Query psy5105
Match_columns 100
No_of_seqs 112 out of 364
Neff 5.0
Searched_HMMs 29240
Date Fri Aug 16 17:24:47 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5105.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/5105hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2h00_A Methyltransferase 10 do 98.8 2.5E-09 8.5E-14 77.5 3.8 58 38-95 2-59 (254)
2 3evz_A Methyltransferase; NYSG 96.7 0.00041 1.4E-08 48.7 1.3 42 41-82 5-46 (230)
3 1wey_A Calcipressin 1; structu 85.8 0.41 1.4E-05 32.2 2.2 65 17-81 25-98 (104)
4 3mi6_A Alpha-galactosidase; NE 68.6 17 0.00058 31.4 7.5 48 21-71 423-480 (745)
5 2yfo_A Alpha-galactosidase-suc 62.0 39 0.0013 28.6 8.5 26 41-66 446-473 (720)
6 2pi6_A Chitinase-3-like protei 51.8 12 0.0004 28.5 3.3 74 19-94 59-139 (361)
7 3sim_A Protein, family 18 chit 43.1 44 0.0015 24.4 5.2 75 18-94 65-147 (275)
8 1mdy_A Protein (MYOD BHLH doma 42.3 12 0.00041 22.8 1.7 12 82-93 56-67 (68)
9 2ql2_B Neurod1, neurogenic dif 40.3 16 0.00056 21.6 2.0 13 82-94 47-59 (60)
10 1nar_A Narbonin; plant SEED pr 39.0 27 0.00093 25.8 3.5 68 18-94 67-150 (290)
11 1wb0_A Chitinase 1, chitotrios 38.9 24 0.00083 27.7 3.3 76 19-95 59-145 (445)
12 3g6m_A Chitinase, crchi1; inhi 34.7 46 0.0016 25.6 4.3 74 18-94 94-175 (406)
13 1c07_A Protein (epidermal grow 32.9 39 0.0013 20.3 3.0 39 38-77 56-94 (95)
14 4aya_A DNA-binding protein inh 32.2 30 0.001 22.8 2.4 38 49-96 35-84 (97)
15 3fy1_A Amcase, TSA1902, acidic 27.9 40 0.0014 26.0 2.9 75 19-94 59-144 (395)
16 1vf8_A YM1, secretory protein; 27.6 42 0.0014 25.6 2.9 76 19-95 59-145 (377)
17 4ay1_A Chitinase-3-like protei 25.9 50 0.0017 24.8 3.0 69 19-93 60-139 (365)
18 1kfw_A Chitinase B; TIM barrel 25.2 1E+02 0.0036 24.1 4.9 75 19-94 108-215 (435)
19 1vm6_A DHPR, dihydrodipicolina 24.8 42 0.0014 24.9 2.4 26 40-67 55-80 (228)
20 1uw4_A UPF3X; nonsense mediate 24.6 48 0.0016 21.1 2.4 21 38-58 45-65 (91)
21 3qok_A Putative chitinase II; 24.1 1.6E+02 0.0054 22.5 5.7 75 19-95 98-187 (420)
22 2gsj_A Protein PPL-2; mimosoid 23.2 1.2E+02 0.0039 22.4 4.6 67 20-93 62-142 (271)
23 2l08_A Regulator of nonsense t 21.5 69 0.0023 20.8 2.7 20 38-57 53-72 (97)
24 1eok_A Endo-beta-N-acetylgluco 21.4 87 0.003 22.9 3.6 55 42-96 89-174 (290)
25 3oa5_A CHI1; TIM barrel, hydro 21.1 1.2E+02 0.004 25.3 4.6 76 17-93 226-316 (574)
26 1edq_A Chitinase A; beta-alpha 21.0 1.7E+02 0.0059 23.6 5.5 75 19-94 233-322 (540)
27 3e70_C DPA, signal recognition 20.7 34 0.0012 26.0 1.2 29 38-66 42-71 (328)
28 2eo2_A Adult MALE hypothalamus 20.3 13 0.00045 23.4 -1.0 28 72-99 17-44 (71)
29 3r6u_A Choline-binding protein 20.2 59 0.002 24.1 2.4 28 42-69 18-45 (284)
No 1
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=98.81 E-value=2.5e-09 Score=77.46 Aligned_cols=58 Identities=55% Similarity=1.102 Sum_probs=52.4
Q ss_pred CCcEEeeCCCHHHHHHHHHHHHhhhhCceEecCCCCcCCCCcchHHHHHHHHHHHhhc
Q psy5105 38 SGKLKFNFQNPDALRIFTTTVLRKDFGLNVEIPPMRLVPTLPLRLNYILWIEDLLEAN 95 (100)
Q Consensus 38 ~G~~~iDF~~~~Av~~LtkaLL~~dfgL~~~lP~~~LcP~iP~R~nYI~wi~DLL~~~ 95 (100)
+|+.+|||++++|+++|++++++..+|+++.++.+.++|++++|..|..|+++++...
T Consensus 2 ~~~~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~~~~~~~~~~~~ 59 (254)
T 2h00_A 2 SGRVSLNFKDPEAVRALTCTLLREDFGLSIDIPLERLIPTVPLRLNYIHWVEDLIGHQ 59 (254)
T ss_dssp ---CCSCTTSHHHHHHHHHHHHHHHHCCCCCCCTTSCCCCHHHHHHHHHHHHHHHCCC
T ss_pred CcceEeecCChHHHHHHHHHHHHHcCCeeeecCccccCCCccchHHHHHHHHHHHhhc
Confidence 4778999999999999999999999999999999999999999999999999998643
No 2
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=96.75 E-value=0.00041 Score=48.73 Aligned_cols=42 Identities=31% Similarity=0.467 Sum_probs=34.6
Q ss_pred EEeeCCCHHHHHHHHHHHHhhhhCceEecCCCCcCCCCcchH
Q psy5105 41 LKFNFQNPDALRIFTTTVLRKDFGLNVEIPPMRLVPTLPLRL 82 (100)
Q Consensus 41 ~~iDF~~~~Av~~LtkaLL~~dfgL~~~lP~~~LcP~iP~R~ 82 (100)
.++||++++|+++++++++++.||.++.+..+.++|+...+.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 46 (230)
T 3evz_A 5 GKLDFSNRQARILYNKAIAKALFGLDIEYHPKGLVTTPISRY 46 (230)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHCCCCCCCTTSCCCCHHHHH
