Query psy5091
Match_columns 112
No_of_seqs 102 out of 123
Neff 5.1
Searched_HMMs 13730
Date Fri Aug 16 17:06:26 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5091.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/5091hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1u97a_ a.17.1.2 (A:) Cytochro 38.3 4.9 0.00036 24.1 0.9 22 29-50 45-66 (69)
2 d1b25a1 a.110.1.1 (A:211-619) 17.0 31 0.0022 25.9 2.2 36 70-106 362-397 (409)
3 d2hp8a_ a.17.1.1 (A:) p8-MTCP1 15.1 51 0.0037 19.2 2.4 20 52-71 6-25 (68)
4 d1o6ba_ c.26.1.3 (A:) Phosphop 13.5 35 0.0025 20.6 1.4 16 75-92 146-161 (163)
5 d1kjsa_ a.50.1.1 (A:) C5a anap 12.2 36 0.0026 20.0 1.0 10 35-44 48-57 (74)
6 d1c5aa_ a.50.1.1 (A:) C5a anap 11.6 39 0.0028 19.5 1.0 10 35-44 48-57 (66)
7 d2b1xa1 b.33.1.2 (A:1-162) Nap 11.3 1.1E+02 0.0083 19.4 3.6 17 66-82 26-42 (162)
8 d2fq4a2 a.121.1.1 (A:78-192) T 10.8 1.5E+02 0.011 17.0 4.2 37 58-94 24-60 (115)
9 d3bl2a1 f.1.4.1 (A:6-134) Bcl- 9.7 73 0.0053 20.0 2.0 14 55-68 105-118 (129)
10 d2pf1a2 g.32.1.1 (A:36-65) Pro 9.3 89 0.0065 15.2 1.8 24 33-65 5-28 (30)
No 1
>d1u97a_ a.17.1.2 (A:) Cytochrome C oxidase copper chaperone, COX17 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=38.31 E-value=4.9 Score=24.11 Aligned_cols=22 Identities=36% Similarity=0.745 Sum_probs=17.4
Q ss_pred hhhHHHHHHHHhhhccCcceee
Q psy5091 29 EKCAEFTEALEKCGRDNGWKGV 50 (112)
Q Consensus 29 e~C~~~vk~Fa~C~k~~g~~~~ 50 (112)
++|.+.|+++-.|-++.||.+.
T Consensus 45 ~~C~~lIeahk~CMr~~GF~v~ 66 (69)
T d1u97a_ 45 EKCKEFIEKYKECMKGYGFEVP 66 (69)
T ss_dssp TTSHHHHHHHHHHHHHHTCSSC
T ss_pred HHHHHHHHHHHHHHHHcCCCCC
Confidence 3588888888888888888653
No 2
>d1b25a1 a.110.1.1 (A:211-619) Formaldehyde ferredoxin oxidoreductase {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=17.03 E-value=31 Score=25.87 Aligned_cols=36 Identities=22% Similarity=0.235 Sum_probs=28.8
Q ss_pred CHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHhhhcc
Q psy5091 70 NEDFRKEVTEMYLQQRTDYRKTGLSKKMRKELESLGY 106 (112)
Q Consensus 70 d~ef~ee~k~eYl~eR~e~r~tgv~~~~~~~~~~~~~ 106 (112)
|++-++++.++|-+.|=== +||+|.+....++.+++
T Consensus 362 d~~~~e~~l~~YY~~rGWd-e~G~Pt~e~L~~LgL~~ 397 (409)
T d1b25a1 362 DEKKYDELLSEYYRIRGWD-ERGIPKKETLKELDLDF 397 (409)
T ss_dssp CHHHHHHHHHHHHHHHTBC-TTSCBCHHHHHHTTCTT
T ss_pred CHHHHHHHHHHHHHHcCCC-CCCccCHHHHHHCCChh
Confidence 5566788889998776544 69999999999988774
No 3
>d2hp8a_ a.17.1.1 (A:) p8-MTCP1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=15.06 E-value=51 Score=19.25 Aligned_cols=20 Identities=20% Similarity=0.469 Sum_probs=15.8
Q ss_pred ccHHHHHHHHHHHHHhcCCH
Q psy5091 52 TCRKENEKMKECMAHWYHNE 71 (112)
Q Consensus 52 ~CR~e~~amk~Cl~~~~~d~ 71 (112)
-|.++.=+++.||..+-.|+
T Consensus 6 PCk~~AC~IQ~CLq~N~Y~E 25 (68)
T d2hp8a_ 6 PCQKQACEIQKCLQANSYME 25 (68)
T ss_dssp TTHHHHHHHHHHHHHTTTCT
T ss_pred CchHHHHHHHHHHHHCCCCH
Confidence 38888888999999875565
No 4
>d1o6ba_ c.26.1.3 (A:) Phosphopantetheine adenylyltransferase {Bacillus subtilis [TaxId: 1423]}
Probab=13.45 E-value=35 Score=20.58 Aligned_cols=16 Identities=38% Similarity=0.627 Sum_probs=11.3
Q ss_pred HHHHHHHHHHHHHHHHhC
Q psy5091 75 KEVTEMYLQQRTDYRKTG 92 (112)
Q Consensus 75 ee~k~eYl~eR~e~r~tg 92 (112)
-+.-..||+++ ||++|
T Consensus 146 P~~V~~yI~e~--~~~~~ 161 (163)
