Query psy5102
Match_columns 357
No_of_seqs 159 out of 1342
Neff 7.7
Searched_HMMs 46136
Date Fri Aug 16 17:21:33 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5102.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/5102hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 cd02044 ov-serpin ovalbumin fa 100.0 3.2E-59 6.9E-64 457.7 29.0 294 14-308 3-370 (370)
2 cd02057 maspin_like Maspin (ma 100.0 1.6E-58 3.5E-63 452.9 27.2 294 13-308 2-372 (372)
3 cd02048 neuroserpin Neuroserpi 100.0 1.4E-58 2.9E-63 455.8 26.2 295 14-310 2-377 (388)
4 cd02054 angiotensinogen Angiot 100.0 1E-57 2.2E-62 446.9 31.6 290 12-308 2-372 (372)
5 COG4826 Serine protease inhibi 100.0 1.2E-58 2.6E-63 423.3 21.1 299 10-310 36-408 (410)
6 cd02051 PAI-1_nexin-1 Plasmino 100.0 1.3E-57 2.8E-62 447.3 30.1 298 10-308 5-377 (377)
7 KOG2392|consensus 100.0 9.5E-58 2.1E-62 447.2 28.6 299 9-308 4-380 (380)
8 cd02059 ovalbumin_like The ova 100.0 1.3E-57 2.9E-62 449.0 29.8 295 13-308 2-389 (389)
9 cd02058 PAI-2 Plasminogen Acti 100.0 9.6E-58 2.1E-62 448.7 26.8 295 13-308 2-380 (380)
10 cd02046 hsp47 Heat shock prote 100.0 4.3E-57 9.3E-62 441.7 28.0 291 12-305 3-366 (366)
11 cd02047 HCII Heparin cofactor 100.0 8.8E-57 1.9E-61 447.6 30.6 295 10-309 63-436 (436)
12 cd02045 antithrombin-III_like 100.0 3.7E-57 8E-62 444.5 27.2 295 11-305 4-381 (381)
13 cd02052 PEDF Pigment epitheliu 100.0 8.9E-57 1.9E-61 440.7 29.1 293 9-308 12-374 (374)
14 PHA02948 serine protease inhib 100.0 1.5E-56 3.2E-61 438.2 28.9 292 12-308 17-373 (373)
15 cd02056 alpha-1-antitrypsin_li 100.0 1.4E-56 3E-61 437.7 28.0 285 15-305 1-361 (361)
16 PF00079 Serpin: Serpin (serin 100.0 4.1E-56 8.9E-61 435.0 31.1 293 14-308 1-371 (371)
17 cd00172 SERPIN SERine Proteina 100.0 2.7E-56 5.8E-61 435.9 29.8 288 16-305 2-364 (364)
18 smart00093 SERPIN SERine Prot 100.0 2.6E-56 5.7E-61 435.4 27.7 282 21-308 1-359 (359)
19 cd02049 bacterial_SERPIN SERin 100.0 7.9E-56 1.7E-60 432.8 28.6 289 13-305 2-364 (364)
20 cd02055 PZI Protein Z-dependen 100.0 4.2E-56 9.2E-61 434.6 25.7 288 12-305 2-365 (365)
21 cd02053 alpha2AP Alpha2-antipl 100.0 5.8E-55 1.3E-59 424.6 26.4 283 13-305 2-351 (351)
22 cd02050 C1_inh C1 inhibitor (C 100.0 5.8E-55 1.3E-59 424.8 25.7 284 15-305 1-352 (352)
23 cd02043 plant_SERPIN SERine Pr 100.0 1.7E-54 3.8E-59 425.7 28.7 293 15-308 2-381 (381)
24 PHA02660 serpin-like protein; 100.0 3.1E-51 6.8E-56 399.6 22.7 287 9-308 8-364 (364)
25 PF07037 DUF1323: Putative tra 25.8 1E+02 0.0022 25.4 3.7 28 99-127 17-46 (122)
26 PF12415 rpo132: Poxvirus DNA 24.4 21 0.00047 22.3 -0.3 22 334-355 7-28 (33)
No 1
>cd02044 ov-serpin ovalbumin family of serpins (ov-serpins). Family of closely related proteins, whose members can be secreted (ovalbumin), cytosolic (leukocyte elastase inhibitor, LEI), or targeted to both compartments (plasminogen activator inhibitor 2, PAI-2). This subgroup corresponds to clade B of the serpin superfamily. In general, serpins exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants can cause blood clotting disorders, emphysema, cirrhosis, and dementia.
Probab=100.00 E-value=3.2e-59 Score=457.68 Aligned_cols=294 Identities=24% Similarity=0.454 Sum_probs=261.1
Q ss_pred HHhhHHHHHHHHHHHhccCCCCCEEEchhhHHHHHHHHHcCCCchhHHHHHHhhCCCch-------hhHHhhc---c-cc
Q psy5102 14 RGITQMTLDMERAIRSVMTKNQNVVFAPLSIVGALALVLLGSDGQTKDELTHFMGVATG-------RSLSNKL---T-AH 82 (357)
Q Consensus 14 ~~~~~Fa~~l~~~l~~~~~~~~N~v~SP~si~~aL~~l~~Ga~g~T~~eL~~~Lg~~~~-------~~ll~~l---~-~~ 82 (357)
.++++||++||+++... .+++|+|+||+||+.+|+|++.||+|+|++||.++||++.. +++++.+ + +.
T Consensus 3 ~~~~~F~~~l~~~~~~~-~~~~N~v~SP~si~~aL~~l~~Ga~g~T~~el~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (370)
T cd02044 3 LANSAFAVDVFKELSKK-SALQNVFFSPIAIMSSLAMVYLGAKGSTANQIGKVLHFDNVKDVHSSFQTLLSDINKLNSFY 81 (370)
T ss_pred chhhHHHHHHHHHHhhc-CCCCcEEECHHHHHHHHHHHhhhcCCcHHHHHHHHhCCCCHHHHHHHHHHHHHHHhcCCCCc
Confidence 46789999999999876 67899999999999999999999999999999999999762 3444444 2 44
Q ss_pred eeeee---eccc---------------------cCCH----HHH---HHHHH---hCCC-cccCCCCCCCccceeEeecc
Q psy5102 83 SLRRG---ITQM---------------------TLDM----ERA---IRSVM---TKNQ-NVVFAPLSIVGALALVLLGS 127 (357)
Q Consensus 83 ~l~~a---f~~~---------------------~~dF----~~a---IN~wv---T~g~-~~~l~~~~l~~~t~lvLvna 127 (357)
.++.+ |+++ .+|| +.+ ||+|| |+|+ ++++++.+++++++++|+||
T Consensus 82 ~l~~a~~~~~~~~~~l~~~f~~~~~~~~~~~~~~vdF~~~~~~a~~~IN~wv~~~T~g~I~~lv~~~~l~~~t~lvlvna 161 (370)
T cd02044 82 SLKLVNRLYGEKRYNFLPEFLSSTKKPYAKELETVDFKDKAEETRGQINSWIKDQTKGKIENLLPENSVDSQTAMVVVNA 161 (370)
T ss_pred eEeeeeehhhcCCCcccHHHHHHHHHhhccceEeccccCCHHHHHHHHHHHHHHhcCCchhhcCCCCCCCcchhheeeee
Confidence 56655 5554 5788 233 99999 9999 99999888999999999999
Q ss_pred -------cCCCCCCCceeeeeeec--------------c-cccccCCCCeEEEe--ecCCeEEEEEEec-CCCChhHHhh
Q psy5102 128 -------DGQTKDELTHFMGVATG--------------R-SLSNNPEAYASFLE--KMRNEVYMYFILP-KNPDLSEFTK 182 (357)
Q Consensus 128 -------~~~F~~~~T~~~~F~~~--------------~-~~~~~~~~~~~vve--y~~~~~sm~iiLP-~~~~L~~l~~ 182 (357)
++||++..|..++||.. . +|++.+++++++|+ |++++++|+|||| +..+|.++++
T Consensus 162 i~Fkg~W~~~F~~~~T~~~~F~~~~~~~~~V~mM~~~~~~~~~~~~~~~~~vv~LPy~~~~~sm~iiLP~~~~~l~~l~~ 241 (370)
T cd02044 162 AYFKGKWMKKFSEEETKESPFRVNKTETKPVQMMYMEATFNMGNIESLKMKILELPFANKDLSMFILLPDEVTGLEKLES 241 (370)
T ss_pred eeEcccccCCCChhhCccCcCCcCCCcEEEeeCccccCceeeEEcCCCCeEEEEcccCCCceEEEEEcCCCCCcHHHHHH
Confidence 89999999999999975 2 56677889999999 9988999999999 8899999999
Q ss_pred ccChhHHHHHHH--hcCceeEEEEeceeeEeeccchHHHhhhCCccccCCCCCCCCCCCCCCCCceeeeeeEEEEEEEcc
Q psy5102 183 DLDYDKFSRIIE--STNKVDVIYTIPKMKVTSSTELRTVLNTMNVTSMFDVSKSDLSNMLDDRGVAVDQVFHKVDIEVTE 260 (357)
Q Consensus 183 ~L~~~~l~~~~~--~l~~~~v~l~lPkF~i~~~~dL~~~L~~lGl~~~F~~~~adfs~is~~~~l~vs~v~qk~~iev~E 260 (357)
.|+.+.+..|.. +++.+.|+|+||||++++++||+++|++||++.+|++..|||++|+++.+++|++|+|++.|+|||
T Consensus 242 ~l~~~~l~~~~~~~~~~~~~v~l~lPkF~i~~~~~l~~~L~~mGl~~~F~~~~Adfs~ms~~~~l~vs~v~qka~ievdE 321 (370)
T cd02044 242 EINYEKLNKWTSPSTMAEAKVKVYLPRFKMEKMYDLKSVLESLGMKDAFSEGRANFSGMSETKGLALSNVIHKASLEINE 321 (370)
T ss_pred HhCHHHHHHhhccccceeeEEEEEeeEEEEeeEEccHHHHHHcCchhhCCCCCCChhhcCCCCCeeEeeeeEeeEEEECC
Confidence 999999999974 677889999999999999999999999999999999756999999976689999999999999999
Q ss_pred Cccccccccceeee-ecCCCEEEEcCceEEEEEECCCCcEEEEEEEcCC
Q psy5102 261 QGTVAAASTGIIIT-RISKPTVKINRPFIFFIYHKPTDSIVFWGSIYKP 308 (357)
Q Consensus 261 ~G~~aaa~t~~~~~-~s~~~~f~~nrPFlf~I~d~~t~~iLF~G~v~~P 308 (357)
+|++|+|+|...+. ++.+.+|++||||+|+|+|+.||.|||+|+|.+|
T Consensus 322 ~Gt~aaa~t~~~~~~~~~~~~f~~drPF~f~I~~~~t~~iLF~G~v~~P 370 (370)
T cd02044 322 DGTEAAEVTGAVMLQRSVKEEFNADHPFLFIIRHNKTNCILFFGKFSSP 370 (370)
T ss_pred CccccccccceeeeccCCCCeEEeeCCEEEEEEECCCCeEEEEEEecCC
Confidence 99999999987555 5556789999999999999999999999999998
No 2
>cd02057 maspin_like Maspin (mammary serine proteinase inhibitor), a member of the serpin superfamily, with a multitude of effects on cells and tissues at an assortment of developmental stages. Maspin has tumor suppressing activity against breast and prostate cancer. In general, SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones.
Probab=100.00 E-value=1.6e-58 Score=452.91 Aligned_cols=294 Identities=24% Similarity=0.408 Sum_probs=255.6
Q ss_pred HHHhhHHHHHHHHHHHhccCCCCCEEEchhhHHHHHHHHHcCCCchhHHHHHHhhCCCch-------hhHHhhc---c-c
Q psy5102 13 RRGITQMTLDMERAIRSVMTKNQNVVFAPLSIVGALALVLLGSDGQTKDELTHFMGVATG-------RSLSNKL---T-A 81 (357)
Q Consensus 13 ~~~~~~Fa~~l~~~l~~~~~~~~N~v~SP~si~~aL~~l~~Ga~g~T~~eL~~~Lg~~~~-------~~ll~~l---~-~ 81 (357)
..++++||++||+.+... ++++|+|+||+||+.+|+|++.||+|+|++||.++||++.. +.+...+ . +
T Consensus 2 ~~~~~~F~~~l~~~~~~~-~~~~Nvv~SP~si~~aL~ml~~Ga~g~T~~el~~~L~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (372)
T cd02057 2 QLANTAFAVDLFKKLCEK-EPTGNVVFSPICLSTSLALAQVGAKGDTANEIGKVLHFENVKDVPFGFQTVTSDVSKLSSF 80 (372)
T ss_pred cchhhHHHHHHHHHHhcc-CCCCcEEECHHHHHHHHHHHHhhcCCcHHHHHHHHhCCCChhHHHHHHHHHHHHHhcCCcc
Confidence 357899999999999876 67899999999999999999999999999999999999761 2333333 1 2
Q ss_pred ceeeee---eccc---------------------cCCH----HHH---HHHHH---hCCC-cccCCCCCCCccceeEeec
Q psy5102 82 HSLRRG---ITQM---------------------TLDM----ERA---IRSVM---TKNQ-NVVFAPLSIVGALALVLLG 126 (357)
Q Consensus 82 ~~l~~a---f~~~---------------------~~dF----~~a---IN~wv---T~g~-~~~l~~~~l~~~t~lvLvn 126 (357)
+.++++ |+++ .+|| +.+ ||+|| |+|+ ++++++++++++|+++|+|
T Consensus 81 ~~l~~an~l~v~~~~~~~~~f~~~~~~~y~~~~~~vdF~~~~~~a~~~IN~wv~~~T~g~I~~l~~~~~i~~~t~l~lvN 160 (372)
T cd02057 81 YSLKLIKRLYVDKSLNLSTDFINSTKRPYPKELETVDFKDKLEETRGQINNSIKELTDGHFENILNENSVNDQTKILVVN 160 (372)
T ss_pred chhHhhhhhhhhCCCCccHHHHHHHHHHhcCeeEEecCCCCHHHHHHHHHHHHHHhccChhhhcCCCCCCCCCCceeeee
Confidence 334444 4443 5788 233 99999 9999 9999988899999999999
Q ss_pred c-------cCCCCCCCceeeeeeec--------------c-cccccCCCCeEEEe--ecCCeEEEEEEec-C----CCCh
Q psy5102 127 S-------DGQTKDELTHFMGVATG--------------R-SLSNNPEAYASFLE--KMRNEVYMYFILP-K----NPDL 177 (357)
Q Consensus 127 a-------~~~F~~~~T~~~~F~~~--------------~-~~~~~~~~~~~vve--y~~~~~sm~iiLP-~----~~~L 177 (357)
| ++||+++.|.+++||.. . +|+|.++++|++|+ |++++++|+|||| + ..+|
T Consensus 161 a~yFkg~W~~~F~~~~T~~~~F~~~~~~~~~V~mM~~~~~~~~~~~~~~~~~vv~LPy~~~~~sm~iiLP~~~~~~~~~L 240 (372)
T cd02057 161 AAYFVGNWMKKFPESETKECPFRVNKTETKPVQMMNLEATFSMGYIDELNTKILELPFQNKHLSMLILLPKDIEDESTGL 240 (372)
T ss_pred hheeccccCCCCCccccccCCCEECCCceEeeEhhheeceEEeEEeCCcCceEEEeecCCCCEEEEEEecCccccccccH
Confidence 9 89999999999999986 1 56788999999999 9988999999999 5 4689
Q ss_pred hHHhhccChhHHHHHHH--hcCceeEEEEeceeeEeeccchHHHhhhCCccccCCCCCCCCCCCCCCCCceeeeeeEEEE
Q psy5102 178 SEFTKDLDYDKFSRIIE--STNKVDVIYTIPKMKVTSSTELRTVLNTMNVTSMFDVSKSDLSNMLDDRGVAVDQVFHKVD 255 (357)
Q Consensus 178 ~~l~~~L~~~~l~~~~~--~l~~~~v~l~lPkF~i~~~~dL~~~L~~lGl~~~F~~~~adfs~is~~~~l~vs~v~qk~~ 255 (357)
.++++.|+.+.+..|.. .++.+.|+|+||||+++.++||+++|++||++++|+...|||++|+++++++|++|+|++.
T Consensus 241 ~~l~~~l~~~~l~~~~~~~~~~~~~v~l~lPKF~i~~~~~l~~~L~~lGi~~~F~~~~adfs~i~~~~~l~vs~v~hk~~ 320 (372)
T cd02057 241 EKLEKQLTSESLSQWTNPSMMANAKVKVSLPKFKVEKMIDLKAMLESLGLKHIFNEDASDFSGMSETKGVALSNVIHKVC 320 (372)
T ss_pred HHHHHhcChhHHHHhhchhcceeEEEEEECCcEEEEEEechHHHHHHcCChhhcCCcccccccccCCCceEEEeeeeeeE
Confidence 99999999999999963 4677899999999999999999999999999999997569999999876799999999999
Q ss_pred EEEccCccccccccceeeeecCCCEEEEcCceEEEEEECCCCcEEEEEEEcCC
Q psy5102 256 IEVTEQGTVAAASTGIIITRISKPTVKINRPFIFFIYHKPTDSIVFWGSIYKP 308 (357)
Q Consensus 256 iev~E~G~~aaa~t~~~~~~s~~~~f~~nrPFlf~I~d~~t~~iLF~G~v~~P 308 (357)
|||||+|++|+++|..... ..+..|++||||+|+|+|+.++.|||+|+|.+|
T Consensus 321 ieVdE~Gt~a~a~t~~~~~-~~~~~f~~nrPF~f~I~d~~t~~iLF~G~v~~p 372 (372)
T cd02057 321 LEVNEDGGESIEVPGARIL-QHKDEFNADHPFIFIIRHNKTRNIIFFGRFCSP 372 (372)
T ss_pred EEECCCCeecchhcceecc-CCCCeEEeeCCEEEEEEECCCCeEEEEEEecCC
Confidence 9999999999999875332 234689999999999999999999999999998
No 3
>cd02048 neuroserpin Neuroserpin is a inhibitory member of the SERine Proteinase INhibitor (serpin) family that reacts preferentially with tissue-type plasminogen activator (tPA). It is located in neurons in regions of the brain where tPA is also found, suggesting that neuroserpin is the selective inhibitor of tPA in the central nervous system (CNS). This subgroup corresponds to clade I of the serpin superfamily.
Probab=100.00 E-value=1.4e-58 Score=455.83 Aligned_cols=295 Identities=28% Similarity=0.456 Sum_probs=258.6
Q ss_pred HHhhHHHHHHHHHHHhccCCCCCEEEchhhHHHHHHHHHcCCCchhHHHHHHhhCCCch---------hhHHhhc---c-
Q psy5102 14 RGITQMTLDMERAIRSVMTKNQNVVFAPLSIVGALALVLLGSDGQTKDELTHFMGVATG---------RSLSNKL---T- 80 (357)
Q Consensus 14 ~~~~~Fa~~l~~~l~~~~~~~~N~v~SP~si~~aL~~l~~Ga~g~T~~eL~~~Lg~~~~---------~~ll~~l---~- 80 (357)
++.++||++||+++... ++++|+|+||+||+.+|+||+.||+|+|++||.++||++.. +++...+ .
T Consensus 2 ~~~~~Fa~~l~~~~~~~-~~~~N~v~SP~si~~aL~~l~~Ga~g~T~~el~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (388)
T cd02048 2 EAIAELSVDLYNALRAS-KEDENIIFSPLSTALALGMVELGAKGSALKEIRHSLGYDGLKNGEEFSFLKDLSSMITAKEK 80 (388)
T ss_pred chhhHHHHHHHHHhhcc-CCCCcEEEChHHHHHHHHHHhhhcCCcHHHHHHHHhCCCCCChHHHHHHHHHHHHHhccCCC
Confidence 57789999999999876 67899999999999999999999999999999999999761 2233333 1
Q ss_pred cceeeee---eccc---------------------cCCH---HHH---HHHHH---hCCC-cccCCCCCCCccceeEeec
Q psy5102 81 AHSLRRG---ITQM---------------------TLDM---ERA---IRSVM---TKNQ-NVVFAPLSIVGALALVLLG 126 (357)
Q Consensus 81 ~~~l~~a---f~~~---------------------~~dF---~~a---IN~wv---T~g~-~~~l~~~~l~~~t~lvLvn 126 (357)
+..++++ |+++ .+|| +.+ ||+|| |+|+ ++++++.+++++|+++|+|
T Consensus 81 ~~~l~~an~i~v~~~~~l~~~f~~~~~~~f~~~~~~vdF~~~~~~~~~IN~wv~~~T~g~I~~l~~~~~l~~~t~lvlvN 160 (388)
T cd02048 81 EYVFNLANSLYLQNGFHVKEKFLQSNKKYFNAAVKLVDFSQVKAVAEHINKWVENHTNNKIKDMFSSRDFTPLTRLVLVN 160 (388)
T ss_pred ccchHHhhhhHhhcCCCccHHHHHHHHHHhcCeeEEECCCChHHHHHHHHHHHHHhccCchhhcCCCccCCHHHHHHhhh
Confidence 3344444 4433 5788 233 99999 9999 9999988899999999999
Q ss_pred c-------cCCCCCCCceeeeeeec------------c---cccccCC------CCeEEEe--ecCCeEEEEEEec-CCC
Q psy5102 127 S-------DGQTKDELTHFMGVATG------------R---SLSNNPE------AYASFLE--KMRNEVYMYFILP-KNP 175 (357)
Q Consensus 127 a-------~~~F~~~~T~~~~F~~~------------~---~~~~~~~------~~~~vve--y~~~~~sm~iiLP-~~~ 175 (357)
| ++||++..|..++||.. . +|++.++ .+++||+ |++++++|+|||| +..
