Query psy5091
Match_columns 112
No_of_seqs 102 out of 123
Neff 5.1
Searched_HMMs 46136
Date Fri Aug 16 17:05:53 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5091.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/5091hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4624|consensus 100.0 4E-41 8.7E-46 234.9 10.6 101 1-101 3-103 (104)
2 PF08583 Cmc1: Cytochrome c ox 99.8 4.8E-19 1.1E-23 113.4 5.2 69 18-87 1-69 (69)
3 PF06747 CHCH: CHCH domain; I 95.6 0.017 3.8E-07 32.1 3.0 34 31-65 1-34 (35)
4 PF07802 GCK: GCK domain; Int 94.5 0.058 1.3E-06 36.2 3.5 38 30-67 13-54 (76)
5 KOG4148|consensus 91.9 0.46 1E-05 33.5 5.0 59 29-89 11-70 (106)
6 PF10200 Ndufs5: NADH:ubiquino 91.7 0.28 6.2E-06 34.2 3.8 38 30-67 32-70 (96)
7 KOG4090|consensus 89.3 0.44 9.6E-06 36.0 3.2 38 30-68 117-154 (157)
8 KOG4695|consensus 86.2 2.1 4.5E-05 31.0 4.9 66 2-74 16-89 (122)
9 PF05676 NDUF_B7: NADH-ubiquin 72.5 2.6 5.6E-05 27.5 1.6 36 29-65 20-55 (66)
10 PF11326 DUF3128: Protein of u 68.9 20 0.00043 23.7 5.3 59 30-89 6-71 (84)
11 KOG3458|consensus 62.2 7.5 0.00016 29.6 2.5 38 30-67 77-114 (170)
12 KOG4114|consensus 59.7 21 0.00046 23.8 4.0 55 31-89 5-67 (73)
13 PF02297 COX6B: Cytochrome oxi 55.9 15 0.00031 23.9 2.8 40 29-68 10-58 (76)
14 PF08991 DUF1903: Domain of un 55.8 12 0.00025 24.4 2.3 48 53-100 4-58 (67)
15 KOG4149|consensus 54.1 19 0.00041 26.4 3.4 39 30-68 69-108 (129)
16 PF05051 COX17: Cytochrome C o 49.2 9.3 0.0002 23.7 1.0 21 29-49 29-49 (49)
17 KOG4110|consensus 42.0 24 0.00052 25.5 2.3 20 24-44 53-72 (120)
18 PF05254 UPF0203: Uncharacteri 37.7 23 0.00049 23.0 1.5 20 49-68 5-24 (68)
19 KOG4110|consensus 33.6 30 0.00065 25.0 1.7 36 31-66 36-72 (120)
20 PF12295 Symplekin_C: Sympleki 29.5 87 0.0019 23.6 3.7 35 7-44 124-158 (183)
21 PHA03155 hypothetical protein; 28.4 40 0.00087 24.3 1.6 20 2-21 35-54 (115)
22 KOG2192|consensus 28.2 54 0.0012 27.5 2.6 36 29-65 150-185 (390)
23 KOG3496|consensus 27.8 47 0.001 22.1 1.8 22 28-49 51-72 (72)
24 KOG4695|consensus 25.2 2E+02 0.0043 20.9 4.7 42 50-92 45-94 (122)
25 PF15551 DUF4656: Domain of un 24.8 95 0.0021 26.4 3.4 69 2-77 198-266 (370)
26 PF10203 Pet191_N: Cytochrome 23.7 57 0.0012 21.1 1.6 32 30-67 4-36 (68)
27 PF07182 DUF1402: Protein of u 23.1 42 0.00091 27.7 1.1 20 37-56 126-145 (303)
28 PRK12355 conjugal transfer mat 22.7 19 0.0004 32.1 -1.1 32 30-61 418-452 (558)
29 PF09889 DUF2116: Uncharacteri 22.5 1.1E+02 0.0023 19.4 2.7 22 70-91 16-38 (59)
30 PLN03079 Uncharacterized prote 22.3 76 0.0017 22.0 2.1 39 30-68 17-62 (91)
31 PF15540 Toxin_62: Putative to 21.4 40 0.00086 24.2 0.5 14 86-99 28-41 (113)
32 KOG4138|consensus 20.2 92 0.002 21.7 2.1 18 51-68 41-58 (96)
No 1
>KOG4624|consensus
Probab=100.00 E-value=4e-41 Score=234.87 Aligned_cols=101 Identities=44% Similarity=0.776 Sum_probs=98.5
Q ss_pred CCCCCchhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhccCcceeeeccHHHHHHHHHHHHHhcCCHHHHHHHHHH
Q psy5091 1 MGDPNDKTLRKLEKDVLIEQMMRDIARTEKCAEFTEALEKCGRDNGWKGVFTCRKENEKMKECMAHWYHNEDFRKEVTEM 80 (112)
Q Consensus 1 ~gdp~d~~Lr~vE~dvlIpk~mrerar~e~C~~~vk~Fa~C~k~~g~~~~~~CR~e~~amk~Cl~~~~~d~ef~ee~k~e 80 (112)
+|||+|.+|||||+||+||++|+.+|.++.|+++|.+|++||+++|++|+|+||+|+.+||+||++||+||.|+++||++
T Consensus 3 ~~dped~~lr~ve~~v~ip~rmn~kakt~~C~~~v~~~a~C~k~~~v~vv~TCrkq~~elk~Cl~~~~~D~af~e~~rd~ 82 (104)
T KOG4624|consen 3 LGDPEDLRLRKVEKDVEIPKRMNLKAKTEKCSEFVQDFADCAKASGVSVVPTCRKQNSELKECLTQYYNDEAFLEECRDE 82 (104)
T ss_pred CCCHhhhhHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeehhhHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 68999999999999999999999999988999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCchHHHHHH
Q psy5091 81 YLQQRTDYRKTGLSKKMRKEL 101 (112)
Q Consensus 81 Yl~eR~e~r~tgv~~~~~~~~ 101 (112)
||+||+++|.||||+++|.++
T Consensus 83 yv~Er~~~ratgi~~q~r~e~ 103 (104)
T KOG4624|consen 83 YVQERINKRATGIPKQSRLEK 103 (104)
T ss_pred HHHHHHHHHhccCchhhhhhc
Confidence 999999999999999999654
No 2
>PF08583 Cmc1: Cytochrome c oxidase biogenesis protein Cmc1 like; InterPro: IPR013892 Cmc1 is a metallo-chaperone like protein which is known to localise to the inner mitochondrial membrane in Saccharomyces cerevisiae. It is essential for full expression of cytochrome c oxidase and respiration []. Cmc1 contains two Cx9C motifs and is able to bind copper(I). Cmc1 is thought to play a role in mitochondrial copper trafficking and transfer to cytochrome c oxidase.
