6 1.8 25 31-55 6-42 (57)
65 2rr9_C Putative uncharacterize 77.3 1.6 5.6E-05 25.4 2.3 16 136-151 3-18 (46)
66 2rr9_C Putative uncharacterize 77.3 1 3.6E-05 26.2 1.5 20 131-150 23-42 (46)
67 2ecj_A Tripartite motif-contai 77.0 1.1 3.6E-05 26.4 1.6 33 28-64 14-46 (58)
68 1wys_A Riken cDNA 2310008M20 p 76.8 1.6 5.3E-05 28.6 2.4 29 29-60 14-44 (75)
69 1bbo_A Human enhancer-binding 76.8 1.4 4.7E-05 25.2 2.0 10 31-40 3-12 (57)
70 1x4v_A Hypothetical protein LO 76.5 1.3 4.6E-05 28.0 2.0 27 29-58 12-40 (63)
71 1bor_A Transcription factor PM 76.3 2 6.7E-05 25.6 2.7 30 29-62 6-35 (56)
72 1chc_A Equine herpes virus-1 r 76.2 1.3 4.3E-05 27.1 1.8 48 29-87 5-52 (68)
73 2lce_A B-cell lymphoma 6 prote 75.7 1.4 5E-05 26.8 2.0 26 30-55 18-55 (74)
74 1g25_A CDK-activating kinase a 75.6 0.56 1.9E-05 28.7 -0.0 51 29-86 3-54 (65)
75 1jm7_A BRCA1, breast cancer ty 75.4 0.88 3E-05 30.6 0.9 47 30-85 22-68 (112)
76 1wd2_A Ariadne-1 protein homol 75.2 2.7 9.1E-05 26.1 3.1 35 29-63 6-44 (60)
77 3a1q_C Ubiquitin interaction m 75.1 1.9 6.4E-05 25.1 2.1 17 135-151 5-21 (45)
78 2adr_A ADR1; transcription reg 75.1 1.6 5.4E-05 25.3 2.0 10 31-40 4-13 (60)
79 1x4j_A Ring finger protein 38; 75.0 0.97 3.3E-05 28.4 1.0 47 29-84 23-69 (75)
80 2ecl_A Ring-box protein 2; RNF 75.0 0.86 2.9E-05 29.4 0.8 50 28-85 14-74 (81)
81 2lcq_A Putative toxin VAPC6; P 74.4 1.1 3.7E-05 32.9 1.3 23 31-53 134-156 (165)
82 3ng2_A RNF4, snurf, ring finge 74.2 0.57 2E-05 28.9 -0.3 51 28-86 9-62 (71)
83 1rmd_A RAG1; V(D)J recombinati 73.9 0.52 1.8E-05 32.3 -0.6 48 28-86 22-69 (116)
84 2xeu_A Ring finger protein 4; 73.7 0.64 2.2E-05 27.9 -0.1 49 29-85 3-54 (64)
85 2gqj_A Zinc finger protein KIA 73.6 0.82 2.8E-05 29.9 0.4 11 30-40 25-35 (98)
86 2kiz_A E3 ubiquitin-protein li 72.9 1.2 4E-05 27.4 1.0 50 29-87 14-63 (69)
87 1p9c_A 26S proteasome non-ATPa 71.5 2 6.7E-05 25.4 1.7 23 130-152 15-37 (45)
88 3ztg_A E3 ubiquitin-protein li 71.3 1.4 4.7E-05 28.7 1.1 48 28-84 12-59 (92)
89 2ckl_A Polycomb group ring fin 71.1 0.95 3.2E-05 30.6 0.3 47 29-86 15-61 (108)
90 2csy_A Zinc finger protein 183 70.8 1.9 6.3E-05 27.4 1.7 45 29-85 15-59 (81)
91 2gmg_A Hypothetical protein PF 69.1 2.2 7.5E-05 29.7 1.8 14 56-69 87-100 (105)
92 1x5w_A Zinc finger protein 64, 69.0 2.2 7.5E-05 25.6 1.6 11 30-40 10-20 (70)
93 1wig_A KIAA1808 protein; LIM d 69.0 7.6 0.00026 24.2 4.3 15 73-87 51-65 (73)
94 4ayb_P DNA-directed RNA polyme 68.4 2.3 7.9E-05 25.4 1.5 24 31-54 5-32 (48)
95 1t1h_A Gspef-atpub14, armadill 67.8 1.2 4E-05 28.1 0.1 46 29-85 8-53 (78)
96 1x6e_A Zinc finger protein 24; 67.6 2.4 8.2E-05 25.7 1.6 11 30-40 15-25 (72)
97 3j20_Y 30S ribosomal protein S 67.1 2.2 7.5E-05 25.6 1.3 26 30-55 20-47 (50)
98 2cot_A Zinc finger protein 435 67.0 3 0.0001 25.5 2.0 11 30-40 19-29 (77)
99 2eps_A POZ-, at HOOK-, and zin 66.1 2.6 8.9E-05 24.1 1.5 11 30-40 13-23 (54)
100 2ea5_A Cell growth regulator w 66.0 2 6.9E-05 26.9 1.0 46 27-88 13-59 (68)
101 3hct_A TNF receptor-associated 65.2 2.1 7.1E-05 29.4 1.0 33 28-64 17-49 (118)
102 2fc7_A ZZZ3 protein; structure 64.8 4.4 0.00015 26.6 2.6 38 24-62 16-57 (82)
103 2d9h_A Zinc finger protein 692 64.5 2.6 8.9E-05 25.8 1.3 10 31-40 9-18 (78)
104 4a0k_B E3 ubiquitin-protein li 64.4 1.6 5.4E-05 30.8 0.3 49 28-84 47-109 (117)
105 1e4u_A Transcriptional repress 63.3 3.4 0.00012 26.6 1.8 52 28-87 10-62 (78)
106 2ctd_A Zinc finger protein 512 62.8 2.4 8.1E-05 27.9 0.9 10 31-40 36-46 (96)
107 3knv_A TNF receptor-associated 62.5 1.3 4.6E-05 31.8 -0.4 45 30-85 32-76 (141)
108 2ctu_A Zinc finger protein 483 61.1 1.5 5.1E-05 26.2 -0.3 25 31-55 20-49 (73)
109 2jne_A Hypothetical protein YF 61.0 3.5 0.00012 28.4 1.5 33 30-62 33-70 (101)
110 1z6u_A NP95-like ring finger p 59.5 2.2 7.5E-05 30.9 0.3 46 30-86 79-124 (150)
111 2ct1_A Transcriptional repress 58.0 4.5 0.00015 24.6 1.6 11 30-40 16-26 (77)
112 2dmd_A Zinc finger protein 64, 57.5 4.4 0.00015 25.5 1.5 25 31-55 10-46 (96)
113 4ap4_A E3 ubiquitin ligase RNF 57.0 2 6.8E-05 29.4 -0.3 49 29-85 72-123 (133)
114 1vq8_Z 50S ribosomal protein L 56.8 3.6 0.00012 27.3 1.0 29 30-58 28-58 (83)
115 2y1n_A E3 ubiquitin-protein li 56.6 1.1 3.8E-05 38.0 -2.0 47 30-87 333-379 (389)
116 1llm_C Chimera of ZIF23-GCN4; 56.6 4.2 0.00014 25.5 1.3 25 31-55 5-41 (88)
117 2kdx_A HYPA, hydrogenase/ureas 56.2 4.3 0.00015 28.2 1.4 23 31-53 75-98 (119)
118 1yx4_A 26S proteasome non-ATPa 55.7 2.5 8.4E-05 30.6 0.0 20 133-152 106-125 (132)
119 1wfe_A Riken cDNA 2310008M20 p 55.1 4.7 0.00016 26.9 1.4 28 29-59 25-54 (86)
120 2epr_A POZ-, at HOOK-, and zin 54.6 4.2 0.00015 22.4 1.0 10 31-40 14-23 (48)
121 3t6p_A Baculoviral IAP repeat- 54.4 6.4 0.00022 32.6 2.4 43 29-87 295-338 (345)
122 4ic3_A E3 ubiquitin-protein li 54.1 2.8 9.5E-05 26.4 0.1 42 29-86 24-66 (74)
123 4b4t_W RPN10, 26S proteasome r 54.0 2.7 9.2E-05 33.7 0.0 22 134-155 222-243 (268)
124 1pft_A TFIIB, PFTFIIBN; N-term 53.6 5.1 0.00017 23.4 1.2 25 31-55 7-34 (50)
125 2drp_A Protein (tramtrack DNA- 53.2 6 0.00021 23.1 1.6 10 31-40 12-21 (66)
126 2kmk_A Zinc finger protein GFI 53.0 5.5 0.00019 24.1 1.4 10 31-40 3-12 (82)
127 2kvh_A Zinc finger and BTB dom 52.6 5 0.00017 18.8 0.9 12 44-55 2-13 (27)
128 2lt7_A Transcriptional regulat 52.5 4.8 0.00016 28.1 1.1 25 31-55 24-60 (133)
129 2jmo_A Parkin; IBR, E3 ligase, 52.5 5.3 0.00018 25.9 1.3 37 24-63 25-68 (80)
130 3cc2_Z 50S ribosomal protein L 52.0 4.8 0.00016 28.5 1.0 28 31-58 62-91 (116)
131 1a1h_A QGSR zinc finger peptid 51.3 5.9 0.0002 24.5 1.3 7 34-40 11-17 (90)
132 1yx4_A 26S proteasome non-ATPa 51.0 5.6 0.00019 28.7 1.3 20 135-154 37-56 (132)
133 3na7_A HP0958; flagellar bioge 50.9 7.3 0.00025 30.5 2.1 29 27-55 196-232 (256)
134 1ard_A Yeast transcription fac 50.5 5.2 0.00018 18.8 0.8 10 46-55 3-12 (29)
135 3j21_g 50S ribosomal protein L 50.2 6.3 0.00022 23.8 1.2 23 30-54 15-37 (51)
136 2wbt_A B-129; zinc finger; 2.7 49.8 5.2 0.00018 26.8 1.0 11 45-55 74-84 (129)
137 1wil_A KIAA1045 protein; ring 49.5 8.4 0.00029 25.9 1.9 33 28-62 14-46 (89)
138 2m0d_A Zinc finger and BTB dom 49.4 5.9 0.0002 18.6 0.9 13 44-56 2-14 (30)
139 3j21_i 50S ribosomal protein L 49.4 6.8 0.00023 26.1 1.4 26 30-57 36-65 (83)
140 3jyw_9 60S ribosomal protein L 49.3 7.9 0.00027 25.1 1.7 25 30-56 27-55 (72)
141 2epq_A POZ-, at HOOK-, and zin 49.1 6.4 0.00022 21.2 1.1 11 30-40 11-21 (45)
142 2dmi_A Teashirt homolog 3; zin 48.7 8.2 0.00028 25.2 1.8 9 31-39 21-29 (115)
143 2yt9_A Zinc finger-containing 48.6 7.7 0.00026 24.2 1.6 10 31-40 9-18 (95)
144 1f2i_G Fusion of N-terminal 17 48.3 7.1 0.00024 23.3 1.3 26 30-55 20-59 (73)
145 2ee8_A Protein ODD-skipped-rel 48.2 17 0.00057 23.2 3.3 26 30-55 18-55 (106)
146 2kvf_A Zinc finger and BTB dom 48.1 6.5 0.00022 18.4 0.9 12 44-55 2-13 (28)
147 2dip_A Zinc finger SWIM domain 48.0 17 0.00059 24.6 3.3 37 23-60 25-62 (98)
148 1rik_A E6APC1 peptide; E6-bind 47.9 6.6 0.00023 18.5 0.9 11 45-55 2-12 (29)
149 2dlq_A GLI-kruppel family memb 47.7 8.9 0.0003 25.1 1.9 10 31-40 9-18 (124)
150 3iz5_m 60S ribosomal protein L 47.7 8.2 0.00028 26.1 1.6 27 30-58 37-67 (92)
151 2gmg_A Hypothetical protein PF 47.2 8.4 0.00029 26.7 1.7 14 42-55 64-77 (105)
152 1wjp_A Zinc finger protein 295 46.9 8.7 0.0003 24.8 1.7 26 30-55 17-52 (107)
153 2csh_A Zinc finger protein 297 46.9 8.4 0.00029 24.9 1.6 24 31-55 12-47 (110)
154 2m0e_A Zinc finger and BTB dom 46.8 7 0.00024 18.1 0.9 10 46-55 3-12 (29)
155 1wim_A KIAA0161 protein; ring 46.7 4.9 0.00017 26.2 0.4 34 30-64 6-39 (94)
156 2lvu_A Zinc finger and BTB dom 52.1 4.2 0.00014 18.9 0.0 11 45-55 2-12 (26)
157 2fiy_A Protein FDHE homolog; F 46.2 5.2 0.00018 32.7 0.5 67 24-91 178-269 (309)
158 2m0f_A Zinc finger and BTB dom 45.9 7.3 0.00025 18.1 0.9 11 45-55 2-12 (29)
159 3dpl_R Ring-box protein 1; ubi 45.6 2.8 9.5E-05 28.8 -1.0 49 28-84 36-98 (106)
160 4hc9_A Trans-acting T-cell-spe 45.5 15 0.00051 25.6 2.8 34 53-87 59-92 (115)
161 2kvg_A Zinc finger and BTB dom 45.4 6.4 0.00022 18.6 0.6 12 44-55 2-13 (27)
162 2dlk_A Novel protein; ZF-C2H2 45.0 7.7 0.00026 23.4 1.1 6 35-40 15-20 (79)
163 1x6h_A Transcriptional repress 44.9 8.8 0.0003 23.4 1.4 11 30-40 16-26 (86)
164 3izc_m 60S ribosomal protein R 44.5 10 0.00035 25.7 1.7 26 30-57 37-66 (92)
165 3h0g_L DNA-directed RNA polyme 44.2 14 0.00047 23.2 2.2 25 29-53 21-46 (63)
166 3c5k_A HD6, histone deacetylas 43.9 11 0.00038 26.0 1.9 26 29-58 24-49 (109)
167 3f6q_B LIM and senescent cell 43.8 19 0.00064 21.6 2.8 53 29-85 11-70 (72)
168 6rxn_A Rubredoxin; electron tr 43.6 7.3 0.00025 22.9 0.8 13 44-56 3-15 (46)
169 1tot_A CREB-binding protein; z 43.4 3.9 0.00013 24.6 -0.5 20 31-53 8-27 (52)
170 4gne_A Histone-lysine N-methyl 43.2 24 0.00083 24.2 3.6 35 25-64 53-88 (107)
171 2els_A Zinc finger protein 406 42.1 9.1 0.00031 19.2 1.0 13 44-56 8-20 (36)
172 3a43_A HYPD, hydrogenase nicke 42.0 8.5 0.00029 27.6 1.1 10 32-41 73-82 (139)
173 1klr_A Zinc finger Y-chromosom 41.7 8 0.00027 18.1 0.7 10 46-55 3-12 (30)
174 1paa_A Yeast transcription fac 41.4 8.7 0.0003 18.2 0.8 10 46-55 3-12 (30)
175 2c2l_A CHIP, carboxy terminus 41.3 9.8 0.00033 29.1 1.4 31 30-64 209-239 (281)
176 2k4x_A 30S ribosomal protein S 41.2 12 0.00041 22.7 1.5 26 30-55 19-46 (55)
177 1yk4_A Rubredoxin, RD; electro 41.1 8.3 0.00028 23.2 0.8 14 44-57 1-14 (52)
178 2dar_A PDZ and LIM domain prot 40.6 41 0.0014 21.4 4.3 55 29-87 25-84 (90)
179 2apo_B Ribosome biogenesis pro 39.8 17 0.00058 22.6 2.1 24 30-57 7-30 (60)
180 2ghf_A ZHX1, zinc fingers and 39.0 7.4 0.00025 26.1 0.3 10 31-40 20-29 (102)
181 2elx_A Zinc finger protein 406 38.9 11 0.00037 18.6 0.9 12 44-55 6-17 (35)
182 2elr_A Zinc finger protein 406 38.2 10 0.00035 18.9 0.8 12 44-55 8-19 (36)
183 1gh9_A 8.3 kDa protein (gene M 38.1 10 0.00034 24.4 0.8 23 31-55 6-30 (71)
184 2lvt_A Zinc finger and BTB dom 44.0 6.8 0.00023 18.5 0.0 11 46-56 3-13 (29)
185 1znf_A 31ST zinc finger from X 37.7 12 0.00039 17.2 0.9 10 31-40 3-12 (27)
186 2dj7_A Actin-binding LIM prote 37.1 56 0.0019 20.4 4.4 60 23-87 9-74 (80)
187 1x4l_A Skeletal muscle LIM-pro 36.8 39 0.0013 20.3 3.6 14 73-86 54-67 (72)
188 1k81_A EIF-2-beta, probable tr 36.5 9.8 0.00033 21.0 0.5 24 31-54 2-30 (36)
189 1e8j_A Rubredoxin; iron-sulfur 35.8 10 0.00035 22.7 0.6 13 44-56 2-14 (52)
190 4a17_Y RPL37A, 60S ribosomal p 35.7 11 0.00039 26.0 0.9 10 76-85 55-64 (103)
191 2elv_A Zinc finger protein 406 35.6 13 0.00046 18.5 1.0 12 44-55 8-19 (36)
192 2elt_A Zinc finger protein 406 35.6 13 0.00045 18.5 0.9 12 44-55 8-19 (36)
193 2elo_A Zinc finger protein 406 35.5 10 0.00034 19.2 0.4 12 44-55 8-19 (37)
194 1srk_A Zinc finger protein ZFP 35.4 13 0.00045 18.4 0.9 13 44-56 6-18 (35)
195 2v3b_B Rubredoxin 2, rubredoxi 35.2 11 0.00039 22.8 0.7 14 44-57 2-15 (55)
196 1dl6_A Transcription factor II 35.2 36 0.0012 20.6 3.1 7 31-37 13-19 (58)
197 2ecg_A Baculoviral IAP repeat- 34.7 10 0.00035 23.6 0.5 42 29-86 25-67 (75)
198 2elu_A Zinc finger protein 406 34.1 11 0.00036 20.8 0.4 13 43-55 7-19 (37)
199 4a18_A RPL37, ribosomal protei 34.1 15 0.00051 24.9 1.2 7 48-54 19-25 (94)
200 1rim_A E6APC2 peptide; E6-bind 34.0 12 0.00043 18.6 0.7 10 46-55 3-12 (33)
201 1vq8_1 50S ribosomal protein L 33.7 13 0.00046 22.9 0.8 7 48-54 20-26 (57)
202 2ej4_A Zinc finger protein ZIC 33.4 18 0.0006 22.5 1.5 11 30-40 26-36 (95)
203 2elp_A Zinc finger protein 406 33.4 15 0.00051 18.5 0.9 12 44-55 8-19 (37)
204 2kfq_A FP1; protein, de novo p 33.3 10 0.00034 18.8 0.2 11 46-56 3-13 (32)
205 2elq_A Zinc finger protein 406 33.1 15 0.00052 18.3 0.9 12 44-55 8-19 (36)
206 2lvr_A Zinc finger and BTB dom 39.2 9.1 0.00031 18.0 0.0 12 45-56 3-14 (30)
207 4rxn_A Rubredoxin; electron tr 32.6 14 0.00047 22.4 0.8 14 44-57 2-15 (54)
208 1p7a_A BF3, BKLF, kruppel-like 32.4 15 0.00051 18.4 0.8 12 44-55 10-21 (37)
209 2d8v_A Zinc finger FYVE domain 32.2 18 0.00061 23.0 1.3 25 32-61 11-36 (67)
210 2kwq_A Protein MCM10 homolog; 32.2 15 0.00052 24.8 1.0 33 21-54 36-74 (92)
211 2d9k_A FLN29 gene product; zin 32.0 10 0.00035 23.5 0.1 31 31-61 19-51 (75)
212 3iuf_A Zinc finger protein UBI 32.0 15 0.00053 20.2 0.9 14 43-56 5-18 (48)
213 3vth_A Hydrogenase maturation 32.0 26 0.00087 32.1 2.8 12 30-41 134-145 (761)
214 2i13_A AART; DNA binding, zinc 31.8 15 0.00052 26.1 1.1 10 31-40 23-32 (190)
215 3hcs_A TNF receptor-associated 31.7 11 0.00038 27.1 0.3 32 29-64 18-49 (170)
216 1ffk_W Ribosomal protein L37AE 31.6 19 0.00065 23.2 1.4 26 30-57 28-57 (73)
217 3iz5_l 60S ribosomal protein L 31.4 27 0.00094 23.6 2.2 7 48-54 19-25 (94)
218 1qxf_A GR2, 30S ribosomal prot 31.3 22 0.00076 22.5 1.6 27 31-57 9-38 (66)
219 3k1f_M Transcription initiatio 31.2 21 0.00072 27.2 1.7 34 22-55 10-52 (197)
220 1ovx_A ATP-dependent CLP prote 31.2 20 0.00068 22.8 1.4 18 74-91 39-56 (67)
221 3j21_e 50S ribosomal protein L 30.3 19 0.00064 22.6 1.1 7 48-54 20-26 (62)
222 2d8x_A Protein pinch; LIM doma 30.3 88 0.003 18.5 4.4 15 73-87 50-64 (70)
223 2elm_A Zinc finger protein 406 30.2 18 0.0006 18.4 0.9 13 44-56 8-20 (37)
224 2jun_A Midline-1; B-BOX, TRIM, 30.2 13 0.00044 24.4 0.4 32 30-62 4-35 (101)
225 3j20_W 30S ribosomal protein S 30.1 24 0.00083 22.2 1.6 27 31-57 17-46 (63)
226 2epa_A Krueppel-like factor 10 30.0 39 0.0013 19.7 2.7 12 29-40 17-30 (72)
227 2lk0_A RNA-binding protein 5; 29.6 20 0.00069 19.1 1.1 20 32-53 8-27 (32)
228 1njq_A Superman protein; zinc- 28.8 19 0.00066 18.4 0.9 12 44-55 5-16 (39)
229 2e5r_A Dystrobrevin alpha; ZZ 28.7 25 0.00087 21.6 1.6 22 30-52 12-33 (63)
230 2yrk_A Zinc finger homeobox pr 27.9 18 0.00062 22.1 0.7 12 29-40 13-24 (55)
231 2dkt_A Ring finger and CHY zin 27.9 37 0.0013 24.7 2.5 32 26-60 55-90 (143)
232 2l3k_A Rhombotin-2, linker, LI 27.8 49 0.0017 22.4 3.1 15 73-87 56-70 (123)
233 2epv_A Zinc finger protein 268 27.7 21 0.00071 18.9 0.9 13 43-55 10-22 (44)
234 2yho_A E3 ubiquitin-protein li 27.7 12 0.00042 23.8 -0.1 44 29-88 18-62 (79)
235 3vk6_A E3 ubiquitin-protein li 27.6 13 0.00044 25.6 -0.0 49 30-88 2-50 (101)
236 2xoc_A E3 ubiquitin-protein li 27.4 22 0.00076 28.4 1.3 26 31-56 81-115 (261)
237 2jsp_A Transcriptional regulat 27.2 13 0.00044 24.9 -0.0 15 29-43 21-35 (87)
238 2xzm_6 RPS27E; ribosome, trans 27.0 28 0.00097 22.9 1.6 27 31-57 34-63 (81)
239 2hf1_A Tetraacyldisaccharide-1 27.0 25 0.00085 22.2 1.3 14 29-42 8-21 (68)
240 2k1p_A Zinc finger RAN-binding 26.9 33 0.0011 18.4 1.6 21 31-53 8-28 (33)
241 1ubd_C Protein (YY1 zinc finge 26.8 24 0.00084 23.0 1.3 7 34-40 12-18 (124)
242 2jr6_A UPF0434 protein NMA0874 26.7 25 0.00086 22.2 1.3 28 28-61 7-34 (68)
243 4bbr_M Transcription initiatio 26.6 24 0.00084 28.8 1.5 36 22-57 10-54 (345)
244 1dx8_A Rubredoxin; electron tr 26.5 20 0.00068 22.8 0.8 15 43-57 5-19 (70)
245 2d8s_A Cellular modulator of i 26.5 12 0.0004 24.2 -0.3 54 28-87 14-70 (80)
246 2ayj_A 50S ribosomal protein L 26.3 22 0.00077 21.8 0.9 22 30-53 20-41 (56)
247 2zkr_2 60S ribosomal protein L 26.3 25 0.00087 23.9 1.3 22 31-53 18-39 (97)
248 2ab3_A ZNF29; zinc finger prot 26.1 20 0.0007 16.4 0.7 10 46-55 3-14 (29)
249 2epc_A Zinc finger protein 32; 26.1 24 0.00082 18.1 1.0 12 44-55 10-21 (42)
250 2d8y_A Eplin protein; LIM doma 26.1 1E+02 0.0034 19.5 4.3 55 29-87 15-75 (91)
251 2emi_A Zinc finger protein 484 26.1 24 0.00081 18.7 1.0 14 43-56 10-23 (46)
252 2ept_A Zinc finger protein 32; 26.1 23 0.0008 18.2 0.9 13 43-55 8-20 (41)
253 1x61_A Thyroid receptor intera 26.0 62 0.0021 19.3 3.1 15 73-87 52-66 (72)
254 3iz6_X 40S ribosomal protein S 25.9 28 0.00097 23.2 1.5 27 31-57 38-67 (86)
255 3cw2_K Translation initiation 25.7 27 0.00091 25.2 1.4 23 31-53 105-132 (139)
256 3h0g_I DNA-directed RNA polyme 25.7 35 0.0012 23.4 2.0 28 55-82 6-33 (113)
257 2eow_A Zinc finger protein 347 25.5 24 0.00081 18.6 0.9 14 43-56 10-23 (46)
258 2yrj_A Zinc finger protein 473 25.3 25 0.00086 18.5 1.0 13 43-55 10-22 (46)
259 2enf_A Zinc finger protein 347 25.3 23 0.0008 18.7 0.9 13 43-55 10-22 (46)
260 2vje_A E3 ubiquitin-protein li 25.1 15 0.00052 22.2 0.0 34 28-63 7-41 (64)
261 2ytp_A Zinc finger protein 484 25.1 26 0.00087 18.6 1.0 13 43-55 10-22 (46)
262 2yrm_A B-cell lymphoma 6 prote 24.9 25 0.00086 18.5 0.9 13 43-55 8-20 (43)
263 2ytf_A Zinc finger protein 268 24.8 26 0.00089 18.5 1.0 14 43-56 10-23 (46)
264 2yts_A Zinc finger protein 484 24.8 25 0.00086 18.5 0.9 14 43-56 10-23 (46)
265 2jox_A Churchill protein; zinc 24.7 27 0.00091 24.1 1.2 27 29-55 26-67 (106)
266 2ds5_A CLPX, ATP-dependent CLP 24.6 30 0.001 20.6 1.3 15 74-88 32-46 (51)
267 2pk7_A Uncharacterized protein 24.6 31 0.001 21.8 1.4 13 29-41 8-20 (69)
268 1n0z_A ZNF265; zinc finger, RN 24.4 76 0.0026 18.2 3.0 21 31-53 16-38 (45)
269 2enh_A Zinc finger protein 28 24.4 25 0.00085 18.7 0.8 14 43-56 10-23 (46)
270 2eos_A B-cell lymphoma 6 prote 24.3 26 0.0009 18.1 0.9 12 44-55 10-21 (42)
271 2ytb_A Zinc finger protein 32; 24.3 26 0.00088 18.0 0.9 13 44-56 10-22 (42)
272 3ifu_A Non-structural protein; 24.3 32 0.0011 25.2 1.6 18 50-67 19-36 (180)
273 1s24_A Rubredoxin 2; electron 24.3 21 0.00072 23.8 0.6 16 42-57 32-47 (87)
274 1fv5_A First zinc finger of U- 24.2 21 0.0007 19.3 0.4 14 43-56 6-19 (36)
275 2emb_A Zinc finger protein 473 24.2 27 0.00092 18.3 1.0 13 44-56 11-23 (44)
276 2jny_A Uncharacterized BCR; st 24.1 30 0.001 21.8 1.3 15 28-42 9-23 (67)
277 2eon_A ZFP-95, zinc finger pro 24.1 25 0.00085 18.7 0.8 13 43-55 10-22 (46)
278 2eor_A Zinc finger protein 224 24.1 27 0.00093 18.4 1.0 13 43-55 10-22 (46)
279 2en2_A B-cell lymphoma 6 prote 24.0 28 0.00094 17.9 1.0 12 44-55 10-21 (42)
280 2yu5_A Zinc finger protein 473 23.9 27 0.00092 18.3 0.9 14 43-56 10-23 (44)
281 2ct0_A Non-SMC element 1 homol 23.9 14 0.00047 23.7 -0.4 47 29-84 15-61 (74)
282 2el5_A Zinc finger protein 268 23.8 28 0.00096 17.9 1.0 12 44-55 9-20 (42)
283 2emj_A Zinc finger protein 28 23.7 28 0.00096 18.4 1.0 13 43-55 10-22 (46)
284 2eq2_A Zinc finger protein 347 23.7 24 0.00083 18.7 0.7 13 43-55 10-22 (46)
285 1d4u_A Nucleotide excision rep 23.7 44 0.0015 23.2 2.2 11 74-84 25-35 (111)
286 2eoy_A Zinc finger protein 473 23.7 27 0.00093 18.5 0.9 14 43-56 10-23 (46)
287 1j0t_A MIH, MOLT-inhibiting ho 23.6 17 0.00057 23.8 -0.0 15 73-87 20-34 (78)
288 2kr4_A Ubiquitin conjugation f 23.6 19 0.00066 23.0 0.3 29 30-62 15-43 (85)
289 2eq0_A Zinc finger protein 347 23.5 28 0.00096 18.4 1.0 14 43-56 10-23 (46)
290 2eou_A Zinc finger protein 473 23.5 25 0.00084 18.5 0.7 12 44-55 11-22 (44)
291 2eom_A ZFP-95, zinc finger pro 23.4 25 0.00085 18.7 0.7 12 44-55 11-22 (46)
292 1yui_A GAGA-factor; complex (D 23.4 27 0.00092 19.4 0.9 12 44-55 23-34 (54)
293 2ep3_A Zinc finger protein 484 23.4 29 0.00098 18.3 1.0 14 43-56 10-23 (46)
294 2kpi_A Uncharacterized protein 23.3 32 0.0011 20.8 1.2 26 28-61 9-36 (56)
295 2em4_A Zinc finger protein 28 23.3 29 0.00099 18.4 1.0 13 43-55 10-22 (46)
296 2yti_A Zinc finger protein 347 23.2 25 0.00086 18.6 0.7 13 43-55 10-22 (46)
297 2en9_A Zinc finger protein 28 23.2 27 0.00092 18.5 0.8 13 43-55 10-22 (46)
298 3u5c_b RP61, YS20, 40S ribosom 23.2 33 0.0011 22.6 1.4 27 31-57 36-65 (82)
299 2enc_A Zinc finger protein 224 23.2 29 0.001 18.3 1.0 13 43-55 10-22 (46)
300 2em7_A Zinc finger protein 224 23.1 29 0.001 18.3 1.0 14 43-56 10-23 (46)
301 1x4k_A Skeletal muscle LIM-pro 23.1 50 0.0017 19.7 2.2 54 30-87 6-66 (72)
302 2jp9_A Wilms tumor 1; DNA bind 23.1 32 0.0011 22.1 1.3 25 31-55 38-76 (119)
303 2yte_A Zinc finger protein 473 23.0 27 0.00094 17.9 0.8 12 44-55 9-20 (42)
304 2aus_D NOP10, ribosome biogene 23.0 40 0.0014 20.9 1.6 27 31-61 7-33 (60)
305 2eq1_A Zinc finger protein 347 22.9 25 0.00087 18.6 0.7 12 44-55 11-22 (46)
306 2ep1_A Zinc finger protein 484 22.8 26 0.00089 18.5 0.7 12 44-55 11-22 (46)
307 2yth_A Zinc finger protein 224 22.7 28 0.00096 18.4 0.9 12 44-55 11-22 (46)
308 2yu8_A Zinc finger protein 347 22.7 30 0.001 18.2 1.0 14 43-56 10-23 (46)
309 2em3_A Zinc finger protein 28 22.6 29 0.001 18.3 0.9 13 43-55 10-22 (46)
310 2yso_A ZFP-95, zinc finger pro 22.6 30 0.001 18.3 1.0 14 43-56 10-23 (46)
311 2ema_A Zinc finger protein 347 22.6 31 0.001 18.2 1.0 14 43-56 10-23 (46)
312 2ep0_A Zinc finger protein 28 22.5 31 0.001 18.2 1.0 14 43-56 10-23 (46)
313 2emy_A Zinc finger protein 268 22.5 31 0.0011 18.2 1.0 14 43-56 10-23 (46)
314 2em9_A Zinc finger protein 224 22.4 30 0.001 18.2 0.9 14 43-56 10-23 (46)
315 2en7_A Zinc finger protein 268 22.4 26 0.00088 18.2 0.6 12 44-55 11-22 (44)
316 2ene_A Zinc finger protein 347 22.3 31 0.0011 18.2 1.0 14 43-56 10-23 (46)
317 2em8_A Zinc finger protein 224 22.2 31 0.0011 18.2 1.0 13 43-55 10-22 (46)
318 2yto_A Zinc finger protein 484 22.2 31 0.0011 18.2 1.0 14 43-56 10-23 (46)
319 1x6a_A LIMK-2, LIM domain kina 22.2 1.3E+02 0.0043 18.4 4.1 15 73-87 62-76 (81)
320 4b6d_A RAC GTPase-activating p 22.1 35 0.0012 20.8 1.3 30 30-59 20-49 (61)
321 2em5_A ZFP-95, zinc finger pro 22.1 32 0.0011 18.2 1.0 14 43-56 10-23 (46)
322 2epz_A Zinc finger protein 28 22.1 30 0.001 18.2 0.9 13 43-55 10-22 (46)
323 2emx_A Zinc finger protein 268 22.0 32 0.0011 17.9 1.0 13 43-55 8-20 (44)
324 2ytk_A Zinc finger protein 347 22.0 32 0.0011 18.1 1.0 13 43-55 10-22 (46)
325 2em2_A Zinc finger protein 28 22.0 32 0.0011 18.2 1.0 13 43-55 10-22 (46)
326 1sp2_A SP1F2; zinc finger, tra 22.0 30 0.001 16.4 0.8 10 46-55 3-14 (31)
327 2eoo_A ZFP-95, zinc finger pro 21.9 31 0.0011 18.3 0.9 13 43-55 10-22 (46)
328 2em6_A Zinc finger protein 224 21.9 30 0.001 18.3 0.9 14 43-56 10-23 (46)
329 2eoz_A Zinc finger protein 473 21.8 27 0.00091 18.5 0.6 14 43-56 10-23 (46)
330 2emf_A Zinc finger protein 484 21.8 32 0.0011 18.2 1.0 14 43-56 10-23 (46)
331 2ytn_A Zinc finger protein 347 21.8 30 0.001 18.3 0.8 13 43-55 10-22 (46)
332 2j7j_A Transcription factor II 21.7 36 0.0012 20.2 1.3 7 33-39 7-13 (85)
333 2epu_A Zinc finger protein 32; 21.7 27 0.00092 18.4 0.6 14 43-56 10-23 (45)
334 2elz_A Zinc finger protein 224 21.7 29 0.001 18.4 0.8 13 43-55 10-22 (46)
335 2ebt_A Krueppel-like factor 5; 21.7 38 0.0013 21.0 1.5 26 30-55 16-57 (100)
336 3j20_P 30S ribosomal protein S 21.7 84 0.0029 19.1 2.9 22 62-87 27-48 (56)
337 2kn9_A Rubredoxin; metalloprot 21.6 27 0.00093 22.9 0.7 15 43-57 25-39 (81)
338 2eoh_A Zinc finger protein 28 21.6 29 0.00098 18.4 0.7 12 44-55 11-22 (46)
339 2ytj_A Zinc finger protein 484 21.6 33 0.0011 18.1 1.0 14 43-56 10-23 (46)
340 1zfd_A SWI5; DNA binding motif 21.6 31 0.0011 16.4 0.8 12 44-55 2-15 (32)
341 2en3_A ZFP-95, zinc finger pro 21.6 32 0.0011 18.1 0.9 14 43-56 10-23 (46)
342 2ytr_A Zinc finger protein 347 21.5 27 0.00093 18.4 0.6 13 43-55 10-22 (46)
343 2eq3_A Zinc finger protein 347 21.5 26 0.00087 18.5 0.5 13 43-55 10-22 (46)
344 2co8_A NEDD9 interacting prote 21.5 1.1E+02 0.0036 19.0 3.6 18 23-40 9-26 (82)
345 2k2d_A Ring finger and CHY zin 21.4 27 0.00091 22.7 0.7 12 30-41 38-49 (79)
346 2eof_A Zinc finger protein 268 21.4 33 0.0011 17.7 1.0 13 43-55 10-22 (44)
347 2eop_A Zinc finger protein 268 21.3 30 0.001 18.2 0.8 13 43-55 10-22 (46)
348 2el4_A Zinc finger protein 268 21.3 34 0.0012 18.0 1.0 14 43-56 10-23 (46)
349 2epw_A Zinc finger protein 268 21.3 32 0.0011 18.0 0.9 15 43-57 10-24 (46)
350 2yqq_A Zinc finger HIT domain- 21.3 46 0.0016 20.3 1.7 23 30-57 13-35 (56)
351 1nee_A EIF-2-beta, probable tr 21.2 31 0.001 24.9 1.0 23 31-53 104-131 (138)
352 2emg_A Zinc finger protein 484 21.2 31 0.0011 18.2 0.8 12 44-55 11-22 (46)
353 2ytq_A Zinc finger protein 268 21.2 32 0.0011 18.2 0.9 13 43-55 10-22 (46)
354 2eml_A Zinc finger protein 28 21.2 34 0.0012 18.0 1.0 14 43-56 10-23 (46)
355 2emh_A Zinc finger protein 484 21.1 32 0.0011 18.1 0.9 14 43-56 10-23 (46)
356 2eme_A Zinc finger protein 473 21.1 34 0.0012 18.0 1.0 13 43-55 10-22 (46)
357 2el6_A Zinc finger protein 268 21.1 34 0.0012 18.1 1.0 14 43-56 10-23 (46)
358 2d74_B Translation initiation 21.0 42 0.0014 24.4 1.7 23 31-53 106-133 (148)
359 2emp_A Zinc finger protein 347 20.9 35 0.0012 18.0 1.0 13 43-55 10-22 (46)
360 2eox_A Zinc finger protein 473 20.9 29 0.00098 18.1 0.6 13 44-56 11-23 (44)
361 2epx_A Zinc finger protein 28 20.9 32 0.0011 18.1 0.9 13 43-55 10-22 (47)
362 2eoj_A Zinc finger protein 268 20.8 26 0.00089 18.3 0.4 14 43-56 10-23 (44)
363 2emz_A ZFP-95, zinc finger pro 20.8 30 0.001 18.3 0.7 12 44-55 11-22 (46)
364 2ytg_A ZFP-95, zinc finger pro 20.8 34 0.0012 18.0 1.0 15 43-57 10-24 (46)
365 2emm_A ZFP-95, zinc finger pro 20.8 34 0.0012 18.0 0.9 13 43-55 10-22 (46)
366 2en6_A Zinc finger protein 268 20.7 30 0.001 18.3 0.7 13 43-55 10-22 (46)
367 3irb_A Uncharacterized protein 20.7 32 0.0011 24.6 1.0 9 46-54 48-56 (145)
368 2ytm_A Zinc finger protein 28 20.6 31 0.0011 18.3 0.7 12 44-55 11-22 (46)
369 2en1_A Zinc finger protein 224 20.5 29 0.001 18.3 0.6 15 43-57 10-24 (46)
370 2ep2_A Zinc finger protein 484 20.1 37 0.0013 17.9 1.0 13 43-55 10-22 (46)
371 2js4_A UPF0434 protein BB2007; 20.1 36 0.0012 21.5 1.1 14 29-42 8-21 (70)
372 2rpc_A Zinc finger protein ZIC 20.1 43 0.0015 22.7 1.6 10 31-40 27-36 (155)
373 1v6g_A Actin binding LIM prote 20.1 49 0.0017 20.5 1.7 13 75-87 63-75 (81)
No 1
>3zyq_A Hepatocyte growth factor-regulated tyrosine kinas substrate; signaling; 1.48A {Homo sapiens} PDB: 4avx_A*
Probab=99.95 E-value=5.7e-30 Score=204.87 Aligned_cols=88 Identities=63% Similarity=1.250 Sum_probs=84.0
Q ss_pred CccCCCcCCCCCcccccccCCCCCCcccCCCccccCccccccccccccccccceecCCCCCCccccCCCCCCCceeeChh
Q psy509 1 MKAEGFQFPVLKESDAMFSADTAPEWMDGDTCHRCRTTFSLVQRKHHCRACGQVFCQLCSSKSTSLPKFGIEKEVRVCED 80 (158)
Q Consensus 1 l~~~g~~fp~~~~s~~~~~~~~~p~W~~~~~C~~C~~~F~~~~RkhhCr~CG~vfC~~Cs~~~~~lp~~~~~~~~RVC~~ 80 (158)
||.+||.||+.+++|+||.++.+|.|++++.|+.|+++|++++||||||+||++||+.|+.+++++|.+|..+++|||+.
T Consensus 136 Lk~~G~~FP~~~~~damf~~~~~p~W~~~~~C~~C~~~F~~~~RrhHCR~CG~v~C~~Cs~~~~~~p~~~~~~~~RVC~~ 215 (226)
T 3zyq_A 136 MKVEGHVFPEFKESDAMFAAERAPDWVDAEECHRCRVQFGVMTRKHHCRACGQIFCGKCSSKYSTIPKFGIEKEVRVCEP 215 (226)
T ss_dssp HHHHTCCCCCCCGGGGCCCCCCCCCCCCCSBCTTTCCBCBTTBCCEECTTTCCEECTTTCCEEEEEGGGTEEEEEEECHH
T ss_pred HHhcCCCcccchhHHHhhhcccccccccCCCCcCcCCCCCccccccccCCCcCEeChhhcCCcccCCCCCCCCCCEeCHH
Confidence 67899999999999999999999999999999999999999999999999999999999999999999888899999999
Q ss_pred hHHHHhcc
Q psy509 81 CHEKFTNY 88 (158)
Q Consensus 81 C~~~l~~~ 88 (158)
||..|++.
T Consensus 216 C~~~l~~~ 223 (226)
T 3zyq_A 216 CYEQLNRK 223 (226)
T ss_dssp HHHHHCC-
T ss_pred HHHHhhhh
Confidence 99998863
No 2
>1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate; VHS, FYVE, zinc finger, superhelix, transferase; HET: CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2 g.50.1.1
Probab=99.94 E-value=2.7e-28 Score=194.03 Aligned_cols=87 Identities=60% Similarity=1.255 Sum_probs=80.3
Q ss_pred CccCCCcCCCCCcccccccCCCCCCcccCCCccccCccccccccccccccccceecCCCCCCccccCCCCCCCceeeChh
Q psy509 1 MKAEGFQFPVLKESDAMFSADTAPEWMDGDTCHRCRTTFSLVQRKHHCRACGQVFCQLCSSKSTSLPKFGIEKEVRVCED 80 (158)
Q Consensus 1 l~~~g~~fp~~~~s~~~~~~~~~p~W~~~~~C~~C~~~F~~~~RkhhCr~CG~vfC~~Cs~~~~~lp~~~~~~~~RVC~~ 80 (158)
|+.+|+.||+.+++++||..+.+|.|+++..|+.|+++|++++||||||+||++||+.|+.+++++|.+|..+++|||+.
T Consensus 133 Lk~~G~~FP~~~e~~a~f~~~~~~~W~~~~~C~~C~~~F~~~~rrhhCr~CG~v~C~~Cs~~~~~~~~~~~~~~~RvC~~ 212 (220)
T 1dvp_A 133 LKAKGHTFPELREADAMFTADTAPNWADGRVCHRCRVEFTFTNRKHHCRNCGQVFCGQCTAKQCPLPKYGIEKEVRVCDG 212 (220)
T ss_dssp HHHTTCCCCCCCC---CCCCSCCCCCCCCSBCTTTCCBCCSSSCCEECTTTCCEECSTTSCEEEEEGGGTEEEEEEECHH
T ss_pred HhhcCccccccccccccccccccccCCCCCccCCCCCccCCcccccccCCcCCEEChHHhCCeeecCcCCCCCCCEeCHH
Confidence 57899999999999999999999999999999999999999999999999999999999999999999988899999999
Q ss_pred hHHHHhc
Q psy509 81 CHEKFTN 87 (158)
Q Consensus 81 C~~~l~~ 87 (158)
||..+++
T Consensus 213 C~~~l~~ 219 (220)
T 1dvp_A 213 CFAALQR 219 (220)
T ss_dssp HHHHHHH
T ss_pred HHHHHhc
Confidence 9999875
No 3
>1vfy_A Phosphatidylinositol-3-phosphate binding FYVE domain of protein VPS27; endosome maturation, intracellular trafficking; 1.15A {Saccharomyces cerevisiae} SCOP: g.50.1.1
Probab=99.91 E-value=6.2e-26 Score=152.33 Aligned_cols=69 Identities=49% Similarity=1.048 Sum_probs=61.1
Q ss_pred CCCCCCcccCCCccccCccccccccccccccccceecCCCCCCccccCCCCCCCceeeChhhHHHHhcc
Q psy509 20 ADTAPEWMDGDTCHRCRTTFSLVQRKHHCRACGQVFCQLCSSKSTSLPKFGIEKEVRVCEDCHEKFTNY 88 (158)
Q Consensus 20 ~~~~p~W~~~~~C~~C~~~F~~~~RkhhCr~CG~vfC~~Cs~~~~~lp~~~~~~~~RVC~~C~~~l~~~ 88 (158)
+..+|.|++++.|+.|+++|++|+||||||+||+|||+.|+.++++||.+|+.+++|||+.||..+...
T Consensus 2 ~~~~p~W~~~~~C~~C~~~F~~~~RrHHCR~CG~v~C~~Cs~~~~~lp~~~~~~~~RVC~~C~~~l~~i 70 (73)
T 1vfy_A 2 SKTPADWIDSDACMICSKKFSLLNRKHHCRSCGGVFCQEHSSNSIPLPDLGIYEPVRVCDSCFEDYEFI 70 (73)
T ss_dssp -----CCCCCSBCTTTCCBCBTTBCCEECTTTCCEECGGGSCEEEEEGGGTEEEEEEECHHHHHHHHHH
T ss_pred CCCCCcCccCCcccCCCCccCCccccccCCCCCEEEcccccCCeEEcccCCCCCCCEECHHHHHHHHHH
Confidence 457999999999999999999999999999999999999999999999998889999999999998763
No 4
>1z2q_A LM5-1; membrane protein, FYVE domain, zinc-finger; NMR {Leishmania major}
Probab=99.89 E-value=5.7e-24 Score=146.30 Aligned_cols=73 Identities=32% Similarity=0.759 Sum_probs=67.0
Q ss_pred cccccCCCCCCcccC---CCccccCccccccccccccccccceecCCCCCCccccCCCCCCCceeeChhhHHHHhc
Q psy509 15 DAMFSADTAPEWMDG---DTCHRCRTTFSLVQRKHHCRACGQVFCQLCSSKSTSLPKFGIEKEVRVCEDCHEKFTN 87 (158)
Q Consensus 15 ~~~~~~~~~p~W~~~---~~C~~C~~~F~~~~RkhhCr~CG~vfC~~Cs~~~~~lp~~~~~~~~RVC~~C~~~l~~ 87 (158)
..|-..+..+.|+++ ..|+.|+++|++|+||||||+||+|||+.|+.+++++|.+++.+++|||+.||..++.