T Consensus 161 ai~Fkg~W~~~F~~~~T~~~~F~~~~g~~~~V~mM~~~~~~~y~~~~~~~~~~~~~~~vv~LPy~~~~~sm~iiLP~~~~ 240 (388)
T cd02048 161 ALYFKGNWKSQFRPENTRTFSFTKDDESEVQIPMMYQQGEFYYGEFSDGSNEAGGIYQVLELPYEGDEISLMIILSRQEV 240 (388)
T ss_pred eEEEeeeccCCCCHHHCeeccEEECCCceEEeehhcccCcEEEEeccccccccccCcEEEEEecCCCceEEEEEccCCCC
Confidence 9 89999999999999986 1 4445555 7799999 9998999999999 889
Q ss_pred ChhHHhhccChhHHHHHHHhcCceeEEEEeceeeEeeccchHHHhhhCCccccCCCCCCCCCCCCCCCCceeeeeeEEEE
Q psy5102 176 DLSEFTKDLDYDKFSRIIESTNKVDVIYTIPKMKVTSSTELRTVLNTMNVTSMFDVSKSDLSNMLDDRGVAVDQVFHKVD 255 (357)
Q Consensus 176 ~L~~l~~~L~~~~l~~~~~~l~~~~v~l~lPkF~i~~~~dL~~~L~~lGl~~~F~~~~adfs~is~~~~l~vs~v~qk~~ 255 (357)
+|.++++.|+...+..|.++++.+.|+|.||||++++++||+++|++||++++|+. .|||++|+++++++|++++|++.
T Consensus 241 ~l~~l~~~l~~~~l~~~~~~~~~~~v~l~lPkF~i~~~~~l~~~L~~lGi~~~F~~-~adfs~i~~~~~l~vs~v~hka~ 319 (388)
T cd02048 241 PLATLEPLVKAPLIEEWANSVKKQKVEVYLPRFKVEQKIDLKDVLKNLGITEIFSG-GADLSGISDSKELYVSKVFHKVF 319 (388)
T ss_pred CHHHHHHHhChHHHHHHHHhCceeEEEEEccEEEEEEEechHHHHHHcCCchhhcC-ccCcccccCCCCeEEEEEEeeeE
Confidence 99999999999999999999999999999999999999999999999999999997 79999999876899999999999
Q ss_pred EEEccCccccccccceeee-ec--CCCEEEEcCceEEEEEECCCCcEEEEEEEcCCCC
Q psy5102 256 IEVTEQGTVAAASTGIIIT-RI--SKPTVKINRPFIFFIYHKPTDSIVFWGSIYKPEP 310 (357)
Q Consensus 256 iev~E~G~~aaa~t~~~~~-~s--~~~~f~~nrPFlf~I~d~~t~~iLF~G~v~~P~~ 310 (357)
|+|||+|++|+|+|.+... ++ .+.+|++||||+|+|+|+.||.|||+|+|.+|+.
T Consensus 320 ieV~E~Gt~a~a~t~~~~~~~~~~~~~~f~~nrPF~f~I~d~~t~~iLF~G~v~~P~~ 377 (388)
T cd02048 320 LEVNEEGSEAAASSGMIAISRMAVLYPQVIVDHPFFFLIRNRRTGSILFMGRVMHPET 377 (388)
T ss_pred EEECCCcceehhhcccccccccCCCCceEEecCCEEEEEEECCCCeEEEEEEecCCCc
Confidence 9999999999999976543 33 3468999999999999999999999999999974
No 4
>cd02054 angiotensinogen Angiotensinogen is part of the renin-angiotensin system (RAS), which plays an important role in blood pressure regulation, renal haemodynamics, fluid and electrolyte homeostasis. It is also involved in normal and abnormal growth processes. The growth promoting actions of angiotensin have been shown in a variety of cells and tissues. This subgroup represents clade A8 of the serpin superfamily. In general, SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones.
Probab=100.00 E-value=1e-57 Score=446.89 Aligned_cols=290 Identities=21% Similarity=0.340 Sum_probs=247.7
Q ss_pred HHHHhhHHHHHHHHHHHhccCCCCCEEEchhhHHHHHHHHHcCCCchhHHHHHHhhCCCch------------hhH----
Q psy5102 12 LRRGITQMTLDMERAIRSVMTKNQNVVFAPLSIVGALALVLLGSDGQTKDELTHFMGVATG------------RSL---- 75 (357)
Q Consensus 12 ~~~~~~~Fa~~l~~~l~~~~~~~~N~v~SP~si~~aL~~l~~Ga~g~T~~eL~~~Lg~~~~------------~~l---- 75 (357)
+++++++||++||+.+... .+++|+|+||+||+.+|+|++.||+|+|++||.++||++.. +++
T Consensus 2 ~~~~~~~f~~~l~~~l~~~-~~~~N~v~SP~Si~~aL~ml~~GA~G~T~~el~~~L~~~~~~~~~~~~~~~~~~~~~~~~ 80 (372)
T cd02054 2 LAMLVNVLGLRMYGMLSEL-WVHTNTLLSPTSVFGTLASLYLGASKKTADSLQALLGLPWKSKNSDCTSRVDGHKVLSTL 80 (372)
T ss_pred hHHHHHHHHHHHHHHHHhh-CCCCCEEEChHHHHHHHHHHHcCCCccHHHHHHHHhCCCcccccccccccccHHHHHHHH
Confidence 5778999999999999876 67899999999999999999999999999999999999731 122
Q ss_pred ---Hhhc---c-cceeeee---eccc----------------------cCCH---HHH---HHHHH---hCCC-cccCCC
Q psy5102 76 ---SNKL---T-AHSLRRG---ITQM----------------------TLDM---ERA---IRSVM---TKNQ-NVVFAP 113 (357)
Q Consensus 76 ---l~~l---~-~~~l~~a---f~~~----------------------~~dF---~~a---IN~wv---T~g~-~~~l~~ 113 (357)
...+ + +..+..+ |+++ .+|| +.+ ||+|| |+|+ ++++++
T Consensus 81 ~~~~~~~~~~~~~~~l~~a~~i~~~~~~~l~~~f~~~~~~~y~a~~~~~vdF~~~~~a~~~IN~WV~~~T~g~I~~ll~~ 160 (372)
T cd02054 81 QAIQSLVDAQGRQLLLSTVVWTFTAPGIHLSQPFVQGLADFSDASFPRSVDFTEPDVAEEKINNFVQATSDGKVKSSLKG 160 (372)
T ss_pred HHHHHHHcCCCCccEEEEEEEEEecCCCCccHHHHHHHHHHhCcccceeecCCChHHHHHHHHHHHHHHhcCchhhhccC
Confidence 2222 1 2344444 4443 4688 333 99999 9999 999964
Q ss_pred CCCCccceeEeecc-------cCCCCCCCceeeeeeec------------c-cccccCCCCeEEEe--ecCCeEEEEEEe
Q psy5102 114 LSIVGALALVLLGS-------DGQTKDELTHFMGVATG------------R-SLSNNPEAYASFLE--KMRNEVYMYFIL 171 (357)
Q Consensus 114 ~~l~~~t~lvLvna-------~~~F~~~~T~~~~F~~~------------~-~~~~~~~~~~~vve--y~~~~~sm~iiL 171 (357)
++++|+++|+|| ++||++..|.+..|+.. . +|.+.++++++|++ |++ +++|+|||
T Consensus 161 --~~~~t~lvLvNaiyFkg~W~~~F~~~~T~~f~~~~~~~~~V~mM~~~~~~~y~~~~~~~~~vleLPy~~-~~sm~iiL 237 (372)
T cd02054 161 --LSPDSDLLFATSVHFQGNWKTASQLEEPQEFWVDNNTSVSVPMLSHTGTFKYLSDIQDNFSITQLPLSK-RACLLLVQ 237 (372)
T ss_pred --CCCCCeEEEEEEEEEEHhhcCCCCcccceeEEeCCCCEEEEeeeeccCcEEEEEecCCCcEEEEEeeCC-CeEEEEEe
Confidence 889999999999 89999999984333322 1 45556778999999 875 59999999
Q ss_pred c-CCCChhHHhhccChhHHHHHHHhcCceeEEEEeceeeEeeccchHHHhhhCCccccCCCCCCCCCCCCCCCCceeeee
Q psy5102 172 P-KNPDLSEFTKDLDYDKFSRIIESTNKVDVIYTIPKMKVTSSTELRTVLNTMNVTSMFDVSKSDLSNMLDDRGVAVDQV 250 (357)
Q Consensus 172 P-~~~~L~~l~~~L~~~~l~~~~~~l~~~~v~l~lPkF~i~~~~dL~~~L~~lGl~~~F~~~~adfs~is~~~~l~vs~v 250 (357)
| +..+|.++++.|+.+.+..|.++++.+.|+|+||||+++.++||+++|++||++++|+. .|||++|++ .+++|++|
T Consensus 238 P~~~~~l~~l~~~L~~~~l~~~~~~~~~~~v~v~lPkF~i~~~~~L~~~L~~lGi~~~F~~-~Adfs~i~~-~~l~vs~v 315 (372)
T cd02054 238 PHEGSDLDKVEGKLPQQNSSNWLKNLSPRTIELTLPKFSLQGSYDLQDLLAQMELPALLGS-EANLSKLSN-DRFTVGKV 315 (372)
T ss_pred CCCCCCHHHHHHhhCHHHHHHHHHhCCceEEEEECCeEEEEEEeccHHHHHHcCCcccccC-ccccccccC-CCceeeee
Confidence 9 88899999999999999999999999999999999999999999999999999999987 799999995 48999999
Q ss_pred eEEEEEEEccCccccccccceeeeecCCCEEEEcCceEEEEEECCCCcEEEEEEEcCC
Q psy5102 251 FHKVDIEVTEQGTVAAASTGIIITRISKPTVKINRPFIFFIYHKPTDSIVFWGSIYKP 308 (357)
Q Consensus 251 ~qk~~iev~E~G~~aaa~t~~~~~~s~~~~f~~nrPFlf~I~d~~t~~iLF~G~v~~P 308 (357)
+||+.|||||+|++|+|+|.+.. ...+.+|++||||+|+|+|+.||.|||+|+|.+|
T Consensus 316 ~hka~ieVdE~GteAaaat~~~~-~~~~~~f~~drPF~f~I~d~~t~~iLF~G~v~~P 372 (372)
T cd02054 316 LNKVFFELSEDGTEVQESTQQLN-KPEVLEVTLNRPFLFAVYEANSNAILFLGRVTNP 372 (372)
T ss_pred eeeEEEEEccCceeccccccccc-CCCCceEEecCCEEEEEEECCCCcEEEEEEecCC
Confidence 99999999999999999997532 1235689999999999999999999999999998
No 5
>COG4826 Serine protease inhibitor [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.2e-58 Score=423.26 Aligned_cols=299 Identities=23% Similarity=0.410 Sum_probs=266.0
Q ss_pred hhHHHHhhHHHHHHHHHHHhccCCCCCEEEchhhHHHHHHHHHcCCCchhHHHHHHhhCCCch--------hhHHhhc--
Q psy5102 10 LILRRGITQMTLDMERAIRSVMTKNQNVVFAPLSIVGALALVLLGSDGQTKDELTHFMGVATG--------RSLSNKL-- 79 (357)
Q Consensus 10 ~~~~~~~~~Fa~~l~~~l~~~~~~~~N~v~SP~si~~aL~~l~~Ga~g~T~~eL~~~Lg~~~~--------~~ll~~l-- 79 (357)
..+.+++|.|+++||.++++.....+|+.|||.||+.+++|-|.||.|.|++||..+++++.. +++...+
T Consensus 36 y~ia~ANNaF~FdlyS~~~~~~~~~~Ni~fSPySV~~AmAmcY~GaeGsTkeqmsnvfyfp~n~~vl~~~~~~~nd~i~s 115 (410)
T COG4826 36 YDIAAANNAFAFDLYSELAKQEGEAENILFSPYSVSAAMAMCYEGAEGSTKEQMSNVFYFPINKTVLKVREKSLNDKINS 115 (410)
T ss_pred cchhhcccchhHHHHHHHHhhcccccceeeccHHHHHHHHHHhcccCcchHHHHHhheeccccchHhhhhHHhhcccccC
Confidence 457789999999999999966235789999999999999999999999999999999999852 3333333
Q ss_pred -c-cceeeee---eccc---------------------cCCH----HHH---HHHHH---hCCC-cccCCCCCCCcccee
Q psy5102 80 -T-AHSLRRG---ITQM---------------------TLDM----ERA---IRSVM---TKNQ-NVVFAPLSIVGALAL 122 (357)
Q Consensus 80 -~-~~~l~~a---f~~~---------------------~~dF----~~a---IN~wv---T~g~-~~~l~~~~l~~~t~l 122 (357)
+ ++.+..+ |+++ .+|| +.| ||+|| |+|+ +++++.+.+.+|+++
T Consensus 116 p~~~y~le~AnalWvqedyplke~yv~n~r~yy~aevtnlDF~~~p~~s~dtINkWvEekT~gkIkdlVp~~~i~~d~rl 195 (410)
T COG4826 116 PNDSYELETANALWVQEDYPLKENYVNNVRNYYDAEVTNLDFVNKPDASRDTINKWVEEKTNGKIKDLVPEDYIGPDTRL 195 (410)
T ss_pred CccchhhhhhhhHHHhcCCCCCHHHHHHHHhhhhcceeecccccCchHHHHHHHHHHHHhhcchHhhcCCccccCCceeE
Confidence 2 5555555 5554 7899 233 99999 9999 999999999999999
Q ss_pred Eeecc-------cCCCCCCCceeeeeeec------------c-cccccCCCCeEEEe--ecCCeEEEEEEecCCCChhHH
Q psy5102 123 VLLGS-------DGQTKDELTHFMGVATG------------R-SLSNNPEAYASFLE--KMRNEVYMYFILPKNPDLSEF 180 (357)
Q Consensus 123 vLvna-------~~~F~~~~T~~~~F~~~------------~-~~~~~~~~~~~vve--y~~~~~sm~iiLP~~~~L~~l 180 (357)
+|+|| ...||++.|.++.|+.. . .|.|.+..++++|+ |+++++||+|+||+...+.++
T Consensus 196 vltnAiYFnGkW~~efDk~~t~krtFy~a~~~d~sv~mMs~~g~fny~et~kakiveLPy~gd~lSmYIvLPk~nNi~~F 275 (410)
T COG4826 196 VLTNAIYFNGKWWPEFDKQMTGKRTFYPAKGEDKSVDMMSICGDFNYGETSKAKIVELPYKGDDLSMYIVLPKDNNITEF 275 (410)
T ss_pred EEEeeEEEcCeeccccchhhccceeeecCChhhhcchhHHhcCCCCcccCcCceEEEcccCCCceEEEEEeeCCCChHHH
Confidence 99999 78899999999999987 2 77888999999999 999999999999955699999
Q ss_pred hhccChhHHHHHHHhcCce-eEEEEeceeeEeeccchHHHhhhCCccccCCCCCCCCCCCCCCCCceeeeeeEEEEEEEc
Q psy5102 181 TKDLDYDKFSRIIESTNKV-DVIYTIPKMKVTSSTELRTVLNTMNVTSMFDVSKSDLSNMLDDRGVAVDQVFHKVDIEVT 259 (357)
Q Consensus 181 ~~~L~~~~l~~~~~~l~~~-~v~l~lPkF~i~~~~dL~~~L~~lGl~~~F~~~~adfs~is~~~~l~vs~v~qk~~iev~ 259 (357)
++.|+.+.+.+|..+|+.+ .|++.||||+.+.+..|++.|.+||+-++|+. .||||||++. ++.|++|+|+++|+|+
T Consensus 276 e~nft~e~y~elk~~m~~~~~v~v~iPkFkfetk~el~~aLieMGvvdAF~n-~AnFSgI~~~-~L~Is~V~Hqa~idv~ 353 (410)
T COG4826 276 ENNFTLEKYTELKSNMEDQDEVEVEIPKFKFETKTELKDALIEMGVVDAFEN-TANFSGISDR-RLEISDVFHQAFIDVD 353 (410)
T ss_pred HhhccHHHHHHHHhcCCccceEEEEecceeeeehhhhhHHHHHhhHHHHhhc-ccCcccccCC-cccHHHHhhhhheecc
Confidence 9999999999999999877 89999999999999999999999999999996 7999999987 6999999999999999
Q ss_pred cCccccccccceeee-ec---CCCEEEEcCceEEEEEECCCCcEEEEEEEcCCCC
Q psy5102 260 EQGTVAAASTGIIIT-RI---SKPTVKINRPFIFFIYHKPTDSIVFWGSIYKPEP 310 (357)
Q Consensus 260 E~G~~aaa~t~~~~~-~s---~~~~f~~nrPFlf~I~d~~t~~iLF~G~v~~P~~ 310 (357)
|+|++|+|+|++.+. .+ .-.+|++||||+|+|.|+.||.|||||+|.+|+.
T Consensus 354 EeGteAaAAT~v~~~a~~~~~~~~e~~vD~PFlf~i~D~~s~~IlFiG~Vv~P~~ 408 (410)
T COG4826 354 EEGTEAAAATAVVFKAVCAKGGWVEFVVDHPFLFVIEDRRSGCILFIGKVVNPEY 408 (410)
T ss_pred ccchhhhhhceeeeeeeeecccceEEEecCceEEEEecCCcceEEEEeeecCCCC
Confidence 999999999988776 33 3459999999999999999999999999999974
No 6
>cd02051 PAI-1_nexin-1 Plasminogen activator inhibitor-1_like. Plasminogen activator inhibitor-1 (PAI-1) is the primary, fast-acting inhibitor of plasminogen activators. It is often bound to vitronectin, an abundant component of the extracellular matrix in many tissues. Protease nexin-1 is a potent serpin able to inhibit thrombin, plasmin, and plasminogen activators. PAI-1 and nexin-1 are members of the serpin superfamily and represent clade E. In general, SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones.
Probab=100.00 E-value=1.3e-57 Score=447.27 Aligned_cols=298 Identities=26% Similarity=0.426 Sum_probs=258.5
Q ss_pred hhHHHHhhHHHHHHHHHHHhccCCCCCEEEchhhHHHHHHHHHcCCCchhHHHHHHhhCCCch------hhHHhhc-c--
Q psy5102 10 LILRRGITQMTLDMERAIRSVMTKNQNVVFAPLSIVGALALVLLGSDGQTKDELTHFMGVATG------RSLSNKL-T-- 80 (357)
Q Consensus 10 ~~~~~~~~~Fa~~l~~~l~~~~~~~~N~v~SP~si~~aL~~l~~Ga~g~T~~eL~~~Lg~~~~------~~ll~~l-~-- 80 (357)
..+..+.++|+++||+++... .+++|+|+||+||+.+|+|++.||+|+|++||.++||++.. +.+.+.+ +
T Consensus 5 ~~~~~~~~~F~~~l~~~~~~~-~~~~N~v~SP~si~~~L~~l~~GA~g~T~~el~~~L~~~~~~~~~~~~~l~~~l~~~~ 83 (377)
T cd02051 5 SSLEELGSDFGIQVFNQVAQA-RPQENVVVSPHGIASVLGMLQLGADGKTKKQLQTVMRYKINGVAKALKKLNKAIVSKK 83 (377)
T ss_pred HHHHHHHhHHHHHHHHHHHhc-CCCCcEEECcHHHHHHHHHHHhhcCCcHHHHHHHHhCCChhHHHHHHHHHHHHHhccC
Confidence 457789999999999999876 68899999999999999999999999999999999999762 3333333 1
Q ss_pred -cceeeee---eccc---------------------cCCH---HHH---HHHHH---hCCC-cccCCCC-CCCccceeEe
Q psy5102 81 -AHSLRRG---ITQM---------------------TLDM---ERA---IRSVM---TKNQ-NVVFAPL-SIVGALALVL 124 (357)
Q Consensus 81 -~~~l~~a---f~~~---------------------~~dF---~~a---IN~wv---T~g~-~~~l~~~-~l~~~t~lvL 124 (357)
+..++++ |+++ .+|| +.+ ||+|| |+|+ ++++++. .++++|.++|
T Consensus 84 ~~~~l~~an~i~~~~~~~l~~~f~~~~~~~f~a~~~~vdF~~~~~a~~~IN~Wv~~~T~g~I~~~l~~~~~i~~~t~l~l 163 (377)
T cd02051 84 NKDIVTTANAVFAQSGFKMEVPFVPRNKEVFQCEVKSVDFSDPETAAFSINDWVKNETKGMIDNLLSPDLADDALTRLVL 163 (377)
T ss_pred CccchHHHHHHHhcCCCchhHHHHHHHHHHhcCeeEEECCCCHHHHHHHHHHHHHHhcCCCccccCCCCCCCCccceEEE
Confidence 2233433 4333 5789 333 99999 9999 9999876 6888999999
Q ss_pred ecc-------cCCCCCCCceeeeeeec------------c---cccccC---CCCeEEEe--ecCCeEEEEEEec-CC-C
Q psy5102 125 LGS-------DGQTKDELTHFMGVATG------------R---SLSNNP---EAYASFLE--KMRNEVYMYFILP-KN-P 175 (357)
Q Consensus 125 vna-------~~~F~~~~T~~~~F~~~------------~---~~~~~~---~~~~~vve--y~~~~~sm~iiLP-~~-~ 175 (357)
+|| +.||++..|.+++||.. . +|++.+ +.++++|+ |++++++|+|||| +. .
T Consensus 164 vnai~Fkg~W~~~F~~~~T~~~~F~~~~~~~~~V~mM~~~~~~~~~~~~~~~~~~~~vv~LPy~~~~~sm~iiLP~~~~~ 243 (377)
T cd02051 164 VNALYFKGLWKSRFQPESTKKRTFHAGDGKTYQVPMLAQLSVFRSGSASTPNGLWYNIIELPYHGESISMLIALPTEKST 243 (377)
T ss_pred EeeeEeeeeecCCCChhhCcccccCcCCCcEEeehhhcccCceeeEeeccccccccEEEEEecCCCeEEEEEEeccccCC
Confidence 999 89999999999999976 1 333333 34589999 9999999999999 55 4
Q ss_pred ChhHHhhccChhHHHHHHHhcCceeEEEEeceeeEeeccchHHHhhhCCccccCCCCCCCCCCCCCCCCceeeeeeEEEE
Q psy5102 176 DLSEFTKDLDYDKFSRIIESTNKVDVIYTIPKMKVTSSTELRTVLNTMNVTSMFDVSKSDLSNMLDDRGVAVDQVFHKVD 255 (357)
Q Consensus 176 ~L~~l~~~L~~~~l~~~~~~l~~~~v~l~lPkF~i~~~~dL~~~L~~lGl~~~F~~~~adfs~is~~~~l~vs~v~qk~~ 255 (357)
+|.+++++|+.+.+..|.++++++.|+|.||||++++++||+++|++||++++|++..|||++|+++++++|++++|++.
