Query psy5093
Match_columns 662
No_of_seqs 366 out of 4017
Neff 10.6
Searched_HMMs 29240
Date Fri Aug 16 17:08:58 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5093.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/5093hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4grv_A Neurotensin receptor ty 100.0 2.1E-46 7.2E-51 401.7 13.7 364 49-412 30-488 (510)
2 3vw7_A Proteinase-activated re 100.0 1.1E-42 3.8E-47 372.4 11.8 372 42-415 11-469 (484)
3 2rh1_A Beta-2-adrenergic recep 100.0 5.9E-40 2E-44 351.4 28.1 358 48-415 37-481 (500)
4 3uon_A Human M2 muscarinic ace 100.0 1.3E-41 4.4E-46 362.4 14.9 362 48-415 20-462 (467)
5 3odu_A C-X-C chemokine recepto 100.0 5.8E-42 2E-46 368.5 7.6 366 46-416 43-498 (502)
6 3pbl_A D(3) dopamine receptor, 100.0 3.3E-41 1.1E-45 360.6 11.8 356 49-415 36-476 (481)
7 3rze_A Histamine H1 receptor, 100.0 9.1E-41 3.1E-45 354.3 10.5 362 50-417 7-449 (452)
8 3eml_A Human adenosine A2A rec 100.0 2.2E-40 7.4E-45 355.0 13.5 362 49-416 19-472 (488)
9 3v2y_A Sphingosine 1-phosphate 100.0 5.6E-40 1.9E-44 352.9 16.5 354 52-415 64-497 (520)
10 4dkl_A MU-type opioid receptor 100.0 8.7E-41 3E-45 355.7 9.7 361 48-414 14-459 (464)
11 2ks9_A Substance-P receptor; w 100.0 9.6E-38 3.3E-42 320.9 27.7 286 51-414 32-325 (364)
12 2lnl_A C-X-C chemokine recepto 100.0 6.2E-38 2.1E-42 312.2 22.3 273 51-411 11-294 (296)
13 2z73_A Rhodopsin; visual pigme 100.0 1.3E-37 4.4E-42 329.2 26.1 293 50-411 33-332 (448)
14 4ea3_A Fusion protein of nocic 100.0 1E-37 3.4E-42 328.2 24.8 292 43-416 117-415 (434)
15 1u19_A Rhodopsin; G protein-co 100.0 2.8E-38 9.7E-43 323.0 20.1 285 47-413 34-326 (349)
16 4eiy_A Adenosine receptor A2A/ 100.0 1.3E-40 4.6E-45 352.4 2.7 363 48-416 28-431 (447)
17 4amj_A Beta-1 adrenergic recep 100.0 5.5E-38 1.9E-42 315.9 21.3 292 47-414 7-304 (315)
18 3sn6_R Lysozyme, beta-2 adrene 100.0 1.5E-37 5.2E-42 334.1 21.1 313 46-415 177-495 (514)
19 4grv_A Neurotensin receptor ty 99.9 4.8E-26 1.6E-30 243.7 13.2 79 584-662 398-479 (510)
20 3vw7_A Proteinase-activated re 99.9 8.9E-23 3E-27 217.9 11.6 77 586-662 381-457 (484)
21 2rh1_A Beta-2-adrenergic recep 99.9 4.6E-21 1.6E-25 204.8 24.2 70 587-662 400-469 (500)
22 3uon_A Human M2 muscarinic ace 99.9 2.8E-21 9.5E-26 205.3 15.2 88 418-505 130-220 (467)
23 3v2y_A Sphingosine 1-phosphate 99.8 4.3E-21 1.5E-25 205.9 13.8 72 588-662 414-485 (520)
24 3odu_A C-X-C chemokine recepto 99.8 3.2E-22 1.1E-26 214.6 4.3 77 586-662 404-485 (502)
25 3rze_A Histamine H1 receptor, 99.8 1.5E-21 5.1E-26 206.4 7.9 72 586-662 364-435 (452)
26 3eml_A Human adenosine A2A rec 99.8 6.7E-20 2.3E-24 195.8 18.8 74 586-662 386-459 (488)
27 4dkl_A MU-type opioid receptor 99.8 1.5E-20 5E-25 199.5 13.3 74 587-662 375-448 (464)
28 3pbl_A D(3) dopamine receptor, 99.8 7.7E-21 2.6E-25 202.6 10.3 71 588-662 394-464 (481)
29 2z73_A Rhodopsin; visual pigme 99.8 5.4E-19 1.8E-23 186.3 20.2 177 418-662 142-324 (448)
30 4eiy_A Adenosine receptor A2A/ 99.8 1.5E-19 5.2E-24 190.6 15.6 239 419-662 137-418 (447)
31 3sn6_R Lysozyme, beta-2 adrene 99.8 8.3E-19 2.9E-23 188.1 19.2 188 419-662 290-483 (514)
32 2lnl_A C-X-C chemokine recepto 99.8 2E-18 6.7E-23 171.2 20.1 159 419-662 117-286 (296)
33 2ks9_A Substance-P receptor; w 99.8 4.6E-18 1.6E-22 174.0 23.1 165 423-662 142-314 (364)
34 4amj_A Beta-1 adrenergic recep 99.8 1.3E-18 4.5E-23 174.1 18.1 169 419-662 119-293 (315)
35 1u19_A Rhodopsin; G protein-co 99.8 1.8E-18 6.2E-23 175.9 19.0 160 423-662 149-316 (349)
36 4ea3_A Fusion protein of nocic 99.8 7.7E-18 2.6E-22 176.5 20.5 165 418-662 231-402 (434)
37 2koe_A Human cannabinoid recep 98.5 5.4E-08 1.8E-12 62.5 3.0 37 376-412 3-39 (40)
38 2koe_A Human cannabinoid recep 98.3 7E-08 2.4E-12 61.9 -0.3 29 634-662 2-30 (40)
39 2ki9_A Cannabinoid receptor 2; 98.3 4.8E-08 1.6E-12 59.3 -1.2 30 590-619 1-30 (33)
40 1hll_A Alpha-2A adrenergic rec 98.1 4E-07 1.4E-11 55.0 0.6 30 138-167 2-31 (32)
41 2ki9_A Cannabinoid receptor 2; 97.6 1.5E-05 5E-10 48.1 0.6 29 331-359 1-29 (33)
42 2lot_A Apelin receptor; membra 96.1 0.0004 1.4E-08 48.3 -1.9 29 53-81 30-58 (64)
43 2ket_A Cathelicidin-6; antimic 81.1 0.52 1.8E-05 24.4 0.8 18 399-416 4-21 (27)
44 2rdd_B UPF0092 membrane protei 28.0 54 0.0019 19.6 2.8 24 481-504 6-30 (37)
No 1
>4grv_A Neurotensin receptor type 1, lysozyme chimera; G-protein coupled receptor, G-protein, signaling protein-agonist complex; HET: EPE; 2.80A {Rattus norvegicus}
Probab=100.00 E-value=2.1e-46 Score=401.68 Aligned_cols=364 Identities=19% Similarity=0.278 Sum_probs=236.1
Q ss_pred hHHHHHHHHHHHHHHHHHHhhHhhhhheecccccc---chhhHHHHHHHHHHHhhhhhcccHHHHHhhc-cccccccccc
Q psy5093 49 QQRTLLVSTLSLFSLVTVFGNALVMIAVVRERYLH---TSTNYFIMSLALADCLVGLVVMPFSALYELL-DHNWIFGLNW 124 (662)
Q Consensus 49 ~~~~i~~~~~~ii~i~gl~gN~~vi~~i~~~~~lr---~~~~~ll~~Lai~Dll~~l~~~p~~~~~~~~-~~~~~~~~~~ 124 (662)
..++++.++|.+++++|++||+++++++.++|++| +++|+|++|||++|++.+++.+|+.+...+. .+.|.+|+.+
T Consensus 30 ~~~v~~~~~~~~i~~~g~~gN~lvi~~i~~~~~~r~~~~~~n~~i~~La~aDll~~~~~~p~~~~~~~~~~~~w~~g~~~ 109 (510)
T 4grv_A 30 YSKVLVTAIYLALFVVGTVGNSVTLFTLARKKSLQSLQSTVHYHLGSLALSDLLILLLAMPVELYNFIWVHHPWAFGDAG 109 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTSCC----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCSSCSSHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhheeeecCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEhhHHH
Confidence 34678888999999999999999999999887554 7889999999999999999999987776553 4679999999
Q ss_pred hhHHHHhhHHHHHHHHHHHHHHHHHHhhhhcCCCCCCccccchhhhHHHHHHHHHHHhhhhhHHHhhhccccCCCC----
Q psy5093 125 CDSWRSLDVLFSTASILNLCVISLDRYWAITDPLTYPSRMSTRRAYIWIAIVWICSGGISFPAILWWRAVRNEEVP---- 200 (662)
Q Consensus 125 C~~~~~~~~~~~~~s~~~l~~iaidRy~~I~~P~~y~~~~t~~~~~~~i~~~w~~s~~~~~~~~~~~~~~~~~~~~---- 200 (662)
|++..++..++..+|++++++||+|||++|++|++|+..++++++..+++++|++++++++|+++.+.........
T Consensus 110 C~~~~~~~~~~~~~S~~~l~~is~dRy~ai~~P~~~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~~~~~~~~ 189 (510)
T 4grv_A 110 CRGYYFLRDACTYATALNVASLSVARYLAICHPFKAKTLMSRSRTKKFISAIWLASALLAIPMLFTMGLQNRSADGTHPG 189 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCCCCCCSCCHHHHHHHHHHHHHHHTTHHHHEEEEECSSSSCCGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHheEEEeccccccccccccccceeehHHHHHHHHHHHHHHHhhcccccccCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999987655433222
Q ss_pred CCccccCCC----cchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCcccc-----cCCCCCCccc-------
Q psy5093 201 KNKCPFTDS----KGYLIFSSTISFYLPLLVMVFTYFKIYRAAVVQTKSLKVGTKQVM-----SGSTSGEKEL------- 264 (662)
Q Consensus 201 ~~~c~~~~~----~~~~~~~~~~~~~ip~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~-----~~~~~~~~~~------- 264 (662)
...|..... ..|..+..++.|++|+++++++|.+|++.++++.+.....+.... ..........
T Consensus 190 ~~~c~~~~~~~~~~~~~~~~~~~~f~iP~~ii~~~Y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (510)
T 4grv_A 190 GLVCTPIVDTATVKVVIQVNTFMSFLFPMLVISILNTVIANKLTVMVNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLT 269 (510)
T ss_dssp GEEEEECSCHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTSCTHHHHHHHHTCCEEEEEECTTSCEEEETTEECC
T ss_pred ccccccccccchhhhhhhhhhhHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhhccccccccccccccccccccccccccC
Confidence 223433332 235556677889999999999999999999875443221110000 0000000000
Q ss_pred ---eeeeccCCCCCCCCccCCCCCCcccccc------------ccc---------cCC----------------------
Q psy5093 265 ---TLRIHRGGTDHRHMTLHHTPSDDVEMDN------------VMS---------GHN---------------------- 298 (662)
Q Consensus 265 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~---------~~~---------------------- 298 (662)
.........+..............+.+. ... ...
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (510)
T 4grv_A 270 KSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGF 349 (510)
T ss_dssp CSSSHHHHHHSCCC---CCCTTBCCHHHHHHHHHHHHHHHHHHHHHCTTTHHHHHHSCSHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCCCCccccccCcCCCCCCCCcccCCccccccCCCCcccccccccCCCCCCCcCccccccccccCCccccCCCCCCCCC
Confidence 0000000000000000000000000000 000 000
Q ss_pred ---------Ccccccccccccccc-------------ccccccccccchhhHHhhhhhHHHHHHHHHHHHhhhhhHHHHH
Q psy5093 299 ---------GITRQVSNTRIIHKG-------------HIVKNFSLSRKLSKFAKEKKAAKTLGIVMGVFIVCWLPFFVVN 356 (662)
Q Consensus 299 ---------~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~f~i~~~P~~i~~ 356 (662)
.............+. ..+.....+++++..++|+|++||+++++++|++||+|++++.
T Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~erk~~k~L~iVv~~F~iCWlPf~i~~ 429 (510)
T 4grv_A 350 TNSLRMLNNKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYGSGSVQALRHGVLVARAVVIAFVVCWLPYHVRR 429 (510)
T ss_dssp HHHHHHHTTTCHHHHHHHHHSSCSCCSSHHHHHHHHHHHHHSSSGGGTTSTTTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CccccccccCCCcccccccccccccccCCccccccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000000000000000 0000111223334456789999999999999999999999999
Q ss_pred HHHHhhccccCCC---chhHHHHHHHHHHHHhhccccchhhhhcChhHHHHHHHhcccC
Q psy5093 357 LLSAVCTKCFWSE---QDEELISAVVTWLGWINSGMNPVIYACWSRDFRSKEKILNHKI 412 (662)
Q Consensus 357 ~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~ns~~nP~IY~~~~~~fR~~~~~l~~~~ 412 (662)
++..+.++..... ....++..++.+|+|+||++||+||+++|++||+++|++++++
T Consensus 430 l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~Y~NS~iNPiIY~~~n~~FR~aFk~iL~C~ 488 (510)
T 4grv_A 430 LMFCYISDEQWTTFLFDFYHYFYMLTNALAYASSAINPILYNLVSANFRQVFLSTLACL 488 (510)
T ss_dssp HHHHTTTTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCC--------
T ss_pred HHHHHcCcccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhc
Confidence 9987765433221 1234566788999999999999999999999999999987543
No 2
>3vw7_A Proteinase-activated receptor 1, lysozyme; high resolution structure, protease-activated receptor 1, in conformation, antagonist vorapaxar; HET: VPX OLC; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.1e-42 Score=372.39 Aligned_cols=372 Identities=17% Similarity=0.160 Sum_probs=238.8
Q ss_pred hhhHhHHhHHHHHHHHHHHHHHHHHHhhHhhhhheeccccccchhhHHHHHHHHHHHhhhhhcccHHHHHhhcccccccc
Q psy5093 42 ERWLELAQQRTLLVSTLSLFSLVTVFGNALVMIAVVRERYLHTSTNYFIMSLALADCLVGLVVMPFSALYELLDHNWIFG 121 (662)
Q Consensus 42 ~~~~~~~~~~~i~~~~~~ii~i~gl~gN~~vi~~i~~~~~lr~~~~~ll~~Lai~Dll~~l~~~p~~~~~~~~~~~~~~~ 121 (662)
++.++.+....+..+++.+++++|++||+++++++.+++++|+++++|++|||++|++.++ .+|+.+...+..+.|.++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~i~~~~i~gN~lvi~~~~~~~~l~~~~~~~l~~La~aDll~~~-~~~~~~~~~~~~~~~~~~ 89 (484)
T 3vw7_A 11 SGYLTSSWLTLFVPSVYTGVFVVSLPLNIMAIVVFILKMKVKKPAVVYMLHLATADVLFVS-VLPFKISYYFSGSDWQFG 89 (484)
T ss_dssp HHHHTCHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHT-THHHHHHHHHTTSCCCSC
T ss_pred ccCcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhcCCcccc
Confidence 3444566778889999999999999999999999999999999999999999999999965 477677777767789999
Q ss_pred ccchhHHHHhhHHHHHHHHHHHHHHHHHHhhhhcCCCCCCccccchhhhHHHHHHHHHHHhhhhhHHHhhhccccCCCCC
Q psy5093 122 LNWCDSWRSLDVLFSTASILNLCVISLDRYWAITDPLTYPSRMSTRRAYIWIAIVWICSGGISFPAILWWRAVRNEEVPK 201 (662)
Q Consensus 122 ~~~C~~~~~~~~~~~~~s~~~l~~iaidRy~~I~~P~~y~~~~t~~~~~~~i~~~w~~s~~~~~~~~~~~~~~~~~~~~~ 201 (662)
...|++..++..++..+|.+++++||+|||++|++|++|++.++++++..+++++|++++++++|+++.+..........
T Consensus 90 ~~~C~~~~~~~~~~~~~S~~~l~~is~dRy~aI~~P~~~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~~~~~ 169 (484)
T 3vw7_A 90 SELCRFVTAAFYCNMYASILLMTVISIDRFLAVVYPMQSLSWRTLGRASFTCLAIWALAIAGVVPLLLKEQTIQVPGLGI 169 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-----CCHHHHHHHHHHHHHHHHHHHHHHHTSCCEEEETTTTE
T ss_pred hhHHhHHHHHHHHHHHHHHHHHHHHHHHHheEEEcccccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999998876655444455
Q ss_pred CccccCCCcc--------hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCccccc-----CCCCCCccceeee
Q psy5093 202 NKCPFTDSKG--------YLIFSSTISFYLPLLVMVFTYFKIYRAAVVQTKSLKVGTKQVMS-----GSTSGEKELTLRI 268 (662)
Q Consensus 202 ~~c~~~~~~~--------~~~~~~~~~~~ip~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 268 (662)
..|....... |..+..++.+++|+++++++|++|++.++++.++.+..+..... ....+... ....
T Consensus 170 ~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~ii~~~Y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~t-i~~~ 248 (484)
T 3vw7_A 170 TTCHDVLSETLLEGYYAYYFSAFSAVFFFVPLIISTVCYVSIIRCLSSSANIFEMLRIDEGLRLKIYKNTEGYYT-IGIG 248 (484)
T ss_dssp EEESSSCSSCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHCCEEEEEECTTSCEE-EETT
T ss_pred ceeeccCCccchhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhHhhHHHHhhhhccchhhhhcccccccee-eecc
Confidence 5675443211 44556678899999999999999999999876533211110000 00000000 0000
Q ss_pred ccCCCCCC-----------CCccCCCCCCccccccc----------cccCC-Ccccccccc-------------------
Q psy5093 269 HRGGTDHR-----------HMTLHHTPSDDVEMDNV----------MSGHN-GITRQVSNT------------------- 307 (662)
Q Consensus 269 ~~~~~~~~-----------~~~~~~~~~~~~~~~~~----------~~~~~-~~~~~~~~~------------------- 307 (662)
+....... ...........++.+.. ..... .........
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 328 (484)
T 3vw7_A 249 HLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETG 328 (484)
T ss_dssp EEEESSSCHHHHHHHHHHHHTSCCSSBCCHHHHHHHHHHHHHHHHHHHHTCTTTHHHHTTSCHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCcchhcccccccccccccCCCCCCcccccccccccccccccccccccccCcccccccccccchhhccccccCccc
Confidence 00000000 00000000000000000 00000 000000000
Q ss_pred ------------------ccccc-ccccccc--------------ccccchhhHHhhhhhHHHHHHHHHHHHhhhhhHHH
Q psy5093 308 ------------------RIIHK-GHIVKNF--------------SLSRKLSKFAKEKKAAKTLGIVMGVFIVCWLPFFV 354 (662)
Q Consensus 308 ------------------~~~~~-~~~~~~~--------------~~~~~~~~~~~~~~~~~~l~~i~~~f~i~~~P~~i 354 (662)
..... +...... ...++..+.++++|++|++++++++|++||+|+.+
T Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~r~~k~l~~v~~~F~icwlP~~i 408 (484)
T 3vw7_A 329 VAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYANRSKKSRALFLSAAVFCIFIICFGPTNV 408 (484)
T ss_dssp HHTTHHHHHHHHTTCHHHHHHHHTTSHHHHHSHHHHHHHHHHHHHCSSHHHHCHHHHHHHHHHHHHHHHHHHHTTHHHHH
T ss_pred cccchhhhhhhhccchhhhhhhhhhhhhhccCcccccCccceeecchhccccchhHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 00000 0000000 00001124567889999999999999999999999
Q ss_pred HHHHHHhhccccCCCchhHHHHHHHHHHHHhhccccchhhhhcChhHHHHHHHhcccCCcc
Q psy5093 355 VNLLSAVCTKCFWSEQDEELISAVVTWLGWINSGMNPVIYACWSRDFRSKEKILNHKISPV 415 (662)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~nP~IY~~~~~~fR~~~~~l~~~~~~~ 415 (662)
+.++..+.............+..++.+|+++|+++||+||+++|++||+++++++|+.+..
T Consensus 409 ~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~ns~iNPiIY~~~~~~fR~~~~~ll~~~~~~ 469 (484)
T 3vw7_A 409 LLIAHYSFLSHTSTTEAAYFAYLLCVCVSSISCCIDPLIYYYASSECQRYVYSILCCKESS 469 (484)
T ss_dssp HHHHHHHTCTTCTTSHHHHHHHHHHHHHHTTHHHHHHHHHHHTSSCC--------------
T ss_pred HHHHHHHHhccccchhHHHHHHHHHHHHHHhccccchHHHHHhhHHHHHHHHHHHhhccCC
Confidence 9998866543333445556777889999999999999999999999999999977665443
No 3
>2rh1_A Beta-2-adrenergic receptor/T4-lysozyme chimera; GPCR, 7TM, fusion, lipidic cubic phase, lipidic, mesophase, cholesterol, membrane protein; HET: MAL CAU CLR PLM 12P; 2.40A {Homo sapiens} PDB: 3p0g_A* 3d4s_A* 3ny8_A* 3ny9_A* 3nya_A* 3pds_A*
Probab=100.00 E-value=5.9e-40 Score=351.39 Aligned_cols=358 Identities=34% Similarity=0.560 Sum_probs=238.4
Q ss_pred HhHHHHHHHHHHHHHHHHHHhhHhhhhheeccccccchhhHHHHHHHHHHHhhhhhcccHHHHHhhccccccccccchhH
Q psy5093 48 AQQRTLLVSTLSLFSLVTVFGNALVMIAVVRERYLHTSTNYFIMSLALADCLVGLVVMPFSALYELLDHNWIFGLNWCDS 127 (662)
Q Consensus 48 ~~~~~i~~~~~~ii~i~gl~gN~~vi~~i~~~~~lr~~~~~ll~~Lai~Dll~~l~~~p~~~~~~~~~~~~~~~~~~C~~ 127 (662)
+....+..+++.+++++|++||+++++++.+++++|++.++|++|||++|++.+++.+|+.+...+ .+.|.++...|++
T Consensus 37 ~~~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~l~~~~~~~l~nLAiaDll~~~~~~p~~~~~~~-~~~w~~~~~~C~~ 115 (500)
T 2rh1_A 37 EVWVVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHIL-MKMWTFGNFWCEF 115 (500)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHH-HTSCCSHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCcCCcchhhH
Confidence 344567888999999999999999999999999999999999999999999999988997766554 5689999999999
Q ss_pred HHHhhHHHHHHHHHHHHHHHHHHhhhhcCCCCCCccccchhhhHHHHHHHHHHHhhhhhHH-HhhhccccCC-----CCC
Q psy5093 128 WRSLDVLFSTASILNLCVISLDRYWAITDPLTYPSRMSTRRAYIWIAIVWICSGGISFPAI-LWWRAVRNEE-----VPK 201 (662)
Q Consensus 128 ~~~~~~~~~~~s~~~l~~iaidRy~~I~~P~~y~~~~t~~~~~~~i~~~w~~s~~~~~~~~-~~~~~~~~~~-----~~~ 201 (662)
..++..+...+|++++++||+|||++|++|++|++.++++++..+++++|+++++++++++ +.+....... ...