T ss_pred ceeeecCHHHHHHHHHHHHHHhcCCceecCCCeEeCCCchhh
Confidence 358999999999999999999999999999999998765543
No 3
>1wey_A Calcipressin 1; structural genomics, RRM domain, riken structural genomics/proteomics initiative, RSGI, RNA binding protein; NMR {Mus musculus} SCOP: d.58.7.1
Probab=85.83 E-value=0.41 Score=32.19 Aligned_cols=65 Identities=18% Similarity=0.224 Sum_probs=49.3
Q ss_pred ccHHHHHHhCCchhhchhhcCCCcEEeeCCCHHHHHHHHHH---------HHhhhhCceEecCCCCcCCCCcch
Q psy5105 17 PDFKQLAIEYPEFRKHLHQELSGKLKFNFQNPDALRIFTTT---------VLRKDFGLNVEIPPMRLVPTLPLR 81 (100)
Q Consensus 17 ~DF~~La~~~p~l~~~v~~~~~G~~~iDF~~~~Av~~Ltka---------LL~~dfgL~~~lP~~~LcP~iP~R 81 (100)
--|.+|-.+|-+...|.......|+.|.|++++|...-=+. -++.|||-..++-+.+|-||-|.+
T Consensus 25 ~~~e~Lf~~~~~~~tF~~lkSFRRirv~F~~~~~A~~AR~~Lh~~~f~g~~~r~YFgq~~~~~~~~L~pP~p~K 98 (104)
T 1wey_A 25 AKFESLFRTYDKDTTFQYFKSFKRVRINFSNPLSAADARLRLHKTEFLGKEMKLYFAQTLHIGSSHLAPPNPDK 98 (104)
T ss_dssp HHHHHHHHTTCSSCEEEEETTTTEEEEECSSTTHHHHHHHTSTTSEETTEECEEECCCCSSCCSCCSCCCCCCC
T ss_pred HHHHHHHHhhCcCcceeecCcceEEEEEeCChHHHHHHHHHhccceecCceeEEEecCCCCCcccccCCCCccc
Confidence 36889999999988888777789999999999886432222 244566665566788999998875
No 4
>3mi6_A Alpha-galactosidase; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium, hydrolase; 2.70A {Lactobacillus brevis}
Probab=68.63 E-value=17 Score=31.38 Aligned_cols=48 Identities=10% Similarity=0.251 Sum_probs=32.5
Q ss_pred HHHHhCCchhhchhhcCCC-------cEEeeCCCHHHHHHHHHHH--HhhhhCce-EecCC
Q psy5105 21 QLAIEYPEFRKHLHQELSG-------KLKFNFQNPDALRIFTTTV--LRKDFGLN-VEIPP 71 (100)
Q Consensus 21 ~La~~~p~l~~~v~~~~~G-------~~~iDF~~~~Av~~LtkaL--L~~dfgL~-~~lP~ 71 (100)
+|.+++|+ ++....+| ...+||++|++..-+...+ +..++|++ +.+.-
T Consensus 423 ~l~~~hPd---w~l~~~~g~~~~~r~~~vLD~tnPevr~~i~~~l~~ll~~~GIDy~K~D~ 480 (745)
T 3mi6_A 423 DLYQQHPD---WLIHAPKSTPTPGRHQFVLDMARPEVVDYLFKLMSQMIESANLDYIKWDM 480 (745)
T ss_dssp SHHHHCGG---GBCCCTTCCCCCSSSCEEBCTTCHHHHHHHHHHHHHHHHHHTCSEEEECC
T ss_pred HHHHhCcc---eEEEcCCCceeecCCeEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEECC
Confidence 46667776 23333332 3569999999999999888 56789987 44333
No 5
>2yfo_A Alpha-galactosidase-sucrose kinase agask; hydrolase; HET: GLA GAL; 1.35A {Ruminococcus gnavus E1} PDB: 2yfn_A*
Probab=62.00 E-value=39 Score=28.64 Aligned_cols=26 Identities=8% Similarity=0.125 Sum_probs=21.2
Q ss_pred EEeeCCCHHHHHHHHHHHH--hhhhCce
Q psy5105 41 LKFNFQNPDALRIFTTTVL--RKDFGLN 66 (100)
Q Consensus 41 ~~iDF~~~~Av~~LtkaLL--~~dfgL~ 66 (100)
..+||++|++..-+...+- ..++|++
T Consensus 446 ~~LD~t~Pea~~~~~~~l~~l~~~~GID 473 (720)
T 2yfo_A 446 LLLDFSRKEVRDCVFDQICVVLDQGKID 473 (720)
T ss_dssp EEBCTTSHHHHHHHHHHHHHHHTTSCCC
T ss_pred EEECCCCHHHHHHHHHHHHHHHHHcCCC
Confidence 4589999999988888874 4678886
No 6
>2pi6_A Chitinase-3-like protein 1; complex, signaling protein; HET: NAG MAN; 1.65A {Ovis aries} SCOP: c.1.8.5 d.26.3.1 PDB: 2dpe_A* 1sr0_A* 1zl1_A* 1zbk_A* 2dsu_A* 2dsv_A* 2dsw_A* 2fdm_A* 2g41_A* 2g8z_A* 2dt1_A* 1zbv_A* 1zu8_A* 2aos_A* 2b31_A* 1zbw_A* 2dt0_A* 2dsz_A* 2dt2_A* 2dt3_A* ...
Probab=51.82 E-value=12 Score=28.47 Aligned_cols=74 Identities=12% Similarity=0.182 Sum_probs=42.6
Q ss_pred HHHHHHhCCchhhchhhcCCCcEEeeC----CCHHHHHHHHHHHHh--hhhCce-EecCCCCcCCCCcchHHHHHHHHHH
Q psy5105 19 FKQLAIEYPEFRKHLHQELSGKLKFNF----QNPDALRIFTTTVLR--KDFGLN-VEIPPMRLVPTLPLRLNYILWIEDL 91 (100)
Q Consensus 19 F~~La~~~p~l~~~v~~~~~G~~~iDF----~~~~Av~~LtkaLL~--~dfgL~-~~lP~~~LcP~iP~R~nYI~wi~DL 91 (100)
|.+|.+++|.++-.+.....+..+-.| +|+++...+.+++.. +.||++ +||-=.+ |....|.||+..|++|
T Consensus 59 ~~~lk~~~p~lkvllsiGG~~~~s~~f~~~~~~~~~r~~fi~si~~~~~~~~fDGiDiDwE~--p~~~d~~~~~~ll~eL 136 (361)
T 2pi6_A 59 LNTLKNRNPKLKTLLSVGGWNFGPERFSKIASKTQSRRTFIKSVPPFLRTHGFDGLDLAWLY--PGRRDKRHLTTLVKEM 136 (361)
T ss_dssp HHHHHHHCTTCEEEEEEETTTSCHHHHHHHHTSHHHHHHHHHHHHHHHHHHTCSEEEEECSC--CCGGGHHHHHHHHHHH
T ss_pred HHHHHhcCCCCeEEEEECCCCCCchhHHHHhcCHHHHHHHHHHHHHHHHHcCCCeEEEeeec--CCchHHHHHHHHHHHH
Confidence 677888899998877553221101123 466666666655543 345554 3332221 2224899999999888
Q ss_pred Hhh
Q psy5105 92 LEA 94 (100)
Q Consensus 92 L~~ 94 (100)
=..