T Consensus 4 ~~~~~~~~~~~W~pd~~~~~C~~C~~~Fs~~~RrHHCR~CG~v~C~~Cs~~~~~lp~~~~~~~~RVC~~C~~~l~~ 79 (84)
T 1z2q_A 4 GSMGEKQSKGYWQEDEDAPACNGCGCVFTTTVRRHHCRNCGYVLCGDCSRHRAAIPMRGITEPERVCDACYLALRS 79 (84)
T ss_dssp TTCCTTCCCSCCCCTTTCCBCTTTCCBCCTTSCCEECTTTCCEECTGGGCCEEEETTTTEEEEEECCHHHHHHHHT
T ss_pred ccccccCCCCccccCCCCCCCcCcCCccccchhcccccCCCcEEChHHhCCeEeccCCCCCCCCEECHHHHHHHhh
Confidence 456777789999974 5899999999999999999999999999999999999998878999999999999886
No 5
>1x4u_A Zinc finger, FYVE domain containing 27 isoform B; phosphoinositide binding, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.88 E-value=6.6e-23 Score=140.92 Aligned_cols=67 Identities=25% Similarity=0.693 Sum_probs=61.0
Q ss_pred CCCCCcccC---CCccccCccccccccccccccccceecCCCCCCccccCCCCCC------CceeeChhhHHHHhc
Q psy509 21 DTAPEWMDG---DTCHRCRTTFSLVQRKHHCRACGQVFCQLCSSKSTSLPKFGIE------KEVRVCEDCHEKFTN 87 (158)
Q Consensus 21 ~~~p~W~~~---~~C~~C~~~F~~~~RkhhCr~CG~vfC~~Cs~~~~~lp~~~~~------~~~RVC~~C~~~l~~ 87 (158)
...+.|+++ ..|+.|+++|++|+||||||+||+|||+.|+.+++++|.+|+. +++|||+.||..|..
T Consensus 3 ~~~~~W~pd~~~~~C~~C~~~F~~~~RrHHCR~CG~vfC~~Cs~~~~~l~~~g~~~p~~~~~~~RVC~~C~~~l~~ 78 (84)
T 1x4u_A 3 SGSSGRYPTNNFGNCTGCSATFSVLKKRRSCSNCGNSFCSRCCSFKVPKSSMGATAPEAQRETVFVCASCNQTLSK 78 (84)
T ss_dssp CCCCCSCSCCCCSSCSSSCCCCCSSSCCEECSSSCCEECTTTSCEEECSTTTSCCCSSCSSCCEEECHHHHHHHHS
T ss_pred CCCCccccCCCCCcCcCcCCccccchhhhhhcCCCcEEChhhcCCceecccccccCccccCCccEECHHHHHHHhc
Confidence 457899975 5899999999999999999999999999999999999988764 679999999999987
No 6
>3t7l_A Zinc finger FYVE domain-containing protein 16; structural genomics consortium, SGC, lipid BIND protein, transport protein; 1.09A {Homo sapiens}
Probab=99.86 E-value=8.4e-23 Score=142.19 Aligned_cols=72 Identities=36% Similarity=0.935 Sum_probs=64.1
Q ss_pred cccccCCCCCCccc---CCCccccCccccccccccccccccceecCCCCCCccccCCCCCCCceeeChhhHHHHhcc
Q psy509 15 DAMFSADTAPEWMD---GDTCHRCRTTFSLVQRKHHCRACGQVFCQLCSSKSTSLPKFGIEKEVRVCEDCHEKFTNY 88 (158)
Q Consensus 15 ~~~~~~~~~p~W~~---~~~C~~C~~~F~~~~RkhhCr~CG~vfC~~Cs~~~~~lp~~~~~~~~RVC~~C~~~l~~~ 88 (158)
++|+....+|.|++ ...|+.|+++|++++||||||+||+|||..|+.+++++|.. .+++|||+.||..|+..
T Consensus 3 ~~~~l~~~~p~W~~d~~~~~C~~C~~~F~~~~RrhhCr~CG~v~C~~Cs~~~~~l~~~--~~~~RVC~~C~~~l~~~ 77 (90)
T 3t7l_A 3 EGLVLGQKQPTWVPDSEAPNCMNCQVKFTFTKRRHHCRACGKVFCGVCCNRKCKLQYL--EKEARVCVVCYETISKA 77 (90)
T ss_dssp --CCTTTSCCCCCCGGGCCBCTTTCCBCCSSSCCEECTTTCCEECGGGSCEEEEETTT--TEEEEECHHHHHHHHHH
T ss_pred hhcccCCCCCcCcccccCCcCcCCCCcccchhhCccccCCCCEECCcccCCeeecCCC--CCCCeECHHHHHHHHHH
Confidence 46788888999997 46899999999999999999999999999999999998864 48999999999999874
No 7
>2yw8_A RUN and FYVE domain-containing protein 1; structure genomics, structural genomics, NPPSFA; 3.00A {Homo sapiens} PDB: 2yqm_A
Probab=99.86 E-value=1.4e-22 Score=138.75 Aligned_cols=67 Identities=40% Similarity=1.010 Sum_probs=53.9
Q ss_pred CCCCCcccC---CCccccCccccccccccccccccceecCCCCCCccccCCCCCCCceeeChhhHHHHhccc
Q psy509 21 DTAPEWMDG---DTCHRCRTTFSLVQRKHHCRACGQVFCQLCSSKSTSLPKFGIEKEVRVCEDCHEKFTNYY 89 (158)
Q Consensus 21 ~~~p~W~~~---~~C~~C~~~F~~~~RkhhCr~CG~vfC~~Cs~~~~~lp~~~~~~~~RVC~~C~~~l~~~~ 89 (158)
...|.|+++ ..|+.|+++|++|+||||||+||+|||+.|+.++++||.+ .+++|||+.||..|....
T Consensus 8 ~~~~~W~~d~~~~~C~~C~~~Fs~~~RrHHCR~CG~v~C~~Cs~~~~~l~~~--~~~~RVC~~C~~~l~~~~ 77 (82)
T 2yw8_A 8 LKGHAWLKDDEATHCRQCEKEFSISRRKHHCRNCGHIFCNTCSSNELALPSY--PKPVRVCDSCHTLLLQRC 77 (82)
T ss_dssp -------CCCCCCBCTTTCCBCBTTBCCEECTTTCCEECSGGGCEEECCTTC--SSCEEECHHHHHHTTC--
T ss_pred cCCCccccCccCCcccCcCCcccCccccccCCCCCCEEChHHhCCeeecCCC--CCcCEECHHHHHHHHHhc
Confidence 346899975 4799999999999999999999999999999999999875 689999999999988643
No 8
>1joc_A EEA1, early endosomal autoantigen 1; FYVE domain, inositol 3-phosphate binding, membrane protein; HET: ITP; 2.20A {Homo sapiens} SCOP: g.50.1.1 h.1.21.1 PDB: 1hyi_A* 1hyj_A
Probab=99.82 E-value=3.2e-21 Score=141.61 Aligned_cols=63 Identities=38% Similarity=0.967 Sum_probs=57.3
Q ss_pred CCCCcccC---CCccccCccccccccccccccccceecCCCCCCccccCCCCCCCceeeChhhHHHHh
Q psy509 22 TAPEWMDG---DTCHRCRTTFSLVQRKHHCRACGQVFCQLCSSKSTSLPKFGIEKEVRVCEDCHEKFT 86 (158)
Q Consensus 22 ~~p~W~~~---~~C~~C~~~F~~~~RkhhCr~CG~vfC~~Cs~~~~~lp~~~~~~~~RVC~~C~~~l~ 86 (158)
.+|.|+++ ..|+.|+++|++|+||||||+||.|||+.|+.+.+++|.. .+|+|||+.||..|+
T Consensus 59 ~~~~W~~d~~~~~C~~C~~~Fs~~~RrHHCR~CG~vfC~~Cs~~~~~~p~~--~~p~RVC~~C~~~l~ 124 (125)
T 1joc_A 59 LNRKWAEDNEVQNCMACGKGFSVTVRRHHCRQCGNIFCAECSAKNALTPSS--KKPVRVCDACFNDLQ 124 (125)
T ss_dssp HHCCCCCGGGCCBCTTTCCBCCSSSCCEECTTTCCEECGGGSCEEECCTTC--SSCEEECHHHHHHTT
T ss_pred CCCccccCCCCCCCcCcCCccccccccccCCCCCeEEChHHhCCccccCCC--CCCCEeCHHHHHHhc
Confidence 36899974 5899999999999999999999999999999999988863 689999999999876
No 9
>1wfk_A Zinc finger, FYVE domain containing 19; riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Mus musculus} SCOP: g.50.1.1
Probab=99.82 E-value=6.4e-21 Score=132.22 Aligned_cols=60 Identities=32% Similarity=0.783 Sum_probs=55.9
Q ss_pred cCCCccccCccccccccccccccccceecCCCCCCccccCCCCCCCceeeChhhHHHHhcc
Q psy509 28 DGDTCHRCRTTFSLVQRKHHCRACGQVFCQLCSSKSTSLPKFGIEKEVRVCEDCHEKFTNY 88 (158)
Q Consensus 28 ~~~~C~~C~~~F~~~~RkhhCr~CG~vfC~~Cs~~~~~lp~~~~~~~~RVC~~C~~~l~~~ 88 (158)
+...|+.|+++|++|+||||||+||+|||+.|+.++++||.+| .+++|||+.||..|...
T Consensus 8 ~~~~C~~C~~~F~~~~RrHHCR~CG~vfC~~Cs~~~~~lp~~g-~~~~RVC~~C~~~l~~~ 67 (88)
T 1wfk_A 8 MESRCYGCAVKFTLFKKEYGCKNCGRAFCNGCLSFSALVPRAG-NTQQKVCKQCHTILTRG 67 (88)
T ss_dssp CCSBCTTTCCBCCSSSCEEECSSSCCEEETTTSCEEEEETTTT-SEEEEECHHHHHHHHHC
T ss_pred cCCCCcCcCCcccCccccccCCCCCCEEChhHcCCceeccccC-CCcCEECHHHHHHHHhc
Confidence 3568999999999999999999999999999999999999887 58999999999999873
No 10
>1y02_A CARP2, FYVE-ring finger protein sakura; zinc-binding module, phosphoinositide binding, caspase regulation, metal binding protein; 1.80A {Homo sapiens} SCOP: a.140.2.1 g.50.1.1
Probab=99.71 E-value=2.2e-18 Score=125.63 Aligned_cols=54 Identities=28% Similarity=0.573 Sum_probs=44.2
Q ss_pred cccCCCccccCccccccccccccccccceecCCCCCCccccCCCCCCCceeeChhhHHHHhc
Q psy509 26 WMDGDTCHRCRTTFSLVQRKHHCRACGQVFCQLCSSKSTSLPKFGIEKEVRVCEDCHEKFTN 87 (158)
Q Consensus 26 W~~~~~C~~C~~~F~~~~RkhhCr~CG~vfC~~Cs~~~~~lp~~~~~~~~RVC~~C~~~l~~ 87 (158)
|.....|+.|+..|++++||||||+||+|||+.|+.++++ ++|||+.||..+..
T Consensus 16 d~~~~~C~~C~~~Fs~~~RkHHCR~CG~ifC~~Cs~~~~~--------~vRVC~~C~~~~~~ 69 (120)
T 1y02_A 16 TGLEPSCKSCGAHFANTARKQTCLDCKKNFCMTCSSQVGN--------GPRLCLLCQRFRAT 69 (120)
T ss_dssp ----CCCTTTCCCCSSGGGCEECTTTCCEECGGGEEC------------CCEEHHHHHHHHT
T ss_pred ccccCcccCcCCccccccccccCCCCCCeeCHHHhCCCCC--------CceECHHHHHHHhc
Confidence 3446799999999999999999999999999999999854 48999999998876
No 11
>3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens}
Probab=99.70 E-value=1.2e-18 Score=148.83 Aligned_cols=75 Identities=28% Similarity=0.693 Sum_probs=0.0
Q ss_pred CcccccccCCCCCCccc---CCCccccCccccccccccccccccceecCCCCCCccccCCCCCCCceeeChhhHHHHhc
Q psy509 12 KESDAMFSADTAPEWMD---GDTCHRCRTTFSLVQRKHHCRACGQVFCQLCSSKSTSLPKFGIEKEVRVCEDCHEKFTN 87 (158)
Q Consensus 12 ~~s~~~~~~~~~p~W~~---~~~C~~C~~~F~~~~RkhhCr~CG~vfC~~Cs~~~~~lp~~~~~~~~RVC~~C~~~l~~ 87 (158)
.+...+.....+|.|++ ...|+.|+..|++++||||||+||++||..|+.+++++|..+ .+++|||+.||..+++
T Consensus 355 ~~~~~~~~~~~~p~w~~~~~~~~c~~c~~~f~~~~r~h~Cr~Cg~~~C~~Cs~~~~~~~~~~-~~~~rvC~~C~~~l~~ 432 (434)
T 3mpx_A 355 RERLGVSLGERPPTLVPVTHVMMCMNCGCDFSLTLRRHHCHACGKIVCRNCSRNKYPLKYLK-DRMAKVCDGCFGELKK 432 (434)
T ss_dssp -------------------------------------------------------------------------------
T ss_pred hhcccCccccCCCcCCCcccCCcCCCcCCCCCCcchhhhcccCcCEeehhhCCCeeeCCCCC-CCcCEecHHHHHHHHh
Confidence 34445666678999997 468999999999999999999999999999999999987443 6899999999998865
No 12
>2d3g_P Ubiquitin interacting motif from hepatocyte growth factor-regulated tyrosine kinase...; protein-protein complex, UIM and ubiquitin; 1.70A {Bos taurus}
Probab=98.74 E-value=4.5e-09 Score=55.50 Aligned_cols=24 Identities=75% Similarity=0.851 Sum_probs=21.7
Q ss_pred hcchHHHHHHHHhcHHHHhhcCCC
Q psy509 134 LKEEEELQLALALSQSEAESNKPC 157 (158)
Q Consensus 134 ~~eeedl~~aia~Sl~e~e~~~~~ 157 (158)
++|+|||++|||+|+||+|+++++
T Consensus 1 L~EeEEl~LAlAlS~sEae~~~~~ 24 (26)
T 2d3g_P 1 LQEEEELQLALALSQSEAEEKXXX 24 (26)
T ss_pred CchHHHHHHHHHHHHHHHHHhccc
Confidence 468999999999999999999875
No 13
>1q0v_A Hydrophilic protein; has cysteine rich putative zinc finger esential for function;...; stable, non-interacting alpha-helices; NMR {Saccharomyces cerevisiae} SCOP: j.105.1.1 PDB: 1q0w_A
Probab=98.38 E-value=8.8e-08 Score=64.64 Aligned_cols=27 Identities=37% Similarity=0.329 Sum_probs=23.4
Q ss_pred hhhhcchHHHHHHHHhcHHHHhhcCCC
Q psy509 131 EEELKEEEELQLALALSQSEAESNKPC 157 (158)
Q Consensus 131 ~~~~~eeedl~~aia~Sl~e~e~~~~~ 157 (158)
..+++||+||++|||+||.|+|++|++
T Consensus 49 ~~~edeD~DLKAAIaASLrd~E~qK~~ 75 (81)
T 1q0v_A 49 EIEEEEDPDLKAAIQESLREAEEAKLR 75 (81)
T ss_dssp CCCCCSCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcccCHHHHHHHHHHHHHHHHHHHH
Confidence 345788999999999999999998863
No 14
>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A
Probab=97.71 E-value=7.9e-06 Score=68.90 Aligned_cols=40 Identities=13% Similarity=0.378 Sum_probs=34.1
Q ss_pred CCCccc---CCCccccCccc-cccccccccccccceecCCCCCC
Q psy509 23 APEWMD---GDTCHRCRTTF-SLVQRKHHCRACGQVFCQLCSSK 62 (158)
Q Consensus 23 ~p~W~~---~~~C~~C~~~F-~~~~RkhhCr~CG~vfC~~Cs~~ 62 (158)
.+.|.. ...|..|+..| ++++|.|||+.||.+||..|+.+
T Consensus 348 ~f~~~~~~~~t~C~~C~~~~~g~~~qg~~C~~C~~~~h~~C~~~ 391 (406)
T 2vrw_B 348 DFQMFSFEETTSCKACQMLLRGTFYQGYRCYRCRAPAHKECLGR 391 (406)
T ss_dssp CEEEECCSSCCBCTTTCCBCCSSSSCEEEETTTCCEECGGGGGG
T ss_pred CCccccCCCCCCCccccchhceeCCCCCCCCCCcCccchhhhhh
Confidence 344553 46899999999 59999999999999999999975
No 15
>1zbd_B Rabphilin-3A; G protein, effector, RABCDR, synaptic exocytosis, RAB protein, RAB3A; HET: GTP; 2.60A {Rattus norvegicus} SCOP: g.50.1.1
Probab=97.28 E-value=0.00017 Score=52.91 Aligned_cols=55 Identities=18% Similarity=0.475 Sum_probs=44.7
Q ss_pred cCCCccccCccccc-cccccccccccceecCCCCCCccccCCCCCCCceeeChhhHHHHh
Q psy509 28 DGDTCHRCRTTFSL-VQRKHHCRACGQVFCQLCSSKSTSLPKFGIEKEVRVCEDCHEKFT 86 (158)
Q Consensus 28 ~~~~C~~C~~~F~~-~~RkhhCr~CG~vfC~~Cs~~~~~lp~~~~~~~~RVC~~C~~~l~ 86 (158)
....|..|.+.|++ +++.+.|..|..-||..|..... .+-....-+|..|+..-.
T Consensus 54 ~~~~C~~C~~~~g~l~~~g~~C~~C~~~VC~~C~~~~~----~~~~~~~W~C~vC~k~re 109 (134)
T 1zbd_B 54 GVNRCILCGEQLGMLGSASVVCEDCKKNVCTKCGVETS----NNRPHPVWLCKICLEQRE 109 (134)
T ss_dssp SSSBCSSSCCBCSTTSCCEEECTTTCCEEETTSEEECC----CSSSSCCEEEHHHHHHHH
T ss_pred CCccccccCCCcccccCCCCCCCCCCcccccccCCccC----CCCCccceechhhHHHHH
Confidence 45789999999985 58999999999999999987642 122467899999998754
No 16
>2zet_C Melanophilin; complex, GTP-binding protein, GTPase, G-protein, RAB, RAB27B, effector, SLP homology domain, acetylation, lipoprotein, membrane; HET: GTP; 3.00A {Mus musculus}
Probab=97.06 E-value=0.00029 Score=52.83 Aligned_cols=52 Identities=27% Similarity=0.774 Sum_probs=43.3
Q ss_pred cCCCccccCcccccc-ccccccccccceecCCCCCCccccCCCCCCCceeeChhhHHHHh
Q psy509 28 DGDTCHRCRTTFSLV-QRKHHCRACGQVFCQLCSSKSTSLPKFGIEKEVRVCEDCHEKFT 86 (158)
Q Consensus 28 ~~~~C~~C~~~F~~~-~RkhhCr~CG~vfC~~Cs~~~~~lp~~~~~~~~RVC~~C~~~l~ 86 (158)
+...|..|.++|+++ ++.+-|..|..-||..|..+. + ....-+|..|+..-.
T Consensus 67 ~~~~C~~C~~~fg~l~~~g~~C~~C~~~VC~~C~~~~---~----~~~~W~C~vC~k~re 119 (153)
T 2zet_C 67 NETHCARCLQPYRLLLNSRRQCLECSLFVCKSCSHAH---P----EEQGWLCDPCHLARV 119 (153)
T ss_dssp GGTBCTTTCCBGGGCSSCCEECTTTCCEECGGGEECC---S----SSSSCEEHHHHHHHH
T ss_pred CCccchhhcCccccccCCCCcCCCCCchhhccccccc---C----CCCcEeeHHHHHHHH
Confidence 467999999999965 899999999999999999532 2 356799999998743
No 17
>1q0v_A Hydrophilic protein; has cysteine rich putative zinc finger esential for function;...; stable, non-interacting alpha-helices; NMR {Saccharomyces cerevisiae} SCOP: j.105.1.1 PDB: 1q0w_A
Probab=96.55 E-value=0.00071 Score=45.48 Aligned_cols=22 Identities=32% Similarity=0.368 Sum_probs=18.5
Q ss_pred hhcchHHHHHHHHhcHHHHhhc
Q psy509 133 ELKEEEELQLALALSQSEAESN 154 (158)
Q Consensus 133 ~~~eeedl~~aia~Sl~e~e~~ 154 (158)
+.++||||++||+|||.|....
T Consensus 8 ~~~eDeDLkrAieLSL~Es~~~ 29 (81)
T 1q0v_A 8 PEDEEELIRKAIELSLKESRNS 29 (81)
T ss_dssp CSSHHHHHHHHHHHHHHCCCCC
T ss_pred ccCchHHHHHHHHHhHHHHcCC
Confidence 4678999999999999997543
No 18
>1twf_L ABC10-alpha, DNA-directed RNA polymerases I, II, and III 7.7 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.9.2 PDB: 1i3q_L 1i6h_L 1k83_L* 1nik_L 1nt9_L 1pqv_L 1r5u_L 1r9s_L* 1r9t_L* 1sfo_L* 1twa_L* 1twc_L* 1i50_L* 1twg_L* 1twh_L* 1wcm_L 1y1v_L 1y1w_L 1y1y_L 1y77_L* ...
Probab=95.78 E-value=0.0028 Score=41.49 Aligned_cols=50 Identities=28% Similarity=0.630 Sum_probs=19.8
Q ss_pred CccCCCcCCCCCcc---cccccCCCCCCccc-CCCccccCccccccc-cccccccccc-ee
Q psy509 1 MKAEGFQFPVLKES---DAMFSADTAPEWMD-GDTCHRCRTTFSLVQ-RKHHCRACGQ-VF 55 (158)
Q Consensus 1 l~~~g~~fp~~~~s---~~~~~~~~~p~W~~-~~~C~~C~~~F~~~~-RkhhCr~CG~-vf 55 (158)
|-+|||++|.-..+ ..+... . .. .-.|..|+..|.+.. -..+|+.||. |+
T Consensus 1 msre~~q~p~~~~~~~~~g~~~~-~----~~v~Y~C~~CG~~~e~~~~d~irCp~CG~RIL 56 (70)
T 1twf_L 1 MSREGFQIPTNLDAAAAGTSQAR-T----ATLKYICAECSSKLSLSRTDAVRCKDCGHRIL 56 (70)
T ss_dssp -----------------------------CCCCEECSSSCCEECCCTTSTTCCSSSCCCCC
T ss_pred CCcccccCCCCcCccccccccCC-C----ceEEEECCCCCCcceeCCCCCccCCCCCceEe
Confidence 67899999993211 122111 1 11 237999999998753 3467888887 44
No 19
>2csz_A Synaptotagmin-like protein 4; exophilin 2, granuphilin, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.73 E-value=0.0043 Score=41.20 Aligned_cols=48 Identities=23% Similarity=0.715 Sum_probs=40.0
Q ss_pred CCCccccCccccc-cccccccccccceecCCCCCCccccCCCCCCCceeeChhhHHH
Q psy509 29 GDTCHRCRTTFSL-VQRKHHCRACGQVFCQLCSSKSTSLPKFGIEKEVRVCEDCHEK 84 (158)
Q Consensus 29 ~~~C~~C~~~F~~-~~RkhhCr~CG~vfC~~Cs~~~~~lp~~~~~~~~RVC~~C~~~ 84 (158)
...|..|+.+|++ ++|--.|+.|-+-||.+|-... ..+.-.|..|+..
T Consensus 25 ~r~CarC~~~LG~l~~~g~~C~~Ck~rVC~~Crv~~--------~~~~W~C~VC~k~ 73 (76)
T 2csz_A 25 DRTCARCQESLGRLSPKTNTCRGCNHLVCRDCRIQE--------SNGTWRCKVCSGP 73 (76)
T ss_dssp CCBCSSSCCBCSSSCTTTSEETTTTEECCTTSEEEC--------STTCEEEHHHHSS
T ss_pred ccchhhhCccccccccCCCcCcccChhhcccccccC--------CCCCEEEeeCchh
Confidence 4689999999995 5799999999999999997553 1257899999864
No 20
>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A
Probab=95.40 E-value=0.006 Score=53.80 Aligned_cols=34 Identities=15% Similarity=0.488 Sum_probs=31.1
Q ss_pred CCCccccCccc-cccccccccccccceecCCCCCC
Q psy509 29 GDTCHRCRTTF-SLVQRKHHCRACGQVFCQLCSSK 62 (158)
Q Consensus 29 ~~~C~~C~~~F-~~~~RkhhCr~CG~vfC~~Cs~~ 62 (158)
...|..|+..| +++++.|||+.||.++|..|...
T Consensus 529 ~t~C~~C~~~l~gl~~qg~~C~~C~~~vHk~C~~~ 563 (587)
T 3ky9_A 529 TTSCKACQMLLRGTFYQGYRCHRCRASAHKECLGR 563 (587)
T ss_dssp CCBCTTTCSBCCSSSCCEEEETTTCCEECSGGGGG
T ss_pred CcccccccccccccccCCcCCCCCCCccchhhhhc
Confidence 46899999987 89999999999999999999876
No 21
>1wfh_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=95.39 E-value=0.015 Score=37.27 Aligned_cols=30 Identities=33% Similarity=0.831 Sum_probs=24.7
Q ss_pred ccCCCccccCccccccccccccccccceecCCC
Q psy509 27 MDGDTCHRCRTTFSLVQRKHHCRACGQVFCQLC 59 (158)
Q Consensus 27 ~~~~~C~~C~~~F~~~~RkhhCr~CG~vfC~~C 59 (158)
.....|..|+++.+++ ...|| ||.+||...
T Consensus 13 ~~~~rC~~C~kkvgl~--~f~Cr-Cg~~FC~~H 42 (64)
T 1wfh_A 13 QRPNRCTVCRKRVGLT--GFMCR-CGTTFCGSH 42 (64)
T ss_dssp SSCCCCTTTCCCCCTT--CEECS-SSCEECTTT
T ss_pred CcCCcChhhCCccCcc--CEEee-cCCEecccc
Confidence 3456899999998877 68995 999998864
No 22
>1wff_A Riken cDNA 2810002D23 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=95.35 E-value=0.025 Score=38.26 Aligned_cols=29 Identities=31% Similarity=0.768 Sum_probs=24.1
Q ss_pred CCCccccCccccccccccccccccceecCCC
Q psy509 29 GDTCHRCRTTFSLVQRKHHCRACGQVFCQLC 59 (158)
Q Consensus 29 ~~~C~~C~~~F~~~~RkhhCr~CG~vfC~~C 59 (158)
...|..|+++.+++ -..+|| ||.+||...
T Consensus 25 ~~rC~~C~kkvgl~-~~f~Cr-Cg~~FC~~H 53 (85)
T 1wff_A 25 MKHCFLCGKKTGLA-TSFECR-CGNNFCASH 53 (85)
T ss_dssp CCBCSSSCCBCSSS-SCEECT-TCCEECTTT
T ss_pred CccchhhCCeeccc-CCeEcC-CCCEecccC
Confidence 46899999998886 358998 999998864
No 23
>1wfl_A Zinc finger protein 216; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=93.77 E-value=0.12 Score=33.97 Aligned_cols=28 Identities=39% Similarity=1.043 Sum_probs=23.7
Q ss_pred CCCccccCccccccccccccccccceecCCC
Q psy509 29 GDTCHRCRTTFSLVQRKHHCRACGQVFCQLC 59 (158)
Q Consensus 29 ~~~C~~C~~~F~~~~RkhhCr~CG~vfC~~C 59 (158)
...|..|+++.+++ ...|| ||.+||...
T Consensus 25 ~nRC~~CrKkvgL~--gf~Cr-Cg~~FCs~H 52 (74)
T 1wfl_A 25 KNRCFMCRKKVGLT--GFDCR-CGNLFCGLH 52 (74)
T ss_dssp TTBCSSSCCBCGGG--CEECT-TSCEECSSS
T ss_pred CCcChhhCCccccc--CeecC-CCCEechhc
Confidence 45799999998887 48999 999998764
No 24
>1wfp_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=93.73 E-value=0.067 Score=35.21 Aligned_cols=28 Identities=25% Similarity=0.803 Sum_probs=23.9
Q ss_pred CCCccccCccccccccccccccccceecCCC
Q psy509 29 GDTCHRCRTTFSLVQRKHHCRACGQVFCQLC 59 (158)
Q Consensus 29 ~~~C~~C~~~F~~~~RkhhCr~CG~vfC~~C 59 (158)
...|..|+++.+++ ...| .||.+||...
T Consensus 25 ~~RC~~C~kkvgL~--~f~C-rCg~~FCs~H 52 (74)
T 1wfp_A 25 ATRCLSCNKKVGVT--GFKC-RCGSTFCGTH 52 (74)
T ss_dssp CCBCSSSCCBCTTT--CEEC-TTSCEECTTT
T ss_pred CccchhhcCccccc--ceEe-ccCCEecccc
Confidence 46899999998887 7899 5999998864
No 25
>1wg2_A Zinc finger (AN1-like) family protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=93.42 E-value=0.081 Score=33.87 Aligned_cols=28 Identities=25% Similarity=0.861 Sum_probs=23.6
Q ss_pred CCCccccCccccccccccccccccceecCCC
Q psy509 29 GDTCHRCRTTFSLVQRKHHCRACGQVFCQLC 59 (158)
Q Consensus 29 ~~~C~~C~~~F~~~~RkhhCr~CG~vfC~~C 59 (158)
...|..|+++.+++ ...| .||.+||...
T Consensus 15 ~~rC~~C~kkvgl~--~f~C-rCg~~FC~~H 42 (64)
T 1wg2_A 15 NNRCFSCNKKVGVM--GFKC-KCGSTFCGSH 42 (64)
T ss_dssp SCSCTTTCCCCTTS--CEEC-TTSCEECSSS
T ss_pred CCcChhhCCccccc--CeEe-ecCCEecccC
Confidence 46899999998877 6899 6999998864
No 26
>2klz_A Ataxin-3; UIM, ubiquitin-binding, hydrolase, neurodegenerati nucleus, phosphoprotein, spinocerebellar ataxia, transcript transcription regulation; NMR {Homo sapiens}
Probab=93.12 E-value=0.042 Score=33.29 Aligned_cols=18 Identities=56% Similarity=0.750 Sum_probs=13.4
Q ss_pred cchHHHHHHHHhcHHHHh
Q psy509 135 KEEEELQLALALSQSEAE 152 (158)
Q Consensus 135 ~eeedl~~aia~Sl~e~e 152 (158)
++|||||.|||+|-.|.+
T Consensus 5 EDEedlqrALalSRQE~d 22 (52)
T 2klz_A 5 EDEEDLQRALALSRQEID 22 (52)
T ss_dssp HHHHHHHHHHHHHHHHHC
T ss_pred cchHHHHHHHHHHHHHhc
Confidence 456788888888877654
No 27
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=92.89 E-value=0.035 Score=33.07 Aligned_cols=36 Identities=19% Similarity=0.371 Sum_probs=26.5
Q ss_pred CCCccccCccccccccccccccccceecCCCCCCcc
Q psy509 29 GDTCHRCRTTFSLVQRKHHCRACGQVFCQLCSSKST 64 (158)
Q Consensus 29 ~~~C~~C~~~F~~~~RkhhCr~CG~vfC~~Cs~~~~ 64 (158)
...|.+|...|..-..-..-..||++||..|...+.
T Consensus 5 ~~~C~IC~~~~~~~~~~~~~~~C~H~f~~~Ci~~w~ 40 (55)
T 1iym_A 5 GVECAVCLAELEDGEEARFLPRCGHGFHAECVDMWL 40 (55)
T ss_dssp SCCCTTTCCCCCTTSCCEECSSSCCEECTTHHHHTT
T ss_pred CCcCccCCccccCCCceEECCCCCCcccHHHHHHHH
Confidence 468999998886533333334699999999987764
No 28
>1x4w_A Hypothetical protein FLJ13222; ZF-AN1 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=92.78 E-value=0.057 Score=34.90 Aligned_cols=30 Identities=43% Similarity=0.977 Sum_probs=24.2
Q ss_pred CCCccccCcccccccc-ccccccccceecCCC
Q psy509 29 GDTCHRCRTTFSLVQR-KHHCRACGQVFCQLC 59 (158)
Q Consensus 29 ~~~C~~C~~~F~~~~R-khhCr~CG~vfC~~C 59 (158)
...|..|+++-++... -..| .||.+||...
T Consensus 15 ~~rC~~C~kk~gL~~~egf~C-rCg~~FC~~H 45 (67)
T 1x4w_A 15 RRRCFQCQTKLELVQQELGSC-RCGYVFCMLH 45 (67)
T ss_dssp TTBCSSSCCBCCHHHHHHHCC-SSSCCCCTTT
T ss_pred CCcchhhCCeecccccCceEe-cCCCEehhcc
Confidence 4589999999887654 3789 7999998864
No 29
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=91.86 E-value=0.037 Score=38.27 Aligned_cols=53 Identities=17% Similarity=0.406 Sum_probs=35.8
Q ss_pred CCCcccCCCccccCccccccccccccccccceecCCCCCCccccCCCCCCCceeeChhhHHHHh
Q psy509 23 APEWMDGDTCHRCRTTFSLVQRKHHCRACGQVFCQLCSSKSTSLPKFGIEKEVRVCEDCHEKFT 86 (158)
Q Consensus 23 ~p~W~~~~~C~~C~~~F~~~~RkhhCr~CG~vfC~~Cs~~~~~lp~~~~~~~~RVC~~C~~~l~ 86 (158)
...+.+...|.+|...|.--. --.||++||..|...+.. .....|..|...+.
T Consensus 9 ~~~~~~~~~C~iC~~~~~~p~----~~~CgH~fC~~Ci~~~~~-------~~~~~CP~Cr~~~~ 61 (115)
T 3l11_A 9 AIPSLSECQCGICMEILVEPV----TLPCNHTLCKPCFQSTVE-------KASLCCPFCRRRVS 61 (115)
T ss_dssp CCCCHHHHBCTTTCSBCSSCE----ECTTSCEECHHHHCCCCC-------TTTSBCTTTCCBCH
T ss_pred ccCCCCCCCCccCCcccCcee----EcCCCCHHhHHHHHHHHh-------HCcCCCCCCCcccC
Confidence 344455668999998775211 127999999999887642 12367888876654
No 30
>2a20_A Regulating synaptic membrane exocytosis protein 2; zinc-finger domain, metal binding protein; NMR {Rattus norvegicus} PDB: 2cjs_C
Probab=91.06 E-value=0.21 Score=31.45 Aligned_cols=52 Identities=33% Similarity=0.718 Sum_probs=39.0
Q ss_pred cCCCccccCc-cccccccccccccccceecCCCCCCccccCCCCCCCceeeChhhHHH
Q psy509 28 DGDTCHRCRT-TFSLVQRKHHCRACGQVFCQLCSSKSTSLPKFGIEKEVRVCEDCHEK 84 (158)
Q Consensus 28 ~~~~C~~C~~-~F~~~~RkhhCr~CG~vfC~~Cs~~~~~lp~~~~~~~~RVC~~C~~~ 84 (158)
+...|.+|.+ +|.-- --|.|.+|..-||..|.-+. +|. .++-.-||..|...
T Consensus 8 d~~~C~iC~KTKFADG-~Gh~C~yCk~r~CaRCGg~v-~lr---~~k~~WvC~lC~k~ 60 (62)
T 2a20_A 8 DAPTCGICHKTKFADG-CGHNCSYCQTKFCARCGGRV-SLR---SNKVMWVCNLCRKQ 60 (62)
T ss_dssp CCCCCSSSSCSCCCSS-CCEEBTTTCCEECTTSEEEE-ESS---TTCEEEEEHHHHHH
T ss_pred CcchhhhhccceeccC-CCccccccCCeeecccCCEe-eec---CCeEEEEehhhhhc
Confidence 4578999985 56433 24899999999999998774 332 25778999999764
No 31
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=91.04 E-value=0.11 Score=31.73 Aligned_cols=35 Identities=20% Similarity=0.476 Sum_probs=25.2
Q ss_pred ccCCCccccCccccccccccccccccceecCCCCCCccc
Q psy509 27 MDGDTCHRCRTTFSLVQRKHHCRACGQVFCQLCSSKSTS 65 (158)
Q Consensus 27 ~~~~~C~~C~~~F~~~~RkhhCr~CG~vfC~~Cs~~~~~ 65 (158)
.+...|.+|...|.--.. -.||++||..|...+..
T Consensus 18 ~~~~~C~IC~~~~~~p~~----~~CgH~fC~~Ci~~~~~ 52 (63)
T 2ysj_A 18 QEEVICPICLDILQKPVT----IDCGHNFCLKCITQIGE 52 (63)
T ss_dssp CCCCBCTTTCSBCSSCEE----CTTSSEECHHHHHHHHH
T ss_pred ccCCCCCcCCchhCCeEE----eCCCCcchHHHHHHHHH
Confidence 345689999887753211 27999999999877643
No 32
>1z60_A TFIIH basal transcription factor complex P44 subunit; basic transcription factor, zinc binding protein, ring finger; NMR {Homo sapiens} SCOP: g.49.1.2
Probab=90.83 E-value=0.039 Score=34.79 Aligned_cols=31 Identities=26% Similarity=0.604 Sum_probs=25.0
Q ss_pred CccccCccccccccccccccccceecCCCCCC
Q psy509 31 TCHRCRTTFSLVQRKHHCRACGQVFCQLCSSK 62 (158)
Q Consensus 31 ~C~~C~~~F~~~~RkhhCr~CG~vfC~~Cs~~ 62 (158)
.|.+|.+.|.-.. ++.|..|+.+||..|=.+
T Consensus 17 ~C~~C~~~~~~~~-~y~C~~C~~~FC~dCD~f 47 (59)
T 1z60_A 17 FCYGCQGELKDQH-VYVCAVCQNVFCVDCDVF 47 (59)
T ss_dssp EETTTTEECTTSE-EECCTTTTCCBCHHHHHT
T ss_pred cccccCcccCCCc-cEECCccCcCcccchhHH
Confidence 5999999995322 378999999999999644
No 33
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=90.70 E-value=0.016 Score=36.81 Aligned_cols=50 Identities=20% Similarity=0.402 Sum_probs=34.0
Q ss_pred CCCccccCccccccccccccccccceecCCCCCCccccCCCCCCCceeeChhhHHHHhc
Q psy509 29 GDTCHRCRTTFSLVQRKHHCRACGQVFCQLCSSKSTSLPKFGIEKEVRVCEDCHEKFTN 87 (158)
Q Consensus 29 ~~~C~~C~~~F~~~~RkhhCr~CG~vfC~~Cs~~~~~lp~~~~~~~~RVC~~C~~~l~~ 87 (158)
...|.+|...|..-..-.. -.||++||..|...++.. ...|..|...+..
T Consensus 15 ~~~C~IC~~~~~~~~~~~~-~~C~H~f~~~Ci~~~~~~--------~~~CP~Cr~~~~~ 64 (74)
T 2ep4_A 15 HELCAVCLEDFKPRDELGI-CPCKHAFHRKCLIKWLEV--------RKVCPLCNMPVLQ 64 (74)
T ss_dssp SCBCSSSCCBCCSSSCEEE-ETTTEEEEHHHHHHHHHH--------CSBCTTTCCBCSS
T ss_pred CCCCcCCCcccCCCCcEEE-cCCCCEecHHHHHHHHHc--------CCcCCCcCccccc
Confidence 5689999998753322211 159999999998876432 2478888766554
No 34
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=90.34 E-value=0.1 Score=33.33 Aligned_cols=51 Identities=20% Similarity=0.477 Sum_probs=34.4
Q ss_pred cCCCccccCccccccccccccccccceecCCCCCCccccCCCCCCCceeeChhhHHHHhc
Q psy509 28 DGDTCHRCRTTFSLVQRKHHCRACGQVFCQLCSSKSTSLPKFGIEKEVRVCEDCHEKFTN 87 (158)
Q Consensus 28 ~~~~C~~C~~~F~~~~RkhhCr~CG~vfC~~Cs~~~~~lp~~~~~~~~RVC~~C~~~l~~ 87 (158)
+...|.+|...|..-.. ..--.||++||..|...++.. ...|-.|...+..
T Consensus 14 ~~~~C~IC~~~~~~~~~-~~~~~C~H~fc~~Ci~~~~~~--------~~~CP~Cr~~~~~ 64 (78)
T 2ect_A 14 SGLECPVCKEDYALGES-VRQLPCNHLFHDSCIVPWLEQ--------HDSCPVCRKSLTG 64 (78)
T ss_dssp SSCCCTTTTSCCCTTSC-EEECTTSCEEETTTTHHHHTT--------TCSCTTTCCCCCC
T ss_pred CCCCCeeCCccccCCCC-EEEeCCCCeecHHHHHHHHHc--------CCcCcCcCCccCC
Confidence 35689999988853221 111259999999999887421 2578888776654
No 35
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=90.24 E-value=0.13 Score=32.19 Aligned_cols=50 Identities=18% Similarity=0.398 Sum_probs=33.0
Q ss_pred ccCCCccccCccccccccccccccccceecCCCCCCccccCCCCCCCceeeChhhHHHH
Q psy509 27 MDGDTCHRCRTTFSLVQRKHHCRACGQVFCQLCSSKSTSLPKFGIEKEVRVCEDCHEKF 85 (158)
Q Consensus 27 ~~~~~C~~C~~~F~~~~RkhhCr~CG~vfC~~Cs~~~~~lp~~~~~~~~RVC~~C~~~l 85 (158)
.+...|.+|...|.--.. -.||++||..|...+... ......|..|...+
T Consensus 18 ~~~~~C~IC~~~~~~~~~----~~CgH~fC~~Ci~~~~~~-----~~~~~~CP~Cr~~~ 67 (73)
T 2ysl_A 18 QEEVICPICLDILQKPVT----IDCGHNFCLKCITQIGET-----SCGFFKCPLCKTSV 67 (73)
T ss_dssp CCCCBCTTTCSBCSSEEE----CTTCCEEEHHHHHHHCSS-----SCSCCCCSSSCCCC
T ss_pred ccCCEeccCCcccCCeEE----cCCCChhhHHHHHHHHHc-----CCCCCCCCCCCCcC
Confidence 345689999987763211 279999999998876431 12345677776544
No 36
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=90.24 E-value=0.24 Score=31.56 Aligned_cols=55 Identities=22% Similarity=0.500 Sum_probs=34.7
Q ss_pred cccCCCccccCccccccccccccccccceecCCCCCCccccCCCCCCCceeeChhhHHHHh
Q psy509 26 WMDGDTCHRCRTTFSLVQRKHHCRACGQVFCQLCSSKSTSLPKFGIEKEVRVCEDCHEKFT 86 (158)
Q Consensus 26 W~~~~~C~~C~~~F~~~~RkhhCr~CG~vfC~~Cs~~~~~lp~~~~~~~~RVC~~C~~~l~ 86 (158)
..+...|.+|...|.--.. -.||++||..|...+...... ......|..|...+.
T Consensus 16 ~~~~~~C~IC~~~~~~p~~----~~CgH~fC~~Ci~~~~~~~~~--~~~~~~CP~Cr~~~~ 70 (85)
T 2ecv_A 16 VKEEVTCPICLELLTQPLS----LDCGHSFCQACLTANHKKSML--DKGESSCPVCRISYQ 70 (85)
T ss_dssp CCCCCCCTTTCSCCSSCBC----CSSSCCBCTTHHHHHHHHHHH--TTSCCCCTTTCCSSC
T ss_pred ccCCCCCCCCCcccCCcee----CCCCCHHHHHHHHHHHHHhhc--CCCCCcCCCCCCccC
Confidence 3446789999988753211 269999999998765332100 112467887876654
No 37
>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=90.12 E-value=0.065 Score=32.37 Aligned_cols=33 Identities=30% Similarity=0.743 Sum_probs=26.9
Q ss_pred CCCcccC--CCccccCcccccc--cccccccccccee
Q psy509 23 APEWMDG--DTCHRCRTTFSLV--QRKHHCRACGQVF 55 (158)
Q Consensus 23 ~p~W~~~--~~C~~C~~~F~~~--~RkhhCr~CG~vf 55 (158)
-+.|.+. ..|..|++.|.++ .|+|-|..||..+
T Consensus 4 ~~~~~~~~~~~CPrCn~~f~~~~sLr~HmkycCp~~v 40 (49)
T 2e72_A 4 GSSGQDGGRKICPRCNAQFRVTEALRGHMCYCCPEMV 40 (49)
T ss_dssp SSSSCCSSCCCCTTTCCCCSSHHHHHHHHHHHCTTTC
T ss_pred CcccccCCceeCCcccccccchHHHHhhhhhcCcchh
Confidence 3567774 5899999999965 5899999999865
No 38
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=89.67 E-value=0.098 Score=32.66 Aligned_cols=47 Identities=28% Similarity=0.559 Sum_probs=35.5
Q ss_pred cCCCccccCccccccccccccccccceecCCCCCCccccCCCCCCCceeeChhhHHHHhc
Q psy509 28 DGDTCHRCRTTFSLVQRKHHCRACGQVFCQLCSSKSTSLPKFGIEKEVRVCEDCHEKFTN 87 (158)
Q Consensus 28 ~~~~C~~C~~~F~~~~RkhhCr~CG~vfC~~Cs~~~~~lp~~~~~~~~RVC~~C~~~l~~ 87 (158)
+...|.+|...|.- .--.||++||..|...+.. ....|..|...+..
T Consensus 14 ~~~~C~IC~~~~~~-----~~~~CgH~fc~~Ci~~~~~--------~~~~CP~Cr~~~~~ 60 (70)
T 2ecn_A 14 DEEECCICMDGRAD-----LILPCAHSFCQKCIDKWSD--------RHRNCPICRLQMTG 60 (70)
T ss_dssp CCCCCSSSCCSCCS-----EEETTTEEECHHHHHHSSC--------CCSSCHHHHHCTTC
T ss_pred CCCCCeeCCcCccC-----cccCCCCcccHHHHHHHHH--------CcCcCCCcCCcccC
Confidence 35689999887755 3356999999999887632 35689999887664
No 39
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=89.62 E-value=0.19 Score=29.64 Aligned_cols=36 Identities=17% Similarity=0.435 Sum_probs=27.3
Q ss_pred CCCccccCccccccccccccccccceecCCCCCCcc
Q psy509 29 GDTCHRCRTTFSLVQRKHHCRACGQVFCQLCSSKST 64 (158)
Q Consensus 29 ~~~C~~C~~~F~~~~RkhhCr~CG~vfC~~Cs~~~~ 64 (158)
...|.+|...|..-.+......||++||..|...++
T Consensus 5 ~~~C~IC~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~ 40 (55)
T 2ecm_A 5 SSGCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEML 40 (55)
T ss_dssp CCSCTTTCCCCCTTTSCEEECTTSCEEETTHHHHHH
T ss_pred CCcCcccChhhcCCCcCeEecCCCCcccHHHHHHHH
Confidence 457999998885444445556799999999987764
No 40
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=88.86 E-value=0.17 Score=32.07 Aligned_cols=53 Identities=19% Similarity=0.398 Sum_probs=34.1
Q ss_pred CCCccccCccccccccccccccccceecCCCCCCccccCCCCCCCceeeChhhHHHHh
Q psy509 29 GDTCHRCRTTFSLVQRKHHCRACGQVFCQLCSSKSTSLPKFGIEKEVRVCEDCHEKFT 86 (158)
Q Consensus 29 ~~~C~~C~~~F~~~~RkhhCr~CG~vfC~~Cs~~~~~lp~~~~~~~~RVC~~C~~~l~ 86 (158)
...|.+|...|.--.. -.||++||..|...+......+ ......|..|...+.