T Consensus 116 ~~~~~~~~~~~Si~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~W~~s~~~~~~p~~~~~~~~~~~~~~~c~~~~ 195 (500)
T 2rh1_A 116 WTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYRATHQEAINCYAEE 195 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSTTSCSSCHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCSHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHeeccCcCCeeecccceeehhhHHHHHHHHHHhcchheeeecccccCcceecccc
Confidence 9999999999999999999999999999999999999999999999999999999996544 3332221100 011
Q ss_pred CccccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCcc------cccCCCCC-----------Cccc
Q psy5093 202 NKCPFTDSKGYLIFSSTISFYLPLLVMVFTYFKIYRAAVVQTKSLKVGTKQ------VMSGSTSG-----------EKEL 264 (662)
Q Consensus 202 ~~c~~~~~~~~~~~~~~~~~~ip~~ii~~~y~~I~~~l~~~~~~~~~~~~~------~~~~~~~~-----------~~~~ 264 (662)
.+|.......|..+..++.+++|+++++++|++|++.++++.++.+..+.. ........ ....
T Consensus 196 ~~~~~~~~~~y~~~~~~~~~~iPl~ii~~~Y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (500)
T 2rh1_A 196 TCCDFFTNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSL 275 (500)
T ss_dssp TCCCCCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHCSHHHHHHHHTCCEEEEEECTTSCEEEETTEEEESCSCH
T ss_pred cccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccccccCCCCCCCCCCcccc
Confidence 122333445577777788899999999999999999999987651110000 00000000 0000
Q ss_pred e----------eeeccCCCC-------------------------C-------------------C----------CCcc
Q psy5093 265 T----------LRIHRGGTD-------------------------H-------------------R----------HMTL 280 (662)
Q Consensus 265 ~----------~~~~~~~~~-------------------------~-------------------~----------~~~~ 280 (662)
. .+.+.+... . . ....
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (500)
T 2rh1_A 276 NAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLR 355 (500)
T ss_dssp HHHHHHHHHHHTSCCTTBCCHHHHHHHHHHHHHHHHHHHHHCTTTHHHHHHSCHHHHHHHHHHHHHHHHHHHHTCHHHHH
T ss_pred cccccccccccCCCCCCccchhhhhhcccCCccccccccccCCCCCCCCCcccccccchhhcccCCCCccccccccCchh
Confidence 0 000000000 0 0 0000
Q ss_pred CCCCCCccccccccccCCCccccccccccccccccccccccccchhhHHhhhhhHHHHHHHHHHHHhhhhhHHHHHHHHH
Q psy5093 281 HHTPSDDVEMDNVMSGHNGITRQVSNTRIIHKGHIVKNFSLSRKLSKFAKEKKAAKTLGIVMGVFIVCWLPFFVVNLLSA 360 (662)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~f~i~~~P~~i~~~~~~ 360 (662)
........+..............+.... +..........++.+..++|+|++|++++++++|++||+|++++.++..
T Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~e~ka~ktl~ivv~~F~icWlP~~i~~l~~~ 432 (500)
T 2rh1_A 356 MLQQKRWDEAAVNLAKSRWYNQTPNRAK---RVITTFRTGTWDAYKFCLKEHKALKTLGIIMGTFTLCWLPFFIVNIVHV 432 (500)
T ss_dssp HHHTTCHHHHHHHHTTSHHHHHSHHHHH---HHHHHHHHSSSGGGTTCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhcccccccccccccccccCCCCcccc---cccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000011000000000000000000000 0000000000111222347899999999999999999999999999887
Q ss_pred hhccccCCCchhHHHHHHHHHHHHhhccccchhhhhcChhHHHHHHHhcccCCcc
Q psy5093 361 VCTKCFWSEQDEELISAVVTWLGWINSGMNPVIYACWSRDFRSKEKILNHKISPV 415 (662)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~l~~~ns~~nP~IY~~~~~~fR~~~~~l~~~~~~~ 415 (662)
+.. ...+..+..+..+|+++|+++||+||++ |++||+++++++|+++..
T Consensus 433 ~~~-----~~~~~~~~~~~~~L~y~NS~iNPiIY~~-n~~FR~af~~il~~~~~~ 481 (500)
T 2rh1_A 433 IQD-----NLIRKEVYILLNWIGYVNSGFNPLIYCR-SPDFRIAFQELLCLRRSS 481 (500)
T ss_dssp HST-----TSSCHHHHHHHHHHHHHGGGTHHHHGGG-SHHHHHHHHHHTTC----
T ss_pred HcC-----CcccHHHHHHHHHHHHHHHhhcchhhhc-cHHHHHHHHHHHhhhccC
Confidence 753 2335667888999999999999999985 999999999998766544
No 4
>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G protein-coupled receptor, GPCR, SI protein-antagonist complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A*
Probab=100.00 E-value=1.3e-41 Score=362.41 Aligned_cols=362 Identities=27% Similarity=0.430 Sum_probs=246.0
Q ss_pred HhHHHHHHHHHHHHHHHHHHhhHhhhhheeccccccchhhHHHHHHHHHHHhhhhhcccHHHHHhhccccccccccchhH
Q psy5093 48 AQQRTLLVSTLSLFSLVTVFGNALVMIAVVRERYLHTSTNYFIMSLALADCLVGLVVMPFSALYELLDHNWIFGLNWCDS 127 (662)
Q Consensus 48 ~~~~~i~~~~~~ii~i~gl~gN~~vi~~i~~~~~lr~~~~~ll~~Lai~Dll~~l~~~p~~~~~~~~~~~~~~~~~~C~~ 127 (662)
.....+..+++.+++++|++||+++++++.+++++|++.++|++|||++|++.+++.+|+.+.... .+.|.++...|++
T Consensus 20 ~~~~~~~~~~~~~~~~~g~~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~-~~~~~~~~~~C~~ 98 (467)
T 3uon_A 20 TFEVVFIVLVAGSLSLVTIIGNILVMVSIKVNRHLQTVNNYFLFSLACADLIIGVFSMNLYTLYTV-IGYWPLGPVVCDL 98 (467)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHTHHHHHHHHHH-SSSCCSCHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHheeeeeecCccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCccCCcchHhH
Confidence 344677889999999999999999999999999999999999999999999999998997666554 5689999999999
Q ss_pred HHHhhHHHHHHHHHHHHHHHHHHhhhhcCCCCCCccccchhhhHHHHHHHHHHHhhhhhHHHhhhcccc-CCCCCCcccc
Q psy5093 128 WRSLDVLFSTASILNLCVISLDRYWAITDPLTYPSRMSTRRAYIWIAIVWICSGGISFPAILWWRAVRN-EEVPKNKCPF 206 (662)
Q Consensus 128 ~~~~~~~~~~~s~~~l~~iaidRy~~I~~P~~y~~~~t~~~~~~~i~~~w~~s~~~~~~~~~~~~~~~~-~~~~~~~c~~ 206 (662)
..++..++..+|.+++++||+|||++|++|++|++.++++++..+++++|++++++++|+++.+..... .......|..
T Consensus 99 ~~~~~~~~~~~s~~~l~~isidRy~ai~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~ 178 (467)
T 3uon_A 99 WLALDYVVSNASVMNLLIISFDRYFCVTKPLTYPVKRTTKMAGMMIAAAWVLSFILWAPAILFWQFIVGVRTVEDGECYI 178 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTTSGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCSSCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCccee
Confidence 999999999999999999999999999999999999999999999999999999999999888765422 2334445644
Q ss_pred C--CCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCcccccCCC---CCCccceeeeccCCCCCCCC---
Q psy5093 207 T--DSKGYLIFSSTISFYLPLLVMVFTYFKIYRAAVVQTKSLKVGTKQVMSGST---SGEKELTLRIHRGGTDHRHM--- 278 (662)
Q Consensus 207 ~--~~~~~~~~~~~~~~~ip~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~--- 278 (662)
. ....|..+..++.+++|+++++++|++|++.++++.++.+........... ..........+.........
T Consensus 179 ~~~~~~~~~~~~~~~~~~~p~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (467)
T 3uon_A 179 QFFSNAAVTFGTAIAAFYLPVIIMTVLYWHISRASKSRINIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAA 258 (467)
T ss_dssp GGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHSCCEEEEEECTTSCEEEETTEECCCCSSHHHH
T ss_pred ecCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhhcccccceeeccchhhcccccCcccccCCccccc
Confidence 3 344566777888899999999999999999999876543322111100000 00000000000000000000
Q ss_pred ---------ccCCCCCCcccccc------------ccccCCCccc--------------------------cc------c
Q psy5093 279 ---------TLHHTPSDDVEMDN------------VMSGHNGITR--------------------------QV------S 305 (662)
Q Consensus 279 ---------~~~~~~~~~~~~~~------------~~~~~~~~~~--------------------------~~------~ 305 (662)
..+.......+... ...+...... .. +
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (467)
T 3uon_A 259 KSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQ 338 (467)
T ss_dssp HHHHHHHHSSCCTTBCCHHHHHHHHHHHHHHHHHHHHTCTTTHHHHHHSCHHHHHHHHHHHHHHHHHHHGGGHHHHHHHH
T ss_pred ccccccccccCCCCcccccccccccccccchhhcccccCCCCCccccccccccccccccceeeccccCCCccccccchhh
Confidence 00000000000000 0000000000 00 0
Q ss_pred ccc----ccc-cccc---cc-----------ccccccchhhHHhhhhhHHHHHHHHHHHHhhhhhHHHHHHHHHhhcccc
Q psy5093 306 NTR----IIH-KGHI---VK-----------NFSLSRKLSKFAKEKKAAKTLGIVMGVFIVCWLPFFVVNLLSAVCTKCF 366 (662)
Q Consensus 306 ~~~----~~~-~~~~---~~-----------~~~~~~~~~~~~~~~~~~~~l~~i~~~f~i~~~P~~i~~~~~~~~~~~~ 366 (662)
..+ ... .... .. ........+..++++|+++++++++++|++||+|+.++.++..+...
T Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~k~l~~iv~~F~icw~P~~i~~~~~~~~~~-- 416 (467)
T 3uon_A 339 QKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYPPPSREKKVTRTILAILLAFIITWAPYNVMVLINTFCAP-- 416 (467)
T ss_dssp TTCHHHHHHHHTTSHHHHHSHHHHHHHHHHHHHSSSTTSCCCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCST--
T ss_pred hcCccccccccccccccCCCCcccccccchhhcccccccccchHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhc--
Confidence 000 000 0000 00 00000111122478999999999999999999999999999877542
Q ss_pred CCCchhHHHHHHHHHHHHhhccccchhhhhcChhHHHHHHHhcccCCcc
Q psy5093 367 WSEQDEELISAVVTWLGWINSGMNPVIYACWSRDFRSKEKILNHKISPV 415 (662)
Q Consensus 367 ~~~~~~~~~~~~~~~l~~~ns~~nP~IY~~~~~~fR~~~~~l~~~~~~~ 415 (662)
.....+..+..++.++|+++||+||+++|++||++++++++++++.
T Consensus 417 ---~~~~~~~~i~~~L~~~ns~~NPiIY~~~~~~fR~~~~~ll~c~~~~ 462 (467)
T 3uon_A 417 ---CIPNTVWTIGYWLCYINSTINPACYALCNATFKKTFKHLLMCHYKN 462 (467)
T ss_dssp ---TSCHHHHHHHHHHHHHTTTHHHHHHHHHCHHHHHHHHHHCC-----
T ss_pred ---ccchHHHHHHHHHHHHhhhhhhHHHHHcCHHHHHHHHHHHhhhccC
Confidence 2346778899999999999999999999999999999998665543
No 5
>3odu_A C-X-C chemokine receptor type 4, lysozyme chimera; structural genomics, PSI-2, protein structure initiative; HET: ITD OLC OLA; 2.50A {Homo sapiens} PDB: 3oe8_A* 3oe6_A* 3oe0_A* 3oe9_A* 2k03_B* 2k04_B 2k05_B*
Probab=100.00 E-value=5.8e-42 Score=368.54 Aligned_cols=366 Identities=19% Similarity=0.237 Sum_probs=246.0
Q ss_pred hHHhHHHHHHHHHHHHHHHHHHhhHhhhhheeccccccchhhHHHHHHHHHHHhhhhhcccHHHHHhhccccccccccch
Q psy5093 46 ELAQQRTLLVSTLSLFSLVTVFGNALVMIAVVRERYLHTSTNYFIMSLALADCLVGLVVMPFSALYELLDHNWIFGLNWC 125 (662)
Q Consensus 46 ~~~~~~~i~~~~~~ii~i~gl~gN~~vi~~i~~~~~lr~~~~~ll~~Lai~Dll~~l~~~p~~~~~~~~~~~~~~~~~~C 125 (662)
.....+.+..+++.+++++|++||+++++++.+++++|++.++|++|||++|++.+ +.+|+.+.... ..|.++...|
T Consensus 43 ~~~~~~~~~~~~~~~i~~~g~~gN~lvi~~~~~~~~l~~~~~~~l~~La~~Dll~~-~~~p~~~~~~~--~~~~~~~~~C 119 (502)
T 3odu_A 43 NANFNKIFLPTIYSIIFLTGIVGNGLVILVMGYQKKLRSMTDKYRLHLSVADLLFV-ITLPFWAVDAV--ANWYFGNFLC 119 (502)
T ss_dssp CCTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHHH-TTHHHHHHHHH--TCCCSHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHh--cCCcCCchhh
Confidence 44556788999999999999999999999999999999999999999999999994 67887666554 3699999999
Q ss_pred hHHHHhhHHHHHHHHHHHHHHHHHHhhhhcCCCCCCccccchhhhHHHHHHHHHHHhhhhhHHHhhhccccCCCCCCccc
Q psy5093 126 DSWRSLDVLFSTASILNLCVISLDRYWAITDPLTYPSRMSTRRAYIWIAIVWICSGGISFPAILWWRAVRNEEVPKNKCP 205 (662)
Q Consensus 126 ~~~~~~~~~~~~~s~~~l~~iaidRy~~I~~P~~y~~~~t~~~~~~~i~~~w~~s~~~~~~~~~~~~~~~~~~~~~~~c~ 205 (662)
++..++..++..+|.+++++||+|||++|++|++|++.++++++..+++++|++++++++|+++........ ....|.
T Consensus 120 ~~~~~~~~~~~~~s~~~l~~is~dRy~ai~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~--~~~~C~ 197 (502)
T 3odu_A 120 KAVHVIYTVNLYSSVWILAFISLDRYLAIVHATNSQRPRKLLAEKVVYVGVWIPALLLTIPDFIFANVSEAD--DRYICD 197 (502)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHTHHHHHTHHHHHHTTHHHHHHEEEEECS--SSEEEE
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhheecccccccccchhHHHHhhhHHHHHHHHHHHHHHHheeeeccC--CceEEe
Confidence 999999999999999999999999999999999999999999999999999999999999998876544322 344564
Q ss_pred cCCCc-----chhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCcccccCCCCCCcc----ceeee--ccCCCC
Q psy5093 206 FTDSK-----GYLIFSSTISFYLPLLVMVFTYFKIYRAAVVQTKSLKVGTKQVMSGSTSGEKE----LTLRI--HRGGTD 274 (662)
Q Consensus 206 ~~~~~-----~~~~~~~~~~~~ip~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~--~~~~~~ 274 (662)
..... .|.+...++.+++|+++++++|++|++.++++.++.+.........+...... ..... .....+
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~p~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (502)
T 3odu_A 198 RFYPNDLWVVVFQFQHIMVGLILPGIVILSCYCIIISKLSHSGSNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSP 277 (502)
T ss_dssp ECCSSHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHGGGCSCCHHHHHHHHTCCEEEEEECTTSCEEEETTEEEECSS
T ss_pred ecCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhhhhhhhccccccccCCCccccccccccccCcCc
Confidence 33322 24445667788999999999999999999987665433221111110000000 00000 000000
Q ss_pred CCCC-------ccCCCCC---Ccccccc----------ccccCCCcccc--cccc-------------------------
Q psy5093 275 HRHM-------TLHHTPS---DDVEMDN----------VMSGHNGITRQ--VSNT------------------------- 307 (662)
Q Consensus 275 ~~~~-------~~~~~~~---~~~~~~~----------~~~~~~~~~~~--~~~~------------------------- 307 (662)
.... ....... ..++... ........... .+..
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (502)
T 3odu_A 278 SLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNS 357 (502)
T ss_dssp CHHHHHHHHHHHHTSCCTTBCCHHHHHHHHHHHHHHHHHHHTTCTTTHHHHHTCCHHHHHHHHHHHHHHHHHHHHTCHHH
T ss_pred cccccchhhhcccCcchhhhhhccccccchhhcccccccccccCccccccccCCCCCCcchhhhhhhhhchhhcccCccc
Confidence 0000 0000000 0000000 00000000000 0000
Q ss_pred ---------------------------ccccccccccccccccchhhHHhhhhhHHHHHHHHHHHHhhhhhHHHHHHHHH
Q psy5093 308 ---------------------------RIIHKGHIVKNFSLSRKLSKFAKEKKAAKTLGIVMGVFIVCWLPFFVVNLLSA 360 (662)
Q Consensus 308 ---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~f~i~~~P~~i~~~~~~ 360 (662)
+........+....++...+.++++|+++++++++++|++||+|+.++.++..
T Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~k~~k~l~~vv~~F~icw~P~~i~~~~~~ 437 (502)
T 3odu_A 358 LRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYGSKGHQKRKALKTTVILILAFFACWLPYYIGISIDS 437 (502)
T ss_dssp HHHHHHTCHHHHHHHHTTSHHHHHSHHHHHHHHHHHHHCSSHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchhhhchhhhhccccccccccccCcchhhhccccccccccchhhhhhHhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 00000000000001111234557899999999999999999999999998877
Q ss_pred hhccccCC-----CchhHHHHHHHHHHHHhhccccchhhhhcChhHHHHHHHhcccCCccc
Q psy5093 361 VCTKCFWS-----EQDEELISAVVTWLGWINSGMNPVIYACWSRDFRSKEKILNHKISPVV 416 (662)
Q Consensus 361 ~~~~~~~~-----~~~~~~~~~~~~~l~~~ns~~nP~IY~~~~~~fR~~~~~l~~~~~~~~ 416 (662)
+....... ......+..++.+|.++|+++||+||+++|++||++++++++++++..
T Consensus 438 ~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~ns~~NPiIY~~~~~~fR~~~~~ll~~~~~~~ 498 (502)
T 3odu_A 438 FILLEIIKQGCEFENTVHKWISITEALAFFHCCLNPILYAFLGAKFKTSAQHALTSGRPLE 498 (502)
T ss_dssp HHHTTSSCCCHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTTTTCCCCCCHHHHHSSCSSCG
T ss_pred HHHHHhhhhccccccchHHHHHHHHHHHHHhcccchhhhhhcCHHHHHHHHHHhccCCchh
Confidence 64221111 223445567888999999999999999999999999999998877654
No 6
>3pbl_A D(3) dopamine receptor, lysozyme chimera; structural genomics, PSI-2, PSI-biology, protein structure initiative; HET: ETQ MAL; 2.89A {Homo sapiens}
Probab=100.00 E-value=3.3e-41 Score=360.62 Aligned_cols=356 Identities=31% Similarity=0.527 Sum_probs=240.6
Q ss_pred hHHHHHHHHHHHHHHHHHHhhHhhhhheeccccccchhhHHHHHHHHHHHhhhhhcccHHHHHhhccccccccccchhHH
Q psy5093 49 QQRTLLVSTLSLFSLVTVFGNALVMIAVVRERYLHTSTNYFIMSLALADCLVGLVVMPFSALYELLDHNWIFGLNWCDSW 128 (662)
Q Consensus 49 ~~~~i~~~~~~ii~i~gl~gN~~vi~~i~~~~~lr~~~~~ll~~Lai~Dll~~l~~~p~~~~~~~~~~~~~~~~~~C~~~ 128 (662)
....+..+++.+++++|++||+++++++.+++++|++.++|++|||++|++.+++.+|+.+...+..+.|.++...|++.
T Consensus 36 ~~~~~~~~~~~~~~~~g~~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~~~~~~~~~~~~C~~~ 115 (481)
T 3pbl_A 36 RPHAYYALSYCALILAIVFGNGLVCMAVLKERALQTTTNYLVVSLAVADLLVATLVMPWVVYLEVTGGVWNFSRICCDVF 115 (481)
T ss_dssp -----CCSHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTTSCCCSCHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHhHHhhhccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCcchhhhH
Confidence 34567788899999999999999999999999999999999999999999999999998777776667899999999999
Q ss_pred HHhhHHHHHHHHHHHHHHHHHHhhhhcCCCCC---CccccchhhhHHHHHHHHHHHhhhhhHHHhhhccccCCCCCCccc
Q psy5093 129 RSLDVLFSTASILNLCVISLDRYWAITDPLTY---PSRMSTRRAYIWIAIVWICSGGISFPAILWWRAVRNEEVPKNKCP 205 (662)
Q Consensus 129 ~~~~~~~~~~s~~~l~~iaidRy~~I~~P~~y---~~~~t~~~~~~~i~~~w~~s~~~~~~~~~~~~~~~~~~~~~~~c~ 205 (662)
.++..++..+|.+++++||+|||++|++|++| .+..+.+++..+++++|++++++++|+++.+... .....|.
T Consensus 116 ~~~~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~----~~~~~C~ 191 (481)
T 3pbl_A 116 VTLDVMMCTASIWNLCAISIDRYTAVVMPVHYQHGTGQSSCRRVALMITAVWVLAFAVSCPLLFGFNTT----GDPTVCS 191 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHTTSSSCHHHHHHHHHHHHHHHHHHHHHHHTTTCCC----SSTTCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHheeccc----CCCCccc
Confidence 99999999999999999999999999999998 6788999999999999999999999988865432 2334565
Q ss_pred cCCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCcccccCCCCCCccceeeeccCCCCCCCCccCCCCC
Q psy5093 206 FTDSKGYLIFSSTISFYLPLLVMVFTYFKIYRAAVVQTKSLKVGTKQVMSGSTSGEKELTLRIHRGGTDHRHMTLHHTPS 285 (662)
Q Consensus 206 ~~~~~~~~~~~~~~~~~ip~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (662)
.. ...|..+..++.+++|+++++++|+.|++.++++.++.......................... ...+........
T Consensus 192 ~~-~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 268 (481)
T 3pbl_A 192 IS-NPDFVIYSSVVSFYLPFGVTVLVYARIYVVLKQRRRKNIFEMLRIDEGLRLKIYKDTEGYYTI--GIGHLLTKSPSL 268 (481)
T ss_dssp CC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCSSCEECSSSCEEE--TTTEEEESSSCH
T ss_pred cc-CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhccccchhccccccCcccceee--cccccccCCccc
Confidence 44 334667778888999999999999999999998765433221111100000000000000000 000000000000
Q ss_pred Cccc--ccccc-ccCCCccc-cc---------------------------------------------------------
Q psy5093 286 DDVE--MDNVM-SGHNGITR-QV--------------------------------------------------------- 304 (662)
Q Consensus 286 ~~~~--~~~~~-~~~~~~~~-~~--------------------------------------------------------- 304 (662)
.... .+... .+.++... ..