Probab=99.77 E-value=4.8e-19 Score=113.38 Aligned_cols=69 Identities=32% Similarity=0.621 Sum_probs=65.3
Q ss_pred HHHHHHHHHHHhhhHHHHHHHHhhhccCcceeeeccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH
Q psy5091 18 IEQMMRDIARTEKCAEFTEALEKCGRDNGWKGVFTCRKENEKMKECMAHWYHNEDFRKEVTEMYLQQRTD 87 (112)
Q Consensus 18 Ipk~mrerar~e~C~~~vk~Fa~C~k~~g~~~~~~CR~e~~amk~Cl~~~~~d~ef~ee~k~eYl~eR~e 87 (112)
||+.|++++.. .|.++|++|++|+++++++++|+|++++.+|++||..|++++.|.+.++.+|+++|+|
T Consensus 1 m~~~l~~~~~~-~C~~~i~~~~~C~~~~~~~~~~~C~~~~~~m~~Cl~~~~~~~~~~~~~~~~~~~~r~e 69 (69)
T PF08583_consen 1 MHPQLKEEAHK-KCADEIEAFAECHKDRTFKFVGKCREEKKAMNECLKEERNDERFRNREKAEYLKERIE 69 (69)
T ss_pred CChHHhHHHHH-HhHHHHHHHHHHHhcchHHHHHhhhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhcC
Confidence 46679999995 9999999999999999999999999999999999999999999999999999999975
No 3
>PF06747 CHCH: CHCH domain; InterPro: IPR010625 A conserved motif was identified in the LOC118487 protein was called the CHCH motif. Alignment of this protein with related members showed the presence of three subgroups of proteins, which are called the S (Small), N (N-terminal extended) and C (C-terminal extended) subgroups. All three sub-groups of proteins have in common that they contain a predicted conserved [coiled coil 1]-[helix 1]-[coiled coil 2]-[helix 2] domain (CHCH domain). Within each helix of the CHCH domain, there are two cysteines present in a C-X9-C motif. The N-group contains an additional double helix domain, and each helix contains the C-X9-C motif. This family contains a number of characterised proteins: Cox19 protein - a nuclear gene of Saccharomyces cerevisiae, codes for an 11 kDa protein (Cox19p) required for expression of cytochrome oxidase. Because cox19 mutants are able to synthesise the mitochondrial and nuclear gene products of cytochrome oxidase, Cox19p probably functions post-translationally during assembly of the enzyme. Cox19p is present in the cytoplasm and mitochondria, where it exists as a soluble intermembrane protein. This dual location is similar to what was previously reported for Cox17p, a low molecular weight copper protein thought to be required for maturation of the CuA centre of subunit 2 of cytochrome oxidase. Cox19p have four conserved potential metal ligands, these are three cysteines and one histidine. Mrp10 - belongs to the class of yeast mitochondrial ribosomal proteins that are essential for translation []. Eukaryotic NADH-ubiquinone oxidoreductase 19 kDa (NDUFA8) subunit []. The CHCH domain was previously called DUF657 []. ; PDB: 2ZXT_A 3A3C_A 2L0Y_A 2K3J_A.
Probab=95.60 E-value=0.017 Score=32.13 Aligned_cols=34 Identities=38% Similarity=0.641 Sum_probs=30.1
Q ss_pred hHHHHHHHHhhhccCcceeeeccHHHHHHHHHHHH
Q psy5091 31 CAEFTEALEKCGRDNGWKGVFTCRKENEKMKECMA 65 (112)
Q Consensus 31 C~~~vk~Fa~C~k~~g~~~~~~CR~e~~amk~Cl~ 65 (112)
|..+..+|..|-+.++.. ...|+++..++++|..
T Consensus 1 C~~e~~~~~~Cl~~n~~~-~~~C~~~~~~~~~C~~ 34 (35)
T PF06747_consen 1 CAEEMKAYLACLKENNFD-WSKCRKEFKAYKECRM 34 (35)
T ss_dssp THHHHHHHHHHHHCH-SS-TCCCHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHCCCc-HHhhHHHHHHHHHHhh
Confidence 889999999999999884 8899999999999974
No 4
>PF07802 GCK: GCK domain; InterPro: IPR012891 This domain is found in proteins carrying other domains known to be involved in intracellular signalling pathways (such as IPR001806 from INTERPRO) indicating that it might also be involved in these pathways. It has 4 highly conserved cysteine residues, suggesting that it can bind zinc ions. Moreover, it is found repeated in some members of this family (such as Q9LMF3 from SWISSPROT); this may indicate that these domains are able to interact with one another, raising the possibility that this domain mediates heterodimerisation.