T Consensus 12 ~~~C~IC~~~~~~p~~----l~CgH~fC~~Ci~~~~~~~~~~-~~~~~~CP~Cr~~~~ 64 (79)
T 2egp_A 12 EVTCPICLELLTEPLS----LDCGHSLCRACITVSNKEAVTS-MGGKSSCPVCGISYS 64 (79)
T ss_dssp CCEETTTTEECSSCCC----CSSSCCCCHHHHSCCCCCCSSS-CCCCCCCSSSCCCCC
T ss_pred CCCCcCCCcccCCeeE----CCCCCHHHHHHHHHHHHhcccC-CCCCCcCCCCCCcCC
Confidence 4579999988753211 2699999999998765432111 123567777765543
No 41
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=87.72 E-value=0.27 Score=31.72 Aligned_cols=53 Identities=21% Similarity=0.399 Sum_probs=35.8
Q ss_pred cCCCccccCccccccccccccccccceecCCCCCCccccCCCCCCCceeeChhhHHHH
Q psy509 28 DGDTCHRCRTTFSLVQRKHHCRACGQVFCQLCSSKSTSLPKFGIEKEVRVCEDCHEKF 85 (158)
Q Consensus 28 ~~~~C~~C~~~F~~~~RkhhCr~CG~vfC~~Cs~~~~~lp~~~~~~~~RVC~~C~~~l 85 (158)
+...|.+|...|....+.-.--.||++||..|...+.... .....|..|...+
T Consensus 14 ~~~~C~IC~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~~~-----~~~~~CP~Cr~~~ 66 (88)
T 2ct2_A 14 EVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASS-----INGVRCPFCSKIT 66 (88)
T ss_dssp SCCBCTTTCCBCCTTSSCEEECSSSCEEEHHHHHHHHHHC-----SSCBCCTTTCCCB
T ss_pred CCCCCccCCccccccCCCeEECCCCChhhHHHHHHHHHcC-----CCCcCCCCCCCcc
Confidence 4568999999887643323334799999999988764321 1246788886654
No 42
>2klz_A Ataxin-3; UIM, ubiquitin-binding, hydrolase, neurodegenerati nucleus, phosphoprotein, spinocerebellar ataxia, transcript transcription regulation; NMR {Homo sapiens}
Probab=85.50 E-value=0.35 Score=29.22 Aligned_cols=16 Identities=38% Similarity=0.445 Sum_probs=13.4
Q ss_pred hcchHHHHHHHHhcHH
Q psy509 134 LKEEEELQLALALSQS 149 (158)
Q Consensus 134 ~~eeedl~~aia~Sl~ 149 (158)
++||.||+.||.||+.
T Consensus 24 EDeeadLrrAiqLSmQ 39 (52)
T 2klz_A 24 EDEEADLRRAIQLSMQ 39 (52)
T ss_dssp SSSHHHHHHHHHHHHT
T ss_pred chhHHHHHHHHHHHhh
Confidence 4567799999999985
No 43
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=85.23 E-value=0.21 Score=31.28 Aligned_cols=47 Identities=26% Similarity=0.542 Sum_probs=32.0
Q ss_pred cCCCccccCccccccccccccccccceecCCCCCCccccCCCCCCCceeeChhhHHHHh
Q psy509 28 DGDTCHRCRTTFSLVQRKHHCRACGQVFCQLCSSKSTSLPKFGIEKEVRVCEDCHEKFT 86 (158)
Q Consensus 28 ~~~~C~~C~~~F~~~~RkhhCr~CG~vfC~~Cs~~~~~lp~~~~~~~~RVC~~C~~~l~ 86 (158)
+...|.+|...|..- .--.||++||..|...++.. ...|-.|...+.
T Consensus 14 ~~~~C~IC~~~~~~~----~~~~CgH~fC~~Ci~~~~~~--------~~~CP~Cr~~~~ 60 (71)
T 2d8t_A 14 TVPECAICLQTCVHP----VSLPCKHVFCYLCVKGASWL--------GKRCALCRQEIP 60 (71)
T ss_dssp SCCBCSSSSSBCSSE----EEETTTEEEEHHHHHHCTTC--------SSBCSSSCCBCC
T ss_pred CCCCCccCCcccCCC----EEccCCCHHHHHHHHHHHHC--------CCcCcCcCchhC
Confidence 456899998877432 11269999999998776421 156777766654
No 44
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=84.81 E-value=0.42 Score=32.99 Aligned_cols=44 Identities=23% Similarity=0.528 Sum_probs=30.2
Q ss_pred CCCccccCccccccccccccccccceecCCCCCCccccCCCCCCCceeeChhhHHHH
Q psy509 29 GDTCHRCRTTFSLVQRKHHCRACGQVFCQLCSSKSTSLPKFGIEKEVRVCEDCHEKF 85 (158)
Q Consensus 29 ~~~C~~C~~~F~~~~RkhhCr~CG~vfC~~Cs~~~~~lp~~~~~~~~RVC~~C~~~l 85 (158)
.-.|.+|...|. ....-..||++||..|...+.. ..|..|...+
T Consensus 22 ~~~C~IC~~~~~---~pv~~~~CgH~fC~~Ci~~~~~----------~~CP~Cr~~~ 65 (117)
T 1jm7_B 22 LLRCSRCTNILR---EPVCLGGCEHIFCSNCVSDCIG----------TGCPVCYTPA 65 (117)
T ss_dssp TTSCSSSCSCCS---SCBCCCSSSCCBCTTTGGGGTT----------TBCSSSCCBC
T ss_pred CCCCCCCChHhh---CccEeCCCCCHHHHHHHHHHhc----------CCCcCCCCcC
Confidence 458999987764 2222227999999999987642 4677776554
No 45
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=84.37 E-value=0.073 Score=36.55 Aligned_cols=57 Identities=14% Similarity=0.353 Sum_probs=37.5
Q ss_pred cCCCccccCccccccc--------------cccccccccceecCCCCCCccccCCCCCCCceeeChhhHHHHhc
Q psy509 28 DGDTCHRCRTTFSLVQ--------------RKHHCRACGQVFCQLCSSKSTSLPKFGIEKEVRVCEDCHEKFTN 87 (158)
Q Consensus 28 ~~~~C~~C~~~F~~~~--------------RkhhCr~CG~vfC~~Cs~~~~~lp~~~~~~~~RVC~~C~~~l~~ 87 (158)
+...|.+|...|..-. ....--.||++||..|...++.... ......|-.|...+..
T Consensus 24 ~~~~C~ICl~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~H~Fh~~Ci~~wl~~~~---~~~~~~CP~CR~~~~~ 94 (114)
T 1v87_A 24 PEEDCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKCSHAFHLLCLLAMYCNGN---KDGSLQCPSCKTIYGE 94 (114)
T ss_dssp CSCEETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSSCCEECHHHHHHHHHHTC---CSSCCBCTTTCCBSSS
T ss_pred CCCcCccCChhhcCcccccccccccccCcccceecCCCCCcccHHHHHHHHHccc---CCCCCcCCCCCCccCC
Confidence 3468999998885321 1111457999999999988753211 1345689999876654
No 46
>2lva_A Ubiquitin carboxyl-terminal hydrolase 28; UIM, ubiquitin interacting motif, UBA domain, NESG, northeas structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=84.42 E-value=0.21 Score=35.97 Aligned_cols=17 Identities=41% Similarity=0.556 Sum_probs=14.7
Q ss_pred cchHHHHHHHHhcHHHH
Q psy509 135 KEEEELQLALALSQSEA 151 (158)
Q Consensus 135 ~eeedl~~aia~Sl~e~ 151 (158)
+..+|||.|||+||.|.
T Consensus 94 d~KDDLQ~AIALSLqES 110 (129)
T 2lva_A 94 DNKDDLQAAIALSLLES 110 (129)
Confidence 45899999999999874
No 47
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=83.79 E-value=0.39 Score=29.50 Aligned_cols=26 Identities=31% Similarity=0.715 Sum_probs=19.8
Q ss_pred CccccCccccc------------cccccccccccceec
Q psy509 31 TCHRCRTTFSL------------VQRKHHCRACGQVFC 56 (158)
Q Consensus 31 ~C~~C~~~F~~------------~~RkhhCr~CG~vfC 56 (158)
.|..|++.|.. -.|.+.|..||+.|-
T Consensus 6 ~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~ 43 (60)
T 4gzn_C 6 FCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFR 43 (60)
T ss_dssp ECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEES
T ss_pred cCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcC
Confidence 68999999962 245678888888873
No 48
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=83.74 E-value=0.32 Score=29.79 Aligned_cols=37 Identities=30% Similarity=0.627 Sum_probs=27.2
Q ss_pred cCCCccccCcccccc---ccccccccccceecCCCCCCcc
Q psy509 28 DGDTCHRCRTTFSLV---QRKHHCRACGQVFCQLCSSKST 64 (158)
Q Consensus 28 ~~~~C~~C~~~F~~~---~RkhhCr~CG~vfC~~Cs~~~~ 64 (158)
+...|.+|...|.-- .+...-..||++||..|...++
T Consensus 14 ~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~ 53 (69)
T 2ea6_A 14 GTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSL 53 (69)
T ss_dssp CCCCCTTTCCCHHHHTTTTCCEEECSSSCEEEHHHHHHHH
T ss_pred CCCCCcccCccccccccccCCeEeCCCCChhcHHHHHHHH
Confidence 456899999887632 2233456899999999987764
No 49
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=83.52 E-value=0.77 Score=28.95 Aligned_cols=48 Identities=21% Similarity=0.573 Sum_probs=31.4
Q ss_pred cCCCccccCccccccccccccccccceecCCCCCCccccCCCCCCCceeeChhhHHH
Q psy509 28 DGDTCHRCRTTFSLVQRKHHCRACGQVFCQLCSSKSTSLPKFGIEKEVRVCEDCHEK 84 (158)
Q Consensus 28 ~~~~C~~C~~~F~~~~RkhhCr~CG~vfC~~Cs~~~~~lp~~~~~~~~RVC~~C~~~ 84 (158)
+...|.+|...|.- ...-..||++||..|...+.... ..+.|..|...
T Consensus 14 ~~~~C~IC~~~~~~---p~~~~~CgH~fC~~Ci~~~~~~~------~~~~CP~Cr~~ 61 (74)
T 2yur_A 14 DELLCLICKDIMTD---AVVIPCCGNSYCDECIRTALLES------DEHTCPTCHQN 61 (74)
T ss_dssp GGGSCSSSCCCCTT---CEECSSSCCEECTTHHHHHHHHS------SSSCCSSSCCS
T ss_pred CCCCCcCCChHHhC---CeEcCCCCCHHHHHHHHHHHHhc------CCCcCCCCCCc
Confidence 34589999876652 23334499999999987764321 13467777653
No 50
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=83.44 E-value=0.27 Score=33.12 Aligned_cols=47 Identities=17% Similarity=0.487 Sum_probs=33.8
Q ss_pred CCCccccCccccccccccccccccceecCCCCCCccccCCCCCCCceeeChhhHHHH
Q psy509 29 GDTCHRCRTTFSLVQRKHHCRACGQVFCQLCSSKSTSLPKFGIEKEVRVCEDCHEKF 85 (158)
Q Consensus 29 ~~~C~~C~~~F~~~~RkhhCr~CG~vfC~~Cs~~~~~lp~~~~~~~~RVC~~C~~~l 85 (158)
...|.+|...|. ....|-.||++||..|...+.... ...|..|...+
T Consensus 22 ~~~C~IC~~~~~---~p~~~~~CgH~FC~~Ci~~~~~~~-------~~~CP~Cr~~~ 68 (100)
T 3lrq_A 22 VFRCFICMEKLR---DARLCPHCSKLCCFSCIRRWLTEQ-------RAQCPHCRAPL 68 (100)
T ss_dssp HTBCTTTCSBCS---SEEECTTTCCEEEHHHHHHHHHHT-------CSBCTTTCCBC
T ss_pred CCCCccCCcccc---CccccCCCCChhhHHHHHHHHHHC-------cCCCCCCCCcC
Confidence 458999988764 345668999999999988764321 15777777654
No 51
>2ct7_A Ring finger protein 31; IBR, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.4
Probab=82.58 E-value=0.76 Score=30.39 Aligned_cols=32 Identities=31% Similarity=0.747 Sum_probs=23.7
Q ss_pred ccccCccccc--cccccccccccceecCCCCCCc
Q psy509 32 CHRCRTTFSL--VQRKHHCRACGQVFCQLCSSKS 63 (158)
Q Consensus 32 C~~C~~~F~~--~~RkhhCr~CG~vfC~~Cs~~~ 63 (158)
|..|+..|.. ..++..|..||..||..|...+
T Consensus 28 CP~C~~~~~~~~~~~~v~C~~C~~~FC~~C~~~w 61 (86)
T 2ct7_A 28 CAQCSFGFIYEREQLEATCPQCHQTFCVRCKRQW 61 (86)
T ss_dssp CSSSCCCEECCCSCSCEECTTTCCEECSSSCSBC
T ss_pred CcCCCchheecCCCCceEeCCCCCccccccCCch
Confidence 6677775532 2456789999999999998643
No 52
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=81.99 E-value=0.11 Score=34.48 Aligned_cols=48 Identities=19% Similarity=0.321 Sum_probs=31.8
Q ss_pred CCCccccCccccccccccccccccceecCCCCCCccccCCCCCCCceeeChhhHHHH
Q psy509 29 GDTCHRCRTTFSLVQRKHHCRACGQVFCQLCSSKSTSLPKFGIEKEVRVCEDCHEKF 85 (158)
Q Consensus 29 ~~~C~~C~~~F~~~~RkhhCr~CG~vfC~~Cs~~~~~lp~~~~~~~~RVC~~C~~~l 85 (158)
...|.+|...|..-.. ..--.||++||..|...+... ...|..|...+
T Consensus 40 ~~~C~IC~~~~~~~~~-~~~l~C~H~Fh~~Ci~~wl~~--------~~~CP~Cr~~~ 87 (91)
T 2l0b_A 40 EMCCPICCSEYVKGDV-ATELPCHHYFHKPCVSIWLQK--------SGTCPVCRCMF 87 (91)
T ss_dssp CSEETTTTEECCTTCE-EEEETTTEEEEHHHHHHHHTT--------TCBCTTTCCBS
T ss_pred CCCCcccChhhcCCCc-EEecCCCChHHHHHHHHHHHc--------CCcCcCcCccC
Confidence 4579999988864222 222349999999998877421 23677776543
No 53
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=81.42 E-value=0.17 Score=35.33 Aligned_cols=47 Identities=19% Similarity=0.405 Sum_probs=31.9
Q ss_pred CCCccccCccccccccccccccccceecCCCCCCccccCCCCCCCceeeChhhHHHHh
Q psy509 29 GDTCHRCRTTFSLVQRKHHCRACGQVFCQLCSSKSTSLPKFGIEKEVRVCEDCHEKFT 86 (158)
Q Consensus 29 ~~~C~~C~~~F~~~~RkhhCr~CG~vfC~~Cs~~~~~lp~~~~~~~~RVC~~C~~~l~ 86 (158)
...|.+|...|.--. --.||++||..|...+.. .....|..|...+.
T Consensus 52 ~~~C~IC~~~~~~p~----~~~CgH~fC~~Ci~~~~~-------~~~~~CP~Cr~~~~ 98 (124)
T 3fl2_A 52 TFQCICCQELVFRPI----TTVCQHNVCKDCLDRSFR-------AQVFSCPACRYDLG 98 (124)
T ss_dssp HTBCTTTSSBCSSEE----ECTTSCEEEHHHHHHHHH-------TTCCBCTTTCCBCC
T ss_pred CCCCCcCChHHcCcE----EeeCCCcccHHHHHHHHh-------HCcCCCCCCCccCC
Confidence 357999988776221 127999999999876643 12357888876553
No 54
>3a1q_C Ubiquitin interaction motif-containing protein 1; protein complex, cytoplasm, nucleus, phosphoprotein, UBL conjugation, transcription regulation; 2.20A {Mus musculus}
Probab=80.56 E-value=0.72 Score=26.82 Aligned_cols=18 Identities=50% Similarity=0.434 Sum_probs=13.2
Q ss_pred hhhcchHHHHHHHHhcHH
Q psy509 132 EELKEEEELQLALALSQS 149 (158)
Q Consensus 132 ~~~~eeedl~~aia~Sl~ 149 (158)
.++.||+-|++|||-||.
T Consensus 27 ~eE~EdellrKAIaESLn 44 (45)
T 3a1q_C 27 QEEKEEELLRKAIAESLN 44 (45)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhc
Confidence 345677778888888774
No 55
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=80.29 E-value=0.18 Score=36.90 Aligned_cols=46 Identities=20% Similarity=0.474 Sum_probs=32.2
Q ss_pred CCccccCccccccccccccccccceecCCCCCCccccCCCCCCCceeeChhhHHHH
Q psy509 30 DTCHRCRTTFSLVQRKHHCRACGQVFCQLCSSKSTSLPKFGIEKEVRVCEDCHEKF 85 (158)
Q Consensus 30 ~~C~~C~~~F~~~~RkhhCr~CG~vfC~~Cs~~~~~lp~~~~~~~~RVC~~C~~~l 85 (158)
..|.+|...|.- ......||++||..|...+... ....|..|...+
T Consensus 55 ~~C~IC~~~~~~---p~~~~~CgH~fC~~Ci~~~~~~-------~~~~CP~Cr~~~ 100 (165)
T 2ckl_B 55 LMCPICLDMLKN---TMTTKECLHRFCADCIITALRS-------GNKECPTCRKKL 100 (165)
T ss_dssp HBCTTTSSBCSS---EEEETTTCCEEEHHHHHHHHHT-------TCCBCTTTCCBC
T ss_pred CCCcccChHhhC---cCEeCCCCChhHHHHHHHHHHh-------CcCCCCCCCCcC
Confidence 379999877653 3344589999999998876431 135687786654
No 56
>2jrp_A Putative cytoplasmic protein; two-zinc binding protein, structural genomics, PSI-2, protein structure initiative; NMR {Salmonella typhimurium LT2}
Probab=80.12 E-value=0.59 Score=31.16 Aligned_cols=56 Identities=21% Similarity=0.496 Sum_probs=34.0
Q ss_pred CCccccCccccccccccccccccce-----ecCCCCCCccccCCCCCCCceeeChhhHHHHhc
Q psy509 30 DTCHRCRTTFSLVQRKHHCRACGQV-----FCQLCSSKSTSLPKFGIEKEVRVCEDCHEKFTN 87 (158)
Q Consensus 30 ~~C~~C~~~F~~~~RkhhCr~CG~v-----fC~~Cs~~~~~lp~~~~~~~~RVC~~C~~~l~~ 87 (158)
..|..|+....+-.+.+||..||.- ||..|-.....++.=| ...-.|..|...+++
T Consensus 3 ~~CP~C~~~l~~~~~~~~C~~C~~~~~~~afCPeCgq~Le~lkACG--A~~yFC~~C~~LiSk 63 (81)
T 2jrp_A 3 ITCPVCHHALERNGDTAHCETCAKDFSLQALCPDCRQPLQVLKACG--AVDYFCQNGHGLISK 63 (81)
T ss_dssp CCCSSSCSCCEECSSEEECTTTCCEEEEEEECSSSCSCCCEEEETT--EEEECCTTTTCCCCT
T ss_pred CCCCCCCCccccCCCceECccccccCCCcccCcchhhHHHHHHhcC--CcCeeeccCCCEeec
Confidence 3677888777777777778888764 6777765543333222 124556666655543
No 57
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=79.38 E-value=0.81 Score=28.57 Aligned_cols=49 Identities=16% Similarity=0.376 Sum_probs=33.4
Q ss_pred cCCCccccCccccccccccccccccceecCCCCCCccccCCCCCCCceeeChhhHHHHhc
Q psy509 28 DGDTCHRCRTTFSLVQRKHHCRACGQVFCQLCSSKSTSLPKFGIEKEVRVCEDCHEKFTN 87 (158)
Q Consensus 28 ~~~~C~~C~~~F~~~~RkhhCr~CG~vfC~~Cs~~~~~lp~~~~~~~~RVC~~C~~~l~~ 87 (158)
+...|.+|...|.- ...-..||++||..|...+... ...|..|...+..
T Consensus 14 ~~~~C~IC~~~~~~---p~~~~~CgH~fC~~Ci~~~~~~--------~~~CP~Cr~~~~~ 62 (72)
T 2djb_A 14 PYILCSICKGYLID---ATTITECLHTFCKSCIVRHFYY--------SNRCPKCNIVVHQ 62 (72)
T ss_dssp GGGSCTTTSSCCSS---CEECSSSCCEECHHHHHHHHHH--------CSSCTTTCCCCCS
T ss_pred CCCCCCCCChHHHC---cCEECCCCCHHHHHHHHHHHHc--------CCcCCCcCcccCc
Confidence 35689999877642 2333479999999998776421 3567777665543
No 58
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=79.08 E-value=0.23 Score=33.18 Aligned_cols=46 Identities=26% Similarity=0.548 Sum_probs=31.1
Q ss_pred CCccccCccccccccccccccccceecCCCCCCccccCCCCCCCceeeChhhHHHHh
Q psy509 30 DTCHRCRTTFSLVQRKHHCRACGQVFCQLCSSKSTSLPKFGIEKEVRVCEDCHEKFT 86 (158)
Q Consensus 30 ~~C~~C~~~F~~~~RkhhCr~CG~vfC~~Cs~~~~~lp~~~~~~~~RVC~~C~~~l~ 86 (158)
..|.+|...|.- ......||++||..|...+... ...|..|...+.
T Consensus 23 ~~C~IC~~~~~~---p~~~~~CgH~fC~~Ci~~~~~~--------~~~CP~Cr~~~~ 68 (99)
T 2y43_A 23 LRCGICFEYFNI---AMIIPQCSHNYCSLCIRKFLSY--------KTQCPTCCVTVT 68 (99)
T ss_dssp TBCTTTCSBCSS---EEECTTTCCEEEHHHHHHHHTT--------CCBCTTTCCBCC
T ss_pred CCcccCChhhCC---cCEECCCCCHhhHHHHHHHHHC--------CCCCCCCCCcCC
Confidence 579999887753 2223479999999998776431 246777765443
No 59
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=79.02 E-value=0.92 Score=28.69 Aligned_cols=55 Identities=16% Similarity=0.382 Sum_probs=35.0
Q ss_pred cccCCCccccCccccccccccccccccceecCCCCCCccccCCCCCCCceeeChhhHHHHh
Q psy509 26 WMDGDTCHRCRTTFSLVQRKHHCRACGQVFCQLCSSKSTSLPKFGIEKEVRVCEDCHEKFT 86 (158)
Q Consensus 26 W~~~~~C~~C~~~F~~~~RkhhCr~CG~vfC~~Cs~~~~~lp~~~~~~~~RVC~~C~~~l~ 86 (158)
..+...|.+|...|.--. . -.||++||..|...+..... .......|..|...+.
T Consensus 16 ~~~~~~C~IC~~~~~~p~---~-~~CgH~fC~~Ci~~~~~~~~--~~~~~~~CP~Cr~~~~ 70 (85)
T 2ecw_A 16 IKEEVTCPICLELLKEPV---S-ADCNHSFCRACITLNYESNR--NTDGKGNCPVCRVPYP 70 (85)
T ss_dssp CCTTTSCTTTCSCCSSCE---E-CTTSCCBCHHHHHHHHHHSB--CTTSCBCCTTTCCCCC
T ss_pred CccCCCCcCCChhhCcce---e-CCCCCHHHHHHHHHHHHhcc--CCCCCCCCCCCCCcCC
Confidence 345678999988775322 2 35999999999876543221 0123567888866544
No 60
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=78.93 E-value=0.83 Score=30.02 Aligned_cols=26 Identities=23% Similarity=0.675 Sum_probs=18.6
Q ss_pred CCccccCccccc------------ccccccccccccee
Q psy509 30 DTCHRCRTTFSL------------VQRKHHCRACGQVF 55 (158)
Q Consensus 30 ~~C~~C~~~F~~------------~~RkhhCr~CG~vf 55 (158)
..|..|++.|.. -.+.+.|..||+.|
T Consensus 29 h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F 66 (85)
T 2lv2_A 29 HLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATF 66 (85)
T ss_dssp EECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEE
T ss_pred EECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEe
Confidence 479999999963 13456677777776
No 61
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=77.84 E-value=0.22 Score=30.74 Aligned_cols=46 Identities=24% Similarity=0.673 Sum_probs=30.6
Q ss_pred CCCccccCccccccccccccccccceecCCCCCCccccCCCCCCCceeeChhhHHHH
Q psy509 29 GDTCHRCRTTFSLVQRKHHCRACGQVFCQLCSSKSTSLPKFGIEKEVRVCEDCHEKF 85 (158)
Q Consensus 29 ~~~C~~C~~~F~~~~RkhhCr~CG~vfC~~Cs~~~~~lp~~~~~~~~RVC~~C~~~l 85 (158)
...|.+|...|.--.. -.||++||..|...+.. .....|..|...+
T Consensus 15 ~~~C~IC~~~~~~p~~----~~CgH~fC~~Ci~~~~~-------~~~~~CP~Cr~~~ 60 (66)
T 2ecy_A 15 KYKCEKCHLVLCSPKQ----TECGHRFCESCMAALLS-------SSSPKCTACQESI 60 (66)
T ss_dssp CEECTTTCCEESSCCC----CSSSCCCCHHHHHHHHT-------TSSCCCTTTCCCC
T ss_pred CCCCCCCChHhcCeeE----CCCCCHHHHHHHHHHHH-------hCcCCCCCCCcCC
Confidence 4579999887652211 48999999999887642 1234577675543
No 62
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=77.83 E-value=0.31 Score=34.76 Aligned_cols=44 Identities=20% Similarity=0.493 Sum_probs=29.9
Q ss_pred CCccccCccccccccccccccccceecCCCCCCccccCCCCCCCceeeChhhHHHH
Q psy509 30 DTCHRCRTTFSLVQRKHHCRACGQVFCQLCSSKSTSLPKFGIEKEVRVCEDCHEKF 85 (158)
Q Consensus 30 ~~C~~C~~~F~~~~RkhhCr~CG~vfC~~Cs~~~~~lp~~~~~~~~RVC~~C~~~l 85 (158)
..|.+|...|.-- .--.||++||..|...+.. ....|..|...+
T Consensus 54 ~~C~iC~~~~~~~----~~~~CgH~fc~~Ci~~~~~--------~~~~CP~Cr~~~ 97 (138)
T 4ayc_A 54 LQCIICSEYFIEA----VTLNCAHSFCSYCINEWMK--------RKIECPICRKDI 97 (138)
T ss_dssp SBCTTTCSBCSSE----EEETTSCEEEHHHHHHHTT--------TCSBCTTTCCBC
T ss_pred CCCcccCcccCCc----eECCCCCCccHHHHHHHHH--------cCCcCCCCCCcC
Confidence 4699998877421 2236999999999876532 224588886543
No 63
>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=77.83 E-value=0.65 Score=27.93 Aligned_cols=25 Identities=24% Similarity=0.574 Sum_probs=16.4
Q ss_pred CccccCccccc---c------cccccccccccee
Q psy509 31 TCHRCRTTFSL---V------QRKHHCRACGQVF 55 (158)
Q Consensus 31 ~C~~C~~~F~~---~------~RkhhCr~CG~vf 55 (158)
.|..|++.|+. + .+.+.|..||..|
T Consensus 16 ~C~~C~k~F~~~~~l~~~H~~~k~~~C~~C~k~f 49 (62)
T 1vd4_A 16 KCPVCSSTFTDLEANQLFDPMTGTFRCTFCHTEV 49 (62)
T ss_dssp ECSSSCCEEEHHHHHHHEETTTTEEBCSSSCCBC
T ss_pred cCCCCCchhccHHHhHhhcCCCCCEECCCCCCcc
Confidence 68889988863 2 2345666666665
No 64
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=77.46 E-value=1.2 Score=25.58 Aligned_cols=25 Identities=20% Similarity=0.519 Sum_probs=16.8
Q ss_pred CccccCcccccc------------cccccccccccee
Q psy509 31 TCHRCRTTFSLV------------QRKHHCRACGQVF 55 (158)
Q Consensus 31 ~C~~C~~~F~~~------------~RkhhCr~CG~vf 55 (158)
.|..|++.|... .+.+.|..||..|
T Consensus 6 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f 42 (57)
T 3uk3_C 6 ECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAA 42 (57)
T ss_dssp BCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEE
T ss_pred cCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchh
Confidence 688999999631 2345677777665
No 65
>2rr9_C Putative uncharacterized protein UIMC1; Lys63-linked diubiquitin, ubiquitin-interacting motif, ubiqu RAP80, DNA repair, nuclear protein; NMR {Homo sapiens}
Probab=77.30 E-value=1.6 Score=25.42 Aligned_cols=16 Identities=56% Similarity=0.775 Sum_probs=10.4
Q ss_pred chHHHHHHHHhcHHHH
Q psy509 136 EEEELQLALALSQSEA 151 (158)
Q Consensus 136 eeedl~~aia~Sl~e~ 151 (158)
|||.|.+|+.+|-.|+
T Consensus 3 EEEq~ALA~kmSeQEA 18 (46)
T 2rr9_C 3 EEEQFALALKMSEQEA 18 (46)
T ss_dssp SHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhHHHH
Confidence 5677777776665554
No 66
>2rr9_C Putative uncharacterized protein UIMC1; Lys63-linked diubiquitin, ubiquitin-interacting motif, ubiqu RAP80, DNA repair, nuclear protein; NMR {Homo sapiens}
Probab=77.26 E-value=1 Score=26.25 Aligned_cols=20 Identities=40% Similarity=0.365 Sum_probs=16.1
Q ss_pred hhhhcchHHHHHHHHhcHHH
Q psy509 131 EEELKEEEELQLALALSQSE 150 (158)
Q Consensus 131 ~~~~~eeedl~~aia~Sl~e 150 (158)
..++.||+-|++|||-||.+
T Consensus 23 ~~eE~E~~llrKAIaESLn~ 42 (46)
T 2rr9_C 23 SQEEEEEELLRKAIAESLNS 42 (46)
T ss_dssp HHHHHHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHHHHHHHh
Confidence 34567788899999999864
No 67
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=76.99 E-value=1.1 Score=26.40 Aligned_cols=33 Identities=21% Similarity=0.502 Sum_probs=24.1
Q ss_pred cCCCccccCccccccccccccccccceecCCCCCCcc
Q psy509 28 DGDTCHRCRTTFSLVQRKHHCRACGQVFCQLCSSKST 64 (158)
Q Consensus 28 ~~~~C~~C~~~F~~~~RkhhCr~CG~vfC~~Cs~~~~ 64 (158)
+...|.+|...|.--. --.||++||..|...+.
T Consensus 14 ~~~~C~IC~~~~~~p~----~~~CgH~fC~~Ci~~~~ 46 (58)
T 2ecj_A 14 VEASCSVCLEYLKEPV----IIECGHNFCKACITRWW 46 (58)
T ss_dssp CCCBCSSSCCBCSSCC----CCSSCCCCCHHHHHHHT
T ss_pred cCCCCccCCcccCccE----eCCCCCccCHHHHHHHH
Confidence 3468999988775321 13699999999987763
No 68
>1wys_A Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc binding, NPPSFA, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus}
Probab=76.84 E-value=1.6 Score=28.62 Aligned_cols=29 Identities=28% Similarity=0.848 Sum_probs=21.9
Q ss_pred CCCccc--cCccccccccccccccccceecCCCC
Q psy509 29 GDTCHR--CRTTFSLVQRKHHCRACGQVFCQLCS 60 (158)
Q Consensus 29 ~~~C~~--C~~~F~~~~RkhhCr~CG~vfC~~Cs 60 (158)
...|.. |++. .++ ...|+.||.+||...-
T Consensus 14 g~~Cs~~~C~~~-dfl--pf~C~~C~~~FC~~HR 44 (75)
T 1wys_A 14 GQHCQVQHCRQR-DFL--PFVCDGCSGIFCLEHR 44 (75)
T ss_dssp CCCCSCTTTCCC-SCC--CEECTTTCCEECSTTC
T ss_pred CCCcCcccCCCc-cce--eeECcccCcCcCcccC
Confidence 457876 9876 343 7899999999988543
No 69
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=76.82 E-value=1.4 Score=25.21 Aligned_cols=10 Identities=20% Similarity=0.727 Sum_probs=8.2
Q ss_pred CccccCcccc
Q psy509 31 TCHRCRTTFS 40 (158)
Q Consensus 31 ~C~~C~~~F~ 40 (158)
.|..|++.|.
T Consensus 3 ~C~~C~~~f~ 12 (57)
T 1bbo_A 3 ICEECGIRXK 12 (57)
T ss_dssp BCTTTCCBCS
T ss_pred cCCCCcCcCC
Confidence 5888999886
No 70
>1x4v_A Hypothetical protein LOC130617; ZF-AN1 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=76.54 E-value=1.3 Score=27.98 Aligned_cols=27 Identities=33% Similarity=0.942 Sum_probs=20.2
Q ss_pred CCCccc--cCccccccccccccccccceecCC
Q psy509 29 GDTCHR--CRTTFSLVQRKHHCRACGQVFCQL 58 (158)
Q Consensus 29 ~~~C~~--C~~~F~~~~RkhhCr~CG~vfC~~ 58 (158)
...|.. |.+. .++ ..+|+.||..||..
T Consensus 12 ~~~Cs~~~Ck~~-~ll--~f~C~~C~~~FC~~ 40 (63)
T 1x4v_A 12 TNKCERAGCRQR-EMM--KLTCERCSRNFCIK 40 (63)
T ss_dssp CCCCCSTTCCCC-CSS--CCBCSSSCCBCCHH
T ss_pred CCCCCccCCCCC-Ccc--ceECCCCCcccCcc
Confidence 457876 8876 333 56999999999864
No 71
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=76.30 E-value=2 Score=25.61 Aligned_cols=30 Identities=17% Similarity=0.410 Sum_probs=22.2
Q ss_pred CCCccccCccccccccccccccccceecCCCCCC
Q psy509 29 GDTCHRCRTTFSLVQRKHHCRACGQVFCQLCSSK 62 (158)
Q Consensus 29 ~~~C~~C~~~F~~~~RkhhCr~CG~vfC~~Cs~~ 62 (158)
...|.+|...|.-- .--.||++||..|...
T Consensus 6 ~~~C~IC~~~~~~p----~~l~CgH~fC~~Ci~~ 35 (56)
T 1bor_A 6 FLRCQQCQAEAKCP----KLLPCLHTLCSGCLEA 35 (56)
T ss_dssp CSSCSSSCSSCBCC----SCSTTSCCSBTTTCSS
T ss_pred CCCceEeCCccCCe----EEcCCCCcccHHHHcc
Confidence 34799998877532 2246999999999765
No 72
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1
Probab=76.18 E-value=1.3 Score=27.10 Aligned_cols=48 Identities=19% Similarity=0.442 Sum_probs=32.9
Q ss_pred CCCccccCccccccccccccccccceecCCCCCCccccCCCCCCCceeeChhhHHHHhc
Q psy509 29 GDTCHRCRTTFSLVQRKHHCRACGQVFCQLCSSKSTSLPKFGIEKEVRVCEDCHEKFTN 87 (158)
Q Consensus 29 ~~~C~~C~~~F~~~~RkhhCr~CG~vfC~~Cs~~~~~lp~~~~~~~~RVC~~C~~~l~~ 87 (158)
...|.+|...|.- ...-..||++||..|...+.. ....|..|...+..
T Consensus 5 ~~~C~IC~~~~~~---~~~~~~C~H~fc~~Ci~~~~~--------~~~~CP~Cr~~~~~ 52 (68)
T 1chc_A 5 AERCPICLEDPSN---YSMALPCLHAFCYVCITRWIR--------QNPTCPLCKVPVES 52 (68)
T ss_dssp CCCCSSCCSCCCS---CEEETTTTEEESTTHHHHHHH--------HSCSTTTTCCCCCC
T ss_pred CCCCeeCCccccC---CcEecCCCCeeHHHHHHHHHh--------CcCcCcCCChhhHh
Confidence 4579999887753 123456999999999877642 12478888665544
No 73
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=75.73 E-value=1.4 Score=26.80 Aligned_cols=26 Identities=31% Similarity=0.906 Sum_probs=17.7
Q ss_pred CCccccCcccccc------------cccccccccccee
Q psy509 30 DTCHRCRTTFSLV------------QRKHHCRACGQVF 55 (158)
Q Consensus 30 ~~C~~C~~~F~~~------------~RkhhCr~CG~vf 55 (158)
-.|..|++.|... .+.+.|..||+.|
T Consensus 18 ~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f 55 (74)
T 2lce_A 18 YKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQF 55 (74)
T ss_dssp BCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEE
T ss_pred eECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchh
Confidence 4799999999631 2335677777666
No 74
>1g25_A CDK-activating kinase assembly factor MAT1; ring finger (C3HC4), metal binding protein; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=75.58 E-value=0.56 Score=28.69 Aligned_cols=51 Identities=22% Similarity=0.557 Sum_probs=30.5
Q ss_pred CCCccccCc-cccccccccccccccceecCCCCCCccccCCCCCCCceeeChhhHHHHh
Q psy509 29 GDTCHRCRT-TFSLVQRKHHCRACGQVFCQLCSSKSTSLPKFGIEKEVRVCEDCHEKFT 86 (158)
Q Consensus 29 ~~~C~~C~~-~F~~~~RkhhCr~CG~vfC~~Cs~~~~~lp~~~~~~~~RVC~~C~~~l~ 86 (158)
...|.+|.. .|.--.++..=..||++||..|...+..- ....|..|...+.
T Consensus 3 ~~~C~IC~~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~~-------~~~~CP~Cr~~~~ 54 (65)
T 1g25_A 3 DQGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFVR-------GAGNCPECGTPLR 54 (65)
T ss_dssp TTCCSTTTTHHHHCSSCCEEECTTCCCEEHHHHHHHHHT-------TSSSCTTTCCCCS
T ss_pred CCcCCcCCCCccCCCccCeecCCCCCHhHHHHHHHHHHc-------CCCcCCCCCCccc
Confidence 357899987 55432222122479999999998765321 1245766755443
No 75
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=75.35 E-value=0.88 Score=30.63 Aligned_cols=47 Identities=21% Similarity=0.505 Sum_probs=30.5
Q ss_pred CCccccCccccccccccccccccceecCCCCCCccccCCCCCCCceeeChhhHHHH
Q psy509 30 DTCHRCRTTFSLVQRKHHCRACGQVFCQLCSSKSTSLPKFGIEKEVRVCEDCHEKF 85 (158)
Q Consensus 30 ~~C~~C~~~F~~~~RkhhCr~CG~vfC~~Cs~~~~~lp~~~~~~~~RVC~~C~~~l 85 (158)
..|.+|...|.--. --.||++||..|...+.... .....|..|...+
T Consensus 22 ~~C~IC~~~~~~p~----~~~CgH~fC~~Ci~~~~~~~-----~~~~~CP~Cr~~~ 68 (112)
T 1jm7_A 22 LECPICLELIKEPV----STKCDHIFCKFCMLKLLNQK-----KGPSQCPLCKNDI 68 (112)
T ss_dssp TSCSSSCCCCSSCC----BCTTSCCCCSHHHHHHHHSS-----SSSCCCTTTSCCC
T ss_pred CCCcccChhhcCeE----ECCCCCHHHHHHHHHHHHhC-----CCCCCCcCCCCcC
Confidence 47999988774211 13799999999987764321 1225677775543
No 76
>1wd2_A Ariadne-1 protein homolog; ring, IBR, triad, zinc finger, ligase; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=75.19 E-value=2.7 Score=26.06 Aligned_cols=35 Identities=26% Similarity=0.630 Sum_probs=26.1
Q ss_pred CCCccccCcccccc--cccccccc--ccceecCCCCCCc
Q psy509 29 GDTCHRCRTTFSLV--QRKHHCRA--CGQVFCQLCSSKS 63 (158)
Q Consensus 29 ~~~C~~C~~~F~~~--~RkhhCr~--CG~vfC~~Cs~~~ 63 (158)
...|..|+...... --...|+. ||..||..|...+
T Consensus 6 ~k~CP~C~~~Iek~~GCnhmtC~~~~C~~~FCw~C~~~~ 44 (60)
T 1wd2_A 6 TKECPKCHVTIEKDGGCNHMVCRNQNCKAEFCWVCLGPW 44 (60)
T ss_dssp CCCCTTTCCCCSSCCSCCSSSCCSSGGGSCCSSSSCSCS
T ss_pred ceECcCCCCeeEeCCCCCcEEECCCCcCCEEeeCcCCCc
Confidence 35788888866432 23567888 9999999998765
No 77
>3a1q_C Ubiquitin interaction motif-containing protein 1; protein complex, cytoplasm, nucleus, phosphoprotein, UBL conjugation, transcription regulation; 2.20A {Mus musculus}
Probab=75.14 E-value=1.9 Score=25.06 Aligned_cols=17 Identities=53% Similarity=0.731 Sum_probs=11.7
Q ss_pred cchHHHHHHHHhcHHHH
Q psy509 135 KEEEELQLALALSQSEA 151 (158)
Q Consensus 135 ~eeedl~~aia~Sl~e~ 151 (158)
-|||.|.+|+.+|-.|+
T Consensus 5 tEEEq~ALA~rmSeQEA 21 (45)
T 3a1q_C 5 SEEEQFALALKMSEQEA 21 (45)
T ss_dssp CHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHhHHHH
Confidence 35777777777776655
No 78
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=75.14 E-value=1.6 Score=25.32 Aligned_cols=10 Identities=30% Similarity=0.989 Sum_probs=8.2
Q ss_pred CccccCcccc
Q psy509 31 TCHRCRTTFS 40 (158)
Q Consensus 31 ~C~~C~~~F~ 40 (158)
.|..|++.|.
T Consensus 4 ~C~~C~~~f~ 13 (60)
T 2adr_A 4 VCEVCTRAFA 13 (60)
T ss_dssp CCTTTCCCBS
T ss_pred cCCCCccccC
Confidence 5888998886
No 79
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=75.00 E-value=0.97 Score=28.38 Aligned_cols=47 Identities=23% Similarity=0.429 Sum_probs=31.8
Q ss_pred CCCccccCccccccccccccccccceecCCCCCCccccCCCCCCCceeeChhhHHH
Q psy509 29 GDTCHRCRTTFSLVQRKHHCRACGQVFCQLCSSKSTSLPKFGIEKEVRVCEDCHEK 84 (158)
Q Consensus 29 ~~~C~~C~~~F~~~~RkhhCr~CG~vfC~~Cs~~~~~lp~~~~~~~~RVC~~C~~~ 84 (158)
...|.+|...|..-. ....-.||++||..|...++.. ...|..|...
T Consensus 23 ~~~C~IC~~~~~~~~-~~~~l~C~H~fh~~Ci~~w~~~--------~~~CP~Cr~~ 69 (75)
T 1x4j_A 23 QTLCVVCMCDFESRQ-LLRVLPCNHEFHAKCVDKWLKA--------NRTCPICRAD 69 (75)
T ss_dssp CCEETTTTEECCBTC-EEEEETTTEEEETTHHHHHHHH--------CSSCTTTCCC
T ss_pred CCCCeECCcccCCCC-eEEEECCCCHhHHHHHHHHHHc--------CCcCcCcCCc
Confidence 457999998875432 2233459999999999877432 2467777543
No 80
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=74.99 E-value=0.86 Score=29.44 Aligned_cols=50 Identities=24% Similarity=0.445 Sum_probs=32.8
Q ss_pred cCCCccccCcccccc---------cc--ccccccccceecCCCCCCccccCCCCCCCceeeChhhHHHH
Q psy509 28 DGDTCHRCRTTFSLV---------QR--KHHCRACGQVFCQLCSSKSTSLPKFGIEKEVRVCEDCHEKF 85 (158)
Q Consensus 28 ~~~~C~~C~~~F~~~---------~R--khhCr~CG~vfC~~Cs~~~~~lp~~~~~~~~RVC~~C~~~l 85 (158)
+++.|.+|...|.-. .. ...-..||++|+..|...++.. ...|..|...+
T Consensus 14 ~~~~C~IC~~~~~~~C~iC~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~--------~~~CP~CR~~~ 74 (81)
T 2ecl_A 14 ECDTCAICRVQVMDACLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVKQ--------NNRCPLCQQDW 74 (81)
T ss_dssp CCSCBTTTTBCTTSCCTTHHHHTCTTTCCEEEETTSCEEEHHHHHHHTTT--------CCBCTTTCCBC
T ss_pred CCCCCcccChhhhccCcccccccCCCceEEEeCCCCCccChHHHHHHHHh--------CCCCCCcCCCc
Confidence 467899999988531 11 1122369999999998887432 24777776543
No 81
>2lcq_A Putative toxin VAPC6; PIN domain, Zn ribbon domain, ribosome biogenesis, metal BIN protein; NMR {Pyrococcus horikoshii}
Probab=74.38 E-value=1.1 Score=32.93 Aligned_cols=23 Identities=30% Similarity=0.745 Sum_probs=12.5
Q ss_pred CccccCccccccccccccccccc
Q psy509 31 TCHRCRTTFSLVQRKHHCRACGQ 53 (158)
Q Consensus 31 ~C~~C~~~F~~~~RkhhCr~CG~ 53 (158)
.|..|++.|..+.....|..||.
T Consensus 134 ~C~~Cg~~~~~~~~~~~Cp~CG~ 156 (165)
T 2lcq_A 134 VCIGCGRKFSTLPPGGVCPDCGS 156 (165)
T ss_dssp EESSSCCEESSCCGGGBCTTTCC
T ss_pred ECCCCCCcccCCCCCCcCCCCCC
Confidence 46666666654443445555554
No 82
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=74.19 E-value=0.57 Score=28.88 Aligned_cols=51 Identities=27% Similarity=0.628 Sum_probs=34.2
Q ss_pred cCCCccccCcccccc---ccccccccccceecCCCCCCccccCCCCCCCceeeChhhHHHHh
Q psy509 28 DGDTCHRCRTTFSLV---QRKHHCRACGQVFCQLCSSKSTSLPKFGIEKEVRVCEDCHEKFT 86 (158)
Q Consensus 28 ~~~~C~~C~~~F~~~---~RkhhCr~CG~vfC~~Cs~~~~~lp~~~~~~~~RVC~~C~~~l~ 86 (158)
+...|.+|...|.-- .+...-..||++||..|...+... ...|..|...+.
T Consensus 9 ~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~--------~~~CP~Cr~~~~ 62 (71)
T 3ng2_A 9 GTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKN--------ANTCPTCRKKIN 62 (71)
T ss_dssp TCCBCTTTCCBHHHHHTTTCCEEECTTSCEEEHHHHHHHHHH--------CSBCTTTCCBCC
T ss_pred CCCCCcccChhhhccccccCCeEeCCCCChHhHHHHHHHHHc--------CCCCCCCCCccC
Confidence 356899999887542 223355689999999999876421 246777765443
No 83
>1rmd_A RAG1; V(D)J recombination, antibody, MAD, ring finger, zinc binuclear cluster, zinc finger, DNA-binding protein; 2.10A {Mus musculus} SCOP: g.37.1.1 g.44.1.1
Probab=73.88 E-value=0.52 Score=32.32 Aligned_cols=48 Identities=17% Similarity=0.518 Sum_probs=31.6
Q ss_pred cCCCccccCccccccccccccccccceecCCCCCCccccCCCCCCCceeeChhhHHHHh
Q psy509 28 DGDTCHRCRTTFSLVQRKHHCRACGQVFCQLCSSKSTSLPKFGIEKEVRVCEDCHEKFT 86 (158)
Q Consensus 28 ~~~~C~~C~~~F~~~~RkhhCr~CG~vfC~~Cs~~~~~lp~~~~~~~~RVC~~C~~~l~ 86 (158)
+...|.+|...|.--.. -.||++||..|...+.... ...|..|...+.