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (481)
T 3pbl_A 269 NAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLR 348 (481)
T ss_dssp HHHHHHHHHHHTSCCTTCCCHHHHHHHHHHHHHHHHHHHHHCTTTHHHHHTSCHHHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred ccCCCcccchhccCCCceeccCCchhcccCCcccccccccccCccCccccccccccchhccccccccCCCCCCCcccccc
Confidence 0000 00000 00000000 00
Q ss_pred --cccc-----ccccccccccc--------------ccccchhhHHhhhhhHHHHHHHHHHHHhhhhhHHHHHHHHHhhc
Q psy5093 305 --SNTR-----IIHKGHIVKNF--------------SLSRKLSKFAKEKKAAKTLGIVMGVFIVCWLPFFVVNLLSAVCT 363 (662)
Q Consensus 305 --~~~~-----~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~l~~i~~~f~i~~~P~~i~~~~~~~~~ 363 (662)
...+ .........+. ...+.....++++|+++++++++++|++||+|+.+..++..+.+
T Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~k~l~~iv~~F~icw~P~~i~~~~~~~~~ 428 (481)
T 3pbl_A 349 MLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYGVPLREKKATQMVAIVLGAFIVCWLPFFLTHVLNTHCQ 428 (481)
T ss_dssp HHHTTCHHHHHHHHHTSHHHHHSHHHHHHHHHHHHHSSSTTSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCS
T ss_pred hhccccccccchhhhccccccCCcccccccceeecccccccccccchhhhHHHHHHHHHHHHHHHhhHHHHHHHHHhccc
Confidence 0000 00000000000 00011112236899999999999999999999999999887654
Q ss_pred cccCCCchhHHHHHHHHHHHHhhccccchhhhhcChhHHHHHHHhcccCCcc
Q psy5093 364 KCFWSEQDEELISAVVTWLGWINSGMNPVIYACWSRDFRSKEKILNHKISPV 415 (662)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~l~~~ns~~nP~IY~~~~~~fR~~~~~l~~~~~~~ 415 (662)
. ......+..+..+|.++|+++||+||+++|++||++++++++++++.
T Consensus 429 ~----~~~~~~~~~~~~~L~~~ns~~NPiIY~~~~~~fR~~~~~ll~c~~~~ 476 (481)
T 3pbl_A 429 T----CHVSPELYSATTWLGYVNSALNPVIYTTFNIEFRKAFLKILSCGRPL 476 (481)
T ss_dssp S----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCC----
T ss_pred c----ccCcHHHHHHHHHHHHHhhccchHHHHHcCHHHHHHHHHHHhccCcH
Confidence 2 23456677889999999999999999999999999999998765544
No 7
>3rze_A Histamine H1 receptor, lysozyme chimera; structural genomics, PSI-biology, membrane protein, GPCR NET GPCR, hydrolase; HET: 5EH D7V OLC; 3.10A {Homo sapiens}
Probab=100.00 E-value=9.1e-41 Score=354.26 Aligned_cols=362 Identities=30% Similarity=0.435 Sum_probs=238.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhHhhhhheeccccccchhhHHHHHHHHHHHhhhhhcccHHHHHhhccccccccccchhHHH
Q psy5093 50 QRTLLVSTLSLFSLVTVFGNALVMIAVVRERYLHTSTNYFIMSLALADCLVGLVVMPFSALYELLDHNWIFGLNWCDSWR 129 (662)
Q Consensus 50 ~~~i~~~~~~ii~i~gl~gN~~vi~~i~~~~~lr~~~~~ll~~Lai~Dll~~l~~~p~~~~~~~~~~~~~~~~~~C~~~~ 129 (662)
...++.+++.+++++|++||+++++++.+++++|++.++|++|||++|++.+++.+|+.+.... .+.|.++...|++..
T Consensus 7 ~~~~~~~~~~~~~~~gi~gN~~vi~~~~~~~~~~~~~~~~l~~La~~Dll~~~~~~p~~~~~~~-~~~~~~~~~~C~~~~ 85 (452)
T 3rze_A 7 QLMPLVVVLSTICLVTVGLNLLVLYAVRSERKLHTVGNLYIVSLSVADLIVGAVVMPMNILYLL-MSKWSLGRPLCLFWL 85 (452)
T ss_dssp --CGGGTHHHHHHHHHHHHHHHHHHHHHHCSTTCCGGGHHHHHHHHHHHHHHHTHHHHHHHHHH-SSSCSSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCccCCchhHhHHH
Confidence 3456778899999999999999999999999999999999999999999999999997766554 568999999999999
Q ss_pred HhhHHHHHHHHHHHHHHHHHHhhhhcCCCCCCccccchhhhHHHHHHHHHHHhhhhhHHHhhhcccc-CCCCCCcccc--
Q psy5093 130 SLDVLFSTASILNLCVISLDRYWAITDPLTYPSRMSTRRAYIWIAIVWICSGGISFPAILWWRAVRN-EEVPKNKCPF-- 206 (662)
Q Consensus 130 ~~~~~~~~~s~~~l~~iaidRy~~I~~P~~y~~~~t~~~~~~~i~~~w~~s~~~~~~~~~~~~~~~~-~~~~~~~c~~-- 206 (662)
++..++..+|.+++++||+|||++|++|++|++.++++++..+++++|++++++++|.+........ .......|..
T Consensus 86 ~~~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~~C~~~~ 165 (452)
T 3rze_A 86 SMDYVASTASIFSVFILCIDRYRSVQQPLRYLKYRTKTRASATILGAWFLSFLWVIPILGWNHFMQQTSVRREDKCETDF 165 (452)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCSCCTTTTSSHHHHHHHHHHHHHHHGGGHHHHHCCCC-------CCSSSSCCSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHheeCccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCCeecCCC
Confidence 9999999999999999999999999999999999999999999999999999999885543222111 1123445533
Q ss_pred CCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCcccccCC----CCCCccceeeeccCCCCCCCC----
Q psy5093 207 TDSKGYLIFSSTISFYLPLLVMVFTYFKIYRAAVVQTKSLKVGTKQVMSGS----TSGEKELTLRIHRGGTDHRHM---- 278 (662)
Q Consensus 207 ~~~~~~~~~~~~~~~~ip~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~---- 278 (662)
.....|..+..++.+++|+++++++|+.|++.++++.++.+.......... ...........+.........
T Consensus 166 ~~~~~~~~~~~~~~~~~p~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (452)
T 3rze_A 166 YDVTWFKVMTAIINFYLPTLLMLWFYAKIYKAVRQHCNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKS 245 (452)
T ss_dssp TTCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHCEEEEEEECTTSCEEEEETEECSSCSSHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHhhhhhhhhhhhcccCCcccccccccccccCCCCCcccc
Confidence 334456677788889999999999999999999876554322111100000 000000000000000000000
Q ss_pred -------ccCCCCCCccccccc------------cccCCCcccc----------------------ccccc---------
Q psy5093 279 -------TLHHTPSDDVEMDNV------------MSGHNGITRQ----------------------VSNTR--------- 308 (662)
Q Consensus 279 -------~~~~~~~~~~~~~~~------------~~~~~~~~~~----------------------~~~~~--------- 308 (662)
.........+..... .......... .++..
T Consensus 246 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (452)
T 3rze_A 246 ELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQK 325 (452)
T ss_dssp HHHHHHTSCCTTBCCHHHHHHHHHHHHHHHHHHHHTCTTTHHHHHHSCHHHHHHHHHHHHHHCHHHHTSCHHHHHHHHTT
T ss_pred cccCCCCCCCCccccCCcccchhcCCCcccccCcccccccCCcccCCCccccccccccccccCCCCCCccccCcchhhhc
Confidence 000000000000000 0000000000 00000
Q ss_pred ---------ccccccccc-----------ccccccchhhHHhhhhhHHHHHHHHHHHHhhhhhHHHHHHHHHhhccccCC
Q psy5093 309 ---------IIHKGHIVK-----------NFSLSRKLSKFAKEKKAAKTLGIVMGVFIVCWLPFFVVNLLSAVCTKCFWS 368 (662)
Q Consensus 309 ---------~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~l~~i~~~f~i~~~P~~i~~~~~~~~~~~~~~ 368 (662)
......... .....++..+.++++|+++++++++++|++||+|+.++.++..+.+..
T Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~k~l~~vv~~f~icwlP~~i~~l~~~~~~~~--- 402 (452)
T 3rze_A 326 RWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYLHMNRERKAAKQLGFIMAAFILCWIPYFIFFMVIAFCKNC--- 402 (452)
T ss_dssp CHHHHHHHHTTSHHHHHSHHHHHHHHHHHHHSSSGGGCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCC---
T ss_pred CCccccccccCCccCCCCCcccchhhhhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhccc---
Confidence 000000000 000111112345889999999999999999999999999998876532
Q ss_pred CchhHHHHHHHHHHHHhhccccchhhhhcChhHHHHHHHhcccCCcccc
Q psy5093 369 EQDEELISAVVTWLGWINSGMNPVIYACWSRDFRSKEKILNHKISPVVF 417 (662)
Q Consensus 369 ~~~~~~~~~~~~~l~~~ns~~nP~IY~~~~~~fR~~~~~l~~~~~~~~~ 417 (662)
....+..+..+|.++|+++||+||+++|++||+++++++++++....
T Consensus 403 --~~~~~~~~~~~L~~~ns~~NPiIY~~~~~~fR~~~~~ll~~~~~~~~ 449 (452)
T 3rze_A 403 --CNEHLHMFTIWLGYINSTLNPLIYPLCNENFKKTFKRILHIRSGENL 449 (452)
T ss_dssp --SCTTTHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHTC------
T ss_pred --ccHHHHHHHHHHHHHHhcccchhhhhccHHHHHHHHHHHHhcccccc
Confidence 23445568889999999999999999999999999999887765543
No 8
>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A*
Probab=100.00 E-value=2.2e-40 Score=355.05 Aligned_cols=362 Identities=24% Similarity=0.344 Sum_probs=244.8
Q ss_pred hHHHHHHHHHHHHHHHHHHhhHhhhhheeccccccchhhHHHHHHHHHHHhhhhhcccHHHHHhhccccccccccchhHH
Q psy5093 49 QQRTLLVSTLSLFSLVTVFGNALVMIAVVRERYLHTSTNYFIMSLALADCLVGLVVMPFSALYELLDHNWIFGLNWCDSW 128 (662)
Q Consensus 49 ~~~~i~~~~~~ii~i~gl~gN~~vi~~i~~~~~lr~~~~~ll~~Lai~Dll~~l~~~p~~~~~~~~~~~~~~~~~~C~~~ 128 (662)
....+..+++.+++++|++||+++++++.+++++|++.++|++|||++|++.+++.+|+.+... ..|..+...|++.
T Consensus 19 ~~~~~~~~~~~~i~~~gi~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~---~~~~~~~~~C~~~ 95 (488)
T 3eml_A 19 MGSSVYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAITIS---TGFCAACHGCLFI 95 (488)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSSHHHHHHHHHHHHHHHHHTHHHHHHHHT---TCCEECHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHHHHHHHhhhheeeccccCChHHHHHHHHHHHHHHHHHHHHHHHHHHh---ccccccchHHHHH
Confidence 3456788999999999999999999999999999999999999999999999999899766543 2678889999999
Q ss_pred HHhhHHHHHHHHHHHHHHHHHHhhhhcCCCCCCccccchhhhHHHHHHHHHHHhhhhhHHHhhhccccC---CCCCCccc
Q psy5093 129 RSLDVLFSTASILNLCVISLDRYWAITDPLTYPSRMSTRRAYIWIAIVWICSGGISFPAILWWRAVRNE---EVPKNKCP 205 (662)
Q Consensus 129 ~~~~~~~~~~s~~~l~~iaidRy~~I~~P~~y~~~~t~~~~~~~i~~~w~~s~~~~~~~~~~~~~~~~~---~~~~~~c~ 205 (662)
.++..++..+|.+++++||+|||++|++|++|++.++++++..+++++|++++++++|+++.+...... ......|.
T Consensus 96 ~~~~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~s~~~~~~~~~~~~~~~~~~~~~~~~~~c~ 175 (488)
T 3eml_A 96 ACFVLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNNCGQPKEGKNHSQGCG 175 (488)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHSCGGGSTTTSCHHHHHHHHHHHHHHHHHHHTTGGGTCCSSCC-------CCSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhheeEecccccccccCHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccc
Confidence 999999999999999999999999999999999999999999999999999999999999877654332 12223343
Q ss_pred cCC----------CcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCcccccC-----CCCCCcc-ceeeec
Q psy5093 206 FTD----------SKGYLIFSSTISFYLPLLVMVFTYFKIYRAAVVQTKSLKVGTKQVMSG-----STSGEKE-LTLRIH 269 (662)
Q Consensus 206 ~~~----------~~~~~~~~~~~~~~ip~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~-----~~~~~~~-~~~~~~ 269 (662)
... ...+..+..++.+++|+++++++|++|++.++++.++.+......... ...+... ......
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (488)
T 3eml_A 176 EGQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLL 255 (488)
T ss_dssp TTCEECCHHHHSCHHHHHTTTHHHHTHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHTCCEEEEEECTTSCEEEETTEEE
T ss_pred cccceeeccccccchhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhhccccccchhhccccccceeccccccC
Confidence 322 122444557788999999999999999999998766543221110000 0000000 000000
Q ss_pred cCCCC---------CCCCccCCCCCCcccccc----cc-cc------CCCccc--------------------------c
Q psy5093 270 RGGTD---------HRHMTLHHTPSDDVEMDN----VM-SG------HNGITR--------------------------Q 303 (662)
Q Consensus 270 ~~~~~---------~~~~~~~~~~~~~~~~~~----~~-~~------~~~~~~--------------------------~ 303 (662)
..... .............++.+. .. .. ...... .
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (488)
T 3eml_A 256 TKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAG 335 (488)
T ss_dssp ESSSCHHHHHHHHHHHHTSCCTTBCCHHHHHHHHHHHHHHHHHHHHHCTTHHHHHHHSCHHHHHHHHHHHHHHCHHHHTT
T ss_pred CCCccccccccccccCCCCCCCCCCChhhhccCcccCccccccccCCCCCCCCCcCCcchHHHhhhhccccCCCCCCccC
Confidence 00000 000000000000000000 00 00 000000 0
Q ss_pred c---------------------------cccccccccccccccccccchhhHHhhhhhHHHHHHHHHHHHhhhhhHHHHH
Q psy5093 304 V---------------------------SNTRIIHKGHIVKNFSLSRKLSKFAKEKKAAKTLGIVMGVFIVCWLPFFVVN 356 (662)
Q Consensus 304 ~---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~f~i~~~P~~i~~ 356 (662)
. ...+........++........+.++++|+++++++++++|++||+|+.++.
T Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~~iv~~F~icw~P~~i~~ 415 (488)
T 3eml_A 336 FTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYRSTLQKEVHAAKSLAIIVGLFALCWLPLHIIN 415 (488)
T ss_dssp CHHHHHHHHTTCHHHHHHHHTTSHHHHHCHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcchhhhhccccccccCcccccCcccccchhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH
Confidence 0 0000000000000000112223356899999999999999999999999999
Q ss_pred HHHHhhccccCCCchhHHHHHHHHHHHHhhccccchhhhhcChhHHHHHHHhcccCCccc
Q psy5093 357 LLSAVCTKCFWSEQDEELISAVVTWLGWINSGMNPVIYACWSRDFRSKEKILNHKISPVV 416 (662)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~nP~IY~~~~~~fR~~~~~l~~~~~~~~ 416 (662)
++..+.++. .....++..+..+++++|+++||+||+++|++||++++++++++.++.
T Consensus 416 ~~~~~~~~~---~~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~~~~l~~~~~~~~ 472 (488)
T 3eml_A 416 CFTFFCPDC---SHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHVLRQ 472 (488)
T ss_dssp HHHHHCTTS---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTTSCC
T ss_pred HHHhccCcc---ccccHHHHHHHHHHHHHHhhhchhhhhhcCHHHHHHHHHHHhhccccc
Confidence 998876542 344566778899999999999999999999999999999888766554
No 9
>3v2y_A Sphingosine 1-phosphate receptor 1, lysozyme CHIM; EDG receptor, lipid receptor, multiple sclerosi autoimmunity, structural genomics, PSI-biology; HET: ML5 NAG; 2.80A {Homo sapiens} PDB: 3v2w_A*
Probab=100.00 E-value=5.6e-40 Score=352.94 Aligned_cols=354 Identities=19% Similarity=0.215 Sum_probs=228.3
Q ss_pred HHHHHHHHHHHHHHHHhhHhhhhheeccccccchhhHHHHHHHHHHHhhhhhcccHHHHHhhccccccccccchhHHHHh
Q psy5093 52 TLLVSTLSLFSLVTVFGNALVMIAVVRERYLHTSTNYFIMSLALADCLVGLVVMPFSALYELLDHNWIFGLNWCDSWRSL 131 (662)
Q Consensus 52 ~i~~~~~~ii~i~gl~gN~~vi~~i~~~~~lr~~~~~ll~~Lai~Dll~~l~~~p~~~~~~~~~~~~~~~~~~C~~~~~~ 131 (662)
.+..+++.+++++|++||+++++++.+++++|+++++|++|||++|++.+++.+|..+.. ....|.++...|++..++
T Consensus 64 ~~~~~~~~~i~~~g~~gN~lvi~vi~~~~~lr~~~~~~l~nLA~aDll~~~~~~p~~~~~--~~~~~~~~~~~c~~~~~~ 141 (520)
T 3v2y_A 64 KLTSVVFILICCFIILENIFVLLTIWKTKKFHRPMYYFIGNLALSDLLAGVAYTANLLLS--GATTYKLTPAQWFLREGS 141 (520)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHHHHHHHHHS--GGGGTTSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCccccChHHHHHHHHHHHHHHHHHHHHHHHHHc--cccceeeCccccchHHHH
Confidence 788899999999999999999999999999999999999999999999999888865554 456788899999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhcCCCCCCccccchhhhHHHHHHHHHHHhhhhhHHHhhhccccCCCCCCccccCC--C
Q psy5093 132 DVLFSTASILNLCVISLDRYWAITDPLTYPSRMSTRRAYIWIAIVWICSGGISFPAILWWRAVRNEEVPKNKCPFTD--S 209 (662)
Q Consensus 132 ~~~~~~~s~~~l~~iaidRy~~I~~P~~y~~~~t~~~~~~~i~~~w~~s~~~~~~~~~~~~~~~~~~~~~~~c~~~~--~ 209 (662)
..++..+|++++++||+|||++|+ |++|+..++++++..+++++|++++++++|+++.+..+ .....|...+ .
T Consensus 142 ~~~~~~~S~~~l~~isidRy~aI~-p~~~~~~~t~~~~~~~i~~~W~~s~~~~~~~~~~~~~~----~~~~~C~~~~~~~ 216 (520)
T 3v2y_A 142 MFVALSASVFSLLAIAIERYITML-KMKLHNGSNNFRLFLLISACWVISLILGGLPIMGWNCI----SALSSCSTVLPLY 216 (520)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHC-C-------CCHHHHHHHHHHHHHHHHHHHTTTTTCBCT----TCGGGBCSSSTTB
T ss_pred HHHHHHHHHHHHHHHHHHHhhEEe-ccccccccchhHHHHHHHHHHHHHHHHHHHHHHeeccc----cCCCcccccCCcc
Confidence 999999999999999999999999 99999999999999999999999999999999877654 2334565443 2
Q ss_pred cchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-----cccCCcccccCCCCCCccceeeeccCCCC---------C
Q psy5093 210 KGYLIFSSTISFYLPLLVMVFTYFKIYRAAVVQTKS-----LKVGTKQVMSGSTSGEKELTLRIHRGGTD---------H 275 (662)
Q Consensus 210 ~~~~~~~~~~~~~ip~~ii~~~y~~I~~~l~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~ 275 (662)
..+..+..++.+++|+++++++|.+|++.++++... .+..+........................ .
T Consensus 217 ~~~~~~~~~~~~~lPl~ii~~~Y~~I~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~t~~~g~~~~~~~~~~~~~~~~~~ 296 (520)
T 3v2y_A 217 HKHYILFCTTVFTLLLLSIVILYCRIYSLVRTRNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDK 296 (520)
T ss_dssp BHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCSSCEECSSSSEEETTTEECCSSSCHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhhhhhhhccccccceeEecccccccccccccccchhhh
Confidence 334444556679999999999999999999987611 11110000000000000000000000000 0
Q ss_pred CCCccCCCCCCcccccc-----cc-----ccCCCcc--------------------------ccccc--------c----
Q psy5093 276 RHMTLHHTPSDDVEMDN-----VM-----SGHNGIT--------------------------RQVSN--------T---- 307 (662)
Q Consensus 276 ~~~~~~~~~~~~~~~~~-----~~-----~~~~~~~--------------------------~~~~~--------~---- 307 (662)
.............+.+. .. ....... ..... .
T Consensus 297 ~~g~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 376 (520)
T 3v2y_A 297 AIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDE 376 (520)
T ss_dssp HHTSCCTTCCCHHHHHHHHHHHHHHHHHHHTTCTTTHHHHHHSCHHHHHHHHHHHHHSCHHHHHTCHHHHHHHHTTCHHH
T ss_pred HHHHhcCCcccHHHhhhHHHhccccccccccccccCCCcCCccchhhhHHHHHHHHccCCCcccccccccccccccchhh
Confidence 00000000000000000 00 0000000 00000 0
Q ss_pred ----------------ccccccccccccccccchhhHHhhhhhHHHHHHHHHHHHhhhhhHHHHHHHHHhhccccCCCch
Q psy5093 308 ----------------RIIHKGHIVKNFSLSRKLSKFAKEKKAAKTLGIVMGVFIVCWLPFFVVNLLSAVCTKCFWSEQD 371 (662)
Q Consensus 308 ----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~f~i~~~P~~i~~~~~~~~~~~~~~~~~ 371 (662)
+........+.........+.++++|+++++++++++|++||+|+.++.++..+.+... ..
T Consensus 377 ~~~~~~~s~~~~~~~~r~~r~~~~~~~~~~~~~~~~~~~~~k~~~~~~~vv~~F~vcw~P~~i~~~~~~~~~~~~---~~ 453 (520)
T 3v2y_A 377 AAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYASRSSENVALLKTVIIVLSVFIACWAPLFILLLLDVGCKVKT---CD 453 (520)
T ss_dssp HHHHHHHSHHHHHSHHHHHHHHHHHHHCSGGGTCSSTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCTTT---CS
T ss_pred HhhhhhccchhhhcccchhhHHHHhhcchhhhHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccc---cc
Confidence 00000000000000111122336899999999999999999999999999887654311 12
Q ss_pred hHHHHHHHHHHHHhhccccchhhhhcChhHHHHHHHhcccCCcc
Q psy5093 372 EELISAVVTWLGWINSGMNPVIYACWSRDFRSKEKILNHKISPV 415 (662)
Q Consensus 372 ~~~~~~~~~~l~~~ns~~nP~IY~~~~~~fR~~~~~l~~~~~~~ 415 (662)
......+..+++++|+++||+||+++|++||++++++++++...