T d1o6ba_ 146 PPEVELALQQK--FRQGG 161 (163)
T ss_dssp CHHHHHHHHHH--HHSCS
T ss_pred CHHHHHHHHHH--HhccC
Confidence 34566788776 88887
No 5
>d1kjsa_ a.50.1.1 (A:) C5a anaphylotoxin {Human (Homo sapiens) [TaxId: 9606]}
Probab=12.16 E-value=36 Score=19.98 Aligned_cols=10 Identities=20% Similarity=0.358 Sum_probs=8.4
Q ss_pred HHHHHhhhcc
Q psy5091 35 TEALEKCGRD 44 (112)
Q Consensus 35 vk~Fa~C~k~ 44 (112)
+++|.+||.-
T Consensus 48 ~~AFl~CC~~ 57 (74)
T d1kjsa_ 48 IKAFTECCVV 57 (74)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 7899999964
No 6
>d1c5aa_ a.50.1.1 (A:) C5a anaphylotoxin {Pig (Sus scrofa domestica) [TaxId: 9823]}
Probab=11.61 E-value=39 Score=19.48 Aligned_cols=10 Identities=20% Similarity=0.375 Sum_probs=8.3
Q ss_pred HHHHHhhhcc
Q psy5091 35 TEALEKCGRD 44 (112)
Q Consensus 35 vk~Fa~C~k~ 44 (112)
+++|.+||.-
T Consensus 48 ~~AFl~CC~~ 57 (66)
T d1c5aa_ 48 VKAFKDCCYI 57 (66)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 7899999963
No 7
>d2b1xa1 b.33.1.2 (A:1-162) Naphthalene 1,2-dioxygenase alpha subunit, N-domain {Rhodococcus sp. ncimb12038 [TaxId: 92694]}
Probab=11.30 E-value=1.1e+02 Score=19.44 Aligned_cols=17 Identities=6% Similarity=0.055 Sum_probs=13.2
Q ss_pred HhcCCHHHHHHHHHHHH
Q psy5091 66 HWYHNEDFRKEVTEMYL 82 (112)
Q Consensus 66 ~~~~d~ef~ee~k~eYl 82 (112)
.+|+||++++..++.++
T Consensus 26 ~~Y~d~~~f~~E~~~if 42 (162)
T d2b1xa1 26 AIINDPEVHDVERERIF 42 (162)
T ss_dssp GGSSCHHHHHHHHHHTT
T ss_pred HHcCCHHHHHHHHHHHH
Confidence 37899999998776654
No 8
>d2fq4a2 a.121.1.1 (A:78-192) Transcriptional regulator BC3163 {Bacillus cereus [TaxId: 1396]}
Probab=10.77 E-value=1.5e+02 Score=16.96 Aligned_cols=37 Identities=19% Similarity=0.160 Sum_probs=28.1
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHhCCc
Q psy5091 58 EKMKECMAHWYHNEDFRKEVTEMYLQQRTDYRKTGLS 94 (112)
Q Consensus 58 ~amk~Cl~~~~~d~ef~ee~k~eYl~eR~e~r~tgv~ 94 (112)
..|...+..-..||++.+...+.++..+.+.-+.-+.
T Consensus 24 ~~~~~li~e~~~~p~l~~~~~~~~~~~~~~~~~~~l~ 60 (115)
T d2fq4a2 24 TIINELVGEGQFDSKLAEEYRVRYFQPRRLQAKQLLE 60 (115)
T ss_dssp THHHHHHHHHTTCHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566677777889999999999999888776544433
No 9
>d3bl2a1 f.1.4.1 (A:6-134) Bcl-2 homolog V-bcl-2 {Murid herpesvirus 4 [TaxId: 33708]}
Probab=9.75 E-value=73 Score=20.02 Aligned_cols=14 Identities=29% Similarity=1.047 Sum_probs=11.8
Q ss_pred HHHHHHHHHHHHhc
Q psy5091 55 KENEKMKECMAHWY 68 (112)
Q Consensus 55 ~e~~amk~Cl~~~~ 68 (112)
+.+..+|+||+.++
T Consensus 105 edhellndcmthff 118 (129)
T d3bl2a1 105 EDHELLNDCMTHFF 118 (129)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHH
Confidence 67889999999765
No 10
>d2pf1a2 g.32.1.1 (A:36-65) Prothrombin {Cow (Bos taurus) [TaxId: 9913]}
Probab=9.32 E-value=89 Score=15.24 Aligned_cols=24 Identities=29% Similarity=0.645 Sum_probs=15.6
Q ss_pred HHHHHHHhhhccCcceeeeccHHHHHHHHHHHH
Q psy5091 33 EFTEALEKCGRDNGWKGVFTCRKENEKMKECMA 65 (112)
Q Consensus 33 ~~vk~Fa~C~k~~g~~~~~~CR~e~~amk~Cl~ 65 (112)
..|.+|+.|-.. |+....+.+||.
T Consensus 5 ~fwakytaces~---------r~prekl~~cle 28 (30)
T d2pf1a2 5 AFWAKYTACESA---------RNPREKLNECLE 28 (30)
T ss_dssp HHHHHHHHTSTT---------CSSHHHHHHHHS
T ss_pred HHHHHHHHHHHh---------cCcHHHHHHHhc
Confidence 456667766554 456677788874
Done!