T Consensus 244 ~L~~l~~~l~~~~l~~~~~~~~~~~v~v~lPkF~i~~~~~L~~~L~~lGl~~~F~~~~Adfs~i~~~~~l~v~~v~hka~ 323 (377)
T cd02051 244 PLSAIIPHISTKTIQSWMGTMVPKRMQLVLPKFTVEAETDLKEPLKALGITDMFDQSKANFTKISRSESLHVSHALQKAK 323 (377)
T ss_pred CHHHHHHhcCHHHHHHHHHhCCceEEEEEccCEEEEEecChHHHHHHCCCcccccCCCCCcccccCCCCEEEEeEEEEEE
Confidence 79999999999999999999999999999999999999999999999999999997579999999877899999999999
Q ss_pred EEEccCccccccccceeee-ecCCCEEEEcCceEEEEEECCCCcEEEEEEEcCC
Q psy5102 256 IEVTEQGTVAAASTGIIIT-RISKPTVKINRPFIFFIYHKPTDSIVFWGSIYKP 308 (357)
Q Consensus 256 iev~E~G~~aaa~t~~~~~-~s~~~~f~~nrPFlf~I~d~~t~~iLF~G~v~~P 308 (357)
|+|||+|++|+|+|.+... ++.+.+|++||||+|+|+|+.||.|||+|+|.+|
T Consensus 324 iev~E~Gt~aaa~t~~~~~~~~~~~~f~~drPF~f~I~~~~t~~~LF~G~v~~P 377 (377)
T cd02051 324 IEVNEDGTKASAATTAILIARSSPPWFIVDRPFLFFIRHNPTGTILFMGQINKP 377 (377)
T ss_pred EEECCCccchhhhcceeeeccCCCCeEEeeCCEEEEEEeCCCCcEEEEEEecCC
Confidence 9999999999999987655 5567789999999999999999999999999998
No 7
>KOG2392|consensus
Probab=100.00 E-value=9.5e-58 Score=447.15 Aligned_cols=299 Identities=30% Similarity=0.453 Sum_probs=268.4
Q ss_pred chhHHHHhhHHHHHHHHHHHhccCCCCCEEEchhhHHHHHHHHHcCCCchhHHHHHHhhCCCc----h------hhHHhh
Q psy5102 9 NLILRRGITQMTLDMERAIRSVMTKNQNVVFAPLSIVGALALVLLGSDGQTKDELTHFMGVAT----G------RSLSNK 78 (357)
Q Consensus 9 ~~~~~~~~~~Fa~~l~~~l~~~~~~~~N~v~SP~si~~aL~~l~~Ga~g~T~~eL~~~Lg~~~----~------~~ll~~ 78 (357)
...+.....+|+++||+.+... .+++|+||||+||..+|+|+++||+|.|++||+++|+++. + +.++..
T Consensus 4 ~~~~~~~~~~f~~~l~~~~~~~-~~~~Ni~fSP~SI~~aL~m~~lGa~g~T~~qi~~~L~~~~~~~~~~~~~~~~~~~~~ 82 (380)
T KOG2392|consen 4 MASLSQSEADFALDLYRQLAKS-APDENVVFSPLSISSALAMVSLGAKGETADQILKALHFNSTDEENEVHESFQSLLLL 82 (380)
T ss_pred hhhhhhhhhHHHHHHHHHHHhh-CCCCCEEEChHHHHHHHHHHHhcCCccHHHHHHHHhCCCCCcchHHHHHHHHHHHHH
Confidence 4556778899999999999976 6899999999999999999999999999999999999985 1 333332
Q ss_pred c---c-cceeeee---eccc---------------------cCCH----HHH---HHHHH---hCCC-cccCCCCCCCcc
Q psy5102 79 L---T-AHSLRRG---ITQM---------------------TLDM----ERA---IRSVM---TKNQ-NVVFAPLSIVGA 119 (357)
Q Consensus 79 l---~-~~~l~~a---f~~~---------------------~~dF----~~a---IN~wv---T~g~-~~~l~~~~l~~~ 119 (357)
+ . ++.++++ |+++ .+|| +.+ ||.|+ |+|+ .+++.++++++.
T Consensus 83 ~~~~~~~~~l~~an~l~~~~~~~~~~~f~~~~~~~y~a~~~~~dF~~~~e~~~~~IN~wv~~~T~gkI~~ll~~~~~~~~ 162 (380)
T KOG2392|consen 83 LNSTESGYELKLANRLFVSKSLKLLQKFLELVKKLYKAEAESLDFSNDTEEAAKEINEWVEEHTNGKIKDLLSPDSIDSL 162 (380)
T ss_pred hccccCCceEEEeeeheecCCccccHHHHHHHHHHHhCcceeecCccChHHHHHHHHHHHHHHcCCchhhhcCCCCCCcc
Confidence 2 2 5667666 6555 6788 233 99999 9999 999999999989
Q ss_pred ceeEeecc-------cCCCCCCCceeeeeeec--------------c-cccccCCCCeEEEe--ecCCeEEEEEEec-CC
Q psy5102 120 LALVLLGS-------DGQTKDELTHFMGVATG--------------R-SLSNNPEAYASFLE--KMRNEVYMYFILP-KN 174 (357)
Q Consensus 120 t~lvLvna-------~~~F~~~~T~~~~F~~~--------------~-~~~~~~~~~~~vve--y~~~~~sm~iiLP-~~ 174 (357)
|.++|+|| +.+|+++.|+.++||.. . .|.++.++.|++++ |.+.+++|+|+|| +.
T Consensus 163 t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~~~~v~VpmM~~~~~f~~~~~~~l~~~vl~LpY~~~~~sm~i~LP~~~ 242 (380)
T KOG2392|consen 163 TVLVLVNAIYFKGKWEKKFDKELTKESDFFLSEGTSVKVPMMHQEGSFRYAEDEDLFAVVLELPYKGSNLSMLILLPDER 242 (380)
T ss_pred hhheeeehheeehhhcCCCChhhccccccEECCCeEEEeechhccCccceEEeCCcceEEEECccCCCCeEEEEEeCCCC
Confidence 99999999 99999999999999987 1 46788899999999 9998899999999 88
Q ss_pred CChhHHhhccChhHHHHHH-HhcCceeEEEEeceeeEeeccchHHHhhhCCccccCCCCCCCCCCCCCCCCceeeeeeEE
Q psy5102 175 PDLSEFTKDLDYDKFSRII-ESTNKVDVIYTIPKMKVTSSTELRTVLNTMNVTSMFDVSKSDLSNMLDDRGVAVDQVFHK 253 (357)
Q Consensus 175 ~~L~~l~~~L~~~~l~~~~-~~l~~~~v~l~lPkF~i~~~~dL~~~L~~lGl~~~F~~~~adfs~is~~~~l~vs~v~qk 253 (357)
.+|.+++++|+.+.+..|. ..+..+.|+|.||||+++.++||+++|++|||+++|+...|||++|+++.+++|++++||
T Consensus 243 ~gL~~le~~L~~~~~~~~~~~~~~~~~v~v~lPKfkie~~~dL~~~L~~lGi~~~F~~~~adls~ls~~~~l~vs~v~Hk 322 (380)
T KOG2392|consen 243 DGLKELEKKLTSETLVEWLFSRMSEKVVEVSLPKFKIEFDYDLKEVLKQLGITDIFSESKADLSGLSESSNLYISKVIHK 322 (380)
T ss_pred CCHHHHHHHhChhhHHHhhhhhhhceeEEEECCCEEEEEEechHHHHHHcCChhccCCCccccccCccCCCeeeeeeeEE
Confidence 8999999999999999999 789999999999999999999999999999999999985599999999778999999999
Q ss_pred EEEEEccCccccccccceeee-ecC--CCEEEEcCceEEEEEECCCCcEEEEEEEcCC
Q psy5102 254 VDIEVTEQGTVAAASTGIIIT-RIS--KPTVKINRPFIFFIYHKPTDSIVFWGSIYKP 308 (357)
Q Consensus 254 ~~iev~E~G~~aaa~t~~~~~-~s~--~~~f~~nrPFlf~I~d~~t~~iLF~G~v~~P 308 (357)
+.|||||+|++|+|+|++.+. ++. +.+|+|||||+|+|+++.|+.|||+|+|.+|
T Consensus 323 a~ieV~E~GteAaaat~~~~~~~~~~~~~~f~adhPFlF~I~~~~t~~iLF~G~v~~P 380 (380)
T KOG2392|consen 323 AFIEVDEEGTEAAAATAVEIVLRSLPPPEEFVADHPFLFVIRDNKTGSILFLGRVVDP 380 (380)
T ss_pred EEEEECCCCchhhhhhhhHHhhccCCCCCeEECCCCEEEEEEECCCCcEEEEEEccCC
Confidence 999999999999999988766 443 4899999999999999999999999999998
No 8
>cd02059 ovalbumin_like The ovalbumin_like group of serpins contains ovalbumin, the squamous cell carcinoma antigen 1 (SCCA1) and other closely related serpins of clade B of the serpin superfamily. Ovalbumin, the major protein component of avian egg white, is a non-inhibitory member of SERine Proteinase INhibitorS (serpins). In contrast, SCCA1 inhibits cysteine proteinases such as cathepsin S, K, L, and papain, a so called cross-class serpin.
Probab=100.00 E-value=1.3e-57 Score=449.01 Aligned_cols=295 Identities=27% Similarity=0.452 Sum_probs=260.3
Q ss_pred HHHhhHHHHHHHHHHHhccCCCCCEEEchhhHHHHHHHHHcCCCchhHHHHHHhhCCCch--------------------
Q psy5102 13 RRGITQMTLDMERAIRSVMTKNQNVVFAPLSIVGALALVLLGSDGQTKDELTHFMGVATG-------------------- 72 (357)
Q Consensus 13 ~~~~~~Fa~~l~~~l~~~~~~~~N~v~SP~si~~aL~~l~~Ga~g~T~~eL~~~Lg~~~~-------------------- 72 (357)
..++++||++||+.+... .+++|+|+||+||+.+|+||+.||+|+|++||.++||++..
T Consensus 2 ~~~~~~Fa~~l~~~~~~~-~~~~N~v~SP~si~~~L~~l~~Ga~g~T~~el~~~L~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (389)
T cd02059 2 SAANTEFCFDLFKELKKN-HKNKNIFFSPLSISSALGMVLLGARDDTAAQIEKVLHFDHASGSGSSKPAASAQCNQSGGV 80 (389)
T ss_pred cchhhHHHHHHHHHHhhc-CCCCCEEECHHHHHHHHHHHhcccCCcHHHHHHHHhCCCccccccccccccccccccHHHH
Confidence 357899999999999876 67899999999999999999999999999999999999630
Q ss_pred ----hhHHhhc---c-cceeeee---eccc---------------------cCCH----HHH---HHHHH---hCCC-cc
Q psy5102 73 ----RSLSNKL---T-AHSLRRG---ITQM---------------------TLDM----ERA---IRSVM---TKNQ-NV 109 (357)
Q Consensus 73 ----~~ll~~l---~-~~~l~~a---f~~~---------------------~~dF----~~a---IN~wv---T~g~-~~ 109 (357)
+.++..+ + +..++++ |+++ .+|| +.+ ||+|+ |+|+ ++
T Consensus 81 ~~~~~~l~~~~~~~~~~~~l~~an~l~~~~~~~l~~~f~~~~~~~~~~~~~~vdF~~~~~~~~~~IN~wv~~~T~g~I~~ 160 (389)
T cd02059 81 HSQFKDLLSQINKPNDDYELSIANRLYGEKTYPFHQEYLDCVEKLYRAKLEPVDFQNAAEASRKKINSWVESQTNGKIKN 160 (389)
T ss_pred HHHHHHHHHHHcCCCCCcEEEEeeehhhhCCCCccHHHHHHHHHHhcCeeEEEcCCCCHHHHHHHHHHHHHHhccchhhh
Confidence 2234333 2 4556665 6554 6788 233 99999 9999 99
Q ss_pred cCCCCCCCccceeEeecc-------cCCCCCCCceeeeeeec--------------c-cccccCCCCeEEEe--ecCCeE
Q psy5102 110 VFAPLSIVGALALVLLGS-------DGQTKDELTHFMGVATG--------------R-SLSNNPEAYASFLE--KMRNEV 165 (357)
Q Consensus 110 ~l~~~~l~~~t~lvLvna-------~~~F~~~~T~~~~F~~~--------------~-~~~~~~~~~~~vve--y~~~~~ 165 (357)
++.+++++++++++|+|| +.||++..|..++||.. . +|++.++++++||+ |+++++
T Consensus 161 ~~~~~~i~~~t~lvlvna~~Fkg~W~~~F~~~~T~~~~F~~~~g~~~~V~mM~~~~~~~~~~~~~~~~~vl~LPy~~~~~ 240 (389)
T cd02059 161 LFGKGTIDSSTVLVLVNAIYFKGKWEKKFEKENTVDAPFKLNENENKPVQMMYQIGKFKLASIEEPKMKILELPYAGGGL 240 (389)
T ss_pred cCCCCCCCcccceeeEeeeEEeeeccCCCCcccCccCccEeCCCceEEeehhcccCcEEEEEeCCCCcEEEEeecCCCce
Confidence 999889999999999999 89999999999999976 1 55678899999999 999899
Q ss_pred EEEEEec-CCCChhHHhhccChhHHHHHH--HhcCceeEEEEeceeeEeeccchHHHhhhCCccccCCCCCCCCCCCCCC
Q psy5102 166 YMYFILP-KNPDLSEFTKDLDYDKFSRII--ESTNKVDVIYTIPKMKVTSSTELRTVLNTMNVTSMFDVSKSDLSNMLDD 242 (357)
Q Consensus 166 sm~iiLP-~~~~L~~l~~~L~~~~l~~~~--~~l~~~~v~l~lPkF~i~~~~dL~~~L~~lGl~~~F~~~~adfs~is~~ 242 (357)
+|+|||| +..+|.+++++|+.+.+..|. ..++.+.|+|.||||++++++||+++|++||++++|++..|||++|+++
T Consensus 241 sm~iiLP~~~~~L~~l~~~l~~~~l~~~~~~~~~~~~~v~l~lPkF~i~~~~dl~~~L~~mGi~~~F~~~~adfs~~~~~ 320 (389)
T cd02059 241 SMIVLLPDEISGLEQLESKLTYEKLMEWTSSENMRERKVEVYLPRFKLEEKYNLKSVLKAMGMTDIFSESKADLSGISSS 320 (389)
T ss_pred EEEEEccCCCCCHHHHHHHhCHHHHHHhhhhhcceeeEEEEECCCEEeeeeecHHHHHHHcCCccccCCccccccccCCC
Confidence 9999999 888999999999999988886 4678899999999999999999999999999999999745999999987
Q ss_pred CCceeeeeeEEEEEEEccCccccccccceeee-ec--CCCEEEEcCceEEEEEECCCCcEEEEEEEcCC
Q psy5102 243 RGVAVDQVFHKVDIEVTEQGTVAAASTGIIIT-RI--SKPTVKINRPFIFFIYHKPTDSIVFWGSIYKP 308 (357)
Q Consensus 243 ~~l~vs~v~qk~~iev~E~G~~aaa~t~~~~~-~s--~~~~f~~nrPFlf~I~d~~t~~iLF~G~v~~P 308 (357)
.+++|++|+|++.|+|||+|++|+++|..... ++ .+.+|++||||+|+|+|+.||.|||+|+|.+|
T Consensus 321 ~~l~v~~v~hka~ieV~E~G~~a~a~t~~~~~~~~~~~~~~f~~nrPF~f~I~~~~t~~iLF~G~v~~P 389 (389)
T cd02059 321 KSLYLSKAIHKSYVEVNEEGTEAAAATGAGIVEKSLPVSEEFRADHPFLFFIRHNKTNTILFFGRFSSP 389 (389)
T ss_pred CCceEeeeeeeEEEEECCCceeecccccceeeecCCCCCceEEecCCEEEEEEECCCCeEEEEEEecCC
Confidence 78999999999999999999999999986554 43 45689999999999999999999999999998
No 9
>cd02058 PAI-2 Plasminogen Activator Inhibitor-2 (PAI-2). PAI-2 is a serine protease inhibitor that belongs to the ov-serpin branch of the serpin superfamily. It is is an effective inhibitor of urinary plasminogen activator (urokinase or uPA) and is involved in cell differentiation, tissue growth and regeneration.
Probab=100.00 E-value=9.6e-58 Score=448.72 Aligned_cols=295 Identities=29% Similarity=0.485 Sum_probs=259.4
Q ss_pred HHHhhHHHHHHHHHHHhccCCCCCEEEchhhHHHHHHHHHcCCCchhHHHHHHhhCCCch-----------hhHHhhc--
Q psy5102 13 RRGITQMTLDMERAIRSVMTKNQNVVFAPLSIVGALALVLLGSDGQTKDELTHFMGVATG-----------RSLSNKL-- 79 (357)
Q Consensus 13 ~~~~~~Fa~~l~~~l~~~~~~~~N~v~SP~si~~aL~~l~~Ga~g~T~~eL~~~Lg~~~~-----------~~ll~~l-- 79 (357)
..+.++||++||+++... .+++|+|+||+||+.+|+||+.||+|+|++||.++||++.. +.+++.+
T Consensus 2 ~~~~~~F~~~l~~~~~~~-~~~~N~v~SP~si~~aL~~l~~GA~g~T~~el~~~L~~~~~~~~~~~~~~~~~~l~~~~~~ 80 (380)
T cd02058 2 SAANTSFALNLFKKLAES-SPTKNIFFSPWSISSALAMVYLGAKGNTAAQMAKVLQFNEVGGNSEDIHSGFQSLLSEINK 80 (380)
T ss_pred chhhhHHHHHHHHHHhhc-CCCCcEEECHHHHHHHHHHHhcccCCcHHHHHHHHhCcCccccchHHHHHHHHHHHHHHhC
Confidence 457899999999999876 67899999999999999999999999999999999999651 2344444
Q ss_pred -c-cceeeee---eccc---------------------cCCH----HHH---HHHHH---hCCC-cccCCCCCCCcccee
Q psy5102 80 -T-AHSLRRG---ITQM---------------------TLDM----ERA---IRSVM---TKNQ-NVVFAPLSIVGALAL 122 (357)
Q Consensus 80 -~-~~~l~~a---f~~~---------------------~~dF----~~a---IN~wv---T~g~-~~~l~~~~l~~~t~l 122 (357)
+ +..++++ |+++ .+|| +.| ||+|| |+|+ ++++++.++++++++
T Consensus 81 ~~~~~~l~~~n~l~~~~~~~l~~~f~~~~~~~~~~~~~~vdF~~~~~~a~~~IN~wv~~~T~g~I~~~~~~~~i~~~t~l 160 (380)
T cd02058 81 PGTNYLLKSANRLYGEKTYPFLEKFLQLTQKYYQAEPQAVDFVEAAEQARKEINSWVERQTEGKIQNLLPPGSVDSLTRL 160 (380)
T ss_pred CCCccEeehhhhhhhcCCCcHhHHHHHHHHhhhcCceEEecCCCCHHHHHHHHHHHHHHhcccchhhcCCcCCCChhHHh
Confidence 2 4455555 5554 5788 234 99999 9999 999998899999999
Q ss_pred Eeecc-------cCCCCCCCceeeeeeec--------------c-cccccCCCCeEEEe--ecCCeEEEEEEec-CC---
Q psy5102 123 VLLGS-------DGQTKDELTHFMGVATG--------------R-SLSNNPEAYASFLE--KMRNEVYMYFILP-KN--- 174 (357)
Q Consensus 123 vLvna-------~~~F~~~~T~~~~F~~~--------------~-~~~~~~~~~~~vve--y~~~~~sm~iiLP-~~--- 174 (357)
+|+|| +.||++..|..++||.. . +|.+.+++++++|+ |++++++|+|||| +.
T Consensus 161 vlvna~~Fkg~W~~~F~~~~T~~~~F~~~~~~~~~V~mM~~~~~~~~~~~~~~~~~vv~LPy~~~~~sm~iiLP~~~~~~ 240 (380)
T cd02058 161 VLVNAIYFKGNWEEKFLKENTRERPFRLNKNTTKPVQMMFLKKKFPITYIEELKAQVLELPYVGKELSMFILLPDEIEDV 240 (380)
T ss_pred HhhheeEEccccCCCCCcccCCcccccCCCCceEEeechhhcCceeeEEcCCCCcEEEEccCCCCceEEEEEeccccccc
Confidence 99999 89999999999999975 1 56777899999999 9988999999999 76
Q ss_pred -CChhHHhhccChhHHHHHH--HhcCceeEEEEeceeeEeeccchHHHhhhCCccccCCCCCCCCCCCCCCCCceeeeee
Q psy5102 175 -PDLSEFTKDLDYDKFSRII--ESTNKVDVIYTIPKMKVTSSTELRTVLNTMNVTSMFDVSKSDLSNMLDDRGVAVDQVF 251 (357)
Q Consensus 175 -~~L~~l~~~L~~~~l~~~~--~~l~~~~v~l~lPkF~i~~~~dL~~~L~~lGl~~~F~~~~adfs~is~~~~l~vs~v~ 251 (357)
.+|.+++++|+...+..|. ..++++.|+|+||||++++++||.++|++||++.+|+...|||++|+.+.+++|++|+
T Consensus 241 ~~~L~~l~~~l~~~~l~~~~~~~~~~~~~v~l~lPKF~i~~~~~l~~~L~~lGl~~~F~~~~adfs~i~~~~~l~vs~v~ 320 (380)
T cd02058 241 TTGLEKLEKELTYEKLNEWTSPEMMEEYEVEVYLPKFKLEESYDLKSTLSSMGMEDAFDPGKADFSGMSSANDLFLSKVF 320 (380)
T ss_pred cchHHHHHHHhCHHHHHHhhhhhcceeeEEEEEeeEEEEeeeeccHHHHHHcCccccCCcccccccCCCCCCCCcccccc
Confidence 8899999999999999986 3578899999999999999999999999999999999756999999877689999999
Q ss_pred EEEEEEEccCccccccccceeee-ec--CCCEEEEcCceEEEEEECCCCcEEEEEEEcCC
Q psy5102 252 HKVDIEVTEQGTVAAASTGIIIT-RI--SKPTVKINRPFIFFIYHKPTDSIVFWGSIYKP 308 (357)
Q Consensus 252 qk~~iev~E~G~~aaa~t~~~~~-~s--~~~~f~~nrPFlf~I~d~~t~~iLF~G~v~~P 308 (357)
|++.|+|||+|++|+++|..... ++ .+.+|++||||+|+|+|+.++.|||+|+|.+|
T Consensus 321 hk~~ieV~E~G~~a~a~t~~~~~~~~~~~~~~f~~nrPF~f~I~d~~t~~iLF~G~v~~P 380 (380)
T cd02058 321 HKAFVEVNEEGTEAAAATAAIMMLRCLMPSPRFNADHPFLFFIRHNKTNTILFFGRFCSP 380 (380)
T ss_pred eeeEEEECCCCcccccccchheeeccCCCCCeEEEECCEEEEEEECCCCeEEEEEEecCC
Confidence 99999999999999999976544 33 35789999999999999999999999999998
No 10
>cd02046 hsp47 Heat shock protein 47 (Hsp47), also called colligin, because of its collagen binding ability, is a chaperone specific for procollagen. It has been shown to be essential for collagen biosynthesis, but its exact function is still unclear. Hsp47 is a non-inhibitory member of the SERPIN superfamily and corresponds to clade H.