T Consensus 454 ~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fr~~~~~~~~~~~~~ 497 (520)
T 3v2y_A 454 ILFRAEYFLVLAVLNSGTNPIIYTLTNKEMRRAFIRIMGRPLEV 497 (520)
T ss_dssp TTTSCHHHHHHHHHGGGTHHHHHHHHCHHHHHHHHTTCCSCC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHhccc
Confidence 33344567789999999999999999999999999998876544
No 10
>4dkl_A MU-type opioid receptor, lysozyme chimera; G-protein coupled receptor, 7 transmembrane receptor, signal protein-antagonist complex; HET: BF0 CLR MPG 1PE; 2.80A {Mus musculus} PDB: 4ej4_A* 4djh_A*
Probab=100.00 E-value=8.7e-41 Score=355.71 Aligned_cols=361 Identities=23% Similarity=0.315 Sum_probs=240.0
Q ss_pred HhHHHHHHHHHHHHHHHHHHhhHhhhhheeccccccchhhHHHHHHHHHHHhhhhhcccHHHHHhhccccccccccchhH
Q psy5093 48 AQQRTLLVSTLSLFSLVTVFGNALVMIAVVRERYLHTSTNYFIMSLALADCLVGLVVMPFSALYELLDHNWIFGLNWCDS 127 (662)
Q Consensus 48 ~~~~~i~~~~~~ii~i~gl~gN~~vi~~i~~~~~lr~~~~~ll~~Lai~Dll~~l~~~p~~~~~~~~~~~~~~~~~~C~~ 127 (662)
....+++.+++.+++++|++||+++++++.+++++|++.++|++|||++|++.++. +|+.+.... .+.|.++...|++
T Consensus 14 ~~~~~~~~~~~~~~~~~gi~gN~lvi~~~~~~~~~~~~~~~~l~~La~~Dll~~~~-~p~~~~~~~-~~~~~~~~~~C~~ 91 (464)
T 4dkl_A 14 MVTAITIMALYSIVCVVGLFGNFLVMYVIVRYTKMKTATNIYIFNLALADALATST-LPFQSVNYL-MGTWPFGNILCKI 91 (464)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHH-HHHHHHHHH-HSSCCSCSHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHeehhhhhccccCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHH-hCCcccccchhhh
Confidence 34578889999999999999999999999999999999999999999999999776 887666554 4689999999999
Q ss_pred HHHhhHHHHHHHHHHHHHHHHHHhhhhcCCCCCCccccchhhhHHHHHHHHHHHhhhhhHHHhhhccccCCCCCCccccC
Q psy5093 128 WRSLDVLFSTASILNLCVISLDRYWAITDPLTYPSRMSTRRAYIWIAIVWICSGGISFPAILWWRAVRNEEVPKNKCPFT 207 (662)
Q Consensus 128 ~~~~~~~~~~~s~~~l~~iaidRy~~I~~P~~y~~~~t~~~~~~~i~~~w~~s~~~~~~~~~~~~~~~~~~~~~~~c~~~ 207 (662)
..++..++..+|.+++++||+|||++|++|++|++.++++++..+++++|++++++++|.++........ ....|...
T Consensus 92 ~~~~~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~~~~~W~~~~~~~~p~~~~~~~~~~~--~~~~c~~~ 169 (464)
T 4dkl_A 92 VISIDYYNMFTSIFTLCTMSVDRYIAVCHPVKALDFRTPRNAKIVNVCNWILSSAIGLPVMFMATTKYRQ--GSIDCTLT 169 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHSBCCEEET--TEEECCBC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccHhHHhHHHHHHHHHHHHHHHHHheeecccC--CCceEEee
Confidence 9999999999999999999999999999999999999999999999999999999999988755433322 22334333
Q ss_pred CC-------cchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCcccccCCC---CCCccceeeeccCCCCCCC
Q psy5093 208 DS-------KGYLIFSSTISFYLPLLVMVFTYFKIYRAAVVQTKSLKVGTKQVMSGST---SGEKELTLRIHRGGTDHRH 277 (662)
Q Consensus 208 ~~-------~~~~~~~~~~~~~ip~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 277 (662)
.. ..|.++..++.+++|+++++++|+.|++.+++++++.+........... ...............+...
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~p~~ii~~~y~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (464)
T 4dkl_A 170 FSHPTWYWENLLKICVFIFAFIMPVLIITVCYGLMILRLKSVRNIFEMLRIDEGLRLKIYKNTEGYYTIGIGHLLTKSPS 249 (464)
T ss_dssp CSSSHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHCCCCCSHHHHHHHHHCCEEEEEECTTSCEEEETTEEEESSSC
T ss_pred cCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhhccccccccccccCCCCCccccccccccCCCc
Confidence 22 2245566677789999999999999999988765533322111000000 0000000000000000000
Q ss_pred C------------ccCCCCCCcccccccc-----------ccCCCcc---------ccc---------------------
Q psy5093 278 M------------TLHHTPSDDVEMDNVM-----------SGHNGIT---------RQV--------------------- 304 (662)
Q Consensus 278 ~------------~~~~~~~~~~~~~~~~-----------~~~~~~~---------~~~--------------------- 304 (662)
. .........++.+... ....+.. +..
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (464)
T 4dkl_A 250 LNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSL 329 (464)
T ss_dssp SHHHHHHHHHHHSSCCTTBCCHHHHHHHHHHHHHHHHHHHHTCTTHHHHHHTSCHHHHHHHHHHHHHHCHHHHHTCHHHH
T ss_pred cccccccccccccccccceecCCccccccccCCcccccccccCCCCCccccCcccccchhhhhccccCCCCCcccccccc
Confidence 0 0000000000000000 0000000 000
Q ss_pred ---ccccc------cc-------------ccccccccccccchhhHHhhhhhHHHHHHHHHHHHhhhhhHHHHHHHHHhh
Q psy5093 305 ---SNTRI------IH-------------KGHIVKNFSLSRKLSKFAKEKKAAKTLGIVMGVFIVCWLPFFVVNLLSAVC 362 (662)
Q Consensus 305 ---~~~~~------~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~f~i~~~P~~i~~~~~~~~ 362 (662)
...+. .. ..............++.++++|+++++++++++|++||+|+.++.++..+.
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~k~l~~v~~~F~icw~P~~i~~l~~~~~ 409 (464)
T 4dkl_A 330 RMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYEKDRNLRRITRMVLVVVAVFIVCWTPIHIYVIIKALI 409 (464)
T ss_dssp HHHHTTCHHHHHHHHTTSHHHHHSHHHHHHHHHHHHHSSSTTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred cchhhcccchhhcccccccccccCccccceeeecccccccchhHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHh
Confidence 00000 00 000000000111223346789999999999999999999999999988764
Q ss_pred ccccCCCchhHHHHHHHHHHHHhhccccchhhhhcChhHHHHHHHhcccCCc
Q psy5093 363 TKCFWSEQDEELISAVVTWLGWINSGMNPVIYACWSRDFRSKEKILNHKISP 414 (662)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~l~~~ns~~nP~IY~~~~~~fR~~~~~l~~~~~~ 414 (662)
... .......+..+..+|.++|+++||+||+++|++||++++++||++..
T Consensus 410 ~~~--~~~~~~~~~~~~~~L~~~ns~~NPiIY~~~~~~fR~~~~~lc~~~~~ 459 (464)
T 4dkl_A 410 TIP--ETTFQTVSWHFCIALGYTNSCLNPVLYAFLDENFKRCFREFCIPTSS 459 (464)
T ss_dssp CCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHC----
T ss_pred cCC--ccccchhHHHHHHHHHHhhhchhHHHHHHhhHHHHHHHHHHhccccc
Confidence 321 23445566778889999999999999999999999999999877654
No 11
>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A
Probab=100.00 E-value=9.6e-38 Score=320.89 Aligned_cols=286 Identities=23% Similarity=0.429 Sum_probs=227.0
Q ss_pred HHHHHHHHHHHHHHHHHhhHhhhhheeccccccchhhHHHHHHHHHHHhhhhhcccHHHHHhhccccccccccchhHHHH
Q psy5093 51 RTLLVSTLSLFSLVTVFGNALVMIAVVRERYLHTSTNYFIMSLALADCLVGLVVMPFSALYELLDHNWIFGLNWCDSWRS 130 (662)
Q Consensus 51 ~~i~~~~~~ii~i~gl~gN~~vi~~i~~~~~lr~~~~~ll~~Lai~Dll~~l~~~p~~~~~~~~~~~~~~~~~~C~~~~~ 130 (662)
..+..+++.+++++|++||+++++++.++|++|++.+++++|||++|++.+++.+|+.+.... .+.|.+++..|++..+
T Consensus 32 ~~~~~~~~~~i~~~gi~gN~lvi~vi~~~~~l~~~~~~~l~~LaiaDll~~~~~~p~~~~~~~-~~~~~~~~~~C~~~~~ 110 (364)
T 2ks9_A 32 IVLWAAAYTVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFAEASMAAFNTVVNFTYAV-HNEWYYGLFYCKFHNF 110 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCCHHHHHHHHHHHHHHHHHHTHHHHHHHHHH-HTSCSSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCccchHHHHHhHHH
Confidence 455688899999999999999999999999999999999999999999998888887665544 5679999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhhcCCCCCCccccchhhhHHHHHHHHHHHhhhhhHHHhhhccccCCCCCCccccCCC-
Q psy5093 131 LDVLFSTASILNLCVISLDRYWAITDPLTYPSRMSTRRAYIWIAIVWICSGGISFPAILWWRAVRNEEVPKNKCPFTDS- 209 (662)
Q Consensus 131 ~~~~~~~~s~~~l~~iaidRy~~I~~P~~y~~~~t~~~~~~~i~~~w~~s~~~~~~~~~~~~~~~~~~~~~~~c~~~~~- 209 (662)
+..++..+|.+++++||+|||++|++|++|+ .+++++..+++++|+++++.++|..+..... . ......|...+.
T Consensus 111 ~~~~~~~~s~~~l~~isidRy~aI~~P~~~~--~~~~~~~~~i~~~W~~s~~~~~p~~~~~~~~-~-~~~~~~C~~~~~~ 186 (364)
T 2ks9_A 111 FPIAAVFASIYSMTAVAFDRYMAIIHPLQPR--LSATATKVVICVIWVLALLLAFPQGYYSTTE-T-MPSRVVCMIEWPE 186 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCCCTTS--CCHHHHHHHHHHHHHHHHHHHTTTTTTSCCC-B-CTTCSSBCCCCSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcccc--cccchHHHHHHHHHHHHHHHHhHHHHHhhhe-e-cCCCCEEeecCCC
Confidence 9999999999999999999999999999875 6888999999999999999999876543222 1 223344543221
Q ss_pred -------cchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCcccccCCCCCCccceeeeccCCCCCCCCccCC
Q psy5093 210 -------KGYLIFSSTISFYLPLLVMVFTYFKIYRAAVVQTKSLKVGTKQVMSGSTSGEKELTLRIHRGGTDHRHMTLHH 282 (662)
Q Consensus 210 -------~~~~~~~~~~~~~ip~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (662)
..|.....++.+++|+++++++|.+|.+.++++++..+.
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~lp~~ii~~~y~~i~~~l~~~~~~~~~---------------------------------- 232 (364)
T 2ks9_A 187 HPNKIYEKVYHICVTVLIYFLPLLVIGYAYTVVGITLWASEIPGDS---------------------------------- 232 (364)
T ss_dssp CCTTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSCSCCCSSSS----------------------------------
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc----------------------------------
Confidence 134555667788999999999999999877542211000
Q ss_pred CCCCccccccccccCCCccccccccccccccccccccccccchhhHHhhhhhHHHHHHHHHHHHhhhhhHHHHHHHHHhh
Q psy5093 283 TPSDDVEMDNVMSGHNGITRQVSNTRIIHKGHIVKNFSLSRKLSKFAKEKKAAKTLGIVMGVFIVCWLPFFVVNLLSAVC 362 (662)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~f~i~~~P~~i~~~~~~~~ 362 (662)
..+.+++.++++|+++++++++++|++||+|+.+..++....
T Consensus 233 --------------------------------------~~~~~~~~~~~~k~~~~~~~v~~~f~~~~~P~~i~~~~~~~~ 274 (364)
T 2ks9_A 233 --------------------------------------SDRYHEQVSAKRKVVKMMIVVVCTFAICWLPFHIFFLLPYIN 274 (364)
T ss_dssp --------------------------------------SSCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred --------------------------------------chhhhhhHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 000112234788999999999999999999999998887765
Q ss_pred ccccCCCchhHHHHHHHHHHHHhhccccchhhhhcChhHHHHHHHhcccCCc
Q psy5093 363 TKCFWSEQDEELISAVVTWLGWINSGMNPVIYACWSRDFRSKEKILNHKISP 414 (662)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~l~~~ns~~nP~IY~~~~~~fR~~~~~l~~~~~~ 414 (662)
++.. .......+..+..++.++|+++||+||++++++||+++++++++++.
T Consensus 275 ~~~~-~~~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fR~~~~~~~~~~~~ 325 (364)
T 2ks9_A 275 PDLY-LKKFIQQVYLAIMWLAMSSTMYNPIIYCCLNDRFRLGFKHAFRCCPF 325 (364)
T ss_dssp TTSC-SSSCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHSSSCC
T ss_pred cccc-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcCC
Confidence 4322 12223456677888999999999999999999999999999876543
No 12
>2lnl_A C-X-C chemokine receptor type 1; G protein coupled receptor, GPCR, membrane protei transmembrane, 7TM, phospholipid, signaling, signaling PROT; NMR {Homo sapiens}
Probab=100.00 E-value=6.2e-38 Score=312.22 Aligned_cols=273 Identities=26% Similarity=0.401 Sum_probs=219.6
Q ss_pred HHHHHHHHHHHHHHHHHhhHhhhhheeccccccchhhHHHHHHHHHHHhhhhhcccHHHHHhhccccccccccchhHHHH
Q psy5093 51 RTLLVSTLSLFSLVTVFGNALVMIAVVRERYLHTSTNYFIMSLALADCLVGLVVMPFSALYELLDHNWIFGLNWCDSWRS 130 (662)
Q Consensus 51 ~~i~~~~~~ii~i~gl~gN~~vi~~i~~~~~lr~~~~~ll~~Lai~Dll~~l~~~p~~~~~~~~~~~~~~~~~~C~~~~~ 130 (662)
+.+..+++.+++++|++||+++++++.++|++|+++|+|++|||++|++.++ .+|+.+.... .+|..|+..|+...+
T Consensus 11 ~~i~~i~y~ii~i~gv~gN~lvi~vi~~~~~lrt~~n~~i~nLAvaDll~~l-~~p~~~~~~~--~~~~~~~~~c~~~~~ 87 (296)
T 2lnl_A 11 KYVVIIAYALVFLLSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFAL-TLPIWAASKV--NGWIFGTFLCKVVSL 87 (296)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCSTTHHHHHHHHHHHHHHHH-HHHHHHHHHH--SSSCCSSHHHHHHHH
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHccCCCChHHHHHHHHHHHHHHHHH-hhhHHHhhcc--CCCccchhHHHHHhh
Confidence 5677889999999999999999999999999999999999999999999865 4675555443 469999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhhcCCCCCCccccchhhhHHHHHHHHHHHhhhhhHHHhhhccccCCCCCCcccc----
Q psy5093 131 LDVLFSTASILNLCVISLDRYWAITDPLTYPSRMSTRRAYIWIAIVWICSGGISFPAILWWRAVRNEEVPKNKCPF---- 206 (662)
Q Consensus 131 ~~~~~~~~s~~~l~~iaidRy~~I~~P~~y~~~~t~~~~~~~i~~~w~~s~~~~~~~~~~~~~~~~~~~~~~~c~~---- 206 (662)
+..++..+|.+++++||+|||++|++|++|+... ++++..+++++|+++++.++|+...+............+..
T Consensus 88 ~~~~~~~~s~~~l~~isidRy~aI~~P~~~~~~~-~~~~~~~~~~~W~~s~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 166 (296)
T 2lnl_A 88 LKEVNFYSGILLLACISVDRYLAIVHATRTLTQK-RHLVKFVCLGCWGLSMNLSLPFFLFRQAYHPNNSSPVCYEVLGND 166 (296)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSSSCSSSSCCH-HHHHHHHHHHHHHHHHHHHHHHHHTSSCCCCCTTSCCCCSCCSCC
T ss_pred hhhhhHHHHHHHHHHHHhhhhhhhhhccccchhh-hhhhHheehHHHHHHHHHhcchhhcceeecCCCCCceeeeecccc
Confidence 9999999999999999999999999999987654 45667788889999999999998877665443332222211
Q ss_pred --CCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCcccccCCCCCCccceeeeccCCCCCCCCccCCCC
Q psy5093 207 --TDSKGYLIFSSTISFYLPLLVMVFTYFKIYRAAVVQTKSLKVGTKQVMSGSTSGEKELTLRIHRGGTDHRHMTLHHTP 284 (662)
Q Consensus 207 --~~~~~~~~~~~~~~~~ip~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (662)
.....+......+.+++|+.++..+|..+.+.++++.+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~p~~i~~~~y~~i~~~~~~~~~---------------------------------------- 206 (296)
T 2lnl_A 167 TAKWRMVLRILPHTFGFIVPLFVMLFCYGFTLRTLFKAHM---------------------------------------- 206 (296)
T ss_dssp TTTTTTHHHHTTTHHHHHHHHHHHHHHHHHHTTTSSSCCC----------------------------------------
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh----------------------------------------
Confidence 12233556667788899999999999887654322110
Q ss_pred CCccccccccccCCCccccccccccccccccccccccccchhhHHhhhhhHHHHHHHHHHHHhhhhhHHHHHHHHHhhcc
Q psy5093 285 SDDVEMDNVMSGHNGITRQVSNTRIIHKGHIVKNFSLSRKLSKFAKEKKAAKTLGIVMGVFIVCWLPFFVVNLLSAVCTK 364 (662)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~f~i~~~P~~i~~~~~~~~~~ 364 (662)
++++|++|++.+++++|++||+|+.+..++......
T Consensus 207 --------------------------------------------~~~~k~~~~~~~v~~~f~icw~P~~i~~~~~~~~~~ 242 (296)
T 2lnl_A 207 --------------------------------------------GQKHRAMRVIFAVVLIFLLCWLPYNLVLLADTLMRT 242 (296)
T ss_dssp --------------------------------------------HHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCS
T ss_pred --------------------------------------------hhhhhHHHHHHHhhhheeeeehHHHHHHHHHHHhcc
Confidence 167789999999999999999999999998877543
Q ss_pred ccCCCc-----hhHHHHHHHHHHHHhhccccchhhhhcChhHHHHHHHhccc
Q psy5093 365 CFWSEQ-----DEELISAVVTWLGWINSGMNPVIYACWSRDFRSKEKILNHK 411 (662)
Q Consensus 365 ~~~~~~-----~~~~~~~~~~~l~~~ns~~nP~IY~~~~~~fR~~~~~l~~~ 411 (662)
...... .......++.+++++|+++||+||+++|++||+++|+++|+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~~~~ll~c 294 (296)
T 2lnl_A 243 QVIQESCERRNNIGRALDATEILGFLHSCLNPIIYAFIGQNFRHGFLKILAM 294 (296)
T ss_dssp SSCSCHHHHHHHTTHHHHHHHHHGGGGGTHHHHHHHHHCSHHHHHHHHHHHH
T ss_pred ccCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHhcC
Confidence 322211 12345667888999999999999999999999999998865
No 13
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*
Probab=100.00 E-value=1.3e-37 Score=329.16 Aligned_cols=293 Identities=25% Similarity=0.406 Sum_probs=236.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhHhhhhheeccccccchhhHHHHHHHHHHHhhhhhc-ccHHHHHhhccccccccccchhHH
Q psy5093 50 QRTLLVSTLSLFSLVTVFGNALVMIAVVRERYLHTSTNYFIMSLALADCLVGLVV-MPFSALYELLDHNWIFGLNWCDSW 128 (662)
Q Consensus 50 ~~~i~~~~~~ii~i~gl~gN~~vi~~i~~~~~lr~~~~~ll~~Lai~Dll~~l~~-~p~~~~~~~~~~~~~~~~~~C~~~ 128 (662)
...++.+++.+++++|++||+++++++.++|++|++.+++++|||++|++.+++. +|+.+.... .+.|.++...|++.
T Consensus 33 ~~~~~~i~~~ii~i~gi~gN~lvi~vi~~~~~~~~~~~~ll~~LaiaDll~~~~~~~p~~~~~~~-~~~~~~~~~~C~~~ 111 (448)
T 2z73_A 33 VYYSLGIFIGICGIIGCGGNGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNGFPLMTISCF-LKKWIFGFAACKVY 111 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSTTHHHHHHHHHHHHHHHHHHSTTHHHHHHH-TTSCCSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhHHHhhhhhhhccccCCccchHHHHHHHHHHHHHHHHhccHHHHHHh-cCCccCCHHHHHHH
Confidence 4567888999999999999999999999999999999999999999999998764 786665544 56899999999999
Q ss_pred HHhhHHHHHHHHHHHHHHHHHHhhhhcCCCCCCccccchhhhHHHHHHHHHHHhhhhhHHHhhhccccCCCCCCccccCC
Q psy5093 129 RSLDVLFSTASILNLCVISLDRYWAITDPLTYPSRMSTRRAYIWIAIVWICSGGISFPAILWWRAVRNEEVPKNKCPFTD 208 (662)
Q Consensus 129 ~~~~~~~~~~s~~~l~~iaidRy~~I~~P~~y~~~~t~~~~~~~i~~~w~~s~~~~~~~~~~~~~~~~~~~~~~~c~~~~ 208 (662)
.++..++..+|.+++++||+|||++|++|++|++.++++++..+++++|+++++++++.++.+.....+. ....|...+
T Consensus 112 ~~~~~~~~~~S~~~l~~isidRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~s~~~~~~~~~~~~~~~~~~-~~~~c~~~~ 190 (448)
T 2z73_A 112 GFIGGIFGFMSIMTMAMISIDRYNVIGRPMAASKKMSHRRAFIMIIFVWLWSVLWAIGPIFGWGAYTLEG-VLCNCSFDY 190 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTCCCCCHHHHHHHHHHHHHHHHHHHSGGGGTSSCEEECT-TSSSEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccccccccceechhHHHHHHHHHHHHHHHHHHHHHhceeeeeecC-CceeEeccc
Confidence 9999999999999999999999999999999999999999999999999999999999888765543332 344564332
Q ss_pred C------cchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCcccccCCCCCCccceeeeccCCCCCCCCccCC
Q psy5093 209 S------KGYLIFSSTISFYLPLLVMVFTYFKIYRAAVVQTKSLKVGTKQVMSGSTSGEKELTLRIHRGGTDHRHMTLHH 282 (662)
Q Consensus 209 ~------~~~~~~~~~~~~~ip~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (662)
. ..+.....++.+++|+++++++|.+|++.++++.++.+...+...