T Consensus 137 r~~ 139 (361)
T 2pi6_A 137 KAE 139 (361)
T ss_dssp HHH
T ss_pred HHH
Confidence 653
No 7
>3sim_A Protein, family 18 chitinase; family 18 plant chitinase, TIM barrel, chitin binding, glyco hydrolase, hydrolase; 2.10A {Crocus vernus}
Probab=43.07 E-value=44 Score=24.43 Aligned_cols=75 Identities=9% Similarity=0.085 Sum_probs=42.4
Q ss_pred cHHHHHHhCCchhhchhhcCCCc-EEeeCCC----HHHHHHHHHHH--HhhhhCce-EecCCCCcCCCCcchHHHHHHHH
Q psy5105 18 DFKQLAIEYPEFRKHLHQELSGK-LKFNFQN----PDALRIFTTTV--LRKDFGLN-VEIPPMRLVPTLPLRLNYILWIE 89 (100)
Q Consensus 18 DF~~La~~~p~l~~~v~~~~~G~-~~iDF~~----~~Av~~LtkaL--L~~dfgL~-~~lP~~~LcP~iP~R~nYI~wi~ 89 (100)
.|.+|.+++|.+|-.+.....+. ..--|.+ ++....+.+++ +.+.||++ +||-=.+.-| -.+.+|+..|.
T Consensus 65 ~~~~lK~~~~~lKvllSiGG~~~~~~~~~~~~~~~~~~r~~fi~si~~~l~~~gfDGiDiDwE~p~~--~d~~~~~~ll~ 142 (275)
T 3sim_A 65 QISAIKSSHPNVRVAVSLGGASVGSNTVQFQAASVDSWVSNAVTSLTRIIQRYNLDGIDIDYEHFQN--TDKNTFAECIG 142 (275)
T ss_dssp HHHHHHHHCTTEEEEEEEECSEETTEECCCCCSCHHHHHHHHHHHHHHHHHHTTCCEEEEECCCCTT--SCHHHHHHHHH
T ss_pred HHHHHHHhCCCCEEEEEEcCCCCCCcchhhhhhcCHHHHHHHHHHHHHHHHHhCCCeEEEEeecCCc--ccHHHHHHHHH
Confidence 45788999999988876533211 0111333 33334444443 23556665 5443333222 47899999999
Q ss_pred HHHhh
Q psy5105 90 DLLEA 94 (100)
Q Consensus 90 DLL~~ 94 (100)
+|-..
T Consensus 143 eLr~~ 147 (275)
T 3sim_A 143 RLITT 147 (275)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88654
No 8
>1mdy_A Protein (MYOD BHLH domain); protein-DNA complex, transcription/DNA complex; HET: DNA; 2.80A {Mus musculus} SCOP: a.38.1.1 PDB: 1mdy_B*
Probab=42.35 E-value=12 Score=22.83 Aligned_cols=12 Identities=33% Similarity=0.575 Sum_probs=10.5
Q ss_pred HHHHHHHHHHHh
Q psy5105 82 LNYILWIEDLLE 93 (100)
Q Consensus 82 ~nYI~wi~DLL~ 93 (100)
.+||..|+++|.
T Consensus 56 i~YI~~L~~~L~ 67 (68)
T 1mdy_A 56 IRYIEGLQALLR 67 (68)
T ss_dssp HHHHHHHHHTTC
T ss_pred HHHHHHHHHHHc
Confidence 789999999875
No 9
>2ql2_B Neurod1, neurogenic differentiation factor 1; basic-helix-loop-helix; HET: DNA; 2.50A {Mus musculus}
Probab=40.29 E-value=16 Score=21.59 Aligned_cols=13 Identities=31% Similarity=0.595 Sum_probs=11.4
Q ss_pred HHHHHHHHHHHhh
Q psy5105 82 LNYILWIEDLLEA 94 (100)
Q Consensus 82 ~nYI~wi~DLL~~ 94 (100)
.+||..++++|..
T Consensus 47 i~YI~~L~~~L~~ 59 (60)
T 2ql2_B 47 KNYIWALSEILRS 59 (60)
T ss_dssp HHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhc
Confidence 7999999999864
No 10
>1nar_A Narbonin; plant SEED protein; 1.80A {Vicia narbonensis} SCOP: c.1.8.5
Probab=39.01 E-value=27 Score=25.78 Aligned_cols=68 Identities=12% Similarity=0.102 Sum_probs=41.0
Q ss_pred cHHHHHHhCCchhhchhhcCCCcEEeeC---CCHHHHHHHHHHHH--hhhhC------c-----eEecCCCCcCCCCcch
Q psy5105 18 DFKQLAIEYPEFRKHLHQELSGKLKFNF---QNPDALRIFTTTVL--RKDFG------L-----NVEIPPMRLVPTLPLR 81 (100)
Q Consensus 18 DF~~La~~~p~l~~~v~~~~~G~~~iDF---~~~~Av~~LtkaLL--~~dfg------L-----~~~lP~~~LcP~iP~R 81 (100)
.|.+|.+++|.++-.+.....+. +-.| +++++...+.+++. .+.|| + +||-|.. .
T Consensus 67 ~~~~lk~~~~~~KvllSiGG~~~-s~~fs~~~~~~~r~~f~~s~~~~~~~~g~~~~~~fDGiDiDwE~p~~-------d- 137 (290)
T 1nar_A 67 KVKNLKRRHPEVKVVISIGGRGV-NTPFDPAEENVWVSNAKESLKLIIQKYSDDSGNLIDGIDIHYEHIRS-------D- 137 (290)
T ss_dssp HHHHHHHHCTTCEEEEEEEESST-TSCBCBSCHHHHHHHHHHHHHHHHHHSEETTEECCCEEEEEESCBCS-------S-
T ss_pred HHHHHHHHCCCceEEEEEECCCC-CCCeeccCCHHHHHHHHHHHHHHHHHhCCCcCCccceEEEeccCCCC-------h-
Confidence 36788888999887775432211 1135 45666666666654 35566 4 3555531 2
Q ss_pred HHHHHHHHHHHhh
Q psy5105 82 LNYILWIEDLLEA 94 (100)
Q Consensus 82 ~nYI~wi~DLL~~ 94 (100)
.||+..|.+|-..
T Consensus 138 ~~~~~ll~~Lr~~ 150 (290)
T 1nar_A 138 EPFATLMGQLITE 150 (290)
T ss_dssp TTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 7888888887543
No 11
>1wb0_A Chitinase 1, chitotriosidase 1; cyclopentapeptide inhibitors, chitinase inhibitors, carbohyd metabolism, chitin degradation, chitin-binding; HET: VR0 MEA; 1.65A {Homo sapiens} SCOP: c.1.8.5 d.26.3.1 PDB: 1waw_A* 1guv_A 1lg2_A 1lg1_A 1lq0_A 1hki_A* 1hkj_A* 1hkm_A* 1hkk_A*
Probab=38.91 E-value=24 Score=27.72 Aligned_cols=76 Identities=17% Similarity=0.242 Sum_probs=43.6
Q ss_pred HHHHHHhCCchhhchhhcCCCcEEeeC----CCHHHHHHHHHHHHh--hhhCc-----eEecCCCCcCCCCcchHHHHHH
Q psy5105 19 FKQLAIEYPEFRKHLHQELSGKLKFNF----QNPDALRIFTTTVLR--KDFGL-----NVEIPPMRLVPTLPLRLNYILW 87 (100)
Q Consensus 19 F~~La~~~p~l~~~v~~~~~G~~~iDF----~~~~Av~~LtkaLL~--~dfgL-----~~~lP~~~LcP~iP~R~nYI~w 87 (100)
|.+|.+++|.++-.+.....+..+-.| +++++.+.+.+++.. +.||+ +||-|..+=.+ .-.|.||+..