Probab=100.00 E-value=4.3e-57 Score=441.72 Aligned_cols=291 Identities=19% Similarity=0.305 Sum_probs=252.4
Q ss_pred HHHHhhHHHHHHHHHHHhccCCCCCEEEchhhHHHHHHHHHcCCCchhHHHHHHhhCCCc----h-----hhHHhhc---
Q psy5102 12 LRRGITQMTLDMERAIRSVMTKNQNVVFAPLSIVGALALVLLGSDGQTKDELTHFMGVAT----G-----RSLSNKL--- 79 (357)
Q Consensus 12 ~~~~~~~Fa~~l~~~l~~~~~~~~N~v~SP~si~~aL~~l~~Ga~g~T~~eL~~~Lg~~~----~-----~~ll~~l--- 79 (357)
+..++++||++||+++... .+++|+|+||+||+.+|+|++.||+|+|++||.++||+.. . ++++..+
T Consensus 3 ~~~~~~~f~~~l~~~~~~~-~~~~N~v~SP~si~~aLa~l~~Ga~g~T~~ql~~~L~~~~~~~~~~~~~~~~l~~~l~~~ 81 (366)
T cd02046 3 LADRSAGLAFNLYHAMAKD-KGVENILLSPVVVASSLGLVSMGGKASTASQAKAVLSADKLKDEHVHTGLSELLNEVSNS 81 (366)
T ss_pred hhhhhhHHHHHHHHHhhcc-CCCCeEEEChHHHHHHHHHHHhhcCccHHHHHHHHhCCCCCCcHHHHHHHHHHHHHhhcC
Confidence 4567899999999999876 6789999999999999999999999999999999999863 1 3444444
Q ss_pred -c-cceeeee---eccc---------------------cCCH---HHH---HHHHH---hCCC-cccCCCCCCCccceeE
Q psy5102 80 -T-AHSLRRG---ITQM---------------------TLDM---ERA---IRSVM---TKNQ-NVVFAPLSIVGALALV 123 (357)
Q Consensus 80 -~-~~~l~~a---f~~~---------------------~~dF---~~a---IN~wv---T~g~-~~~l~~~~l~~~t~lv 123 (357)
. +..++++ |+++ .+|| +.+ ||+|| |+|+ +++++. ++++|+++
T Consensus 82 ~~~~~~l~~an~~~~~~~~~l~~~F~~~~~~~y~~~~~~vdF~~~~~a~~~IN~wv~~~T~g~I~~~~~~--i~~~t~l~ 159 (366)
T cd02046 82 TARNVTWKIGNRLYGPSSVSFADDFVKNSKKHYNYEHSKINFRDKRSALNSINEWAAQTTDGKLPEVTKD--VEKTDGAL 159 (366)
T ss_pred CCCCcEEEEeeehhhcCCCChhHHHHHHHHHHhcCeeEEecCCChHHHHHHHHHHHHHhcCCchhHhhcc--CCcchHhh
Confidence 1 3456665 6554 6788 333 99999 9999 999864 88999999
Q ss_pred eecc-------cCCCCCCCceeeeeeec------------c---cccccCCCCeEEEe--ecCCeEEEEEEec-CCCChh
Q psy5102 124 LLGS-------DGQTKDELTHFMGVATG------------R---SLSNNPEAYASFLE--KMRNEVYMYFILP-KNPDLS 178 (357)
Q Consensus 124 Lvna-------~~~F~~~~T~~~~F~~~------------~---~~~~~~~~~~~vve--y~~~~~sm~iiLP-~~~~L~ 178 (357)
|+|| +.||++..|..++||.. . +|.+.++.++++|+ |++++++|+|||| +..+|.
T Consensus 160 lvnaiyFkg~W~~~F~~~~T~~~~F~~~~~~~v~V~mM~~~~~~~y~~~~~~~~~vl~LPy~~~~~sm~iiLP~~~~~L~ 239 (366)
T cd02046 160 IVNAMFFKPHWDEKFHHKMVDNRGFMVTRSYTVSVPMMHRTGLYGYYDDEENKLQIVEMPLAHKLSSMIFIMPYHVEPLE 239 (366)
T ss_pred hhheEEEcchhcCCCCHHhceeccEEeCCCeEEEhhHhhccCceeeEEeCCCCeEEEEEEcCCCcEEEEEEecCCCCCHH
Confidence 9999 99999999999999986 1 45556678999999 9988999999999 889999
Q ss_pred HHhhccChhHHHHHHHhcCceeEEEEeceeeEeeccchHHHhhhCCccccCCCCCCCCCCCCCCCCceeeeeeEEEEEEE
Q psy5102 179 EFTKDLDYDKFSRIIESTNKVDVIYTIPKMKVTSSTELRTVLNTMNVTSMFDVSKSDLSNMLDDRGVAVDQVFHKVDIEV 258 (357)
Q Consensus 179 ~l~~~L~~~~l~~~~~~l~~~~v~l~lPkF~i~~~~dL~~~L~~lGl~~~F~~~~adfs~is~~~~l~vs~v~qk~~iev 258 (357)
++++.|+.+.+..|.++++.+.|+|+||||++++++||+++|++||++++|++..|||++|+++++++|++|+|++.|||
T Consensus 240 ~l~~~L~~~~l~~~~~~~~~~~v~l~lPKF~i~~~~dL~~~L~~lGi~~~F~~~~Adfs~i~~~~~l~vs~v~hka~ieV 319 (366)
T cd02046 240 RLEKLLTREQLKTWISKMKKRAVAISLPKVSLEVSHDLQKHLGDLGLTEAIDKSKADLSKISGKKDLYLSNVFHAAALEW 319 (366)
T ss_pred HHHHHhCHHHHHHHHHhcceeEEEEEcceEEeeEEEcHHHHHHHcCCccccCCCCCCcccCCCCCceeeeeeEEEEEEEE
Confidence 99999999999999999999999999999999999999999999999999986579999999876899999999999999
Q ss_pred ccCccccccccceeeeecCCCEEEEcCceEEEEEECCCCcEEEEEEE
Q psy5102 259 TEQGTVAAASTGIIITRISKPTVKINRPFIFFIYHKPTDSIVFWGSI 305 (357)
Q Consensus 259 ~E~G~~aaa~t~~~~~~s~~~~f~~nrPFlf~I~d~~t~~iLF~G~v 305 (357)
||+|++|++++........+..|++||||+|+|+|..|+.|||+|+|
T Consensus 320 ~E~G~~aaa~~~~~~~~~~~~~f~~nrPF~f~I~~~~t~~iLF~G~v 366 (366)
T cd02046 320 DTEGNPFDPDIYGREEMRNPKLFYADHPFIFLVKDNKTNSILFIGRL 366 (366)
T ss_pred CCCcchhhhhhhhcccCCCCCEEEecCCEEEEEEECCCCcEEEEEeC
Confidence 99999998764311111135689999999999999999999999996
No 11
>cd02047 HCII Heparin cofactor II (HCII) inhibits thrombin, the final protease of the coagulation cascade. HCII is allosterically activated by binding to cell surface glycosaminoglycans (GAGs). The specificity of HCII for thrombin is conferred by a highly acidic hirudin-like N-terminal tail, which becomes available after GAG binding for interaction with the anion-binding exosite I of thrombin. This subgroup corresponds to clade D of the serpin superfamily.
Probab=100.00 E-value=8.8e-57 Score=447.57 Aligned_cols=295 Identities=23% Similarity=0.381 Sum_probs=258.1
Q ss_pred hhHHHHhhHHHHHHHHHHHhccCCCCCEEEchhhHHHHHHHHHcCCCchhHHHHHHhhCCCc-----------h-----h
Q psy5102 10 LILRRGITQMTLDMERAIRSVMTKNQNVVFAPLSIVGALALVLLGSDGQTKDELTHFMGVAT-----------G-----R 73 (357)
Q Consensus 10 ~~~~~~~~~Fa~~l~~~l~~~~~~~~N~v~SP~si~~aL~~l~~Ga~g~T~~eL~~~Lg~~~-----------~-----~ 73 (357)
..+..++++||++||+++....++++|+++||+||+.+|+|++.||+|+|++||.++||+++ . +
T Consensus 63 ~~~~~~~~~Fa~~L~~~l~~~~~~~~Niv~SP~SI~~aLaml~~GA~G~T~~ql~~~Lg~~~~~~~~~~~~~~~~~~~~~ 142 (436)
T cd02047 63 QRLNILNANFGFNLYRVLKDQVNTSDNILLAPVGISTAMGMISLGLKGQTQEQVLSTLGFKDFVNASSKYEITTVHNLFR 142 (436)
T ss_pred hHHHHHHhHHHHHHHHHHhhccCCCCcEEEChHHHHHHHHHHHhhcccHHHHHHHHHhcccccccccccccHHHHHHHHH
Confidence 45667899999999999975314688999999999999999999999999999999999963 1 2
Q ss_pred hHHhhc---c-cceeeee---eccc---------------------cCCH--H-HH--HHHHH---hCCC-cccCCCCCC
Q psy5102 74 SLSNKL---T-AHSLRRG---ITQM---------------------TLDM--E-RA--IRSVM---TKNQ-NVVFAPLSI 116 (357)
Q Consensus 74 ~ll~~l---~-~~~l~~a---f~~~---------------------~~dF--~-~a--IN~wv---T~g~-~~~l~~~~l 116 (357)
.+.+.+ . +..++++ |+++ .+|| + .+ ||+|| |+|+ ++++.. +
T Consensus 143 ~l~~~l~~~~~~~~L~~an~l~v~~~~~l~~~F~~~~~~~y~a~v~~vdF~~~~~~~~IN~wV~~~T~g~I~~~l~~--i 220 (436)
T cd02047 143 KLTHRLFRRNFGYTLRSVNDLYIKKDFPILLDFKNNVKTYYFAEAQIADFSDPAFITKTNNRIQKLTKGLIKEALEN--V 220 (436)
T ss_pred HHHHHhhcCCCCcEEeeeeehhhhCCCCccHHHHHHHHHHhcCceEEeCCCCHHHHHHHHHHHHHhcCCcccccccc--C
Confidence 233333 2 4566666 6554 5788 2 33 99999 9999 999964 8
Q ss_pred CccceeEeecc-------cCCCCCCCceeeeeeec--------------c-cccccCCCCeEEEe--ecCCeEEEEEEec
Q psy5102 117 VGALALVLLGS-------DGQTKDELTHFMGVATG--------------R-SLSNNPEAYASFLE--KMRNEVYMYFILP 172 (357)
Q Consensus 117 ~~~t~lvLvna-------~~~F~~~~T~~~~F~~~--------------~-~~~~~~~~~~~vve--y~~~~~sm~iiLP 172 (357)
+++|+++|+|| +.+|++..|..++||.. . .|++.+++++++++ |++ ++||+||||
T Consensus 221 ~~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~~~~v~V~MM~~~~~~~y~~~~~l~~~vleLPy~~-~~SM~iiLP 299 (436)
T cd02047 221 DPATLMMILNCIYFKGTWENKFPVEMTHNRNFRLNEKEVVKVPMMQTKGNFLAAADPELDCDILQLPYVG-NISMLIVVP 299 (436)
T ss_pred CcccceeeeeeeEEechhhCcCCcccccCcCCEeCCCCEEEEehhcccceEEEEEcCCcCcEEEEecCCC-CeeEEEEeC
Confidence 99999999999 89999999999999986 1 55667889999999 887 499999999
Q ss_pred -CCCChhHHhhccChhHHHHHHHhcCceeEEEEeceeeEeeccchHHHhhhCCccccCCCCCCCCCCCCCCCCceeeeee
Q psy5102 173 -KNPDLSEFTKDLDYDKFSRIIESTNKVDVIYTIPKMKVTSSTELRTVLNTMNVTSMFDVSKSDLSNMLDDRGVAVDQVF 251 (357)
Q Consensus 173 -~~~~L~~l~~~L~~~~l~~~~~~l~~~~v~l~lPkF~i~~~~dL~~~L~~lGl~~~F~~~~adfs~is~~~~l~vs~v~ 251 (357)
+..+|.+++++|+.+.+..|.++++.+.|+|+||||++++++||+++|++||++++|+. .|||++|+++ +++|++|+
T Consensus 300 ~~~~gL~~l~~~L~~~~l~~~~~~~~~~~v~v~LPKFkie~~~dL~~~L~~lGi~~lF~~-~adfs~is~~-~l~vs~v~ 377 (436)
T cd02047 300 HKLSGMKTLEKQITPQVVERWQKSMTNRTREVVLPKFKLEKNYNLIESLKLMGITDLFTE-KGNMAGVSDE-KIAIDLFK 377 (436)
T ss_pred cccCCHHHHHHHhCHHHHHHHHHhCceeEEEEEeccEEEEeeecHHHHHHhcChhhhcCC-cccccccCCC-CeEEEeee
Confidence 88999999999999999999999999999999999999999999999999999999997 7999999876 79999999
Q ss_pred EEEEEEEccCccccccccceeee-ecCCCEEEEcCceEEEEEECCCCcEEEEEEEcCCC
Q psy5102 252 HKVDIEVTEQGTVAAASTGIIIT-RISKPTVKINRPFIFFIYHKPTDSIVFWGSIYKPE 309 (357)
Q Consensus 252 qk~~iev~E~G~~aaa~t~~~~~-~s~~~~f~~nrPFlf~I~d~~t~~iLF~G~v~~P~ 309 (357)
|++.|+|||+|++|+|+|.+.+. ++.+.+|++||||+|+|+++.|+.|||+|+|.+|.
T Consensus 378 hka~IeVdE~GteAaa~T~~~~~~~~~~~~f~~drPFlf~I~d~~t~~iLF~G~v~~P~ 436 (436)
T cd02047 378 HQGTITVNEEGTEAAAVTTVGFMPLSTQVRFIVDRPFLFLIYEHRTNCLLFMGRVANPS 436 (436)
T ss_pred eeeEEEEcCCcccchhccccccccCCCCcEEEeeCCEEEEEEECCCCcEEEEEEecCCC
Confidence 99999999999999999976544 44557899999999999999999999999999994
No 12
>cd02045 antithrombin-III_like Antithrombin is a serine proteinase inhibitor (serpin) which controls the process of coagulation. It is the most important anticoagulant molecule in mammalian circulation systems, controlled by its interaction with the co-factor, heparin, which accelerates its interaction with target proteases, such as thrombin and factor Xa. This subgroup corresponds to clade C of the serpin superfamily.
Probab=100.00 E-value=3.7e-57 Score=444.50 Aligned_cols=295 Identities=25% Similarity=0.421 Sum_probs=255.7
Q ss_pred hHHHHhhHHHHHHHHHHHhccCCCCCEEEchhhHHHHHHHHHcCCCchhHHHHHHhhCCCc------h------hhHHhh
Q psy5102 11 ILRRGITQMTLDMERAIRSVMTKNQNVVFAPLSIVGALALVLLGSDGQTKDELTHFMGVAT------G------RSLSNK 78 (357)
Q Consensus 11 ~~~~~~~~Fa~~l~~~l~~~~~~~~N~v~SP~si~~aL~~l~~Ga~g~T~~eL~~~Lg~~~------~------~~ll~~ 78 (357)
.+..++++||++||+++.....+++|+|+||+||+.+|+|++.||.|.|++||.++||++. + +.+...
T Consensus 4 ~~~~~~~~Fa~~l~~~l~~~~~~~~Niv~SP~si~~aL~ml~~GA~g~T~~el~~~L~~~~~~~~~~~~~~~~~~~l~~~ 83 (381)
T cd02045 4 ELSKANSRFALAFYKHLADSKSNDENIFLSPLSISTAFAMTKLGACNNTLEQLMEVFQFDTISEKTSDQVHFFFAKLNCR 83 (381)
T ss_pred hhhhhhhHHHHHHHHHHhcccCCCCCEEECcHHHHHHHHHHhhhcCCcHHHHHHHHhCCCccccccHHHHHHHHHHHHHH
Confidence 4677899999999999975313678999999999999999999999999999999999963 1 222222
Q ss_pred c----c-cceeeee---eccc---------------------cCCH----HHH---HHHHH---hCCC-cccCCCCCCCc
Q psy5102 79 L----T-AHSLRRG---ITQM---------------------TLDM----ERA---IRSVM---TKNQ-NVVFAPLSIVG 118 (357)
Q Consensus 79 l----~-~~~l~~a---f~~~---------------------~~dF----~~a---IN~wv---T~g~-~~~l~~~~l~~ 118 (357)
+ + +..+.++ |+++ .+|| +.+ ||+|| |+|+ +++++++++++
T Consensus 84 ~~~~~~~~~~l~~an~l~~~~~~~l~~~f~~~~~~~y~~~~~~vdF~~~~~~~~~~IN~wv~~~T~g~I~~ll~~~~l~~ 163 (381)
T cd02045 84 LYRKANKSSELISANRLFGDKSLTFNETYQDISEIVYGAKLWPLDFKEKPELSRITINEWIANKTENRITDVIPEGAIDT 163 (381)
T ss_pred HhcccCCcchhhhhhhhhhcCCCchhHHHHHHHHHhhcCeeEEecCCCCHHHHHHHHHHHHHHHHhhHHHhhCCCCCCCC
Confidence 2 1 2344444 4443 5788 233 99999 9999 99998888999
Q ss_pred cceeEeecc-------cCCCCCCCceeeeeeec--------------c-cccccCCCCeEEEe--ecCCeEEEEEEec-C
Q psy5102 119 ALALVLLGS-------DGQTKDELTHFMGVATG--------------R-SLSNNPEAYASFLE--KMRNEVYMYFILP-K 173 (357)
Q Consensus 119 ~t~lvLvna-------~~~F~~~~T~~~~F~~~--------------~-~~~~~~~~~~~vve--y~~~~~sm~iiLP-~ 173 (357)
+|+++|+|| ++||++..|..++||.. . +|++.+++++++|+ |++++++|+|||| +
T Consensus 164 ~t~lvlvna~~Fkg~W~~~F~~~~T~~~~F~~~~g~~~~V~mM~~~~~~~y~~~~~~~~~~l~LPy~~~~~sm~iilP~~ 243 (381)
T cd02045 164 NTVLVLVNAIYFKGLWKSKFDKENTRKDLFHKAPGEKCPVPMMYQESKFRYAKIPEDKVQVLELPYKGDDITMVLILPKE 243 (381)
T ss_pred ccceeeEeeeEEeccccCCCCcccCcccccCcCCCcEEEEeccCccceeeeEecCCCCcEEEEeecCCCceEEEEEeCCC
Confidence 999999999 89999999999999986 1 56667889999999 9988999999999 8
Q ss_pred CCChhHHhhccChhHHHHHHHhcCceeEEEEeceeeEeeccchHHHhhhCCccccCCCCCCCCCCCCCC--CCceeeeee
Q psy5102 174 NPDLSEFTKDLDYDKFSRIIESTNKVDVIYTIPKMKVTSSTELRTVLNTMNVTSMFDVSKSDLSNMLDD--RGVAVDQVF 251 (357)
Q Consensus 174 ~~~L~~l~~~L~~~~l~~~~~~l~~~~v~l~lPkF~i~~~~dL~~~L~~lGl~~~F~~~~adfs~is~~--~~l~vs~v~ 251 (357)
..+|.++++.|+.+.+..|.++++.+.|+|.||||+++.++||+++|++||++++|++..|||++|+.+ .+++|++|+
T Consensus 244 ~~~l~~l~~~l~~~~l~~~~~~~~~~~v~v~lPkF~i~~~~~l~~~L~~lGi~~~F~~~~Adfs~i~~~~~~~l~vs~v~ 323 (381)
T cd02045 244 GTTLSEVEQNLTLDKLQGWLDAMKETTLAVQIPRFRVEDSFSVKEQLQKMGLEDLFSPENAKLPGIVAGGRTDLYVSDAF 323 (381)
T ss_pred CCCHHHHHHhcCHHHHHHHHHhCcCcEEEEECCCEEEeeEecHHHHHHHcCCcccCCCCCCCccccccCCCCCceeeccc
Confidence 899999999999999999999999999999999999999999999999999999999756999999853 479999999
Q ss_pred EEEEEEEccCccccccccceeee-ec---CCCEEEEcCceEEEEEECCCCcEEEEEEE
Q psy5102 252 HKVDIEVTEQGTVAAASTGIIIT-RI---SKPTVKINRPFIFFIYHKPTDSIVFWGSI 305 (357)
Q Consensus 252 qk~~iev~E~G~~aaa~t~~~~~-~s---~~~~f~~nrPFlf~I~d~~t~~iLF~G~v 305 (357)
|++.|+|||+|++|+|+|.+.+. ++ .+++|++||||+|+|+|+.|+.|||+|||
T Consensus 324 hka~ieV~E~GteAaaat~~~~~~~s~~~~~~~f~~nrPF~f~I~d~~t~~iLF~G~v 381 (381)
T cd02045 324 HKAFLEVNEEGSEASAATAVVITGRSLNINRIIFVANRPFLLFIREVAINAIIFMGRV 381 (381)
T ss_pred eeeEEEECCCCeehhhhhhhhhhhccCCCCCCEEEeeCCEEEEEEECCCCcEEEEEeC
Confidence 99999999999999999976554 44 23689999999999999999999999996
No 13
>cd02052 PEDF Pigment epithelium-derived factor (PEDF)_like. PEDF is non-inhibitory member of the Serpin superfamily. It exhibits neurotrophic, neuroprotective and antiangiogenic properties and is widely expressed in the developing and adult nervous systems. This subgroup corresponds to clade F1 of the serpin superfamily.