Probab=94.46 E-value=0.058 Score=36.16 Aligned_cols=38 Identities=24% Similarity=0.427 Sum_probs=32.4
Q ss_pred hhHHHHHHHHhhh----ccCcceeeeccHHHHHHHHHHHHHh
Q psy5091 30 KCAEFTEALEKCG----RDNGWKGVFTCRKENEKMKECMAHW 67 (112)
Q Consensus 30 ~C~~~vk~Fa~C~----k~~g~~~~~~CR~e~~amk~Cl~~~ 67 (112)
-|.+...+|.+|. +++.-..+-+|.+...+|..||..|
T Consensus 13 ~Cke~F~awe~C~~ea~~~~~~d~v~kC~e~~~~L~kCM~ah 54 (76)
T PF07802_consen 13 GCKESFTAWEDCVDEAEKNKEEDFVEKCFEATAALRKCMEAH 54 (76)
T ss_pred ChhHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHhc
Confidence 5999999999999 3344467889999999999999975
No 5
>KOG4148|consensus
Probab=91.95 E-value=0.46 Score=33.52 Aligned_cols=59 Identities=20% Similarity=0.495 Sum_probs=44.3
Q ss_pred hhhHHHHHHHHhhhccCcceeee-ccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHH
Q psy5091 29 EKCAEFTEALEKCGRDNGWKGVF-TCRKENEKMKECMAHWYHNEDFRKEVTEMYLQQRTDYR 89 (112)
Q Consensus 29 e~C~~~vk~Fa~C~k~~g~~~~~-~CR~e~~amk~Cl~~~~~d~ef~ee~k~eYl~eR~e~r 89 (112)
++|.+.+.+.-+|-+.+.+.-+| -|.....+++.||+.-|-+.. .....+=+..|..--
T Consensus 11 ~~C~dlInaL~eCH~~~~~~kfFG~CN~~k~eL~kCLk~~~~nnk--~r~~~e~~~mRkkv~ 70 (106)
T KOG4148|consen 11 EECNDLINALKECHKNHNILKFFGYCNDVKRELRKCLKNEYVNNK--TRSREEGIAMRKKVF 70 (106)
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHHhhccHHHHHHHHHHHHHhhhH--HHHHHHHHHHHHHHH
Confidence 47999999999999999988888 799999999999986554432 233444444444433
No 6
>PF10200 Ndufs5: NADH:ubiquinone oxidoreductase, NDUFS5-15kDa; InterPro: IPR019342 Proteins in this entry form part of the NADH:ubiquinone oxidoreductase complex I. Complex I is the first multisubunit inner membrane protein complex of the mitochondrial electron transport chain and it transfers two electrons from NADH to ubiquinone. The mammalian complex I is composed of 45 different subunits. The proteins in this entry represent a component of the iron-sulphur (IP) fragment of the enzyme, that is not involved in catalysis. These proteins carry four highly conserved cysteine residues, but these do not appear to be in a configuration which would favour metal binding, so the exact function of the protein is uncertain [].
Probab=91.73 E-value=0.28 Score=34.21 Aligned_cols=38 Identities=29% Similarity=0.607 Sum_probs=33.1
Q ss_pred hhHHHHHHHHhhhccCcce-eeeccHHHHHHHHHHHHHh
Q psy5091 30 KCAEFTEALEKCGRDNGWK-GVFTCRKENEKMKECMAHW 67 (112)
Q Consensus 30 ~C~~~vk~Fa~C~k~~g~~-~~~~CR~e~~amk~Cl~~~ 67 (112)
.|.++.++|.+|+.+.|.. ..-.|+.+..-+.+||+..
T Consensus 32 RC~~FE~e~i~C~~~~G~~r~kKeC~~e~EDy~EClh~~ 70 (96)
T PF10200_consen 32 RCHPFEKEWIECAEAYGQTRGKKECKLELEDYYECLHHT 70 (96)
T ss_pred chHHHHHHHHHHHHHHcccchhhhchhHHhHHHHHHhhH
Confidence 6999999999999988754 4459999999999999863
No 7
>KOG4090|consensus
Probab=89.32 E-value=0.44 Score=35.97 Aligned_cols=38 Identities=21% Similarity=0.437 Sum_probs=32.7
Q ss_pred hhHHHHHHHHhhhccCcceeeeccHHHHHHHHHHHHHhc
Q psy5091 30 KCAEFTEALEKCGRDNGWKGVFTCRKENEKMKECMAHWY 68 (112)
Q Consensus 30 ~C~~~vk~Fa~C~k~~g~~~~~~CR~e~~amk~Cl~~~~ 68 (112)
-|.=+++.|.+|+.+++ +-+-.|.-.++.|+.|-..|.
T Consensus 117 ~C~~e~kqF~dCa~~~~-~d~slC~~f~e~Lk~Ck~~~~ 154 (157)
T KOG4090|consen 117 PCFIEIKQFLDCAQNQG-SDISLCEGYNEMLKQCKKNSG 154 (157)
T ss_pred chHHHHHHHHHHHHhcC-cchHHHHHHHHHHHHHHHHhc
Confidence 59999999999999974 345579999999999998775
No 8
>KOG4695|consensus
Probab=86.18 E-value=2.1 Score=31.01 Aligned_cols=66 Identities=20% Similarity=0.504 Sum_probs=48.3
Q ss_pred CCCCchhhhHHHHHHHHHHHHHHHHH--------HhhhHHHHHHHHhhhccCcceeeeccHHHHHHHHHHHHHhcCCHHH
Q psy5091 2 GDPNDKTLRKLEKDVLIEQMMRDIAR--------TEKCAEFTEALEKCGRDNGWKGVFTCRKENEKMKECMAHWYHNEDF 73 (112)
Q Consensus 2 gdp~d~~Lr~vE~dvlIpk~mrerar--------~e~C~~~vk~Fa~C~k~~g~~~~~~CR~e~~amk~Cl~~~~~d~ef 73 (112)
|+|.+..++- ++|-+.+-|+- ..-|..+......|-+.+-|.- -.|++|...+.+|-+.|. +++|
T Consensus 16 g~pk~~vf~e-----ilPL~lkNrv~~g~~~~gs~~tC~qEm~vlfaClK~nEF~d-~~C~Kei~~f~dC~~~ya-~ea~ 88 (122)
T KOG4695|consen 16 GNPKKPVFKE-----ILPLILKNRVGEGRREKGSEATCIQEMSVLFACLKQNEFRD-DACRKEIQGFLDCAARYA-QEAR 88 (122)
T ss_pred CCCCCCcccc-----chhHHHhhhhccccCCcccchHHHHHHHHHHHHHHhccccc-hHHHHHHHHHHHHHHHHH-HHHH
Confidence 5666655543 56666555432 2469999999999999987654 479999999999999987 5554
Q ss_pred H
Q psy5091 74 R 74 (112)
Q Consensus 74 ~ 74 (112)
-
T Consensus 89 ~ 89 (122)
T KOG4695|consen 89 K 89 (122)
T ss_pred H
Confidence 3
No 9