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~lP~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~---------------------------- 242 (448)
T 2z73_A 191 ISRDSTTRSNILCMFILGFFGPILIIFFCYFNIVMSVSNHEKEMAAMAKRLN---------------------------- 242 (448)
T ss_dssp SCCSHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTTHHHHHHHHHHHHTTTC----------------------------
T ss_pred ccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh----------------------------
Confidence 1 123444556678999999999999999999988776542111000
Q ss_pred CCCCccccccccccCCCccccccccccccccccccccccccchhhHHhhhhhHHHHHHHHHHHHhhhhhHHHHHHHHHhh
Q psy5093 283 TPSDDVEMDNVMSGHNGITRQVSNTRIIHKGHIVKNFSLSRKLSKFAKEKKAAKTLGIVMGVFIVCWLPFFVVNLLSAVC 362 (662)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~f~i~~~P~~i~~~~~~~~ 362 (662)
....++.....++++|+++++++++++|++||+|+.++.++..+.
T Consensus 243 -----------------------------------~~~~~~~~~~~~~~~k~~~~l~~iv~~F~i~~~P~~i~~~~~~~~ 287 (448)
T 2z73_A 243 -----------------------------------AKELRKAQAGANAEMRLAKISIVIVSQFLLSWSPYAVVALLAQFG 287 (448)
T ss_dssp -----------------------------------CTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred -----------------------------------hHHHHhhhccccHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhC
Confidence 000111122344788999999999999999999999998887764
Q ss_pred ccccCCCchhHHHHHHHHHHHHhhccccchhhhhcChhHHHHHHHhccc
Q psy5093 363 TKCFWSEQDEELISAVVTWLGWINSGMNPVIYACWSRDFRSKEKILNHK 411 (662)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~l~~~ns~~nP~IY~~~~~~fR~~~~~l~~~ 411 (662)
... ........+..++.++|+++||+||+++|++||+++++++++
T Consensus 288 ~~~----~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~~~~~~~~ 332 (448)
T 2z73_A 288 PLE----WVTPYAAQLPVMFAKASAIHNPMIYSVSHPKFREAISQTFPW 332 (448)
T ss_dssp CGG----GCCHHHHHHHHHHHHHGGGSHHHHHHHHCHHHHHHHHHHCGG
T ss_pred Ccc----cCChHHHHHHHHHHHHHHhhcchHHHHhhHHHHHHHHHHHHH
Confidence 321 223456677888999999999999999999999999998864
No 14
>4ea3_A Fusion protein of nociceptin receptor and cytochr; PSI-biology GPCR network, structural genomics, GPCR membrane 7TM NOP ORL1 cytochrome B562; HET: 0NN OLB OLA OLC; 3.01A {Homo sapiens}
Probab=100.00 E-value=1e-37 Score=328.17 Aligned_cols=292 Identities=24% Similarity=0.344 Sum_probs=221.7
Q ss_pred hhHhHHhHHHHHHHHHHHHHHHHHHhhHhhhhheeccccccchhhHHHHHHHHHHHhhhhhcccHHHHHhhccccccccc
Q psy5093 43 RWLELAQQRTLLVSTLSLFSLVTVFGNALVMIAVVRERYLHTSTNYFIMSLALADCLVGLVVMPFSALYELLDHNWIFGL 122 (662)
Q Consensus 43 ~~~~~~~~~~i~~~~~~ii~i~gl~gN~~vi~~i~~~~~lr~~~~~ll~~Lai~Dll~~l~~~p~~~~~~~~~~~~~~~~ 122 (662)
+.......+.+..+++.+++++|++||+++++++.+++++|++.++|++|||++|++. ++.+|+.+.... .+.|.++.
T Consensus 117 ~~~~~~~~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~l~~~~~~ll~~LAvsDll~-~~~~p~~~~~~~-~~~~~~~~ 194 (434)
T 4ea3_A 117 GAFLPLGLKVTIVGLYLAVCVGGLLGNCLVMYVILRHTKMKTATNIYIFNLALADTLV-LLTLPFQGTDIL-LGFWPFGN 194 (434)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHHHH-HTTHHHHHHHHH-HTSCTTHH
T ss_pred cccCChhHHHHHHHHHHHHHHHHHHHHHHeeeeeeecCccCchhHHHHHHHHHHHHHH-HHHhHHHHHHHH-hcCCcCcc
Confidence 3444666788899999999999999999999999999999999999999999999998 666886666554 45699999
Q ss_pred cchhHHHHhhHHHHHHHHHHHHHHHHHHhhhhcCCCCCCccccchhhhHHHHHHHHHHHhhhhhHHHhhhccccCCCCCC
Q psy5093 123 NWCDSWRSLDVLFSTASILNLCVISLDRYWAITDPLTYPSRMSTRRAYIWIAIVWICSGGISFPAILWWRAVRNEEVPKN 202 (662)
Q Consensus 123 ~~C~~~~~~~~~~~~~s~~~l~~iaidRy~~I~~P~~y~~~~t~~~~~~~i~~~w~~s~~~~~~~~~~~~~~~~~~~~~~ 202 (662)
..|++..++..++..+|.+++++||+|||++|++|++|++.++++++..+++++|++++++++|..+........ ...
T Consensus 195 ~~C~~~~~~~~~~~~~S~~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~--~~~ 272 (434)
T 4ea3_A 195 ALCKTVIAIDYYNMFTSTFTLTAMSVDRYVAICHPIRALDVRTSSKAQAVNVAIWALASVVGVPVAIMGSAQVED--EEI 272 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-------CHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCS--SCC
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhEEEcccccccccchhhhHHhhhhhhhHHHHHHhhHheeeeeEeec--Cce
Confidence 999999999999999999999999999999999999999999999999999999999999999888764433222 233
Q ss_pred ccccCCC-------cchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCcccccCCCCCCccceeeeccCCCCC
Q psy5093 203 KCPFTDS-------KGYLIFSSTISFYLPLLVMVFTYFKIYRAAVVQTKSLKVGTKQVMSGSTSGEKELTLRIHRGGTDH 275 (662)
Q Consensus 203 ~c~~~~~-------~~~~~~~~~~~~~ip~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (662)
.|..... ..+.....++.+++|+++++++|.+|++.+++++++.
T Consensus 273 ~c~~~~~~~~~~~~~~~~~~~~~~~~~ip~~ii~~~y~~I~~~l~~~~~~~----------------------------- 323 (434)
T 4ea3_A 273 ECLVEIPTPQDYWGPVFAICIFLFSFIVPVLVISVCYSLMIRRLRGVRLLS----------------------------- 323 (434)
T ss_dssp CEEECCCSSHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTTCSSCS-----------------------------
T ss_pred eEEEecCChHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc-----------------------------
Confidence 4533322 2245566777889999999999999998886533210
Q ss_pred CCCccCCCCCCccccccccccCCCccccccccccccccccccccccccchhhHHhhhhhHHHHHHHHHHHHhhhhhHHHH
Q psy5093 276 RHMTLHHTPSDDVEMDNVMSGHNGITRQVSNTRIIHKGHIVKNFSLSRKLSKFAKEKKAAKTLGIVMGVFIVCWLPFFVV 355 (662)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~f~i~~~P~~i~ 355 (662)
...++.++++|+++++++++++|++||+|+.+.
T Consensus 324 -----------------------------------------------~~~~~~~~~~~~~~~~~~vv~~F~i~w~P~~i~ 356 (434)
T 4ea3_A 324 -----------------------------------------------GSREKDRNLRRITRLVLVVVAVFVGCWTPVQVF 356 (434)
T ss_dssp -----------------------------------------------SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------------------cchhhHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 011123478899999999999999999999999
Q ss_pred HHHHHhhccccCCCchhHHHHHHHHHHHHhhccccchhhhhcChhHHHHHHHhcccCCccc
Q psy5093 356 NLLSAVCTKCFWSEQDEELISAVVTWLGWINSGMNPVIYACWSRDFRSKEKILNHKISPVV 416 (662)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~nP~IY~~~~~~fR~~~~~l~~~~~~~~ 416 (662)
.++..+.... .......+..+..++.++|+++||+||+++|++||++++++||+++...
T Consensus 357 ~~~~~~~~~~--~~~~~~~~~~~~~~l~~~ns~lNPiIY~~~~~~fR~~~~~~~~~~~~~~ 415 (434)
T 4ea3_A 357 VLAQGLGVQP--SSETAVAILRFCTALGYVNSCLNPILYAFLDENFKACFRKFCCASALGR 415 (434)
T ss_dssp HHHHHTTCCC--CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHC----------
T ss_pred HHHHHhccCC--chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCC
Confidence 8887654321 2233345666777899999999999999999999999999887765443
No 15
>1u19_A Rhodopsin; G protein-coupled receptor, membrane protein, retinal protei photoreceptor, signaling protein; HET: MAN NAG BMA RET PLM HTO HTG; 2.20A {Bos taurus} SCOP: f.13.1.2 PDB: 1hzx_A* 1gzm_A* 1l9h_A* 2g87_A* 2hpy_A* 2i35_A* 2i36_A* 2i37_A* 2ped_A* 3oax_A* 3c9l_A* 1jfp_A* 1ln6_A* 1f88_A* 3cap_A* 3dqb_A* 3pqr_A* 3pxo_A* 3c9m_A* 2x72_A* ...
Probab=100.00 E-value=2.8e-38 Score=322.95 Aligned_cols=285 Identities=19% Similarity=0.336 Sum_probs=230.7
Q ss_pred HHhHHHHHHHHHHHHHHHHHHhhHhhhhheeccccccchhhHHHHHHHHHHHhhhhhcccHHHHHhhccccccccccchh
Q psy5093 47 LAQQRTLLVSTLSLFSLVTVFGNALVMIAVVRERYLHTSTNYFIMSLALADCLVGLVVMPFSALYELLDHNWIFGLNWCD 126 (662)
Q Consensus 47 ~~~~~~i~~~~~~ii~i~gl~gN~~vi~~i~~~~~lr~~~~~ll~~Lai~Dll~~l~~~p~~~~~~~~~~~~~~~~~~C~ 126 (662)
.+....+..+++.+++++|++||+++++++.+++++|++.+++++|||++|++.+++.+|..+... ..+.|.+++..|+
T Consensus 34 ~~~~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~~~~~~~~ll~~Lai~Dll~~~~~~~~~~~~~-~~~~~~~~~~~C~ 112 (349)
T 1u19_A 34 EPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTS-LHGYFVFGPTGCN 112 (349)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHHHHHHHHTHHHHHHHH-HHTSCTTHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHhHHheEeehhhhhhhcCchhHHHHHHHHHHHHHHHhcchHHHHHH-hcCeeeCChhHHH
Confidence 344567788899999999999999999999999999999999999999999999988888665544 3567999999999
Q ss_pred HHHHhhHHHHHHHHHHHHHHHHHHhhhhcCCCCCCccccchhhhHHHHHHHHHHHhhhhhHHHhhhccccCCCCCCcccc
Q psy5093 127 SWRSLDVLFSTASILNLCVISLDRYWAITDPLTYPSRMSTRRAYIWIAIVWICSGGISFPAILWWRAVRNEEVPKNKCPF 206 (662)
Q Consensus 127 ~~~~~~~~~~~~s~~~l~~iaidRy~~I~~P~~y~~~~t~~~~~~~i~~~w~~s~~~~~~~~~~~~~~~~~~~~~~~c~~ 206 (662)
+..++..++..+|.+++++||+|||++|++|++|++ ++++++...++++|+++++.++|+++.+..+..+. ....|..
T Consensus 113 ~~~~~~~~~~~~s~~~l~~isidRy~aI~~P~~~~~-~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~C~~ 190 (349)
T 1u19_A 113 LEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFR-FGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEG-MQCSCGI 190 (349)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSSSCC-CCHHHHHHHHHHHHHHHHHHHSGGGTTSSCCEEET-TTTEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHheeeCCcccee-eccchhHHHHHHHHHHHHHHHHHHHHheeeeeccC-Cceeecc
Confidence 999999999999999999999999999999999876 79999999999999999999999988765443222 3345643
Q ss_pred CC--------CcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCcccccCCCCCCccceeeeccCCCCCCCC
Q psy5093 207 TD--------SKGYLIFSSTISFYLPLLVMVFTYFKIYRAAVVQTKSLKVGTKQVMSGSTSGEKELTLRIHRGGTDHRHM 278 (662)
Q Consensus 207 ~~--------~~~~~~~~~~~~~~ip~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (662)
.. ...|.....++.+++|+++++++|.+|++.++++.++.+
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~l~~~~~~~~------------------------------- 239 (349)
T 1u19_A 191 DYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQ------------------------------- 239 (349)
T ss_dssp CCSCCCGGGTHHHHHHHHHHHTTHHHHHHHHHHHTTTTTSSCSCCCSSC-------------------------------
T ss_pred cccCccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc-------------------------------
Confidence 32 123445556677889999999999999887754432110
Q ss_pred ccCCCCCCccccccccccCCCccccccccccccccccccccccccchhhHHhhhhhHHHHHHHHHHHHhhhhhHHHHHHH
Q psy5093 279 TLHHTPSDDVEMDNVMSGHNGITRQVSNTRIIHKGHIVKNFSLSRKLSKFAKEKKAAKTLGIVMGVFIVCWLPFFVVNLL 358 (662)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~f~i~~~P~~i~~~~ 358 (662)
+..++.++++|++++++++++.|++||+|+.+..++
T Consensus 240 --------------------------------------------~~~~~~~~~~~~~~~~~~i~~~f~i~~~P~~i~~~~ 275 (349)
T 1u19_A 240 --------------------------------------------ESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFY 275 (349)
T ss_dssp --------------------------------------------SSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------------------cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHh
Confidence 001122367899999999999999999999998887
Q ss_pred HHhhccccCCCchhHHHHHHHHHHHHhhccccchhhhhcChhHHHHHHHhcccCC
Q psy5093 359 SAVCTKCFWSEQDEELISAVVTWLGWINSGMNPVIYACWSRDFRSKEKILNHKIS 413 (662)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~nP~IY~~~~~~fR~~~~~l~~~~~ 413 (662)
...... ......+..+..++.++|+++||+||++++++||+++++++|+.+
T Consensus 276 ~~~~~~----~~~~~~~~~~~~~l~~~ns~~nPiiY~~~~~~fR~~~~~~~~c~~ 326 (349)
T 1u19_A 276 IFTHQG----SDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGK 326 (349)
T ss_dssp HHHTTT----SCCCHHHHHHHHHHGGGGGTHHHHHHHHTCHHHHHHHHHHHTSSC
T ss_pred heecCC----cccchHHHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHHhcccC
Confidence 766432 222345667888899999999999999999999999998876543
No 16
>4eiy_A Adenosine receptor A2A/soluble cytochrome B562 CH; novel protein engineering, GPCR network, PSI-biology, struct genomics, membrane protein, GPCR; HET: ZMA CLR OLA OLC OLB; 1.80A {Homo sapiens} PDB: 3vg9_A* 3vga_A* 2ydv_A* 2ydo_A* 3uza_A* 3rey_A* 3rfm_A* 3pwh_A* 3uzc_A* 4er9_A
Probab=100.00 E-value=1.3e-40 Score=352.42 Aligned_cols=363 Identities=25% Similarity=0.389 Sum_probs=241.0
Q ss_pred HhHHHHHHHHHHHHHHHHHHhhHhhhhheeccccccchhhHHHHHHHHHHHhhhhhcccHHHHHhhccccccccccchhH
Q psy5093 48 AQQRTLLVSTLSLFSLVTVFGNALVMIAVVRERYLHTSTNYFIMSLALADCLVGLVVMPFSALYELLDHNWIFGLNWCDS 127 (662)
Q Consensus 48 ~~~~~i~~~~~~ii~i~gl~gN~~vi~~i~~~~~lr~~~~~ll~~Lai~Dll~~l~~~p~~~~~~~~~~~~~~~~~~C~~ 127 (662)
.....+..+++.+++++|++||+++++++.+++++|++.++|++|||++|++.+++.+|+.+... ..|..+...|++
T Consensus 28 ~~~~~~~~~i~~~i~~~gi~gN~~vl~~~~~~~~l~~~~~~~l~~La~~Dll~~~~~~p~~~~~~---~~~~~~~~~C~~ 104 (447)
T 4eiy_A 28 IMGSSVYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAITIS---TGFCAACHGCLF 104 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHTHHHHHHHHH---TTCEEEHHHHHH
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHHHHHHHHccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cccccCccHHHH
Confidence 34456788899999999999999999999999999999999999999999999998899766533 356778899999
Q ss_pred HHHhhHHHHHHHHHHHHHHHHHHhhhhcCCCCCCccccchhhhHHHHHHHHHHHhhhhhHHHhhhccccCCC---CCCcc
Q psy5093 128 WRSLDVLFSTASILNLCVISLDRYWAITDPLTYPSRMSTRRAYIWIAIVWICSGGISFPAILWWRAVRNEEV---PKNKC 204 (662)
Q Consensus 128 ~~~~~~~~~~~s~~~l~~iaidRy~~I~~P~~y~~~~t~~~~~~~i~~~w~~s~~~~~~~~~~~~~~~~~~~---~~~~c 204 (662)
..++..++..+|.+++++||+|||++|++|++|++.++++++..+++++|++++++++|+++.+........ ....|
T Consensus 105 ~~~~~~~~~~~S~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~Wi~s~~~~~~~~~~~~~~~~~~~~~~~~~~c 184 (447)
T 4eiy_A 105 IACFVLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNNCGQPKEGKNHSQGC 184 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHSCHHHHHHHHHHHHHHHHHHHTGGGGTCSSTTSCCHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHeEEecccccchhhhHHHHHHHHhHHHHHHHHHHHhhhheeccccccCccccccccc
Confidence 999999999999999999999999999999999999999999999999999999999999887654432211 11123
Q ss_pred ccC----------CCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCcccccC-----CCCCCcc---cee
Q psy5093 205 PFT----------DSKGYLIFSSTISFYLPLLVMVFTYFKIYRAAVVQTKSLKVGTKQVMSG-----STSGEKE---LTL 266 (662)
Q Consensus 205 ~~~----------~~~~~~~~~~~~~~~ip~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~-----~~~~~~~---~~~ 266 (662)
... ....+..+..++.+++|+++++++|++|++.++++.++.+......... ......+ ...
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (447)
T 4eiy_A 185 GEGQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLADLEDNWETLNDNLKVIEKADNAAQVKDALT 264 (447)
T ss_dssp CTTEEECCHHHHSCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHHH
T ss_pred cccchhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHhccCcCcCCccccchhhhccch
Confidence 211 1112233345567789999999999999999999877654321110000 0000000 000
Q ss_pred eec---cCCCCCCCCccCCCCCCcccccccc----------------ccCCCccccc-cccccccccccccccccccchh
Q psy5093 267 RIH---RGGTDHRHMTLHHTPSDDVEMDNVM----------------SGHNGITRQV-SNTRIIHKGHIVKNFSLSRKLS 326 (662)
Q Consensus 267 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 326 (662)
... .......+................. .......... ...+.....+.......++.++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (447)
T 4eiy_A 265 KMRAAALDAQKATPPKLEDKSPDSPEMKDFRHGFDILVGQIDDALKLANEGKVKEAQAAAEQLKTTRNAYIQKYLERARS 344 (447)
T ss_dssp HHHHHHHHHHC---------------CHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHTHHHHHHHTHHHHHHHHHH
T ss_pred hhhccCCCCCCCCCCCCcCCCCCCcccccccCCCCCCCCccchhhhhcccCCcCcccchhhhhcccccchhhccccchhH
Confidence 000 0000000000000000000000000 0000000000 0000000000000001122334
Q ss_pred hHHhhhhhHHHHHHHHHHHHhhhhhHHHHHHHHHhhccccCCCchhHHHHHHHHHHHHhhccccchhhhhcChhHHHHHH
Q psy5093 327 KFAKEKKAAKTLGIVMGVFIVCWLPFFVVNLLSAVCTKCFWSEQDEELISAVVTWLGWINSGMNPVIYACWSRDFRSKEK 406 (662)
Q Consensus 327 ~~~~~~~~~~~l~~i~~~f~i~~~P~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~nP~IY~~~~~~fR~~~~ 406 (662)
+.++++|+++++++++++|++||+|+.++.++..+.++. .....++..+..++.++|+++||+||++++++||++++
T Consensus 345 ~~~~~~r~~k~l~~vv~~F~icw~P~~i~~~~~~~~~~~---~~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~~~ 421 (447)
T 4eiy_A 345 TLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDC---SHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFR 421 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTS---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhhhheeccHHHHHHHHHHhcCcc---cccchHHHHHHHHHHHHHhccchhhhHhccHHHHHHHH
Confidence 556899999999999999999999999999988775432 33456677899999999999999999999999999999
Q ss_pred HhcccCCccc
Q psy5093 407 ILNHKISPVV 416 (662)
Q Consensus 407 ~l~~~~~~~~ 416 (662)
++++++.++.
T Consensus 422 ~~~~~~~~r~ 431 (447)
T 4eiy_A 422 KIIRSHVLRQ 431 (447)
T ss_dssp HHHHHTC---
T ss_pred HHHHHHHhcc
Confidence 9988776553
No 17
>4amj_A Beta-1 adrenergic receptor; membrane protein, 7TMR BETA1-adrenoceptor, stabilising mutat biased agonist; HET: CVD 2CV; 2.30A {Meleagris gallopavo} PDB: 2y01_A* 2y02_A* 2y03_A* 2y04_A* 4ami_A* 2y00_A* 2vt4_A* 2ycw_A* 2ycx_A* 2ycy_A* 2ycz_A*
Probab=100.00 E-value=5.5e-38 Score=315.88 Aligned_cols=292 Identities=40% Similarity=0.661 Sum_probs=232.8
Q ss_pred HHhHHHHHHHHHHHHHHHHHHhhHhhhhheeccccccchhhHHHHHHHHHHHhhhhhcccHHHHHhhccccccccccchh
Q psy5093 47 LAQQRTLLVSTLSLFSLVTVFGNALVMIAVVRERYLHTSTNYFIMSLALADCLVGLVVMPFSALYELLDHNWIFGLNWCD 126 (662)
Q Consensus 47 ~~~~~~i~~~~~~ii~i~gl~gN~~vi~~i~~~~~lr~~~~~ll~~Lai~Dll~~l~~~p~~~~~~~~~~~~~~~~~~C~ 126 (662)
.+..+.+..+++.+++++|++||+++++++.+++++|++.+++++|||++|++.+++.+|+.+... ..+.|.+++..|+
T Consensus 7 ~~~~~~~~~~~~~~~~~~gi~gN~lvi~~i~~~~~~~~~~~~ll~~LaiaDll~~~~~~p~~~~~~-~~~~~~~~~~~C~ 85 (315)
T 4amj_A 7 SQQWEAGMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLV-VRGTWLWGSFLCE 85 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHHCCCCCHHHHHHHH-HHSSCCSCHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhchhhcchHHHHHHHHHHHHHHHHHHhccHHHHHH-hcCCeeccccHHH
Confidence 345667888999999999999999999999999999999999999999999999988888766544 4568999999999
Q ss_pred HHHHhhHHHHHHHHHHHHHHHHHHhhhhcCCCCCCccccchhhhHHHHHHHHHHHhhhhhHHHhhhccccCCC------C
Q psy5093 127 SWRSLDVLFSTASILNLCVISLDRYWAITDPLTYPSRMSTRRAYIWIAIVWICSGGISFPAILWWRAVRNEEV------P 200 (662)
Q Consensus 127 ~~~~~~~~~~~~s~~~l~~iaidRy~~I~~P~~y~~~~t~~~~~~~i~~~w~~s~~~~~~~~~~~~~~~~~~~------~ 200 (662)
+..++..++..+|.+++++||+|||++|++|++|++.++++++..+++++|+++++.++++.+.......... .