T Consensus 22 ~~~~C~IC~~~~~~p~~----~~CgH~fC~~Ci~~~~~~~-------~~~CP~Cr~~~~ 69 (116)
T 1rmd_A 22 KSISCQICEHILADPVE----TSCKHLFCRICILRCLKVM-------GSYCPSCRYPCF 69 (116)
T ss_dssp HHTBCTTTCSBCSSEEE----CTTSCEEEHHHHHHHHHHT-------CSBCTTTCCBCC
T ss_pred CCCCCCCCCcHhcCcEE----cCCCCcccHHHHHHHHhHC-------cCcCCCCCCCCC
Confidence 35689999887753211 3799999999987654321 245777765543
No 84
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=73.65 E-value=0.64 Score=27.89 Aligned_cols=49 Identities=29% Similarity=0.634 Sum_probs=32.2
Q ss_pred CCCccccCcccccc---ccccccccccceecCCCCCCccccCCCCCCCceeeChhhHHHH
Q psy509 29 GDTCHRCRTTFSLV---QRKHHCRACGQVFCQLCSSKSTSLPKFGIEKEVRVCEDCHEKF 85 (158)
Q Consensus 29 ~~~C~~C~~~F~~~---~RkhhCr~CG~vfC~~Cs~~~~~lp~~~~~~~~RVC~~C~~~l 85 (158)
...|.+|...|.-- .+...-..||++||..|...+... ...|..|...+
T Consensus 3 ~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~--------~~~CP~Cr~~~ 54 (64)
T 2xeu_A 3 MVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKN--------ANTCPTCRKKI 54 (64)
T ss_dssp CCBCTTTCCBHHHHHHTTCCEEEETTSCEEEHHHHHHHHHH--------CSBCTTTCCBC
T ss_pred CCCCCccChhhhCccccCCCEEeCCCCCchhHHHHHHHHHc--------CCCCCCCCccC
Confidence 35799998877542 223345689999999998776421 23666665543
No 85
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=73.58 E-value=0.82 Score=29.95 Aligned_cols=11 Identities=18% Similarity=0.585 Sum_probs=9.5
Q ss_pred CCccccCcccc
Q psy509 30 DTCHRCRTTFS 40 (158)
Q Consensus 30 ~~C~~C~~~F~ 40 (158)
-.|..|++.|.
T Consensus 25 ~~C~~C~k~f~ 35 (98)
T 2gqj_A 25 AVCPTCNVVTR 35 (98)
T ss_dssp CCCTTTCCCCS
T ss_pred cCCCCCCCChh
Confidence 47999999997
No 86
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=72.87 E-value=1.2 Score=27.41 Aligned_cols=50 Identities=16% Similarity=0.382 Sum_probs=32.9
Q ss_pred CCCccccCccccccccccccccccceecCCCCCCccccCCCCCCCceeeChhhHHHHhc
Q psy509 29 GDTCHRCRTTFSLVQRKHHCRACGQVFCQLCSSKSTSLPKFGIEKEVRVCEDCHEKFTN 87 (158)
Q Consensus 29 ~~~C~~C~~~F~~~~RkhhCr~CG~vfC~~Cs~~~~~lp~~~~~~~~RVC~~C~~~l~~ 87 (158)
...|.+|...|..-. ....-.||++||..|...++.. ...|..|...+..
T Consensus 14 ~~~C~IC~~~~~~~~-~~~~~~C~H~fc~~Ci~~~~~~--------~~~CP~Cr~~~~~ 63 (69)
T 2kiz_A 14 EEKCTICLSILEEGE-DVRRLPCMHLFHQVCVDQWLIT--------NKKCPICRVDIEA 63 (69)
T ss_dssp CCSBTTTTBCCCSSS-CEEECTTSCEEEHHHHHHHHHH--------CSBCTTTCSBSCS
T ss_pred CCCCeeCCccccCCC-cEEEeCCCCHHHHHHHHHHHHc--------CCCCcCcCccccC
Confidence 458999988774221 2233469999999998876432 2358888665543
No 87
>1p9c_A 26S proteasome non-ATPase regulatory subunit 4; alpha helix, hairpin loop, ligand binding protein; NMR {Homo sapiens} SCOP: j.105.1.1 PDB: 1p9d_S 1uel_B
Probab=71.50 E-value=2 Score=25.40 Aligned_cols=23 Identities=30% Similarity=0.427 Sum_probs=17.5
Q ss_pred chhhhcchHHHHHHHHhcHHHHh
Q psy509 130 TEEELKEEEELQLALALSQSEAE 152 (158)
Q Consensus 130 ~~~~~~eeedl~~aia~Sl~e~e 152 (158)
......|||.|+.||++|+.+.+
T Consensus 15 d~~~mteeeqla~ALqMSmq~~~ 37 (45)
T 1p9c_A 15 DLSSMTEEEQIAYAMQMSLQGAE 37 (45)
T ss_dssp SHHHHHHHHHHHHHHHHHTSSSS
T ss_pred chhccCchHHHHHHHHhcccccc
Confidence 33456778889999999998653
No 88
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=71.31 E-value=1.4 Score=28.68 Aligned_cols=48 Identities=21% Similarity=0.596 Sum_probs=30.1
Q ss_pred cCCCccccCccccccccccccccccceecCCCCCCccccCCCCCCCceeeChhhHHH
Q psy509 28 DGDTCHRCRTTFSLVQRKHHCRACGQVFCQLCSSKSTSLPKFGIEKEVRVCEDCHEK 84 (158)
Q Consensus 28 ~~~~C~~C~~~F~~~~RkhhCr~CG~vfC~~Cs~~~~~lp~~~~~~~~RVC~~C~~~ 84 (158)
+.-.|.+|...|. .-..-..||+.||..|...+..- .....|..|...
T Consensus 12 ~~~~C~IC~~~~~---~p~~~~~CgH~fC~~Ci~~~~~~------~~~~~CP~Cr~~ 59 (92)
T 3ztg_A 12 DELLCLICKDIMT---DAVVIPCCGNSYCDECIRTALLE------SDEHTCPTCHQN 59 (92)
T ss_dssp TTTEETTTTEECS---SCEECTTTCCEECHHHHHHHHHH------CTTCCCTTTCCS
T ss_pred cCCCCCCCChhhc---CceECCCCCCHHHHHHHHHHHHh------cCCCcCcCCCCc
Confidence 3457999988764 22223349999999998765321 112467777644
No 89
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=71.07 E-value=0.95 Score=30.58 Aligned_cols=47 Identities=19% Similarity=0.436 Sum_probs=32.0
Q ss_pred CCCccccCccccccccccccccccceecCCCCCCccccCCCCCCCceeeChhhHHHHh
Q psy509 29 GDTCHRCRTTFSLVQRKHHCRACGQVFCQLCSSKSTSLPKFGIEKEVRVCEDCHEKFT 86 (158)
Q Consensus 29 ~~~C~~C~~~F~~~~RkhhCr~CG~vfC~~Cs~~~~~lp~~~~~~~~RVC~~C~~~l~ 86 (158)
...|.+|...|. .......||++||..|...+... ...|..|...+.
T Consensus 15 ~~~C~IC~~~~~---~p~~~~~CgH~fC~~Ci~~~~~~--------~~~CP~Cr~~~~ 61 (108)
T 2ckl_A 15 HLMCVLCGGYFI---DATTIIECLHSFCKTCIVRYLET--------SKYCPICDVQVH 61 (108)
T ss_dssp GTBCTTTSSBCS---SEEEETTTCCEEEHHHHHHHHTS--------CSBCTTTCCBSC
T ss_pred cCCCccCChHHh---CcCEeCCCCChhhHHHHHHHHHh--------CCcCcCCCcccc
Confidence 457999987764 23333489999999998776421 256877765543
No 90
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=70.84 E-value=1.9 Score=27.43 Aligned_cols=45 Identities=22% Similarity=0.514 Sum_probs=29.9
Q ss_pred CCCccccCccccccccccccccccceecCCCCCCccccCCCCCCCceeeChhhHHHH
Q psy509 29 GDTCHRCRTTFSLVQRKHHCRACGQVFCQLCSSKSTSLPKFGIEKEVRVCEDCHEKF 85 (158)
Q Consensus 29 ~~~C~~C~~~F~~~~RkhhCr~CG~vfC~~Cs~~~~~lp~~~~~~~~RVC~~C~~~l 85 (158)
...|.+|...|.--. -..||++||..|...+... ...|..|...+
T Consensus 15 ~~~C~IC~~~~~~p~----~~~CgH~fC~~Ci~~~~~~--------~~~CP~Cr~~~ 59 (81)
T 2csy_A 15 PFRCFICRQAFQNPV----VTKCRHYFCESCALEHFRA--------TPRCYICDQPT 59 (81)
T ss_dssp CSBCSSSCSBCCSEE----ECTTSCEEEHHHHHHHHHH--------CSBCSSSCCBC
T ss_pred CCCCcCCCchhcCee----EccCCCHhHHHHHHHHHHC--------CCcCCCcCccc
Confidence 357999988774321 2479999999998776421 34566665443
No 91
>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82
Probab=69.11 E-value=2.2 Score=29.73 Aligned_cols=14 Identities=36% Similarity=0.833 Sum_probs=7.1
Q ss_pred cCCCCCCccccCCC
Q psy509 56 CQLCSSKSTSLPKF 69 (158)
Q Consensus 56 C~~Cs~~~~~lp~~ 69 (158)
|-.|-+.++..|.|
T Consensus 87 CP~CkSe~Ie~P~F 100 (105)
T 2gmg_A 87 CPKCKSEWIEEPRF 100 (105)
T ss_dssp CSSSCCCCBCCCCE
T ss_pred CcCCCCCccCCcce
Confidence 44444555555554
No 92
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=68.99 E-value=2.2 Score=25.63 Aligned_cols=11 Identities=27% Similarity=0.812 Sum_probs=8.7
Q ss_pred CCccccCcccc
Q psy509 30 DTCHRCRTTFS 40 (158)
Q Consensus 30 ~~C~~C~~~F~ 40 (158)
-.|..|++.|.
T Consensus 10 ~~C~~C~k~f~ 20 (70)
T 1x5w_A 10 EKCSECSYSCS 20 (70)
T ss_dssp EECSSSSCEES
T ss_pred eECCCCCcccC
Confidence 36888998886
No 93
>1wig_A KIAA1808 protein; LIM domain, zinc finger, metal-binding protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=68.98 E-value=7.6 Score=24.16 Aligned_cols=15 Identities=7% Similarity=0.056 Sum_probs=10.8
Q ss_pred CceeeChhhHHHHhc
Q psy509 73 KEVRVCEDCHEKFTN 87 (158)
Q Consensus 73 ~~~RVC~~C~~~l~~ 87 (158)
...-.|..||..+..
T Consensus 51 ~~~~yC~~C~~~~~~ 65 (73)
T 1wig_A 51 GSSIWHPACRQAART 65 (73)
T ss_dssp TTEEECTTHHHHTSS
T ss_pred CCEEEChHHChHhhc
Confidence 345689999987654
No 94
>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X
Probab=68.43 E-value=2.3 Score=25.40 Aligned_cols=24 Identities=29% Similarity=0.636 Sum_probs=17.4
Q ss_pred CccccCcccccc----ccccccccccce
Q psy509 31 TCHRCRTTFSLV----QRKHHCRACGQV 54 (158)
Q Consensus 31 ~C~~C~~~F~~~----~RkhhCr~CG~v 54 (158)
.|..|++.|+.- .--.+|..||.-
T Consensus 5 ~C~rCg~~fs~~el~~lP~IrCpyCGyr 32 (48)
T 4ayb_P 5 RCGKCWKTFTDEQLKVLPGVRCPYCGYK 32 (48)
T ss_dssp CCCCTTTTCCCCCSCCCSSSCCTTTCCS
T ss_pred EeeccCCCccHHHHhhCCCcccCccCcE
Confidence 589999999842 335678888863
No 95
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=67.81 E-value=1.2 Score=28.12 Aligned_cols=46 Identities=13% Similarity=0.095 Sum_probs=30.0
Q ss_pred CCCccccCccccccccccccccccceecCCCCCCccccCCCCCCCceeeChhhHHHH
Q psy509 29 GDTCHRCRTTFSLVQRKHHCRACGQVFCQLCSSKSTSLPKFGIEKEVRVCEDCHEKF 85 (158)
Q Consensus 29 ~~~C~~C~~~F~~~~RkhhCr~CG~vfC~~Cs~~~~~lp~~~~~~~~RVC~~C~~~l 85 (158)
.-.|.+|...|.-- .--.||++||..|...+... ....|..|...+
T Consensus 8 ~~~C~IC~~~~~~P----v~~~CgH~fc~~Ci~~~~~~-------~~~~CP~C~~~~ 53 (78)
T 1t1h_A 8 YFRCPISLELMKDP----VIVSTGQTYERSSIQKWLDA-------GHKTCPKSQETL 53 (78)
T ss_dssp SSSCTTTSCCCSSE----EEETTTEEEEHHHHHHHHTT-------TCCBCTTTCCBC
T ss_pred cCCCCCccccccCC----EEcCCCCeecHHHHHHHHHH-------CcCCCCCCcCCC
Confidence 45799998877521 12379999999998776421 135676665543
No 96
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=67.60 E-value=2.4 Score=25.67 Aligned_cols=11 Identities=36% Similarity=0.800 Sum_probs=8.9
Q ss_pred CCccccCcccc
Q psy509 30 DTCHRCRTTFS 40 (158)
Q Consensus 30 ~~C~~C~~~F~ 40 (158)
-.|..|++.|.
T Consensus 15 ~~C~~C~k~f~ 25 (72)
T 1x6e_A 15 YGCVECGKAFS 25 (72)
T ss_dssp EECSSSCCEES
T ss_pred ccCCCCCCccC
Confidence 36889999886
No 97
>3j20_Y 30S ribosomal protein S27AE; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=67.10 E-value=2.2 Score=25.58 Aligned_cols=26 Identities=27% Similarity=0.576 Sum_probs=16.0
Q ss_pred CCccccCcc-cc-cccccccccccccee
Q psy509 30 DTCHRCRTT-FS-LVQRKHHCRACGQVF 55 (158)
Q Consensus 30 ~~C~~C~~~-F~-~~~RkhhCr~CG~vf 55 (158)
..|..|+.. |- .-..+++|..||.++
T Consensus 20 k~CP~CG~~~fm~~~~~R~~C~kCG~t~ 47 (50)
T 3j20_Y 20 KFCPRCGPGVFMADHGDRWACGKCGYTE 47 (50)
T ss_dssp EECSSSCSSCEEEECSSEEECSSSCCEE
T ss_pred ccCCCCCCceEEecCCCeEECCCCCCEE
Confidence 468888763 21 123467888888764
No 98
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=67.03 E-value=3 Score=25.47 Aligned_cols=11 Identities=36% Similarity=0.936 Sum_probs=9.5
Q ss_pred CCccccCcccc
Q psy509 30 DTCHRCRTTFS 40 (158)
Q Consensus 30 ~~C~~C~~~F~ 40 (158)
-.|..|++.|.
T Consensus 19 ~~C~~C~~~f~ 29 (77)
T 2cot_A 19 YKCDECGKSFS 29 (77)
T ss_dssp SBCSSSCCBCS
T ss_pred EECCCCCcccC
Confidence 47999999996
No 99
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=66.08 E-value=2.6 Score=24.15 Aligned_cols=11 Identities=36% Similarity=0.842 Sum_probs=8.8
Q ss_pred CCccccCcccc
Q psy509 30 DTCHRCRTTFS 40 (158)
Q Consensus 30 ~~C~~C~~~F~ 40 (158)
-.|..|++.|.
T Consensus 13 ~~C~~C~k~f~ 23 (54)
T 2eps_A 13 YICQSCGKGFS 23 (54)
T ss_dssp EECSSSCCEES
T ss_pred eECCCCCcccC
Confidence 36888999885
No 100
>2ea5_A Cell growth regulator with ring finger domain protein 1; CGRRF1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=66.03 E-value=2 Score=26.89 Aligned_cols=46 Identities=15% Similarity=0.438 Sum_probs=30.9
Q ss_pred ccCCCccccCccccccccccccccccce-ecCCCCCCccccCCCCCCCceeeChhhHHHHhcc
Q psy509 27 MDGDTCHRCRTTFSLVQRKHHCRACGQV-FCQLCSSKSTSLPKFGIEKEVRVCEDCHEKFTNY 88 (158)
Q Consensus 27 ~~~~~C~~C~~~F~~~~RkhhCr~CG~v-fC~~Cs~~~~~lp~~~~~~~~RVC~~C~~~l~~~ 88 (158)
.+...|.+|...+. ..---.||++ ||..|... .+.|..|...+...
T Consensus 13 ~~~~~C~IC~~~~~----~~v~~pCgH~~~C~~C~~~------------~~~CP~CR~~i~~~ 59 (68)
T 2ea5_A 13 ENSKDCVVCQNGTV----NWVLLPCRHTCLCDGCVKY------------FQQCPMCRQFVQES 59 (68)
T ss_dssp CCSSCCSSSSSSCC----CCEETTTTBCCSCTTHHHH------------CSSCTTTCCCCCCE
T ss_pred CCCCCCCCcCcCCC----CEEEECCCChhhhHHHHhc------------CCCCCCCCcchhce
Confidence 34678999987653 2233579999 99999762 25677776665543
No 101
>3hct_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 3hcu_A 2eci_A 2jmd_A
Probab=65.24 E-value=2.1 Score=29.40 Aligned_cols=33 Identities=27% Similarity=0.617 Sum_probs=23.8
Q ss_pred cCCCccccCccccccccccccccccceecCCCCCCcc
Q psy509 28 DGDTCHRCRTTFSLVQRKHHCRACGQVFCQLCSSKST 64 (158)
Q Consensus 28 ~~~~C~~C~~~F~~~~RkhhCr~CG~vfC~~Cs~~~~ 64 (158)
+.-.|.+|...|.-- .. -.||++||..|...+.
T Consensus 17 ~~~~C~IC~~~~~~p---~~-~~CgH~fC~~Ci~~~~ 49 (118)
T 3hct_A 17 SKYECPICLMALREA---VQ-TPCGHRFCKACIIKSI 49 (118)
T ss_dssp GGGBCTTTCSBCSSE---EE-CTTSCEEEHHHHHHHH
T ss_pred CCCCCCcCChhhcCe---EE-CCcCChhhHHHHHHHH
Confidence 345899999877532 12 2699999999987653
No 102
>2fc7_A ZZZ3 protein; structure genomics, ZZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.6
Probab=64.84 E-value=4.4 Score=26.65 Aligned_cols=38 Identities=26% Similarity=0.550 Sum_probs=27.3
Q ss_pred CCcccCCCccccCccccccccccccccccc----eecCCCCCC
Q psy509 24 PEWMDGDTCHRCRTTFSLVQRKHHCRACGQ----VFCQLCSSK 62 (158)
Q Consensus 24 p~W~~~~~C~~C~~~F~~~~RkhhCr~CG~----vfC~~Cs~~ 62 (158)
..|-..-.|-.|++ ..+..+|++|..|.. -+|..|-..
T Consensus 16 ~~~H~~~~Cd~C~~-~pI~G~RykC~~C~d~~~yDLC~~C~~~ 57 (82)
T 2fc7_A 16 FVQHVGFKCDNCGI-EPIQGVRWHCQDCPPEMSLDFCDSCSDC 57 (82)
T ss_dssp SCEESSCCCSSSCC-SSEESCEEEESSSCSSSCCEEEGGGTTC
T ss_pred CCeeCcCCCCCCCC-CcceeceEECCcCCCCcceecHHHHHhC
Confidence 33444568999986 345668999999975 588888654
No 103
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=64.55 E-value=2.6 Score=25.81 Aligned_cols=10 Identities=30% Similarity=0.644 Sum_probs=8.5
Q ss_pred CccccCcccc
Q psy509 31 TCHRCRTTFS 40 (158)
Q Consensus 31 ~C~~C~~~F~ 40 (158)
.|..|++.|.
T Consensus 9 ~C~~C~k~f~ 18 (78)
T 2d9h_A 9 QCEICGFTCR 18 (78)
T ss_dssp ECSSSCCEES
T ss_pred ECCCCCCeeC
Confidence 6889999886
No 104
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=64.38 E-value=1.6 Score=30.76 Aligned_cols=49 Identities=22% Similarity=0.413 Sum_probs=1.0
Q ss_pred cCCCccccCcccccccc----------cccc----ccccceecCCCCCCccccCCCCCCCceeeChhhHHH
Q psy509 28 DGDTCHRCRTTFSLVQR----------KHHC----RACGQVFCQLCSSKSTSLPKFGIEKEVRVCEDCHEK 84 (158)
Q Consensus 28 ~~~~C~~C~~~F~~~~R----------khhC----r~CG~vfC~~Cs~~~~~lp~~~~~~~~RVC~~C~~~ 84 (158)
+.+.|.+|...|....- ...| ..||++|+..|...++.. ..+|..|...
T Consensus 47 ~~d~CaICl~~~~~~c~~C~~~~~~~~~~~~~v~~~~C~H~FH~~CI~~Wl~~--------~~~CP~Cr~~ 109 (117)
T 4a0k_B 47 VVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKT--------RQVCPLDNRE 109 (117)
T ss_dssp CC---------------------------------------------------------------------
T ss_pred CCCcCeECChhhcCcChhhhcccccccccccccccCCcCceEcHHHHHHHHHc--------CCcCCCCCCe
Confidence 35799999998853110 1112 269999999999887432 3578888665
No 105
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=63.31 E-value=3.4 Score=26.63 Aligned_cols=52 Identities=21% Similarity=0.665 Sum_probs=33.8
Q ss_pred cCCCccccCccccccccc-cccccccceecCCCCCCccccCCCCCCCceeeChhhHHHHhc
Q psy509 28 DGDTCHRCRTTFSLVQRK-HHCRACGQVFCQLCSSKSTSLPKFGIEKEVRVCEDCHEKFTN 87 (158)
Q Consensus 28 ~~~~C~~C~~~F~~~~Rk-hhCr~CG~vfC~~Cs~~~~~lp~~~~~~~~RVC~~C~~~l~~ 87 (158)
+...|.+|-..|+.-..+ ..| .||+.||..|...... .....|-.|...+..
T Consensus 10 ~~~~CpICle~~~~~d~~~~p~-~CGH~fC~~Cl~~~~~-------~~~~~CP~CR~~~~~ 62 (78)
T 1e4u_A 10 DPVECPLCMEPLEIDDINFFPC-TCGYQICRFCWHRIRT-------DENGLCPACRKPYPE 62 (78)
T ss_dssp CCCBCTTTCCBCCTTTTTCCSS-TTSCCCCHHHHHHHTT-------SSCSBCTTTCCBCSS
T ss_pred cCCcCCccCccCcccccccccc-CCCCCcCHHHHHHHHh-------cCCCCCCCCCCccCC
Confidence 456899999988643222 223 6999999999765321 123578888776543
No 106
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=62.85 E-value=2.4 Score=27.93 Aligned_cols=10 Identities=20% Similarity=0.674 Sum_probs=8.9
Q ss_pred CccccCccc-c
Q psy509 31 TCHRCRTTF-S 40 (158)
Q Consensus 31 ~C~~C~~~F-~ 40 (158)
.|..|++.| .
T Consensus 36 ~C~~C~k~F~~ 46 (96)
T 2ctd_A 36 SCPTCQAVGRK 46 (96)
T ss_dssp ECTTTCSCEES
T ss_pred CCCCCCCCccc
Confidence 799999999 5
No 107
>3knv_A TNF receptor-associated factor 2; cross-brace, alternative splicing, apoptosis, cytoplasm, metal-binding, UBL conjugation, zinc, zinc-finger; 1.90A {Homo sapiens}
Probab=62.46 E-value=1.3 Score=31.76 Aligned_cols=45 Identities=22% Similarity=0.601 Sum_probs=32.2
Q ss_pred CCccccCccccccccccccccccceecCCCCCCccccCCCCCCCceeeChhhHHHH
Q psy509 30 DTCHRCRTTFSLVQRKHHCRACGQVFCQLCSSKSTSLPKFGIEKEVRVCEDCHEKF 85 (158)
Q Consensus 30 ~~C~~C~~~F~~~~RkhhCr~CG~vfC~~Cs~~~~~lp~~~~~~~~RVC~~C~~~l 85 (158)
-.|.+|...|.-- .. -.||++||..|...+.. .....|..|...+
T Consensus 32 ~~C~IC~~~~~~p---v~-~~CgH~FC~~Ci~~~~~-------~~~~~CP~Cr~~~ 76 (141)
T 3knv_A 32 YLCSACRNVLRRP---FQ-AQCGHRYCSFCLASILS-------SGPQNCAACVHEG 76 (141)
T ss_dssp GBCTTTCSBCSSE---EE-CTTSCEEEHHHHHHHGG-------GSCEECHHHHHTT
T ss_pred cCCCCCChhhcCc---EE-CCCCCccCHHHHHHHHh-------cCCCCCCCCCCcc
Confidence 4799998876422 12 38999999999887642 2235899998765
No 108
>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=61.08 E-value=1.5 Score=26.18 Aligned_cols=25 Identities=20% Similarity=0.639 Sum_probs=15.2
Q ss_pred CccccCccccc---c--cccccccccccee
Q psy509 31 TCHRCRTTFSL---V--QRKHHCRACGQVF 55 (158)
Q Consensus 31 ~C~~C~~~F~~---~--~RkhhCr~CG~vf 55 (158)
.|..|++.|.. + .+.+.|..||..|
T Consensus 20 ~C~~C~k~f~~~~~l~~~~~~~C~~C~~~f 49 (73)
T 2ctu_A 20 KCSKCGIIFIRRSTLSRRKTPMCEKCRKDS 49 (73)
T ss_dssp ECSSSCCEEECCCCCCCSSSCCCHHHHHTC
T ss_pred eCCcccchhCCHHHhCcCCCCCCCCCChhh
Confidence 57777777742 1 4456666666655
No 109
>2jne_A Hypothetical protein YFGJ; zinc fingers, two zinc, structural genomics, PSI-2, protein structure initiative; NMR {Escherichia coli} SCOP: g.41.18.1
Probab=60.96 E-value=3.5 Score=28.37 Aligned_cols=33 Identities=24% Similarity=0.766 Sum_probs=25.4
Q ss_pred CCccccCccccccccccccccccce-----ecCCCCCC
Q psy509 30 DTCHRCRTTFSLVQRKHHCRACGQV-----FCQLCSSK 62 (158)
Q Consensus 30 ~~C~~C~~~F~~~~RkhhCr~CG~v-----fC~~Cs~~ 62 (158)
..|..|+....+-...+||..|+.- +|..|-..
T Consensus 33 ~~CP~Cq~eL~~~g~~~hC~~C~~~f~~~a~CPdC~q~ 70 (101)
T 2jne_A 33 LHCPQCQHVLDQDNGHARCRSCGEFIEMKALCPDCHQP 70 (101)
T ss_dssp CBCSSSCSBEEEETTEEEETTTCCEEEEEEECTTTCSB
T ss_pred ccCccCCCcceecCCEEECccccchhhccccCcchhhH
Confidence 5799999988887788889998875 56666543
No 110
>1z6u_A NP95-like ring finger protein isoform B; structural genomics consortium, ligase, ubiquitin-protein ligase, cell cycle regulation, SGC; 2.10A {Homo sapiens}
Probab=59.54 E-value=2.2 Score=30.90 Aligned_cols=46 Identities=20% Similarity=0.420 Sum_probs=30.8
Q ss_pred CCccccCccccccccccccccccceecCCCCCCccccCCCCCCCceeeChhhHHHHh
Q psy509 30 DTCHRCRTTFSLVQRKHHCRACGQVFCQLCSSKSTSLPKFGIEKEVRVCEDCHEKFT 86 (158)
Q Consensus 30 ~~C~~C~~~F~~~~RkhhCr~CG~vfC~~Cs~~~~~lp~~~~~~~~RVC~~C~~~l~ 86 (158)
..|.+|...|.--.. -.||++||..|...+... ....|..|...+.
T Consensus 79 ~~C~IC~~~~~~pv~----~~CgH~fC~~Ci~~~~~~-------~~~~CP~Cr~~~~ 124 (150)
T 1z6u_A 79 FMCVCCQELVYQPVT----TECFHNVCKDCLQRSFKA-------QVFSCPACRHDLG 124 (150)
T ss_dssp TBCTTTSSBCSSEEE----CTTSCEEEHHHHHHHHHT-------TCCBCTTTCCBCC
T ss_pred CEeecCChhhcCCEE----cCCCCchhHHHHHHHHHh-------CCCcCCCCCccCC
Confidence 479999887752211 489999999998776431 2346777765544
No 111
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=58.02 E-value=4.5 Score=24.63 Aligned_cols=11 Identities=27% Similarity=0.757 Sum_probs=8.8
Q ss_pred CCccccCcccc
Q psy509 30 DTCHRCRTTFS 40 (158)
Q Consensus 30 ~~C~~C~~~F~ 40 (158)
-.|..|++.|.
T Consensus 16 ~~C~~C~k~f~ 26 (77)
T 2ct1_A 16 YECYICHARFT 26 (77)
T ss_dssp EECTTTCCEES
T ss_pred eECCCcCchhC
Confidence 36888999886
No 112
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=57.52 E-value=4.4 Score=25.50 Aligned_cols=25 Identities=24% Similarity=0.626 Sum_probs=16.6
Q ss_pred CccccCcccccc------------cccccccccccee
Q psy509 31 TCHRCRTTFSLV------------QRKHHCRACGQVF 55 (158)
Q Consensus 31 ~C~~C~~~F~~~------------~RkhhCr~CG~vf 55 (158)
.|..|++.|... .+.+.|..||..|
T Consensus 10 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f 46 (96)
T 2dmd_A 10 KCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAA 46 (96)
T ss_dssp CBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEE
T ss_pred ECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCcc
Confidence 688999988621 2335577777766
No 113
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=57.00 E-value=2 Score=29.36 Aligned_cols=49 Identities=29% Similarity=0.676 Sum_probs=30.3
Q ss_pred CCCccccCcccccc---ccccccccccceecCCCCCCccccCCCCCCCceeeChhhHHHH
Q psy509 29 GDTCHRCRTTFSLV---QRKHHCRACGQVFCQLCSSKSTSLPKFGIEKEVRVCEDCHEKF 85 (158)
Q Consensus 29 ~~~C~~C~~~F~~~---~RkhhCr~CG~vfC~~Cs~~~~~lp~~~~~~~~RVC~~C~~~l 85 (158)
...|.+|...|.-. .+....-.||++||..|...+.. ....|..|...+
T Consensus 72 ~~~C~iC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~--------~~~~CP~Cr~~~ 123 (133)
T 4ap4_A 72 TVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLK--------NANTCPTCRKKI 123 (133)
T ss_dssp SCBCTTTCCBHHHHHHTTCCEEEETTSBEEEHHHHHHHHH--------HCSBCTTTCCBC
T ss_pred CCCCCCCCCccccccccCcceEeCCCCChhhHHHHHHHHH--------cCCCCCCCCCcC
Confidence 35688887776532 22234557999999999876632 224666665443
No 114
>1vq8_Z 50S ribosomal protein L37AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1vq4_Z* 1vq6_Z* 1vq5_Z* 1vq7_Z* 1vq9_Z* 1vqk_Z* 1vql_Z* 1vqm_Z* 1vqn_Z* 1vqo_Z* 1vqp_Z* 1yhq_Z* 1yi2_Z* 1yij_Z* 1yit_Z* 1yj9_Z* 1yjn_Z* 1yjw_Z* 2qa4_Z* 1s72_Z* ...
Probab=56.78 E-value=3.6 Score=27.27 Aligned_cols=29 Identities=17% Similarity=0.326 Sum_probs=18.4
Q ss_pred CCccccCcc--ccccccccccccccceecCC
Q psy509 30 DTCHRCRTT--FSLVQRKHHCRACGQVFCQL 58 (158)
Q Consensus 30 ~~C~~C~~~--F~~~~RkhhCr~CG~vfC~~ 58 (158)
..|..|++. |..-....+|..||..|-+.
T Consensus 28 y~Cp~CG~~~v~r~atGiW~C~~Cg~~~agg 58 (83)
T 1vq8_Z 28 HACPNCGEDRVDRQGTGIWQCSYCDYKFTGG 58 (83)
T ss_dssp EECSSSCCEEEEEEETTEEEETTTCCEEECC
T ss_pred CcCCCCCCcceeccCCCeEECCCCCCEecCC
Confidence 368888762 22334567788888877554
No 115
>2y1n_A E3 ubiquitin-protein ligase; ligase-transferase complex, ubiquitin ring E3 ligase; HET: PTR; 2.00A {Homo sapiens} PDB: 2y1m_A* 4a4c_A* 4a4b_A* 1fbv_A* 3vgo_A 4a49_A* 2k4d_A 2ldr_A*
Probab=56.58 E-value=1.1 Score=37.96 Aligned_cols=47 Identities=19% Similarity=0.510 Sum_probs=32.9
Q ss_pred CCccccCccccccccccccccccceecCCCCCCccccCCCCCCCceeeChhhHHHHhc
Q psy509 30 DTCHRCRTTFSLVQRKHHCRACGQVFCQLCSSKSTSLPKFGIEKEVRVCEDCHEKFTN 87 (158)
Q Consensus 30 ~~C~~C~~~F~~~~RkhhCr~CG~vfC~~Cs~~~~~lp~~~~~~~~RVC~~C~~~l~~ 87 (158)
..|.+|...|. ....-.||++||..|...+.. ...+.|..|...+..
T Consensus 333 ~~C~ICle~~~----~pv~lpCGH~FC~~Ci~~wl~-------~~~~~CP~CR~~i~~ 379 (389)
T 2y1n_A 333 QLCKICAENDK----DVKIEPCGHLMCTSCLTSWQE-------SEGQGCPFCRCEIKG 379 (389)
T ss_dssp SBCTTTSSSBC----CEEEETTCCEECHHHHHHHHH-------HTCSBCTTTCCBCCE
T ss_pred CCCCccCcCCC----CeEEeCCCChhhHHHHHHHHh-------cCCCCCCCCCCccCC
Confidence 58999987763 334568999999999876532 124578888765544
No 116
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=56.57 E-value=4.2 Score=25.50 Aligned_cols=25 Identities=32% Similarity=0.890 Sum_probs=16.8
Q ss_pred CccccCccccc---c---------cccccccccccee
Q psy509 31 TCHRCRTTFSL---V---------QRKHHCRACGQVF 55 (158)
Q Consensus 31 ~C~~C~~~F~~---~---------~RkhhCr~CG~vf 55 (158)
.|..|++.|.. + .+.+.|..||..|
T Consensus 5 ~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f 41 (88)
T 1llm_C 5 QCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKF 41 (88)
T ss_dssp ECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEE
T ss_pred cCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCcc
Confidence 58889998862 1 2345677777766
No 117
>2kdx_A HYPA, hydrogenase/urease nickel incorporation protein HYPA; metallochaperone, metal-binding, metal- binding protein; NMR {Helicobacter pylori}
Probab=56.18 E-value=4.3 Score=28.21 Aligned_cols=23 Identities=22% Similarity=0.595 Sum_probs=12.6
Q ss_pred CccccCcccccccccc-ccccccc
Q psy509 31 TCHRCRTTFSLVQRKH-HCRACGQ 53 (158)
Q Consensus 31 ~C~~C~~~F~~~~Rkh-hCr~CG~ 53 (158)
.|..|+..|....... .|..||.
T Consensus 75 ~C~~CG~~~e~~~~~~~~CP~Cgs 98 (119)
T 2kdx_A 75 ECKDCSHVFKPNALDYGVCEKCHS 98 (119)
T ss_dssp ECSSSSCEECSCCSTTCCCSSSSS
T ss_pred EcCCCCCEEeCCCCCCCcCccccC
Confidence 4666666666544444 4555544
No 118
>1yx4_A 26S proteasome non-ATPase regulatory subunit 4; polyubiquitin, UIM, hydrolase; NMR {Homo sapiens} PDB: 1yx5_A 1yx6_A 2kde_A 2kdf_A
Probab=55.71 E-value=2.5 Score=30.58 Aligned_cols=20 Identities=35% Similarity=0.534 Sum_probs=16.5
Q ss_pred hhcchHHHHHHHHhcHHHHh
Q psy509 133 ELKEEEELQLALALSQSEAE 152 (158)
Q Consensus 133 ~~~eeedl~~aia~Sl~e~e 152 (158)
...|||.|+.||++|+.+.+
T Consensus 106 ~MtEEeqLa~ALqMSMQe~~ 125 (132)
T 1yx4_A 106 SMTEEEQIAYAMQMSLQGAE 125 (132)
T ss_dssp TSCHHHHHHHHHHHSSSSCS
T ss_pred hCChHHHHHHHHHhcccccc
Confidence 45678899999999998754
No 119
>1wfe_A Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=55.06 E-value=4.7 Score=26.90 Aligned_cols=28 Identities=25% Similarity=0.571 Sum_probs=20.5
Q ss_pred CCCccc--cCccccccccccccccccceecCCC
Q psy509 29 GDTCHR--CRTTFSLVQRKHHCRACGQVFCQLC 59 (158)
Q Consensus 29 ~~~C~~--C~~~F~~~~RkhhCr~CG~vfC~~C 59 (158)
...|.. |++. .+ -..+|+.||..||...
T Consensus 25 ~~~C~~~~Ck~~-~~--l~f~C~~C~~~FC~~H 54 (86)
T 1wfe_A 25 SYSCSFKGCTDV-EL--VAVICPYCEKNFCLRH 54 (86)
T ss_dssp CEECCSTTCCCE-ES--SCEECTTTCCEECGGG
T ss_pred CCCCCCcCCCCC-Cc--cceECCCCCccccccc
Confidence 346876 8876 33 3569999999998754
No 120
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=54.64 E-value=4.2 Score=22.43 Aligned_cols=10 Identities=30% Similarity=0.896 Sum_probs=7.9
Q ss_pred CccccCcccc
Q psy509 31 TCHRCRTTFS 40 (158)
Q Consensus 31 ~C~~C~~~F~ 40 (158)
.|..|++.|.
T Consensus 14 ~C~~C~k~f~ 23 (48)
T 2epr_A 14 ACEICGKIFR 23 (48)
T ss_dssp EETTTTEEES
T ss_pred eCCCCCcccC
Confidence 6888888885
No 121
>3t6p_A Baculoviral IAP repeat-containing protein 2; ring, BIR, CARD, UBA, apoptosis, ubiquitin ligase, SMAC/ ubiquitin, caspase, IAP family, SMAC mimetic; 1.90A {Homo sapiens} PDB: 1qbh_A 2l9m_A 3eb5_A 3eb6_A 4auq_B
Probab=54.39 E-value=6.4 Score=32.55 Aligned_cols=43 Identities=28% Similarity=0.600 Sum_probs=30.6
Q ss_pred CCCccccCccccccccccccccccce-ecCCCCCCccccCCCCCCCceeeChhhHHHHhc
Q psy509 29 GDTCHRCRTTFSLVQRKHHCRACGQV-FCQLCSSKSTSLPKFGIEKEVRVCEDCHEKFTN 87 (158)
Q Consensus 29 ~~~C~~C~~~F~~~~RkhhCr~CG~v-fC~~Cs~~~~~lp~~~~~~~~RVC~~C~~~l~~ 87 (158)
...|.+|...|.-. .--.||+. ||..|.... +.|..|...+..
T Consensus 295 ~~~C~IC~~~~~~~----v~lpCgH~~fC~~C~~~~------------~~CP~CR~~i~~ 338 (345)
T 3t6p_A 295 ERTCKVCMDKEVSV----VFIPCGHLVVCQECAPSL------------RKCPICRGIIKG 338 (345)
T ss_dssp TCBCTTTSSSBCCE----EEETTCCEEECTTTGGGC------------SBCTTTCCBCCE
T ss_pred CCCCCccCCcCCce----EEcCCCChhHhHHHHhcC------------CcCCCCCCCccC
Confidence 46899999877522 22379999 999998653 567777765544
No 122
>4ic3_A E3 ubiquitin-protein ligase XIAP; ring domain, zinc-finger, E3 ligase; 1.78A {Homo sapiens} PDB: 4ic2_A
Probab=54.11 E-value=2.8 Score=26.40 Aligned_cols=42 Identities=21% Similarity=0.547 Sum_probs=28.3
Q ss_pred CCCccccCccccccccccccccccce-ecCCCCCCccccCCCCCCCceeeChhhHHHHh
Q psy509 29 GDTCHRCRTTFSLVQRKHHCRACGQV-FCQLCSSKSTSLPKFGIEKEVRVCEDCHEKFT 86 (158)
Q Consensus 29 ~~~C~~C~~~F~~~~RkhhCr~CG~v-fC~~Cs~~~~~lp~~~~~~~~RVC~~C~~~l~ 86 (158)
...|.+|...|.-. .--.||+. ||..|...+ +.|..|...+.
T Consensus 24 ~~~C~iC~~~~~~~----~~~pCgH~~~C~~C~~~~------------~~CP~Cr~~i~ 66 (74)
T 4ic3_A 24 EKLCKICMDRNIAI----VFVPCGHLVTCKQCAEAV------------DKCPMCYTVIT 66 (74)
T ss_dssp HTBCTTTSSSBCCE----EEETTCCBCCCHHHHTTC------------SBCTTTCCBCS
T ss_pred CCCCCCCCCCCCCE----EEcCCCChhHHHHhhhcC------------ccCCCcCcCcc
Confidence 46899998876421 22479999 999997654 45666655443
No 123
>4b4t_W RPN10, 26S proteasome regulatory subunit RPN10; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=54.02 E-value=2.7 Score=33.69 Aligned_cols=22 Identities=32% Similarity=0.406 Sum_probs=0.0
Q ss_pred hcchHHHHHHHHhcHHHHhhcC
Q psy509 134 LKEEEELQLALALSQSEAESNK 155 (158)
Q Consensus 134 ~~eeedl~~aia~Sl~e~e~~~ 155 (158)
-..|.||.+||.+||.|-.+++
T Consensus 222 p~~dpela~alr~s~eee~~rq 243 (268)
T 4b4t_W 222 PSMDPELAMALRLSMEEEQQRQ 243 (268)
T ss_dssp ----------------------
T ss_pred CCCCHHHHHHHHHhHHHHHHHH
Confidence 3568999999999998754443
No 124
>1pft_A TFIIB, PFTFIIBN; N-terminal domain, transcription initiation factor; NMR {Pyrococcus furiosus} SCOP: g.41.3.1
Probab=53.63 E-value=5.1 Score=23.42 Aligned_cols=25 Identities=24% Similarity=0.670 Sum_probs=13.6
Q ss_pred CccccCc-cc--ccccccccccccccee
Q psy509 31 TCHRCRT-TF--SLVQRKHHCRACGQVF 55 (158)
Q Consensus 31 ~C~~C~~-~F--~~~~RkhhCr~CG~vf 55 (158)
.|..|+. .+ ..-.....|..||.++
T Consensus 7 ~CP~C~~~~l~~d~~~gelvC~~CG~v~ 34 (50)
T 1pft_A 7 VCPACESAELIYDPERGEIVCAKCGYVI 34 (50)
T ss_dssp SCTTTSCCCEEEETTTTEEEESSSCCBC
T ss_pred eCcCCCCcceEEcCCCCeEECcccCCcc
Confidence 5777765 32 2223445666666655
No 125
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=53.25 E-value=6 Score=23.10 Aligned_cols=10 Identities=20% Similarity=0.919 Sum_probs=8.2
Q ss_pred CccccCcccc
Q psy509 31 TCHRCRTTFS 40 (158)
Q Consensus 31 ~C~~C~~~F~ 40 (158)
.|..|++.|.
T Consensus 12 ~C~~C~k~f~ 21 (66)
T 2drp_A 12 RCKVCSRVYT 21 (66)
T ss_dssp ECTTTCCEES
T ss_pred ECCCCcchhC
Confidence 5888888886
No 126
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=53.04 E-value=5.5 Score=24.11 Aligned_cols=10 Identities=30% Similarity=0.962 Sum_probs=5.8
Q ss_pred CccccCcccc
Q psy509 31 TCHRCRTTFS 40 (158)
Q Consensus 31 ~C~~C~~~F~ 40 (158)
.|..|++.|.
T Consensus 3 ~C~~C~~~f~ 12 (82)
T 2kmk_A 3 DCKICGKSFK 12 (82)
T ss_dssp ECSSSCCEES
T ss_pred cCCCCccccc
Confidence 3566666664
No 127
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=52.64 E-value=5 Score=18.80 Aligned_cols=12 Identities=25% Similarity=0.548 Sum_probs=8.2
Q ss_pred ccccccccccee
Q psy509 44 RKHHCRACGQVF 55 (158)
Q Consensus 44 RkhhCr~CG~vf 55 (158)
+.+.|..||+.|
T Consensus 2 k~~~C~~C~k~f 13 (27)
T 2kvh_A 2 KPFSCSLCPQRS 13 (27)
T ss_dssp CCEECSSSSCEE
T ss_pred cCccCCCcChhh
Confidence 345677777776
No 128
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=52.55 E-value=4.8 Score=28.14 Aligned_cols=25 Identities=32% Similarity=0.899 Sum_probs=16.1
Q ss_pred CccccCcccccc------------cccccccccccee
Q psy509 31 TCHRCRTTFSLV------------QRKHHCRACGQVF 55 (158)
Q Consensus 31 ~C~~C~~~F~~~------------~RkhhCr~CG~vf 55 (158)
.|..|++.|... .+.+.|..||..|
T Consensus 24 ~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F 60 (133)
T 2lt7_A 24 ICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVF 60 (133)
T ss_dssp EETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEE
T ss_pred ECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeec
Confidence 588888888521 2345677777766
No 129
>2jmo_A Parkin; IBR, E3 ligase, zinc binding domain, RBR; NMR {Homo sapiens}
Probab=52.49 E-value=5.3 Score=25.86 Aligned_cols=37 Identities=27% Similarity=0.533 Sum_probs=24.3
Q ss_pred CCcccCCCccccCcccc--ccccccccc-----cccceecCCCCCCc
Q psy509 24 PEWMDGDTCHRCRTTFS--LVQRKHHCR-----ACGQVFCQLCSSKS 63 (158)
Q Consensus 24 p~W~~~~~C~~C~~~F~--~~~RkhhCr-----~CG~vfC~~Cs~~~ 63 (158)
-.|=|... |+.... --.++..|. .||..||..|...+
T Consensus 25 ~~~CP~p~---C~~~v~~~~~~~~v~C~~~~~~~C~~~FC~~C~~~w 68 (80)
T 2jmo_A 25 GVLCPRPG---CGAGLLPEPDQRKVTCEGGNGLGCGFAFCRECKEAY 68 (80)
T ss_dssp SCCCCSSS---CCCCCCCCSCTTSBCTTSSSTTCCSCCEETTTTEEC
T ss_pred cEECCCCC---CCcccEECCCCCcCCCCCCCCCCCCCeeccccCccc
Confidence 44555544 443322 135678897 89999999998654
No 130
>3cc2_Z 50S ribosomal protein L37AE, 50S ribosomal protein L32E; genomic sequnece for R-proteins, ribonucleoprotein, ribosoma protein, RNA-binding; HET: 1MA OMU OMG UR3 PSU; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 3cc4_Z* 3cc7_Z* 3cce_Z* 3ccj_Z* 3ccl_Z* 3ccm_Z* 3ccq_Z* 3ccr_Z* 3ccs_Z* 3ccu_Z* 3ccv_Z* 3cd6_Z* 3cma_Z* 3cme_Z* 3i55_Z* 3i56_Z* 3cpw_Y* 4adx_Z
Probab=52.03 E-value=4.8 Score=28.48 Aligned_cols=28 Identities=18% Similarity=0.393 Sum_probs=15.3
Q ss_pred CccccCc-ccc-ccccccccccccceecCC
Q psy509 31 TCHRCRT-TFS-LVQRKHHCRACGQVFCQL 58 (158)
Q Consensus 31 ~C~~C~~-~F~-~~~RkhhCr~CG~vfC~~ 58 (158)
.|..|++ .+. .-....+|+.||.+|-+.
