Diaphorina citri psyllid: psy50

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-----
MESDEFKTIRDEAQTGALGTDHQVFVIQPFIKWGKKMKRNTTRDFMLAESKALVKFSDNSQDDLEESDEFKTIRDEAQTGALGTDHQVFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGFLDSKRMVLMEREQKLKKALNKLKGQREMMRNKKQRQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIREDDTSAEHLLLDVVMTDVIMNKFKHEFISSRKRG
cccHHHHHHHHccccccccccccEEEEcccccccccccccccHHHHHHHHccccccccccccccHHHHHHHHHHHHHcccccccccEEEEEEEEEEccccccccccHHHHHHHHHHHHHHHcccEEEEEEEEEccccccccEECcccHHHHHHHHHcccccEEEEEEcccccHHHHHHHHHHccccEECcHHHHHHHHHccccccHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEccccccHHHHHHHHcccccccccccccccccccccccccccccEEEEEccccccccccccHHHHHHHcHHHHHcccEEEEEEccccccHHHHHHHHHHHHHHccccccccccEEEEEEccccccccccccccccEEEEEcccccHHHHHHHHHHHHHHcccEEEEEEEccccccHHHHHHHcccEEEEECccccccEEEEEEEEcHHHHHHHHHHHHHccccc
****************ALGTDHQVFVIQPFIKWGKKMK**TTRDFMLAES*****************************GALGTDHQVFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDA********FLDSKRMVLMEREQKLKKALN*****************FPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIREDDTSAEHLLLDVVMTDVIMNKFKHEFI******
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MESDEFKTIRDEAQTGALGTDHQVFVIQPFIKWGKKMKRNTTRDFMLAESKALVKFSDNSQDDLEESDEFKTIRDEAQTGALGTDHQVFVVQPFIKWGKKMKRNTTRDFMLAESKALVSSIQGWRVVDSTIISLLSFDKKSFFGKGNLELLKRQVRGDARVTAVFVSVDVLKLHQQKMLQDLFQVPVFDRYMIVIQIFKAHAKTREARLQIAIAELPYLWTRYRTIEDATNMNITKGFLDSKRMVxxxxxxxxxxxxxxxxxxxxxxxxxxxxQKFPTVAVVGYTNCGKTTLIKALTDDDSLVPRNQLFATLDVTTHEGMLPNRLRILYVDTIGFISNIPTTLLEPFKVTLEDAMLADIIIHVVDVSNPDYLQQKQHVDETLQHLELEEKILEHVLVVGNKVDAVPPGERVTEEYDLLISATRGTGLAQLKEKVQDMILKATGRKNITMRVRSGGSEYQWLMKHTAVSNIREDDTSAEHLLLDVVMTDVIMNKFKHEFISSRKRG

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Putative GTP-binding protein 6 confidentQ3U6U5
Putative GTP-binding protein 6 confidentO43824
GTPase HflX GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis.confidentA0L4B2

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0005525 [MF]GTP bindingprobableGO:0043168, GO:0003674, GO:0005488, GO:0019001, GO:0035639, GO:0097159, GO:1901363, GO:0043167, GO:0036094, GO:0032561, GO:0032553, GO:0001883, GO:0032549, GO:0032555, GO:0017076, GO:0000166, GO:0032550, GO:1901265, GO:0001882

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2QTF, chain A
Confidence level:very confident
Coverage over the Query: 107-226,241-262,276-299,312-440
View the alignment between query and template
View the model in PyMOL
Template: 3IEV, chain A
Confidence level:very confident
Coverage over the Query: 275-438,456-501
View the alignment between query and template
View the model in PyMOL