T Consensus 59 ~~~lk~~~p~lKvllsiGGw~~~s~~fs~~~~~~~~R~~fi~siv~~l~~~gfDGiDiDwEyP~~~g~~-~~d~~nf~~l 137 (445)
T 1wb0_A 59 FNGLKKMNPKLKTLLAIGGWNFGTQKFTDMVATANNRQTFVNSAIRFLRKYSFDGLDLDWEYPGSQGSP-AVDKERFTTL 137 (445)
T ss_dssp HHHGGGTCTTCEEEEEEECTTTCSHHHHHHHTSHHHHHHHHHHHHHHHHHTTCCEEEEECSCTTSTTCC-TTHHHHHHHH
T ss_pred HHHHHHhCCCCeEEEEECCCCCCCchHHHHHcCHHHHHHHHHHHHHHHHHcCCCeEEEeCccCCCCCCC-HHHHHHHHHH
Confidence 556677888888776543221111123 466666666665543 34554 35556542111 1258999999
Q ss_pred HHHHHhhc
Q psy5105 88 IEDLLEAN 95 (100)
Q Consensus 88 i~DLL~~~ 95 (100)
|++|-...
T Consensus 138 l~eLr~~l 145 (445)
T 1wb0_A 138 VQDLANAF 145 (445)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99987643
No 12
>3g6m_A Chitinase, crchi1; inhibitor, caffeine, glycosidase, hydrolas hydrolase inhibitor complex; HET: CFF; 1.65A {Bionectria ochroleuca} PDB: 3g6l_A*
Probab=34.69 E-value=46 Score=25.65 Aligned_cols=74 Identities=15% Similarity=0.177 Sum_probs=44.9
Q ss_pred cHHHHHHhCCchhhchhhcCCCcEEee----CCCHHHHHHHHHHHHh--hhhCce-EecCCCCcCCCCc-chHHHHHHHH
Q psy5105 18 DFKQLAIEYPEFRKHLHQELSGKLKFN----FQNPDALRIFTTTVLR--KDFGLN-VEIPPMRLVPTLP-LRLNYILWIE 89 (100)
Q Consensus 18 DF~~La~~~p~l~~~v~~~~~G~~~iD----F~~~~Av~~LtkaLL~--~dfgL~-~~lP~~~LcP~iP-~R~nYI~wi~ 89 (100)
.|.+|.+++|.++-.+.....+ .+-. .++++..+.+.++++. +.||++ +||-=.+ |.-+ .+.||+..|+
T Consensus 94 ~~~~lk~~~~~lKvllsiGGw~-~s~~fs~~~~~~~~R~~fi~siv~~l~~~gfDGiDiDwE~--p~~~~d~~n~~~ll~ 170 (406)
T 3g6m_A 94 QLYKLKKANRSLKIMLSIGGWT-WSTNFPAAASTEATRATFAKTAVEFMKDWGFDGIDVDWEY--PASETDANNMVLLLQ 170 (406)
T ss_dssp HHHHHHHHCTTCEEEEEEECSS-SCTTHHHHTSSHHHHHHHHHHHHHHHHHHTCSEEEEECSC--CCSHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCeEEEEEcCCC-CCchHHHHhCCHHHHHHHHHHHHHHHHHcCCcEEEEEEEC--CCccchhhHHHHHHH
Confidence 3667888999998887653222 1112 3467777777766643 456654 4443222 2223 5789999999
Q ss_pred HHHhh
Q psy5105 90 DLLEA 94 (100)
Q Consensus 90 DLL~~ 94 (100)
+|=+.
T Consensus 171 eLr~~ 175 (406)
T 3g6m_A 171 RVRQE 175 (406)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88654
No 13
>1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6
Probab=32.93 E-value=39 Score=20.31 Aligned_cols=39 Identities=13% Similarity=0.089 Sum_probs=20.7
Q ss_pred CCcEEeeCCCHHHHHHHHHHHHhhhhCceEecCCCCcCCC
Q psy5105 38 SGKLKFNFQNPDALRIFTTTVLRKDFGLNVEIPPMRLVPT 77 (100)
Q Consensus 38 ~G~~~iDF~~~~Av~~LtkaLL~~dfgL~~~lP~~~LcP~ 77 (100)
+|..+|+|..--.+..+-..-++.=+.|--.||. .|+||
T Consensus 56 d~dG~i~~~EF~~~~~~~~~~~~~g~~lP~~lP~-~l~pp 94 (95)
T 1c07_A 56 KDCGKLSKDQFALAFHLISQKLIKGIDPPHVLTP-EMIPP 94 (95)
T ss_dssp TCSSSEETTTHHHHHHHHHHHHTSCCCCCSSCCT-TTSCC
T ss_pred CCCCcCCHHHHHHHHHHHHHHHHcCCCCCCcCCc-cccCC
Confidence 3334688888654443333222233444456776 67775
No 14
>4aya_A DNA-binding protein inhibitor ID-2; cell cycle; 2.10A {Homo sapiens}
Probab=32.16 E-value=30 Score=22.76 Aligned_cols=38 Identities=24% Similarity=0.391 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHhhhhCceEecCCCCcCCCCcc------------hHHHHHHHHHHHhhcC
Q psy5105 49 DALRIFTTTVLRKDFGLNVEIPPMRLVPTLPL------------RLNYILWIEDLLEANQ 96 (100)
Q Consensus 49 ~Av~~LtkaLL~~dfgL~~~lP~~~LcP~iP~------------R~nYI~wi~DLL~~~~ 96 (100)
.-++.+|.|.-.-. .++|++|. -.+||..++++|....
T Consensus 35 ~Rm~~lN~AF~~LR----------~~vP~~p~~kKLSKIETLRlAi~YI~~Lq~~L~~~~ 84 (97)
T 4aya_A 35 SLLYNMNDCYSKLK----------ELVPSIPQNKKVSKMEILQHVIDYILDLQIALDSHL 84 (97)
T ss_dssp HHHHHHHHHHHHHH----------HHCTTSCSSSCCCHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHH----------HHCCCCCCCCcccHHHHHHHHHHHHHHHHHHHhcCC
Confidence 46677887753221 23555554 1799999999998654
No 15
>3fy1_A Amcase, TSA1902, acidic mammalian chitinase; structure, crystallography, asthma,inhibitor, chitin degradation, methylallosamidin; HET: NA1 NAA AMI; 1.70A {Homo sapiens} PDB: 3fxy_A* 3rm4_A* 3rm8_A* 3rm9_A* 3rme_A* 2ybt_A* 2ybu_A*
Probab=27.92 E-value=40 Score=26.01 Aligned_cols=75 Identities=19% Similarity=0.303 Sum_probs=43.4
Q ss_pred HHHHHHhCCchhhchhhcCCCcEEeeC----CCHHHHHHHHHHHHh--hhhCce-----EecCCCCcCCCCcchHHHHHH
Q psy5105 19 FKQLAIEYPEFRKHLHQELSGKLKFNF----QNPDALRIFTTTVLR--KDFGLN-----VEIPPMRLVPTLPLRLNYILW 87 (100)
Q Consensus 19 F~~La~~~p~l~~~v~~~~~G~~~iDF----~~~~Av~~LtkaLL~--~dfgL~-----~~lP~~~LcP~iP~R~nYI~w 87 (100)
|.+|.+++|.+|-.+.....+..+-.| +++++...+.++++. +.||++ ||-|..+=.++ -.|.||+..