T Consensus 62 tCPfCGk~~vKR~avGIW~C~~Cgk~fAGG 91 (116)
T 3cc2_Z 62 ACPNCGEDRVDRQGTGIWQCSYCDYKFTGG 91 (116)
T ss_dssp ECSSSCCEEEEEEETTEEEETTTCCEEECC
T ss_pred cCCCCCCceeEecCceeEECCCCCCEEECC
Confidence 5777765 111 112346777777776443
No 131
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=51.29 E-value=5.9 Score=24.50 Aligned_cols=7 Identities=43% Similarity=0.942 Sum_probs=3.9
Q ss_pred ccCcccc
Q psy509 34 RCRTTFS 40 (158)
Q Consensus 34 ~C~~~F~ 40 (158)
.|++.|.
T Consensus 11 ~C~~~f~ 17 (90)
T 1a1h_A 11 SCDRRFS 17 (90)
T ss_dssp SCCCEES
T ss_pred CCCCccC
Confidence 4666554
No 132
>1yx4_A 26S proteasome non-ATPase regulatory subunit 4; polyubiquitin, UIM, hydrolase; NMR {Homo sapiens} PDB: 1yx5_A 1yx6_A 2kde_A 2kdf_A
Probab=51.01 E-value=5.6 Score=28.71 Aligned_cols=20 Identities=35% Similarity=0.451 Sum_probs=16.3
Q ss_pred cchHHHHHHHHhcHHHHhhc
Q psy509 135 KEEEELQLALALSQSEAESN 154 (158)
Q Consensus 135 ~eeedl~~aia~Sl~e~e~~ 154 (158)
..|.||.+||.+||.|-..+
T Consensus 37 ~~DPeLa~ALr~Smeee~~R 56 (132)
T 1yx4_A 37 SADPELALALRVSMEEQRQR 56 (132)
T ss_dssp GGCHHHHHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHhHHHHHHH
Confidence 45899999999999876554
No 133
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=50.95 E-value=7.3 Score=30.49 Aligned_cols=29 Identities=17% Similarity=0.597 Sum_probs=19.0
Q ss_pred ccCCCccccCcccc--cc---c---ccccccccccee
Q psy509 27 MDGDTCHRCRTTFS--LV---Q---RKHHCRACGQVF 55 (158)
Q Consensus 27 ~~~~~C~~C~~~F~--~~---~---RkhhCr~CG~vf 55 (158)
+....|.+|+...+ .+ . .-..|.+||+|.
T Consensus 196 v~~~~C~GC~~~lppq~~~~i~~~~~Iv~Cp~CgRIL 232 (256)
T 3na7_A 196 IKKQACGGCFIRLNDKIYTEVLTSGDMITCPYCGRIL 232 (256)
T ss_dssp CBTTBCTTTCCBCCHHHHHHHHHSSSCEECTTTCCEE
T ss_pred eeCCccCCCCeeeCHHHHHHHHCCCCEEECCCCCeeE
Confidence 34678999988665 22 1 236777777776
No 134
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=50.47 E-value=5.2 Score=18.81 Aligned_cols=10 Identities=30% Similarity=0.962 Sum_probs=6.5
Q ss_pred ccccccccee
Q psy509 46 HHCRACGQVF 55 (158)
Q Consensus 46 hhCr~CG~vf 55 (158)
+.|..||+.|
T Consensus 3 ~~C~~C~~~f 12 (29)
T 1ard_A 3 FVCEVCTRAF 12 (29)
T ss_dssp CBCTTTCCBC
T ss_pred eECCCCCccc
Confidence 5566777665
No 135
>3j21_g 50S ribosomal protein L40E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=50.20 E-value=6.3 Score=23.79 Aligned_cols=23 Identities=35% Similarity=0.694 Sum_probs=12.9
Q ss_pred CCccccCccccccccccccccccce
Q psy509 30 DTCHRCRTTFSLVQRKHHCRACGQV 54 (158)
Q Consensus 30 ~~C~~C~~~F~~~~RkhhCr~CG~v 54 (158)
..|..|+.. .-.+.-.|+.||..
T Consensus 15 ~iCpkC~a~--~~~gaw~CrKCG~~ 37 (51)
T 3j21_g 15 YVCLRCGAT--NPWGAKKCRKCGYK 37 (51)
T ss_dssp EECTTTCCE--ECTTCSSCSSSSSC
T ss_pred ccCCCCCCc--CCCCceecCCCCCc
Confidence 356666665 33455566666653
No 136
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Probab=49.85 E-value=5.2 Score=26.85 Aligned_cols=11 Identities=27% Similarity=0.609 Sum_probs=5.7
Q ss_pred cccccccccee
Q psy509 45 KHHCRACGQVF 55 (158)
Q Consensus 45 khhCr~CG~vf 55 (158)
.+.|..||+.|
T Consensus 74 ~~~C~~C~k~f 84 (129)
T 2wbt_A 74 QFVCPLCLMPF 84 (129)
T ss_dssp SEECTTTCCEE
T ss_pred CeECCCCCccc
Confidence 34455555555
No 137
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=49.55 E-value=8.4 Score=25.85 Aligned_cols=33 Identities=24% Similarity=0.761 Sum_probs=22.9
Q ss_pred cCCCccccCccccccccccccccccceecCCCCCC
Q psy509 28 DGDTCHRCRTTFSLVQRKHHCRACGQVFCQLCSSK 62 (158)
Q Consensus 28 ~~~~C~~C~~~F~~~~RkhhCr~CG~vfC~~Cs~~ 62 (158)
.+..|.+|.. |+ -.-+.-||.||++|=..|...
T Consensus 14 ~D~~C~VC~~-~t-~~~l~pCRvC~RvfH~~CL~r 46 (89)
T 1wil_A 14 NDEMCDVCEV-WT-AESLFPCRVCTRVFHDGCLRR 46 (89)
T ss_dssp CSCCCTTTCC-CC-SSCCSSCSSSSSCCCHHHHHH
T ss_pred CCcccCcccc-cc-ccceeccccccccccHhhccc
Confidence 4678999874 22 344578999999986666554
No 138
>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=49.41 E-value=5.9 Score=18.62 Aligned_cols=13 Identities=31% Similarity=0.917 Sum_probs=8.8
Q ss_pred cccccccccceec
Q psy509 44 RKHHCRACGQVFC 56 (158)
Q Consensus 44 RkhhCr~CG~vfC 56 (158)
+.+.|..||..|-
T Consensus 2 k~~~C~~C~~~f~ 14 (30)
T 2m0d_A 2 KPYQCDYCGRSFS 14 (30)
T ss_dssp CCEECTTTCCEES
T ss_pred cCccCCCCCcccC
Confidence 3466788888773
No 139
>3j21_i 50S ribosomal protein L37AE; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=49.36 E-value=6.8 Score=26.06 Aligned_cols=26 Identities=35% Similarity=0.838 Sum_probs=16.1
Q ss_pred CCccccCccccccccc----cccccccceecC
Q psy509 30 DTCHRCRTTFSLVQRK----HHCRACGQVFCQ 57 (158)
Q Consensus 30 ~~C~~C~~~F~~~~Rk----hhCr~CG~vfC~ 57 (158)
..|..|++. -+.|. -||+.||..|=+
T Consensus 36 y~CpfCGk~--~vkR~a~GIW~C~kCg~~~AG 65 (83)
T 3j21_i 36 HTCPVCGRK--AVKRISTGIWQCQKCGATFAG 65 (83)
T ss_dssp BCCSSSCSS--CEEEEETTEEEETTTCCEEEC
T ss_pred cCCCCCCCc--eeEecCcCeEEcCCCCCEEeC
Confidence 467778764 23332 477777777644
No 140
>3jyw_9 60S ribosomal protein L43; eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus}
Probab=49.25 E-value=7.9 Score=25.05 Aligned_cols=25 Identities=24% Similarity=0.619 Sum_probs=14.5
Q ss_pred CCccccCccccccccc----cccccccceec
Q psy509 30 DTCHRCRTTFSLVQRK----HHCRACGQVFC 56 (158)
Q Consensus 30 ~~C~~C~~~F~~~~Rk----hhCr~CG~vfC 56 (158)
..|..|++. -+.|. -||+.||..|=
T Consensus 27 y~C~fCgk~--~vkR~a~GIW~C~~C~~~~A 55 (72)
T 3jyw_9 27 YDCSFCGKK--TVKRGAAGIWTCSCCKKTVA 55 (72)
T ss_dssp BCCSSCCSS--CBSBCSSSCBCCSSSCCCCC
T ss_pred ccCCCCCCc--eeEecCCCeEECCCCCCEEe
Confidence 467777753 23332 46777776663
No 141
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=49.09 E-value=6.4 Score=21.18 Aligned_cols=11 Identities=27% Similarity=0.703 Sum_probs=8.1
Q ss_pred CCccccCcccc
Q psy509 30 DTCHRCRTTFS 40 (158)
Q Consensus 30 ~~C~~C~~~F~ 40 (158)
-.|..|++.|.
T Consensus 11 ~~C~~C~k~f~ 21 (45)
T 2epq_A 11 YSCPVCGLRFK 21 (45)
T ss_dssp SEETTTTEECS
T ss_pred CcCCCCCcccC
Confidence 36778888885
No 142
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=48.71 E-value=8.2 Score=25.20 Aligned_cols=9 Identities=22% Similarity=1.080 Sum_probs=6.3
Q ss_pred CccccCccc
Q psy509 31 TCHRCRTTF 39 (158)
Q Consensus 31 ~C~~C~~~F 39 (158)
.|..|++.|
T Consensus 21 ~C~~C~k~f 29 (115)
T 2dmi_A 21 RCKDCSAAY 29 (115)
T ss_dssp EBSSSSCEE
T ss_pred ECCccCchh
Confidence 577777766
No 143
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=48.63 E-value=7.7 Score=24.25 Aligned_cols=10 Identities=30% Similarity=0.896 Sum_probs=7.6
Q ss_pred CccccCcccc
Q psy509 31 TCHRCRTTFS 40 (158)
Q Consensus 31 ~C~~C~~~F~ 40 (158)
.|..|++.|.
T Consensus 9 ~C~~C~~~f~ 18 (95)
T 2yt9_A 9 ACEICGKIFR 18 (95)
T ss_dssp ECSSSCCEES
T ss_pred ECCCCCCccC
Confidence 5788888885
No 144
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1
Probab=48.25 E-value=7.1 Score=23.29 Aligned_cols=26 Identities=35% Similarity=0.774 Sum_probs=17.0
Q ss_pred CCcc--ccCcccccc------------cccccccccccee
Q psy509 30 DTCH--RCRTTFSLV------------QRKHHCRACGQVF 55 (158)
Q Consensus 30 ~~C~--~C~~~F~~~------------~RkhhCr~CG~vf 55 (158)
-.|. .|++.|..- .+.+.|..||+.|
T Consensus 20 ~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f 59 (73)
T 1f2i_G 20 YACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNF 59 (73)
T ss_dssp EECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEE
T ss_pred cCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchh
Confidence 3686 699999631 2346677777766
No 145
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=48.24 E-value=17 Score=23.16 Aligned_cols=26 Identities=27% Similarity=0.662 Sum_probs=17.4
Q ss_pred CCccccCcccccc------------cccccccccccee
Q psy509 30 DTCHRCRTTFSLV------------QRKHHCRACGQVF 55 (158)
Q Consensus 30 ~~C~~C~~~F~~~------------~RkhhCr~CG~vf 55 (158)
-.|..|++.|... .+.+.|..||..|
T Consensus 18 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f 55 (106)
T 2ee8_A 18 FICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAF 55 (106)
T ss_dssp CBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBC
T ss_pred eECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchh
Confidence 4799999999621 2345677777665
No 146
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=48.06 E-value=6.5 Score=18.42 Aligned_cols=12 Identities=42% Similarity=1.046 Sum_probs=8.2
Q ss_pred ccccccccccee
Q psy509 44 RKHHCRACGQVF 55 (158)
Q Consensus 44 RkhhCr~CG~vf 55 (158)
+.+.|..||+.|
T Consensus 2 k~~~C~~C~k~f 13 (28)
T 2kvf_A 2 RPYSCSVCGKRF 13 (28)
T ss_dssp CSEECSSSCCEE
T ss_pred cCccCCCCCccc
Confidence 345677787776
No 147
>2dip_A Zinc finger SWIM domain-containing protein 2; ZZ domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.44.1.6
Probab=47.99 E-value=17 Score=24.60 Aligned_cols=37 Identities=22% Similarity=0.528 Sum_probs=24.6
Q ss_pred CCCcccCCCccccCccccccccccccccccce-ecCCCC
Q psy509 23 APEWMDGDTCHRCRTTFSLVQRKHHCRACGQV-FCQLCS 60 (158)
Q Consensus 23 ~p~W~~~~~C~~C~~~F~~~~RkhhCr~CG~v-fC~~Cs 60 (158)
.+.+-.+-.|..|+.. .+...|++|..|... +|..|-
T Consensus 25 ~~~~H~gv~Cd~C~~~-pI~G~RykC~~C~d~DLC~~C~ 62 (98)
T 2dip_A 25 RLDKHLGIPCNNCKQF-PIEGKCYKCTECIEYHLCQECF 62 (98)
T ss_dssp CCSSCCCCCCSSSCCS-SCCSCEEEESSSSSCEEEHHHH
T ss_pred cccccCCCCCcCCCCC-CcccCeEECCCCCCccHHHHHH
Confidence 3455566789999862 345578888888543 666663
No 148
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Probab=47.92 E-value=6.6 Score=18.45 Aligned_cols=11 Identities=36% Similarity=0.887 Sum_probs=7.7
Q ss_pred cccccccccee
Q psy509 45 KHHCRACGQVF 55 (158)
Q Consensus 45 khhCr~CG~vf 55 (158)
.+.|..||..|
T Consensus 2 ~~~C~~C~k~f 12 (29)
T 1rik_A 2 KFACPECPKRF 12 (29)
T ss_dssp CEECSSSSCEE
T ss_pred CccCCCCCchh
Confidence 35677787776
No 149
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=47.71 E-value=8.9 Score=25.07 Aligned_cols=10 Identities=30% Similarity=0.909 Sum_probs=5.5
Q ss_pred CccccCcccc
Q psy509 31 TCHRCRTTFS 40 (158)
Q Consensus 31 ~C~~C~~~F~ 40 (158)
.|..|++.|.
T Consensus 9 ~C~~C~~~f~ 18 (124)
T 2dlq_A 9 ECPTCHKKFL 18 (124)
T ss_dssp CCTTTCCCCS
T ss_pred CCCCCCCcCC
Confidence 4555655553
No 150
>3iz5_m 60S ribosomal protein L43 (L37AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_m 1ysh_D 2zkr_z
Probab=47.71 E-value=8.2 Score=26.14 Aligned_cols=27 Identities=33% Similarity=0.620 Sum_probs=16.7
Q ss_pred CCccccCccccccccc----cccccccceecCC
Q psy509 30 DTCHRCRTTFSLVQRK----HHCRACGQVFCQL 58 (158)
Q Consensus 30 ~~C~~C~~~F~~~~Rk----hhCr~CG~vfC~~ 58 (158)
..|..|++. -+.|. -||+.||..|=+.
T Consensus 37 y~CpfCgk~--~vkR~a~GIW~C~~Cg~~~AGG 67 (92)
T 3iz5_m 37 YFCEFCGKF--AVKRKAVGIWGCKDCGKVKAGG 67 (92)
T ss_dssp BCCTTTCSS--CBEEEETTEEECSSSCCEEECC
T ss_pred ccCcccCCC--eeEecCcceEEcCCCCCEEeCC
Confidence 468888764 23332 4788887777443
No 151
>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82
Probab=47.22 E-value=8.4 Score=26.72 Aligned_cols=14 Identities=43% Similarity=1.049 Sum_probs=8.1
Q ss_pred ccccccccccccee
Q psy509 42 VQRKHHCRACGQVF 55 (158)
Q Consensus 42 ~~RkhhCr~CG~vf 55 (158)
+.-..-|+.||..|
T Consensus 64 ~v~p~~C~~CG~~F 77 (105)
T 2gmg_A 64 LIKPAQCRKCGFVF 77 (105)
T ss_dssp EECCCBBTTTCCBC
T ss_pred EEECcChhhCcCee
Confidence 34445566666666
No 152
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=46.89 E-value=8.7 Score=24.83 Aligned_cols=26 Identities=23% Similarity=0.588 Sum_probs=17.9
Q ss_pred CCccccCcccccc----------cccccccccccee
Q psy509 30 DTCHRCRTTFSLV----------QRKHHCRACGQVF 55 (158)
Q Consensus 30 ~~C~~C~~~F~~~----------~RkhhCr~CG~vf 55 (158)
-.|..|++.|... .+.+.|..||+.|
T Consensus 17 ~~C~~C~~~f~~~~~l~~H~~~H~~~~~C~~C~~~f 52 (107)
T 1wjp_A 17 YQCRLCNAKLSSLLEQGSHERLCRNAAVCPYCSLRF 52 (107)
T ss_dssp CBCTTTCCBCSSHHHHHHHHHHHHHSBCCTTTCCCB
T ss_pred eECCCCCCccCCHHHHHHHHHHCCCCccCCCCCCcc
Confidence 4799999999632 2335677777766
No 153
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=46.88 E-value=8.4 Score=24.92 Aligned_cols=24 Identities=33% Similarity=0.895 Sum_probs=15.0
Q ss_pred CccccCcccccc------------cccccccccccee
Q psy509 31 TCHRCRTTFSLV------------QRKHHCRACGQVF 55 (158)
Q Consensus 31 ~C~~C~~~F~~~------------~RkhhCr~CG~vf 55 (158)
.| .|++.|... .+.+.|..||+.|
T Consensus 12 ~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f 47 (110)
T 2csh_A 12 PC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKF 47 (110)
T ss_dssp EC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEE
T ss_pred ec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCccc
Confidence 57 788888521 2345677777766
No 154
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=46.84 E-value=7 Score=18.14 Aligned_cols=10 Identities=40% Similarity=1.158 Sum_probs=5.8
Q ss_pred ccccccccee
Q psy509 46 HHCRACGQVF 55 (158)
Q Consensus 46 hhCr~CG~vf 55 (158)
+.|..||..|
T Consensus 3 ~~C~~C~~~f 12 (29)
T 2m0e_A 3 HKCPHCDKKF 12 (29)
T ss_dssp CCCSSCCCCC
T ss_pred CcCCCCCccc
Confidence 4566666655
No 155
>1wim_A KIAA0161 protein; ring finger domain, UBCM4-interacting protein 4, UIP4, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=46.66 E-value=4.9 Score=26.24 Aligned_cols=34 Identities=24% Similarity=0.632 Sum_probs=21.5
Q ss_pred CCccccCccccccccccccccccceecCCCCCCcc
Q psy509 30 DTCHRCRTTFSLVQRKHHCRACGQVFCQLCSSKST 64 (158)
Q Consensus 30 ~~C~~C~~~F~~~~RkhhCr~CG~vfC~~Cs~~~~ 64 (158)
..|.+|-..|..-. -..-..||+.||..|....+
T Consensus 6 ~~C~IC~~~~~~~~-~~~l~~CgH~FC~~Cl~~~~ 39 (94)
T 1wim_A 6 SGCKLCLGEYPVEQ-MTTIAQCQCIFCTLCLKQYV 39 (94)
T ss_dssp CCCSSSCCCCBGGG-EEEETTTTEEEEHHHHHHHH
T ss_pred cCCcccCccccccc-ceEcCCCCCcccHHHHHHHH
Confidence 36888877664211 01113699999999987643
No 156
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=52.14 E-value=4.2 Score=18.91 Aligned_cols=11 Identities=36% Similarity=0.942 Sum_probs=7.1
Q ss_pred cccccccccee
Q psy509 45 KHHCRACGQVF 55 (158)
Q Consensus 45 khhCr~CG~vf 55 (158)
.+-|..||+.|
T Consensus 2 p~~C~~C~k~f 12 (26)
T 2lvu_A 2 PYVCERCGKRF 12 (26)
Confidence 35577777766
No 157
>2fiy_A Protein FDHE homolog; FDHE protein, structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pseudomonas aeruginosa} SCOP: e.59.1.1
Probab=46.20 E-value=5.2 Score=32.71 Aligned_cols=67 Identities=15% Similarity=0.404 Sum_probs=41.9
Q ss_pred CCcccCCCccccCccc--ccc--------ccccccccccce------ecCCCCCCc-cccCCCC--------CCCceeeC
Q psy509 24 PEWMDGDTCHRCRTTF--SLV--------QRKHHCRACGQV------FCQLCSSKS-TSLPKFG--------IEKEVRVC 78 (158)
Q Consensus 24 p~W~~~~~C~~C~~~F--~~~--------~RkhhCr~CG~v------fC~~Cs~~~-~~lp~~~--------~~~~~RVC 78 (158)
+.|. ...|..|+..= +++ .|..||..||.- -|..|-+.. +.+-.+. ....+-+|
T Consensus 178 ~~~~-~~~CPvCGs~P~~s~l~~~g~~~G~R~l~Cs~C~t~W~~~R~~C~~Cg~~~~l~y~~~e~~~~~~~~~~~r~e~C 256 (309)
T 2fiy_A 178 ETES-RTLCPACGSPPMAGMIRQGGKETGLRYLSCSLCACEWHYVRIKCSHCEESKHLAYLSLEHDGQPAEKAVLRAETC 256 (309)
T ss_dssp CCTT-CSSCTTTCCCEEEEEEEC----CCEEEEEETTTCCEEECCTTSCSSSCCCSCCEEECCCC-CCCSTTCSEEEEEE
T ss_pred cccc-CCCCCCCCCcCceeEEeecCCCCCcEEEEeCCCCCEEeecCcCCcCCCCCCCeeEEEecCccccCCCcceEEEEc
Confidence 3454 45899998643 222 257899999854 788887753 1111111 12347799
Q ss_pred hhhHHHHhcccCC
Q psy509 79 EDCHEKFTNYYRS 91 (158)
Q Consensus 79 ~~C~~~l~~~~~~ 91 (158)
..|...+.-.+..
T Consensus 257 ~~C~~YlK~~~~~ 269 (309)
T 2fiy_A 257 PSCQGYLKQFYLE 269 (309)
T ss_dssp TTTTEEEEEEETT
T ss_pred ccccchHhhhhhc
Confidence 9999888765443
No 158
>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=45.87 E-value=7.3 Score=18.14 Aligned_cols=11 Identities=45% Similarity=1.192 Sum_probs=7.1
Q ss_pred cccccccccee
Q psy509 45 KHHCRACGQVF 55 (158)
Q Consensus 45 khhCr~CG~vf 55 (158)
.+.|..||..|
T Consensus 2 ~~~C~~C~k~f 12 (29)
T 2m0f_A 2 PLKCRECGKQF 12 (29)
T ss_dssp CEECTTTSCEE
T ss_pred CccCCCCCCcc
Confidence 35577777766
No 159
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=45.57 E-value=2.8 Score=28.77 Aligned_cols=49 Identities=20% Similarity=0.318 Sum_probs=31.8
Q ss_pred cCCCccccCccccccc----------c----ccccccccceecCCCCCCccccCCCCCCCceeeChhhHHH
Q psy509 28 DGDTCHRCRTTFSLVQ----------R----KHHCRACGQVFCQLCSSKSTSLPKFGIEKEVRVCEDCHEK 84 (158)
Q Consensus 28 ~~~~C~~C~~~F~~~~----------R----khhCr~CG~vfC~~Cs~~~~~lp~~~~~~~~RVC~~C~~~ 84 (158)
+.+.|.+|...|...- . ...-..||++|+..|...++.. ...|..|...
T Consensus 36 ~~d~CaIC~~~~~~~c~~C~~~~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~--------~~~CP~Cr~~ 98 (106)
T 3dpl_R 36 VVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKT--------RQVCPLDNRE 98 (106)
T ss_dssp CSCCCSSSCSCTTSCCTTHHHHTTCC---CCCEEEETTSCEEEHHHHHHHHTT--------CSBCSSSCSB
T ss_pred CCCCCccCChhHhCcCchhhccccccCCccceEeecccCcEECHHHHHHHHHc--------CCcCcCCCCc
Confidence 4679999999886421 0 0112469999999998887432 2456666543
No 160
>4hc9_A Trans-acting T-cell-specific transcription factor; zinc finger, GATA transcription factor, DNA bridging, transc DNA complex; HET: DNA; 1.60A {Homo sapiens} PDB: 4hc7_A* 4hca_A* 3dfx_A* 3dfv_D* 2gat_A* 3gat_A* 1gat_A* 1gau_A* 1gnf_A 1y0j_A 2l6y_A 2l6z_A
Probab=45.53 E-value=15 Score=25.62 Aligned_cols=34 Identities=21% Similarity=0.396 Sum_probs=19.9
Q ss_pred ceecCCCCCCccccCCCCCCCceeeChhhHHHHhc
Q psy509 53 QVFCQLCSSKSTSLPKFGIEKEVRVCEDCHEKFTN 87 (158)
Q Consensus 53 ~vfC~~Cs~~~~~lp~~~~~~~~RVC~~C~~~l~~ 87 (158)
..+|..|.....++=.-|... ..+|..|.-.+..
T Consensus 59 ~~~C~~C~t~~tp~WRr~~~g-~~lCNaCgl~~~~ 92 (115)
T 4hc9_A 59 GTSCANCQTTTTTLWRRNANG-DPVCNACGLYYKL 92 (115)
T ss_dssp TCCCTTTCCSCCSSCEECTTS-CEECHHHHHHHHH
T ss_pred cccCCCcCCCCcceeEECCCC-CCcchHHHHHHHH
Confidence 346777766554442223222 5789999877654
No 161
>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=45.38 E-value=6.4 Score=18.58 Aligned_cols=12 Identities=17% Similarity=0.357 Sum_probs=8.2
Q ss_pred ccccccccccee
Q psy509 44 RKHHCRACGQVF 55 (158)
Q Consensus 44 RkhhCr~CG~vf 55 (158)
+.+.|..||+.|
T Consensus 2 k~~~C~~C~k~f 13 (27)
T 2kvg_A 2 APYRCPLCRAGC 13 (27)
T ss_dssp CTEEETTTTEEE
T ss_pred cCcCCCCCCccc
Confidence 345677787776
No 162
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=45.01 E-value=7.7 Score=23.40 Aligned_cols=6 Identities=50% Similarity=1.049 Sum_probs=3.0
Q ss_pred cCcccc
Q psy509 35 CRTTFS 40 (158)
Q Consensus 35 C~~~F~ 40 (158)
|++.|.
T Consensus 15 C~~~f~ 20 (79)
T 2dlk_A 15 CGRIFS 20 (79)
T ss_dssp TCCEES
T ss_pred CcCccC
Confidence 555553
No 163
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=44.93 E-value=8.8 Score=23.41 Aligned_cols=11 Identities=36% Similarity=0.917 Sum_probs=8.7
Q ss_pred CCccccCcccc
Q psy509 30 DTCHRCRTTFS 40 (158)
Q Consensus 30 ~~C~~C~~~F~ 40 (158)
-.|..|++.|.
T Consensus 16 ~~C~~C~~~f~ 26 (86)
T 1x6h_A 16 YACSHCDKTFR 26 (86)
T ss_dssp EECSSSSCEES
T ss_pred CcCCCCCCccC
Confidence 36888998886
No 164
>3izc_m 60S ribosomal protein RPL43 (L37AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins; NMR {Saccharomyces cerevisiae} PDB: 3izs_m 3o58_g 3o5h_g 3u5e_p 3u5i_p 4b6a_p 1s1i_9
Probab=44.48 E-value=10 Score=25.67 Aligned_cols=26 Identities=23% Similarity=0.583 Sum_probs=15.7
Q ss_pred CCccccCccccccccc----cccccccceecC
Q psy509 30 DTCHRCRTTFSLVQRK----HHCRACGQVFCQ 57 (158)
Q Consensus 30 ~~C~~C~~~F~~~~Rk----hhCr~CG~vfC~ 57 (158)
..|..|++. -+.|. -||+.||..|=+
T Consensus 37 y~CpfCgk~--~vkR~a~GIW~C~~C~~~~AG 66 (92)
T 3izc_m 37 YDCSFCGKK--TVKRGAAGIWTCSCCKKTVAG 66 (92)
T ss_dssp CCCSSSCSS--CCEEEETTEEECTTTCCEEEC
T ss_pred CcCCCCCCc--eeeecccceEEcCCCCCEEeC
Confidence 467777753 23332 477777777644
No 165
>3h0g_L DNA-directed RNA polymerases I, II, and III subunit rpabc4; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=44.24 E-value=14 Score=23.23 Aligned_cols=25 Identities=24% Similarity=0.598 Sum_probs=18.0
Q ss_pred CCCccccCccccccc-cccccccccc
Q psy509 29 GDTCHRCRTTFSLVQ-RKHHCRACGQ 53 (158)
Q Consensus 29 ~~~C~~C~~~F~~~~-RkhhCr~CG~ 53 (158)
.-.|..|+..|.+-. -...|+.||.
T Consensus 21 ~Y~C~~Cg~~~~l~~~~~iRC~~CG~ 46 (63)
T 3h0g_L 21 IYLCADCGARNTIQAKEVIRCRECGH 46 (63)
T ss_dssp CCBCSSSCCBCCCCSSSCCCCSSSCC
T ss_pred EEECCCCCCeeecCCCCceECCCCCc
Confidence 358999999998543 3466777775
No 166
>3c5k_A HD6, histone deacetylase 6; HDAC6, zinc finger, actin-binding, chromatin regulator, cytoplasm, hydrolase, metal-binding, nucleus, phosphoprotein; 1.55A {Homo sapiens} PDB: 3gv4_A 3phd_A
Probab=43.89 E-value=11 Score=25.98 Aligned_cols=26 Identities=31% Similarity=0.635 Sum_probs=19.8
Q ss_pred CCCccccCccccccccccccccccceecCC
Q psy509 29 GDTCHRCRTTFSLVQRKHHCRACGQVFCQL 58 (158)
Q Consensus 29 ~~~C~~C~~~F~~~~RkhhCr~CG~vfC~~ 58 (158)
...|..|...=+++ -|-.||.|.|++
T Consensus 24 ~~~C~~C~~~~~~W----~CL~CG~vgCgr 49 (109)
T 3c5k_A 24 TQPCGDCGTIQENW----VCLSCYQVYCGR 49 (109)
T ss_dssp TCCCTTTCCCSSEE----EETTTCCEEECT
T ss_pred CCcCccccCCCCee----eeeecCccccCC
Confidence 35799998765543 399999999874
No 167
>3f6q_B LIM and senescent cell antigen-like-containing domain protein 1; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 2kbx_B 3ixe_B
Probab=43.81 E-value=19 Score=21.60 Aligned_cols=53 Identities=23% Similarity=0.454 Sum_probs=27.0
Q ss_pred CCCccccCcccccc-------ccccccccccceecCCCCCCccccCCCCCCCceeeChhhHHHH
Q psy509 29 GDTCHRCRTTFSLV-------QRKHHCRACGQVFCQLCSSKSTSLPKFGIEKEVRVCEDCHEKF 85 (158)
Q Consensus 29 ~~~C~~C~~~F~~~-------~RkhhCr~CG~vfC~~Cs~~~~~lp~~~~~~~~RVC~~C~~~l 85 (158)
...|..|++..... .+..| ..| ..|..|....... .+......-.|..||..+
T Consensus 11 ~~~C~~C~~~i~~~e~~~~~~~~~~H-~~C--F~C~~C~~~L~~~-~~~~~~g~~yC~~~y~~l 70 (72)
T 3f6q_B 11 SATCERCKGGFAPAEKIVNSNGELYH-EQC--FVCAQCFQQFPEG-LFYEFEGRKYCEHDFQML 70 (72)
T ss_dssp TCBCTTTCCBCCTTCEEEEETTEEEE-TTT--SSCTTTCCCCGGG-CCEEETTEEECHHHHHHH
T ss_pred CccchhcCccccCCceEEEeCcCeeC-cCC--CcccCCCCCCCCC-CeEeECCeEeCHHHHHHh
Confidence 35799998876521 12222 112 2345555442222 122234467899999765
No 168
>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1
Probab=43.59 E-value=7.3 Score=22.91 Aligned_cols=13 Identities=31% Similarity=0.738 Sum_probs=10.9
Q ss_pred cccccccccceec
Q psy509 44 RKHHCRACGQVFC 56 (158)
Q Consensus 44 RkhhCr~CG~vfC 56 (158)
+++.|+.||.|+=
T Consensus 3 ~~y~C~vCGyvyd 15 (46)
T 6rxn_A 3 QKYVCNVCGYEYD 15 (46)
T ss_dssp CCEEETTTCCEEC
T ss_pred CEEECCCCCeEEe
Confidence 5789999999873
No 169
>1tot_A CREB-binding protein; zinc binding, CBP, TAZ2, transferase; NMR {Mus musculus} SCOP: g.44.1.6
Probab=43.37 E-value=3.9 Score=24.56 Aligned_cols=20 Identities=35% Similarity=1.082 Sum_probs=13.9
Q ss_pred CccccCccccccccccccccccc
Q psy509 31 TCHRCRTTFSLVQRKHHCRACGQ 53 (158)
Q Consensus 31 ~C~~C~~~F~~~~RkhhCr~CG~ 53 (158)
.|..|++. +.+|.+|..|..
T Consensus 8 ~Cd~C~~~---ig~R~~C~~C~d 27 (52)
T 1tot_A 8 TCNECKHH---VETRWHCTVCED 27 (52)
T ss_dssp EETTTTEE---ESSEEEESSSSS
T ss_pred ECCCCCCC---CcceEEcCCCCC
Confidence 57788876 256788887743
No 170
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=43.23 E-value=24 Score=24.21 Aligned_cols=35 Identities=20% Similarity=0.616 Sum_probs=26.1
Q ss_pred Ccc-cCCCccccCccccccccccccccccceecCCCCCCcc
Q psy509 25 EWM-DGDTCHRCRTTFSLVQRKHHCRACGQVFCQLCSSKST 64 (158)
Q Consensus 25 ~W~-~~~~C~~C~~~F~~~~RkhhCr~CG~vfC~~Cs~~~~ 64 (158)
.|. +...|..|++.=+ ..|..|...||..|....+
T Consensus 53 ~W~Cp~c~C~~C~k~~~-----~~C~~Cp~sfC~~c~~g~l 88 (107)
T 4gne_A 53 KWECPWHQCDECSSAAV-----SFCEFCPHSFCKDHEKGAL 88 (107)
T ss_dssp CCCCGGGBCTTTCSBCC-----EECSSSSCEECTTTCTTSC
T ss_pred CEECCCCCCCcCCCCCC-----cCcCCCCcchhhhccCCcc
Confidence 466 5567778887532 6799999999999987654
No 171
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=42.12 E-value=9.1 Score=19.24 Aligned_cols=13 Identities=31% Similarity=0.792 Sum_probs=9.4
Q ss_pred cccccccccceec
Q psy509 44 RKHHCRACGQVFC 56 (158)
Q Consensus 44 RkhhCr~CG~vfC 56 (158)
+.+.|..||+.|-
T Consensus 8 k~~~C~~C~k~f~ 20 (36)
T 2els_A 8 KIFTCEYCNKVFK 20 (36)
T ss_dssp CCEECTTTCCEES
T ss_pred CCEECCCCCceeC
Confidence 5577888888773
No 172
>3a43_A HYPD, hydrogenase nickel incorporation protein HYPA; [NIFE] hydrogenase maturation, zinc-finger, nickel binding, metal-binding; HET: FME; 2.30A {Pyrococcus kodakaraensis} PDB: 3a44_A*
Probab=41.98 E-value=8.5 Score=27.62 Aligned_cols=10 Identities=30% Similarity=0.996 Sum_probs=5.3
Q ss_pred ccccCccccc
Q psy509 32 CHRCRTTFSL 41 (158)
Q Consensus 32 C~~C~~~F~~ 41 (158)
|..|+..|..
T Consensus 73 C~~CG~~~~~ 82 (139)
T 3a43_A 73 CRNCNYEWKL 82 (139)
T ss_dssp ETTTCCEEEG
T ss_pred CCCCCCEEec
Confidence 5555555544
No 173
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=41.74 E-value=8 Score=18.08 Aligned_cols=10 Identities=20% Similarity=0.438 Sum_probs=6.5
Q ss_pred ccccccccee
Q psy509 46 HHCRACGQVF 55 (158)
Q Consensus 46 hhCr~CG~vf 55 (158)
+.|..||..|
T Consensus 3 ~~C~~C~k~f 12 (30)
T 1klr_A 3 YQCQYCEFRS 12 (30)
T ss_dssp CCCSSSSCCC
T ss_pred ccCCCCCCcc
Confidence 4566777665
No 174
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=41.36 E-value=8.7 Score=18.15 Aligned_cols=10 Identities=30% Similarity=0.893 Sum_probs=6.6
Q ss_pred ccccccccee
Q psy509 46 HHCRACGQVF 55 (158)
Q Consensus 46 hhCr~CG~vf 55 (158)
+.|..||..|
T Consensus 3 ~~C~~C~k~f 12 (30)
T 1paa_A 3 YACGLCNRAF 12 (30)
T ss_dssp SBCTTTCCBC
T ss_pred cCCcccCccc
Confidence 4577777766
No 175
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=41.34 E-value=9.8 Score=29.14 Aligned_cols=31 Identities=3% Similarity=-0.132 Sum_probs=21.3
Q ss_pred CCccccCccccccccccccccccceecCCCCCCcc
Q psy509 30 DTCHRCRTTFSLVQRKHHCRACGQVFCQLCSSKST 64 (158)
Q Consensus 30 ~~C~~C~~~F~~~~RkhhCr~CG~vfC~~Cs~~~~ 64 (158)
-.|.+|...|. .-..-.||++||..|...+.
T Consensus 209 ~~c~i~~~~~~----dPv~~~~gh~f~~~~i~~~~ 239 (281)
T 2c2l_A 209 LCGKISFELMR----EPCITPSGITYDRKDIEEHL 239 (281)
T ss_dssp TBCTTTCSBCS----SEEECSSCCEEETTHHHHHH
T ss_pred cCCcCcCCHhc----CCeECCCCCEECHHHHHHHH
Confidence 46888877664 22224599999999976653
No 176
>2k4x_A 30S ribosomal protein S27AE; metal-binding, ribonucleoprotein, zinc, zinc-finger, structural genomics, PSI-2; NMR {Thermoplasma acidophilum} SCOP: g.41.8.8
Probab=41.17 E-value=12 Score=22.68 Aligned_cols=26 Identities=27% Similarity=0.625 Sum_probs=14.6
Q ss_pred CCccccCc-cc-ccccccccccccccee
Q psy509 30 DTCHRCRT-TF-SLVQRKHHCRACGQVF 55 (158)
Q Consensus 30 ~~C~~C~~-~F-~~~~RkhhCr~CG~vf 55 (158)
..|..|+. .| ....-+++|..||...
T Consensus 19 ~fCPkCG~~~~ma~~~dr~~C~kCgyt~ 46 (55)
T 2k4x_A 19 RFCPRCGPGVFLAEHADRYSCGRCGYTE 46 (55)
T ss_dssp CCCTTTTTTCCCEECSSEEECTTTCCCE
T ss_pred ccCcCCCCceeEeccCCEEECCCCCCEE
Confidence 46888875 22 1112356777776653
No 177
>1yk4_A Rubredoxin, RD; electron transport; 0.69A {Pyrococcus abyssi} PDB: 2pya_A 1yk5_A 1bq8_A 1bq9_A* 3kyu_A 3kyv_A 3kyw_A 3kyx_A 3kyy_A 3ryg_A 3rz6_A 3rzt_A 3ss2_A 1brf_A 1caa_A 1cad_A 1vcx_A 1zrp_A 1iu5_A 1iu6_A ...
Probab=41.10 E-value=8.3 Score=23.18 Aligned_cols=14 Identities=29% Similarity=0.880 Sum_probs=10.9
Q ss_pred cccccccccceecC
Q psy509 44 RKHHCRACGQVFCQ 57 (158)
Q Consensus 44 RkhhCr~CG~vfC~ 57 (158)
+++.|+.||.|+=.
T Consensus 1 ~~~~C~~CGyvYd~ 14 (52)
T 1yk4_A 1 AKLSCKICGYIYDE 14 (52)
T ss_dssp CEEEESSSSCEEET
T ss_pred CcEEeCCCCeEECC
Confidence 36789999998743
No 178
>2dar_A PDZ and LIM domain protein 5; enigma homolog protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=40.63 E-value=41 Score=21.39 Aligned_cols=55 Identities=25% Similarity=0.445 Sum_probs=27.4
Q ss_pred CCCccccCcccc-----ccccccccccccceecCCCCCCccccCCCCCCCceeeChhhHHHHhc
Q psy509 29 GDTCHRCRTTFS-----LVQRKHHCRACGQVFCQLCSSKSTSLPKFGIEKEVRVCEDCHEKFTN 87 (158)
Q Consensus 29 ~~~C~~C~~~F~-----~~~RkhhCr~CG~vfC~~Cs~~~~~lp~~~~~~~~RVC~~C~~~l~~ 87 (158)
...|..|++... ...+..| ..| ..|..|...... ..+......-.|..||..+..
T Consensus 25 ~~~C~~C~~~I~~~~v~a~~~~~H-~~C--F~C~~C~~~L~~-~~f~~~~g~~yC~~cy~~~f~ 84 (90)
T 2dar_A 25 TPMCAHCNQVIRGPFLVALGKSWH-PEE--FNCAHCKNTMAY-IGFVEEKGALYCELCYEKFFA 84 (90)
T ss_dssp CCBBSSSCCBCCSCEEEETTEEEC-TTT--CBCSSSCCBCSS-SCBEESSSCEECHHHHHHHTS
T ss_pred CCCCccCCCEecceEEEECCcccc-ccC--CccCCCCCCCCC-CEeEeECCEEECHHHHHHHcC
Confidence 568999998663 1122222 111 234444332111 112123345689999987654
No 179
>2apo_B Ribosome biogenesis protein NOP10; protein-protein complex, box H/ACA, snoRNP, pseudouridine synthase, RNA modification; 1.95A {Methanocaldococcus jannaschii} SCOP: g.41.16.1 PDB: 2aqc_A
Probab=39.80 E-value=17 Score=22.61 Aligned_cols=24 Identities=29% Similarity=0.821 Sum_probs=16.8
Q ss_pred CCccccCccccccccccccccccceecC
Q psy509 30 DTCHRCRTTFSLVQRKHHCRACGQVFCQ 57 (158)
Q Consensus 30 ~~C~~C~~~F~~~~RkhhCr~CG~vfC~ 57 (158)
..|..|+. .++ ++.|..||...-.
T Consensus 7 r~C~~Cgv-YTL---k~~CP~CG~~T~~ 30 (60)
T 2apo_B 7 KKCPKCGL-YTL---KEICPKCGEKTVI 30 (60)
T ss_dssp EECTTTCC-EES---SSBCSSSCSBCBC
T ss_pred eeCCCCCC-Eec---cccCcCCCCcCCC
Confidence 36888865 333 8889999987543
No 180
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=39.04 E-value=7.4 Score=26.13 Aligned_cols=10 Identities=20% Similarity=0.584 Sum_probs=8.7
Q ss_pred CccccCcccc
Q psy509 31 TCHRCRTTFS 40 (158)
Q Consensus 31 ~C~~C~~~F~ 40 (158)
.|..|++.|.
T Consensus 20 ~C~~Cgk~F~ 29 (102)
T 2ghf_A 20 ECKYCTFQTP 29 (102)
T ss_dssp ECSSCSCEES
T ss_pred CCCCCCCccC
Confidence 6999999996
No 181
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=38.87 E-value=11 Score=18.61 Aligned_cols=12 Identities=25% Similarity=0.503 Sum_probs=8.8
Q ss_pred ccccccccccee
Q psy509 44 RKHHCRACGQVF 55 (158)
Q Consensus 44 RkhhCr~CG~vf 55 (158)
+.+.|..||+.|
T Consensus 6 k~~~C~~C~k~f 17 (35)
T 2elx_A 6 SGYVCALCLKKF 17 (35)
T ss_dssp CSEECSSSCCEE
T ss_pred CCeECCCCcchh
Confidence 456788888877
No 182
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=38.25 E-value=10 Score=18.91 Aligned_cols=12 Identities=42% Similarity=1.173 Sum_probs=8.4
Q ss_pred ccccccccccee
Q psy509 44 RKHHCRACGQVF 55 (158)
Q Consensus 44 RkhhCr~CG~vf 55 (158)
+.+.|..||+.|
T Consensus 8 ~~~~C~~C~k~f 19 (36)
T 2elr_A 8 KTHLCDMCGKKF 19 (36)
T ss_dssp SSCBCTTTCCBC
T ss_pred CCeecCcCCCCc
Confidence 556777777766
No 183
>1gh9_A 8.3 kDa protein (gene MTH1184); beta+alpha complex structure, structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: g.41.6.1
Probab=38.07 E-value=10 Score=24.38 Aligned_cols=23 Identities=22% Similarity=0.719 Sum_probs=12.6
Q ss_pred CccccCcccc--cccccccccccccee
Q psy509 31 TCHRCRTTFS--LVQRKHHCRACGQVF 55 (158)
Q Consensus 31 ~C~~C~~~F~--~~~RkhhCr~CG~vf 55 (158)
.|. |+..+- -..+.|-|. ||..+
T Consensus 6 ~C~-C~~~~~~~~~~kT~~C~-CG~~~ 30 (71)
T 1gh9_A 6 RCD-CGRALYSREGAKTRKCV-CGRTV 30 (71)
T ss_dssp EET-TSCCEEEETTCSEEEET-TTEEE
T ss_pred ECC-CCCEEEEcCCCcEEECC-CCCee
Confidence 366 665331 234556776 77664
No 184
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=44.04 E-value=6.8 Score=18.52 Aligned_cols=11 Identities=36% Similarity=1.056 Sum_probs=7.1
Q ss_pred cccccccceec
Q psy509 46 HHCRACGQVFC 56 (158)
Q Consensus 46 hhCr~CG~vfC 56 (158)
+.|..||..|-
T Consensus 3 ~~C~~C~k~f~ 13 (29)
T 2lvt_A 3 CQCVMCGKAFT 13 (29)
Confidence 55777777663
No 185
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=37.68 E-value=12 Score=17.19 Aligned_cols=10 Identities=30% Similarity=0.906 Sum_probs=7.8
Q ss_pred CccccCcccc
Q psy509 31 TCHRCRTTFS 40 (158)
Q Consensus 31 ~C~~C~~~F~ 40 (158)
.|..|++.|.