Probab=100.00 E-value=8.9e-57 Score=440.67 Aligned_cols=293 Identities=22% Similarity=0.346 Sum_probs=254.9
Q ss_pred chhHHHHhhHHHHHHHHHHHhccCCCCCEEEchhhHHHHHHHHHcCCCchhHHHHHHhhCCCc----h-----hhHHhhc
Q psy5102 9 NLILRRGITQMTLDMERAIRSVMTKNQNVVFAPLSIVGALALVLLGSDGQTKDELTHFMGVAT----G-----RSLSNKL 79 (357)
Q Consensus 9 ~~~~~~~~~~Fa~~l~~~l~~~~~~~~N~v~SP~si~~aL~~l~~Ga~g~T~~eL~~~Lg~~~----~-----~~ll~~l 79 (357)
-..+..+.++||++||+++... .+++|+++||+||+.+|+|++.||+|+|++||.++||++. . +++++.+
T Consensus 12 ~~~l~~~~~~Fa~~l~~~l~~~-~~~~Nvv~SP~si~~~L~ml~~GA~g~T~~ql~~~L~~~~~~~~~~~~~~~~l~~~l 90 (374)
T cd02052 12 RNKLAAAVSNFGYDLYRQQASR-DPTANVFLSPLSIATALSQLSLGAGERTESQIHRALYYDLLNDPELHDTYKDLLASL 90 (374)
T ss_pred HHHHHHHHHHHHHHHHHHHhcc-CCCCcEEEChHHHHHHHHHHHhccChHHHHHHHHHhCCCCCChHHHHHHHHHHHHHh
Confidence 3567789999999999999876 6789999999999999999999999999999999999863 1 3444444
Q ss_pred -c-cceeeee---eccc---------------------cCCH-H-HH--HHHHH---hCCC-cccCCCCCCCccceeEee
Q psy5102 80 -T-AHSLRRG---ITQM---------------------TLDM-E-RA--IRSVM---TKNQ-NVVFAPLSIVGALALVLL 125 (357)
Q Consensus 80 -~-~~~l~~a---f~~~---------------------~~dF-~-~a--IN~wv---T~g~-~~~l~~~~l~~~t~lvLv 125 (357)
. +..++.+ |+++ .+|| . .+ ||+|| |+|+ ++++++ ++++|+++|+
T Consensus 91 ~~~~~~l~~an~i~v~~~~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~~IN~wv~~~T~g~I~~~l~~--i~~~t~l~lv 168 (374)
T cd02052 91 TAPAKGLKSASRILLERKLRLRLEFVNQVEKSYGERPRILAGNALDLQEINDWVQQQTGGKVDRFVKE--IPRNVSILLL 168 (374)
T ss_pred cCCCccchhhhHHHHhCCCchhHHHHHHHHHHhhCccccccCCHHHHHHHHHHHHHhhcCcHHHhCCC--CCCccceEEE
Confidence 2 2334444 5443 4566 3 23 99999 9999 999975 9999999999
Q ss_pred cc-------cCCCCCCCceeeeeeec---------------c-cccccCCCCeEEEe--ecCCeEEEEEEec-CCC-Chh
Q psy5102 126 GS-------DGQTKDELTHFMGVATG---------------R-SLSNNPEAYASFLE--KMRNEVYMYFILP-KNP-DLS 178 (357)
Q Consensus 126 na-------~~~F~~~~T~~~~F~~~---------------~-~~~~~~~~~~~vve--y~~~~~sm~iiLP-~~~-~L~ 178 (357)
|| ..||++..|..++||.. . +|++.+++++++|+ |++ ++||+|||| +.. +|.
T Consensus 169 Na~yFkg~W~~~F~~~~T~~~~F~~~~~~~~~V~mM~~~~~~~~y~~~~~~~~~vveLPy~~-~~sm~iiLP~~~~~~L~ 247 (374)
T cd02052 169 GSAYFKGQWITKFDKRNTVLTDFHLDEQRTVVVPMMSDPNAPVRYGLDSDLNCKIAQLPLTG-GVSIMFFLPDKVTQNLT 247 (374)
T ss_pred eeEEEechhcCCCCcccCccccEEcCCCcEEEEEeeccCCcceeeEEcCCCCcEEEEEecCC-CeEEEEEecCCCCCCHH
Confidence 99 89999999999999987 1 45667888999999 876 599999999 653 799
Q ss_pred HHhhccChhHHHHHHHhcCceeEEEEeceeeEeeccchHHHhhhCCccccCCCCCCCCCCCCCCCCceeeeeeEEEEEEE
Q psy5102 179 EFTKDLDYDKFSRIIESTNKVDVIYTIPKMKVTSSTELRTVLNTMNVTSMFDVSKSDLSNMLDDRGVAVDQVFHKVDIEV 258 (357)
Q Consensus 179 ~l~~~L~~~~l~~~~~~l~~~~v~l~lPkF~i~~~~dL~~~L~~lGl~~~F~~~~adfs~is~~~~l~vs~v~qk~~iev 258 (357)
.+++.|+.+.+..|.++++.+.|+|.||||+++.++||+++|++||++++|+. |||++|+++ +++|++|+|++.|+|
T Consensus 248 ~l~~~l~~~~~~~~~~~~~~~~v~v~lPKF~i~~~~~l~~~L~~lGl~~~F~~--adfs~i~~~-~l~v~~v~hk~~ieV 324 (374)
T cd02052 248 LIEESLTSEFVHDIDRELKTVKAVLTLPKLKLSYETELLPSLQELKLQSLFAS--PDFTKITSK-PIKLSHVHHKAVLEL 324 (374)
T ss_pred HHHhhcCHHHHHHHHHhCeEEEEEEECccEEEEEEechHHHHHhcCCcccccc--cchhhcccc-ceEeEeeEEEEEEEE
Confidence 99999999999999999999999999999999999999999999999999984 999999875 799999999999999
Q ss_pred ccCccccccccceeeeecCCCEEEEcCceEEEEEECCCCcEEEEEEEcCC
Q psy5102 259 TEQGTVAAASTGIIITRISKPTVKINRPFIFFIYHKPTDSIVFWGSIYKP 308 (357)
Q Consensus 259 ~E~G~~aaa~t~~~~~~s~~~~f~~nrPFlf~I~d~~t~~iLF~G~v~~P 308 (357)
||+|++|+|+|.....++.+.+|++||||+|+|+|+.||.|||+|+|.+|
T Consensus 325 dE~Gt~aaa~t~~~~~~~~~~~f~~drPFlf~I~~~~t~~iLF~G~v~~P 374 (374)
T cd02052 325 NEDGAETAPTPGSATALTFPLEYHVDRPFLFVLRDEDTGALLFIGKVLDP 374 (374)
T ss_pred CCCccccccccccccccCCCeEEEeeCCEEEEEEECCCCcEEEEEEecCC
Confidence 99999999999764433456789999999999999999999999999998
No 14
>PHA02948 serine protease inhibitor-like protein; Provisional
Probab=100.00 E-value=1.5e-56 Score=438.22 Aligned_cols=292 Identities=21% Similarity=0.328 Sum_probs=248.2
Q ss_pred HHHHhhHHHHHHHHHHHhccCCCCCEEEchhhHHHHHHHHHcCCCchhHHHHHHhhCCCch------hhHHhhc-c----
Q psy5102 12 LRRGITQMTLDMERAIRSVMTKNQNVVFAPLSIVGALALVLLGSDGQTKDELTHFMGVATG------RSLSNKL-T---- 80 (357)
Q Consensus 12 ~~~~~~~Fa~~l~~~l~~~~~~~~N~v~SP~si~~aL~~l~~Ga~g~T~~eL~~~Lg~~~~------~~ll~~l-~---- 80 (357)
...+.++||++||+++... ++++|+++||+||+.+|+|++.||+|+|++||.++||++.+ +++++.+ .
T Consensus 17 ~~~~~~~f~~~l~~~l~~~-~~~~Nv~~SP~Si~~aL~ml~~GA~G~T~~el~~~L~~~~~~~~~~~~~l~~~~~~~~~~ 95 (373)
T PHA02948 17 RLQGFTNAGILAYKNIQDG-NEDDNIVFSPFGYSFSMFMSLLPASGNTRVELLKTMDLRKRDLGPAFTELISGLAKLKTS 95 (373)
T ss_pred hhccchHHHHHHHHHHHhc-CCCCCEEEchHHHHHHHHHHHhccCCcHHHHHHHHhCCCchhHHHHHHHHHHHHhccccc
Confidence 3447899999999999876 67899999999999999999999999999999999999762 3343333 1
Q ss_pred ccee-eee---eccc------------------cCCH-HHH---HHHHH-hCCC-cccCCCCCCCccceeEeecc-----
Q psy5102 81 AHSL-RRG---ITQM------------------TLDM-ERA---IRSVM-TKNQ-NVVFAPLSIVGALALVLLGS----- 127 (357)
Q Consensus 81 ~~~l-~~a---f~~~------------------~~dF-~~a---IN~wv-T~g~-~~~l~~~~l~~~t~lvLvna----- 127 (357)
+..+ ..+ |+++ .+|| +++ ||+|| ...+ ++++++++++++|+++|+||
T Consensus 96 ~~~~~~~an~~~v~~~~~~~~~f~~~~~~~~v~~vdF~~~a~~~IN~WV~~~T~I~~~~~~~~i~~~t~lvLvNaiyFkg 175 (373)
T PHA02948 96 KYTYTDLTYQSFVDNTVCIKPSYYQQYHRFGLYRLNFRRDAVNKINSIVERRSGMSNVVDSTMLDNNTLWAIINTIYFKG 175 (373)
T ss_pred CcchHHHHHHHHHhcCCCccHHHHHHHhhCceEecCccHHHHHHHHHHHHhcCCCcccCCCCCCCCCceEEEEEEEEEee
Confidence 1221 222 4332 5788 434 99999 3347 89998888999999999999
Q ss_pred --cCCCCCCCceeeeeeec-----------c-c----ccccCCCCeEEEe--ecCCeEEEEEEecCCCChhHHhhccChh
Q psy5102 128 --DGQTKDELTHFMGVATG-----------R-S----LSNNPEAYASFLE--KMRNEVYMYFILPKNPDLSEFTKDLDYD 187 (357)
Q Consensus 128 --~~~F~~~~T~~~~F~~~-----------~-~----~~~~~~~~~~vve--y~~~~~sm~iiLP~~~~L~~l~~~L~~~ 187 (357)
+.||++..|.+++||.. . . |.+.++.++++++ |+++++||+||||+ ++.++++.|+.+
T Consensus 176 ~W~~~F~~~~T~~~~F~~~~~~~~V~mM~~~~~~~~~~~~~~~~~~~vl~LPY~~~~~sM~iiLP~--~l~~l~~~l~~~ 253 (373)
T PHA02948 176 TWQYPFDITKTHNASFTNKYGTKTVPMMNVVTKLQGNTITIDDEEYDMVRLPYKDANISMYLAIGD--NMTHFTDSITAA 253 (373)
T ss_pred eecCCCCcccCeeceeEeCCCCEEchhheeccccccceeeccCcCceEEEEecCCCcEEEEEEcCC--cHHHHHHHhCHH
Confidence 89999999999999966 1 1 2345778899999 99889999999993 388999999999
Q ss_pred HHHHHHHhcCceeEEEEeceeeEeeccchHHHhhhCCccccCCCCCCCCCCCCCCCCceeeeeeEEEEEEEccCcccccc
Q psy5102 188 KFSRIIESTNKVDVIYTIPKMKVTSSTELRTVLNTMNVTSMFDVSKSDLSNMLDDRGVAVDQVFHKVDIEVTEQGTVAAA 267 (357)
Q Consensus 188 ~l~~~~~~l~~~~v~l~lPkF~i~~~~dL~~~L~~lGl~~~F~~~~adfs~is~~~~l~vs~v~qk~~iev~E~G~~aaa 267 (357)
.+..|.++++.+.|+|+||||++++++||+++|+ +|++++|+++.|||++|+++ +++|++|+||+.|+|||+|++|+|
T Consensus 254 ~l~~~~~~~~~~~v~v~lPKFki~~~~~L~~~L~-~~i~~~F~~~~Adfs~is~~-~l~vs~v~hka~IeVdE~GteAaA 331 (373)
T PHA02948 254 KLDYWSSQLGNKVYNLKLPRFSIENKRDIKSIAE-MMAPSMFNPDNASFKHMTRD-PLYIYKMFQNAKIDVDEQGTVAEA 331 (373)
T ss_pred HHHHHHHhCcceEEEEEeeCEeeeeeccHHHHHH-hhhHhhCCCCcCchhhhccC-ceEEEeeEEEEEEEECCCceEEee
Confidence 9999998999999999999999999999999995 67999998646999999865 799999999999999999999999
Q ss_pred ccceeee-ecCCCEEEEcCceEEEEEECCCCcEEEEEEEcCC
Q psy5102 268 STGIIIT-RISKPTVKINRPFIFFIYHKPTDSIVFWGSIYKP 308 (357)
Q Consensus 268 ~t~~~~~-~s~~~~f~~nrPFlf~I~d~~t~~iLF~G~v~~P 308 (357)
+|.+... ++.+.+|++||||+|+|+|+.||.|||+|+|.+|
T Consensus 332 aT~~~~~~~~~~~~f~~drPFlf~I~~~~t~~iLF~G~v~~P 373 (373)
T PHA02948 332 STIMVATARSSPEELEFNTPFVFIIRHDITGFILFMGKVESP 373 (373)
T ss_pred cceeeeeccCCCCeEEeeCCEEEEEEECCCCcEEEEEEecCC
Confidence 9986554 4456689999999999999999999999999998
No 15
>cd02056 alpha-1-antitrypsin_like alpha-1-antitrypsin_like. This family contains a variety of different members of clade A of the serpin superfamily. They include the classical serine proteinase inhibitors, alpha-1-antitrypsin and alpha-1-antichymotrypsin, protein C inhibitor, kallistatin, and noninhibitory serpins, like corticosteroid and thyroxin binding globulins. In general, SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia.
Probab=100.00 E-value=1.4e-56 Score=437.69 Aligned_cols=285 Identities=26% Similarity=0.429 Sum_probs=251.5
Q ss_pred HhhHHHHHHHHHHHhccCCCCCEEEchhhHHHHHHHHHcCCCchhHHHHHHhhCCCc------h-----hhHHhhc---c
Q psy5102 15 GITQMTLDMERAIRSVMTKNQNVVFAPLSIVGALALVLLGSDGQTKDELTHFMGVAT------G-----RSLSNKL---T 80 (357)
Q Consensus 15 ~~~~Fa~~l~~~l~~~~~~~~N~v~SP~si~~aL~~l~~Ga~g~T~~eL~~~Lg~~~------~-----~~ll~~l---~ 80 (357)
++++|+++||+.+... .+++|+|+||+||+.+|+|++.||+|+|++||.++||++. + +++++.+ .
T Consensus 1 ~~~~F~~~l~~~~~~~-~~~~N~v~SP~si~~~L~ml~~GA~g~T~~el~~~L~~~~~~~~~~~~~~~~~~l~~~l~~~~ 79 (361)
T cd02056 1 ANADFAFRLYRQLASE-SPSKNIFFSPVSISTALAMLSLGARSSTLAQILEGLGFNLTEISEEEIHQGFQHLLHLLNQPD 79 (361)
T ss_pred CccHHHHHHHHHHhhc-CCCCcEEEChHHHHHHHHHHHCccchhHHHHHHHHhcCCccCCCHHHHHHHHHHHHHHHcCCC
Confidence 4689999999999876 6789999999999999999999999999999999999964 1 3444444 1
Q ss_pred -cceeeee---eccc---------------------cCCH---HHH---HHHHH---hCCC-cccCCCCCCCccceeEee
Q psy5102 81 -AHSLRRG---ITQM---------------------TLDM---ERA---IRSVM---TKNQ-NVVFAPLSIVGALALVLL 125 (357)
Q Consensus 81 -~~~l~~a---f~~~---------------------~~dF---~~a---IN~wv---T~g~-~~~l~~~~l~~~t~lvLv 125 (357)
+..++++ |+++ .+|| +.+ ||+|| |+|+ +++++. ++++++++++
T Consensus 80 ~~~~l~~an~l~~~~~~~~~~~f~~~~~~~y~~~~~~~dF~~~~~~~~~IN~wv~~~T~g~I~~~~~~--i~~~t~lvlv 157 (361)
T cd02056 80 SGLQLNMGNALFLDKRLKPLDKFLEDVKHLYESEAFSTDFQDSAEAKKQINDYVEKKTHGKIVDLVKD--LDSDTVMVLV 157 (361)
T ss_pred CcceEEeeeehhhhCCCChhHHHHHHHHHHhcCceEeeCCCChHHHHHHHHHHHHHHhhhhHHhhcCC--CCCCceEEEE
Confidence 4455555 5543 5788 233 99999 9999 999974 9999999999
Q ss_pred cc-------cCCCCCCCceeeeeeec--------------c-cccccCCCCeEEEe--ecCCeEEEEEEec-CCCChhHH
Q psy5102 126 GS-------DGQTKDELTHFMGVATG--------------R-SLSNNPEAYASFLE--KMRNEVYMYFILP-KNPDLSEF 180 (357)
Q Consensus 126 na-------~~~F~~~~T~~~~F~~~--------------~-~~~~~~~~~~~vve--y~~~~~sm~iiLP-~~~~L~~l 180 (357)
|| +.||++..|..++||.. . +|++.+++++++|+ |++ +++|+|||| +. +|.++
T Consensus 158 na~~Fk~~W~~~F~~~~T~~~~F~~~~~~~~~V~mM~~~~~~~y~~~~~l~~~~veLPy~~-~~sm~iiLP~~~-~l~~l 235 (361)
T cd02056 158 NYIYFKGKWEKPFDPELTQEEDFFVDEKTTVKVPMMHQTGRYDYLHDSELSCTVVQMPYKG-NATAFFVLPDEG-KMKQV 235 (361)
T ss_pred EEEeeeehccCCCCcccCcccCCEeCCCcEEEeecccccCcEeeEEcCCCCcEEEEEecCC-CcEEEEEecCcc-hHHHH
Confidence 99 89999999999999976 1 56677788999999 876 499999999 65 89999
Q ss_pred hhccChhHHHHHHHhcCceeEEEEeceeeEeeccchHHHhhhCCccccCCCCCCCCCCCCCCCCceeeeeeEEEEEEEcc
Q psy5102 181 TKDLDYDKFSRIIESTNKVDVIYTIPKMKVTSSTELRTVLNTMNVTSMFDVSKSDLSNMLDDRGVAVDQVFHKVDIEVTE 260 (357)
Q Consensus 181 ~~~L~~~~l~~~~~~l~~~~v~l~lPkF~i~~~~dL~~~L~~lGl~~~F~~~~adfs~is~~~~l~vs~v~qk~~iev~E 260 (357)
++.|+.+.+..|.+.++++.|+|+||||++++++||+++|++||++++|+. .|||++|+++.+++|++|+|++.|+|||
T Consensus 236 ~~~l~~~~l~~~~~~~~~~~v~v~lPkF~i~~~~~l~~~L~~~Gi~~~F~~-~adfs~i~~~~~l~vs~v~qk~~iev~E 314 (361)
T cd02056 236 EAALSRDTLKKWSKLLSKRSVDLYLPKFSISGTYNLKDILPKMGITDVFSD-KADLSGITEQPNLKVSKAVHKAVLDVDE 314 (361)
T ss_pred HHhhCHHHHHHHHHhCceeEEEEEeeeEEEeeeechHHHHHhcChhhhcCC-cCCccccCCCCCEEEEeeeeeeEEEEcC
Confidence 999999999999999999999999999999999999999999999999987 7999999986689999999999999999
Q ss_pred Cccccccccceeee-ec-CCCEEEEcCceEEEEEECCCCcEEEEEEE
Q psy5102 261 QGTVAAASTGIIIT-RI-SKPTVKINRPFIFFIYHKPTDSIVFWGSI 305 (357)
Q Consensus 261 ~G~~aaa~t~~~~~-~s-~~~~f~~nrPFlf~I~d~~t~~iLF~G~v 305 (357)
+|++|+|+|.+... ++ .+.+|++||||+|+|+|+.|+.|||+|+|
T Consensus 315 ~Gt~aaa~t~~~~~~~~~~~~~f~~drPF~f~I~~~~t~~iLF~G~v 361 (361)
T cd02056 315 KGTEAAAATGVEITPMSALPPILKFNRPFLLLIFDRTTESILFLGKV 361 (361)
T ss_pred CCcccccccchhhhcccCCCCEEEEeCCEEEEEEECCCCcEEEEEeC
Confidence 99999999987555 44 56789999999999999999999999996
No 16
>PF00079 Serpin: Serpin (serine protease inhibitor); InterPro: IPR023796 Peptide proteinase inhibitors can be found as single domain proteins or as single or multiple domains within proteins; these are referred to as either simple or compound inhibitors, respectively. In many cases they are synthesised as part of a larger precursor protein, either as a prepropeptide or as an N-terminal domain associated with an inactive peptidase or zymogen. This domain prevents access of the substrate to the active site. Removal of the N-terminal inhibitor domain either by interaction with a second peptidase or by autocatalytic cleavage activates the zymogen. Other inhibitors interact direct with proteinases using a simple noncovalent lock and key mechanism; while yet others use a conformational change-based trapping mechanism that depends on their structural and thermodynamic properties. Serpins (SERine Proteinase INhibitors) [, , ] belong to MEROPS inhibitor family I4, clan ID. Serpins are proteins that are primarily known as irreversible serine protease inhibitors active against S1 (IPR001254 from INTERPRO), S8 (IPR000209 from INTERPRO) and C14 (IPR002398 from INTERPRO) peptidases. There are both extra- and intra-cellular serpins, which are found in all groups of organisms with the notable exception of fungi [, ]. In contrast to "rigid" proteinase inhibitors, such as those of the Kunitz or Kazal families, the serpins are metastable proteins (active-state proteins) which interact with their substrate and irreversibly trap the acyl intermediate as a result of a major conformational change []; they are best described as suicide substrate inhibitors. The common structure of these proteins is a multi-domain fold containing a bundle of 8 or 9 alpha helices and a beta sandwich formed by 3 beta sheets. The reactive centre loop (RCL) is found in the C-terminal part of these proteins. Serpins and their homologues are a group of high molecular weight (40 to 50 kDa) structurally related proteins involved in a number of fundamental biological processes such as blood coagulation, complement activation, fibrinolysis, angiogenesis, inflammation, tumour suppression and hormone transport. All known serpins have been classified into 16 clades and 10 orphan sequences; the vertebrate serpins can be conveniently classified into six sub-groups []. In human plasma they represent approximately 2% of the total protein, of which 70% is alpha-1-antitrypsin. On the basis of strong sequence similarities, a number of proteins with no known inhibitory activity also belong to this family, these include: angiotensinogen, corticosteroid-binding globulin and thyroxin-binding globulin []. This entry represents the structural domain of serpins. It consists of a cluster of helices and a beta-sandwich.; PDB: 3PZF_A 3B9F_I 1MTP_A 1SNG_A 1ANT_I 2ZNH_B 1BR8_I 1SR5_A 1E03_L 1AZX_L ....