>PF05676 NDUF_B7: NADH-ubiquinone oxidoreductase B18 subunit (NDUFB7); InterPro: IPR008698 NADH:ubiquinone oxidoreductase (complex I) (1.6.5.3 from EC) is a respiratory-chain enzyme that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane (NADH + ubiquinone = NAD+ + ubiquinol) []. Complex I is a major source of reactive oxygen species (ROS) that are predominantly formed by electron transfer from FMNH(2). Complex I is found in bacteria, cyanobacteria (as a NADH-plastoquinone oxidoreductase), archaea [], mitochondira, and in the hydrogenosome, a mitochondria-derived organelle. In general, the bacterial complex consists of 14 different subunits, while the mitochondrial complex contains homologues to these subunits in addition to approximately 31 additional proteins []. Mitochondrial complex I, which is located in the inner mitochondrial membrane, is the largest multimeric respiratory enzyme in the mitochondria, consisting of more than 40 subunits, one FMN co-factor and eight FeS clusters []. The assembly of mitochondrial complex I is an intricate process that requires the cooperation of the nuclear and mitochondrial genomes [, ]. Mitochondrial complex I can cycle between active and deactive forms that can be distinguished by the reactivity towards divalent cations and thiol-reactive agents. All redox prosthetic groups reside in the peripheral arm of the L-shaped structure. The NADH oxidation domain harbouring the FMN cofactor is connected via a chain of iron-sulphur clusters to the ubiquinone reduction site that is located in a large pocket formed by the PSST and 49kDa subunits of complex I []. This family consists of several NADH-ubiquinone oxidoreductase B18 subunit proteins from different eukaryotic organisms. Oxidative phosphorylation is the well-characterised process in which ATP, the principal carrier of chemical energy of individual cells, is produced due to a mitochondrial proton gradient formed by the transfer of electrons from NADH and FADH2 to molecular oxygen. The oxidative phosphorylation (OXPHOS) system is located in the mitochondrial inner membrane and consists of five multi-subunit enzyme complexes and two small electron carriers: coenzyme Q10 and cytochrome C. At least 70 structural proteins involved in the formation of the whole OXPHOS system are encoded by nuclear genes, whereas 13 structural proteins are encoded by the mitochondrial genome. Deficiency of NADH ubiquinone oxidoreductase, the first enzyme complex of the mitochondrial respiratory chain, is one of the most frequent causes of Homo sapiens mitochondrial encephalomyopathies [].; GO: 0003954 NADH dehydrogenase activity, 0008137 NADH dehydrogenase (ubiquinone) activity, 0005739 mitochondrion
Probab=72.54 E-value=2.6 Score=27.47 Aligned_cols=36 Identities=28% Similarity=0.647 Sum_probs=31.0
Q ss_pred hhhHHHHHHHHhhhccCcceeeeccHHHHHHHHHHHH
Q psy5091 29 EKCAEFTEALEKCGRDNGWKGVFTCRKENEKMKECMA 65 (112)
Q Consensus 29 e~C~~~vk~Fa~C~k~~g~~~~~~CR~e~~amk~Cl~ 65 (112)
..|+..+-.|..|-+. ++..+|+|..+..+-..|..
T Consensus 20 DyCAh~Li~l~kCrr~-~~p~~~~C~~erH~y~~C~y 55 (66)
T PF05676_consen 20 DYCAHLLIPLNKCRRD-NFPFPWKCEHERHEYEKCQY 55 (66)
T ss_pred hhHHHHHHHHHHHHHh-CCCCcccCCcchhhHHHccH
Confidence 4899999999999654 57777999999999999973
No 10
>PF11326 DUF3128: Protein of unknown function (DUF3128); InterPro: IPR021475 This eukaryotic family of proteins has no known function.
Probab=68.89 E-value=20 Score=23.69 Aligned_cols=59 Identities=24% Similarity=0.287 Sum_probs=42.9
Q ss_pred hhHHHHHHHHhhhccCccee-------eeccHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHH
Q psy5091 30 KCAEFTEALEKCGRDNGWKG-------VFTCRKENEKMKECMAHWYHNEDFRKEVTEMYLQQRTDYR 89 (112)
Q Consensus 30 ~C~~~vk~Fa~C~k~~g~~~-------~~~CR~e~~amk~Cl~~~~~d~ef~ee~k~eYl~eR~e~r 89 (112)
-|.+...++..|-.-.|-+. +-.|......+..||..-..... ..+.-++++.+|...+
T Consensus 6 sC~~~fd~~~~C~S~~~q~~~yYryG~~~~C~~~~~df~~C~~~k~~~~~-~~~~~~e~~~~~~~~~ 71 (84)
T PF11326_consen 6 SCMDAFDELWFCYSPGGQFRNYYRYGEFDDCSQWWEDFKFCLRWKSKPEK-RPEEVQEILKKREKER 71 (84)
T ss_pred cHHHHHHHHHHcCCchHhheeeeecCCCccHHHHHHHHHHHHHhccCCcc-CHHHHHHHHHHhHHHH
Confidence 49999999999988765322 23899999999999998764333 4455666666665555
No 11
>KOG3458|consensus
Probab=62.16 E-value=7.5 Score=29.57 Aligned_cols=38 Identities=24% Similarity=0.420 Sum_probs=29.5
Q ss_pred hhHHHHHHHHhhhccCcceeeeccHHHHHHHHHHHHHh
Q psy5091 30 KCAEFTEALEKCGRDNGWKGVFTCRKENEKMKECMAHW 67 (112)
Q Consensus 30 ~C~~~vk~Fa~C~k~~g~~~~~~CR~e~~amk~Cl~~~ 67 (112)
.|.++..+++.|.--++-.-+-.||++..++-.|....