T Consensus 3 ~C~~C~k~f~ 12 (27)
T 1znf_A 3 KCGLCERSFV 12 (27)
T ss_dssp BCSSSCCBCS
T ss_pred cCCCCCCcCC
Confidence 5788888886
No 186
>2dj7_A Actin-binding LIM protein 3; LIM domain, Zn binding protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=37.12 E-value=56 Score=20.40 Aligned_cols=60 Identities=18% Similarity=0.296 Sum_probs=31.8
Q ss_pred CCCcccCCCccccCccccc------cccccccccccceecCCCCCCccccCCCCCCCceeeChhhHHHHhc
Q psy509 23 APEWMDGDTCHRCRTTFSL------VQRKHHCRACGQVFCQLCSSKSTSLPKFGIEKEVRVCEDCHEKFTN 87 (158)
Q Consensus 23 ~p~W~~~~~C~~C~~~F~~------~~RkhhCr~CG~vfC~~Cs~~~~~lp~~~~~~~~RVC~~C~~~l~~ 87 (158)
++.+.....|..|++.... +.+..| .. -..|..|..... ..+-.....-.|..||..+-.
T Consensus 9 ~~~~~~~~~C~~C~~~I~~~~~v~a~~~~wH-~~--CF~C~~C~~~L~--~~~~~~~g~~yC~~~y~~~fg 74 (80)
T 2dj7_A 9 PIKIRGPSHCAGCKEEIKHGQSLLALDKQWH-VS--CFKCQTCSVILT--GEYISKDGVPYCESDYHAQFG 74 (80)
T ss_dssp CCCCSSCSCCTTTCCCCSSSCCEEETTEEEC-TT--TCBCSSSCCBCS--SCCEEETTEEECTTHHHHHTT
T ss_pred CcCCCCCCCCcCcCCeeCCCeEEEECCcccc-cc--cCCcCcCCCCcC--CCeEEECCEEECHHHHHHHcC
Confidence 4455567789999987641 122222 11 134455543211 112223456799999987643
No 187
>1x4l_A Skeletal muscle LIM-protein 3; LIM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=36.82 E-value=39 Score=20.34 Aligned_cols=14 Identities=21% Similarity=0.759 Sum_probs=9.8
Q ss_pred CceeeChhhHHHHh
Q psy509 73 KEVRVCEDCHEKFT 86 (158)
Q Consensus 73 ~~~RVC~~C~~~l~ 86 (158)
...-.|..||..+.
T Consensus 54 ~g~~yC~~c~~~~~ 67 (72)
T 1x4l_A 54 RDDILCPDCGKDIS 67 (72)
T ss_dssp SSSEECHHHHHTCC
T ss_pred CCEEEChhHcCccc
Confidence 34567999997654
No 188
>1k81_A EIF-2-beta, probable translation initiation factor 2 beta subunit; zinc ribbon; NMR {Methanocaldococcus jannaschii} SCOP: g.59.1.1
Probab=36.52 E-value=9.8 Score=21.04 Aligned_cols=24 Identities=25% Similarity=0.757 Sum_probs=15.5
Q ss_pred CccccCccccccccc-----cccccccce
Q psy509 31 TCHRCRTTFSLVQRK-----HHCRACGQV 54 (158)
Q Consensus 31 ~C~~C~~~F~~~~Rk-----hhCr~CG~v 54 (158)
.|..|+.+-+.+.++ ..|..||..
T Consensus 2 lC~~C~~peT~l~~~~~~~~l~C~aCG~~ 30 (36)
T 1k81_A 2 ICRECGKPDTKIIKEGRVHLLKCMACGAI 30 (36)
T ss_dssp CCSSSCSCEEEEEEETTEEEEEEETTTEE
T ss_pred CCcCCCCCCcEEEEeCCcEEEEhhcCCCc
Confidence 477888877755443 457777754
No 189
>1e8j_A Rubredoxin; iron-sulfur-protein, zinc-substitution, thermostability; NMR {Desulfovibrio gigas} SCOP: g.41.5.1 PDB: 1rdg_A 2dsx_A 1spw_A
Probab=35.79 E-value=10 Score=22.73 Aligned_cols=13 Identities=23% Similarity=0.544 Sum_probs=10.4
Q ss_pred cccccccccceec
Q psy509 44 RKHHCRACGQVFC 56 (158)
Q Consensus 44 RkhhCr~CG~vfC 56 (158)
+++.|+.||.|+=
T Consensus 2 ~~y~C~~CGyvYd 14 (52)
T 1e8j_A 2 DIYVCTVCGYEYD 14 (52)
T ss_dssp CCEECSSSCCCCC
T ss_pred CcEEeCCCCeEEc
Confidence 4688999998863
No 190
>4a17_Y RPL37A, 60S ribosomal protein L32; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_Y 4a1c_Y 4a1e_Y
Probab=35.73 E-value=11 Score=25.95 Aligned_cols=10 Identities=20% Similarity=0.697 Sum_probs=4.4
Q ss_pred eeChhhHHHH
Q psy509 76 RVCEDCHEKF 85 (158)
Q Consensus 76 RVC~~C~~~l 85 (158)
..|..|-..+
T Consensus 55 W~C~kCg~~~ 64 (103)
T 4a17_Y 55 WKCKPCKKII 64 (103)
T ss_dssp EEETTTTEEE
T ss_pred EEcCCCCCEE
Confidence 3444444433
No 191
>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=35.64 E-value=13 Score=18.53 Aligned_cols=12 Identities=25% Similarity=0.631 Sum_probs=8.7
Q ss_pred ccccccccccee
Q psy509 44 RKHHCRACGQVF 55 (158)
Q Consensus 44 RkhhCr~CG~vf 55 (158)
+.+-|..||+.|
T Consensus 8 k~~~C~~C~k~f 19 (36)
T 2elv_A 8 LLYDCHICERKF 19 (36)
T ss_dssp CCEECSSSCCEE
T ss_pred CCeECCCCCCcc
Confidence 456788888776
No 192
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=35.62 E-value=13 Score=18.46 Aligned_cols=12 Identities=17% Similarity=0.512 Sum_probs=8.9
Q ss_pred ccccccccccee
Q psy509 44 RKHHCRACGQVF 55 (158)
Q Consensus 44 RkhhCr~CG~vf 55 (158)
+.+.|..||+.|
T Consensus 8 k~~~C~~C~k~f 19 (36)
T 2elt_A 8 KPYKCPQCSYAS 19 (36)
T ss_dssp CSEECSSSSCEE
T ss_pred CCCCCCCCCccc
Confidence 457788888877
No 193
>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=35.54 E-value=10 Score=19.15 Aligned_cols=12 Identities=33% Similarity=0.869 Sum_probs=8.8
Q ss_pred ccccccccccee
Q psy509 44 RKHHCRACGQVF 55 (158)
Q Consensus 44 RkhhCr~CG~vf 55 (158)
+.+.|..||+.|
T Consensus 8 k~~~C~~C~k~f 19 (37)
T 2elo_A 8 RSYSCPVCEKSF 19 (37)
T ss_dssp CCCEETTTTEEC
T ss_pred CCcCCCCCCCcc
Confidence 556788888776
No 194
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=35.43 E-value=13 Score=18.36 Aligned_cols=13 Identities=38% Similarity=0.802 Sum_probs=9.2
Q ss_pred cccccccccceec
Q psy509 44 RKHHCRACGQVFC 56 (158)
Q Consensus 44 RkhhCr~CG~vfC 56 (158)
+.+-|..||+.|-
T Consensus 6 k~~~C~~C~k~f~ 18 (35)
T 1srk_A 6 RPFVCRICLSAFT 18 (35)
T ss_dssp SCEECSSSCCEES
T ss_pred cCeeCCCCCcccC
Confidence 4567888888773
No 195
>2v3b_B Rubredoxin 2, rubredoxin; alkane degradation, iron-sulfur protein, oxidoreductase, ELE transfer, electron transport, FAD, NAD, iron; HET: FAD; 2.45A {Pseudomonas aeruginosa}
Probab=35.25 E-value=11 Score=22.81 Aligned_cols=14 Identities=36% Similarity=0.954 Sum_probs=11.2
Q ss_pred cccccccccceecC
Q psy509 44 RKHHCRACGQVFCQ 57 (158)
Q Consensus 44 RkhhCr~CG~vfC~ 57 (158)
+++.|+.||.|+=.
T Consensus 2 ~~y~C~~CGyvYd~ 15 (55)
T 2v3b_B 2 RKWQCVVCGFIYDE 15 (55)
T ss_dssp CEEEETTTCCEEET
T ss_pred CcEEeCCCCeEECC
Confidence 46889999998744
No 196
>1dl6_A Transcription factor II B (TFIIB); zinc ribbon, gene regulation; NMR {Homo sapiens} SCOP: g.41.3.1 PDB: 1rly_A 1ro4_A
Probab=35.17 E-value=36 Score=20.58 Aligned_cols=7 Identities=29% Similarity=0.525 Sum_probs=3.9
Q ss_pred CccccCc
Q psy509 31 TCHRCRT 37 (158)
Q Consensus 31 ~C~~C~~ 37 (158)
.|..|+.
T Consensus 13 ~Cp~C~~ 19 (58)
T 1dl6_A 13 TCPNHPD 19 (58)
T ss_dssp SBTTBSS
T ss_pred cCcCCCC
Confidence 5666643
No 197
>2ecg_A Baculoviral IAP repeat-containing protein 4; BIRC4, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=34.67 E-value=10 Score=23.62 Aligned_cols=42 Identities=24% Similarity=0.582 Sum_probs=27.9
Q ss_pred CCCccccCccccccccccccccccce-ecCCCCCCccccCCCCCCCceeeChhhHHHHh
Q psy509 29 GDTCHRCRTTFSLVQRKHHCRACGQV-FCQLCSSKSTSLPKFGIEKEVRVCEDCHEKFT 86 (158)
Q Consensus 29 ~~~C~~C~~~F~~~~RkhhCr~CG~v-fC~~Cs~~~~~lp~~~~~~~~RVC~~C~~~l~ 86 (158)
...|.+|...|.-. .--.||+. ||..|... .+.|..|...+.
T Consensus 25 ~~~C~IC~~~~~~~----~~~pCgH~~~C~~C~~~------------~~~CP~Cr~~i~ 67 (75)
T 2ecg_A 25 EKLCKICMDRNIAI----VFVPCGHLVTCKQCAEA------------VDKCPMCYTVIT 67 (75)
T ss_dssp HHSCSSSCSSCCCB----CCSSSCCCCBCHHHHHH------------CSBCTTTCCBCC
T ss_pred CCCCCcCCCCCCCE----EEecCCCHHHHHHHhhC------------CCCCccCCceec
Confidence 35799998876422 22479999 99999732 256666665543
No 198
>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A
Probab=34.09 E-value=11 Score=20.80 Aligned_cols=13 Identities=38% Similarity=0.927 Sum_probs=9.1
Q ss_pred cccccccccccee
Q psy509 43 QRKHHCRACGQVF 55 (158)
Q Consensus 43 ~RkhhCr~CG~vf 55 (158)
.-|.|||.|.+-+
T Consensus 7 kikqhcrfckkky 19 (37)
T 2elu_A 7 GIKQHCRFCKKKY 19 (37)
T ss_dssp CCCCEETTTTEEC
T ss_pred HHHHHHHHHHHHH
Confidence 3478999887643
No 199
>4a18_A RPL37, ribosomal protein L37; ribosome, eukaryotic initiation factor 6, EIF6, transla large ribosomal subunit, rRNA; 3.52A {Tetrahymena thermophila} PDB: 4a19_A 4a1b_A 4a1d_A
Probab=34.05 E-value=15 Score=24.90 Aligned_cols=7 Identities=57% Similarity=1.678 Sum_probs=3.7
Q ss_pred cccccce
Q psy509 48 CRACGQV 54 (158)
Q Consensus 48 Cr~CG~v 54 (158)
||.||..
T Consensus 19 CrRCG~~ 25 (94)
T 4a18_A 19 CRRCGKA 25 (94)
T ss_dssp CTTTCSE
T ss_pred ecCcCch
Confidence 5555544
No 200
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1
Probab=33.98 E-value=12 Score=18.59 Aligned_cols=10 Identities=30% Similarity=0.869 Sum_probs=6.4
Q ss_pred ccccccccee
Q psy509 46 HHCRACGQVF 55 (158)
Q Consensus 46 hhCr~CG~vf 55 (158)
+.|..||..|
T Consensus 3 ~~C~~C~k~F 12 (33)
T 1rim_A 3 FACPECPKRF 12 (33)
T ss_dssp CCCSSSCCCC
T ss_pred ccCCCCCchh
Confidence 5566677665
No 201
>1vq8_1 50S ribosomal protein L37E; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: g.41.8.2 PDB: 1vq4_1* 1vq5_1* 1vq6_1* 1vq7_1* 1s72_1* 1vq9_1* 1vqk_1* 1vql_1* 1vqm_1* 1vqn_1* 1vqo_1* 1vqp_1* 1yhq_1* 1yi2_1* 1yij_1* 1yit_1* 1yj9_1* 1yjn_1* 1yjw_1* 2otj_1* ...
Probab=33.72 E-value=13 Score=22.90 Aligned_cols=7 Identities=57% Similarity=1.602 Sum_probs=4.0
Q ss_pred cccccce
Q psy509 48 CRACGQV 54 (158)
Q Consensus 48 Cr~CG~v 54 (158)
||.||..
T Consensus 20 CrRCG~~ 26 (57)
T 1vq8_1 20 CRRCGEK 26 (57)
T ss_dssp CTTTCSE
T ss_pred ccccCCh
Confidence 6666654
No 202
>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=33.44 E-value=18 Score=22.52 Aligned_cols=11 Identities=36% Similarity=0.609 Sum_probs=9.3
Q ss_pred CCccccCcccc
Q psy509 30 DTCHRCRTTFS 40 (158)
Q Consensus 30 ~~C~~C~~~F~ 40 (158)
..|..|++.|.
T Consensus 26 ~~C~~C~k~f~ 36 (95)
T 2ej4_A 26 RPKKSCDRTFS 36 (95)
T ss_dssp SSCCCCCCCCS
T ss_pred CcccccccccC
Confidence 36999999996
No 203
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=33.36 E-value=15 Score=18.48 Aligned_cols=12 Identities=33% Similarity=0.747 Sum_probs=9.0
Q ss_pred ccccccccccee
Q psy509 44 RKHHCRACGQVF 55 (158)
Q Consensus 44 RkhhCr~CG~vf 55 (158)
+.+.|..||+.|
T Consensus 8 k~~~C~~C~k~f 19 (37)
T 2elp_A 8 RAMKCPYCDFYF 19 (37)
T ss_dssp CCEECSSSSCEE
T ss_pred CCeECCCCChhh
Confidence 456788888877
No 204
>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}
Probab=33.28 E-value=10 Score=18.78 Aligned_cols=11 Identities=36% Similarity=0.836 Sum_probs=6.7
Q ss_pred cccccccceec
Q psy509 46 HHCRACGQVFC 56 (158)
Q Consensus 46 hhCr~CG~vfC 56 (158)
+.|..||+.|-
T Consensus 3 ~~C~~C~k~f~ 13 (32)
T 2kfq_A 3 FACPACPKRFM 13 (32)
T ss_dssp SSSSSSCTTHH
T ss_pred CCCCCCCcccC
Confidence 45666766653
No 205
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=33.12 E-value=15 Score=18.31 Aligned_cols=12 Identities=17% Similarity=0.545 Sum_probs=8.8
Q ss_pred ccccccccccee
Q psy509 44 RKHHCRACGQVF 55 (158)
Q Consensus 44 RkhhCr~CG~vf 55 (158)
+.+-|..||+.|
T Consensus 8 k~~~C~~C~k~f 19 (36)
T 2elq_A 8 KPFKCSLCEYAT 19 (36)
T ss_dssp CSEECSSSSCEE
T ss_pred CCccCCCCCchh
Confidence 456788888777
No 206
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}
Probab=39.19 E-value=9.1 Score=17.99 Aligned_cols=12 Identities=25% Similarity=0.597 Sum_probs=7.8
Q ss_pred ccccccccceec
Q psy509 45 KHHCRACGQVFC 56 (158)
Q Consensus 45 khhCr~CG~vfC 56 (158)
.+.|..||+.|-
T Consensus 3 ~~~C~~C~k~f~ 14 (30)
T 2lvr_A 3 PYVCIHCQRQFA 14 (30)
Confidence 456777777664
No 207
>4rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.20A {Clostridium pasteurianum} SCOP: g.41.5.1 PDB: 5rxn_A 1bfy_A 1fhh_A 1fhm_A 1irn_A 1iro_A 1r0f_A 1r0g_A 1r0h_A 1r0i_A 1r0j_A 1t9q_A 1c09_A 1b2j_A 1b13_A 1smm_A 1smu_A 1smw_A 1be7_A 1t9o_A ...
Probab=32.58 E-value=14 Score=22.45 Aligned_cols=14 Identities=29% Similarity=0.857 Sum_probs=11.1
Q ss_pred cccccccccceecC
Q psy509 44 RKHHCRACGQVFCQ 57 (158)
Q Consensus 44 RkhhCr~CG~vfC~ 57 (158)
+++.|..||.|+=.
T Consensus 2 ~~y~C~vCGyvYd~ 15 (54)
T 4rxn_A 2 KKYTCTVCGYIYDP 15 (54)
T ss_dssp CCEEETTTCCEECT
T ss_pred CceECCCCCeEECC
Confidence 57889999998743
No 208
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=32.41 E-value=15 Score=18.42 Aligned_cols=12 Identities=25% Similarity=0.905 Sum_probs=8.1
Q ss_pred ccccccccccee
Q psy509 44 RKHHCRACGQVF 55 (158)
Q Consensus 44 RkhhCr~CG~vf 55 (158)
+.+-|..||+.|
T Consensus 10 k~~~C~~C~k~f 21 (37)
T 1p7a_A 10 KPFQCPDCDRSF 21 (37)
T ss_dssp SSBCCTTTCCCB
T ss_pred CCccCCCCCccc
Confidence 456677777766
No 209
>2d8v_A Zinc finger FYVE domain-containing protein 19; zfyve19, ZF- B_BOX, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.43.1.1
Probab=32.23 E-value=18 Score=23.04 Aligned_cols=25 Identities=28% Similarity=0.945 Sum_probs=17.4
Q ss_pred ccccCccccccccccccccc-cceecCCCCC
Q psy509 32 CHRCRTTFSLVQRKHHCRAC-GQVFCQLCSS 61 (158)
Q Consensus 32 C~~C~~~F~~~~RkhhCr~C-G~vfC~~Cs~ 61 (158)
|.+|...= ...|..| |.+||..|-.
T Consensus 11 C~ICneDA-----tlrC~gCdgDLYC~rC~r 36 (67)
T 2d8v_A 11 CCICNEDA-----TLRCAGCDGDLYCARCFR 36 (67)
T ss_dssp CTTTCSCC-----CEEETTTTSEEECSSHHH
T ss_pred eEEeCCCC-----eEEecCCCCceehHHHHH
Confidence 77776642 1468888 8888888854
No 210
>2kwq_A Protein MCM10 homolog; DNA replication, DNA binding, zinc motif, zinc ribbon binding protein; NMR {Xenopus laevis}
Probab=32.21 E-value=15 Score=24.78 Aligned_cols=33 Identities=30% Similarity=0.787 Sum_probs=20.8
Q ss_pred CCCCCcccCC----CccccCcccccccc--ccccccccce
Q psy509 21 DTAPEWMDGD----TCHRCRTTFSLVQR--KHHCRACGQV 54 (158)
Q Consensus 21 ~~~p~W~~~~----~C~~C~~~F~~~~R--khhCr~CG~v 54 (158)
..+-.|+++. .|. |+.....+.| .++|++||..
T Consensus 36 ~H~l~~~~a~KRFFkC~-C~~Rt~sl~r~P~~~C~~Cg~~ 74 (92)
T 2kwq_A 36 NHDFHWHNGVKRFFKCP-CGNRTISLDRLPKKHCSTCGLF 74 (92)
T ss_dssp TCCEEEEEEECEEEECT-TSCEEEESSSSCCSCCTTTCSC
T ss_pred CCceEEEeeeEEEEECC-CCCceeEeeeCCCCCCCCCCCC
Confidence 3345566642 685 8766554444 5788888876
No 211
>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=32.01 E-value=10 Score=23.54 Aligned_cols=31 Identities=29% Similarity=0.778 Sum_probs=18.4
Q ss_pred CccccCccccccccccccccccce--ecCCCCC
Q psy509 31 TCHRCRTTFSLVQRKHHCRACGQV--FCQLCSS 61 (158)
Q Consensus 31 ~C~~C~~~F~~~~RkhhCr~CG~v--fC~~Cs~ 61 (158)
.|..|++.|....-..|=..||.. .|..|..
T Consensus 19 ~C~~C~~~~~~~~L~~H~~~c~~~~~~C~~C~~ 51 (75)
T 2d9k_A 19 VCQHCDLELSILKLKEHEDYCGARTELCGNCGR 51 (75)
T ss_dssp ECSSSCCEECHHHHHHHHHHHHHCEEECSSSCC
T ss_pred CCcccChHhhHHHHHHHHhHcCCCceEcccCCC
Confidence 688899988644322222556553 5666654
No 212
>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}
Probab=32.00 E-value=15 Score=20.19 Aligned_cols=14 Identities=21% Similarity=0.721 Sum_probs=10.4
Q ss_pred ccccccccccceec
Q psy509 43 QRKHHCRACGQVFC 56 (158)
Q Consensus 43 ~RkhhCr~CG~vfC 56 (158)
.|.+.|..||+.|-
T Consensus 5 ~kp~~C~~C~k~F~ 18 (48)
T 3iuf_A 5 DKPYACDICGKRYK 18 (48)
T ss_dssp TSCEECTTTCCEES
T ss_pred CcCEECCCcCcccC
Confidence 35677888888883
No 213
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A
Probab=31.96 E-value=26 Score=32.08 Aligned_cols=12 Identities=33% Similarity=0.850 Sum_probs=6.9
Q ss_pred CCccccCccccc
Q psy509 30 DTCHRCRTTFSL 41 (158)
Q Consensus 30 ~~C~~C~~~F~~ 41 (158)
.+|..|+=.|++
T Consensus 134 ~nCt~CGPR~ti 145 (761)
T 3vth_A 134 INCTNCGPRFSI 145 (761)
T ss_dssp CCBTTBBCSGGG
T ss_pred ccCCCCCcchhh
Confidence 456666655554
No 214
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=31.77 E-value=15 Score=26.15 Aligned_cols=10 Identities=40% Similarity=1.089 Sum_probs=1.2
Q ss_pred CccccCcccc
Q psy509 31 TCHRCRTTFS 40 (158)
Q Consensus 31 ~C~~C~~~F~ 40 (158)
.|..|++.|.
T Consensus 23 ~C~~C~~~f~ 32 (190)
T 2i13_A 23 ACPECGKSFS 32 (190)
T ss_dssp --------CC
T ss_pred cCCCCccccC
Confidence 5777777775
No 215
>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}
Probab=31.72 E-value=11 Score=27.14 Aligned_cols=32 Identities=28% Similarity=0.622 Sum_probs=23.3
Q ss_pred CCCccccCccccccccccccccccceecCCCCCCcc
Q psy509 29 GDTCHRCRTTFSLVQRKHHCRACGQVFCQLCSSKST 64 (158)
Q Consensus 29 ~~~C~~C~~~F~~~~RkhhCr~CG~vfC~~Cs~~~~ 64 (158)
.-.|.+|...|.- -..+ .||++||..|...++
T Consensus 18 ~~~C~IC~~~~~~---pv~~-~CgH~fC~~Ci~~~~ 49 (170)
T 3hcs_A 18 KYECPICLMALRE---AVQT-PCGHRFCKACIIKSI 49 (170)
T ss_dssp GGBCTTTCSBCSS---EEEC-TTSCEEEHHHHHHHH
T ss_pred CCCCCCCChhhcC---cEEC-CCCCHHHHHHHHHHH
Confidence 3479999887643 2233 699999999987653
No 216
>1ffk_W Ribosomal protein L37AE; ribosome assembly, RNA-RNA, protein-RNA, protein-protein; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1jj2_Y 1k73_1* 1k8a_1* 1k9m_1* 1kc8_1* 1kd1_1* 1kqs_Y* 1m1k_1* 1m90_1* 1n8r_1* 1nji_1* 1q7y_1* 1q81_1* 1q82_1* 1q86_1* 1qvf_Y 1qvg_Y 1w2b_Y 3cxc_Y*
Probab=31.56 E-value=19 Score=23.24 Aligned_cols=26 Identities=23% Similarity=0.514 Sum_probs=13.8
Q ss_pred CCccccCcccccccc----ccccccccceecC
Q psy509 30 DTCHRCRTTFSLVQR----KHHCRACGQVFCQ 57 (158)
Q Consensus 30 ~~C~~C~~~F~~~~R----khhCr~CG~vfC~ 57 (158)
..|..|++. -+.| --+|+.||..|=+
T Consensus 28 y~C~fCgk~--~vkR~a~GIW~C~~C~~~~AG 57 (73)
T 1ffk_W 28 YKCPVCGFP--KLKRASTSIWVCGHCGYKIAG 57 (73)
T ss_pred ccCCCCCCc--eeEEEEeEEEECCCCCcEEEC
Confidence 357777652 2222 2557777666633
No 217
>3iz5_l 60S ribosomal protein L37 (L37E); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_l 3izc_l 3izs_l 3o58_d 3o5h_d 3u5e_j 3u5i_j 4b6a_j 1s1i_Y 3jyw_Y
Probab=31.39 E-value=27 Score=23.58 Aligned_cols=7 Identities=43% Similarity=1.260 Sum_probs=3.8
Q ss_pred cccccce
Q psy509 48 CRACGQV 54 (158)
Q Consensus 48 Cr~CG~v 54 (158)
||.||..
T Consensus 19 CrRCG~~ 25 (94)
T 3iz5_l 19 CVRCGRR 25 (94)
T ss_dssp CTTTCSE
T ss_pred ecCcCch
Confidence 5555554
No 218
>1qxf_A GR2, 30S ribosomal protein S27E; structural genomics, beta sheet, PSI, protein structure initiative; NMR {Archaeoglobus fulgidus} SCOP: g.41.8.4
Probab=31.34 E-value=22 Score=22.54 Aligned_cols=27 Identities=22% Similarity=0.639 Sum_probs=13.4
Q ss_pred CccccCc---cccccccccccccccceecC
Q psy509 31 TCHRCRT---TFSLVQRKHHCRACGQVFCQ 57 (158)
Q Consensus 31 ~C~~C~~---~F~~~~RkhhCr~CG~vfC~ 57 (158)
.|..|.. .|+--.....|..||.++|.
T Consensus 9 KCp~C~niq~VFShA~tvV~C~~Cg~~L~~ 38 (66)
T 1qxf_A 9 KCPDCEHEQVIFDHPSTIVKCIICGRTVAE 38 (66)
T ss_dssp ECTTTCCEEEEESSCSSCEECSSSCCEEEE
T ss_pred ECCCCCCceEEEecCceEEEcccCCCEEee
Confidence 3555543 34444444555555555543
No 219
>3k1f_M Transcription initiation factor IIB; RNA polymerase II, TFIIB, transcription factor, DNA-binding, DNA-directed RNA polymerase; 4.30A {Saccharomyces cerevisiae}
Probab=31.22 E-value=21 Score=27.21 Aligned_cols=34 Identities=24% Similarity=0.470 Sum_probs=17.2
Q ss_pred CCCCcccC----CCccccCcc---c--ccccccccccccccee
Q psy509 22 TAPEWMDG----DTCHRCRTT---F--SLVQRKHHCRACGQVF 55 (158)
Q Consensus 22 ~~p~W~~~----~~C~~C~~~---F--~~~~RkhhCr~CG~vf 55 (158)
.++.|.++ ..|..|+.. + ..-+.-..|..||.|+
T Consensus 10 ~~~~~~~~ln~~~~CPECGs~~t~IV~D~erGE~VCsdCGLVL 52 (197)
T 3k1f_M 10 RAGRRGPNLNIVLTCPECKVYPPKIVERFSEGDVVCALCGLVL 52 (197)
T ss_dssp ---CCSSCCCCCCCCTTTCCSSCCEEEEGGGTEEEETTTCBBC
T ss_pred CccccccccccCeECcCCCCcCCeEEEeCCCCEEEEcCCCCCc
Confidence 45567753 369999872 2 1224445555555554
No 220
>1ovx_A ATP-dependent CLP protease ATP-binding subunit CL; treble CLEF zinc finger, homodimer, metal binding protein; NMR {Escherichia coli} SCOP: g.39.1.11
Probab=31.19 E-value=20 Score=22.78 Aligned_cols=18 Identities=22% Similarity=0.691 Sum_probs=13.2
Q ss_pred ceeeChhhHHHHhcccCC
Q psy509 74 EVRVCEDCHEKFTNYYRS 91 (158)
Q Consensus 74 ~~RVC~~C~~~l~~~~~~ 91 (158)
.+-+|+.|.......+..
T Consensus 39 gvyICdeCI~~c~~Il~e 56 (67)
T 1ovx_A 39 SVYICDECVDLCNDIIRE 56 (67)
T ss_dssp SCEEEHHHHHHHHHHHC-
T ss_pred CCChhHHHHHHHHHHHHH
Confidence 378999999887765533
No 221
>3j21_e 50S ribosomal protein L37E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=30.34 E-value=19 Score=22.59 Aligned_cols=7 Identities=71% Similarity=1.834 Sum_probs=3.7
Q ss_pred cccccce
Q psy509 48 CRACGQV 54 (158)
Q Consensus 48 Cr~CG~v 54 (158)
||.||..
T Consensus 20 CrRCG~~ 26 (62)
T 3j21_e 20 CRRCGRV 26 (62)
T ss_dssp CSSSCSB
T ss_pred ecccCcc
Confidence 5555544
No 222
>2d8x_A Protein pinch; LIM domain, pinch protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=30.27 E-value=88 Score=18.53 Aligned_cols=15 Identities=20% Similarity=0.609 Sum_probs=11.6
Q ss_pred CceeeChhhHHHHhc
Q psy509 73 KEVRVCEDCHEKFTN 87 (158)
Q Consensus 73 ~~~RVC~~C~~~l~~ 87 (158)
...-.|..||..+..
T Consensus 50 ~g~~yC~~c~~~~~~ 64 (70)
T 2d8x_A 50 AGRHLCRPCHNREKA 64 (70)
T ss_dssp TTEEECHHHHHHHHC
T ss_pred CCeEECHHHhhhhcC
Confidence 446789999988765
No 223
>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=30.24 E-value=18 Score=18.41 Aligned_cols=13 Identities=15% Similarity=0.225 Sum_probs=9.2
Q ss_pred cccccccccceec
Q psy509 44 RKHHCRACGQVFC 56 (158)
Q Consensus 44 RkhhCr~CG~vfC 56 (158)
+.+.|..||+.|-
T Consensus 8 k~~~C~~C~k~f~ 20 (37)
T 2elm_A 8 HLYYCSQCHYSSI 20 (37)
T ss_dssp CEEECSSSSCEEE
T ss_pred cCeECCCCCcccC
Confidence 4567888888773
No 224
>2jun_A Midline-1; B-BOX, TRIM, ring finger, alternative splicing, coiled coil, cytoplasm, cytoskeleton, disease mutation, ligase, metal-binding; NMR {Homo sapiens}
Probab=30.22 E-value=13 Score=24.36 Aligned_cols=32 Identities=19% Similarity=0.532 Sum_probs=21.7
Q ss_pred CCccccCccccccccccccccccceecCCCCCC
Q psy509 30 DTCHRCRTTFSLVQRKHHCRACGQVFCQLCSSK 62 (158)
Q Consensus 30 ~~C~~C~~~F~~~~RkhhCr~CG~vfC~~Cs~~ 62 (158)
-.|..|...| +..--..|-.||..||..|...
T Consensus 4 ~~C~~C~~~~-~~~av~~C~~C~~~~C~~Cl~~ 35 (101)
T 2jun_A 4 VLCQFCDQDP-AQDAVKTCVTCEVSYCDECLKA 35 (101)
T ss_dssp CBCTTCCSSS-CCBCCEEETTTTEEECHHHHHH
T ss_pred CCCcCCCCCC-CCCceEECCcCChHHhHHHCHH
Confidence 3688887543 1223456889999999988763
No 225
>3j20_W 30S ribosomal protein S27E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=30.13 E-value=24 Score=22.15 Aligned_cols=27 Identities=30% Similarity=0.705 Sum_probs=17.9
Q ss_pred CccccCc---cccccccccccccccceecC
Q psy509 31 TCHRCRT---TFSLVQRKHHCRACGQVFCQ 57 (158)
Q Consensus 31 ~C~~C~~---~F~~~~RkhhCr~CG~vfC~ 57 (158)
.|..|.. .|+--.....|..||.++|.
T Consensus 17 kCp~C~~~q~VFSha~t~V~C~~Cgt~L~~ 46 (63)
T 3j20_W 17 KCIDCGNEQIVFSHPATKVRCLICGATLVE 46 (63)
T ss_dssp ECSSSCCEEEEESSCSSCEECSSSCCEEEE
T ss_pred ECCCCCCeeEEEecCCeEEEccCcCCEEec
Confidence 5777754 55555566677777777764
No 226
>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}
Probab=30.01 E-value=39 Score=19.70 Aligned_cols=12 Identities=25% Similarity=0.764 Sum_probs=9.0
Q ss_pred CCCccc--cCcccc
Q psy509 29 GDTCHR--CRTTFS 40 (158)
Q Consensus 29 ~~~C~~--C~~~F~ 40 (158)
...|.. |++.|.
T Consensus 17 ~~~C~~~~C~k~f~ 30 (72)
T 2epa_A 17 SHICSHPGCGKTYF 30 (72)
T ss_dssp CEECSSTTTCCEES
T ss_pred ceeCCCCCCccccC
Confidence 346876 999886
No 227
>2lk0_A RNA-binding protein 5; zinc finger; NMR {Homo sapiens} PDB: 2lk1_A*
Probab=29.61 E-value=20 Score=19.09 Aligned_cols=20 Identities=25% Similarity=0.876 Sum_probs=14.1
Q ss_pred ccccCccccccccccccccccc
Q psy509 32 CHRCRTTFSLVQRKHHCRACGQ 53 (158)
Q Consensus 32 C~~C~~~F~~~~RkhhCr~CG~ 53 (158)
|..|+. .-|.|+..|-.||.
T Consensus 8 C~~C~~--~Nfa~r~~C~~C~~ 27 (32)
T 2lk0_A 8 CNKCCL--NNFRKRLKCFRCGA 27 (32)
T ss_dssp CTTTCC--EEETTCCBCTTTCC
T ss_pred cCcCcC--CcChhcceecCCCC
Confidence 555643 45778888888875
No 228
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A
Probab=28.77 E-value=19 Score=18.37 Aligned_cols=12 Identities=33% Similarity=0.786 Sum_probs=8.8
Q ss_pred ccccccccccee
Q psy509 44 RKHHCRACGQVF 55 (158)
Q Consensus 44 RkhhCr~CG~vf 55 (158)
+.+.|..||+.|
T Consensus 5 k~~~C~~C~k~f 16 (39)
T 1njq_A 5 RSYTCSFCKREF 16 (39)
T ss_dssp SSEECTTTCCEE
T ss_pred CceECCCCCccc
Confidence 456788888877
No 229
>2e5r_A Dystrobrevin alpha; ZZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=28.68 E-value=25 Score=21.65 Aligned_cols=22 Identities=23% Similarity=0.703 Sum_probs=13.8
Q ss_pred CCccccCcccccccccccccccc
Q psy509 30 DTCHRCRTTFSLVQRKHHCRACG 52 (158)
Q Consensus 30 ~~C~~C~~~F~~~~RkhhCr~CG 52 (158)
-.|..|++. .+...|++|..|.
T Consensus 12 ~~Cd~C~~~-pi~G~RykC~~C~ 33 (63)
T 2e5r_A 12 VECSYCHSE-SMMGFRYRCQQCH 33 (63)
T ss_dssp SCCSSSCCC-SSCSCEEEESSCS
T ss_pred CCCcCCCCc-ceecceEEecCCC
Confidence 568888763 2345667777774
No 230
>2yrk_A Zinc finger homeobox protein 4; structure genomics, ZF-C2H2 domain, ZFH-4, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.37.1.4
Probab=27.89 E-value=18 Score=22.10 Aligned_cols=12 Identities=25% Similarity=0.695 Sum_probs=10.0
Q ss_pred CCCccccCcccc
Q psy509 29 GDTCHRCRTTFS 40 (158)
Q Consensus 29 ~~~C~~C~~~F~ 40 (158)
...|..|+.+|+
T Consensus 13 ~~eC~lC~vkYs 24 (55)
T 2yrk_A 13 KPECTLCGVKYS 24 (55)
T ss_dssp CSCCTTTTCCCC
T ss_pred CccccccCcccc
Confidence 468999999886
No 231
>2dkt_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.89.1.1 g.93.1.1 PDB: 2k2c_A
Probab=27.87 E-value=37 Score=24.68 Aligned_cols=32 Identities=19% Similarity=0.696 Sum_probs=16.9
Q ss_pred cccCCCccccCccccccccccccccccce----ecCCCC
Q psy509 26 WMDGDTCHRCRTTFSLVQRKHHCRACGQV----FCQLCS 60 (158)
Q Consensus 26 W~~~~~C~~C~~~F~~~~RkhhCr~CG~v----fC~~Cs 60 (158)
++..-.|..|++.+.+- ..|.+||.. ||..|-
T Consensus 55 ~~~~vlCg~C~~~q~~~---~~C~~Cg~~f~~Y~C~~C~ 90 (143)
T 2dkt_A 55 KVKEVQCINCEKLQHAQ---QTCEDCSTLFGEYYCSICH 90 (143)
T ss_dssp SCCCEEESSSCCEECSC---SBCSSSCCBSCSEECSSSC
T ss_pred ccceeeecccCcccccc---CcCCCCCccceeeEeceee
Confidence 33344566666655443 256666643 566663
No 232
>2l3k_A Rhombotin-2, linker, LIM domain-binding protein 1; LMO2(LIM2)-LDB1(LID), chimera, fusion protein, oncoprotein; NMR {Mus musculus} PDB: 2l6y_B 2l6z_C
Probab=27.85 E-value=49 Score=22.41 Aligned_cols=15 Identities=27% Similarity=0.337 Sum_probs=11.3
Q ss_pred CceeeChhhHHHHhc
Q psy509 73 KEVRVCEDCHEKFTN 87 (158)
Q Consensus 73 ~~~RVC~~C~~~l~~ 87 (158)
...-.|..||..+..
T Consensus 56 ~g~~yC~~cy~~~~~ 70 (123)
T 2l3k_A 56 NSDIVCEQDIYEWTK 70 (123)
T ss_dssp SSSEEEGGGHHHHHH
T ss_pred CCEEEcHHHhHHHhc
Confidence 345689999988764
No 233
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.72 E-value=21 Score=18.87 Aligned_cols=13 Identities=31% Similarity=1.037 Sum_probs=9.5
Q ss_pred cccccccccccee
Q psy509 43 QRKHHCRACGQVF 55 (158)
Q Consensus 43 ~RkhhCr~CG~vf 55 (158)
.+.+.|..||+.|
T Consensus 10 ~k~~~C~~C~k~F 22 (44)
T 2epv_A 10 EKPYECNECGKAF 22 (44)
T ss_dssp CCSEECSSSCCEE
T ss_pred CcCeECCCCCccc
Confidence 3557788888877
No 234
>2yho_A E3 ubiquitin-protein ligase mylip; ligase, E2 ligase-E3 ligase complex, ring zinc-finger, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 2yhn_A
Probab=27.66 E-value=12 Score=23.80 Aligned_cols=44 Identities=18% Similarity=0.516 Sum_probs=29.9
Q ss_pred CCCccccCccccccccccccccccce-ecCCCCCCccccCCCCCCCceeeChhhHHHHhcc
Q psy509 29 GDTCHRCRTTFSLVQRKHHCRACGQV-FCQLCSSKSTSLPKFGIEKEVRVCEDCHEKFTNY 88 (158)
Q Consensus 29 ~~~C~~C~~~F~~~~RkhhCr~CG~v-fC~~Cs~~~~~lp~~~~~~~~RVC~~C~~~l~~~ 88 (158)
...|.+|...+.- .---.||++ ||..|.... +.|..|...+...
T Consensus 18 ~~~C~IC~~~~~~----~v~~pCgH~~~C~~C~~~~------------~~CP~Cr~~i~~~ 62 (79)
T 2yho_A 18 AMLCMVCCEEEIN----STFCPCGHTVCCESCAAQL------------QSCPVCRSRVEHV 62 (79)
T ss_dssp HTBCTTTSSSBCC----EEEETTCBCCBCHHHHTTC------------SBCTTTCCBCCEE
T ss_pred CCEeEEeCcccCc----EEEECCCCHHHHHHHHHhc------------CcCCCCCchhhCe
Confidence 4579999876642 122479999 999998653 2777777766553
No 235
>3vk6_A E3 ubiquitin-protein ligase hakai; HYB, phosphotyrosine binding domain; 1.90A {Mus musculus}
Probab=27.64 E-value=13 Score=25.62 Aligned_cols=49 Identities=22% Similarity=0.611 Sum_probs=34.3
Q ss_pred CCccccCccccccccccccccccceecCCCCCCccccCCCCCCCceeeChhhHHHHhcc
Q psy509 30 DTCHRCRTTFSLVQRKHHCRACGQVFCQLCSSKSTSLPKFGIEKEVRVCEDCHEKFTNY 88 (158)
Q Consensus 30 ~~C~~C~~~F~~~~RkhhCr~CG~vfC~~Cs~~~~~lp~~~~~~~~RVC~~C~~~l~~~ 88 (158)
.-|..|+.+|....|-- .|+++||..|...+. .+....|..|.+.+++.
T Consensus 2 hfC~~C~~Pi~iygRmI---PCkHvFCydCa~~~~-------~~~~k~Cp~C~~~V~rV 50 (101)
T 3vk6_A 2 HFCDKCGLPIKVYGRMI---PCKHVFCYDCAILHE-------KKGDKMCPGCSDPVQRI 50 (101)
T ss_dssp CBCTTTCSBCSEEEEEE---TTCCEEEHHHHHHHH-------HTTCCBCTTTCCBCSEE
T ss_pred eecCccCCCeEEEeeec---cccccHHHHHHHHHH-------hccCCCCcCcCCeeeee
Confidence 35889999998877765 456699999985431 12346777787776653
No 236
>2xoc_A E3 ubiquitin-protein ligase CHFR; zinc-binding, poly(ADP-ribose) mitosis, antephase checkpoint, cell cycle; HET: PGE ADP ADE; 1.89A {Homo sapiens} PDB: 2xoy_A* 2xoz_A* 2xp0_A
Probab=27.35 E-value=22 Score=28.42 Aligned_cols=26 Identities=27% Similarity=0.632 Sum_probs=22.1
Q ss_pred CccccCcccccc---------ccccccccccceec
Q psy509 31 TCHRCRTTFSLV---------QRKHHCRACGQVFC 56 (158)
Q Consensus 31 ~C~~C~~~F~~~---------~RkhhCr~CG~vfC 56 (158)
.|..|...|-.. .+..+|-.|.+.||
T Consensus 81 ~C~~C~~~MP~R~~~~~~~~~~~pq~C~iC~r~FC 115 (261)
T 2xoc_A 81 LCTCCFQPMPDRRVEREQDPRVAPQQCAVCLQPFC 115 (261)
T ss_dssp ECTTTCCEEECCHHHHHTCTTSCCCBCTTTCCBCC
T ss_pred CcCcccCcCCCCCccccccCCCCCCCCCCcCcccc
Confidence 689999988664 55889999999999
No 237
>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}
Probab=27.21 E-value=13 Score=24.89 Aligned_cols=15 Identities=20% Similarity=0.534 Sum_probs=12.8
Q ss_pred CCCccccCccccccc
Q psy509 29 GDTCHRCRTTFSLVQ 43 (158)
Q Consensus 29 ~~~C~~C~~~F~~~~ 43 (158)
.-.|..|+++|..+.
T Consensus 21 ~iiClecGK~fK~Lk 35 (87)
T 2jsp_A 21 HIVCLECGGSFKSLK 35 (87)
T ss_dssp CEECTBTCCEESBHH
T ss_pred ceEecccchhhHHHH
Confidence 348999999999877
No 238
>2xzm_6 RPS27E; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_6
Probab=26.99 E-value=28 Score=22.90 Aligned_cols=27 Identities=30% Similarity=0.876 Sum_probs=18.3
Q ss_pred CccccCc---cccccccccccccccceecC
Q psy509 31 TCHRCRT---TFSLVQRKHHCRACGQVFCQ 57 (158)
Q Consensus 31 ~C~~C~~---~F~~~~RkhhCr~CG~vfC~ 57 (158)
.|..|.. .|+--..-..|..||.++|.
T Consensus 34 kCp~C~n~q~VFShA~t~V~C~~Cg~~L~~ 63 (81)
T 2xzm_6 34 KCAQCQNIQMIFSNAQSTIICEKCSAILCK 63 (81)
T ss_dssp ECSSSCCEEEEETTCSSCEECSSSCCEEEE
T ss_pred ECCCCCCeeEEEecCccEEEccCCCCEEee
Confidence 5777764 56655566778888877765
No 239
>2hf1_A Tetraacyldisaccharide-1-P 4-kinase; LPXK, lipid A biosynthes structural genomics, PSI-2, protein structure initiative; 1.90A {Chromobacterium violaceum} SCOP: b.171.1.1
Probab=26.95 E-value=25 Score=22.21 Aligned_cols=14 Identities=14% Similarity=0.311 Sum_probs=9.5
Q ss_pred CCCccccCcccccc
Q psy509 29 GDTCHRCRTTFSLV 42 (158)
Q Consensus 29 ~~~C~~C~~~F~~~ 42 (158)
.-.|..|+.+..+-
T Consensus 8 iL~CP~ck~~L~~~ 21 (68)
T 2hf1_A 8 ILVCPLCKGPLVFD 21 (68)
T ss_dssp ECBCTTTCCBCEEE
T ss_pred heECCCCCCcCeEe
Confidence 34788888876543
No 240
>2k1p_A Zinc finger RAN-binding domain-containing protein 2; ZNF265, RNA binding, ranbp2, RBZ, ZIS, alternative splicing, metal-binding, mRNA processing; NMR {Homo sapiens} PDB: 3g9y_A
Probab=26.88 E-value=33 Score=18.36 Aligned_cols=21 Identities=24% Similarity=0.754 Sum_probs=14.5
Q ss_pred CccccCccccccccccccccccc
Q psy509 31 TCHRCRTTFSLVQRKHHCRACGQ 53 (158)
Q Consensus 31 ~C~~C~~~F~~~~RkhhCr~CG~ 53 (158)
.|..|+. .-|.|+..|..||.
T Consensus 8 ~C~~C~~--~Nfa~R~~C~~C~~ 28 (33)
T 2k1p_A 8 QCKTCSN--VNWARRSECNMCNT 28 (33)
T ss_dssp BCSSSCC--BCCTTCSBCSSSCC
T ss_pred ccCCCCC--ccccccccccccCC
Confidence 4666653 45778888888875
No 241
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Probab=26.79 E-value=24 Score=22.97 Aligned_cols=7 Identities=29% Similarity=0.790 Sum_probs=3.4
Q ss_pred ccCcccc
Q psy509 34 RCRTTFS 40 (158)
Q Consensus 34 ~C~~~F~ 40 (158)
.|++.|.