Probab=100.00 E-value=4.1e-56 Score=434.96 Aligned_cols=293 Identities=29% Similarity=0.473 Sum_probs=258.9
Q ss_pred HHhhHHHHHHHHHHHhccCCCCCEEEchhhHHHHHHHHHcCCCchhHHHHHHhhCCCc--h-------hhHHhhc----c
Q psy5102 14 RGITQMTLDMERAIRSVMTKNQNVVFAPLSIVGALALVLLGSDGQTKDELTHFMGVAT--G-------RSLSNKL----T 80 (357)
Q Consensus 14 ~~~~~Fa~~l~~~l~~~~~~~~N~v~SP~si~~aL~~l~~Ga~g~T~~eL~~~Lg~~~--~-------~~ll~~l----~ 80 (357)
+++++||++||+.+.+. .+++|+|+||+||+.+|+|++.||+|+|++||.++||++. . +.+++.+ .
T Consensus 1 ~a~~~f~~~L~~~~~~~-~~~~N~v~SP~si~~~L~~l~~ga~g~T~~el~~~L~~~~~~~~~~~~~~~~l~~~l~~~~~ 79 (371)
T PF00079_consen 1 AANNQFALKLFKALSKS-NPDENFVFSPLSIYSALAMLYLGASGETRKELRKVLGLPGSDDEEIHEYFKKLLQSLNSSPS 79 (371)
T ss_dssp HHHHHHHHHHHHHHHHH-STTSSEEE-HHHHHHHHHHHHHTSCHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHHSCST
T ss_pred ChHHHHHHHHHHHHHhh-CCCCcEEEChHHHHHHHHHHHhhccCCHHHHHHHHhhhcccccccchhhhhhhhhhhhcccc
Confidence 47899999999999988 6799999999999999999999999999999999999974 1 3344444 1
Q ss_pred -cceeeee---eccc---------------------cCCH---HHH---HHHHH---hCCC-cccCCCCCCCccceeEee
Q psy5102 81 -AHSLRRG---ITQM---------------------TLDM---ERA---IRSVM---TKNQ-NVVFAPLSIVGALALVLL 125 (357)
Q Consensus 81 -~~~l~~a---f~~~---------------------~~dF---~~a---IN~wv---T~g~-~~~l~~~~l~~~t~lvLv 125 (357)
+..++.+ |+++ .+|| .++ ||+|+ |+|+ +++++++++++++.++|+
T Consensus 80 ~~~~~~~~~~l~~~~~~~~~~~f~~~~~~~~~~~~~~~df~~~~~~~~~IN~wv~~~T~g~I~~~v~~~~i~~~t~~vli 159 (371)
T PF00079_consen 80 DNPQLKLANKLFVDKNLPLKPEFKKTLKKYFNAEVESVDFSDPPQAAKEINKWVSEKTNGKIKNLVSPNDIDPDTRLVLI 159 (371)
T ss_dssp SSSEEEEEEEEEEETTSEBEHHHHHHHHHHHSEEEEEEETTSHHHHHHHHHHHHHHHTTTSSSTSSSTTSSSTTEEEEEE
T ss_pred ccccceeeeeeecccccccccccchhhhhccccccccccccccchhhhhhcchhhhhccceeeccccccchhhHHHHhhc
Confidence 4555555 6554 5788 223 99999 9999 999999999999999999
Q ss_pred cc-------cCCCCCCCceeeeeeec--------------c-cccccCCCCeEEEe--ecCCeEEEEEEec-CCCChhHH
Q psy5102 126 GS-------DGQTKDELTHFMGVATG--------------R-SLSNNPEAYASFLE--KMRNEVYMYFILP-KNPDLSEF 180 (357)
Q Consensus 126 na-------~~~F~~~~T~~~~F~~~--------------~-~~~~~~~~~~~vve--y~~~~~sm~iiLP-~~~~L~~l 180 (357)
|| +.||++..|..++||.. . +|.+.+++++++|+ |.+ +++|+|||| +..+|.++
T Consensus 160 na~~f~~~W~~~F~~~~t~~~~F~~~~g~~~~v~mM~~~~~~~~~~~~~l~~~~v~Lp~~~-~~sm~iilP~~~~~l~~l 238 (371)
T PF00079_consen 160 NAIYFKGKWKYPFDPENTEKRPFYVSDGKSVSVPMMHQSGRFRYAEDEDLDAQVVELPYKG-NFSMLIILPDEGDGLDEL 238 (371)
T ss_dssp EEEEEEEEBSSTEEGGGEEEEEEECSSSEEEEEEEEEEEEEEEEEEETTTTEEEEEEEBST-SEEEEEEEESSTTTHHHH
T ss_pred ccccccccccccccccccccccccccccccceEEEEecccccccccccccceeEEEecccc-ceeeEEEEeccccchhhh
Confidence 99 88999999999999976 2 66677888999999 877 799999999 88899999
Q ss_pred hhccChhHHHHHHHhcCceeEE--EEeceeeEeeccchHHHhhhCCccccCCCCCCCCCCCCCCCCceeeeeeEEEEEEE
Q psy5102 181 TKDLDYDKFSRIIESTNKVDVI--YTIPKMKVTSSTELRTVLNTMNVTSMFDVSKSDLSNMLDDRGVAVDQVFHKVDIEV 258 (357)
Q Consensus 181 ~~~L~~~~l~~~~~~l~~~~v~--l~lPkF~i~~~~dL~~~L~~lGl~~~F~~~~adfs~is~~~~l~vs~v~qk~~iev 258 (357)
+++|+.+.+..|.++++.+.++ |.||||++++++||+++|++||++++|++..|||++|+++.+++|++++|++.|+|
T Consensus 239 ~~~l~~~~l~~~~~~~~~~~~~~~l~lPkf~i~~~~dl~~~L~~lGi~~~F~~~~adfs~i~~~~~~~v~~v~qk~~i~v 318 (371)
T PF00079_consen 239 EKKLTSERLQEIISNLKMRKVDEELSLPKFKIESSIDLKELLKKLGIKDLFDPDSADFSGISDDEPLYVSDVIQKAVIEV 318 (371)
T ss_dssp HHHHSHHHHHHHHHHCEEEEEEEEEEEEEEEEEEEEEHHHHHHHTTTTGGGSTTTSSCTTTBSSSTEEEEEEEEEEEEEE
T ss_pred hhhcccccccccccccccccccceeeecccccccccccceeeehhhcccccccccccccccccceeeeeeeccceeeecc
Confidence 9999999999999999999998 99999999999999999999999999994479999999777999999999999999
Q ss_pred ccCccccccccceeee---ecCCCEEEEcCceEEEEEECCCCcEEEEEEEcCC
Q psy5102 259 TEQGTVAAASTGIIIT---RISKPTVKINRPFIFFIYHKPTDSIVFWGSIYKP 308 (357)
Q Consensus 259 ~E~G~~aaa~t~~~~~---~s~~~~f~~nrPFlf~I~d~~t~~iLF~G~v~~P 308 (357)
||+|++|+++|.+... ...+.+|++||||+|+|+|+.+|.|||+|+|.+|
T Consensus 319 ~E~G~~a~a~t~~~~~~~~~~~~~~f~~drPF~f~I~~~~t~~iLF~G~v~~P 371 (371)
T PF00079_consen 319 DEEGTEAAAATAVMASISSPPPPIEFIADRPFLFFIRDRSTGSILFMGKVVDP 371 (371)
T ss_dssp ESSEEEEEEEEEEEEEESSSSSSEEEECSSEEEEEEEETTTTEEEEEEEESST
T ss_pred ccccccccccccccccccccccCcEEEEcCCEEEEEEECCCCcEEEEEEecCC
Confidence 9999999999943111 2267899999999999999999999999999998
No 17
>cd00172 SERPIN SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia.
Probab=100.00 E-value=2.7e-56 Score=435.92 Aligned_cols=288 Identities=31% Similarity=0.505 Sum_probs=257.1
Q ss_pred hhHHHHHHHHHHHhccCCCCCEEEchhhHHHHHHHHHcCCCchhHHHHHHhhCCCc--h-------hhHHhhc---c-cc
Q psy5102 16 ITQMTLDMERAIRSVMTKNQNVVFAPLSIVGALALVLLGSDGQTKDELTHFMGVAT--G-------RSLSNKL---T-AH 82 (357)
Q Consensus 16 ~~~Fa~~l~~~l~~~~~~~~N~v~SP~si~~aL~~l~~Ga~g~T~~eL~~~Lg~~~--~-------~~ll~~l---~-~~ 82 (357)
+++||++||+++... ++++|+|+||+||+.+|+|++.||+|+|++||.++||++. . +.+++.+ . +.
T Consensus 2 ~~~Fa~~l~~~~~~~-~~~~N~v~SP~si~~aL~~l~~Ga~g~T~~el~~~L~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 80 (364)
T cd00172 2 NNDFALDLYKQLAKS-EPDENVVFSPLSIASALALLYLGAGGETREQLRKVLGLPSLDDEDVHQAFKSLLSSLKDSEKGV 80 (364)
T ss_pred cchHHHHHHHHHhhc-CCCCCEEEcHHHHHHHHHHHhhhcCchHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHhCCCCCc
Confidence 578999999999876 5789999999999999999999999999999999999984 1 3444444 1 34
Q ss_pred eeeee---eccc---------------------cCCH---HHH---HHHHH---hCCC-cccCCCCCCCccceeEeecc-
Q psy5102 83 SLRRG---ITQM---------------------TLDM---ERA---IRSVM---TKNQ-NVVFAPLSIVGALALVLLGS- 127 (357)
Q Consensus 83 ~l~~a---f~~~---------------------~~dF---~~a---IN~wv---T~g~-~~~l~~~~l~~~t~lvLvna- 127 (357)
.++++ |+++ .+|| +.+ ||+|| |+|+ ++++++++++++++++|+||
T Consensus 81 ~l~~an~~~~~~~~~~~~~f~~~~~~~~~~~~~~~dF~~~~~a~~~IN~wv~~~T~g~I~~~~~~~~i~~~t~l~lvnai 160 (364)
T cd00172 81 ELKLANRLFVQKGLTVKEDFLDLAKKYYDAEVESVDFANPEAAAAQINNWVEEKTNGKIKDLLSPDALDPDTRLVLVNAI 160 (364)
T ss_pred eeeeehhhhhhCCCchhHHHHHHHHHHhcCeeEEEcCCChHHHHHHHHHHHHhhhcccchhhCCCCCCCcccceeeeehe
Confidence 56665 6554 5788 333 99999 9999 99999888999999999999
Q ss_pred ------cCCCCCCCceeeeeeec--------------c-cccccCCCCeEEEe--ecCCeEEEEEEec-CCCChhHHhhc
Q psy5102 128 ------DGQTKDELTHFMGVATG--------------R-SLSNNPEAYASFLE--KMRNEVYMYFILP-KNPDLSEFTKD 183 (357)
Q Consensus 128 ------~~~F~~~~T~~~~F~~~--------------~-~~~~~~~~~~~vve--y~~~~~sm~iiLP-~~~~L~~l~~~ 183 (357)
+.||++..|..++||.. . +|++.+++++++|+ |++++++|+|||| +..+|.+++++
T Consensus 161 ~Fkg~W~~~F~~~~T~~~~F~~~~~~~~~V~mM~~~~~~~y~~~~~l~~~vv~lpy~~~~~sm~iilP~~~~~l~~l~~~ 240 (364)
T cd00172 161 YFKGKWKTPFDPELTRKRPFYVSEGESVQVPMMYQTGKFRYAEDEELDAQVLELPYKGSDLSMLIILPKEVTGLAELEEK 240 (364)
T ss_pred eeeeccCCCCChhhceecccEeCCCcEEEEeCccccCcEEEEEcCccCcEEEEeecCCCceEEEEEecCCCCcHHHHHHh
Confidence 89999999999999986 2 66667778999999 9988999999999 88899999999
Q ss_pred cChhHHHHHHHhcCceeEEEEeceeeEeeccchHHHhhhCCccccCCCCCCCCCCCCCCCCceeeeeeEEEEEEEccCcc
Q psy5102 184 LDYDKFSRIIESTNKVDVIYTIPKMKVTSSTELRTVLNTMNVTSMFDVSKSDLSNMLDDRGVAVDQVFHKVDIEVTEQGT 263 (357)
Q Consensus 184 L~~~~l~~~~~~l~~~~v~l~lPkF~i~~~~dL~~~L~~lGl~~~F~~~~adfs~is~~~~l~vs~v~qk~~iev~E~G~ 263 (357)
|+.+.+..|.++++.+.|+|+||||++++++||+++|++||++.+|+. .|+|++++.+.+++|++|+|++.|+|||+|+
T Consensus 241 l~~~~l~~~~~~~~~~~v~l~lPkF~i~~~~~l~~~L~~~Gl~~~F~~-~a~~~~~~~~~~l~v~~v~hk~~ievdE~Gt 319 (364)
T cd00172 241 LSAEKLDDLLSNLKEREVEVTLPKFKIESSLDLKEVLQALGITDLFSP-SADLSSISSDEPLYVSKVIHKAFIEVNEEGT 319 (364)
T ss_pred cCHHHHHHHHHhCCeEEEEEEeeEEEEeeeeCcHHHHHHcCCccccCC-ccccccCCCCCCeEEEeeeeeeEEEECCCce
Confidence 999999999999999999999999999999999999999999999998 7999999877789999999999999999999
Q ss_pred ccccccceeeee---cCCCEEEEcCceEEEEEECCCCcEEEEEEE
Q psy5102 264 VAAASTGIIITR---ISKPTVKINRPFIFFIYHKPTDSIVFWGSI 305 (357)
Q Consensus 264 ~aaa~t~~~~~~---s~~~~f~~nrPFlf~I~d~~t~~iLF~G~v 305 (357)
+|+++|.+.... ..+.+|++||||+|+|+|+.|+.|||+|+|
T Consensus 320 ~aaa~t~~~~~~~~~~~~~~f~~drPF~f~I~~~~t~~iLF~G~v 364 (364)
T cd00172 320 EAAAATAVSIVPRRPSPPVEFKADRPFLFLIRDDTTGTILFLGRV 364 (364)
T ss_pred ehhcccceeeccccCCCCCEEEEECCEEEEEEECCCCeEEEEEEC
Confidence 999999876542 256789999999999999999999999996
No 18
>smart00093 SERPIN SERine Proteinase INhibitors.
Probab=100.00 E-value=2.6e-56 Score=435.35 Aligned_cols=282 Identities=30% Similarity=0.497 Sum_probs=248.2
Q ss_pred HHHHHHHHhccCCCCCEEEchhhHHHHHHHHHcCCCchhHHHHHHhhCCCch-----------hhHHhhc---c-cceee
Q psy5102 21 LDMERAIRSVMTKNQNVVFAPLSIVGALALVLLGSDGQTKDELTHFMGVATG-----------RSLSNKL---T-AHSLR 85 (357)
Q Consensus 21 ~~l~~~l~~~~~~~~N~v~SP~si~~aL~~l~~Ga~g~T~~eL~~~Lg~~~~-----------~~ll~~l---~-~~~l~ 85 (357)
++||+.+... ++++|+|+||+||+.+|+|++.||+|+|++||.++||++.. +.+++.+ + +..++
T Consensus 1 ~~l~~~l~~~-~~~~N~v~SP~si~~~L~ml~~GA~g~T~~el~~~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~l~ 79 (359)
T smart00093 1 FDLYKELAKE-SPDKNIFFSPVSISSALAMLSLGAKGSTATQILEVLGFNLTELSEADIHQGFQHLLQLLNRPDSQLELK 79 (359)
T ss_pred ChHHHHHhcc-CCCCeEEEChHHHHHHHHHHHcccCchHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhCCCCcceEE
Confidence 3689999876 67899999999999999999999999999999999999751 2344444 1 34566
Q ss_pred ee---eccc---------------------cCCH----HHH---HHHHH---hCCC-cccCCCCCCCccceeEeecc---
Q psy5102 86 RG---ITQM---------------------TLDM----ERA---IRSVM---TKNQ-NVVFAPLSIVGALALVLLGS--- 127 (357)
Q Consensus 86 ~a---f~~~---------------------~~dF----~~a---IN~wv---T~g~-~~~l~~~~l~~~t~lvLvna--- 127 (357)
.+ |+++ .+|| +.+ ||+|| |+|+ ++++++ ++++++++|+||
T Consensus 80 ~an~i~~~~~~~l~~~f~~~~~~~~~~~~~~~dF~~~~~~a~~~IN~wv~~~T~g~I~~~~~~--i~~~t~lvlvnaiyF 157 (359)
T smart00093 80 TANALFVDKSLKLKDSFLEDIKKLYGAEVQSVDFSDKAEEAKKQINDWVEKKTQGKIKDLLSD--LDSDTRLVLVNAIYF 157 (359)
T ss_pred eeeeehccCCCchhHHHHHHHHHHhcCeeEEecCCCCHHHHHHHHHHHHHHhhhchHHHhccc--CCCCceEEEEeeEEE
Confidence 55 6554 5688 224 99999 9999 999975 999999999999
Q ss_pred ----cCCCCCCCceeeeeeec------------c-c---ccccCCCCeEEEe--ecCCeEEEEEEec-CCCChhHHhhcc
Q psy5102 128 ----DGQTKDELTHFMGVATG------------R-S---LSNNPEAYASFLE--KMRNEVYMYFILP-KNPDLSEFTKDL 184 (357)
Q Consensus 128 ----~~~F~~~~T~~~~F~~~------------~-~---~~~~~~~~~~vve--y~~~~~sm~iiLP-~~~~L~~l~~~L 184 (357)
+.||++..|.+++||.. . . |++.+++++++|+ |++ +++|+|||| + .+|.+++++|
T Consensus 158 kg~W~~~F~~~~T~~~~F~~~~g~~~~V~mM~~~~~~~~y~~~~~~~~~vv~Lpy~~-~~sm~iilP~~-~~l~~l~~~l 235 (359)
T smart00093 158 KGKWKTPFDPELTREEDFHVDETTTVKVPMMSQTGRTFNYGHDEELNCQVLELPYKG-NASMLIILPDE-GGLEKLEKAL 235 (359)
T ss_pred eeECCCCCCcccceecccEeCCCeEEEEeceeccCceeEEEEcCCCCcEEEEEecCC-CeeEEEEccCc-cHHHHHHHhh
Confidence 89999999999999975 1 3 3455788999999 887 699999999 6 6899999999
Q ss_pred ChhHHHHHHHhcCceeEEEEeceeeEeeccchHHHhhhCCccccCCCCCCCCCCCCCCCCceeeeeeEEEEEEEccCccc
Q psy5102 185 DYDKFSRIIESTNKVDVIYTIPKMKVTSSTELRTVLNTMNVTSMFDVSKSDLSNMLDDRGVAVDQVFHKVDIEVTEQGTV 264 (357)
Q Consensus 185 ~~~~l~~~~~~l~~~~v~l~lPkF~i~~~~dL~~~L~~lGl~~~F~~~~adfs~is~~~~l~vs~v~qk~~iev~E~G~~ 264 (357)
+...+..|.++++.+.|+|+||||++++++||+++|++||++++|+. .|||++|+++++++|++|+|++.|+|||+|++
T Consensus 236 ~~~~l~~~~~~~~~~~v~l~lPkf~i~~~~~l~~~L~~lGl~~~F~~-~adfs~i~~~~~l~vs~v~hka~ieVdE~Gt~ 314 (359)
T smart00093 236 TPETLKKWMKSLTKRSVELYLPKFKIEGTYDLKDVLEKLGITDLFSN-KADLSGISEDKDLKVSKVLHKAVLEVNEEGTE 314 (359)
T ss_pred CHHHHHHHHHhccceEEEEEccEEEEEEEecHHHHHHHcCcchhccC-ccCcccccCCCCeEEEeeeeEEEEEEcCCCcc
Confidence 99999999999999999999999999999999999999999999996 79999999876899999999999999999999
Q ss_pred cccccceeee-ecCCCEEEEcCceEEEEEECCCCcEEEEEEEcCC
Q psy5102 265 AAASTGIIIT-RISKPTVKINRPFIFFIYHKPTDSIVFWGSIYKP 308 (357)
Q Consensus 265 aaa~t~~~~~-~s~~~~f~~nrPFlf~I~d~~t~~iLF~G~v~~P 308 (357)
|+|+|.+... ++.+.+|++||||+|+|+|+.||.|||+|+|.+|
T Consensus 315 aaa~t~~~~~~~~~~~~f~~drPF~f~I~~~~t~~iLF~G~v~~P 359 (359)
T smart00093 315 AAAATGVIAVPRSLPPEFKANRPFLFLIRDNKTGSILFMGKVVNP 359 (359)
T ss_pred ccccccccccccCCCceEEecCCEEEEEEECCCCeEEEEEecCCC
Confidence 9999987655 4456789999999999999999999999999998
No 19
>cd02049 bacterial_SERPIN SERine Proteinase INhibitors (serpins), prokaryotic subgroup. Little information about specific functions is available for this subgroup, most likely they are inhibitory members of the serpin superfamily. In general, serpins exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors.