T Consensus 86 ~~~~~~~~~~~~S~~~l~~isidRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~~~~c~~~ 165 (315)
T 4amj_A 86 LWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIMMHWWRDEDPQALKCYQD 165 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCSHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccchhhHHHhhhHHHHHHHHHHHHHHHHHhccccCCCccccccc
Confidence 9999999999999999999999999999999999888999999999999999999999888775433222111 1
Q ss_pred CCccccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCcccccCCCCCCccceeeeccCCCCCCCCcc
Q psy5093 201 KNKCPFTDSKGYLIFSSTISFYLPLLVMVFTYFKIYRAAVVQTKSLKVGTKQVMSGSTSGEKELTLRIHRGGTDHRHMTL 280 (662)
Q Consensus 201 ~~~c~~~~~~~~~~~~~~~~~~ip~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (662)
...|.......|.....++.+++|+++++++|.+|++.++++.++.+...
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~~~~~~~~~~~~~------------------------------ 215 (315)
T 4amj_A 166 PGCCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQIRKIDRAS------------------------------ 215 (315)
T ss_dssp TTCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHTC--------------------------------------
T ss_pred cccchhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccc------------------------------
Confidence 12223334455666677778889999999999999999987655332110
Q ss_pred CCCCCCccccccccccCCCccccccccccccccccccccccccchhhHHhhhhhHHHHHHHHHHHHhhhhhHHHHHHHHH
Q psy5093 281 HHTPSDDVEMDNVMSGHNGITRQVSNTRIIHKGHIVKNFSLSRKLSKFAKEKKAAKTLGIVMGVFIVCWLPFFVVNLLSA 360 (662)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~f~i~~~P~~i~~~~~~ 360 (662)
+.+..+...++++|+++++.+++++|++||+|+.+..++..
T Consensus 216 ---------------------------------------~~~~~~~~~~~~~k~~~~~~~~~~~f~i~~~P~~i~~~~~~ 256 (315)
T 4amj_A 216 ---------------------------------------KRKTSRVMLMREHKALKTLGIIMGVFTLCWLPFFLVNIVNV 256 (315)
T ss_dssp -------------------------------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------------ccccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00111223347889999999999999999999999999887
Q ss_pred hhccccCCCchhHHHHHHHHHHHHhhccccchhhhhcChhHHHHHHHhcccCCc
Q psy5093 361 VCTKCFWSEQDEELISAVVTWLGWINSGMNPVIYACWSRDFRSKEKILNHKISP 414 (662)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~l~~~ns~~nP~IY~~~~~~fR~~~~~l~~~~~~ 414 (662)
...+ ........+..++.++|+++||+||+ ++++||+++++++++.+.
T Consensus 257 ~~~~-----~~~~~~~~~~~~l~~~ns~~nPiiY~-~~~~fR~~~~~~l~~~~~ 304 (315)
T 4amj_A 257 FNRD-----LVPDWLFVAFNWLGYANSAMNPIIYC-RSPDFRKAFKRLLAFPRK 304 (315)
T ss_dssp HCTT-----SSCHHHHHHHHHHHHHGGGTHHHHGG-GSHHHHHHHHHHHC----
T ss_pred hcCc-----cchHHHHHHHHHHHHHhccccHHHHc-CcHHHHHHHHHHhCCCCc
Confidence 6532 23456677888899999999999999 999999999998876544
No 18
>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor, nanobody, G protein-coupled RE GPCR, signal transduction, G protein signaling; HET: P0G; 3.20A {Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A 4gbr_A*
Probab=100.00 E-value=1.5e-37 Score=334.06 Aligned_cols=313 Identities=38% Similarity=0.639 Sum_probs=235.1
Q ss_pred hHHhHHHHHHHHHHHHHHHHHHhhHhhhhheeccccccchhhHHHHHHHHHHHhhhhhcccHHHHHhhccccccccccch
Q psy5093 46 ELAQQRTLLVSTLSLFSLVTVFGNALVMIAVVRERYLHTSTNYFIMSLALADCLVGLVVMPFSALYELLDHNWIFGLNWC 125 (662)
Q Consensus 46 ~~~~~~~i~~~~~~ii~i~gl~gN~~vi~~i~~~~~lr~~~~~ll~~Lai~Dll~~l~~~p~~~~~~~~~~~~~~~~~~C 125 (662)
..+....+..+++.+++++|++||+++++++.+++++|++.++|++|||++|++.+++.+|+.+.... .+.|.++...|
T Consensus 177 ~~~~~~~~~~i~~~ii~~~gi~gN~lvi~vi~~~~~lr~~~~~ll~nLAiaDll~~~~~~p~~~~~~~-~~~~~~~~~~C 255 (514)
T 3sn6_R 177 ADEVWVVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHIL-TKTWTFGNFWC 255 (514)
T ss_dssp --CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHTTTTTHHHHHHHHHH-HTSCCSCSHHH
T ss_pred CCchHHHHHHHHHHHHHHHHHHhHHHhhhheecccccccHHHHHHHHHHHHHHHHHHHhCHHHHHHHH-cCCeeCCcchh
Confidence 34445677889999999999999999999999999999999999999999999999988997666554 56899999999
Q ss_pred hHHHHhhHHHHHHHHHHHHHHHHHHhhhhcCCCCCCccccchhhhHHHHHHHHHHHhhhhhHHHhhhccccCC------C
Q psy5093 126 DSWRSLDVLFSTASILNLCVISLDRYWAITDPLTYPSRMSTRRAYIWIAIVWICSGGISFPAILWWRAVRNEE------V 199 (662)
Q Consensus 126 ~~~~~~~~~~~~~s~~~l~~iaidRy~~I~~P~~y~~~~t~~~~~~~i~~~w~~s~~~~~~~~~~~~~~~~~~------~ 199 (662)
++..++..++..+|.+++++||+|||++|++|++|++.++++++..+++++|++++++++++.+......... .
T Consensus 256 ~~~~~l~~~~~~~S~~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~Wi~s~l~~~~p~~~~~~~~~~~~~~~c~~ 335 (514)
T 3sn6_R 256 EFWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYRATHQEAINCYA 335 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHCCHHHHHHHHHHHHHHHHHTTHHHHHTTTTC---CHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccchhccchHHHHHHHHHHHHHHHHHhhhhhccceecccCcccceee
Confidence 9999999999999999999999999999999999998899999999999999999999977665432221111 0
Q ss_pred CCCccccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCcccccCCCCCCccceeeeccCCCCCCCCc
Q psy5093 200 PKNKCPFTDSKGYLIFSSTISFYLPLLVMVFTYFKIYRAAVVQTKSLKVGTKQVMSGSTSGEKELTLRIHRGGTDHRHMT 279 (662)
Q Consensus 200 ~~~~c~~~~~~~~~~~~~~~~~~ip~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (662)
...++.......|.++..++.+++|+++++++|.+|++.++++.++.+........+...+..
T Consensus 336 ~~~~~~~~~~~~y~~~~~~~~~~lP~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~----------------- 398 (514)
T 3sn6_R 336 EETCCDFFTNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLQKIDKSEGRFHVQNLSQVE----------------- 398 (514)
T ss_dssp SSSCCCCCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC---------------------------
T ss_pred cccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccc-----------------
Confidence 112223334556777788889999999999999999999998877654322111000000000
Q ss_pred cCCCCCCccccccccccCCCccccccccccccccccccccccccchhhHHhhhhhHHHHHHHHHHHHhhhhhHHHHHHHH
Q psy5093 280 LHHTPSDDVEMDNVMSGHNGITRQVSNTRIIHKGHIVKNFSLSRKLSKFAKEKKAAKTLGIVMGVFIVCWLPFFVVNLLS 359 (662)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~f~i~~~P~~i~~~~~ 359 (662)
+........++..+..++++|+++++++++++|++||+|+.+..++.
T Consensus 399 ---------------------------------~~~~~~~~~~~~~~~~~~~~r~~~~l~~iv~~F~lcwlP~~i~~~~~ 445 (514)
T 3sn6_R 399 ---------------------------------QDGRTGHGLRRSSKFCLKEHKALKTLGIIMGTFTLCWLPFFIVNIVH 445 (514)
T ss_dssp ------------------------------------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------ccccccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00000001111222334789999999999999999999999999887
Q ss_pred HhhccccCCCchhHHHHHHHHHHHHhhccccchhhhhcChhHHHHHHHhcccCCcc
Q psy5093 360 AVCTKCFWSEQDEELISAVVTWLGWINSGMNPVIYACWSRDFRSKEKILNHKISPV 415 (662)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~nP~IY~~~~~~fR~~~~~l~~~~~~~ 415 (662)
.... ......+..+..++.++|+++||+||+ ++++||+++++++|+.++.
T Consensus 446 ~~~~-----~~~~~~~~~~~~~l~~~ns~~NPiIY~-~~~~fR~~~~~~l~~~~~~ 495 (514)
T 3sn6_R 446 VIQD-----NLIRKEVYILLNWIGYVNSGFNPLIYC-RSPDFRIAFQELLCLRRSS 495 (514)
T ss_dssp HHST-----TSSCHHHHHHHHHHHHHHHHHHHHHHT-TCHHHHHHHHTTCC-----
T ss_pred HHcc-----cccchHHHHHHHHHHHHHHhhhHHhhc-CCHHHHHHHHHHhCcCccc
Confidence 7643 223455677888999999999999999 9999999999998765544
No 19
>4grv_A Neurotensin receptor type 1, lysozyme chimera; G-protein coupled receptor, G-protein, signaling protein-agonist complex; HET: EPE; 2.80A {Rattus norvegicus}
Probab=99.93 E-value=4.8e-26 Score=243.72 Aligned_cols=79 Identities=23% Similarity=0.461 Sum_probs=66.5
Q ss_pred hhhhhhhhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhhcccccCC---cchhHHHHHHHHHHHHhhhhhHHHHHhccccc
Q psy5093 584 LSKFAKEKKAAKTLGIVMGVFIVCWLPFFVVNLLSAVCTKCFWSE---QDEELISAVVTWLGWINSGMNPVIYACWSRDF 660 (662)
Q Consensus 584 ~~~~~~~~k~~~~~~~vv~~f~icw~P~~i~~l~~~~~~~~~~~~---~~~~~~~~~~~~l~~~ns~iNPiiY~~~~~~f 660 (662)
.++.++|+|++||+++|+++|++||+||+++.++..+++++.... .....++.++.||+|+|||+||+||+++|++|
T Consensus 398 ~~~~~~erk~~k~L~iVv~~F~iCWlPf~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~Y~NS~iNPiIY~~~n~~F 477 (510)
T 4grv_A 398 SGSVQALRHGVLVARAVVIAFVVCWLPYHVRRLMFCYISDEQWTTFLFDFYHYFYMLTNALAYASSAINPILYNLVSANF 477 (510)
T ss_dssp TSTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH
Confidence 345668899999999999999999999999999999887543222 12345667889999999999999999999999
Q ss_pred cC
Q psy5093 661 RR 662 (662)
Q Consensus 661 R~ 662 (662)
||
T Consensus 478 R~ 479 (510)
T 4grv_A 478 RQ 479 (510)
T ss_dssp CC
T ss_pred HH
Confidence 97
No 20
>3vw7_A Proteinase-activated receptor 1, lysozyme; high resolution structure, protease-activated receptor 1, in conformation, antagonist vorapaxar; HET: VPX OLC; 2.20A {Homo sapiens}
Probab=99.88 E-value=8.9e-23 Score=217.85 Aligned_cols=77 Identities=18% Similarity=0.242 Sum_probs=63.2
Q ss_pred hhhhhhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhhcccccCCcchhHHHHHHHHHHHHhhhhhHHHHHhccccccC
Q psy5093 586 KFAKEKKAAKTLGIVMGVFIVCWLPFFVVNLLSAVCTKCFWSEQDEELISAVVTWLGWINSGMNPVIYACWSRDFRR 662 (662)
Q Consensus 586 ~~~~~~k~~~~~~~vv~~f~icw~P~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~iNPiiY~~~~~~fR~ 662 (662)
+.++++|++||+++|+++|++||+||+++.++..+.............++.++.+|+++||++||+||++++++||+
T Consensus 381 ~~~~~~r~~k~l~~v~~~F~icwlP~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~ns~iNPiIY~~~~~~fR~ 457 (484)
T 3vw7_A 381 NRSKKSRALFLSAAVFCIFIICFGPTNVLLIAHYSFLSHTSTTEAAYFAYLLCVCVSSISCCIDPLIYYYASSECQR 457 (484)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHTCTTCTTSHHHHHHHHHHHHHHTTHHHHHHHHHHHTSSCC--
T ss_pred chhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccccchHHHHHhhHHHHH
Confidence 45678899999999999999999999999999876543222334455777889999999999999999999999996
No 21
>2rh1_A Beta-2-adrenergic receptor/T4-lysozyme chimera; GPCR, 7TM, fusion, lipidic cubic phase, lipidic, mesophase, cholesterol, membrane protein; HET: MAL CAU CLR PLM 12P; 2.40A {Homo sapiens} PDB: 3p0g_A* 3d4s_A* 3ny8_A* 3ny9_A* 3nya_A* 3pds_A*
Probab=99.87 E-value=4.6e-21 Score=204.82 Aligned_cols=70 Identities=47% Similarity=0.958 Sum_probs=62.2
Q ss_pred hhhhhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhhcccccCCcchhHHHHHHHHHHHHhhhhhHHHHHhccccccC
Q psy5093 587 FAKEKKAAKTLGIVMGVFIVCWLPFFVVNLLSAVCTKCFWSEQDEELISAVVTWLGWINSGMNPVIYACWSRDFRR 662 (662)
Q Consensus 587 ~~~~~k~~~~~~~vv~~f~icw~P~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~iNPiiY~~~~~~fR~ 662 (662)
.++|+|++||+++|+++|++||+||+++.++..+++. ..+..++.++.||+|+||++||+||++ +++||+
T Consensus 400 ~~~e~ka~ktl~ivv~~F~icWlP~~i~~l~~~~~~~-----~~~~~~~~~~~~L~y~NS~iNPiIY~~-n~~FR~ 469 (500)
T 2rh1_A 400 CLKEHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDN-----LIRKEVYILLNWIGYVNSGFNPLIYCR-SPDFRI 469 (500)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTT-----SSCHHHHHHHHHHHHHGGGTHHHHGGG-SHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-----cccHHHHHHHHHHHHHHHhhcchhhhc-cHHHHH
Confidence 3578999999999999999999999999999988743 335677888999999999999999996 999995
No 22
>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G protein-coupled receptor, GPCR, SI protein-antagonist complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A*
Probab=99.85 E-value=2.8e-21 Score=205.26 Aligned_cols=88 Identities=23% Similarity=0.454 Sum_probs=69.7
Q ss_pred cCCcccccceeeeehhhHHHHHHhhchhhhhhcccccC-CccCCCCcee--cCCchhHhhhhhHHHHHhHHHHHHHHHHH
Q psy5093 418 LLPMCMYPQYLVLISLCYYVTTLVLTAPAILWWRAVRN-EEVPKNKCPF--TDSKGYLIFSSTISFYLPLLVMVFTYFKI 494 (662)
Q Consensus 418 ~y~~~~~~~~~~~~~~~~w~~~~~~~~p~~~~~~~~~~-~~~~~~~C~~--~~~~~y~~~~~~~~f~lP~~ii~~~Y~~I 494 (662)
.|...++.+.+..++++.|+.+++..+|+++.+....+ ...+...|.. .....|.++..++.|++|+++|+++|++|
T Consensus 130 ~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~p~~ii~~~y~~I 209 (467)
T 3uon_A 130 TYPVKRTTKMAGMMIAAAWVLSFILWAPAILFWQFIVGVRTVEDGECYIQFFSNAAVTFGTAIAAFYLPVIIMTVLYWHI 209 (467)
T ss_dssp TSGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCSSCCCCGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred ccccccchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCcceeecCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56677888899999999999999999999888765422 2234456743 34567888888899999999999999999
Q ss_pred HHHHHHhhhcc
Q psy5093 495 YRAAVVQTKSL 505 (662)
Q Consensus 495 ~~~~~~~~~~~ 505 (662)
++.++++.++.
T Consensus 210 ~~~l~~~~~~~ 220 (467)
T 3uon_A 210 SRASKSRINIF 220 (467)
T ss_dssp HHHHTTCCCHH
T ss_pred HHHHHHhhhHH
Confidence 99999876543
No 23
>3v2y_A Sphingosine 1-phosphate receptor 1, lysozyme CHIM; EDG receptor, lipid receptor, multiple sclerosi autoimmunity, structural genomics, PSI-biology; HET: ML5 NAG; 2.80A {Homo sapiens} PDB: 3v2w_A*
Probab=99.85 E-value=4.3e-21 Score=205.88 Aligned_cols=72 Identities=35% Similarity=0.605 Sum_probs=60.5
Q ss_pred hhhhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhhcccccCCcchhHHHHHHHHHHHHhhhhhHHHHHhccccccC
Q psy5093 588 AKEKKAAKTLGIVMGVFIVCWLPFFVVNLLSAVCTKCFWSEQDEELISAVVTWLGWINSGMNPVIYACWSRDFRR 662 (662)
Q Consensus 588 ~~~~k~~~~~~~vv~~f~icw~P~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~iNPiiY~~~~~~fR~ 662 (662)
++++|+++|+++++++|++||+||++..++..+++.. .........++.+|+++|||+||+||++++++||+
T Consensus 414 ~~~~k~~~~~~~vv~~F~vcw~P~~i~~~~~~~~~~~---~~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fr~ 485 (520)
T 3v2y_A 414 SENVALLKTVIIVLSVFIACWAPLFILLLLDVGCKVK---TCDILFRAEYFLVLAVLNSGTNPIIYTLTNKEMRR 485 (520)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCTT---TCSTTTSCHHHHHHHHHGGGTHHHHHHHHCHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc---cccHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHH
Confidence 4689999999999999999999999999998876531 11233445567889999999999999999999985
No 24
>3odu_A C-X-C chemokine receptor type 4, lysozyme chimera; structural genomics, PSI-2, protein structure initiative; HET: ITD OLC OLA; 2.50A {Homo sapiens} PDB: 3oe8_A* 3oe6_A* 3oe0_A* 3oe9_A* 2k03_B* 2k04_B 2k05_B*
Probab=99.84 E-value=3.2e-22 Score=214.60 Aligned_cols=77 Identities=23% Similarity=0.437 Sum_probs=63.3
Q ss_pred hhhhhhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhhccccc-----CCcchhHHHHHHHHHHHHhhhhhHHHHHhccccc
Q psy5093 586 KFAKEKKAAKTLGIVMGVFIVCWLPFFVVNLLSAVCTKCFW-----SEQDEELISAVVTWLGWINSGMNPVIYACWSRDF 660 (662)
Q Consensus 586 ~~~~~~k~~~~~~~vv~~f~icw~P~~i~~l~~~~~~~~~~-----~~~~~~~~~~~~~~l~~~ns~iNPiiY~~~~~~f 660 (662)
+.++++|++|++++++++|++||+||+++.++..+...... .......+..++.+|+++||++||+||++++++|
T Consensus 404 ~~~~~~k~~k~l~~vv~~F~icw~P~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~ns~~NPiIY~~~~~~f 483 (502)
T 3odu_A 404 KGHQKRKALKTTVILILAFFACWLPYYIGISIDSFILLEIIKQGCEFENTVHKWISITEALAFFHCCLNPILYAFLGAKF 483 (502)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCCCHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTTTTCCC
T ss_pred hhHhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhhhhccccccchHHHHHHHHHHHHHhcccchhhhhhcCHHH
Confidence 45678999999999999999999999999999876521100 1234556667899999999999999999999999
Q ss_pred cC
Q psy5093 661 RR 662 (662)
Q Consensus 661 R~ 662 (662)
|+
T Consensus 484 R~ 485 (502)
T 3odu_A 484 KT 485 (502)
T ss_dssp CC
T ss_pred HH
Confidence 96
No 25
>3rze_A Histamine H1 receptor, lysozyme chimera; structural genomics, PSI-biology, membrane protein, GPCR NET GPCR, hydrolase; HET: 5EH D7V OLC; 3.10A {Homo sapiens}
Probab=99.84 E-value=1.5e-21 Score=206.44 Aligned_cols=72 Identities=40% Similarity=0.981 Sum_probs=62.3
Q ss_pred hhhhhhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhhcccccCCcchhHHHHHHHHHHHHhhhhhHHHHHhccccccC
Q psy5093 586 KFAKEKKAAKTLGIVMGVFIVCWLPFFVVNLLSAVCTKCFWSEQDEELISAVVTWLGWINSGMNPVIYACWSRDFRR 662 (662)
Q Consensus 586 ~~~~~~k~~~~~~~vv~~f~icw~P~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~iNPiiY~~~~~~fR~ 662 (662)
+.++|+|++|++++++++|++||+||.+..++..+.+.. ....+..++.+|+++||++||+||++++++||+
T Consensus 364 ~~~~~~k~~k~l~~vv~~f~icwlP~~i~~l~~~~~~~~-----~~~~~~~~~~~L~~~ns~~NPiIY~~~~~~fR~ 435 (452)
T 3rze_A 364 HMNRERKAAKQLGFIMAAFILCWIPYFIFFMVIAFCKNC-----CNEHLHMFTIWLGYINSTLNPLIYPLCNENFKK 435 (452)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCC-----SCTTTHHHHHHHHHHHHHHHHHHHHHHCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhccc-----ccHHHHHHHHHHHHHHhcccchhhhhccHHHHH
Confidence 345789999999999999999999999999998877542 234455688899999999999999999999995
No 26
>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A*
Probab=99.83 E-value=6.7e-20 Score=195.78 Aligned_cols=74 Identities=36% Similarity=0.739 Sum_probs=65.1
Q ss_pred hhhhhhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhhcccccCCcchhHHHHHHHHHHHHhhhhhHHHHHhccccccC
Q psy5093 586 KFAKEKKAAKTLGIVMGVFIVCWLPFFVVNLLSAVCTKCFWSEQDEELISAVVTWLGWINSGMNPVIYACWSRDFRR 662 (662)
Q Consensus 586 ~~~~~~k~~~~~~~vv~~f~icw~P~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~iNPiiY~~~~~~fR~ 662 (662)
+.++++|++|++++++++|++||+||.++.++..+.+.+ ......+..++.+|+++||++||+||++++++||+
T Consensus 386 ~~~~~~r~~~~l~~iv~~F~icw~P~~i~~~~~~~~~~~---~~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~ 459 (488)
T 3eml_A 386 TLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDC---SHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQ 459 (488)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTS---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccCcc---ccccHHHHHHHHHHHHHHhhhchhhhhhcCHHHHH
Confidence 356889999999999999999999999999998887643 24456677789999999999999999999999995
No 27
>4dkl_A MU-type opioid receptor, lysozyme chimera; G-protein coupled receptor, 7 transmembrane receptor, signal protein-antagonist complex; HET: BF0 CLR MPG 1PE; 2.80A {Mus musculus} PDB: 4ej4_A* 4djh_A*
Probab=99.83 E-value=1.5e-20 Score=199.49 Aligned_cols=74 Identities=28% Similarity=0.525 Sum_probs=63.6
Q ss_pred hhhhhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhhcccccCCcchhHHHHHHHHHHHHhhhhhHHHHHhccccccC
Q psy5093 587 FAKEKKAAKTLGIVMGVFIVCWLPFFVVNLLSAVCTKCFWSEQDEELISAVVTWLGWINSGMNPVIYACWSRDFRR 662 (662)
Q Consensus 587 ~~~~~k~~~~~~~vv~~f~icw~P~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~iNPiiY~~~~~~fR~ 662 (662)
.++|+|++||+++++++|++||+||++..++..+.... ........+.++.+|+++||++||+||++++++||+
T Consensus 375 ~~~~~r~~k~l~~v~~~F~icw~P~~i~~l~~~~~~~~--~~~~~~~~~~~~~~L~~~ns~~NPiIY~~~~~~fR~ 448 (464)
T 4dkl_A 375 DRNLRRITRMVLVVVAVFIVCWTPIHIYVIIKALITIP--ETTFQTVSWHFCIALGYTNSCLNPVLYAFLDENFKR 448 (464)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhcCC--ccccchhHHHHHHHHHHhhhchhHHHHHHhhHHHHH
Confidence 46788999999999999999999999999998876421 234455667788899999999999999999999995
No 28
>3pbl_A D(3) dopamine receptor, lysozyme chimera; structural genomics, PSI-2, PSI-biology, protein structure initiative; HET: ETQ MAL; 2.89A {Homo sapiens}
Probab=99.83 E-value=7.7e-21 Score=202.63 Aligned_cols=71 Identities=44% Similarity=0.958 Sum_probs=62.7
Q ss_pred hhhhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhhcccccCCcchhHHHHHHHHHHHHhhhhhHHHHHhccccccC
Q psy5093 588 AKEKKAAKTLGIVMGVFIVCWLPFFVVNLLSAVCTKCFWSEQDEELISAVVTWLGWINSGMNPVIYACWSRDFRR 662 (662)
Q Consensus 588 ~~~~k~~~~~~~vv~~f~icw~P~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~iNPiiY~~~~~~fR~ 662 (662)
++++|++||+++++++|++||+||.+..++..+++. ......++.++.+|+++||++||+||++++++||+
T Consensus 394 ~~~~k~~k~l~~iv~~F~icw~P~~i~~~~~~~~~~----~~~~~~~~~~~~~L~~~ns~~NPiIY~~~~~~fR~ 464 (481)
T 3pbl_A 394 LREKKATQMVAIVLGAFIVCWLPFFLTHVLNTHCQT----CHVSPELYSATTWLGYVNSALNPVIYTTFNIEFRK 464 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSS----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
T ss_pred chhhhHHHHHHHHHHHHHHHhhHHHHHHHHHhcccc----ccCcHHHHHHHHHHHHHhhccchHHHHHcCHHHHH
Confidence 368999999999999999999999999999887653 23456677889999999999999999999999995
No 29
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*
Probab=99.81 E-value=5.4e-19 Score=186.34 Aligned_cols=177 Identities=19% Similarity=0.314 Sum_probs=130.5
Q ss_pred cCCcccccceeeeehhhHHHHHHhhchhhhhhcccccCCccCCCCceecC------CchhHhhhhhHHHHHhHHHHHHHH
Q psy5093 418 LLPMCMYPQYLVLISLCYYVTTLVLTAPAILWWRAVRNEEVPKNKCPFTD------SKGYLIFSSTISFYLPLLVMVFTY 491 (662)
Q Consensus 418 ~y~~~~~~~~~~~~~~~~w~~~~~~~~p~~~~~~~~~~~~~~~~~C~~~~------~~~y~~~~~~~~f~lP~~ii~~~Y 491 (662)
.|...++++.+..++++.|+.++++.+|+++.+...... .....|.... ...|.+...++.|++|+++|+++|
T Consensus 142 ~~~~~~~~~~~~~~i~~~W~~s~~~~~~~~~~~~~~~~~-~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~lP~~ii~~~y 220 (448)
T 2z73_A 142 AASKKMSHRRAFIMIIFVWLWSVLWAIGPIFGWGAYTLE-GVLCNCSFDYISRDSTTRSNILCMFILGFFGPILIIFFCY 220 (448)
T ss_dssp TTCCCCCHHHHHHHHHHHHHHHHHHHSGGGGTSSCEEEC-TTSSSEEECCSCCSHHHHHHHHHHHHHTTHHHHHHHHHHH
T ss_pred cccceechhHHHHHHHHHHHHHHHHHHHHHhceeeeeec-CCceeEecccccCCcchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 455677888899999999999999999998887655322 2345674332 234566667778999999999999
Q ss_pred HHHHHHHHHhhhccccCcccccCCCCCCcccccccccCCCCCCCCCcccCCCCCCccccccccCCCCcccccCCcccccc
Q psy5093 492 FKIYRAAVVQTKSLKVGTKQVMSGSTSGEKELTLRIHRGGTDHRHMTLHHTPSDDVEMDNVMSGHNGITRQVSNTRIIHK 571 (662)
Q Consensus 492 ~~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 571 (662)
.+|++.++++.++.+......