T Consensus 12 ~C~~~f~ 18 (124)
T 1ubd_C 12 GCTKMFR 18 (124)
T ss_dssp TCCCEES
T ss_pred CCcCccC
Confidence 4555553
No 242
>2jr6_A UPF0434 protein NMA0874; solution, structural genomics, PSI, structure initiative, northeast structural genomics consort NESG; NMR {Neisseria meningitidis}
Probab=26.72 E-value=25 Score=22.16 Aligned_cols=28 Identities=11% Similarity=0.120 Sum_probs=17.3
Q ss_pred cCCCccccCccccccccccccccccceecCCCCC
Q psy509 28 DGDTCHRCRTTFSLVQRKHHCRACGQVFCQLCSS 61 (158)
Q Consensus 28 ~~~~C~~C~~~F~~~~RkhhCr~CG~vfC~~Cs~ 61 (158)
+.-.|..|+.+..+-. ..|..+|..|..
T Consensus 7 ~iL~CP~ck~~L~~~~------~~~~LiC~~cg~ 34 (68)
T 2jr6_A 7 DILVCPVTKGRLEYHQ------DKQELWSRQAKL 34 (68)
T ss_dssp CCCBCSSSCCBCEEET------TTTEEEETTTTE
T ss_pred hheECCCCCCcCeEeC------CCCEEEcCCCCc
Confidence 3457999988765432 246666666643
No 243
>4bbr_M Transcription initiation factor IIB; RNA polymerase, TFIIB; 3.40A {Saccharomyces cerevisiae} PDB: 3k7a_M 4bbs_M
Probab=26.57 E-value=24 Score=28.85 Aligned_cols=36 Identities=22% Similarity=0.426 Sum_probs=17.8
Q ss_pred CCCCcccC----CCccccCc-c----ccccccccccccccceecC
Q psy509 22 TAPEWMDG----DTCHRCRT-T----FSLVQRKHHCRACGQVFCQ 57 (158)
Q Consensus 22 ~~p~W~~~----~~C~~C~~-~----F~~~~RkhhCr~CG~vfC~ 57 (158)
.++.|.++ ..|..|+. + |..-..-..|..||-|+=.
T Consensus 10 ~~~~~~~~l~~~~~Cp~C~~~~~~lv~D~~~G~~vC~~CGlVl~e 54 (345)
T 4bbr_M 10 RAGRRGPNLNIVLTCPECKVYPPKIVERFSEGDVVCALCGLVLSD 54 (345)
T ss_dssp ------------CCCSSCCCSSCCEEEEGGGTEEEETTTCBEEES
T ss_pred CccccCcccccCCcCCCCCCCCCceeEECCCCcEEeCCCCCCccC
Confidence 45677753 47999985 2 2334556677777777644
No 244
>1dx8_A Rubredoxin; electron transport, zinc-substitution; NMR {Guillardia theta} SCOP: g.41.5.1 PDB: 1h7v_A
Probab=26.51 E-value=20 Score=22.82 Aligned_cols=15 Identities=33% Similarity=0.840 Sum_probs=12.1
Q ss_pred ccccccccccceecC
Q psy509 43 QRKHHCRACGQVFCQ 57 (158)
Q Consensus 43 ~RkhhCr~CG~vfC~ 57 (158)
..++.|+.||.|+=.
T Consensus 5 m~~y~C~vCGyiYd~ 19 (70)
T 1dx8_A 5 EGKYECEACGYIYEP 19 (70)
T ss_dssp SSCEEETTTCCEECT
T ss_pred CceEEeCCCCEEEcC
Confidence 457899999999743
No 245
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=26.48 E-value=12 Score=24.15 Aligned_cols=54 Identities=22% Similarity=0.431 Sum_probs=35.7
Q ss_pred cCCCccccCcccc---ccccccccccccceecCCCCCCccccCCCCCCCceeeChhhHHHHhc
Q psy509 28 DGDTCHRCRTTFS---LVQRKHHCRACGQVFCQLCSSKSTSLPKFGIEKEVRVCEDCHEKFTN 87 (158)
Q Consensus 28 ~~~~C~~C~~~F~---~~~RkhhCr~CG~vfC~~Cs~~~~~lp~~~~~~~~RVC~~C~~~l~~ 87 (158)
+...|.+|...|. .+...=+|+..++.|-..|...|+... ..+.|..|...+.-
T Consensus 14 ~~~~C~IC~~~~~~~~~l~~pC~C~Gs~h~fH~~Cl~~Wl~~~------~~~~CplCr~~~~~ 70 (80)
T 2d8s_A 14 SQDICRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSS------DTRCCELCKYEFIM 70 (80)
T ss_dssp TSCCCSSSCCCCCSSSCEECSSSCCSSSCCEETTHHHHHHHHH------CCSBCSSSCCBCCC
T ss_pred CCCCCeEcCccccCCCeeEeccccCCcCCeeCHHHHHHHHhhC------CCCCCCCCCCeeec
Confidence 3568999988774 222233445556999999999886431 23578888776543
No 246
>2ayj_A 50S ribosomal protein L40E; Zn-binding, beta-strand protein, structural genomics, PSI, protein structure initiative; NMR {Sulfolobus solfataricus} SCOP: g.41.8.7
Probab=26.32 E-value=22 Score=21.78 Aligned_cols=22 Identities=27% Similarity=0.773 Sum_probs=14.7
Q ss_pred CCccccCccccccccccccccccc
Q psy509 30 DTCHRCRTTFSLVQRKHHCRACGQ 53 (158)
Q Consensus 30 ~~C~~C~~~F~~~~RkhhCr~CG~ 53 (158)
..|..|+.... -|-..||.||.
T Consensus 20 ~ICrkC~ARnp--~~A~~CRKCg~ 41 (56)
T 2ayj_A 20 KVCRKCGALNP--IRATKCRRCHS 41 (56)
T ss_dssp EEETTTCCEEC--TTCSSCTTTCC
T ss_pred hhhccccCcCC--cccccccCCCC
Confidence 46777877543 35678888773
No 247
>2zkr_2 60S ribosomal protein L37E; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris} SCOP: i.1.1.1
Probab=26.27 E-value=25 Score=23.93 Aligned_cols=22 Identities=32% Similarity=0.845 Sum_probs=13.2
Q ss_pred CccccCccccccccccccccccc
Q psy509 31 TCHRCRTTFSLVQRKHHCRACGQ 53 (158)
Q Consensus 31 ~C~~C~~~F~~~~RkhhCr~CG~ 53 (158)
.|..|+.. ++-..|++|-.||.
T Consensus 18 lCrRCG~~-sfH~qK~~CgkCGY 39 (97)
T 2zkr_2 18 LCRRCGSK-AYHLQKSTCGKCGY 39 (97)
T ss_dssp CCTTTCSS-CEETTSCCBTTTCT
T ss_pred cCCCCCCc-cCcCccccCcccCC
Confidence 57777764 23345666666665
No 248
>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A
Probab=26.15 E-value=20 Score=16.41 Aligned_cols=10 Identities=40% Similarity=1.105 Sum_probs=6.8
Q ss_pred cccc--ccccee
Q psy509 46 HHCR--ACGQVF 55 (158)
Q Consensus 46 hhCr--~CG~vf 55 (158)
+.|. .||+.|
T Consensus 3 ~~C~~~~C~k~f 14 (29)
T 2ab3_A 3 YVCHFENCGRSF 14 (29)
T ss_dssp EEECSTTTCEEE
T ss_pred CCCcCCcCcCcc
Confidence 4577 777766
No 249
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Probab=26.15 E-value=24 Score=18.13 Aligned_cols=12 Identities=33% Similarity=0.861 Sum_probs=8.7
Q ss_pred ccccccccccee
Q psy509 44 RKHHCRACGQVF 55 (158)
Q Consensus 44 RkhhCr~CG~vf 55 (158)
+.+.|..||+.|
T Consensus 10 ~~~~C~~C~k~f 21 (42)
T 2epc_A 10 TPYLCGQCGKSF 21 (42)
T ss_dssp CCEECSSSCCEE
T ss_pred CCeECCCCCccc
Confidence 456777888777
No 250
>2d8y_A Eplin protein; LIM domain, epithelial protein LOST in neoplasm, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=26.14 E-value=1e+02 Score=19.46 Aligned_cols=55 Identities=20% Similarity=0.419 Sum_probs=28.8
Q ss_pred CCCccccCccccc------cccccccccccceecCCCCCCccccCCCCCCCceeeChhhHHHHhc
Q psy509 29 GDTCHRCRTTFSL------VQRKHHCRACGQVFCQLCSSKSTSLPKFGIEKEVRVCEDCHEKFTN 87 (158)
Q Consensus 29 ~~~C~~C~~~F~~------~~RkhhCr~CG~vfC~~Cs~~~~~lp~~~~~~~~RVC~~C~~~l~~ 87 (158)
...|..|++.... ..+..| ..| ..|..|........ +-.....-.|..||..+..
T Consensus 15 ~~~C~~C~~~I~~~~~v~a~~~~~H-~~C--F~C~~C~~~L~~~~-~~~~~g~~yC~~~y~~~f~ 75 (91)
T 2d8y_A 15 RETCVECQKTVYPMERLLANQQVFH-ISC--FRCSYCNNKLSLGT-YASLHGRIYCKPHFNQLFK 75 (91)
T ss_dssp SCBCTTTCCBCCTTSEEECSSSEEE-TTT--CBCTTTCCBCCTTT-CCCSSSCCCCHHHHHHHSC
T ss_pred CCcCccCCCccCCceeEEECCCEEC-CCC--CeeCCCCCCCCCCC-cEeECCEEECHHHHHHHhC
Confidence 5689999987742 122222 111 23455543322111 2223445679999987754
No 251
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.13 E-value=24 Score=18.70 Aligned_cols=14 Identities=36% Similarity=1.001 Sum_probs=9.8
Q ss_pred ccccccccccceec
Q psy509 43 QRKHHCRACGQVFC 56 (158)
Q Consensus 43 ~RkhhCr~CG~vfC 56 (158)
.+.+.|..||+.|-
T Consensus 10 ~~~~~C~~C~k~F~ 23 (46)
T 2emi_A 10 ERHYECSECGKAFI 23 (46)
T ss_dssp CCCEECSSSCCEES
T ss_pred CCCCCCCCCCcccC
Confidence 35577888888773
No 252
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.11 E-value=23 Score=18.20 Aligned_cols=13 Identities=46% Similarity=1.088 Sum_probs=9.4
Q ss_pred cccccccccccee
Q psy509 43 QRKHHCRACGQVF 55 (158)
Q Consensus 43 ~RkhhCr~CG~vf 55 (158)
.+.+.|..||+.|
T Consensus 8 ~k~~~C~~C~k~f 20 (41)
T 2ept_A 8 QRVYECQECGKSF 20 (41)
T ss_dssp CCCEECSSSCCEE
T ss_pred CCCeECCCCCCCc
Confidence 3556788888877
No 253
>1x61_A Thyroid receptor interacting protein 6; LIM domain, OPA-interacting protein 1, zyxin related protein 1 (ZRP-1), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=26.00 E-value=62 Score=19.33 Aligned_cols=15 Identities=20% Similarity=0.390 Sum_probs=11.2
Q ss_pred CceeeChhhHHHHhc
Q psy509 73 KEVRVCEDCHEKFTN 87 (158)
Q Consensus 73 ~~~RVC~~C~~~l~~ 87 (158)
...-+|..||..+..
T Consensus 52 ~~~~yC~~cy~~~~~ 66 (72)
T 1x61_A 52 ERRAYCEGCYVATLE 66 (72)
T ss_dssp SSCEEEHHHHHHHHH
T ss_pred CCeEECHHHHHHHHc
Confidence 345789999987654
No 254
>3iz6_X 40S ribosomal protein S27 (S27E); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=25.93 E-value=28 Score=23.17 Aligned_cols=27 Identities=37% Similarity=0.801 Sum_probs=18.4
Q ss_pred CccccCc---cccccccccccccccceecC
Q psy509 31 TCHRCRT---TFSLVQRKHHCRACGQVFCQ 57 (158)
Q Consensus 31 ~C~~C~~---~F~~~~RkhhCr~CG~vfC~ 57 (158)
.|..|+. .|+--.....|..||.++|.
T Consensus 38 kCp~C~~~~~VFShA~t~V~C~~CgtvL~~ 67 (86)
T 3iz6_X 38 KCQGCFNITTVFSHSQTVVVCPGCQTVLCQ 67 (86)
T ss_dssp ECTTTCCEEEEETTCSSCCCCSSSCCCCSC
T ss_pred ECCCCCCeeEEEecCCcEEEccCCCCEeec
Confidence 5777764 56555566778888877765
No 255
>3cw2_K Translation initiation factor 2 subunit beta; AIF2, intact AIF2, initiation factor 2 alpha subunit, initiation factor 2 beta subunit; 2.80A {Sulfolobus solfataricus} PDB: 2nxu_A 2qmu_C* 3v11_C*
Probab=25.73 E-value=27 Score=25.20 Aligned_cols=23 Identities=26% Similarity=0.837 Sum_probs=14.3
Q ss_pred CccccCccccccccc-----cccccccc
Q psy509 31 TCHRCRTTFSLVQRK-----HHCRACGQ 53 (158)
Q Consensus 31 ~C~~C~~~F~~~~Rk-----hhCr~CG~ 53 (158)
.|..|+.+-+.+.++ .+|..||.
T Consensus 105 lC~~C~sPdT~l~k~~r~~~l~C~ACGa 132 (139)
T 3cw2_K 105 ECSTCKSLDTILKKEKKSWYIVCLACGA 132 (139)
T ss_dssp SCCSSSSSCCCSCSSCSTTTSSCCC---
T ss_pred ECCCCCCcCcEEEEeCCeEEEEecCCCC
Confidence 688888888766554 45666665
No 256
>3h0g_I DNA-directed RNA polymerases I, II, and III subunit rpabc5; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=25.72 E-value=35 Score=23.38 Aligned_cols=28 Identities=14% Similarity=0.304 Sum_probs=13.8
Q ss_pred ecCCCCCCccccCCCCCCCceeeChhhH
Q psy509 55 FCQLCSSKSTSLPKFGIEKEVRVCEDCH 82 (158)
Q Consensus 55 fC~~Cs~~~~~lp~~~~~~~~RVC~~C~ 82 (158)
||..|.+-..+....+.....-+|..|-
T Consensus 6 FCp~Cgn~L~~~~~~~~~~~~~~C~~C~ 33 (113)
T 3h0g_I 6 YCIECNNMLYPREDKVDRVLRLACRNCD 33 (113)
T ss_dssp CCSSSCCCCEECCCTTTCCCCEECSSSC
T ss_pred eCcCCCCEeeEcccCCCCeeEEECCCCC
Confidence 6666665533222222234456777773
No 257
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.53 E-value=24 Score=18.65 Aligned_cols=14 Identities=29% Similarity=0.916 Sum_probs=10.0
Q ss_pred ccccccccccceec
Q psy509 43 QRKHHCRACGQVFC 56 (158)
Q Consensus 43 ~RkhhCr~CG~vfC 56 (158)
.+.+.|..||+.|-
T Consensus 10 ~k~~~C~~C~k~f~ 23 (46)
T 2eow_A 10 EKPYKCNECGKAFR 23 (46)
T ss_dssp CCCEECTTSCCEES
T ss_pred CCCeeccccCChhc
Confidence 35577888888773
No 258
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.34 E-value=25 Score=18.54 Aligned_cols=13 Identities=31% Similarity=1.009 Sum_probs=9.3
Q ss_pred cccccccccccee
Q psy509 43 QRKHHCRACGQVF 55 (158)
Q Consensus 43 ~RkhhCr~CG~vf 55 (158)
.+.+.|..||+.|
T Consensus 10 ~~~~~C~~C~k~f 22 (46)
T 2yrj_A 10 EKPYRCGECGKAF 22 (46)
T ss_dssp CCCEECSSSCCEE
T ss_pred CCCeECCCCCCcc
Confidence 3557788888877
No 259
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.30 E-value=23 Score=18.73 Aligned_cols=13 Identities=38% Similarity=1.127 Sum_probs=8.8
Q ss_pred cccccccccccee
Q psy509 43 QRKHHCRACGQVF 55 (158)
Q Consensus 43 ~RkhhCr~CG~vf 55 (158)
.+.+.|..||+.|
T Consensus 10 ~k~~~C~~C~k~F 22 (46)
T 2enf_A 10 EKPYKCNECGKVF 22 (46)
T ss_dssp CCSCBCSSSCCBC
T ss_pred CcCeECCCCCccc
Confidence 3556777777766
No 260
>2vje_A E3 ubiquitin-protein ligase MDM2; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_A* 2hdp_A
Probab=25.13 E-value=15 Score=22.22 Aligned_cols=34 Identities=18% Similarity=0.255 Sum_probs=22.3
Q ss_pred cCCCccccCccccccccccccccccce-ecCCCCCCc
Q psy509 28 DGDTCHRCRTTFSLVQRKHHCRACGQV-FCQLCSSKS 63 (158)
Q Consensus 28 ~~~~C~~C~~~F~~~~RkhhCr~CG~v-fC~~Cs~~~ 63 (158)
+...|.+|...+....-- -..||++ ||..|....
T Consensus 7 ~~~~C~IC~~~~~~~~~~--~~pCgH~~~C~~C~~~~ 41 (64)
T 2vje_A 7 AIEPCVICQGRPKNGCIV--HGKTGHLMACFTCAKKL 41 (64)
T ss_dssp GGSCCTTTSSSCSCEEEE--ETTEEEEEECHHHHHHH
T ss_pred CcCCCCcCCCCCCCEEEE--CCCCCChhhHHHHHHHH
Confidence 456899998776422100 0269999 899998754
No 261
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.08 E-value=26 Score=18.62 Aligned_cols=13 Identities=38% Similarity=1.106 Sum_probs=9.3
Q ss_pred cccccccccccee
Q psy509 43 QRKHHCRACGQVF 55 (158)
Q Consensus 43 ~RkhhCr~CG~vf 55 (158)
.+.+.|..||+.|
T Consensus 10 ~k~~~C~~C~k~F 22 (46)
T 2ytp_A 10 ERHYECSECGKAF 22 (46)
T ss_dssp CCCEECSSSCCEE
T ss_pred CCCeECCcCCccc
Confidence 3557788888877
No 262
>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=24.87 E-value=25 Score=18.45 Aligned_cols=13 Identities=23% Similarity=0.644 Sum_probs=8.7
Q ss_pred cccccccccccee
Q psy509 43 QRKHHCRACGQVF 55 (158)
Q Consensus 43 ~RkhhCr~CG~vf 55 (158)
.+.+.|..||+.|
T Consensus 8 ~k~~~C~~C~k~f 20 (43)
T 2yrm_A 8 NGAFFCNECDCRF 20 (43)
T ss_dssp SCCBCCSSSCCCB
T ss_pred CCCEECCCCCCee
Confidence 3556777777766
No 263
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.84 E-value=26 Score=18.48 Aligned_cols=14 Identities=21% Similarity=0.778 Sum_probs=9.7
Q ss_pred ccccccccccceec
Q psy509 43 QRKHHCRACGQVFC 56 (158)
Q Consensus 43 ~RkhhCr~CG~vfC 56 (158)
.+.+.|..||+.|-
T Consensus 10 ~k~~~C~~C~k~f~ 23 (46)
T 2ytf_A 10 EKPFECSECQKAFN 23 (46)
T ss_dssp CCSEECSSSCCEES
T ss_pred CCCcCCCCCCcccC
Confidence 35577888888773
No 264
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.80 E-value=25 Score=18.54 Aligned_cols=14 Identities=29% Similarity=0.850 Sum_probs=10.2
Q ss_pred ccccccccccceec
Q psy509 43 QRKHHCRACGQVFC 56 (158)
Q Consensus 43 ~RkhhCr~CG~vfC 56 (158)
.+.+.|..||+.|-
T Consensus 10 ~k~~~C~~C~k~f~ 23 (46)
T 2yts_A 10 EKPYICNECGKSFI 23 (46)
T ss_dssp CCSEECSSSCCEES
T ss_pred CcCEECCCCChhhC
Confidence 45677888888873
No 265
>2jox_A Churchill protein; zinc, transcription; NMR {Homo sapiens}
Probab=24.71 E-value=27 Score=24.07 Aligned_cols=27 Identities=30% Similarity=0.727 Sum_probs=18.1
Q ss_pred CCCccccCc-cccccc--------------ccccccccccee
Q psy509 29 GDTCHRCRT-TFSLVQ--------------RKHHCRACGQVF 55 (158)
Q Consensus 29 ~~~C~~C~~-~F~~~~--------------RkhhCr~CG~vf 55 (158)
-..|..|++ .|-++. =.|-|.+|++++
T Consensus 26 f~gC~~C~~~~~~~v~nk~~~eedgeEiity~H~C~nC~HvI 67 (106)
T 2jox_A 26 FTGCAVCSKRDFMLITNKSLKEEDGEEIVTYDHLCKNCHHVI 67 (106)
T ss_dssp BCCCSSSCCSSCEEEEEEEEEEETTEEEEEEEEEETTTCCEE
T ss_pred chhhhhcCCCceEEEeccccccCCCcEEEEEEEecCCCceEe
Confidence 357888876 443332 248999999884
No 266
>2ds5_A CLPX, ATP-dependent CLP protease ATP-binding subunit CLPX; treble cleft zinc finger, metal binding protein, protein binding; HET: PG4; 1.50A {Escherichia coli} SCOP: g.39.1.11 PDB: 2ds6_A 2ds8_A 2ds7_A
Probab=24.63 E-value=30 Score=20.62 Aligned_cols=15 Identities=20% Similarity=0.736 Sum_probs=11.4
Q ss_pred ceeeChhhHHHHhcc
Q psy509 74 EVRVCEDCHEKFTNY 88 (158)
Q Consensus 74 ~~RVC~~C~~~l~~~ 88 (158)
.+-+|+.|.......
T Consensus 32 gv~IC~eCi~~~~~i 46 (51)
T 2ds5_A 32 SVYICDECVDLCNDI 46 (51)
T ss_dssp SCEEEHHHHHHHHHH
T ss_pred CCEehHHHHHHHHHH
Confidence 378999998876553
No 267
>2pk7_A Uncharacterized protein; NESG, PLR1, putative tetraacyldisaccharide-1-P 4-kinase, Q4K structural genomics, PSI-2; 2.20A {Pseudomonas fluorescens} SCOP: b.171.1.1
Probab=24.55 E-value=31 Score=21.83 Aligned_cols=13 Identities=23% Similarity=0.498 Sum_probs=9.2
Q ss_pred CCCccccCccccc
Q psy509 29 GDTCHRCRTTFSL 41 (158)
Q Consensus 29 ~~~C~~C~~~F~~ 41 (158)
.-.|..|+.+..+
T Consensus 8 iL~CP~ck~~L~~ 20 (69)
T 2pk7_A 8 ILACPICKGPLKL 20 (69)
T ss_dssp TCCCTTTCCCCEE
T ss_pred heeCCCCCCcCeE
Confidence 4478888877654
No 268
>1n0z_A ZNF265; zinc finger, RNA splicing, transcription; NMR {Homo sapiens} SCOP: g.41.11.1
Probab=24.42 E-value=76 Score=18.17 Aligned_cols=21 Identities=29% Similarity=0.896 Sum_probs=15.1
Q ss_pred Ccc--ccCccccccccccccccccc
Q psy509 31 TCH--RCRTTFSLVQRKHHCRACGQ 53 (158)
Q Consensus 31 ~C~--~C~~~F~~~~RkhhCr~CG~ 53 (158)
.|. .|+. .-|.||..|-.||.
T Consensus 16 ~C~~~~C~~--~Nfa~R~~C~~C~~ 38 (45)
T 1n0z_A 16 ICPDKKCGN--VNFARRTSCDRCGR 38 (45)
T ss_dssp BCSSTTTCC--BCCSSCSBCSSSCC
T ss_pred CCCCCCCCC--EEccccccccccCC
Confidence 566 4554 56788889988876
No 269
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.38 E-value=25 Score=18.69 Aligned_cols=14 Identities=21% Similarity=0.774 Sum_probs=9.4
Q ss_pred ccccccccccceec
Q psy509 43 QRKHHCRACGQVFC 56 (158)
Q Consensus 43 ~RkhhCr~CG~vfC 56 (158)
.+.+.|..||+.|-
T Consensus 10 ~k~~~C~~C~k~F~ 23 (46)
T 2enh_A 10 EKPYECDVCRKAFS 23 (46)
T ss_dssp SSSCBCTTTCCBCS
T ss_pred CCCcCCCCcCchhC
Confidence 35567777877763
No 270
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=24.35 E-value=26 Score=18.09 Aligned_cols=12 Identities=33% Similarity=0.916 Sum_probs=8.2
Q ss_pred ccccccccccee
Q psy509 44 RKHHCRACGQVF 55 (158)
Q Consensus 44 RkhhCr~CG~vf 55 (158)
+.+.|..||+.|
T Consensus 10 k~~~C~~C~k~f 21 (42)
T 2eos_A 10 KPYPCEICGTRF 21 (42)
T ss_dssp CCBCCSSSCCCB
T ss_pred CCEECCCCCCcc
Confidence 456677777766
No 271
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.31 E-value=26 Score=18.01 Aligned_cols=13 Identities=31% Similarity=0.981 Sum_probs=8.7
Q ss_pred cccccccccceec
Q psy509 44 RKHHCRACGQVFC 56 (158)
Q Consensus 44 RkhhCr~CG~vfC 56 (158)
+.+.|..||+.|-
T Consensus 10 k~~~C~~C~k~f~ 22 (42)
T 2ytb_A 10 KPYRCDQCGKAFS 22 (42)
T ss_dssp CSBCCTTTTCCBS
T ss_pred CCeeCCCccchhC
Confidence 4566777777663
No 272
>3ifu_A Non-structural protein; PRRSV, NSP1, zinc finger, papain-like cysteine protease, transcription; 2.42A {Porcine reproductive and respiratorysyndrome virus}
Probab=24.29 E-value=32 Score=25.18 Aligned_cols=18 Identities=50% Similarity=0.898 Sum_probs=14.6
Q ss_pred cccceecCCCCCCccccC
Q psy509 50 ACGQVFCQLCSSKSTSLP 67 (158)
Q Consensus 50 ~CG~vfC~~Cs~~~~~lp 67 (158)
.=|+|||..|.+.+..||
T Consensus 19 ~~gqvyctrclsar~llp 36 (180)
T 3ifu_A 19 AEGQVYCTRCLSARSLLP 36 (180)
T ss_dssp CSSCEEETTTCCBCCCCC
T ss_pred hcCeEeeeehhcccccCC
Confidence 349999999999876665
No 273
>1s24_A Rubredoxin 2; electron transport; NMR {Pseudomonas oleovorans} SCOP: g.41.5.1
Probab=24.25 E-value=21 Score=23.81 Aligned_cols=16 Identities=25% Similarity=0.669 Sum_probs=12.8
Q ss_pred cccccccccccceecC
Q psy509 42 VQRKHHCRACGQVFCQ 57 (158)
Q Consensus 42 ~~RkhhCr~CG~vfC~ 57 (158)
...++.|+.||.|+=.
T Consensus 32 ~m~~y~C~vCGyvYD~ 47 (87)
T 1s24_A 32 AYLKWICITCGHIYDE 47 (87)
T ss_dssp CCCEEEETTTTEEEET
T ss_pred CCceEECCCCCeEecC
Confidence 3568999999999854
No 274
>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B
Probab=24.20 E-value=21 Score=19.26 Aligned_cols=14 Identities=29% Similarity=0.797 Sum_probs=10.0
Q ss_pred ccccccccccceec
Q psy509 43 QRKHHCRACGQVFC 56 (158)
Q Consensus 43 ~RkhhCr~CG~vfC 56 (158)
.+.+.|..||+.|-
T Consensus 6 ekp~~C~~CgK~F~ 19 (36)
T 1fv5_A 6 PARFMCLPCGIAFS 19 (36)
T ss_dssp CCCCEETTTTEECS
T ss_pred ccCeECCCCCCccC
Confidence 35677888888773
No 275
>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=24.16 E-value=27 Score=18.25 Aligned_cols=13 Identities=23% Similarity=0.769 Sum_probs=9.1
Q ss_pred cccccccccceec
Q psy509 44 RKHHCRACGQVFC 56 (158)
Q Consensus 44 RkhhCr~CG~vfC 56 (158)
+.+.|..||+.|-
T Consensus 11 k~~~C~~C~k~f~ 23 (44)
T 2emb_A 11 KRYECSKCQATFN 23 (44)
T ss_dssp SSEECTTTCCEES
T ss_pred CCeECCCCCCccC
Confidence 4567888887773
No 276
>2jny_A Uncharacterized BCR; structure, CGR1, NESG, structural genomics, PSI-2, protein structure initiative; NMR {Corynebacterium glutamicum} SCOP: b.171.1.1
Probab=24.14 E-value=30 Score=21.78 Aligned_cols=15 Identities=7% Similarity=0.250 Sum_probs=10.4
Q ss_pred cCCCccccCcccccc
Q psy509 28 DGDTCHRCRTTFSLV 42 (158)
Q Consensus 28 ~~~~C~~C~~~F~~~ 42 (158)
+.-.|..|..+..+.
T Consensus 9 eiL~CP~ck~~L~~~ 23 (67)
T 2jny_A 9 EVLACPKDKGPLRYL 23 (67)
T ss_dssp CCCBCTTTCCBCEEE
T ss_pred HHhCCCCCCCcCeEe
Confidence 345788998876654
No 277
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.07 E-value=25 Score=18.75 Aligned_cols=13 Identities=31% Similarity=1.076 Sum_probs=9.2
Q ss_pred cccccccccccee
Q psy509 43 QRKHHCRACGQVF 55 (158)
Q Consensus 43 ~RkhhCr~CG~vf 55 (158)
.+.+.|..||+.|
T Consensus 10 ~k~~~C~~C~k~f 22 (46)
T 2eon_A 10 EKPYKCQVCGKAF 22 (46)
T ss_dssp CCSCBCSSSCCBC
T ss_pred CcccCCCCCCccc
Confidence 3556788888776
No 278
>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.06 E-value=27 Score=18.40 Aligned_cols=13 Identities=31% Similarity=1.060 Sum_probs=9.1
Q ss_pred cccccccccccee
Q psy509 43 QRKHHCRACGQVF 55 (158)
Q Consensus 43 ~RkhhCr~CG~vf 55 (158)
.+.+.|..||+.|
T Consensus 10 ~~~~~C~~C~k~f 22 (46)
T 2eor_A 10 EKPYNCEECGKAF 22 (46)
T ss_dssp CCSEECTTTCCEE
T ss_pred CcCccCCCCCCCc
Confidence 3556777888777
No 279
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.97 E-value=28 Score=17.94 Aligned_cols=12 Identities=33% Similarity=0.996 Sum_probs=8.5
Q ss_pred ccccccccccee
Q psy509 44 RKHHCRACGQVF 55 (158)
Q Consensus 44 RkhhCr~CG~vf 55 (158)
+.+.|..||+.|
T Consensus 10 k~~~C~~C~k~f 21 (42)
T 2en2_A 10 KPYKCETCGARF 21 (42)
T ss_dssp CSEECTTTCCEE
T ss_pred CCEeCCCcChhh
Confidence 456777777776
No 280
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.94 E-value=27 Score=18.26 Aligned_cols=14 Identities=29% Similarity=0.852 Sum_probs=9.9
Q ss_pred ccccccccccceec
Q psy509 43 QRKHHCRACGQVFC 56 (158)
Q Consensus 43 ~RkhhCr~CG~vfC 56 (158)
.+.+.|..||+.|-
T Consensus 10 ~k~~~C~~C~k~f~ 23 (44)
T 2yu5_A 10 ENPFKCSKCDRVFT 23 (44)
T ss_dssp CCSEECSSSSCEES
T ss_pred CCCeECCCCCchhC
Confidence 35577888888773
No 281
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.88 E-value=14 Score=23.71 Aligned_cols=47 Identities=19% Similarity=0.516 Sum_probs=31.1
Q ss_pred CCCccccCccccccccccccccccceecCCCCCCccccCCCCCCCceeeChhhHHH
Q psy509 29 GDTCHRCRTTFSLVQRKHHCRACGQVFCQLCSSKSTSLPKFGIEKEVRVCEDCHEK 84 (158)
Q Consensus 29 ~~~C~~C~~~F~~~~RkhhCr~CG~vfC~~Cs~~~~~lp~~~~~~~~RVC~~C~~~ 84 (158)
.+.|.+|...|.. ..-|..||..|=..|..+++. ....++|..|...
T Consensus 15 i~~C~IC~~~i~~---g~~C~~C~h~fH~~Ci~kWl~------~~~~~~CP~Cr~~ 61 (74)
T 2ct0_A 15 VKICNICHSLLIQ---GQSCETCGIRMHLPCVAKYFQ------SNAEPRCPHCNDY 61 (74)
T ss_dssp SCBCSSSCCBCSS---SEECSSSCCEECHHHHHHHST------TCSSCCCTTTCSC
T ss_pred CCcCcchhhHccc---CCccCCCCchhhHHHHHHHHH------hcCCCCCCCCcCc
Confidence 4689999998853 345778888776677666632 1223678888644
No 282
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Probab=23.84 E-value=28 Score=17.90 Aligned_cols=12 Identities=33% Similarity=0.996 Sum_probs=8.6
Q ss_pred ccccccccccee
Q psy509 44 RKHHCRACGQVF 55 (158)
Q Consensus 44 RkhhCr~CG~vf 55 (158)
+.+-|..||+.|
T Consensus 9 k~~~C~~C~k~f 20 (42)
T 2el5_A 9 NPYECSECGKAF 20 (42)
T ss_dssp CSEECSSSCCEE
T ss_pred CCccCCCcChhh
Confidence 456777777776
No 283
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A
Probab=23.74 E-value=28 Score=18.44 Aligned_cols=13 Identities=31% Similarity=1.040 Sum_probs=9.2
Q ss_pred cccccccccccee
Q psy509 43 QRKHHCRACGQVF 55 (158)
Q Consensus 43 ~RkhhCr~CG~vf 55 (158)
.+.+.|..||+.|
T Consensus 10 ~k~~~C~~C~k~F 22 (46)
T 2emj_A 10 EKPFECAECGKSF 22 (46)
T ss_dssp CCSEECSSSSCEE
T ss_pred CCCEECCCCCccc
Confidence 3556788888777
No 284
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.71 E-value=24 Score=18.66 Aligned_cols=13 Identities=31% Similarity=0.989 Sum_probs=8.7
Q ss_pred cccccccccccee
Q psy509 43 QRKHHCRACGQVF 55 (158)
Q Consensus 43 ~RkhhCr~CG~vf 55 (158)
.+.+.|..||+.|
T Consensus 10 ~k~~~C~~C~k~f 22 (46)
T 2eq2_A 10 GKPYQCNECGKAF 22 (46)
T ss_dssp SCSSSCCSSCCCC
T ss_pred CCCeECCCCCccc
Confidence 3456777777766
No 285
>1d4u_A Nucleotide excision repair protein XPA (XPA-MBD); DNA repair, loop-rich domain, relaxation, DNA binding protein; NMR {Homo sapiens} SCOP: a.6.1.2 g.39.1.5 PDB: 1xpa_A
Probab=23.70 E-value=44 Score=23.18 Aligned_cols=11 Identities=27% Similarity=1.117 Sum_probs=8.8
Q ss_pred ceeeChhhHHH
Q psy509 74 EVRVCEDCHEK 84 (158)
Q Consensus 74 ~~RVC~~C~~~ 84 (158)
.++||+.|...
T Consensus 25 ~~~VC~~Cr~~ 35 (111)
T 1d4u_A 25 DLPTCDDCRDA 35 (111)
T ss_dssp SCCCCTTTCSS
T ss_pred Ceeechhhccc
Confidence 47899999865
No 286
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.69 E-value=27 Score=18.50 Aligned_cols=14 Identities=21% Similarity=0.781 Sum_probs=10.1
Q ss_pred ccccccccccceec
Q psy509 43 QRKHHCRACGQVFC 56 (158)
Q Consensus 43 ~RkhhCr~CG~vfC 56 (158)
.+.+.|..||+.|-
T Consensus 10 ~k~~~C~~C~k~f~ 23 (46)
T 2eoy_A 10 EKCFKCNKCEKTFS 23 (46)
T ss_dssp SCCEECSSSCCEES
T ss_pred CCCEECcCCCCcCC
Confidence 35577888888873
No 287
>1j0t_A MIH, MOLT-inhibiting hormone; alpha-helical protein, hormone/growth factor complex; NMR {Marsupenaeus japonicus} SCOP: a.163.1.1
Probab=23.63 E-value=17 Score=23.83 Aligned_cols=15 Identities=60% Similarity=1.030 Sum_probs=12.0
Q ss_pred CceeeChhhHHHHhc
Q psy509 73 KEVRVCEDCHEKFTN 87 (158)
Q Consensus 73 ~~~RVC~~C~~~l~~ 87 (158)
+--|||+.||.....
T Consensus 20 kldrVCdDCyNLyR~ 34 (78)
T 1j0t_A 20 KVVRVCEDCTNIFRL 34 (78)
T ss_dssp HHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHhcC
Confidence 456999999998753
No 288
>2kr4_A Ubiquitin conjugation factor E4 B; U-BOX, UFD2, ring, E3 ligase, UBL conjugation pathway; NMR {Mus musculus}
Probab=23.57 E-value=19 Score=23.05 Aligned_cols=29 Identities=10% Similarity=-0.154 Sum_probs=15.2
Q ss_pred CCccccCccccccccccccccccceecCCCCCC
Q psy509 30 DTCHRCRTTFSLVQRKHHCRACGQVFCQLCSSK 62 (158)
Q Consensus 30 ~~C~~C~~~F~~~~RkhhCr~CG~vfC~~Cs~~ 62 (158)
-.|.+|...|.- -..-.||++||..|...
T Consensus 15 ~~CpI~~~~m~d----PV~~~cGhtf~r~~I~~ 43 (85)
T 2kr4_A 15 FRDPLMDTLMTD----PVRLPSGTVMDRSIILR 43 (85)
T ss_dssp TBCTTTCSBCSS----EEECTTSCEEEHHHHHH
T ss_pred eECcccCchhcC----CeECCCCCEECHHHHHH
Confidence 357777665531 11123677776665444
No 289
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.50 E-value=28 Score=18.38 Aligned_cols=14 Identities=36% Similarity=1.001 Sum_probs=10.1
Q ss_pred ccccccccccceec
Q psy509 43 QRKHHCRACGQVFC 56 (158)
Q Consensus 43 ~RkhhCr~CG~vfC 56 (158)
.+.+.|..||+.|-
T Consensus 10 ~k~~~C~~C~k~F~ 23 (46)
T 2eq0_A 10 EKPYKCHECGKVFR 23 (46)
T ss_dssp CCCEECTTTCCEES
T ss_pred CCCeECCCCCchhC
Confidence 45677888888774
No 290
>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.49 E-value=25 Score=18.49 Aligned_cols=12 Identities=33% Similarity=1.187 Sum_probs=7.7
Q ss_pred ccccccccccee
Q psy509 44 RKHHCRACGQVF 55 (158)
Q Consensus 44 RkhhCr~CG~vf 55 (158)
+.+.|..||+.|
T Consensus 11 ~~~~C~~C~k~f 22 (44)
T 2eou_A 11 TTSECQECGKIF 22 (44)
T ss_dssp CCCCCTTTCCCC
T ss_pred cCeECCCCCccc
Confidence 445677777665
No 291
>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.43 E-value=25 Score=18.73 Aligned_cols=12 Identities=50% Similarity=1.328 Sum_probs=7.7
Q ss_pred ccccccccccee
Q psy509 44 RKHHCRACGQVF 55 (158)
Q Consensus 44 RkhhCr~CG~vf 55 (158)
+.+.|..||+.|
T Consensus 11 k~~~C~~C~k~F 22 (46)
T 2eom_A 11 RGHRCSDCGKFF 22 (46)
T ss_dssp SSCCCSSSCCCC
T ss_pred CCcCCCCCCCee
Confidence 456677777665
No 292
>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*
Probab=23.43 E-value=27 Score=19.44 Aligned_cols=12 Identities=25% Similarity=0.592 Sum_probs=8.7
Q ss_pred ccccccccccee
Q psy509 44 RKHHCRACGQVF 55 (158)
Q Consensus 44 RkhhCr~CG~vf 55 (158)
+.+.|..||..|
T Consensus 23 k~~~C~~C~k~f 34 (54)
T 1yui_A 23 QPATCPICYAVI 34 (54)
T ss_dssp CCEECTTTCCEE
T ss_pred CCccCCCCCccc
Confidence 456788888776
No 293
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.38 E-value=29 Score=18.34 Aligned_cols=14 Identities=29% Similarity=0.935 Sum_probs=9.9
Q ss_pred ccccccccccceec
Q psy509 43 QRKHHCRACGQVFC 56 (158)
Q Consensus 43 ~RkhhCr~CG~vfC 56 (158)
.+.+.|..||+.|-
T Consensus 10 ~k~~~C~~C~k~f~ 23 (46)
T 2ep3_A 10 EKPYRCAECGKAFT 23 (46)
T ss_dssp CCSEECSSSCCEES
T ss_pred CCCeECCCCCchhC
Confidence 35577888888773
No 294
>2kpi_A Uncharacterized protein SCO3027; zinc finger, PSI-2, NESG, all beta, structural genomics, protein structure initiative; NMR {Streptomyces coelicolor}
Probab=23.35 E-value=32 Score=20.78 Aligned_cols=26 Identities=15% Similarity=0.488 Sum_probs=16.9
Q ss_pred cCCCccccCccccccccccccccccceecC--CCCC
Q psy509 28 DGDTCHRCRTTFSLVQRKHHCRACGQVFCQ--LCSS 61 (158)
Q Consensus 28 ~~~~C~~C~~~F~~~~RkhhCr~CG~vfC~--~Cs~ 61 (158)
+--.|..|+....+-. |..+|. .|..
T Consensus 9 ~iL~CP~c~~~L~~~~--------~~L~C~~~~c~~ 36 (56)
T 2kpi_A 9 EILACPACHAPLEERD--------AELICTGQDCGL 36 (56)
T ss_dssp TSCCCSSSCSCEEEET--------TEEEECSSSCCC
T ss_pred hheeCCCCCCcceecC--------CEEEcCCcCCCc
Confidence 3457999998766544 666666 5543
No 295
>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.28 E-value=29 Score=18.38 Aligned_cols=13 Identities=46% Similarity=1.045 Sum_probs=9.0
Q ss_pred cccccccccccee
Q psy509 43 QRKHHCRACGQVF 55 (158)
Q Consensus 43 ~RkhhCr~CG~vf 55 (158)
.+.+-|..||+.|
T Consensus 10 ~k~~~C~~C~k~f 22 (46)
T 2em4_A 10 QRPYECIECGKAF 22 (46)
T ss_dssp SSSEECSSSCCEE
T ss_pred CcCcCCCCCCCcc
Confidence 3556777788777
No 296
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.25 E-value=25 Score=18.60 Aligned_cols=13 Identities=38% Similarity=1.127 Sum_probs=8.6
Q ss_pred cccccccccccee
Q psy509 43 QRKHHCRACGQVF 55 (158)
Q Consensus 43 ~RkhhCr~CG~vf 55 (158)
.+.+.|..||+.|
T Consensus 10 ~k~~~C~~C~k~F 22 (46)
T 2yti_A 10 EKPYKCNECGKVF 22 (46)
T ss_dssp CCTTCCSSSCCCC
T ss_pred CcCeECCCCCccc
Confidence 3456677777766
No 297
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.20 E-value=27 Score=18.52 Aligned_cols=13 Identities=23% Similarity=0.853 Sum_probs=8.4
Q ss_pred cccccccccccee
Q psy509 43 QRKHHCRACGQVF 55 (158)
Q Consensus 43 ~RkhhCr~CG~vf 55 (158)
.+.+.|..||+.|
T Consensus 10 ~k~~~C~~C~k~F 22 (46)
T 2en9_A 10 KKLFKCNECKKTF 22 (46)
T ss_dssp SCCCBCTTTCCBC
T ss_pred CCCEECCccCccc
Confidence 3456677777766
No 298
>3u5c_b RP61, YS20, 40S ribosomal protein S27-A; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_X 3u5g_b
Probab=23.20 E-value=33 Score=22.65 Aligned_cols=27 Identities=30% Similarity=0.839 Sum_probs=17.8
Q ss_pred CccccCc---cccccccccccccccceecC
Q psy509 31 TCHRCRT---TFSLVQRKHHCRACGQVFCQ 57 (158)
Q Consensus 31 ~C~~C~~---~F~~~~RkhhCr~CG~vfC~ 57 (158)
.|..|+. .|+--.....|..||.++|.
T Consensus 36 kCp~C~~~q~VFSha~t~V~C~~Cg~~L~~ 65 (82)
T 3u5c_b 36 KCPGCLNITTVFSHAQTAVTCESCSTILCT 65 (82)
T ss_dssp ECTTSCSCEEEESBCSSCCCCSSSCCCCEE
T ss_pred ECCCCCCeeEEEecCCeEEEccccCCEEec
Confidence 5777764 55555556677777777664
No 299
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.18 E-value=29 Score=18.31 Aligned_cols=13 Identities=31% Similarity=1.012 Sum_probs=9.3
Q ss_pred cccccccccccee
Q psy509 43 QRKHHCRACGQVF 55 (158)
Q Consensus 43 ~RkhhCr~CG~vf 55 (158)
.|.+.|..||+.|
T Consensus 10 ~k~~~C~~C~k~f 22 (46)
T 2enc_A 10 EKPFKCEECGKGF 22 (46)
T ss_dssp CCSEECSSSCCEE
T ss_pred CCCcCCCCCCCcC
Confidence 3557788888877
No 300
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.09 E-value=29 Score=18.30 Aligned_cols=14 Identities=29% Similarity=0.864 Sum_probs=9.9
Q ss_pred ccccccccccceec
Q psy509 43 QRKHHCRACGQVFC 56 (158)
Q Consensus 43 ~RkhhCr~CG~vfC 56 (158)
.+.+.|..||+.|-
T Consensus 10 ~k~~~C~~C~k~f~ 23 (46)
T 2em7_A 10 EKPYKCEECGKGFI 23 (46)
T ss_dssp CCSEECSSSCCEES
T ss_pred CcCccCCCccchhC
Confidence 35677888888773
No 301
>1x4k_A Skeletal muscle LIM-protein 3; LIM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=23.08 E-value=50 Score=19.74 Aligned_cols=54 Identities=22% Similarity=0.520 Sum_probs=26.8
Q ss_pred CCccccCccccc-------cccccccccccceecCCCCCCccccCCCCCCCceeeChhhHHHHhc
Q psy509 30 DTCHRCRTTFSL-------VQRKHHCRACGQVFCQLCSSKSTSLPKFGIEKEVRVCEDCHEKFTN 87 (158)
Q Consensus 30 ~~C~~C~~~F~~-------~~RkhhCr~CG~vfC~~Cs~~~~~lp~~~~~~~~RVC~~C~~~l~~ 87 (158)
..|..|++.... ..+..| ..| ..|..|....... .+-.....-+|..||..+..