T Consensus 59 ~~~lK~~~p~lKvllSiGGw~~~s~~f~~~~~~~~~R~~fi~siv~~l~~~gfDGiDiDwEyP~~~g~~~-~d~~nf~~l 137 (395)
T 3fy1_A 59 FNGLKNKNSQLKTLLAIGGWNFGTAPFTAMVSTPENRQTFITSVIKFLRQYEFDGLDFDWEYPGSRGSPP-QDKHLFTVL 137 (395)
T ss_dssp HHHGGGSCTTCEEEEEEECGGGCSHHHHHHHTSHHHHHHHHHHHHHHHHHHTCSEEEEECSCTTSTTCCT-THHHHHHHH
T ss_pred HHHHHHhCCCCEEEEEEcCCCCCCchhhHHhCCHHHHHHHHHHHHHHHHhcCCCeEEEEeEcCCCCCCCh-hHHHHHHHH
Confidence 566777888888776542211001112 466666666665542 345543 56575532222 368999999
Q ss_pred HHHHHhh
Q psy5105 88 IEDLLEA 94 (100)
Q Consensus 88 i~DLL~~ 94 (100)
|++|-+.
T Consensus 138 l~eLr~~ 144 (395)
T 3fy1_A 138 VQEMREA 144 (395)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9998654
No 16
>1vf8_A YM1, secretory protein; chitinase, CHI-lectin, structural plasticity, functional versatility, immune system; 1.31A {Mus musculus} SCOP: c.1.8.5 d.26.3.1 PDB: 1e9l_A
Probab=27.56 E-value=42 Score=25.55 Aligned_cols=76 Identities=17% Similarity=0.233 Sum_probs=42.5
Q ss_pred HHHHHHhCCchhhchhhcCCCcEEeeC----CCHHHHHHHHHHHHh--hhhCce-----EecCCCCcCCCCcchHHHHHH
Q psy5105 19 FKQLAIEYPEFRKHLHQELSGKLKFNF----QNPDALRIFTTTVLR--KDFGLN-----VEIPPMRLVPTLPLRLNYILW 87 (100)
Q Consensus 19 F~~La~~~p~l~~~v~~~~~G~~~iDF----~~~~Av~~LtkaLL~--~dfgL~-----~~lP~~~LcP~iP~R~nYI~w 87 (100)
|.+|.+++|.++-.+.....+..+-.| +|+++.+.+.+++.. +.||++ ||-|..+=.+ .-.|.||+..
T Consensus 59 ~~~lk~~~~~lkvllsiGG~~~~s~~fs~~~~~~~~R~~fi~si~~~~~~~~fDGiDiDwEyp~~~g~~-~~d~~n~~~l 137 (377)
T 1vf8_A 59 LNGLKDKNTELKTLLAIGGWKFGPAPFSAMVSTPQNRQIFIQSVIRFLRQYNFDGLNLDWQYPGSRGSP-PKDKHLFSVL 137 (377)
T ss_dssp HHHGGGTCTTCEEEEEEECTTTCSHHHHHHHTSHHHHHHHHHHHHHHHHHTTCCEEEEECSCTTSTTCC-THHHHHHHHH
T ss_pred HHHHHhhCCCCeEEEEECCCCCCCchHhHHhcCHHHHHHHHHHHHHHHHHcCCCeEEEeeeCCCcCCCC-HHHHHHHHHH
Confidence 456667788888776543221101123 466666666655542 345543 5556532111 1258999999
Q ss_pred HHHHHhhc
Q psy5105 88 IEDLLEAN 95 (100)
Q Consensus 88 i~DLL~~~ 95 (100)
|++|=...
T Consensus 138 l~eLr~~l 145 (377)
T 1vf8_A 138 VKEMRKAF 145 (377)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99887643
No 17
>4ay1_A Chitinase-3-like protein 2; chilectin, lectin, chitooligosaccharide, pseudochitinase, HY; HET: NAG; 1.95A {Homo sapiens}
Probab=25.93 E-value=50 Score=24.82 Aligned_cols=69 Identities=13% Similarity=0.171 Sum_probs=43.1
Q ss_pred HHHHHHhCCchhhchhhcCCCcEEeeCC----CHHHHHHHHHHHHh--hhhCce-----EecCCCCcCCCCcchHHHHHH
Q psy5105 19 FKQLAIEYPEFRKHLHQELSGKLKFNFQ----NPDALRIFTTTVLR--KDFGLN-----VEIPPMRLVPTLPLRLNYILW 87 (100)
Q Consensus 19 F~~La~~~p~l~~~v~~~~~G~~~iDF~----~~~Av~~LtkaLL~--~dfgL~-----~~lP~~~LcP~iP~R~nYI~w 87 (100)
|.+|.+++|.+|-.+..-..+..+-.|+ +++.-+.+.++++. +.||++ ||-| .-..|.||+.-
T Consensus 60 ~~~lK~~~p~lKvllSiGGw~~~s~~Fs~~~~~~~~R~~Fi~siv~~~~~~~fDGiDiDWEyP------~~~d~~~~~~l 133 (365)
T 4ay1_A 60 INSLKTKNPKLKILLSIGGYLFGSKGFHPMVDSSTSRLEFINSIILFLRNHNFDGLDVSWIYP------DQKENTHFTVL 133 (365)
T ss_dssp HHHHHHHCTTCEEEEEEEETTTTTGGGTTGGGSHHHHHHHHHHHHHHHHHTTCCEEEEEESCC------HHHHHHHHHHH
T ss_pred HHHHHHHCCCCEEEEEEeCCCCCCchHHHHHcCHHHHHHHHHHHHHHHHhcCCceEEEeeecC------CcccccccHHH
Confidence 5678899999998876532211111344 56666666665543 345543 5555 33578999999
Q ss_pred HHHHHh
Q psy5105 88 IEDLLE 93 (100)
Q Consensus 88 i~DLL~ 93 (100)
+++|..