T Consensus 221 ~~I~~~l~~~~~~~~~~~~~~----------------------------------------------------------- 241 (448)
T 2z73_A 221 FNIVMSVSNHEKEMAAMAKRL----------------------------------------------------------- 241 (448)
T ss_dssp HHHHTTHHHHHHHHHHHHTTT-----------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHhhh-----------------------------------------------------------
Confidence 999999998877643211000
Q ss_pred cccccccchhhhhhhhhhhhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhhcccccCCcchhHHHHHHHHHHHHhhhhhHH
Q psy5093 572 GHIVKNFSLSRKLSKFAKEKKAAKTLGIVMGVFIVCWLPFFVVNLLSAVCTKCFWSEQDEELISAVVTWLGWINSGMNPV 651 (662)
Q Consensus 572 ~~~~~~~~~~~~~~~~~~~~k~~~~~~~vv~~f~icw~P~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~iNPi 651 (662)
+....++..+..++++|++|++++++++|++||+|+.+..++..+.... ........+..+++++||++||+
T Consensus 242 ----~~~~~~~~~~~~~~~~k~~~~l~~iv~~F~i~~~P~~i~~~~~~~~~~~----~~~~~~~~~~~~l~~~ns~~NPi 313 (448)
T 2z73_A 242 ----NAKELRKAQAGANAEMRLAKISIVIVSQFLLSWSPYAVVALLAQFGPLE----WVTPYAAQLPVMFAKASAIHNPM 313 (448)
T ss_dssp ----CCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCGG----GCCHHHHHHHHHHHHHGGGSHHH
T ss_pred ----hhHHHHhhhccccHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCcc----cCChHHHHHHHHHHHHHHhhcch
Confidence 0000111222345688999999999999999999999999988765421 22345667788999999999999
Q ss_pred HHHhccccccC
Q psy5093 652 IYACWSRDFRR 662 (662)
Q Consensus 652 iY~~~~~~fR~ 662 (662)
||++++++||+
T Consensus 314 IY~~~~~~fR~ 324 (448)
T 2z73_A 314 IYSVSHPKFRE 324 (448)
T ss_dssp HHHHHCHHHHH
T ss_pred HHHHhhHHHHH
Confidence 99999999995
No 30
>4eiy_A Adenosine receptor A2A/soluble cytochrome B562 CH; novel protein engineering, GPCR network, PSI-biology, struct genomics, membrane protein, GPCR; HET: ZMA CLR OLA OLC OLB; 1.80A {Homo sapiens} PDB: 3vg9_A* 3vga_A* 2ydv_A* 2ydo_A* 3uza_A* 3rey_A* 3rfm_A* 3pwh_A* 3uzc_A* 4er9_A
Probab=99.81 E-value=1.5e-19 Score=190.63 Aligned_cols=239 Identities=21% Similarity=0.342 Sum_probs=132.1
Q ss_pred CCcccccceeeeehhhHHHHHHhhchhhhhhcccccCCc---cCCCCcee-------c---CCchhHhhhhhHHHHHhHH
Q psy5093 419 LPMCMYPQYLVLISLCYYVTTLVLTAPAILWWRAVRNEE---VPKNKCPF-------T---DSKGYLIFSSTISFYLPLL 485 (662)
Q Consensus 419 y~~~~~~~~~~~~~~~~w~~~~~~~~p~~~~~~~~~~~~---~~~~~C~~-------~---~~~~y~~~~~~~~f~lP~~ 485 (662)
|...++.+.+..++++.|+.+++..+|++++|....... .....|.. . ....|..+..++.|++|++
T Consensus 137 ~~~~~~~~~~~~~i~~~Wi~s~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~ 216 (447)
T 4eiy_A 137 YNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNNCGQPKEGKNHSQGCGEGQVACLFEDVVPMNYMVYFNFFACVLVPLL 216 (447)
T ss_dssp HHHHSCHHHHHHHHHHHHHHHHHHHTGGGGTCSSTTSCCHHHHHHTTCCTTEEECCHHHHSCHHHHHHCCCCCCCHHHHH
T ss_pred cchhhhHHHHHHHHhHHHHHHHHHHHhhhheeccccccCccccccccccccchhhccccccchHHHHHHHHHHHHHHHHH
Confidence 455567788888899999999999999998887543221 01122421 1 1123444556677899999
Q ss_pred HHHHHHHHHHHHHHHhhhccccCcccccC-----CCCCCccccc--cc------ccCCCCCCCCCcccCCCCCCcccccc
Q psy5093 486 VMVFTYFKIYRAAVVQTKSLKVGTKQVMS-----GSTSGEKELT--LR------IHRGGTDHRHMTLHHTPSDDVEMDNV 552 (662)
Q Consensus 486 ii~~~Y~~I~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~--~~------~~~~~~~~~~~~~~~~~~~~~~~~~~ 552 (662)
+|+++|++|++.++++.++.......... .......... .+ .......... .....+..... .+.
T Consensus 217 ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~ 294 (447)
T 4eiy_A 217 LMLGVYLRIFLAARRQLADLEDNWETLNDNLKVIEKADNAAQVKDALTKMRAAALDAQKATPPK-LEDKSPDSPEM-KDF 294 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHHHHHHHC----------------C-HHH
T ss_pred HHHHHHHHHHHHHHHHhhhhhhhHHHhccCcCcCCccccchhhhccchhhhccCCCCCCCCCCC-CcCCCCCCccc-ccc
Confidence 99999999999999987765432111000 0000000000 00 0000000000 00000000000 000
Q ss_pred ccCCCCccccc-------CCccc--------c--cccccccccchhhhhhhhhhhhHHHHHHHHHHHHHHHhhhhHHHHH
Q psy5093 553 MSGHNGITRQV-------SNTRI--------I--HKGHIVKNFSLSRKLSKFAKEKKAAKTLGIVMGVFIVCWLPFFVVN 615 (662)
Q Consensus 553 ~~~~~~~~~~~-------~~~~~--------~--~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~vv~~f~icw~P~~i~~ 615 (662)
..+........ ...+. + ...+........+..++.++++|++|++++++++|++||+|+.+..
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~k~l~~vv~~F~icw~P~~i~~ 374 (447)
T 4eiy_A 295 RHGFDILVGQIDDALKLANEGKVKEAQAAAEQLKTTRNAYIQKYLERARSTLQKEVHAAKSLAIIVGLFALCWLPLHIIN 374 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHTHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCCCccchhhhhcccCCcCcccchhhhhcccccchhhccccchhHHHHHHHHHHHHHHHhhhhhheeccHHHHHH
Confidence 00000000000 00000 0 0000000001122233457889999999999999999999999999
Q ss_pred HHHHhhcccccCCcchhHHHHHHHHHHHHhhhhhHHHHHhccccccC
Q psy5093 616 LLSAVCTKCFWSEQDEELISAVVTWLGWINSGMNPVIYACWSRDFRR 662 (662)
Q Consensus 616 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~iNPiiY~~~~~~fR~ 662 (662)
++..+.+.+ ......+..++.+|+++||++||+||++++++||+
T Consensus 375 ~~~~~~~~~---~~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~ 418 (447)
T 4eiy_A 375 CFTFFCPDC---SHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQ 418 (447)
T ss_dssp HHHHHCTTS---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
T ss_pred HHHHhcCcc---cccchHHHHHHHHHHHHHhccchhhhHhccHHHHH
Confidence 998876542 24455677889999999999999999999999995
No 31
>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor, nanobody, G protein-coupled RE GPCR, signal transduction, G protein signaling; HET: P0G; 3.20A {Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A 4gbr_A*
Probab=99.80 E-value=8.3e-19 Score=188.10 Aligned_cols=188 Identities=31% Similarity=0.583 Sum_probs=123.6
Q ss_pred CCcccccceeeeehhhHHHHHHhhchhhh-hhcccccCCcc----CCCCc-eecCCchhHhhhhhHHHHHhHHHHHHHHH
Q psy5093 419 LPMCMYPQYLVLISLCYYVTTLVLTAPAI-LWWRAVRNEEV----PKNKC-PFTDSKGYLIFSSTISFYLPLLVMVFTYF 492 (662)
Q Consensus 419 y~~~~~~~~~~~~~~~~w~~~~~~~~p~~-~~~~~~~~~~~----~~~~C-~~~~~~~y~~~~~~~~f~lP~~ii~~~Y~ 492 (662)
|...++++.+..++++.|+.++++.+|+. +.+......+. ....| .......|.++..++.|++|+++|+++|.
T Consensus 290 ~~~~~t~~~~~~~i~~~Wi~s~l~~~~p~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~y~~~~~~~~~~lP~~ii~~~y~ 369 (514)
T 3sn6_R 290 YQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYRATHQEAINCYAEETCCDFFTNQAYAIASSIVSFYVPLVIMVFVYS 369 (514)
T ss_dssp HHHHCCHHHHHHHHHHHHHHHHHTTHHHHHTTTTC---CHHHHHHHSSSCCCCCCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred cchhccchHHHHHHHHHHHHHHHHHhhhhhccceecccCcccceeecccccccccccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44456777888899999999998886554 44433221110 01122 33445678888889999999999999999
Q ss_pred HHHHHHHHhhhccccCcccccCCCCCCcccccccccCCCCCCCCCcccCCCCCCccccccccCCCCcccccCCccccccc
Q psy5093 493 KIYRAAVVQTKSLKVGTKQVMSGSTSGEKELTLRIHRGGTDHRHMTLHHTPSDDVEMDNVMSGHNGITRQVSNTRIIHKG 572 (662)
Q Consensus 493 ~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 572 (662)
+|++.++++.++................ ..
T Consensus 370 ~I~~~l~~~~~~~~~~~~~~~~~~~~~~--------------------------------------------------~~ 399 (514)
T 3sn6_R 370 RVFQEAKRQLQKIDKSEGRFHVQNLSQV--------------------------------------------------EQ 399 (514)
T ss_dssp HHHHHHHHHHHHHHHHCCC-------------------------------------------------------------
T ss_pred HHHHHHHHhhhccccccccccccccccc--------------------------------------------------cc
Confidence 9999999887765432211000000000 00
Q ss_pred ccccccchhhhhhhhhhhhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhhcccccCCcchhHHHHHHHHHHHHhhhhhHHH
Q psy5093 573 HIVKNFSLSRKLSKFAKEKKAAKTLGIVMGVFIVCWLPFFVVNLLSAVCTKCFWSEQDEELISAVVTWLGWINSGMNPVI 652 (662)
Q Consensus 573 ~~~~~~~~~~~~~~~~~~~k~~~~~~~vv~~f~icw~P~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~iNPii 652 (662)
........++..+..++++|+++++++++++|++||+|+.+..++..+.+. .....+..+..+++++||++||+|
T Consensus 400 ~~~~~~~~~~~~~~~~~~~r~~~~l~~iv~~F~lcwlP~~i~~~~~~~~~~-----~~~~~~~~~~~~l~~~ns~~NPiI 474 (514)
T 3sn6_R 400 DGRTGHGLRRSSKFCLKEHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDN-----LIRKEVYILLNWIGYVNSGFNPLI 474 (514)
T ss_dssp --------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTT-----SSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc-----ccchHHHHHHHHHHHHHHhhhHHh
Confidence 000000111122233578899999999999999999999999998876532 334567778889999999999999
Q ss_pred HHhccccccC
Q psy5093 653 YACWSRDFRR 662 (662)
Q Consensus 653 Y~~~~~~fR~ 662 (662)
|+ ++++||+
T Consensus 475 Y~-~~~~fR~ 483 (514)
T 3sn6_R 475 YC-RSPDFRI 483 (514)
T ss_dssp HT-TCHHHHH
T ss_pred hc-CCHHHHH
Confidence 99 8999985
No 32
>2lnl_A C-X-C chemokine receptor type 1; G protein coupled receptor, GPCR, membrane protei transmembrane, 7TM, phospholipid, signaling, signaling PROT; NMR {Homo sapiens}
Probab=99.80 E-value=2e-18 Score=171.18 Aligned_cols=159 Identities=22% Similarity=0.366 Sum_probs=114.7
Q ss_pred CCcccccceeeeehhhHHHHHHhhchhhhhhcccccCCccCCCCce------ecCCchhHhhhhhHHHHHhHHHHHHHHH
Q psy5093 419 LPMCMYPQYLVLISLCYYVTTLVLTAPAILWWRAVRNEEVPKNKCP------FTDSKGYLIFSSTISFYLPLLVMVFTYF 492 (662)
Q Consensus 419 y~~~~~~~~~~~~~~~~w~~~~~~~~p~~~~~~~~~~~~~~~~~C~------~~~~~~y~~~~~~~~f~lP~~ii~~~Y~ 492 (662)
|...++ ++...+++.+|+.+++..+|+...+............+. ......|.+......+++|+.++.++|.
T Consensus 117 ~~~~~~-~~~~~~~~~~W~~s~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~i~~~~y~ 195 (296)
T 2lnl_A 117 TLTQKR-HLVKFVCLGCWGLSMNLSLPFFLFRQAYHPNNSSPVCYEVLGNDTAKWRMVLRILPHTFGFIVPLFVMLFCYG 195 (296)
T ss_dssp SSCCHH-HHHHHHHHHHHHHHHHHHHHHHHTSSCCCCCTTSCCCCSCCSCCTTTTTTHHHHTTTHHHHHHHHHHHHHHHH
T ss_pred cchhhh-hhhHheehHHHHHHHHHhcchhhcceeecCCCCCceeeeeccccchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344333 345566778899999999999888776543322211111 1223457777788899999999999999
Q ss_pred HHHHHHHHhhhccccCcccccCCCCCCcccccccccCCCCCCCCCcccCCCCCCccccccccCCCCcccccCCccccccc
Q psy5093 493 KIYRAAVVQTKSLKVGTKQVMSGSTSGEKELTLRIHRGGTDHRHMTLHHTPSDDVEMDNVMSGHNGITRQVSNTRIIHKG 572 (662)
Q Consensus 493 ~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 572 (662)
++.+.++++.
T Consensus 196 ~i~~~~~~~~---------------------------------------------------------------------- 205 (296)
T 2lnl_A 196 FTLRTLFKAH---------------------------------------------------------------------- 205 (296)
T ss_dssp HHTTTSSSCC----------------------------------------------------------------------
T ss_pred HHHHHHHHHh----------------------------------------------------------------------
Confidence 8864332210
Q ss_pred ccccccchhhhhhhhhhhhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhhcccccCC-----cchhHHHHHHHHHHHHhhh
Q psy5093 573 HIVKNFSLSRKLSKFAKEKKAAKTLGIVMGVFIVCWLPFFVVNLLSAVCTKCFWSE-----QDEELISAVVTWLGWINSG 647 (662)
Q Consensus 573 ~~~~~~~~~~~~~~~~~~~k~~~~~~~vv~~f~icw~P~~i~~l~~~~~~~~~~~~-----~~~~~~~~~~~~l~~~ns~ 647 (662)
.++++|++|++++++++|++||+|+++..++..+.+...... .....+..++.+|+++||+
T Consensus 206 --------------~~~~~k~~~~~~~v~~~f~icw~P~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~ 271 (296)
T 2lnl_A 206 --------------MGQKHRAMRVIFAVVLIFLLCWLPYNLVLLADTLMRTQVIQESCERRNNIGRALDATEILGFLHSC 271 (296)
T ss_dssp --------------CHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSSCSCHHHHHHHTTHHHHHHHHHGGGGGT
T ss_pred --------------hhhhhhHHHHHHHhhhheeeeehHHHHHHHHHHHhccccCCcchhhhhHHHHHHHHHHHHHHHHHH
Confidence 135778999999999999999999999999988765322111 1123566788899999999
Q ss_pred hhHHHHHhccccccC
Q psy5093 648 MNPVIYACWSRDFRR 662 (662)
Q Consensus 648 iNPiiY~~~~~~fR~ 662 (662)
+||+||++++++|||
T Consensus 272 ~NPiIY~~~~~~fR~ 286 (296)
T 2lnl_A 272 LNPIIYAFIGQNFRH 286 (296)
T ss_dssp HHHHHHHHHCSHHHH
T ss_pred HHHHHHHhcCHHHHH
Confidence 999999999999996
No 33
>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A
Probab=99.80 E-value=4.6e-18 Score=173.99 Aligned_cols=165 Identities=21% Similarity=0.398 Sum_probs=118.4
Q ss_pred cccceeeeehhhHHHHHHhhchhhhhhcccccCCccCCCCceecC--------CchhHhhhhhHHHHHhHHHHHHHHHHH
Q psy5093 423 MYPQYLVLISLCYYVTTLVLTAPAILWWRAVRNEEVPKNKCPFTD--------SKGYLIFSSTISFYLPLLVMVFTYFKI 494 (662)
Q Consensus 423 ~~~~~~~~~~~~~w~~~~~~~~p~~~~~~~~~~~~~~~~~C~~~~--------~~~y~~~~~~~~f~lP~~ii~~~Y~~I 494 (662)
++++....++++.|+.+++..+|........ . ..+...|.... ...|.+...++.|++|+++++++|.+|
T Consensus 142 ~~~~~~~~~i~~~W~~s~~~~~p~~~~~~~~-~-~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~ii~~~y~~i 219 (364)
T 2ks9_A 142 LSATATKVVICVIWVLALLLAFPQGYYSTTE-T-MPSRVVCMIEWPEHPNKIYEKVYHICVTVLIYFLPLLVIGYAYTVV 219 (364)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHTTTTTTSCCC-B-CTTCSSBCCCCSCCCTTTTHHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred cccchHHHHHHHHHHHHHHHHhHHHHHhhhe-e-cCCCCEEeecCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566667788899999999999876543322 1 22445673321 125677777888999999999999999
Q ss_pred HHHHHHhhhccccCcccccCCCCCCcccccccccCCCCCCCCCcccCCCCCCccccccccCCCCcccccCCccccccccc
Q psy5093 495 YRAAVVQTKSLKVGTKQVMSGSTSGEKELTLRIHRGGTDHRHMTLHHTPSDDVEMDNVMSGHNGITRQVSNTRIIHKGHI 574 (662)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 574 (662)
++.++++.++....