T Consensus 77 ~C~~e~~~y~~C~dysst~~f~~Crk~Q~~fdkcv~~k 114 (170)
T KOG3458|consen 77 SCLEEFTKYATCMDYSSTNEFSHCRKEQEAFDKCVPDK 114 (170)
T ss_pred HhhHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHhh
Confidence 58888888888888777444558888888888887654
No 12
>KOG4114|consensus
Probab=59.69 E-value=21 Score=23.76 Aligned_cols=55 Identities=24% Similarity=0.411 Sum_probs=28.5
Q ss_pred hHHHHHHHHhhhccCcceeee-----ccHHHHH---HHHHHHHHhcCCHHHHHHHHHHHHHHHHHHH
Q psy5091 31 CAEFTEALEKCGRDNGWKGVF-----TCRKENE---KMKECMAHWYHNEDFRKEVTEMYLQQRTDYR 89 (112)
Q Consensus 31 C~~~vk~Fa~C~k~~g~~~~~-----~CR~e~~---amk~Cl~~~~~d~ef~ee~k~eYl~eR~e~r 89 (112)
|+..=++.+.|-..+--.++- .|-.-+. .=.+|.... ..|+ +||...|..|+-||
T Consensus 5 C~~~r~alk~Cl~~S~Cv~v~~ks~reCldn~~~~~vPeeC~al~---~af~-dCKRslvDmrkRfr 67 (73)
T KOG4114|consen 5 CKDQRKALKICLLRSDCVMVERKSPRECLDNPELKDVPEECIALM---KAFL-DCKRSLVDMRKRFR 67 (73)
T ss_pred HHHHHHHHHHHHhcCcceeeecCCHHHHhcCCccccCcHHHHHHH---HHHH-HHHHHHHHHHHHHc
Confidence 666667777776665432221 1211111 112233321 2355 48888888888876
No 13
>PF02297 COX6B: Cytochrome oxidase c subunit VIb; InterPro: IPR003213 Cytochrome c oxidase (1.9.3.1 from EC) is an oligomeric enzymatic complex that is a component of the respiratory chain complex and is involved in the transfer of electrons from cytochrome c to oxygen []. In eukaryotes this enzyme complex is located in the mitochondrial inner membrane; in aerobic prokaryotes it is found in the plasma membrane. In eukaryotes, in addition to the three large subunits, I, II and III, that form the catalytic centre of the enzyme complex, there are a variable number of small polypeptide subunits. One of these subunits is the potentially haem-binding subunit, VIb, which is encoded in the nucleus []. ; GO: 0004129 cytochrome-c oxidase activity, 0005739 mitochondrion; PDB: 1OCC_U 1OCR_U 2DYS_H 3ASO_H 3AG3_U 2EIL_H 2EIJ_U 3AG2_U 3ABM_U 2EIN_U ....
Probab=55.87 E-value=15 Score=23.93 Aligned_cols=40 Identities=25% Similarity=0.503 Sum_probs=33.1
Q ss_pred hhhHHHHHHHHhhhccCcc--------eeeeccHHHHHHH-HHHHHHhc
Q psy5091 29 EKCAEFTEALEKCGRDNGW--------KGVFTCRKENEKM-KECMAHWY 68 (112)
Q Consensus 29 e~C~~~vk~Fa~C~k~~g~--------~~~~~CR~e~~am-k~Cl~~~~ 68 (112)
..|=+.-.+|-.|...+|. ...-.|..+...+ +.|...|.
T Consensus 10 ~~Cw~arD~y~~Cl~~~~~~~~~~~~~~~~~~C~~~~~~ye~~Cp~sWv 58 (76)
T PF02297_consen 10 KKCWQARDDYFKCLDKNGEPDSEKEKKKDESACKYFRKNYESNCPSSWV 58 (76)
T ss_dssp HHHHHHHHHHHHHHHHHHH------TTTTGGGGHHHHHHHHHHS-HHHH
T ss_pred HHHHHHHHHHHHHHHHcCccccccccccchhhhHHHHHHHHHhCcHHHH
Confidence 4799999999999999887 3456899999998 45999997
No 14
>PF08991 DUF1903: Domain of unknown function (DUF1903); InterPro: IPR009069 The mature-T-cell-proliferation (MTCP1) putative oncogene was identified for its involvement in t(X:14)(q28;q11)-associated T-cell leukaemia []. MTCP1 is alternatively spliced to produce two completely distinct proteins: the small mitochondrial protein, p8MTCP1, and the protein p13MTCP1, which shows strong homology to another oncogene product, p14TCL1. While p13MTCP1 expression appears to be restricted to mature T-cell proliferation with t(X,14) translocations, the mitochondrial p8MTCP1 is expressed at low levels in most human tissues, and is over-expressed in the proliferating T-cells. The biological function of p8MTCP1 is still unknown, but it appears to play a role in oncogenesis. The structure of p8MTCP1 reveals a disulphide-rich, irregular array of three helices [].; PDB: 2HP8_A 1EI0_A 1HP8_A.
Probab=55.78 E-value=12 Score=24.37 Aligned_cols=48 Identities=19% Similarity=0.268 Sum_probs=19.0
Q ss_pred cHHHHHHHHHHHHHhcCCH-------HHHHHHHHHHHHHHHHHHHhCCchHHHHH
Q psy5091 53 CRKENEKMKECMAHWYHNE-------DFRKEVTEMYLQQRTDYRKTGLSKKMRKE 100 (112)
Q Consensus 53 CR~e~~amk~Cl~~~~~d~-------ef~ee~k~eYl~eR~e~r~tgv~~~~~~~ 100 (112)
|.++.-++..||..+-.|+ +.+-+|...|..++.+-.++++=.+....
T Consensus 4 C~~~Ac~iq~CL~~N~Yd~~kC~~~i~~l~~Cck~~y~~~~~~~~S~~Cp~~~~l 58 (67)
T PF08991_consen 4 CQKEACAIQKCLQRNNYDESKCQDYIDALYECCKKFYEQRGEDARSVCCPGPSLL 58 (67)
T ss_dssp THHHHHHHHHHHHHTTT-CCCTHHHHHHHHHHHTTS------GGG-HHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCHH
Confidence 5555555555555443332 12233455555556665566554444433
No 15
>KOG4149|consensus
Probab=54.07 E-value=19 Score=26.44 Aligned_cols=39 Identities=23% Similarity=0.280 Sum_probs=32.4
Q ss_pred hhHHHHHHHHhhhccCc-ceeeeccHHHHHHHHHHHHHhc
Q psy5091 30 KCAEFTEALEKCGRDNG-WKGVFTCRKENEKMKECMAHWY 68 (112)
Q Consensus 30 ~C~~~vk~Fa~C~k~~g-~~~~~~CR~e~~amk~Cl~~~~ 68 (112)
.|..+.++-.-|.+-+. ---...|-+++.+|.+|+..|-
T Consensus 69 pCG~eFreA~sCf~~s~~e~kg~dC~~qf~a~~~C~qk~p 108 (129)
T KOG4149|consen 69 PCGEEFREAFSCFKYSDTEPKGGDCVKQFVAMQECMQKYP 108 (129)
T ss_pred ccHHHHHHHHhhccccCCCcCccchHHHHHHHHHHHHhCc
Confidence 59999999999988763 3344599999999999999875
No 16
>PF05051 COX17: Cytochrome C oxidase copper chaperone (COX17); InterPro: IPR007745 Cox17p is essential for the assembly of functional cytochrome c oxidase (CCO) and for delivery of copper ions to the mitochondrion for insertion into the enzyme in Saccharomyces cerevisiae [].; GO: 0005507 copper ion binding, 0016531 copper chaperone activity, 0006825 copper ion transport, 0005758 mitochondrial intermembrane space; PDB: 1U97_A 1U96_A 1Z2G_A 2RNB_A 2RN9_A 2LGQ_A 2L0Y_B.