T Consensus 134 l~elr~ 139 (365)
T 4ay1_A 134 IHELAE 139 (365)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 988854
No 18
>1kfw_A Chitinase B; TIM barrel, hydrolase; 1.74A {Arthrobacter SP} SCOP: c.1.8.5 d.26.3.1
Probab=25.16 E-value=1e+02 Score=24.11 Aligned_cols=75 Identities=13% Similarity=0.113 Sum_probs=43.9
Q ss_pred HHHHHHhCCchhhchhhcCCCcEEeeC----CCHHHHHHHHHHHHhhh------------------hC---c--eEecCC
Q psy5105 19 FKQLAIEYPEFRKHLHQELSGKLKFNF----QNPDALRIFTTTVLRKD------------------FG---L--NVEIPP 71 (100)
Q Consensus 19 F~~La~~~p~l~~~v~~~~~G~~~iDF----~~~~Av~~LtkaLL~~d------------------fg---L--~~~lP~ 71 (100)
|.+|.+++|.++-.+.....+ .+-.| +++++.+.+.++++.-- || | +||-|.
T Consensus 108 l~~lK~~~p~lKvllSiGGw~-~s~~fs~~~~~~~~R~~Fi~siv~~l~~~~l~~~~~~g~~g~~~~~fDGiDiDwEyP~ 186 (435)
T 1kfw_A 108 LKQLKAKNPKLKVMISLGGWT-WSKNFSKAAATEASRQKLVSSCIDLYIKGNLPNFEGRGGAGAAAGIFDGIDIDWEWPG 186 (435)
T ss_dssp HHHHHTTCTTCEEEEEEECSS-SCTTHHHHTSSHHHHHHHHHHHHHHHTSCCEEEETTEEETTTTTTTCCEEEEECSCTT
T ss_pred HHHHHHhCCCCEEEEEEcCCC-CcchhhHHhCCHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCceEEeeeCCC
Confidence 567778899998877653221 12234 46776666666554322 23 3 366675
Q ss_pred CC---cCCC---CcchHHHHHHHHHHHhh
Q psy5105 72 MR---LVPT---LPLRLNYILWIEDLLEA 94 (100)
Q Consensus 72 ~~---LcP~---iP~R~nYI~wi~DLL~~ 94 (100)
.. =|.. --.+.||+..|++|=..
T Consensus 187 ~~~g~~g~~~~p~~d~~nf~~ll~eLr~~ 215 (435)
T 1kfw_A 187 TNSGLAGNGVDTVNDRANFKALLAEFRKQ 215 (435)
T ss_dssp SSCSSTTCCCCTTTHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCcHHHHHHHHHHHHHHHHh
Confidence 32 1111 13689999999998654
No 19
>1vm6_A DHPR, dihydrodipicolinate reductase; TM1520, structural genomics, protein structure initiative, PSI, joint center for structu genomics; HET: NAD PG4; 2.27A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3
Probab=24.78 E-value=42 Score=24.93 Aligned_cols=26 Identities=15% Similarity=0.266 Sum_probs=20.7
Q ss_pred cEEeeCCCHHHHHHHHHHHHhhhhCceE
Q psy5105 40 KLKFNFQNPDALRIFTTTVLRKDFGLNV 67 (100)
Q Consensus 40 ~~~iDF~~~~Av~~LtkaLL~~dfgL~~ 67 (100)
.+-|||+.|+++.+..+..++. |+.+
T Consensus 55 DVvIDFT~P~a~~~~~~~~~~~--g~~~ 80 (228)
T 1vm6_A 55 DVVIDFSSPEALPKTVDLCKKY--RAGL 80 (228)
T ss_dssp SEEEECSCGGGHHHHHHHHHHH--TCEE
T ss_pred CEEEECCCHHHHHHHHHHHHHc--CCCE
Confidence 4789999999999988877654 5553
No 20
>1uw4_A UPF3X; nonsense mediated mRNA decay protein, RNA-binding protein, N domain, MIF4G domain; 1.95A {Homo sapiens} SCOP: d.58.7.4
Probab=24.59 E-value=48 Score=21.07 Aligned_cols=21 Identities=19% Similarity=0.433 Sum_probs=17.6
Q ss_pred CCcEEeeCCCHHHHHHHHHHH
Q psy5105 38 SGKLKFNFQNPDALRIFTTTV 58 (100)
Q Consensus 38 ~G~~~iDF~~~~Av~~LtkaL 58 (100)
..+..|+|+|++.+.++.+..
T Consensus 45 ~SRaYi~f~~~e~v~~f~~~~ 65 (91)
T 1uw4_A 45 YARAYINFKNQEDIILFRDRF 65 (91)
T ss_dssp CEEEEEEESSSHHHHHHHHHH
T ss_pred ceEEEEEeCCHHHHHHHHHHh
Confidence 358899999999999887764
No 21
>3qok_A Putative chitinase II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, glycosyl hydrolases family 18; 2.60A {Klebsiella pneumoniae subsp}
Probab=24.14 E-value=1.6e+02 Score=22.52 Aligned_cols=75 Identities=19% Similarity=0.260 Sum_probs=45.6
Q ss_pred HHHHHHhCCchhhchhhcCCCcEEee----CCCHHHHHHHHHHHHh--hhhCce-----EecCCCCc--CCC--CcchHH
Q psy5105 19 FKQLAIEYPEFRKHLHQELSGKLKFN----FQNPDALRIFTTTVLR--KDFGLN-----VEIPPMRL--VPT--LPLRLN 83 (100)
Q Consensus 19 F~~La~~~p~l~~~v~~~~~G~~~iD----F~~~~Av~~LtkaLL~--~dfgL~-----~~lP~~~L--cP~--iP~R~n 83 (100)
|.+|.+++|.++-.+.....+ +-. .++++..+.+.+++.. +.||++ ||-|...= |+. --.|.|
T Consensus 98 ~~~lk~~~p~lkvllsiGG~~--s~~f~~~~~~~~~r~~fi~si~~~~~~~gfDGiDiDwE~p~~~~~~~~~~~~~d~~~ 175 (420)
T 3qok_A 98 LPALRKQNPDLKVLLSVGGWG--ARGFSGAAATAESRAVFIRSAQKIIQQYGLDGIDLDWEFPVNGAWGLVASQPADRDN 175 (420)
T ss_dssp HHHHHHHCTTCEEEEEEECTT--CCCHHHHTSSHHHHHHHHHHHHHHHHHHTCSEEEEECSCTTTHHHHTSCCCTTHHHH
T ss_pred HHHHHHhCCCCEEEEEECCCC--CcchhhhhCCHHHHHHHHHHHHHHHHhcCCCceEEEEeCCCCCCCCCCCCChhHHHH
Confidence 889999999998887653322 112 3466666666665543 455554 44443210 111 234899
Q ss_pred HHHHHHHHHhhc
Q psy5105 84 YILWIEDLLEAN 95 (100)
Q Consensus 84 YI~wi~DLL~~~ 95 (100)
|+..|++|=...