T Consensus 220 ~~~l~~~~~~~~~~------------------------------------------------------------------ 233 (364)
T 2ks9_A 220 GITLWASEIPGDSS------------------------------------------------------------------ 233 (364)
T ss_dssp HHSSCSCCCSSSSS------------------------------------------------------------------
T ss_pred HHHHHhcCCCCCcc------------------------------------------------------------------
Confidence 98776432111000
Q ss_pred ccccchhhhhhhhhhhhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhhcccccCCcchhHHHHHHHHHHHHhhhhhHHHHH
Q psy5093 575 VKNFSLSRKLSKFAKEKKAAKTLGIVMGVFIVCWLPFFVVNLLSAVCTKCFWSEQDEELISAVVTWLGWINSGMNPVIYA 654 (662)
Q Consensus 575 ~~~~~~~~~~~~~~~~~k~~~~~~~vv~~f~icw~P~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~iNPiiY~ 654 (662)
.+..++.++++|++|++++++++|++||+|+.+..++..+.+... ........+.+..+++++||++||+||+
T Consensus 234 ------~~~~~~~~~~~k~~~~~~~v~~~f~~~~~P~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~ns~~NPiiY~ 306 (364)
T 2ks9_A 234 ------DRYHEQVSAKRKVVKMMIVVVCTFAICWLPFHIFFLLPYINPDLY-LKKFIQQVYLAIMWLAMSSTMYNPIIYC 306 (364)
T ss_dssp ------SCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTSC-SSSCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ------hhhhhhHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccc-hhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000112356889999999999999999999999999887765422 2233445667788999999999999999
Q ss_pred hccccccC
Q psy5093 655 CWSRDFRR 662 (662)
Q Consensus 655 ~~~~~fR~ 662 (662)
+++++||+
T Consensus 307 ~~~~~fR~ 314 (364)
T 2ks9_A 307 CLNDRFRL 314 (364)
T ss_dssp HHCHHHHH
T ss_pred HHhHHHHH
Confidence 99999995
No 34
>4amj_A Beta-1 adrenergic receptor; membrane protein, 7TMR BETA1-adrenoceptor, stabilising mutat biased agonist; HET: CVD 2CV; 2.30A {Meleagris gallopavo} PDB: 2y01_A* 2y02_A* 2y03_A* 2y04_A* 4ami_A* 2y00_A* 2vt4_A* 2ycw_A* 2ycx_A* 2ycy_A* 2ycz_A*
Probab=99.79 E-value=1.3e-18 Score=174.14 Aligned_cols=169 Identities=34% Similarity=0.623 Sum_probs=121.2
Q ss_pred CCcccccceeeeehhhHHHHHHhhchhhhhhcccccCCcc------CCCCceecCCchhHhhhhhHHHHHhHHHHHHHHH
Q psy5093 419 LPMCMYPQYLVLISLCYYVTTLVLTAPAILWWRAVRNEEV------PKNKCPFTDSKGYLIFSSTISFYLPLLVMVFTYF 492 (662)
Q Consensus 419 y~~~~~~~~~~~~~~~~w~~~~~~~~p~~~~~~~~~~~~~------~~~~C~~~~~~~y~~~~~~~~f~lP~~ii~~~Y~ 492 (662)
|+..+++++...++++.|+.+++...|+.+........+. ....|.......|.....++.+++|+++++++|.
T Consensus 119 ~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~ip~~ii~~~y~ 198 (315)
T 4amj_A 119 YQSLMTRARAKVIICTVWAISALVSFLPIMMHWWRDEDPQALKCYQDPGCCDFVTNRAYAIASSIISFYIPLLIMIFVAL 198 (315)
T ss_dssp HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCSHHHHHHHHCTTCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHH
T ss_pred cccccchhhHHHhhhHHHHHHHHHHHHHHHHHhccccCCCccccccccccchhhcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445667778888999999999988877765433221110 1112233456678888888889999999999999
Q ss_pred HHHHHHHHhhhccccCcccccCCCCCCcccccccccCCCCCCCCCcccCCCCCCccccccccCCCCcccccCCccccccc
Q psy5093 493 KIYRAAVVQTKSLKVGTKQVMSGSTSGEKELTLRIHRGGTDHRHMTLHHTPSDDVEMDNVMSGHNGITRQVSNTRIIHKG 572 (662)
Q Consensus 493 ~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 572 (662)
+|++.++++.++....+..
T Consensus 199 ~i~~~~~~~~~~~~~~~~~------------------------------------------------------------- 217 (315)
T 4amj_A 199 RVYREAKEQIRKIDRASKR------------------------------------------------------------- 217 (315)
T ss_dssp HHHHHHHTC-----------------------------------------------------------------------
T ss_pred HHHHHHHHHHhccCccccc-------------------------------------------------------------
Confidence 9999998876543211100
Q ss_pred ccccccchhhhhhhhhhhhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhhcccccCCcchhHHHHHHHHHHHHhhhhhHHH
Q psy5093 573 HIVKNFSLSRKLSKFAKEKKAAKTLGIVMGVFIVCWLPFFVVNLLSAVCTKCFWSEQDEELISAVVTWLGWINSGMNPVI 652 (662)
Q Consensus 573 ~~~~~~~~~~~~~~~~~~~k~~~~~~~vv~~f~icw~P~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~iNPii 652 (662)
..++...++++|+++++++++++|++||+|+.+..++..+.+. ..+.....+..+++++||++||+|
T Consensus 218 --------~~~~~~~~~~~k~~~~~~~~~~~f~i~~~P~~i~~~~~~~~~~-----~~~~~~~~~~~~l~~~ns~~nPii 284 (315)
T 4amj_A 218 --------KTSRVMLMREHKALKTLGIIMGVFTLCWLPFFLVNIVNVFNRD-----LVPDWLFVAFNWLGYANSAMNPII 284 (315)
T ss_dssp ----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTT-----SSCHHHHHHHHHHHHHGGGTHHHH
T ss_pred --------ccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc-----cchHHHHHHHHHHHHHhccccHHH
Confidence 0111223478899999999999999999999999998876542 234567778889999999999999
Q ss_pred HHhccccccC
Q psy5093 653 YACWSRDFRR 662 (662)
Q Consensus 653 Y~~~~~~fR~ 662 (662)
|+ ++++||+
T Consensus 285 Y~-~~~~fR~ 293 (315)
T 4amj_A 285 YC-RSPDFRK 293 (315)
T ss_dssp GG-GSHHHHH
T ss_pred Hc-CcHHHHH
Confidence 99 9999995
No 35
>1u19_A Rhodopsin; G protein-coupled receptor, membrane protein, retinal protei photoreceptor, signaling protein; HET: MAN NAG BMA RET PLM HTO HTG; 2.20A {Bos taurus} SCOP: f.13.1.2 PDB: 1hzx_A* 1gzm_A* 1l9h_A* 2g87_A* 2hpy_A* 2i35_A* 2i36_A* 2i37_A* 2ped_A* 3oax_A* 3c9l_A* 1jfp_A* 1ln6_A* 1f88_A* 3cap_A* 3dqb_A* 3pqr_A* 3pxo_A* 3c9m_A* 2x72_A* ...
Probab=99.79 E-value=1.8e-18 Score=175.90 Aligned_cols=160 Identities=19% Similarity=0.378 Sum_probs=120.3
Q ss_pred cccceeeeehhhHHHHHHhhchhhhhhcccccCCccCCCCceec--------CCchhHhhhhhHHHHHhHHHHHHHHHHH
Q psy5093 423 MYPQYLVLISLCYYVTTLVLTAPAILWWRAVRNEEVPKNKCPFT--------DSKGYLIFSSTISFYLPLLVMVFTYFKI 494 (662)
Q Consensus 423 ~~~~~~~~~~~~~w~~~~~~~~p~~~~~~~~~~~~~~~~~C~~~--------~~~~y~~~~~~~~f~lP~~ii~~~Y~~I 494 (662)
+++++...++++.|+.+++..+|+++++...... .....|... ....|.+...++.+++|+++++++|.+|
T Consensus 149 ~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~-~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~ii~~~y~~i 227 (349)
T 1u19_A 149 FGENHAIMGVAFTWVMALACAAPPLVGWSRYIPE-GMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQL 227 (349)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHSGGGTTSSCCEEE-TTTTEEECCCSCCCGGGTHHHHHHHHHHHTTHHHHHHHHHHHTTT
T ss_pred eccchhHHHHHHHHHHHHHHHHHHHHheeeeecc-CCceeecccccCccccccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5667788889999999999999998877644222 234457432 2245667777788999999999999999
Q ss_pred HHHHHHhhhccccCcccccCCCCCCcccccccccCCCCCCCCCcccCCCCCCccccccccCCCCcccccCCccccccccc
Q psy5093 495 YRAAVVQTKSLKVGTKQVMSGSTSGEKELTLRIHRGGTDHRHMTLHHTPSDDVEMDNVMSGHNGITRQVSNTRIIHKGHI 574 (662)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 574 (662)
++.++++.++.+.
T Consensus 228 ~~~l~~~~~~~~~------------------------------------------------------------------- 240 (349)
T 1u19_A 228 VFTVKEAAAQQQE------------------------------------------------------------------- 240 (349)
T ss_dssp TTSSCSCCCSSCS-------------------------------------------------------------------
T ss_pred HHHHHHhhhhhcc-------------------------------------------------------------------
Confidence 9877654322110
Q ss_pred ccccchhhhhhhhhhhhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhhcccccCCcchhHHHHHHHHHHHHhhhhhHHHHH
Q psy5093 575 VKNFSLSRKLSKFAKEKKAAKTLGIVMGVFIVCWLPFFVVNLLSAVCTKCFWSEQDEELISAVVTWLGWINSGMNPVIYA 654 (662)
Q Consensus 575 ~~~~~~~~~~~~~~~~~k~~~~~~~vv~~f~icw~P~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~iNPiiY~ 654 (662)
..++.++++|+++++++++++|++||+|+.+..++..+.+.. .....+..+..+++++||++||+||+
T Consensus 241 --------~~~~~~~~~~~~~~~~~i~~~f~i~~~P~~i~~~~~~~~~~~----~~~~~~~~~~~~l~~~ns~~nPiiY~ 308 (349)
T 1u19_A 241 --------SATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGS----DFGPIFMTIPAFFAKTSAVYNPVIYI 308 (349)
T ss_dssp --------SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTS----CCCHHHHHHHHHHGGGGGTHHHHHHH
T ss_pred --------chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhheecCCc----ccchHHHHHHHHHHHHHHHHhHHHHH
Confidence 001124678899999999999999999999998887765431 23445667788999999999999999
Q ss_pred hccccccC
Q psy5093 655 CWSRDFRR 662 (662)
Q Consensus 655 ~~~~~fR~ 662 (662)
+++++||+
T Consensus 309 ~~~~~fR~ 316 (349)
T 1u19_A 309 MMNKQFRN 316 (349)
T ss_dssp HTCHHHHH
T ss_pred HHhHHHHH
Confidence 99999995
No 36
>4ea3_A Fusion protein of nociceptin receptor and cytochr; PSI-biology GPCR network, structural genomics, GPCR membrane 7TM NOP ORL1 cytochrome B562; HET: 0NN OLB OLA OLC; 3.01A {Homo sapiens}
Probab=99.77 E-value=7.7e-18 Score=176.51 Aligned_cols=165 Identities=20% Similarity=0.270 Sum_probs=119.4
Q ss_pred cCCcccccceeeeehhhHHHHHHhhchhhhhhcccccCCccCCCCceecC-------CchhHhhhhhHHHHHhHHHHHHH
Q psy5093 418 LLPMCMYPQYLVLISLCYYVTTLVLTAPAILWWRAVRNEEVPKNKCPFTD-------SKGYLIFSSTISFYLPLLVMVFT 490 (662)
Q Consensus 418 ~y~~~~~~~~~~~~~~~~w~~~~~~~~p~~~~~~~~~~~~~~~~~C~~~~-------~~~y~~~~~~~~f~lP~~ii~~~ 490 (662)
.|...++++++..++++.|+.+++..+|..+....... .....|.... ...|.+...++.+++|+++++++
T Consensus 231 ~~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~--~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~ip~~ii~~~ 308 (434)
T 4ea3_A 231 RALDVRTSSKAQAVNVAIWALASVVGVPVAIMGSAQVE--DEEIECLVEIPTPQDYWGPVFAICIFLFSFIVPVLVISVC 308 (434)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHHHHHHHEEECCC--SSCCCEEECCCSSHHHHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred ccccccchhhhHHhhhhhhhHHHHHHhhHheeeeeEee--cCceeEEEecCChHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46677788888899999999999999988775544322 2345674322 13366777788899999999999
Q ss_pred HHHHHHHHHHhhhccccCcccccCCCCCCcccccccccCCCCCCCCCcccCCCCCCccccccccCCCCcccccCCccccc
Q psy5093 491 YFKIYRAAVVQTKSLKVGTKQVMSGSTSGEKELTLRIHRGGTDHRHMTLHHTPSDDVEMDNVMSGHNGITRQVSNTRIIH 570 (662)
Q Consensus 491 Y~~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 570 (662)
|.+|++.++++.++.+
T Consensus 309 y~~I~~~l~~~~~~~~---------------------------------------------------------------- 324 (434)
T 4ea3_A 309 YSLMIRRLRGVRLLSG---------------------------------------------------------------- 324 (434)
T ss_dssp HHHHHHHHTTCSSCSS----------------------------------------------------------------
T ss_pred HHHHHHHHhhcccccc----------------------------------------------------------------
Confidence 9999988865432110
Q ss_pred ccccccccchhhhhhhhhhhhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhhcccccCCcchhHHHHHHHHHHHHhhhhhH
Q psy5093 571 KGHIVKNFSLSRKLSKFAKEKKAAKTLGIVMGVFIVCWLPFFVVNLLSAVCTKCFWSEQDEELISAVVTWLGWINSGMNP 650 (662)
Q Consensus 571 ~~~~~~~~~~~~~~~~~~~~~k~~~~~~~vv~~f~icw~P~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~iNP 650 (662)
..++.++++|+++++++++++|++||+|+.+..++..+.... ..........++.+++++||++||
T Consensus 325 ------------~~~~~~~~~~~~~~~~~vv~~F~i~w~P~~i~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~ns~lNP 390 (434)
T 4ea3_A 325 ------------SREKDRNLRRITRLVLVVVAVFVGCWTPVQVFVLAQGLGVQP--SSETAVAILRFCTALGYVNSCLNP 390 (434)
T ss_dssp ------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCC--CSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ------------chhhHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC--chHHHHHHHHHHHHHHHHHHHHHH
Confidence 011224678999999999999999999999999987765321 223334556677889999999999
Q ss_pred HHHHhccccccC
Q psy5093 651 VIYACWSRDFRR 662 (662)
Q Consensus 651 iiY~~~~~~fR~ 662 (662)
+||++++++||+
T Consensus 391 iIY~~~~~~fR~ 402 (434)
T 4ea3_A 391 ILYAFLDENFKA 402 (434)
T ss_dssp HHHHHHCHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999999985
No 37
>2koe_A Human cannabinoid receptor 1 - helix 7/8 peptide; GPCR, HCB1, membrane protein, signaling protein; NMR {Homo sapiens}
Probab=98.50 E-value=5.4e-08 Score=62.46 Aligned_cols=37 Identities=32% Similarity=0.425 Sum_probs=33.2
Q ss_pred HHHHHHHHHhhccccchhhhhcChhHHHHHHHhcccC
Q psy5093 376 SAVVTWLGWINSGMNPVIYACWSRDFRSKEKILNHKI 412 (662)
Q Consensus 376 ~~~~~~l~~~ns~~nP~IY~~~~~~fR~~~~~l~~~~ 412 (662)
..++.+++++|+++||+||++.+++||++++++++++
T Consensus 3 ~~~~~~l~~~ns~lNPiIY~~~~~~fr~~~~~~~~~~ 39 (40)
T 2koe_A 3 FAFASMLCLLNSTVNPIIYALRSKDLRHAFRSMFPSA 39 (40)
T ss_dssp HHHHHHHHHHHHHSSTTTTBTTBHHHHHHHTTTCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHhhhc
Confidence 4577889999999999999999999999999988664
No 38
>2koe_A Human cannabinoid receptor 1 - helix 7/8 peptide; GPCR, HCB1, membrane protein, signaling protein; NMR {Homo sapiens}
Probab=98.30 E-value=7e-08 Score=61.91 Aligned_cols=29 Identities=41% Similarity=0.650 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHhhhhhHHHHHhccccccC
Q psy5093 634 ISAVVTWLGWINSGMNPVIYACWSRDFRR 662 (662)
Q Consensus 634 ~~~~~~~l~~~ns~iNPiiY~~~~~~fR~ 662 (662)
++.++.+++++||++||+||++++++||+
T Consensus 2 ~~~~~~~l~~~ns~lNPiIY~~~~~~fr~ 30 (40)
T 2koe_A 2 VFAFASMLCLLNSTVNPIIYALRSKDLRH 30 (40)
T ss_dssp HHHHHHHHHHHHHHSSTTTTBTTBHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccHHHHH
Confidence 34578899999999999999999999985
No 39
>2ki9_A Cannabinoid receptor 2; GPCR, G-protein coupled receptor, membrane protein; NMR {Synthetic}
Probab=98.29 E-value=4.8e-08 Score=59.29 Aligned_cols=30 Identities=37% Similarity=0.855 Sum_probs=26.0
Q ss_pred hhHHHHHHHHHHHHHHHhhhhHHHHHHHHH
Q psy5093 590 EKKAAKTLGIVMGVFIVCWLPFFVVNLLSA 619 (662)
Q Consensus 590 ~~k~~~~~~~vv~~f~icw~P~~i~~l~~~ 619 (662)
|+|++|++++++++|++||+||++..++..
T Consensus 1 e~k~~k~l~~vv~~F~icW~P~~i~~~~~~ 30 (33)
T 2ki9_A 1 DVRLAKTLGLVLAVLLICWFPVLALMAHSL 30 (33)
T ss_dssp CCSSSSHHHHHHHHHTTTSSHHHHHHTTTT
T ss_pred CchhhhhHHHHHHHHHHHHhHHHHHHHHHH
Confidence 457899999999999999999999887643
No 40
>1hll_A Alpha-2A adrenergic receptor; helix-linker-helix, membrane protein; NMR {Synthetic} SCOP: j.94.1.1 PDB: 1hof_A 1ho9_A 1hod_A
Probab=98.14 E-value=4e-07 Score=54.97 Aligned_cols=30 Identities=50% Similarity=1.011 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHHhhhhcCCCCCCccccch
Q psy5093 138 ASILNLCVISLDRYWAITDPLTYPSRMSTR 167 (662)
Q Consensus 138 ~s~~~l~~iaidRy~~I~~P~~y~~~~t~~ 167 (662)
+|.+++++|++|||++|++|++|...++++
T Consensus 2 ~Si~~L~~is~dRy~aI~~Pl~~~~~~t~~ 31 (32)
T 1hll_A 2 SSIVHLCAISLDRYWSITQAIEYNLKRTPR 31 (32)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHGGGSSCCCC
T ss_pred cHHHHHHHHHHHHHHHhhhhhhcccccCCC
Confidence 588999999999999999999998877765
No 41
>2ki9_A Cannabinoid receptor 2; GPCR, G-protein coupled receptor, membrane protein; NMR {Synthetic}
Probab=97.56 E-value=1.5e-05 Score=48.12 Aligned_cols=29 Identities=38% Similarity=0.898 Sum_probs=25.3
Q ss_pred hhhhHHHHHHHHHHHHhhhhhHHHHHHHH
Q psy5093 331 EKKAAKTLGIVMGVFIVCWLPFFVVNLLS 359 (662)
Q Consensus 331 ~~~~~~~l~~i~~~f~i~~~P~~i~~~~~ 359 (662)
|+|++|++.++++.|++||+||.+..++.
T Consensus 1 e~k~~k~l~~vv~~F~icW~P~~i~~~~~ 29 (33)
T 2ki9_A 1 DVRLAKTLGLVLAVLLICWFPVLALMAHS 29 (33)
T ss_dssp CCSSSSHHHHHHHHHTTTSSHHHHHHTTT
T ss_pred CchhhhhHHHHHHHHHHHHhHHHHHHHHH
Confidence 46789999999999999999999877653
No 42
>2lot_A Apelin receptor; membrane protein; NMR {Homo sapiens} PDB: 2lou_A 2lov_A 2low_A
Probab=96.11 E-value=0.0004 Score=48.26 Aligned_cols=29 Identities=31% Similarity=0.414 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHHHHhhHhhhhheecccc
Q psy5093 53 LLVSTLSLFSLVTVFGNALVMIAVVRERY 81 (662)
Q Consensus 53 i~~~~~~ii~i~gl~gN~~vi~~i~~~~~ 81 (662)
++.++|.+++++|++||+++++++.++|.
T Consensus 30 ~lp~~Y~lvFvlGl~GN~lvl~v~~~~~~ 58 (64)
T 2lot_A 30 LIPAIYMLVFLLGTTGNGLVLWTVFRKKG 58 (64)
T ss_dssp SSHHHHHHTTTTTTTSSSSHHHHHHHHSS
T ss_pred HHHHHHHHHHHHHHhhhhhheeeeeEecc
Confidence 77889999999999999999999888764
No 43
>2ket_A Cathelicidin-6; antimicrobial peptide, antibiotic, antimicrobial, fungicide, pyrrolidone carboxylic acid, secreted; NMR {Bos taurus}
Probab=81.11 E-value=0.52 Score=24.43 Aligned_cols=18 Identities=50% Similarity=0.711 Sum_probs=15.6
Q ss_pred hhHHHHHHHhcccCCccc
Q psy5093 399 RDFRSKEKILNHKISPVV 416 (662)
Q Consensus 399 ~~fR~~~~~l~~~~~~~~ 416 (662)
++||+.++++|++.++.-
T Consensus 4 krfrkkfkklfkklspvi 21 (27)
T 2ket_A 4 KRFRKKFKKLFKKLSPVI 21 (27)
T ss_dssp HHHHHHHHHHHHHHSCSC
T ss_pred HHHHHHHHHHHHhcCccc
Confidence 689999999999988764
No 44
>2rdd_B UPF0092 membrane protein YAJC; drug resistance, multidrug efflux, transporter, antiporter, novel transmembrane helix, ACRB, inner membrane; HET: AIC; 3.50A {Escherichia coli}
Probab=27.96 E-value=54 Score=19.59 Aligned_cols=24 Identities=38% Similarity=0.538 Sum_probs=13.6
Q ss_pred HHhHHHH-HHHHHHHHHHHHHhhhc
Q psy5093 481 YLPLLVM-VFTYFKIYRAAVVQTKS 504 (662)
Q Consensus 481 ~lP~~ii-~~~Y~~I~~~~~~~~~~ 504 (662)
++|++++ ++.|..+.+-=+|+.+.
T Consensus 6 ~l~~v~~~~ifYFl~iRPQ~Kr~K~ 30 (37)
T 2rdd_B 6 ILMLVVFGLIFYFMILRPQQKRTKE 30 (37)
T ss_dssp HHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 4455544 66777666655554443
Done!