Probab=100.00 E-value=7.9e-56 Score=432.77 Aligned_cols=289 Identities=25% Similarity=0.361 Sum_probs=253.8
Q ss_pred HHHhhHHHHHHHHHHHhccCCCCCEEEchhhHHHHHHHHHcCCCchhHHHHHHhhCCCc-h--------hhHHhhc---c
Q psy5102 13 RRGITQMTLDMERAIRSVMTKNQNVVFAPLSIVGALALVLLGSDGQTKDELTHFMGVAT-G--------RSLSNKL---T 80 (357)
Q Consensus 13 ~~~~~~Fa~~l~~~l~~~~~~~~N~v~SP~si~~aL~~l~~Ga~g~T~~eL~~~Lg~~~-~--------~~ll~~l---~ 80 (357)
..++++||++||+.+... .+++|+|+||+||+.+|+|++.||+|+|++||.++||++. + +.+...+ +
T Consensus 2 ~~~~~~F~~~l~~~~~~~-~~~~N~v~SP~si~~~L~~l~~Ga~g~T~~ql~~~L~~~~~~~~~~~~~~~~l~~~l~~~~ 80 (364)
T cd02049 2 NDANTRFGFKLFSELNKE-DVEKNIFISPLSIALALSMTYNGADGTTRKEMLKALGLDNIDLEDLNSALATLMDQLNTHD 80 (364)
T ss_pred cchhhHHHHHHHHHHhhc-CCCCCEEECHHHHHHHHHHHhhhcCchHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHhcCC
Confidence 457899999999999876 6789999999999999999999999999999999999975 1 3344444 1
Q ss_pred -cceeeee---eccc---------------------cCCH--HHH---HHHHH---hCCC-cccCCCCCCCccceeEeec
Q psy5102 81 -AHSLRRG---ITQM---------------------TLDM--ERA---IRSVM---TKNQ-NVVFAPLSIVGALALVLLG 126 (357)
Q Consensus 81 -~~~l~~a---f~~~---------------------~~dF--~~a---IN~wv---T~g~-~~~l~~~~l~~~t~lvLvn 126 (357)
+..++++ |+++ .+|| +.+ ||+|| |+|+ ++++++ ++++|+++|+|
T Consensus 81 ~~~~l~~an~i~~~~~~~~~~~f~~~~~~~~~~~v~~~dF~~~~a~~~IN~wv~~~T~g~I~~~~~~--i~~~t~lvlvn 158 (364)
T cd02049 81 KTVELIIANSIWIEPGFTLKPDFLQTIKDYYQAYVLELDFQSPAAAEEINRWVKEKTKGKIDKIVDK--IDPDDVMFLIN 158 (364)
T ss_pred CCcEEEeehhhHhhCCCCccHHHHHHHHHhhcccceeeCCCCHHHHHHHHHHHHHhhcChHHHhcCC--CCCCceEEEEe
Confidence 3556665 5554 5788 223 99999 9999 999976 99999999999
Q ss_pred c-------cCCCCCCCceeeeeeec------------c-cccccCCCCeEEEe--ecCCeEEEEEEec-CCCChhHHhhc
Q psy5102 127 S-------DGQTKDELTHFMGVATG------------R-SLSNNPEAYASFLE--KMRNEVYMYFILP-KNPDLSEFTKD 183 (357)
Q Consensus 127 a-------~~~F~~~~T~~~~F~~~------------~-~~~~~~~~~~~vve--y~~~~~sm~iiLP-~~~~L~~l~~~ 183 (357)
| +.||++..|.+++|+.. . .+.|.+..++++++ |.+++++|+|||| +..+|.+++++
T Consensus 159 a~~fk~~W~~~F~~~~T~~~~F~~~~~~~~~v~mM~~~~~~~y~~~~~~~~l~Lpy~~~~~sm~iiLP~~~~~l~~l~~~ 238 (364)
T cd02049 159 AVYFKGDWQEPFDKQSTYEAPFYLPDGSTKEVPFMSRTGNFRYLETPGFQAVRLPYGDGRLSMYVFLPKENVSLREFVKT 238 (364)
T ss_pred eEEEeeeecCCCChhhcccCcCCCCCCCEEECcccCCcCcEeeEEcCCCeEEEeecCCCcEEEEEEecCCCCCHHHHHHH
Confidence 9 89999999999999976 2 44555667889999 9888999999999 88999999999
Q ss_pred cChhHHHHHHHhcCceeEEEEeceeeEeeccchHHHhhhCCccccCCCCCCCCCCCCCCCCceeeeeeEEEEEEEccCcc
Q psy5102 184 LDYDKFSRIIESTNKVDVIYTIPKMKVTSSTELRTVLNTMNVTSMFDVSKSDLSNMLDDRGVAVDQVFHKVDIEVTEQGT 263 (357)
Q Consensus 184 L~~~~l~~~~~~l~~~~v~l~lPkF~i~~~~dL~~~L~~lGl~~~F~~~~adfs~is~~~~l~vs~v~qk~~iev~E~G~ 263 (357)
|+.+.+..|.++++.+.|+|+||||++++++||.++|++||++.+|++..|||+++++. +++|++++|++.|+|||+|+
T Consensus 239 l~~~~~~~~~~~~~~~~v~v~lPkF~i~~~~~L~~~L~~mGi~~~F~~~~a~~s~~~~~-~l~vs~v~hka~iev~E~G~ 317 (364)
T cd02049 239 LTAEKWRKWIEQFRMREGSLSLPRFQLEYEIELRDALKALGMEEAFTPDAADFSKLGEG-NLYISKVIHKTFIEVNEEGT 317 (364)
T ss_pred hCHHHHHHHHHhCceeEEEEEeeeEEccceechHHHHHHCcccccCCCCcCCCCCCCCC-CeEEEeeeeeEEEEEccCce
Confidence 99999999999999999999999999999999999999999999999767999999765 89999999999999999999
Q ss_pred ccccccceeee-ec----CCCEEEEcCceEEEEEECCCCcEEEEEEE
Q psy5102 264 VAAASTGIIIT-RI----SKPTVKINRPFIFFIYHKPTDSIVFWGSI 305 (357)
Q Consensus 264 ~aaa~t~~~~~-~s----~~~~f~~nrPFlf~I~d~~t~~iLF~G~v 305 (357)
+|+++|.+... ++ .+.+|++||||+|+|+|+.|+.|||+|+|
T Consensus 318 ~a~a~t~~~~~~~~~~~~~~~~f~~nrPF~f~I~d~~t~~iLF~G~v 364 (364)
T cd02049 318 EAAAATSVEITETSAPAGEPFTMVADRPFLFAIRDNRTGSILFMGAV 364 (364)
T ss_pred eecccceeeeeeccCCCCCCceEEeeCCEEEEEEECCCCcEEEEEeC
Confidence 99999987554 32 34689999999999999999999999996
No 20
>cd02055 PZI Protein Z-dependent protease inhibitor (ZPI) is a member of the serpin superfamily of proteinase inhibitors (clade A10). ZPI inhibits coagulation factor Xa , dependent on protein Z (PZ), a vitamin K-dependent plasma protein. ZPI also inhibits factor XIa in a process that does not require PZ. In general, SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms.
Probab=100.00 E-value=4.2e-56 Score=434.56 Aligned_cols=288 Identities=23% Similarity=0.386 Sum_probs=248.5
Q ss_pred HHHHhhHHHHHHHHHHHhccCCCCCEEEchhhHHHHHHHHHcCCCchhHHHHHHhhCCCc---h---------hhHHhhc
Q psy5102 12 LRRGITQMTLDMERAIRSVMTKNQNVVFAPLSIVGALALVLLGSDGQTKDELTHFMGVAT---G---------RSLSNKL 79 (357)
Q Consensus 12 ~~~~~~~Fa~~l~~~l~~~~~~~~N~v~SP~si~~aL~~l~~Ga~g~T~~eL~~~Lg~~~---~---------~~ll~~l 79 (357)
|+++.++||++||+++... +++|+|+||+||+.+|+|++.||+|+|++||.++||++. . +.+.+.+
T Consensus 2 ~~~~~~~Fa~~l~~~~~~~--~~~Nvv~SP~si~~aL~ml~~GA~g~T~~ql~~~L~~~~~~~~~~~~~~~~~~~l~~~~ 79 (365)
T cd02055 2 FAEETANFGFNLLRKIAMK--HDGNIIFSPFGMSLAMAGLLLAAEGETERQIAKALHLHALKDRDPGLLPALFKGLKDNI 79 (365)
T ss_pred cchhhhHHHHHHHHHHhcC--CCCcEEEChHHHHHHHHHHHhhcCchHHHHHHHHcCCCCCccccHHHHHHHHHHHHHHh
Confidence 6778999999999999764 578999999999999999999999999999999999864 0 1222222
Q ss_pred c-c--ceeeee---eccc---------------------cCCH---HHH---HHHHH---hCCC-cccCCCCCCCcccee
Q psy5102 80 T-A--HSLRRG---ITQM---------------------TLDM---ERA---IRSVM---TKNQ-NVVFAPLSIVGALAL 122 (357)
Q Consensus 80 ~-~--~~l~~a---f~~~---------------------~~dF---~~a---IN~wv---T~g~-~~~l~~~~l~~~t~l 122 (357)
. + ..+..+ |+++ .+|| +++ ||+|| |+|+ ++++++ ++++|++
T Consensus 80 ~~~~~~~l~~~~~~~v~~~~~l~~~F~~~~~~~y~~~~~~vdF~~~~~a~~~IN~wv~~~T~g~I~~~~~~--i~~~t~l 157 (365)
T cd02055 80 SRNEELGFTQGIFAFIHKDFDVKEAFFNLSKQYFDMECLCMDFQNASQAKFLINHNIKKETKGKIPELFDE--IDPESKL 157 (365)
T ss_pred cCCcceehHHHHHHHHHCCCCccHHHHHHHHHHhcCeeEEECCCChHHHHHHHHHHHHHhhcchHHHHhhc--CCccchh
Confidence 1 1 111111 3332 6788 334 99999 9999 999965 8999999
Q ss_pred Eeecc-------cCCCCCCCceeeeeeec--------------c-cccccCCCCeEEEe--ecCCeEEEEEEec-CCCCh
Q psy5102 123 VLLGS-------DGQTKDELTHFMGVATG--------------R-SLSNNPEAYASFLE--KMRNEVYMYFILP-KNPDL 177 (357)
Q Consensus 123 vLvna-------~~~F~~~~T~~~~F~~~--------------~-~~~~~~~~~~~vve--y~~~~~sm~iiLP-~~~~L 177 (357)
+|+|| +.||++..|..++||.. . +|.+++++++++|+ |++ +.+|+|||| +..+|
T Consensus 158 ~lvnai~Fkg~W~~~F~~~~T~~~~F~~~~~~~~~V~mM~~~~~~~~~~~~~~~~~vv~LPy~~-~~sm~iiLP~~~~~l 236 (365)
T cd02055 158 ILLDYIFFKGKWLTPFDPEFTEIDTFHIDKYKSIKVPMMFGADKFASTFDENFRCHVIKLPYKG-KATMLIVIMEKGEDH 236 (365)
T ss_pred hhhHHHHHHHHHhCCCChhhCccceEEcCCCcEEEehhhcccCceeeEEeCCCCeEEEEeeeCC-CcEEEEEEcCCCCCH
Confidence 99999 89999999999999986 1 55677889999999 886 489999999 88899
Q ss_pred hHHhhccChhHHHHHHHhcCceeEEEEeceeeEeeccchHHHhhhCCccccCCCCCCCCCCCC-CCCCceeeeeeEEEEE
Q psy5102 178 SEFTKDLDYDKFSRIIESTNKVDVIYTIPKMKVTSSTELRTVLNTMNVTSMFDVSKSDLSNML-DDRGVAVDQVFHKVDI 256 (357)
Q Consensus 178 ~~l~~~L~~~~l~~~~~~l~~~~v~l~lPkF~i~~~~dL~~~L~~lGl~~~F~~~~adfs~is-~~~~l~vs~v~qk~~i 256 (357)
.++++.|+.+.+..|.++++++.|+|+||||+++.++||+++|++||++++|+. .|||++|+ ++++++|++|+|++.|
T Consensus 237 ~~l~~~l~~~~l~~~~~~~~~~~v~l~lPKF~i~~~~~l~~~L~~lGi~~~F~~-~adls~i~~~~~~l~vs~v~hka~i 315 (365)
T cd02055 237 LALEDHLTMDLVESWLANMKSRNMDIFFPKFKLDQKYEMHELLRALGIKNIFAP-FADLSELLADGKHLQVSQVLQKAVI 315 (365)
T ss_pred HHHHHHhhHHHHHHHHHhccceEEEEEEEEEEEEEEeehHHHHHHcCcchhhcC-cCCcccccCCCCcEEEEeeeEEEEE
Confidence 999999999999999999999999999999999999999999999999999997 79999986 4458999999999999
Q ss_pred EEccCccccccccceeee-ecCCCEEEEcCceEEEEEECCCCcEEEEEEE
Q psy5102 257 EVTEQGTVAAASTGIIIT-RISKPTVKINRPFIFFIYHKPTDSIVFWGSI 305 (357)
Q Consensus 257 ev~E~G~~aaa~t~~~~~-~s~~~~f~~nrPFlf~I~d~~t~~iLF~G~v 305 (357)
||||+|++|+|+|.+... ++.+..|++||||+|+|+|+.++.|||+|+|
T Consensus 316 evdE~Gt~aaa~t~~~~~~~~~~~~f~~nrPF~f~I~~~~~~~~LF~G~v 365 (365)
T cd02055 316 EVDEKGTEAAAAIGSEIIAFSMPPVIKVDRPFHFMIFEETFGMLLFIGRV 365 (365)
T ss_pred EEccCCchhhhhhcceecccCCCCeEEeeCCEEEEEEECCCCcEEEEEeC
Confidence 999999999999986554 4456689999999999999999999999986
No 21
>cd02053 alpha2AP Alpha2-antiplasmin (alpha2AP) is the primary inhibitor of plasmin, a proteinase that digests fibrin, the main component of blood clots. Alpha2-Antiplasmin forms an inactive 1 : 1 stoichiometric complex with plasmin. It also rapidly crosslinks to fibrin during blood clotting by activated coagulation factor XIII, and as a consequence fibrin becomes more resistant to fibrinolysis. Therefore alpha2AP is important in modulating the effectiveness and persistence of fibrin with respect to its susceptibility to digestion and removal by plasmin. This subgroup corresponds to clade F2 of the serpin superfamily.
Probab=100.00 E-value=5.8e-55 Score=424.65 Aligned_cols=283 Identities=23% Similarity=0.374 Sum_probs=240.8
Q ss_pred HHHhhHHHHHHHHHHHhccCCCCCEEEchhhHHHHHHHHHcCCCchhHHHHHHhhCCCch---hhHHhhc---c-cceee
Q psy5102 13 RRGITQMTLDMERAIRSVMTKNQNVVFAPLSIVGALALVLLGSDGQTKDELTHFMGVATG---RSLSNKL---T-AHSLR 85 (357)
Q Consensus 13 ~~~~~~Fa~~l~~~l~~~~~~~~N~v~SP~si~~aL~~l~~Ga~g~T~~eL~~~Lg~~~~---~~ll~~l---~-~~~l~ 85 (357)
..++++||++||+++... ++++|+|+||+||+.+|+|++.||+|+|++||.++||++.. +++++.+ . +..++
T Consensus 2 ~~~~~~F~~~l~~~~~~~-~~~~N~v~SP~si~~aL~~l~~Ga~g~T~~el~~~L~~~~~~~~~~~~~~l~~~~~~~~l~ 80 (351)
T cd02053 2 ARAMMGFSTDLLSEVAQE-STKPNLILSPLSIALALSHLALGAQNETEQRLLKTLHAESLPCLHHLLSRLRQDLGPGALR 80 (351)
T ss_pred CcchhhHHHHHHHHHHhh-CCCCcEEECcHHHHHHHHHHHhhcChHHHHHHHHhcCCCChHHHHHHHHHHhccCCccEee
Confidence 356789999999999877 78899999999999999999999999999999999999763 4444444 1 34455
Q ss_pred ee---eccc-------------------cCCH----HHH---HHHHH---hCCC-cccCCCCCCCccceeEeecc-----
Q psy5102 86 RG---ITQM-------------------TLDM----ERA---IRSVM---TKNQ-NVVFAPLSIVGALALVLLGS----- 127 (357)
Q Consensus 86 ~a---f~~~-------------------~~dF----~~a---IN~wv---T~g~-~~~l~~~~l~~~t~lvLvna----- 127 (357)
++ |+++ .++| +.+ ||+|| |+|+ +++++. ++++|.++|+||
T Consensus 81 ~an~i~v~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~IN~wv~~~T~g~I~~~~~~--~~~~t~~vlvNaiyFkg 158 (351)
T cd02053 81 LATRMYLQKGFEIKESFLEESEKLYGAKPVSLTGTKEDDLANINKWVKEATEGQIPNFLSD--LPHDTVLLLLNAIHFKG 158 (351)
T ss_pred hhhHHHHhCCCchhHHHHHHHHHHcCCEEeecCCCCHHHHHHHHHHHHHhccCchhHhcCC--CCcchHhheeeEEEEee
Confidence 54 5544 3444 233 99999 9999 999864 889999999999
Q ss_pred --cCCCCCCCceeeeeeec-------------c---cccccCCCCeEEEe--ecCCeEEEEEEec-CCC-ChhHHhhccC
Q psy5102 128 --DGQTKDELTHFMGVATG-------------R---SLSNNPEAYASFLE--KMRNEVYMYFILP-KNP-DLSEFTKDLD 185 (357)
Q Consensus 128 --~~~F~~~~T~~~~F~~~-------------~---~~~~~~~~~~~vve--y~~~~~sm~iiLP-~~~-~L~~l~~~L~ 185 (357)
++||++..|.+++||.. . +|.++++++++|++ |+++ +||+|||| +.. +|.++++.|+
T Consensus 159 ~W~~~F~~~~T~~~~F~~~~~~~~~V~mM~~~~~~~~~~~~~~~~~~vleLPy~~~-~Sm~iiLP~~~~~~l~~~~~~l~ 237 (351)
T cd02053 159 FWRNKFDPSLTQRDAFHLDDDFTVSVEMMQASTYPLRWFHLEQPEIQVAKFPFKGN-MSFVVLMPTPFTWNVSQVLANLN 237 (351)
T ss_pred eecCCCChhcCeecceEECCCceEEeehhcccccceeeEecCCCCeEEEEEecCCC-eEEEEEecccccccHHHHHHhCC
Confidence 89999999999999986 1 33456789999999 8875 99999999 655 5999999998
Q ss_pred hhHHHHHHHhcCceeEEEEeceeeEeeccchHHHhhhCCccccCCCCCCCCCCCCCCCCceeeeeeEEEEEEEccCcccc
Q psy5102 186 YDKFSRIIESTNKVDVIYTIPKMKVTSSTELRTVLNTMNVTSMFDVSKSDLSNMLDDRGVAVDQVFHKVDIEVTEQGTVA 265 (357)
Q Consensus 186 ~~~l~~~~~~l~~~~v~l~lPkF~i~~~~dL~~~L~~lGl~~~F~~~~adfs~is~~~~l~vs~v~qk~~iev~E~G~~a 265 (357)
.+.+..+. .+.+.++|+||||++++++||+++|++||++++|+. |||++|+++ +++|++|+|++.|||||+|++|
T Consensus 238 ~~~l~~~~--~~~~~v~v~lPKFki~~~~~L~~~L~~lGi~~~F~~--adfs~i~~~-~~~vs~v~hka~ieVdE~Gt~a 312 (351)
T cd02053 238 WDDLYRRL--PKERPTKVKLPKLKLDYQLELNEALSQLGLQELFQA--PDLSGISDE-PLFVSSVQHQSTLELSEKGVEA 312 (351)
T ss_pred HHHHHHhh--ccceEEEEEccCEEEEeeechHHHHHhCCchhcccc--ccccccCCC-CceeeeeeEEEEEEECCCccee
Confidence 87776653 356678999999999999999999999999999984 999999875 7999999999999999999999
Q ss_pred ccccceeeeecCCCEEEEcCceEEEEEECCCCcEEEEEEE
Q psy5102 266 AASTGIIITRISKPTVKINRPFIFFIYHKPTDSIVFWGSI 305 (357)
Q Consensus 266 aa~t~~~~~~s~~~~f~~nrPFlf~I~d~~t~~iLF~G~v 305 (357)
+|+|.+.+.++ ...|++||||+|+|+|+.||.|||+|+|
T Consensus 313 aa~t~~~~~~~-~~~f~~drPF~f~I~~~~t~~~LF~G~v 351 (351)
T cd02053 313 SAATSVATSRS-LSSFSVNRPFLFFIFEDTMGLPLFMGSV 351 (351)
T ss_pred hhcceeecccc-cCeEEcCCCEEEEEEECCCCCEEEEEeC
Confidence 99997654332 3489999999999999999999999996
No 22
>cd02050 C1_inh C1 inhibitor (C1-Inh) is a protease inhibitor of the serpin family. It plays a pivotal role in regulating the activation of the classical complement pathway and of the contact system, via regulating bradykinin formation, inhibiting factor XII and kallikrein of the contact system, and via acting on factor XI in the coagulation cascade. This subgroup corresponds to clade G of the serpin superfamily.