T Consensus 176 ~~~ll~eLr~~l 187 (420)
T 3qok_A 176 FTALLKSLREAV 187 (420)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 999999986654
No 22
>2gsj_A Protein PPL-2; mimosoideae, chimerolectin, endochitinase, glycosyl hydrolase family 18, equilibrium sedimentation, X-RAY; 1.73A {Parkia platycephala}
Probab=23.19 E-value=1.2e+02 Score=22.44 Aligned_cols=67 Identities=12% Similarity=0.039 Sum_probs=39.4
Q ss_pred HHHHH-hCCchhhchhhcCCCcEEeeCCCHHHHHHHHHHH------------HhhhhCce-EecCCCCcCCCCcchHHHH
Q psy5105 20 KQLAI-EYPEFRKHLHQELSGKLKFNFQNPDALRIFTTTV------------LRKDFGLN-VEIPPMRLVPTLPLRLNYI 85 (100)
Q Consensus 20 ~~La~-~~p~l~~~v~~~~~G~~~iDF~~~~Av~~LtkaL------------L~~dfgL~-~~lP~~~LcP~iP~R~nYI 85 (100)
.++.. +.+.+|-.+..-.. ..++.|++++..+.+.+.+ +..+||++ +||-=.+ |. .+|.
T Consensus 62 ~~i~~lq~~g~KVllSiGG~-~gs~~~~s~~~~~~fa~s~~~~f~~~~s~~~~~~~~~~DGiDiDwE~--p~----~~~~ 134 (271)
T 2gsj_A 62 DGIRACQRRGIKVMLSIGGG-AGSYSLSSVQDARSVADYIWNNFLGGRSSSRPLGDAVLDGVDFDIEH--GG----AYYD 134 (271)
T ss_dssp HHHHHHHTTTCEEEEEEECS-SSCBCCCSHHHHHHHHHHHHHHHSSSCCTTCTTCSCCCSEEEEECCS--CC----TTHH
T ss_pred HHHHHHHhCCCEEEEEeCCC-CCceecCCHHHHHHHHHHHHHHhcCCcchhhhHHHcCCceEEEeecC--ch----HHHH
Confidence 34444 45555555443221 1235688888888888887 44678876 5554333 11 6777
Q ss_pred HHHHHHHh
Q psy5105 86 LWIEDLLE 93 (100)
Q Consensus 86 ~wi~DLL~ 93 (100)
.-++.|=+
T Consensus 135 ~l~~~Lr~ 142 (271)
T 2gsj_A 135 ALARRLSE 142 (271)
T ss_dssp HHHHHHHG
T ss_pred HHHHHHHH
Confidence 77776644
No 23
>2l08_A Regulator of nonsense transcripts 3A; NESG, nonsense regulator, structural genomics, PSI-2, protei structure initiative; NMR {Homo sapiens}
Probab=21.55 E-value=69 Score=20.82 Aligned_cols=20 Identities=30% Similarity=0.617 Sum_probs=16.9
Q ss_pred CCcEEeeCCCHHHHHHHHHH
Q psy5105 38 SGKLKFNFQNPDALRIFTTT 57 (100)
Q Consensus 38 ~G~~~iDF~~~~Av~~Ltka 57 (100)
..++.|+|+|++.+.++.+.
T Consensus 53 ~SRAYI~F~~~edv~~F~~~ 72 (97)
T 2l08_A 53 YSRAYINFRNPDDILLFRDR 72 (97)
T ss_dssp CCCCEEEESCHHHHHHHHHH
T ss_pred ceEEEEEeCCHHHHHHHHHH
Confidence 35789999999999988765
No 24
>1eok_A Endo-beta-N-acetylglucosaminidase F3; alpha/beta-barrel, hydrolase; 1.80A {Elizabethkingia meningoseptica} SCOP: c.1.8.5 PDB: 1eom_A*
Probab=21.43 E-value=87 Score=22.87 Aligned_cols=55 Identities=13% Similarity=0.278 Sum_probs=35.9
Q ss_pred EeeCCCH-----HHHHHHHHHH---HhhhhCce-EecCCCC------cCCCCcc----------------hHHHHHHHHH
Q psy5105 42 KFNFQNP-----DALRIFTTTV---LRKDFGLN-VEIPPMR------LVPTLPL----------------RLNYILWIED 90 (100)
Q Consensus 42 ~iDF~~~-----~Av~~LtkaL---L~~dfgL~-~~lP~~~------LcP~iP~----------------R~nYI~wi~D 90 (100)
+..|++. ++.+.+.+++ +.+.||++ +||-=.+ =.|..|+ ..+++..|.+
T Consensus 89 ~~~~~~~~~~~~~~r~~fa~s~~~~~l~~yg~DGiDiDwEy~~~~~~~~~~~pg~~~~g~~~~~~~~~~~~~~~~~~l~e 168 (290)
T 1eok_A 89 DVSWQSSKPGGFASAAAYGDAIKSIVIDKWKLDGISLDIEHSGAKPNPIPTFPGYAATGYNGWYSGSMAATPAFLNVISE 168 (290)
T ss_dssp CGGGGSSSGGGSSSHHHHHHHHHHHHTTTTCCCEEEEECCCCCCCCSSCCCCCCHHHHSCSSCCTTSCCCCHHHHHHHHH
T ss_pred CcCCCCccccchhHHHHHHHHHHHHHHHhcCCCcEEEecCCCCcccccccccccccccccccccCcchHHHHHHHHHHHH
Confidence 3468877 7778888888 66888876 5553222 1133333 4789999998
Q ss_pred HHhhcC
Q psy5105 91 LLEANQ 96 (100)
Q Consensus 91 LL~~~~ 96 (100)
|.+..+
T Consensus 169 l~~~~~ 174 (290)
T 1eok_A 169 LTKYFG 174 (290)
T ss_dssp HTTTSS
T ss_pred HHHHhC
Confidence 876543
No 25
>3oa5_A CHI1; TIM barrel, hydrolase; HET: 2PE; 1.74A {Yersinia} PDB: 4a5q_A
Probab=21.09 E-value=1.2e+02 Score=25.26 Aligned_cols=76 Identities=16% Similarity=0.120 Sum_probs=44.8
Q ss_pred ccHHHHHHhCCchhhchhhcCCCcEEeeC----CCHHHHHHHHHHHHh--hhhC-c-----eEecCCCCcC--C-CCcch
Q psy5105 17 PDFKQLAIEYPEFRKHLHQELSGKLKFNF----QNPDALRIFTTTVLR--KDFG-L-----NVEIPPMRLV--P-TLPLR 81 (100)
Q Consensus 17 ~DF~~La~~~p~l~~~v~~~~~G~~~iDF----~~~~Av~~LtkaLL~--~dfg-L-----~~~lP~~~Lc--P-~iP~R 81 (100)
-.|.+|.+++|.++-.+.....+. +-.| ++++..+.+.++++. +.|| + +||-|...=- | .--.|
T Consensus 226 ~~l~~LK~~np~LKvllSIGGw~~-S~~Fs~~~s~~~~R~~Fi~siv~~l~~yg~fDGIDIDWEyP~~~g~~n~~~~~D~ 304 (574)
T 3oa5_A 226 GGFRLLHEADKELEFSLSIGGWSM-SGLFSEIAKDEILRTNFVEGIKDFFQRFPMFSHLDIDWEYPGSIGAGNPNSPDDG 304 (574)
T ss_dssp HHHHHHHHHCTTCEEEEEEECGGG-CTTHHHHHHCHHHHHHHHHHHHHHHHHCTTCCEEEEECSCTTSCTTTCCCCTTHH
T ss_pred HHHHHHHHHCCCCEEEEEECCCCC-cchhHHHhCCHHHHHHHHHHHHHHHHHcCCCceEEEEEEeccccccCCCCCHHHH
Confidence 346788999999988775532211 1123 356666666665542 4454 3 4666643211 1 11248
Q ss_pred HHHHHHHHHHHh
Q psy5105 82 LNYILWIEDLLE 93 (100)
Q Consensus 82 ~nYI~wi~DLL~ 93 (100)
.||+..|++|=.