Probab=49.25 E-value=9.3 Score=23.70 Aligned_cols=21 Identities=43% Similarity=0.776 Sum_probs=18.5
Q ss_pred hhhHHHHHHHHhhhccCccee
Q psy5091 29 EKCAEFTEALEKCGRDNGWKG 49 (112)
Q Consensus 29 e~C~~~vk~Fa~C~k~~g~~~ 49 (112)
+.|.+.|+++-.|-++.||.+
T Consensus 29 e~C~~~Ieahk~Cmr~~GF~v 49 (49)
T PF05051_consen 29 EDCKELIEAHKACMRGEGFKV 49 (49)
T ss_dssp CCCHHHHHHHHHHHHHHTCCS
T ss_pred HHHHHHHHHHHHHHHHcCCCC
Confidence 469999999999999999864
No 17
>KOG4110|consensus
Probab=41.98 E-value=24 Score=25.51 Aligned_cols=20 Identities=15% Similarity=0.305 Sum_probs=14.2
Q ss_pred HHHHHhhhHHHHHHHHhhhcc
Q psy5091 24 DIARTEKCAEFTEALEKCGRD 44 (112)
Q Consensus 24 erar~e~C~~~vk~Fa~C~k~ 44 (112)
++.++ +|+.++.+|.+|...
T Consensus 53 ~~g~k-eC~ie~~dFqECv~~ 72 (120)
T KOG4110|consen 53 ERGEK-ECAIEYDDFQECVLM 72 (120)
T ss_pred HhhhH-HHHHHHHHHHHHHHH
Confidence 34554 788888888888754
No 18
>PF05254 UPF0203: Uncharacterised protein family (UPF0203); InterPro: IPR007918 This is a family of small highly conserved proteins. In Saccharomyces cerevisiae (Baker's yeast) the gene YKL053C-A (MDM35) O60200 from SWISSPROT is one of the genes essential for maintenance of normal mitochondrial distribution and morphology (MDM) []; wherease in Homo sapiens (Human), p53CSV, O43715 from SWISSPROT is a direct transcriptional target for p53 and appears to be a cell-survival mediator in response to genotoxic stress including low-levels of DNA damage. It is suggested that p53CSV modulates the apoptotic pathway through interaction with HSP70 and Apaf-1 thereby inhibiting activation of procaspase-3 and procaspase-9 [].
Probab=37.67 E-value=23 Score=23.03 Aligned_cols=20 Identities=25% Similarity=0.730 Sum_probs=9.0
Q ss_pred eeeccHHHHHHHHHHHHHhc
Q psy5091 49 GVFTCRKENEKMKECMAHWY 68 (112)
Q Consensus 49 ~~~~CR~e~~amk~Cl~~~~ 68 (112)
++..|.+...+-..|...||
T Consensus 5 ~~~eC~~lK~~YD~CFn~Wf 24 (68)
T PF05254_consen 5 LAPECTELKEKYDQCFNKWF 24 (68)
T ss_pred hhhHHHHHHHHHHHHHHHHH
Confidence 33444444444444444444
No 19
>KOG4110|consensus
Probab=33.59 E-value=30 Score=25.00 Aligned_cols=36 Identities=22% Similarity=0.564 Sum_probs=32.3
Q ss_pred hHHHHHHHHhhhccCcceeee-ccHHHHHHHHHHHHH
Q psy5091 31 CAEFTEALEKCGRDNGWKGVF-TCRKENEKMKECMAH 66 (112)
Q Consensus 31 C~~~vk~Fa~C~k~~g~~~~~-~CR~e~~amk~Cl~~ 66 (112)
|...=+.|.+|+-+.|..+.= -|+.+.+-+.+|+.-
T Consensus 36 cg~FE~e~~eC~eayG~~~g~keC~ie~~dFqECv~~ 72 (120)
T KOG4110|consen 36 CGKFEKEWMECAEAYGLERGEKECAIEYDDFQECVLM 72 (120)
T ss_pred ccHHHHHHHHHHHHHhhHhhhHHHHHHHHHHHHHHHH
Confidence 999999999999999976655 799999999999874
No 20
>PF12295 Symplekin_C: Symplekin tight junction protein C terminal; InterPro: IPR022075 This domain family is found in eukaryotes, and is approximately 180 amino acids in length. There is a single completely conserved residue P that may be functionally important. Symplekn has been localized, by light and electron microscopy, to the plaque associated with the cytoplasmic face of the tight junction-containing zone (zonula occludens) of polar epithelial cells and of Sertoli cells of testis. However, both the mRNA and the protein can also be detected in a wide range of cell types that do not form tight junctions. Careful analyses have revealed that the protein occurs in all these diverse cells in the nucleoplasm, and only in those cells forming tight junctions is it recruited, partly but specifically, to the plaque structure of the zonula occludens.
Probab=29.51 E-value=87 Score=23.63 Aligned_cols=35 Identities=14% Similarity=0.383 Sum_probs=28.2
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhcc
Q psy5091 7 KTLRKLEKDVLIEQMMRDIARTEKCAEFTEALEKCGRD 44 (112)
Q Consensus 7 ~~Lr~vE~dvlIpk~mrerar~e~C~~~vk~Fa~C~k~ 44 (112)
++|+..-. .+++++.+.++=+ . ...|++|..|++-
T Consensus 124 p~L~~FV~-~iL~rLi~kqvW~-~-~~lW~Gfi~C~~~ 158 (183)
T PF12295_consen 124 PSLRSFVS-NILSRLIQKQVWK-N-KKLWEGFIKCAKR 158 (183)
T ss_pred hHHHHHHH-HHHHHHHHHHHhc-C-hhHHHHHHHHHHH
Confidence 45666666 6888888888886 5 8999999999976
No 21
>PHA03155 hypothetical protein; Provisional
Probab=28.39 E-value=40 Score=24.33 Aligned_cols=20 Identities=35% Similarity=0.738 Sum_probs=18.0
Q ss_pred CCCCchhhhHHHHHHHHHHH
Q psy5091 2 GDPNDKTLRKLEKDVLIEQM 21 (112)
Q Consensus 2 gdp~d~~Lr~vE~dvlIpk~ 21 (112)
|+|+|+.|.--+++++|-..