Probab=100.00 E-value=5.8e-55 Score=424.83 Aligned_cols=284 Identities=21% Similarity=0.360 Sum_probs=240.3
Q ss_pred HhhHHHHHHHHHHHhccC-CCCCEEEchhhHHHHHHHHHcCCCchhHHHHHHhhCCCch----hhHHhhc----------
Q psy5102 15 GITQMTLDMERAIRSVMT-KNQNVVFAPLSIVGALALVLLGSDGQTKDELTHFMGVATG----RSLSNKL---------- 79 (357)
Q Consensus 15 ~~~~Fa~~l~~~l~~~~~-~~~N~v~SP~si~~aL~~l~~Ga~g~T~~eL~~~Lg~~~~----~~ll~~l---------- 79 (357)
++++||++||+++... . +++|+|+||+||+.+|+|++.||+|+|++||.++||++.+ ...++.+
T Consensus 1 ~~~~F~~~l~~~~~~~-~~~~~N~v~SP~si~~aL~ml~~GA~g~T~~ql~~~L~~~~~~~~~~~~~~~l~~~~~l~~an 79 (352)
T cd02050 1 ALGEFSLKLYQHLSES-AKPDTNLLFSPVSIALLLSHLLLGARGKTQRRLESILSYPHDFACVHSALKKLKNKLGLLSAS 79 (352)
T ss_pred CcchHHHHHHHHHhhc-cCCCCCEEEChHHHHHHHHHHhcccCccHHHHHHHhcCCCCchhHHHHHHHHhhhcchhHHHH
Confidence 4679999999999876 4 7899999999999999999999999999999999999862 1222222
Q ss_pred ----c-cceeeeeeccc----------cCCH--HHH---HHHHH---hCCC-cccCCCCCCCccceeEeecc-------c
Q psy5102 80 ----T-AHSLRRGITQM----------TLDM--ERA---IRSVM---TKNQ-NVVFAPLSIVGALALVLLGS-------D 128 (357)
Q Consensus 80 ----~-~~~l~~af~~~----------~~dF--~~a---IN~wv---T~g~-~~~l~~~~l~~~t~lvLvna-------~ 128 (357)
+ ++.++..|.+. .++| +.+ ||+|| |+|+ +++++. ++++|+++++|| +
T Consensus 80 ~i~~~~~~~l~~~f~~~~~~~y~~~~~~~~~~~~~a~~~IN~wv~~~T~g~I~~~~~~--i~~~t~l~lvnaiyFkg~W~ 157 (352)
T cd02050 80 QIFHHPDLHLRESFTNESWQFYKARPRELSNNSELNLEMINSWVAKATNNKIPRLLDS--LPSETRLVLLNAVYFQAQWK 157 (352)
T ss_pred HHHHhCCCCccHHHHHHHHHHhCCcceeecCChHHHHHHHHHHHHHHhcchHHHHhcc--cCCCceEEEEeeEEEeeecC
Confidence 1 22222223222 4556 333 99999 9999 999964 999999999999 8
Q ss_pred CCCCCCCceeeeeeec----------c-----cccccCCCCeEEEe--ecCCeEEEEEEec-CC-CChhHHhhccChhHH
Q psy5102 129 GQTKDELTHFMGVATG----------R-----SLSNNPEAYASFLE--KMRNEVYMYFILP-KN-PDLSEFTKDLDYDKF 189 (357)
Q Consensus 129 ~~F~~~~T~~~~F~~~----------~-----~~~~~~~~~~~vve--y~~~~~sm~iiLP-~~-~~L~~l~~~L~~~~l 189 (357)
+||++..|..++|+.. . .|.+.+++++++++ |.+ ++||+|||| +. .+|.+++++|+.+.+
T Consensus 158 ~~F~~~~T~~~~F~~~~~~~~V~mM~~~~~~~~~~~~~~l~~~v~~lp~~~-~~sm~iiLP~~~~~~l~~l~~~l~~~~~ 236 (352)
T cd02050 158 KKFDTKHTVLLPFKRNGDPVKVPVMYSKKYPVASFTDPRLKAQVGRLELSG-GLSLVVLVPRGPKEDLEAVERALTPPAF 236 (352)
T ss_pred CCCCcccCccCceeECCceEEeeEeecCccceeeEEcCCcCeEEEEecCCC-ceEEEEEeeCCCCCCHHHHHHhcCHHHH
Confidence 9999999999999976 1 12345788999999 764 599999999 64 689999999999999
Q ss_pred HHHHHhc---CceeEEEEeceeeEeeccchHHHhhhCCccccCCCCCCCCCCCCCCCCceeeeeeEEEEEEEccCccccc
Q psy5102 190 SRIIEST---NKVDVIYTIPKMKVTSSTELRTVLNTMNVTSMFDVSKSDLSNMLDDRGVAVDQVFHKVDIEVTEQGTVAA 266 (357)
Q Consensus 190 ~~~~~~l---~~~~v~l~lPkF~i~~~~dL~~~L~~lGl~~~F~~~~adfs~is~~~~l~vs~v~qk~~iev~E~G~~aa 266 (357)
..|.+++ ..+.++|.||||++++++||+++|++||++++|+. |||++|+.+.+++|++++|++.|+|||+|++|+
T Consensus 237 ~~~~~~l~~~~~~~v~l~lPKF~i~~~~dl~~~L~~lGi~~~F~~--adfs~i~~~~~l~v~~v~hk~~ieVdE~Gt~Aa 314 (352)
T cd02050 237 LAMLEKMAANTPQRTEVTLPRIKLDLAVDMVALMHKLGLFGLFLD--ANLCGLYQDPELAVDAAQHRAVLTLTEKGVEAA 314 (352)
T ss_pred HHHHHhhhhcCceEEEEEcceEEEeeccchHHHHHHcCChhhccc--cchhhccCCCCeEEEeeEEeeEEEECCCchhhh
Confidence 9998877 35789999999999999999999999999999974 999999987789999999999999999999999
Q ss_pred cccceeeeecCCCEEEEcCceEEEEEECCCCcEEEEEEE
Q psy5102 267 ASTGIIITRISKPTVKINRPFIFFIYHKPTDSIVFWGSI 305 (357)
Q Consensus 267 a~t~~~~~~s~~~~f~~nrPFlf~I~d~~t~~iLF~G~v 305 (357)
|+|.+.+.++ +.+|++||||+|+|+|+.||.|||+|+|
T Consensus 315 a~t~~~~~~~-~~~f~~drPF~f~I~~~~t~~~LF~G~v 352 (352)
T cd02050 315 AATATSFART-ALSFEALQPFLFVLWDDQAKVPLFMGRV 352 (352)
T ss_pred hhcccccccc-cceEEcCCCEEEEEEECCCCceEEEEeC
Confidence 9997654332 3689999999999999999999999996
No 23
>cd02043 plant_SERPIN SERine Proteinase INhibitors (serpins), plant specific subgroup. It has been suggested that plant serpins play a role in defense against insect predators. This subgroup corresponds to clade P of the serpin superfamily. In general, serpins exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones.
Probab=100.00 E-value=1.7e-54 Score=425.71 Aligned_cols=293 Identities=26% Similarity=0.369 Sum_probs=245.2
Q ss_pred HhhHHHHHHHHHHHhccCCCCCEEEchhhHHHHHHHHHcCCCchhHHHHHHhhCCCch-------hhHHhhc------c-
Q psy5102 15 GITQMTLDMERAIRSVMTKNQNVVFAPLSIVGALALVLLGSDGQTKDELTHFMGVATG-------RSLSNKL------T- 80 (357)
Q Consensus 15 ~~~~Fa~~l~~~l~~~~~~~~N~v~SP~si~~aL~~l~~Ga~g~T~~eL~~~Lg~~~~-------~~ll~~l------~- 80 (357)
.+++||++||+.+....++++|+|+||+||+.+|+||++||+|+|++||.++||++.. +++.+.+ .
T Consensus 2 ~~~~~~~~l~~~~~~~~~~~~N~v~SP~si~~aL~ml~~GA~g~T~~ql~~~L~~~~~~~~~~~~~~l~~~~~~~~~~~~ 81 (381)
T cd02043 2 NQCLVAMRLSGHVAAAAGKGSNVIFSPLSINVALSLVAAGARGETLDQLLSFLGSPSTDELHAVAASIVDLVLADASASG 81 (381)
T ss_pred chHHHHHHHHHHHhccCCCCCcEEECHHHHHHHHHHHhcccCCcHHHHHHHHhCCCChHHHHHHHHHHHHHHhhhcccCC
Confidence 4678999999999876127899999999999999999999999999999999999762 2333322 1
Q ss_pred cceeeee---eccc---------------------cCCH----HHH---HHHHH---hCCC-cccCCCCCCCccceeEee
Q psy5102 81 AHSLRRG---ITQM---------------------TLDM----ERA---IRSVM---TKNQ-NVVFAPLSIVGALALVLL 125 (357)
Q Consensus 81 ~~~l~~a---f~~~---------------------~~dF----~~a---IN~wv---T~g~-~~~l~~~~l~~~t~lvLv 125 (357)
+..++++ |+++ .+|| +.+ ||+|| |+|+ ++++++++++++|+++++
T Consensus 82 ~~~l~~an~l~~~~~~~~~~~f~~~~~~~y~~~~~~vdF~~~~~~a~~~IN~wv~~~T~g~I~~~~~~~~i~~~t~l~lv 161 (381)
T cd02043 82 GPRLSFANGVWVDKSLSLKPSFKDLAANSYKAEARPVDFRTKAEEVRREVNSWVEKATNGLIKDILPPGSVDSSTKLVLA 161 (381)
T ss_pred CcEEehhhhHHHhCCCCcCHHHHHHHHhhhhccceeecCCCCHHHHHHHHHHHHHHHhcChHHhhCCCCCcCCCceEEEE
Confidence 2345554 5443 6788 233 99999 9999 999988889999999999
Q ss_pred cc-------cCCCCCCCceeeeeeec------------c-cccccCCCCeEEEe--ecCC------eEEEEEEec-CCCC
Q psy5102 126 GS-------DGQTKDELTHFMGVATG------------R-SLSNNPEAYASFLE--KMRN------EVYMYFILP-KNPD 176 (357)
Q Consensus 126 na-------~~~F~~~~T~~~~F~~~------------~-~~~~~~~~~~~vve--y~~~------~~sm~iiLP-~~~~ 176 (357)
|| ++||++..|.+++||.. . .+.|....++++|+ |+++ ++||+|||| +..+
T Consensus 162 nai~Fkg~W~~~F~~~~T~~~~F~~~~g~~~~V~mM~~~~~~~~~~~~~~~~veLPy~~~~~~~~~~~sm~iiLP~~~~~ 241 (381)
T cd02043 162 NALYFKGAWSSKFDASDTKDRDFHLLDGTSVRVPFMSSEKDQYVAAFDGFKVLRLPYKRGGHDDARQFSMYIYLPDKKDG 241 (381)
T ss_pred eeeEEeeeeccCCccccCccccceeCCCCeEEeeeeeccCcccccccCCCEEEEcCCCCCCCCCCCcEEEEEEccCCCCC
Confidence 99 89999999999999976 1 22333345699999 9765 599999999 8899
Q ss_pred hhHHhhccChh--HHHHHHHhcCceeEEEEeceeeEeeccchHHHhhhCCccccCCCCCCCCCCCCC--CCCceeeeeeE
Q psy5102 177 LSEFTKDLDYD--KFSRIIESTNKVDVIYTIPKMKVTSSTELRTVLNTMNVTSMFDVSKSDLSNMLD--DRGVAVDQVFH 252 (357)
Q Consensus 177 L~~l~~~L~~~--~l~~~~~~l~~~~v~l~lPkF~i~~~~dL~~~L~~lGl~~~F~~~~adfs~is~--~~~l~vs~v~q 252 (357)
|.+++++|+.. .+..|...++.+.++|+||||++++++||+++|++||++++|+. .++++++.. ..+++|++|+|
T Consensus 242 L~~l~~~l~~~~~~~~~~~~~~~~~~v~l~lPKF~i~~~~dl~~~L~~mGl~~~F~~-~~~~~~~~~~~~~~l~vs~v~h 320 (381)
T cd02043 242 LADLLEKLVSEPGFLDRHIPASEQEVGAFMIPKFKFSFGFEASEVLKKLGLTLPFDP-GGALLSMSSPEGENLYVSSVYH 320 (381)
T ss_pred HHHHHHhhccChhhhhhhcccceeeEEEEEcccEEEEeecchHHHHHHCCCccccCC-ccccccCccCCCCCeeEEeeee
Confidence 99999999653 36667777778889999999999999999999999999999997 567776642 34799999999
Q ss_pred EEEEEEccCccccccccceeee-ec----CCCEEEEcCceEEEEEECCCCcEEEEEEEcCC
Q psy5102 253 KVDIEVTEQGTVAAASTGIIIT-RI----SKPTVKINRPFIFFIYHKPTDSIVFWGSIYKP 308 (357)
Q Consensus 253 k~~iev~E~G~~aaa~t~~~~~-~s----~~~~f~~nrPFlf~I~d~~t~~iLF~G~v~~P 308 (357)
++.|+|||+|++|+|+|.+... ++ .+.+|++||||+|+|+|..|+.|||+|+|.+|
T Consensus 321 ka~ieVdE~Gt~aaa~t~~~~~~~~~~~~~~~~f~~drPF~f~I~~~~t~~iLF~G~v~~P 381 (381)
T cd02043 321 KACVEVDEEGTEAAAATAVVMSGTSSPPPRPVDFVADHPFLFLIREDKTGVVLFLGQVMNP 381 (381)
T ss_pred EEEEEECCCcceehhccceeeccccCCCCCCceEEecCCEEEEEEECCCCcEEEEEEecCC
Confidence 9999999999999999987554 33 24579999999999999999999999999998
No 24
>PHA02660 serpin-like protein; Provisional
Probab=100.00 E-value=3.1e-51 Score=399.56 Aligned_cols=287 Identities=19% Similarity=0.300 Sum_probs=232.5
Q ss_pred chhHHHHhhHHHHHHHHHHHhccCCCCCEEEchhhHHHHHHHHHcCCCchhHHHHHHhhCCCch----hh--HHhhc--c
Q psy5102 9 NLILRRGITQMTLDMERAIRSVMTKNQNVVFAPLSIVGALALVLLGSDGQTKDELTHFMGVATG----RS--LSNKL--T 80 (357)
Q Consensus 9 ~~~~~~~~~~Fa~~l~~~l~~~~~~~~N~v~SP~si~~aL~~l~~Ga~g~T~~eL~~~Lg~~~~----~~--ll~~l--~ 80 (357)
+..+.....+||++||+++. ++|+|+||+||+.+|+|++.||+|+|++||.++||+... .. ....+ +
T Consensus 8 ~~~~~~~~~~f~~~l~~~~~-----~~Nvv~SP~Si~~aL~ml~~GA~G~T~~el~~~L~~~~~~~~~~~l~~an~l~v~ 82 (364)
T PHA02660 8 NNNIIKMSLDLGFCILKSLH-----RFNIVFSPESLKAFLHVLYLGSERETKNELSKYIGHAYSPIRKNHIHNITKVYVD 82 (364)
T ss_pred cchHHHHHHHHHHHHHHhcC-----CCCEEEChHHHHHHHHHHHhhcCchHHHHHHHHhCccccccchhhHHHHHHHHHh
Confidence 34567788999999999984 479999999999999999999999999999999998631 11 11222 2
Q ss_pred -cceeeeeecc-------c--cCCH----HHH---HHHHH---hCCCcccCCCCCCCccceeEeecc-------cCCCCC
Q psy5102 81 -AHSLRRGITQ-------M--TLDM----ERA---IRSVM---TKNQNVVFAPLSIVGALALVLLGS-------DGQTKD 133 (357)
Q Consensus 81 -~~~l~~af~~-------~--~~dF----~~a---IN~wv---T~g~~~~l~~~~l~~~t~lvLvna-------~~~F~~ 133 (357)
+..++..|.+ + .+|| +++ ||+|| |+ -.++++ ++++|+++|+|| ++||++
T Consensus 83 ~~~~l~~~F~~~~~~~~~~v~~vdF~~~~~~a~~~IN~WV~~~T~-I~~~~~---~~~~t~l~LvNaiyFkg~W~~~F~~ 158 (364)
T PHA02660 83 SHLPIHSAFVASMNDMGIDVILADLANHAEPIRRSINEWVYEKTN-IINFLH---YMPDTSILIINAVQFNGLWKYPFLR 158 (364)
T ss_pred cCCchhHHHHHHHHHcCCceEEeccccCHHHHHHHHHHHHHhccC-Cccccc---cCCCchhhhhhhhhcccHhhcCCCc
Confidence 3444333322 2 6899 233 99999 66 445552 778999999999 899999
Q ss_pred CCceeeeeeec------------c-cccccCCCCeEEEe--ecCC-eEEEEEEec-CC--CChhHHhhccChhHHHHHHH
Q psy5102 134 ELTHFMGVATG------------R-SLSNNPEAYASFLE--KMRN-EVYMYFILP-KN--PDLSEFTKDLDYDKFSRIIE 194 (357)
Q Consensus 134 ~~T~~~~F~~~------------~-~~~~~~~~~~~vve--y~~~-~~sm~iiLP-~~--~~L~~l~~~L~~~~l~~~~~ 194 (357)
..|.+++||.. . .|.|....++++++ |+++ .++|+|||| +. .+|.++++.|+.+.+..|.+
T Consensus 159 ~~T~~~~F~~~~~~~~~V~mM~~~~~~~~~~~~~~~vleLPY~~~~~~sM~iiLP~~~~~~~L~~l~~~l~~~~l~~~~~ 238 (364)
T PHA02660 159 KKTTMDIFNIDKVSFKYVNMMTTKGIFNAGRYHQSNIIEIPYDNCSRSHMWIVFPDAISNDQLNQLENMMHGDTLKAFKH 238 (364)
T ss_pred ccCcccccccCCCceEeceeccccCeeeeeecCCCeEEECccCCCCceEEEEEeeCCcccchHHHHHHhhhHHHHHHHHh
Confidence 99999999976 1 23333345689999 9874 579999999 53 57999999999999999988
Q ss_pred hcCceeEEEEeceeeEeeccchHHHhhhCCccccCCCCCCCCCCCCCCC----Cce--eeeeeEEEEEEEccCccccccc
Q psy5102 195 STNKVDVIYTIPKMKVTSSTELRTVLNTMNVTSMFDVSKSDLSNMLDDR----GVA--VDQVFHKVDIEVTEQGTVAAAS 268 (357)
Q Consensus 195 ~l~~~~v~l~lPkF~i~~~~dL~~~L~~lGl~~~F~~~~adfs~is~~~----~l~--vs~v~qk~~iev~E~G~~aaa~ 268 (357)
.+..+.|+|+||||+++.++||+++|++||++++|+. |||++|+++. +++ |++|+||+.|||||+|++|+|+
T Consensus 239 ~~~~~~v~l~LPKFki~~~~~L~~~L~~lGi~~~F~~--Adfs~i~~~~~~~~~l~~~vs~v~hka~ieVdE~GteAaaa 316 (364)
T PHA02660 239 ASRKKYLEISIPKFRIEHSFNAEHLLPSAGIKTLFTN--PNLSRMITQGDKEDDLYPLPPSLYQKIILEIDEEGTNTKNI 316 (364)
T ss_pred hCceeEEEEEccceEeeeeechHHHHHHcCchhhccc--cCccccccCCCcccccccccccceEeeEEEECCCCcHHHHh
Confidence 8889999999999999999999999999999999974 9999997532 477 7999999999999999999988
Q ss_pred cceeeeec----------CCCEEEEcCceEEEEEECCCCcEEEEEEEcCC
Q psy5102 269 TGIIITRI----------SKPTVKINRPFIFFIYHKPTDSIVFWGSIYKP 308 (357)
Q Consensus 269 t~~~~~~s----------~~~~f~~nrPFlf~I~d~~t~~iLF~G~v~~P 308 (357)
|....... .+.+|++||||+|+|++ ++.|||+|+|.+|
T Consensus 317 t~~~~~~~~~~~~~~~~~~~~~f~~drPFlf~I~~--~~~iLF~G~v~~P 364 (364)
T PHA02660 317 AKKMRRNPQDEDTQQHLFRIESIYVNRPFIFIIEY--ENEILFIGRISIP 364 (364)
T ss_pred hhhhhhcccccccccccCCCceEEcCCCEEEEEec--CCeEEEEEEecCC
Confidence 74311111 12479999999999986 5899999999998
No 25
>PF07037 DUF1323: Putative transcription regulator (DUF1323); InterPro: IPR010749 This family consists of several hypothetical Enterobacterial proteins of around 120 residues in length. The function of this family is unknown.
Probab=25.80 E-value=1e+02 Score=25.37 Aligned_cols=28 Identities=11% Similarity=0.057 Sum_probs=15.6
Q ss_pred HHHHH-hCC-CcccCCCCCCCccceeEeecc
Q psy5102 99 IRSVM-TKN-QNVVFAPLSIVGALALVLLGS 127 (357)
Q Consensus 99 IN~wv-T~g-~~~~l~~~~l~~~t~lvLvna 127 (357)
||+|| ..| +..-++. .---..++|.||.
T Consensus 17 INrWvRkegW~T~p~pG-VkGGrARLIhId~ 46 (122)
T PF07037_consen 17 INRWVRKEGWKTEPKPG-VKGGRARLIHIDE 46 (122)
T ss_pred HHHHHHhcCceeccCCc-cccccceeeeecH
Confidence 99999 333 2332322 2223477888866
No 26
>PF12415 rpo132: Poxvirus DNA dependent RNA polymerase; InterPro: IPR024390 All three classes of poxvirus genes - early, intermediate and late - are transcribed by the viral RNA polymerase compex []. This complex is composed of nine distinct subunits which total more than 500kDa in mass. The two largest subunits (147 and 136kDa) are homologous to the largest subunits of eukaryotic and prokaryotic RNA polymerases and, like them, are thought to form a claw-shaped structure whose cleft is the site of template interaction and phosphodiester bond formation. While the smaller subunits of poxvirus RNA polymerase show much less similarity, if any, to the smaller subunits of the eukaryotic and prokaryotic enzymes, it is thought that they may play a similar role in interacting with transcription factors. The 132kDa subunit is the second largest subunit of the poxvirus DNA dependent RNA polymerase and shows structural similarity to the second-largest RNA polymerase subunits of eubacteria, archaebacteria, and eukaryotes.
Probab=24.36 E-value=21 Score=22.31 Aligned_cols=22 Identities=23% Similarity=0.472 Sum_probs=17.7
Q ss_pred eecCCCccchhhhhhhhhcccc
Q psy5102 334 LDFGNPASARFVNNYILSATKS 355 (357)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~ 355 (357)
||||.|..+-+.-|-+.-.||-
T Consensus 7 Lsydmp~ei~ylvnalIestk~ 28 (33)
T PF12415_consen 7 LSYDMPPEIIYLVNALIESTKR 28 (33)
T ss_pred hccCCCHHHHHHHHHHHHHHHH
Confidence 7999999988877777766664
Done!