T Consensus 305 ~nf~~LLkeLR~ 316 (574)
T 3oa5_A 305 ANFAILIQQITD 316 (574)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999999866
No 26
>1edq_A Chitinase A; beta-alpha (TIM) barrel, hydrolase; 1.55A {Serratia marcescens} SCOP: b.1.18.2 c.1.8.5 d.26.3.1 PDB: 1ffq_A* 1ffr_A* 1ehn_A* 1ctn_A 1k9t_A* 1eib_A* 2wlz_A* 2wly_A* 2wm0_A* 2wk2_A* 1nh6_A* 1x6l_A 1rd6_A 1x6n_A*
Probab=20.95 E-value=1.7e+02 Score=23.62 Aligned_cols=75 Identities=15% Similarity=0.121 Sum_probs=43.9
Q ss_pred HHHHHHhCCchhhchhhcCCCc--EEeeCCCHHHHHHHHHHHHh--hhhC----c--eEecCCCC-----cCCCCcchHH
Q psy5105 19 FKQLAIEYPEFRKHLHQELSGK--LKFNFQNPDALRIFTTTVLR--KDFG----L--NVEIPPMR-----LVPTLPLRLN 83 (100)
Q Consensus 19 F~~La~~~p~l~~~v~~~~~G~--~~iDF~~~~Av~~LtkaLL~--~dfg----L--~~~lP~~~-----LcP~iP~R~n 83 (100)
|.+|.+++|.+|-.+.....+. ..-..++++....+.+++.. +.|| | +||-|... ...+ -.|.|
T Consensus 233 l~~lK~~~p~lKvllSiGGw~~s~~F~~~~~~~~R~~Fi~siv~~l~~yg~fDGIDIDWEyP~~~g~~~~~g~~-~D~~n 311 (540)
T 1edq_A 233 LMALKQAHPDLKILPSIGGWTLSDPFFFMGDKVKRDRFVGSVKEFLQTWKFFDGVDIDWEFPGGKGANPNLGSP-QDGET 311 (540)
T ss_dssp HHHHHHHCTTCEEEEEEECSSSCGGGGGTTSHHHHHHHHHHHHHHHHHCTTCCEEEEECSCTTSCSSCTTCCCT-THHHH
T ss_pred HHHHHHhCCCCeEEEEEeCCcCCCcchhhcCHHHHHHHHHHHHHHHHHcCCCceEEEEEEccccCCCCCCCCCH-HHHHH
Confidence 6678889999988775432211 01124567666666655432 3333 3 46767532 2222 26899
Q ss_pred HHHHHHHHHhh
Q psy5105 84 YILWIEDLLEA 94 (100)
Q Consensus 84 YI~wi~DLL~~ 94 (100)
|+..|++|=..
T Consensus 312 f~~ll~eLr~~ 322 (540)
T 1edq_A 312 YVLLMKELRAM 322 (540)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999988653
No 27
>3e70_C DPA, signal recognition particle receptor; FTSY, SRP-GTPase, protein-targeting, transport protein; HET: GDP; 1.97A {Pyrococcus furiosus} PDB: 3dmd_B 3dm9_B*
Probab=20.73 E-value=34 Score=25.99 Aligned_cols=29 Identities=17% Similarity=0.208 Sum_probs=23.3
Q ss_pred CCcEEeeCCCH-HHHHHHHHHHHhhhhCce
Q psy5105 38 SGKLKFNFQNP-DALRIFTTTVLRKDFGLN 66 (100)
Q Consensus 38 ~G~~~iDF~~~-~Av~~LtkaLL~~dfgL~ 66 (100)
-|+..++++|. +++++|-.+||..|+|.+
T Consensus 42 ~~~~~~~~~~~~~~~~~~~~~Ll~adv~~~ 71 (328)
T 3e70_C 42 ILTVEIKEKDVDKALDELEIDLLEADVALE 71 (328)
T ss_dssp CCEEECCHHHHHHHHHHHHHHHHHTTCCHH
T ss_pred HhhccCCHHHHHHHHHHHHHHHHHcCCCHH
Confidence 34567887774 578999999999999987
No 28
>2eo2_A Adult MALE hypothalamus cDNA, riken FULL-length enriched library, clone:A230045M11...; FTHFSDC1, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=20.28 E-value=13 Score=23.40 Aligned_cols=28 Identities=21% Similarity=0.078 Sum_probs=18.5
Q ss_pred CCcCCCCcchHHHHHHHHHHHhhcCCCC
Q psy5105 72 MRLVPTLPLRLNYILWIEDLLEANQISS 99 (100)
Q Consensus 72 ~~LcP~iP~R~nYI~wi~DLL~~~~~~~ 99 (100)
+||||.+-|...+-.-.-.=|...||++
T Consensus 17 ~RLVP~~kG~R~Fs~iql~RL~kLGI~k 44 (71)
T 2eo2_A 17 NRLVPLVNGVREFSEIQLSRLKKLGIHK 44 (71)
T ss_dssp HHHSCCSSSSCCCCHHHHHHHHHHTCCC
T ss_pred HhhCCCCCCeeecCHHHHHHHHHcCCCC
Confidence 4688888876666555555566667664
No 29
>3r6u_A Choline-binding protein; substrate binding protein, ABC-transporter, extracellular, transport protein; 1.61A {Bacillus subtilis} SCOP: c.94.1.0 PDB: 3ppq_A 3ppo_A* 3ppp_A 3ppn_A 3ppr_A*
Probab=20.21 E-value=59 Score=24.14 Aligned_cols=28 Identities=4% Similarity=0.127 Sum_probs=24.5
Q ss_pred EeeCCCHHHHHHHHHHHHhhhhCceEec
Q psy5105 42 KFNFQNPDALRIFTTTVLRKDFGLNVEI 69 (100)
Q Consensus 42 ~iDF~~~~Av~~LtkaLL~~dfgL~~~l 69 (100)
+.+|+...++-++.+.+|.+.+|.++++
T Consensus 18 ~~~~te~~il~~i~~~~Le~~~G~~V~~ 45 (284)
T 3r6u_A 18 AQSMSESEIIASMLGQLIEHHTDLKTTT 45 (284)
T ss_dssp EESSHHHHHHHHHHHHHHHHHSSCCEEE
T ss_pred eCCCcHHHHHHHHHHHHHHhcCCCCeEE
Confidence 4579999999999999999988988765
Done!