T Consensus 35 ~~p~d~~LT~~qKea~I~s~ 54 (115)
T PHA03155 35 GNPEDELLTPAQKDAIINSL 54 (115)
T ss_pred CCCCccccCHHHHHHHHHHH
Confidence 68999999999999999764
No 22
>KOG2192|consensus
Probab=28.23 E-value=54 Score=27.48 Aligned_cols=36 Identities=19% Similarity=0.388 Sum_probs=28.2
Q ss_pred hhhHHHHHHHHhhhccCcceeeeccHHHHHHHHHHHH
Q psy5091 29 EKCAEFTEALEKCGRDNGWKGVFTCRKENEKMKECMA 65 (112)
Q Consensus 29 e~C~~~vk~Fa~C~k~~g~~~~~~CR~e~~amk~Cl~ 65 (112)
++|..-++-|+.||-+.|-.|+..=-+++..+. |+.
T Consensus 150 ekcsarlkift~c~p~stdrv~l~~g~~k~v~~-~i~ 185 (390)
T KOG2192|consen 150 EKCSARLKIFTECCPHSTDRVVLIGGKPKRVVE-CIK 185 (390)
T ss_pred HhhhhhhhhhhccCCCCcceEEEecCCcchHHH-HHH
Confidence 589999999999999999888876655555443 554
No 23
>KOG3496|consensus
Probab=27.85 E-value=47 Score=22.07 Aligned_cols=22 Identities=36% Similarity=0.711 Sum_probs=19.0
Q ss_pred HhhhHHHHHHHHhhhccCccee
Q psy5091 28 TEKCAEFTEALEKCGRDNGWKG 49 (112)
Q Consensus 28 ~e~C~~~vk~Fa~C~k~~g~~~ 49 (112)
.+.|...+++.-.|-++.||.+
T Consensus 51 ee~C~~lIEahk~CMr~~GF~v 72 (72)
T KOG3496|consen 51 EEKCGKLIEAHKECMRAYGFEV 72 (72)
T ss_pred HHHHHHHHHHHHHHHHHcCCCC
Confidence 3589999999999999999854
No 24
>KOG4695|consensus
Probab=25.23 E-value=2e+02 Score=20.90 Aligned_cols=42 Identities=19% Similarity=0.403 Sum_probs=31.5
Q ss_pred eeccHHHHHHHHHHHHHh-cCCH-------HHHHHHHHHHHHHHHHHHHhC
Q psy5091 50 VFTCRKENEKMKECMAHW-YHNE-------DFRKEVTEMYLQQRTDYRKTG 92 (112)
Q Consensus 50 ~~~CR~e~~amk~Cl~~~-~~d~-------ef~ee~k~eYl~eR~e~r~tg 92 (112)
-.+|-.+...|-.||.+| |.|. .|+ .|-..|.++..++|.+.
T Consensus 45 ~~tC~qEm~vlfaClK~nEF~d~~C~Kei~~f~-dC~~~ya~ea~~~r~~~ 94 (122)
T KOG4695|consen 45 EATCIQEMSVLFACLKQNEFRDDACRKEIQGFL-DCAARYAQEARKMRSIQ 94 (122)
T ss_pred chHHHHHHHHHHHHHHhccccchHHHHHHHHHH-HHHHHHHHHHHHHHHhH
Confidence 458999999999999987 3222 233 36678899999999875
No 25
>PF15551 DUF4656: Domain of unknown function (DUF4656)
Probab=24.82 E-value=95 Score=26.40 Aligned_cols=69 Identities=16% Similarity=0.279 Sum_probs=42.2
Q ss_pred CCCCchhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhccCcceeeeccHHHHHHHHHHHHHhcCCHHHHHHH
Q psy5091 2 GDPNDKTLRKLEKDVLIEQMMRDIARTEKCAEFTEALEKCGRDNGWKGVFTCRKENEKMKECMAHWYHNEDFRKEV 77 (112)
Q Consensus 2 gdp~d~~Lr~vE~dvlIpk~mrerar~e~C~~~vk~Fa~C~k~~g~~~~~~CR~e~~amk~Cl~~~~~d~ef~ee~ 77 (112)
.|..+-+++-.|.||||-+.+-|-- =..++...|+|..+..|+- +=.+..+..+. +++-|+=+|--.||
T Consensus 198 ~el~~gsms~~~iD~LI~kKL~elf----s~hqi~elakctsdtvFl~--Kt~~IsdLI~s-itqdy~leEqdAEc 266 (370)
T PF15551_consen 198 PELSSGSMSSRDIDVLITKKLTELF----SLHQIDELAKCTSDTVFLE--KTNEISDLINS-ITQDYNLEEQDAEC 266 (370)
T ss_pred cccccCccchhhHHHHHHHHHHHHH----HHHHHHHHHhcccchHHhh--hhhHHHHHHHH-HHHhccccchhhhh
Confidence 4455677788999999988655532 3356889999999855432 33445555554 44434334333334
No 26
>PF10203 Pet191_N: Cytochrome c oxidase assembly protein PET191; InterPro: IPR018793 This entry represents a family of conserved proteins found from nematodes to humans. Cytochrome c oxidase assembly protein Pet191 carries six highly conserved cysteine residues. Pet191 is required for the assembly of active cytochrome c oxidase but does not form part of the final assembled complex [].
