RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy5097
         (246 letters)



>d1euvb_ d.15.1.1 (B:) SUMO-1 (smt3 homologue) {Baker's yeast
          (Saccharomyces cerevisiae), smt3 [TaxId: 4932]}
          Length = 79

 Score = 24.8 bits (54), Expect = 4.3
 Identities = 6/18 (33%), Positives = 9/18 (50%)

Query: 53 KEHIKVKVKQDGKGLGFK 70
          + HI +KV      + FK
Sbjct: 2  ETHINLKVSDGSSEIFFK 19


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.303    0.123    0.337 

Gapped
Lambda     K      H
   0.267   0.0540    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 834,770
Number of extensions: 36924
Number of successful extensions: 86
Number of sequences better than 10.0: 1
Number of HSP's gapped: 86
Number of HSP's successfully gapped: 11
Length of query: 246
Length of database: 2,407,596
Length adjustment: 83
Effective length of query: 163
Effective length of database: 1,268,006
Effective search space: 206684978
Effective search space used: 206684978
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.8 bits)
S2: 52 (24.2 bits)