T Consensus 6 ~~C~~C~~~I~~~~~~~~a~~~~~H-~~C--F~C~~C~~~L~~~-~~~~~~~~~yC~~cy~~~f~ 66 (72)
T 1x4k_A 6 SGCQECKKTIMPGTRKMEYKGSSWH-ETC--FICHRCQQPIGTK-SFIPKDNQNFCVPCYEKQHA 66 (72)
T ss_dssp CCBSSSCCCCCSSSCEEEETTEEEE-TTT--TCCSSSCCCCCSS-SEEEETTEEEEHHHHHHHTS
T ss_pred CCCccCCCcccCCceEEEECcCeec-ccC--CcccccCCccCCC-ccCccCCeEECHHHHhHHhC
Confidence 478888876641 122333 222 2345554332111 11112345689999987644
No 302
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Probab=23.05 E-value=32 Score=22.07 Aligned_cols=25 Identities=28% Similarity=0.838 Sum_probs=16.6
Q ss_pred Ccc--ccCcccccc------------cccccccccccee
Q psy509 31 TCH--RCRTTFSLV------------QRKHHCRACGQVF 55 (158)
Q Consensus 31 ~C~--~C~~~F~~~------------~RkhhCr~CG~vf 55 (158)
.|. .|++.|... .+.+.|..||..|
T Consensus 38 ~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f 76 (119)
T 2jp9_A 38 QCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKF 76 (119)
T ss_dssp ECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEE
T ss_pred cCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchh
Confidence 677 688888621 2345677777776
No 303
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.01 E-value=27 Score=17.88 Aligned_cols=12 Identities=25% Similarity=0.825 Sum_probs=7.6
Q ss_pred ccccccccccee
Q psy509 44 RKHHCRACGQVF 55 (158)
Q Consensus 44 RkhhCr~CG~vf 55 (158)
+.+.|..||+.|
T Consensus 9 k~~~C~~C~k~f 20 (42)
T 2yte_A 9 KPYSCAECKETF 20 (42)
T ss_dssp CSCBCTTTCCBC
T ss_pred CCeECCCCCCcc
Confidence 445677777665
No 304
>2aus_D NOP10, ribosome biogenesis protein NOP10; isomerase, structural protein, isomerase-structural protein; 2.10A {Pyrococcus abyssi} PDB: 3lwr_B 3lwo_B* 3lwq_B* 3lwp_B 3lwv_B 3hax_C* 2hvy_C* 3hay_C* 2ey4_E 3hjw_B* 2rfk_B* 3hjy_B 3mqk_B
Probab=22.99 E-value=40 Score=20.90 Aligned_cols=27 Identities=26% Similarity=0.716 Sum_probs=16.6
Q ss_pred CccccCccccccccccccccccceecCCCCC
Q psy509 31 TCHRCRTTFSLVQRKHHCRACGQVFCQLCSS 61 (158)
Q Consensus 31 ~C~~C~~~F~~~~RkhhCr~CG~vfC~~Cs~ 61 (158)
.|..|+. .++ +..|..||.......-.
T Consensus 7 ~C~~Cg~-YTL---k~~CP~CG~~t~~ahPa 33 (60)
T 2aus_D 7 KCPKCGR-YTL---KETCPVCGEKTKVAHPP 33 (60)
T ss_dssp ECTTTCC-EES---SSBCTTTCSBCEESSCC
T ss_pred ECCCCCC-EEc---cccCcCCCCccCCCCCC
Confidence 5777765 233 66788888776544433
No 305
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.94 E-value=25 Score=18.58 Aligned_cols=12 Identities=33% Similarity=1.082 Sum_probs=8.0
Q ss_pred ccccccccccee
Q psy509 44 RKHHCRACGQVF 55 (158)
Q Consensus 44 RkhhCr~CG~vf 55 (158)
+.+.|..||+.|
T Consensus 11 k~~~C~~C~k~f 22 (46)
T 2eq1_A 11 KPYKCNECGKAF 22 (46)
T ss_dssp CCCCCTTTTCCC
T ss_pred CCeECCcCChhh
Confidence 456677777766
No 306
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.82 E-value=26 Score=18.48 Aligned_cols=12 Identities=33% Similarity=1.024 Sum_probs=7.9
Q ss_pred ccccccccccee
Q psy509 44 RKHHCRACGQVF 55 (158)
Q Consensus 44 RkhhCr~CG~vf 55 (158)
+.+.|..||+.|
T Consensus 11 k~~~C~~C~k~f 22 (46)
T 2ep1_A 11 KPYECSDCGKSF 22 (46)
T ss_dssp CSSCCSSSCCCC
T ss_pred CCcCCCCCCchh
Confidence 456677777766
No 307
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.70 E-value=28 Score=18.44 Aligned_cols=12 Identities=33% Similarity=1.101 Sum_probs=8.6
Q ss_pred ccccccccccee
Q psy509 44 RKHHCRACGQVF 55 (158)
Q Consensus 44 RkhhCr~CG~vf 55 (158)
+.+.|..||+.|
T Consensus 11 k~~~C~~C~k~f 22 (46)
T 2yth_A 11 KPFQCEECGKRF 22 (46)
T ss_dssp SSBCCSSSCCCB
T ss_pred cCCCCCCCCccc
Confidence 556777787776
No 308
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.66 E-value=30 Score=18.23 Aligned_cols=14 Identities=36% Similarity=1.035 Sum_probs=10.1
Q ss_pred ccccccccccceec
Q psy509 43 QRKHHCRACGQVFC 56 (158)
Q Consensus 43 ~RkhhCr~CG~vfC 56 (158)
.+.+.|..||+.|-
T Consensus 10 ~k~~~C~~C~k~f~ 23 (46)
T 2yu8_A 10 EKPYKCNECGKVFT 23 (46)
T ss_dssp CSSEECSSSCCEES
T ss_pred CCCeECCcCCchhC
Confidence 45677888888773
No 309
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.61 E-value=29 Score=18.30 Aligned_cols=13 Identities=23% Similarity=0.943 Sum_probs=9.5
Q ss_pred cccccccccccee
Q psy509 43 QRKHHCRACGQVF 55 (158)
Q Consensus 43 ~RkhhCr~CG~vf 55 (158)
.+.+.|..||+.|
T Consensus 10 ~~~~~C~~C~k~F 22 (46)
T 2em3_A 10 EKPYECKVCSKAF 22 (46)
T ss_dssp CCSEECSSSCCEE
T ss_pred CcCeECCCCCccc
Confidence 3557788888877
No 310
>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.60 E-value=30 Score=18.25 Aligned_cols=14 Identities=43% Similarity=1.355 Sum_probs=9.8
Q ss_pred ccccccccccceec
Q psy509 43 QRKHHCRACGQVFC 56 (158)
Q Consensus 43 ~RkhhCr~CG~vfC 56 (158)
.+.+.|..||+.|-
T Consensus 10 ~~~~~C~~C~k~f~ 23 (46)
T 2yso_A 10 EKSHQCRECGEIFF 23 (46)
T ss_dssp CCCEECTTTCCEES
T ss_pred CCCEEccccChhhC
Confidence 35577888888773
No 311
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Probab=22.57 E-value=31 Score=18.22 Aligned_cols=14 Identities=36% Similarity=1.127 Sum_probs=9.9
Q ss_pred ccccccccccceec
Q psy509 43 QRKHHCRACGQVFC 56 (158)
Q Consensus 43 ~RkhhCr~CG~vfC 56 (158)
.+.+.|..||+.|-
T Consensus 10 ~k~~~C~~C~k~f~ 23 (46)
T 2ema_A 10 EKRYKCNECGKVFS 23 (46)
T ss_dssp SCCEECSSSCCEES
T ss_pred CcCcCCCCCcchhC
Confidence 35577888888773
No 312
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.54 E-value=31 Score=18.22 Aligned_cols=14 Identities=21% Similarity=0.688 Sum_probs=10.0
Q ss_pred ccccccccccceec
Q psy509 43 QRKHHCRACGQVFC 56 (158)
Q Consensus 43 ~RkhhCr~CG~vfC 56 (158)
.+.+.|..||+.|-
T Consensus 10 ~~~~~C~~C~k~f~ 23 (46)
T 2ep0_A 10 EKPYKCDVCHKSFR 23 (46)
T ss_dssp CCSEECSSSCCEES
T ss_pred CCCeeCcccCcccC
Confidence 45677888888773
No 313
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.51 E-value=31 Score=18.21 Aligned_cols=14 Identities=29% Similarity=0.916 Sum_probs=9.8
Q ss_pred ccccccccccceec
Q psy509 43 QRKHHCRACGQVFC 56 (158)
Q Consensus 43 ~RkhhCr~CG~vfC 56 (158)
.+.+.|..||+.|-
T Consensus 10 ~k~~~C~~C~k~F~ 23 (46)
T 2emy_A 10 ENPYECHECGKAFS 23 (46)
T ss_dssp SCCEECSSSCCEES
T ss_pred CcCcCCCCCCcccC
Confidence 35577888888773
No 314
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Probab=22.45 E-value=30 Score=18.21 Aligned_cols=14 Identities=29% Similarity=0.961 Sum_probs=10.4
Q ss_pred ccccccccccceec
Q psy509 43 QRKHHCRACGQVFC 56 (158)
Q Consensus 43 ~RkhhCr~CG~vfC 56 (158)
.+.+.|..||+.|-
T Consensus 10 ~k~~~C~~C~k~f~ 23 (46)
T 2em9_A 10 EKPYNCKECGKSFR 23 (46)
T ss_dssp CCSEECSSSCCEES
T ss_pred CcCeECCccccccC
Confidence 45677888888873
No 315
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.40 E-value=26 Score=18.23 Aligned_cols=12 Identities=33% Similarity=1.010 Sum_probs=8.2
Q ss_pred ccccccccccee
Q psy509 44 RKHHCRACGQVF 55 (158)
Q Consensus 44 RkhhCr~CG~vf 55 (158)
+.+.|..||+.|
T Consensus 11 k~~~C~~C~k~f 22 (44)
T 2en7_A 11 KPYVCNECGKAF 22 (44)
T ss_dssp SSSCCTTTCCCC
T ss_pred cCeECCCCCCcc
Confidence 456677777766
No 316
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.27 E-value=31 Score=18.18 Aligned_cols=14 Identities=36% Similarity=0.994 Sum_probs=10.0
Q ss_pred ccccccccccceec
Q psy509 43 QRKHHCRACGQVFC 56 (158)
Q Consensus 43 ~RkhhCr~CG~vfC 56 (158)
.+.+.|..||+.|-
T Consensus 10 ~k~~~C~~C~k~f~ 23 (46)
T 2ene_A 10 EKPYKCNECGKVFR 23 (46)
T ss_dssp SSSEECSSSCCEES
T ss_pred CCCeECCCCCchhC
Confidence 45577888888773
No 317
>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.21 E-value=31 Score=18.23 Aligned_cols=13 Identities=23% Similarity=0.848 Sum_probs=9.5
Q ss_pred cccccccccccee
Q psy509 43 QRKHHCRACGQVF 55 (158)
Q Consensus 43 ~RkhhCr~CG~vf 55 (158)
.+.+.|..||+.|
T Consensus 10 ~k~~~C~~C~k~f 22 (46)
T 2em8_A 10 EKPYKCVECGKGY 22 (46)
T ss_dssp CCSEECSSSCCEE
T ss_pred CCCeECcccCchh
Confidence 3557788888877
No 318
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.17 E-value=31 Score=18.22 Aligned_cols=14 Identities=29% Similarity=0.937 Sum_probs=9.7
Q ss_pred ccccccccccceec
Q psy509 43 QRKHHCRACGQVFC 56 (158)
Q Consensus 43 ~RkhhCr~CG~vfC 56 (158)
.+.+.|..||+.|-
T Consensus 10 ~k~~~C~~C~k~f~ 23 (46)
T 2yto_A 10 EKPYKCSDCGKAFT 23 (46)
T ss_dssp CCCEECSSSCCEES
T ss_pred CCCEECcccCCccC
Confidence 35577888888773
No 319
>1x6a_A LIMK-2, LIM domain kinase 2; LIM-kinase 2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=22.16 E-value=1.3e+02 Score=18.35 Aligned_cols=15 Identities=20% Similarity=0.647 Sum_probs=10.8
Q ss_pred CceeeChhhHHHHhc
Q psy509 73 KEVRVCEDCHEKFTN 87 (158)
Q Consensus 73 ~~~RVC~~C~~~l~~ 87 (158)
.....|..||..+..
T Consensus 62 ~~~~~C~~c~~~~~~ 76 (81)
T 1x6a_A 62 HATLYCGKCHNEVVS 76 (81)
T ss_dssp SSCEEEHHHHHHHHC
T ss_pred CCEEECHHHHHHHhc
Confidence 345689999987654
No 320
>4b6d_A RAC GTPase-activating protein 1; signaling protein, cytokinesis, plasma membrane, phospholipi centralspindlin, spindle midzone, central spindle; 2.20A {Homo sapiens}
Probab=22.13 E-value=35 Score=20.83 Aligned_cols=30 Identities=23% Similarity=0.598 Sum_probs=21.1
Q ss_pred CCccccCccccccccccccccccceecCCC
Q psy509 30 DTCHRCRTTFSLVQRKHHCRACGQVFCQLC 59 (158)
Q Consensus 30 ~~C~~C~~~F~~~~RkhhCr~CG~vfC~~C 59 (158)
..|..|++.-.+.+.-..|+.|+-++=..|
T Consensus 20 ~~C~~Cg~~i~~gkq~~kC~dC~~~cH~~C 49 (61)
T 4b6d_A 20 ESCVPCGKRIKFGKLSLKCRDCRVVSHPEC 49 (61)
T ss_dssp EECTTTCCEECTTCEEEEESSSSCEECGGG
T ss_pred cccccccCEEEEeeEeeECCCCCCeEchhH
Confidence 578888877665456688999977653344
No 321
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.11 E-value=32 Score=18.21 Aligned_cols=14 Identities=36% Similarity=1.068 Sum_probs=10.0
Q ss_pred ccccccccccceec
Q psy509 43 QRKHHCRACGQVFC 56 (158)
Q Consensus 43 ~RkhhCr~CG~vfC 56 (158)
.+.+.|..||+.|-
T Consensus 10 ~~~~~C~~C~k~f~ 23 (46)
T 2em5_A 10 TKSHQCHECGRGFT 23 (46)
T ss_dssp SCSEECSSSCCEES
T ss_pred CCCeECCcCCCccC
Confidence 35577888888873
No 322
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.05 E-value=30 Score=18.25 Aligned_cols=13 Identities=31% Similarity=1.014 Sum_probs=9.0
Q ss_pred cccccccccccee
Q psy509 43 QRKHHCRACGQVF 55 (158)
Q Consensus 43 ~RkhhCr~CG~vf 55 (158)
.+.+.|..||+.|
T Consensus 10 ~k~~~C~~C~k~f 22 (46)
T 2epz_A 10 EKPFDCIDCGKAF 22 (46)
T ss_dssp CCSBCCTTTCCCB
T ss_pred CCCeECCCCCcee
Confidence 3556777777776
No 323
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.05 E-value=32 Score=17.92 Aligned_cols=13 Identities=23% Similarity=0.856 Sum_probs=9.2
Q ss_pred cccccccccccee
Q psy509 43 QRKHHCRACGQVF 55 (158)
Q Consensus 43 ~RkhhCr~CG~vf 55 (158)
.+.+.|..||+.|
T Consensus 8 ~k~~~C~~C~k~f 20 (44)
T 2emx_A 8 EKPFGCSCCEKAF 20 (44)
T ss_dssp CCCEECSSSSCEE
T ss_pred CcCccCCCCCccc
Confidence 3556788888777
No 324
>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.04 E-value=32 Score=18.15 Aligned_cols=13 Identities=38% Similarity=1.127 Sum_probs=9.3
Q ss_pred cccccccccccee
Q psy509 43 QRKHHCRACGQVF 55 (158)
Q Consensus 43 ~RkhhCr~CG~vf 55 (158)
.+.+.|..||+.|
T Consensus 10 ~~~~~C~~C~k~f 22 (46)
T 2ytk_A 10 EKPYKCNECGKVF 22 (46)
T ss_dssp SCSEECSSSCCEE
T ss_pred CCCEeCCcCCCcc
Confidence 3556788888877
No 325
>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.01 E-value=32 Score=18.20 Aligned_cols=13 Identities=31% Similarity=1.157 Sum_probs=9.2
Q ss_pred cccccccccccee
Q psy509 43 QRKHHCRACGQVF 55 (158)
Q Consensus 43 ~RkhhCr~CG~vf 55 (158)
.+.+.|..||+.|
T Consensus 10 ~k~~~C~~C~k~f 22 (46)
T 2em2_A 10 EKPFKCKECGKAF 22 (46)
T ss_dssp CCSEECSSSCCEE
T ss_pred CCCEECCcCCchh
Confidence 3556788888777
No 326
>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A
Probab=22.01 E-value=30 Score=16.39 Aligned_cols=10 Identities=40% Similarity=1.075 Sum_probs=5.8
Q ss_pred cccc--ccccee
Q psy509 46 HHCR--ACGQVF 55 (158)
Q Consensus 46 hhCr--~CG~vf 55 (158)
+.|. .||+.|
T Consensus 3 ~~C~~~~C~k~f 14 (31)
T 1sp2_A 3 FMCTWSYCGKRF 14 (31)
T ss_dssp CBCCSTTCCCBC
T ss_pred cCCcCCCCCccc
Confidence 4455 666655
No 327
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.94 E-value=31 Score=18.25 Aligned_cols=13 Identities=38% Similarity=0.984 Sum_probs=9.5
Q ss_pred cccccccccccee
Q psy509 43 QRKHHCRACGQVF 55 (158)
Q Consensus 43 ~RkhhCr~CG~vf 55 (158)
.+.+.|..||+.|
T Consensus 10 ~k~~~C~~C~k~F 22 (46)
T 2eoo_A 10 ERPYGCNECGKNF 22 (46)
T ss_dssp CCCEECSSSCCEE
T ss_pred CCCEEccccCccc
Confidence 3557788888877
No 328
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.89 E-value=30 Score=18.31 Aligned_cols=14 Identities=29% Similarity=0.859 Sum_probs=9.1
Q ss_pred ccccccccccceec
Q psy509 43 QRKHHCRACGQVFC 56 (158)
Q Consensus 43 ~RkhhCr~CG~vfC 56 (158)
.+.+.|..||+.|-
T Consensus 10 ~k~~~C~~C~k~f~ 23 (46)
T 2em6_A 10 EKCYKCDVCGKEFS 23 (46)
T ss_dssp CCCCBCSSSCCBCS
T ss_pred CCCeECCCCCcccC
Confidence 34566777777663
No 329
>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.83 E-value=27 Score=18.55 Aligned_cols=14 Identities=29% Similarity=0.952 Sum_probs=10.0
Q ss_pred ccccccccccceec
Q psy509 43 QRKHHCRACGQVFC 56 (158)
Q Consensus 43 ~RkhhCr~CG~vfC 56 (158)
.+.+.|..||+.|-
T Consensus 10 ~k~~~C~~C~k~f~ 23 (46)
T 2eoz_A 10 EKPYSCNVCGKAFV 23 (46)
T ss_dssp CCSEEETTTTEEES
T ss_pred CCCeECcccChhhC
Confidence 35577888888773
No 330
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.81 E-value=32 Score=18.17 Aligned_cols=14 Identities=29% Similarity=0.954 Sum_probs=9.8
Q ss_pred ccccccccccceec
Q psy509 43 QRKHHCRACGQVFC 56 (158)
Q Consensus 43 ~RkhhCr~CG~vfC 56 (158)
.+.+.|..||+.|-
T Consensus 10 ~k~~~C~~C~k~F~ 23 (46)
T 2emf_A 10 GKHFECTECGKAFT 23 (46)
T ss_dssp SCCEECSSSCCEES
T ss_pred CCCeECCCCCchhC
Confidence 35577888888773
No 331
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.81 E-value=30 Score=18.27 Aligned_cols=13 Identities=38% Similarity=1.122 Sum_probs=8.9
Q ss_pred cccccccccccee
Q psy509 43 QRKHHCRACGQVF 55 (158)
Q Consensus 43 ~RkhhCr~CG~vf 55 (158)
.+.+.|..||+.|
T Consensus 10 ~k~~~C~~C~k~F 22 (46)
T 2ytn_A 10 KKPYKCNECGKVF 22 (46)
T ss_dssp CSSCBCTTTCCBC
T ss_pred CcCeECCCCCCee
Confidence 3556777777776
No 332
>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A
Probab=21.75 E-value=36 Score=20.25 Aligned_cols=7 Identities=29% Similarity=0.899 Sum_probs=3.4
Q ss_pred cccCccc
Q psy509 33 HRCRTTF 39 (158)
Q Consensus 33 ~~C~~~F 39 (158)
..|++.|
T Consensus 7 ~~C~~~f 13 (85)
T 2j7j_A 7 ENCGKAF 13 (85)
T ss_dssp TTCCCEE
T ss_pred CCCCccc
Confidence 4455544
No 333
>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.74 E-value=27 Score=18.43 Aligned_cols=14 Identities=36% Similarity=0.928 Sum_probs=10.1
Q ss_pred ccccccccccceec
Q psy509 43 QRKHHCRACGQVFC 56 (158)
Q Consensus 43 ~RkhhCr~CG~vfC 56 (158)
.+.+-|..||+.|-
T Consensus 10 ~k~~~C~~C~k~F~ 23 (45)
T 2epu_A 10 QKPFECTHCGKSFR 23 (45)
T ss_dssp CCSEEETTTTEEES
T ss_pred CcCccCCCCCCccC
Confidence 35577888888873
No 334
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.73 E-value=29 Score=18.36 Aligned_cols=13 Identities=23% Similarity=0.902 Sum_probs=9.2
Q ss_pred cccccccccccee
Q psy509 43 QRKHHCRACGQVF 55 (158)
Q Consensus 43 ~RkhhCr~CG~vf 55 (158)
.+.+.|..||+.|
T Consensus 10 ~k~~~C~~C~k~F 22 (46)
T 2elz_A 10 EKPYKCEDCGKGY 22 (46)
T ss_dssp CSSCBCSSSCCBC
T ss_pred CCCeeCcccCchh
Confidence 3556788888776
No 335
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}
Probab=21.71 E-value=38 Score=20.96 Aligned_cols=26 Identities=19% Similarity=0.697 Sum_probs=15.4
Q ss_pred CCccc--cCcccc---cc---------ccccccc--ccccee
Q psy509 30 DTCHR--CRTTFS---LV---------QRKHHCR--ACGQVF 55 (158)
Q Consensus 30 ~~C~~--C~~~F~---~~---------~RkhhCr--~CG~vf 55 (158)
-.|.. |++.|. .+ .+.+.|. .||..|
T Consensus 16 ~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f 57 (100)
T 2ebt_A 16 HYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRF 57 (100)
T ss_dssp EECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEE
T ss_pred eEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCcc
Confidence 35775 888884 11 2345665 477766
No 336
>3j20_P 30S ribosomal protein S14P type Z; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=21.66 E-value=84 Score=19.08 Aligned_cols=22 Identities=14% Similarity=0.431 Sum_probs=13.9
Q ss_pred CccccCCCCCCCceeeChhhHHHHhc
Q psy509 62 KSTSLPKFGIEKEVRVCEDCHEKFTN 87 (158)
Q Consensus 62 ~~~~lp~~~~~~~~RVC~~C~~~l~~ 87 (158)
....+..+|+ -+|..|+..+..
T Consensus 27 ~~g~iRkfGL----~~cR~cfRe~A~ 48 (56)
T 3j20_P 27 YGPIIRIQGL----MLCRHCFREVAP 48 (56)
T ss_dssp SSSCCCTTTC----CCCHHHHHHHHH
T ss_pred CcccccccCC----hHHHHHHHHHHH
Confidence 4455566663 468888877654
No 337
>2kn9_A Rubredoxin; metalloprotein, ssgcid, structural genomics, seattle structural genomics center for infectious electron transport, iron; NMR {Mycobacterium tuberculosis}
Probab=21.63 E-value=27 Score=22.93 Aligned_cols=15 Identities=20% Similarity=0.567 Sum_probs=12.2
Q ss_pred ccccccccccceecC
Q psy509 43 QRKHHCRACGQVFCQ 57 (158)
Q Consensus 43 ~RkhhCr~CG~vfC~ 57 (158)
..++.|+.||.|+=.
T Consensus 25 m~~y~C~vCGyvYD~ 39 (81)
T 2kn9_A 25 YKLFRCIQCGFEYDE 39 (81)
T ss_dssp CCEEEETTTCCEEET
T ss_pred cceEEeCCCCEEEcC
Confidence 367999999999854
No 338
>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.63 E-value=29 Score=18.41 Aligned_cols=12 Identities=25% Similarity=0.930 Sum_probs=7.8
Q ss_pred ccccccccccee
Q psy509 44 RKHHCRACGQVF 55 (158)
Q Consensus 44 RkhhCr~CG~vf 55 (158)
+.+.|..||+.|
T Consensus 11 k~~~C~~C~k~f 22 (46)
T 2eoh_A 11 KPYECKECRKTF 22 (46)
T ss_dssp CSCCCSSSCCCC
T ss_pred CCcCCCCcCchh
Confidence 456677777765
No 339
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.59 E-value=33 Score=18.08 Aligned_cols=14 Identities=29% Similarity=0.869 Sum_probs=9.8
Q ss_pred ccccccccccceec
Q psy509 43 QRKHHCRACGQVFC 56 (158)
Q Consensus 43 ~RkhhCr~CG~vfC 56 (158)
.+.+.|..||+.|-
T Consensus 10 ~k~~~C~~C~k~f~ 23 (46)
T 2ytj_A 10 EKPYICAECGKAFT 23 (46)
T ss_dssp CCSEECSSSCCEES
T ss_pred CcCeECCCCChhhC
Confidence 35577888888773
No 340
>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=21.58 E-value=31 Score=16.37 Aligned_cols=12 Identities=33% Similarity=0.933 Sum_probs=7.5
Q ss_pred cccccc--ccccee
Q psy509 44 RKHHCR--ACGQVF 55 (158)
Q Consensus 44 RkhhCr--~CG~vf 55 (158)
|.+.|. .||+.|
T Consensus 2 k~~~C~~~~C~k~f 15 (32)
T 1zfd_A 2 RPYSCDHPGCDKAF 15 (32)
T ss_dssp CSBCCCCTTCCCCB
T ss_pred CCCcCcCCCCCCcc
Confidence 345666 677766
No 341
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.57 E-value=32 Score=18.15 Aligned_cols=14 Identities=29% Similarity=0.978 Sum_probs=9.9
Q ss_pred ccccccccccceec
Q psy509 43 QRKHHCRACGQVFC 56 (158)
Q Consensus 43 ~RkhhCr~CG~vfC 56 (158)
.+.+.|..||+.|-
T Consensus 10 ~k~~~C~~C~k~F~ 23 (46)
T 2en3_A 10 EKPFQCKECGMNFS 23 (46)
T ss_dssp CCSEECSSSCCEES
T ss_pred CCCeeCcccChhhC
Confidence 35577888888773
No 342
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.54 E-value=27 Score=18.39 Aligned_cols=13 Identities=31% Similarity=1.042 Sum_probs=9.2
Q ss_pred cccccccccccee
Q psy509 43 QRKHHCRACGQVF 55 (158)
Q Consensus 43 ~RkhhCr~CG~vf 55 (158)
.+.+.|..||+.|
T Consensus 10 ~k~~~C~~C~k~f 22 (46)
T 2ytr_A 10 EKPYKCNECGKAF 22 (46)
T ss_dssp CCTTCCTTTCCCC
T ss_pred CcCcCCCCCCCcc
Confidence 3556788888776
No 343
>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.49 E-value=26 Score=18.51 Aligned_cols=13 Identities=31% Similarity=1.032 Sum_probs=9.0
Q ss_pred cccccccccccee
Q psy509 43 QRKHHCRACGQVF 55 (158)
Q Consensus 43 ~RkhhCr~CG~vf 55 (158)
.+.+.|..||+.|
T Consensus 10 ~k~~~C~~C~k~f 22 (46)
T 2eq3_A 10 EKPYECNQCGKAF 22 (46)
T ss_dssp CCSSEETTTTEEC
T ss_pred CCCeECCCCChhh
Confidence 3556777787776
No 344
>2co8_A NEDD9 interacting protein with calponin homology and LIM domains; zinc finger protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=21.45 E-value=1.1e+02 Score=19.05 Aligned_cols=18 Identities=28% Similarity=0.444 Sum_probs=12.6
Q ss_pred CCCcccCCCccccCcccc
Q psy509 23 APEWMDGDTCHRCRTTFS 40 (158)
Q Consensus 23 ~p~W~~~~~C~~C~~~F~ 40 (158)
++.+.....|..|++...
T Consensus 9 ~~~~~~~~~C~~C~~~I~ 26 (82)
T 2co8_A 9 HQEAGAGDLCALCGEHLY 26 (82)
T ss_dssp CCCCCSSCBCSSSCCBCC
T ss_pred CcCCCCCCCCcccCCCcc
Confidence 444555678999998763
No 345
>2k2d_A Ring finger and CHY zinc finger domain- containing protein 1; zinc-binding protein, cytoplasm, metal-binding, nucleus, metal binding protein; NMR {Homo sapiens}
Probab=21.43 E-value=27 Score=22.67 Aligned_cols=12 Identities=17% Similarity=0.509 Sum_probs=9.3
Q ss_pred CCccccCccccc
Q psy509 30 DTCHRCRTTFSL 41 (158)
Q Consensus 30 ~~C~~C~~~F~~ 41 (158)
-.|..|+..|..
T Consensus 38 I~CnDC~~~s~v 49 (79)
T 2k2d_A 38 ILCNDCNGRSTV 49 (79)
T ss_dssp EEESSSCCEEEE
T ss_pred EECCCCCCCccC
Confidence 379999998863
No 346
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.38 E-value=33 Score=17.75 Aligned_cols=13 Identities=23% Similarity=0.843 Sum_probs=8.9
Q ss_pred cccccccccccee
Q psy509 43 QRKHHCRACGQVF 55 (158)
Q Consensus 43 ~RkhhCr~CG~vf 55 (158)
.+.+.|..||+.|
T Consensus 10 ~k~~~C~~C~k~f 22 (44)
T 2eof_A 10 EKPYECNECQKAF 22 (44)
T ss_dssp CCSEECTTTCCEE
T ss_pred CCCeECCCCCccc
Confidence 3456777777776
No 347
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.35 E-value=30 Score=18.21 Aligned_cols=13 Identities=46% Similarity=1.331 Sum_probs=9.3
Q ss_pred cccccccccccee
Q psy509 43 QRKHHCRACGQVF 55 (158)
Q Consensus 43 ~RkhhCr~CG~vf 55 (158)
.+.+.|..||+.|
T Consensus 10 ~~~~~C~~C~k~f 22 (46)
T 2eop_A 10 EKPHECRECGKSF 22 (46)
T ss_dssp CCSCBCTTTCCBC
T ss_pred CCCeeCCCCCchh
Confidence 3556788888776
No 348
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Probab=21.32 E-value=34 Score=17.98 Aligned_cols=14 Identities=21% Similarity=0.683 Sum_probs=9.9
Q ss_pred ccccccccccceec
Q psy509 43 QRKHHCRACGQVFC 56 (158)
Q Consensus 43 ~RkhhCr~CG~vfC 56 (158)
.+.+.|..||+.|-
T Consensus 10 ~k~~~C~~C~k~f~ 23 (46)
T 2el4_A 10 VKPYGCSQCAKTFS 23 (46)
T ss_dssp CCSEECSSSSCEES
T ss_pred CCceECCCCCchhC
Confidence 35577888888773
No 349
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.32 E-value=32 Score=18.05 Aligned_cols=15 Identities=33% Similarity=1.108 Sum_probs=10.6
Q ss_pred ccccccccccceecC
Q psy509 43 QRKHHCRACGQVFCQ 57 (158)
Q Consensus 43 ~RkhhCr~CG~vfC~ 57 (158)
.+.+.|..||+.|-.
T Consensus 10 ~k~~~C~~C~k~F~~ 24 (46)
T 2epw_A 10 EKPCKCTECGKAFCW 24 (46)
T ss_dssp CCSEECSSSCCEESS
T ss_pred CCCeeCCCCCCccCC
Confidence 355778888888743
No 350
>2yqq_A Zinc finger HIT domain-containing protein 3; structure genomics, ZF-HIT domain, TRIP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.30 E-value=46 Score=20.27 Aligned_cols=23 Identities=30% Similarity=0.693 Sum_probs=17.9
Q ss_pred CCccccCccccccccccccccccceecC
Q psy509 30 DTCHRCRTTFSLVQRKHHCRACGQVFCQ 57 (158)
Q Consensus 30 ~~C~~C~~~F~~~~RkhhCr~CG~vfC~ 57 (158)
..|.+|+. + -++.|..|+.-+|+
T Consensus 13 ~~C~vC~~-~----~kY~CPrC~~~yCS 35 (56)
T 2yqq_A 13 VVCVICLE-K----PKYRCPACRVPYCS 35 (56)
T ss_dssp CCCTTTCS-C----CSEECTTTCCEESS
T ss_pred CccCcCcC-C----CeeeCCCCCCCeeC
Confidence 36888887 3 46789999998887
No 351
>1nee_A EIF-2-beta, probable translation initiation factor 2 beta subunit; two domain protein, mixed alpha-beta structure; NMR {Methanothermobacterthermautotrophicus} SCOP: d.241.1.1 g.59.1.1
Probab=21.24 E-value=31 Score=24.85 Aligned_cols=23 Identities=35% Similarity=0.895 Sum_probs=16.4
Q ss_pred CccccCccccccccc-----cccccccc
Q psy509 31 TCHRCRTTFSLVQRK-----HHCRACGQ 53 (158)
Q Consensus 31 ~C~~C~~~F~~~~Rk-----hhCr~CG~ 53 (158)
.|..|+.+-+.+.++ .+|..||.
T Consensus 104 lC~~C~sPdT~l~k~~r~~~l~C~ACGa 131 (138)
T 1nee_A 104 ICHECNRPDTRIIREGRISLLKCEACGA 131 (138)
T ss_dssp HHTCCSSCSSCCEEETTTTEEECSTTSC
T ss_pred ECCCCCCcCcEEEEcCCeEEEEccCCCC
Confidence 599999988877654 35666665
No 352
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.21 E-value=31 Score=18.19 Aligned_cols=12 Identities=42% Similarity=1.074 Sum_probs=7.9
Q ss_pred ccccccccccee
Q psy509 44 RKHHCRACGQVF 55 (158)
Q Consensus 44 RkhhCr~CG~vf 55 (158)
+.+-|..||+.|
T Consensus 11 k~~~C~~C~k~f 22 (46)
T 2emg_A 11 NPFICSECGKVF 22 (46)
T ss_dssp CSCBCTTTCCBC
T ss_pred CCEECCccCccc
Confidence 456677777766
No 353
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.19 E-value=32 Score=18.21 Aligned_cols=13 Identities=31% Similarity=0.979 Sum_probs=8.8
Q ss_pred cccccccccccee
Q psy509 43 QRKHHCRACGQVF 55 (158)
Q Consensus 43 ~RkhhCr~CG~vf 55 (158)
.+.+.|..||+.|
T Consensus 10 ~k~~~C~~C~k~f 22 (46)
T 2ytq_A 10 EKPYGCSECGKAF 22 (46)
T ss_dssp CCSCBCSSSCCBC
T ss_pred CCCcCCCccChhh
Confidence 3556777777766
No 354
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.16 E-value=34 Score=18.02 Aligned_cols=14 Identities=29% Similarity=0.956 Sum_probs=9.8
Q ss_pred ccccccccccceec
Q psy509 43 QRKHHCRACGQVFC 56 (158)
Q Consensus 43 ~RkhhCr~CG~vfC 56 (158)
.+.+.|..||+.|-
T Consensus 10 ~k~~~C~~C~k~f~ 23 (46)
T 2eml_A 10 EKPYECSVCGKAFS 23 (46)
T ss_dssp CCSEECSSSCCEES
T ss_pred CCCeeCCCcCCccC
Confidence 35567888888773
No 355
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.14 E-value=32 Score=18.11 Aligned_cols=14 Identities=36% Similarity=0.928 Sum_probs=10.0
Q ss_pred ccccccccccceec
Q psy509 43 QRKHHCRACGQVFC 56 (158)
Q Consensus 43 ~RkhhCr~CG~vfC 56 (158)
.+.+.|..||+.|-
T Consensus 10 ~k~~~C~~C~k~F~ 23 (46)
T 2emh_A 10 ERPYICTVCGKAFT 23 (46)
T ss_dssp CCSEECTTTCCEES
T ss_pred CCCcCCCCCCchhC
Confidence 35677888888773
No 356
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.13 E-value=34 Score=17.96 Aligned_cols=13 Identities=31% Similarity=0.904 Sum_probs=9.4
Q ss_pred cccccccccccee
Q psy509 43 QRKHHCRACGQVF 55 (158)
Q Consensus 43 ~RkhhCr~CG~vf 55 (158)
.+.+.|..||+.|
T Consensus 10 ~k~~~C~~C~k~f 22 (46)
T 2eme_A 10 EKPYVCDYCGKAF 22 (46)
T ss_dssp CCSEECSSSCCEE
T ss_pred CCCeECCCCChhh
Confidence 3557788888877
No 357
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}
Probab=21.10 E-value=34 Score=18.06 Aligned_cols=14 Identities=21% Similarity=0.619 Sum_probs=9.9
Q ss_pred ccccccccccceec
Q psy509 43 QRKHHCRACGQVFC 56 (158)
Q Consensus 43 ~RkhhCr~CG~vfC 56 (158)
.+.+.|..||+.|-
T Consensus 10 ~k~~~C~~C~k~f~ 23 (46)
T 2el6_A 10 VNPYKCSQCEKSFS 23 (46)
T ss_dssp CCSEECSSSSCEES
T ss_pred CCCeECCCCCcccC
Confidence 35577888888773
No 358
>2d74_B Translation initiation factor 2 beta subunit; protein complex; 2.80A {Pyrococcus furiosus} PDB: 2dcu_B*
Probab=20.95 E-value=42 Score=24.43 Aligned_cols=23 Identities=26% Similarity=0.758 Sum_probs=15.7
Q ss_pred CccccCccccccccc-----cccccccc
Q psy509 31 TCHRCRTTFSLVQRK-----HHCRACGQ 53 (158)
Q Consensus 31 ~C~~C~~~F~~~~Rk-----hhCr~CG~ 53 (158)
.|..|+.+-+.+.++ ..|..||.
T Consensus 106 lC~~C~sPdT~L~k~~r~~~l~C~ACGa 133 (148)
T 2d74_B 106 ICPVCGSPDTKIIKRDRFHFLKCEACGA 133 (148)
T ss_dssp SCSSSCCTTCCCCBSSSSBCCCCSSSCC
T ss_pred ECCCCCCcCcEEEEeCCEEEEEecCCCC
Confidence 699999988877654 24555554
No 359
>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.93 E-value=35 Score=17.99 Aligned_cols=13 Identities=31% Similarity=0.912 Sum_probs=9.2
Q ss_pred cccccccccccee
Q psy509 43 QRKHHCRACGQVF 55 (158)
Q Consensus 43 ~RkhhCr~CG~vf 55 (158)
.+.+.|..||+.|
T Consensus 10 ~k~~~C~~C~k~f 22 (46)
T 2emp_A 10 VKPYMCNECGKAF 22 (46)
T ss_dssp CCSEECSSSCCEE
T ss_pred CcCeECCCCCchh
Confidence 3556788888777
No 360
>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.92 E-value=29 Score=18.14 Aligned_cols=13 Identities=31% Similarity=1.019 Sum_probs=9.4
Q ss_pred cccccccccceec
Q psy509 44 RKHHCRACGQVFC 56 (158)
Q Consensus 44 RkhhCr~CG~vfC 56 (158)
+.+.|..||..|-
T Consensus 11 ~~~~C~~C~k~F~ 23 (44)
T 2eox_A 11 KSYNCNECGKAFT 23 (44)
T ss_dssp CCEEETTTTEEES
T ss_pred CCeECcccCcccC
Confidence 5567888888773
No 361
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.91 E-value=32 Score=18.10 Aligned_cols=13 Identities=31% Similarity=0.963 Sum_probs=9.2
Q ss_pred cccccccccccee
Q psy509 43 QRKHHCRACGQVF 55 (158)
Q Consensus 43 ~RkhhCr~CG~vf 55 (158)
.+.+.|..||+.|
T Consensus 10 ~k~~~C~~C~k~F 22 (47)
T 2epx_A 10 KKPYECIECGKAF 22 (47)
T ss_dssp CCSBCCSSSCCCB
T ss_pred CCCEECCccCchh
Confidence 3556788888776
No 362
>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.83 E-value=26 Score=18.26 Aligned_cols=14 Identities=36% Similarity=0.928 Sum_probs=9.6
Q ss_pred ccccccccccceec
Q psy509 43 QRKHHCRACGQVFC 56 (158)
Q Consensus 43 ~RkhhCr~CG~vfC 56 (158)
.+.+.|..||+.|-
T Consensus 10 ~k~~~C~~C~k~f~ 23 (44)
T 2eoj_A 10 ENPYECCECGKVFS 23 (44)
T ss_dssp CCSCEETTTTEECS
T ss_pred CcCeeCCCCCCccC
Confidence 35567888887763
No 363
>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.82 E-value=30 Score=18.30 Aligned_cols=12 Identities=42% Similarity=1.101 Sum_probs=7.6
Q ss_pred ccccccccccee
Q psy509 44 RKHHCRACGQVF 55 (158)
Q Consensus 44 RkhhCr~CG~vf 55 (158)
+.+.|..||+.|
T Consensus 11 k~~~C~~C~k~f 22 (46)
T 2emz_A 11 RPFKCNECGKGF 22 (46)
T ss_dssp CSCCCSSSCCCC
T ss_pred CCeECCCCCccc
Confidence 456677776665
No 364
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.82 E-value=34 Score=18.00 Aligned_cols=15 Identities=27% Similarity=0.875 Sum_probs=10.6
Q ss_pred ccccccccccceecC
Q psy509 43 QRKHHCRACGQVFCQ 57 (158)
Q Consensus 43 ~RkhhCr~CG~vfC~ 57 (158)
.+.+.|..||+.|-.
T Consensus 10 ~~~~~C~~C~k~f~~ 24 (46)
T 2ytg_A 10 EKPFKCGECGKSYNQ 24 (46)
T ss_dssp CCSEECTTTCCEESS
T ss_pred CCCeECCCCCcccCC
Confidence 356778888888743
No 365
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.77 E-value=34 Score=17.97 Aligned_cols=13 Identities=46% Similarity=1.275 Sum_probs=9.6
Q ss_pred cccccccccccee
Q psy509 43 QRKHHCRACGQVF 55 (158)
Q Consensus 43 ~RkhhCr~CG~vf 55 (158)
.+.+.|..||+.|
T Consensus 10 ~k~~~C~~C~k~f 22 (46)
T 2emm_A 10 ERPHKCNECGKSF 22 (46)
T ss_dssp CCSEECSSSCCEE
T ss_pred CCCeeCCCCChhh
Confidence 3557788888877
No 366
>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.75 E-value=30 Score=18.26 Aligned_cols=13 Identities=31% Similarity=0.989 Sum_probs=9.4
Q ss_pred cccccccccccee
Q psy509 43 QRKHHCRACGQVF 55 (158)
Q Consensus 43 ~RkhhCr~CG~vf 55 (158)
.+.+.|..||+.|
T Consensus 10 ~~~~~C~~C~k~f 22 (46)
T 2en6_A 10 EKPYGCNECGKTF 22 (46)
T ss_dssp SCCEEETTTTEEE
T ss_pred CcCeECCCCCccc
Confidence 3557788888877
No 367
>3irb_A Uncharacterized protein from DUF35 family; 13815350, protein with unknown function from DUF35 family, S genomics; 1.80A {Sulfolobus solfataricus}
Probab=20.68 E-value=32 Score=24.60 Aligned_cols=9 Identities=33% Similarity=1.257 Sum_probs=5.0
Q ss_pred cccccccce
Q psy509 46 HHCRACGQV 54 (158)
Q Consensus 46 hhCr~CG~v 54 (158)
.+|..||.+
T Consensus 48 ~rC~~CG~~ 56 (145)
T 3irb_A 48 SKCSKCGRI 56 (145)
T ss_dssp EECTTTCCE
T ss_pred EEeCCCCcE
Confidence 446666655
No 368
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.55 E-value=31 Score=18.33 Aligned_cols=12 Identities=33% Similarity=1.027 Sum_probs=8.0
Q ss_pred ccccccccccee
Q psy509 44 RKHHCRACGQVF 55 (158)
Q Consensus 44 RkhhCr~CG~vf 55 (158)
+.+.|..||+.|
T Consensus 11 k~~~C~~C~k~f 22 (46)
T 2ytm_A 11 KPYKCMECGKAF 22 (46)
T ss_dssp CSSSBTTTTBCC
T ss_pred CCcCCCCCCchh
Confidence 456677777766
No 369
>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.52 E-value=29 Score=18.30 Aligned_cols=15 Identities=33% Similarity=0.955 Sum_probs=10.7
Q ss_pred ccccccccccceecC
Q psy509 43 QRKHHCRACGQVFCQ 57 (158)
Q Consensus 43 ~RkhhCr~CG~vfC~ 57 (158)
.+.+.|..||+.|-.
T Consensus 10 ~~~~~C~~C~k~f~~ 24 (46)
T 2en1_A 10 EKPFKCEECGKRFTQ 24 (46)
T ss_dssp CCSEEETTTTEEESS
T ss_pred CCCeeCCCCCcccCC
Confidence 456778888888743
No 370
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.07 E-value=37 Score=17.86 Aligned_cols=13 Identities=31% Similarity=0.976 Sum_probs=9.2
Q ss_pred cccccccccccee
Q psy509 43 QRKHHCRACGQVF 55 (158)
Q Consensus 43 ~RkhhCr~CG~vf 55 (158)
.+.+.|..||+.|
T Consensus 10 ~k~~~C~~C~k~f 22 (46)
T 2ep2_A 10 EKPYECSICGKSF 22 (46)
T ss_dssp CCSEECSSSCCEE
T ss_pred CcCcCCCCCCccc
Confidence 3556788888777
No 371
>2js4_A UPF0434 protein BB2007; NESG, northeast structural genomics consortium, beta, PSI-2, protein structure initiative; NMR {Bordetella bronchiseptica RB50}
Probab=20.06 E-value=36 Score=21.53 Aligned_cols=14 Identities=14% Similarity=0.370 Sum_probs=9.7
Q ss_pred CCCccccCcccccc
Q psy509 29 GDTCHRCRTTFSLV 42 (158)
Q Consensus 29 ~~~C~~C~~~F~~~ 42 (158)
.-.|..|+.+..+-
T Consensus 8 iL~CP~ck~~L~~~ 21 (70)
T 2js4_A 8 ILVCPVCKGRLEFQ 21 (70)
T ss_dssp CCBCTTTCCBEEEE
T ss_pred heECCCCCCcCEEe
Confidence 44788888876543
No 372
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Probab=20.06 E-value=43 Score=22.74 Aligned_cols=10 Identities=40% Similarity=0.680 Sum_probs=6.2
Q ss_pred CccccCcccc
Q psy509 31 TCHRCRTTFS 40 (158)
Q Consensus 31 ~C~~C~~~F~ 40 (158)
.|..|++.|.
T Consensus 27 ~C~~C~~~f~ 36 (155)
T 2rpc_A 27 PKKSCDRTFS 36 (155)
T ss_dssp SCCCCCCCBS
T ss_pred ccccCCcccC
Confidence 5666666663
No 373
>1v6g_A Actin binding LIM protein 2; LIM domain, zinc binding domain, ablim2, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=20.06 E-value=49 Score=20.45 Aligned_cols=13 Identities=15% Similarity=0.475 Sum_probs=9.2
Q ss_pred eeeChhhHHHHhc
Q psy509 75 VRVCEDCHEKFTN 87 (158)
Q Consensus 75 ~RVC~~C~~~l~~ 87 (158)
.-.|..||..+..
T Consensus 63 ~~~C~~C~~~~~~ 75 (81)
T 1v6g_A 63 ECMCQKCSLPVSV 75 (81)
T ss_dssp EEEEHHHHSCCSS
T ss_pred CEEChhhhcccCC
Confidence 3479999976554
Done!