Probab=23.73 E-value=57 Score=21.10 Aligned_cols=32 Identities=31% Similarity=0.639 Sum_probs=23.1
Q ss_pred hhHHHHHHHHhhhccCcceeeeccH-HHHHHHHHHHHHh
Q psy5091 30 KCAEFTEALEKCGRDNGWKGVFTCR-KENEKMKECMAHW 67 (112)
Q Consensus 30 ~C~~~vk~Fa~C~k~~g~~~~~~CR-~e~~amk~Cl~~~ 67 (112)
-|.+.-++++.|-.. ..|= .+..-.++||..+
T Consensus 4 sC~~~~~~L~~Cl~~------SdCv~~~~~t~~~Cl~~~ 36 (68)
T PF10203_consen 4 SCKGIREALAECLQE------SDCVKKEKRTPKDCLKDP 36 (68)
T ss_pred hHHHHHHHHHHHHhh------ChhhccCCCCHHHHHcCC
Confidence 477788888888554 5663 4777888888876
No 27
>PF07182 DUF1402: Protein of unknown function (DUF1402); InterPro: IPR009842 This family consists of several hypothetical bacterial proteins of around 310 residues in length. Members of this family seem to be found exclusively in Agrobacterium, Rhizobium and Brucella species. The function of this family is unknown.
Probab=23.15 E-value=42 Score=27.73 Aligned_cols=20 Identities=15% Similarity=0.605 Sum_probs=18.2
Q ss_pred HHHhhhccCcceeeeccHHH
Q psy5091 37 ALEKCGRDNGWKGVFTCRKE 56 (112)
Q Consensus 37 ~Fa~C~k~~g~~~~~~CR~e 56 (112)
.|+.|....+-...|+||+.
T Consensus 126 qF~~C~~~~~S~~lWsCrE~ 145 (303)
T PF07182_consen 126 QFARCAKLKDSYSLWSCREN 145 (303)
T ss_pred hhHhhhcccCchhheeeHHH
Confidence 69999999999999999984
No 28
>PRK12355 conjugal transfer mating pair stabilization protein TraN; Reviewed
Probab=22.72 E-value=19 Score=32.14 Aligned_cols=32 Identities=25% Similarity=0.772 Sum_probs=25.5
Q ss_pred hhHHHHHHHHhhhccCcc---eeeeccHHHHHHHH
Q psy5091 30 KCAEFTEALEKCGRDNGW---KGVFTCRKENEKMK 61 (112)
Q Consensus 30 ~C~~~vk~Fa~C~k~~g~---~~~~~CR~e~~amk 61 (112)
.|..-+-.|.+||++.|| .+.++|..+-.+|.
T Consensus 418 ~C~k~~~G~~nCC~~~gwg~~~~l~~C~~~E~~l~ 452 (558)
T PRK12355 418 SCRKKAAGFSNCCKDSGWGQDIGLAKCSSEEKALG 452 (558)
T ss_pred eecCcCCCcccccCCCCcccccccccCCHHHHHHH
Confidence 599888999999999998 55678977655553
No 29
>PF09889 DUF2116: Uncharacterized protein containing a Zn-ribbon (DUF2116); InterPro: IPR019216 This entry contains various hypothetical prokaryotic proteins whose functions are unknown. They contain a conserved zinc ribbon motif in the N-terminal part and a predicted transmembrane segment in the C-terminal part.
Probab=22.54 E-value=1.1e+02 Score=19.41 Aligned_cols=22 Identities=32% Similarity=0.504 Sum_probs=16.5
Q ss_pred CHHHH-HHHHHHHHHHHHHHHHh
Q psy5091 70 NEDFR-KEVTEMYLQQRTDYRKT 91 (112)
Q Consensus 70 d~ef~-ee~k~eYl~eR~e~r~t 91 (112)
|+.|= ++|+++|.+++...++|
T Consensus 16 ~~~fCS~~C~~~~~k~qk~~~~~ 38 (59)
T PF09889_consen 16 DESFCSPKCREEYRKRQKRMRKT 38 (59)
T ss_pred chhhhCHHHHHHHHHHHHHHHHH
Confidence 34444 58999999998887765
No 30
>PLN03079 Uncharacterized protein At4g33100; Provisional
Probab=22.29 E-value=76 Score=22.01 Aligned_cols=39 Identities=28% Similarity=0.544 Sum_probs=21.0
Q ss_pred hhHHHHHHHHhhhcc----Ccceeee---ccHHHHHHHHHHHHHhc
Q psy5091 30 KCAEFTEALEKCGRD----NGWKGVF---TCRKENEKMKECMAHWY 68 (112)
Q Consensus 30 ~C~~~vk~Fa~C~k~----~g~~~~~---~CR~e~~amk~Cl~~~~ 68 (112)
.|.+.=++|-+|... .-+..-| .|.++...-..|+..+.
T Consensus 17 eCtelK~~YD~CFN~WYsEkFLKG~~~~~eC~~~w~~Yq~Cv~~aL 62 (91)
T PLN03079 17 PCAELRTAYHNCFNRWYSEKFVKGQWDKEDCVAEWHKYRACLSEHL 62 (91)
T ss_pred ccHHHHHHHHHHHHHHHHHhhhcCCcccchHHHHHHHHHHHHHHHH
Confidence 466666666666553 2223333 46666666666666554
No 31
>PF15540 Toxin_62: Putative toxin 62
Probab=21.37 E-value=40 Score=24.22 Aligned_cols=14 Identities=29% Similarity=0.565 Sum_probs=11.9
Q ss_pred HHHHHhCCchHHHH
Q psy5091 86 TDYRKTGLSKKMRK 99 (112)
Q Consensus 86 ~e~r~tgv~~~~~~ 99 (112)
..|||||||+.+..
T Consensus 28 eAfrRTg~pk~~f~ 41 (113)
T PF15540_consen 28 EAFRRTGVPKEQFT 41 (113)
T ss_pred HHHHhhCCCccccc
Confidence 47999999998776
No 32
>KOG4138|consensus
Probab=20.17 E-value=92 Score=21.71 Aligned_cols=18 Identities=33% Similarity=0.562 Sum_probs=15.1
Q ss_pred eccHHHHHHHHHHHHHhc
Q psy5091 51 FTCRKENEKMKECMAHWY 68 (112)
Q Consensus 51 ~~CR~e~~amk~Cl~~~~ 68 (112)
-.|-.++-++++|+..+.
T Consensus 41 ~GC~~ehlalq~C~a~t~ 58 (96)
T KOG4138|consen 41 SGCAAEHLALQECMAQTQ 58 (96)
T ss_pred cchHHHHHHHHHHHHhhc
Confidence 468899999999999754
Done!