BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5107
(74 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|328791162|ref|XP_001122631.2| PREDICTED: hypothetical protein LOC726914 [Apis mellifera]
Length = 558
Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats.
Identities = 43/50 (86%), Positives = 45/50 (90%)
Query: 4 YSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
YS TKKNNPNHIKRPMNAFMVWSQ+ERRKICE+QPDMHNAEISKRL
Sbjct: 15 YSDATQTKKNNPNHIKRPMNAFMVWSQIERRKICEIQPDMHNAEISKRLG 64
>gi|380025154|ref|XP_003696344.1| PREDICTED: uncharacterized protein LOC100871310 [Apis florea]
Length = 560
Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 43/50 (86%), Positives = 45/50 (90%)
Query: 4 YSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
YS TKKNNPNHIKRPMNAFMVWSQ+ERRKICE+QPDMHNAEISKRL
Sbjct: 30 YSDATQTKKNNPNHIKRPMNAFMVWSQIERRKICEIQPDMHNAEISKRLG 79
>gi|340713694|ref|XP_003395374.1| PREDICTED: hypothetical protein LOC100647727 [Bombus terrestris]
Length = 609
Score = 99.4 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 43/50 (86%), Positives = 45/50 (90%)
Query: 4 YSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
YS TKKNNPNHIKRPMNAFMVWSQ+ERRKICE+QPDMHNAEISKRL
Sbjct: 30 YSDATQTKKNNPNHIKRPMNAFMVWSQIERRKICEIQPDMHNAEISKRLG 79
>gi|383863867|ref|XP_003707401.1| PREDICTED: uncharacterized protein LOC100875283 [Megachile
rotundata]
Length = 477
Score = 99.4 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 43/50 (86%), Positives = 45/50 (90%)
Query: 4 YSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
YS TKKNNPNHIKRPMNAFMVWSQ+ERRKICE+QPDMHNAEISKRL
Sbjct: 15 YSDATQTKKNNPNHIKRPMNAFMVWSQIERRKICEIQPDMHNAEISKRLG 64
>gi|350417431|ref|XP_003491419.1| PREDICTED: hypothetical protein LOC100743868 [Bombus impatiens]
Length = 567
Score = 99.0 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 43/50 (86%), Positives = 45/50 (90%)
Query: 4 YSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
YS TKKNNPNHIKRPMNAFMVWSQ+ERRKICE+QPDMHNAEISKRL
Sbjct: 15 YSDATQTKKNNPNHIKRPMNAFMVWSQIERRKICEIQPDMHNAEISKRLG 64
>gi|270009646|gb|EFA06094.1| hypothetical protein TcasGA2_TC008936 [Tribolium castaneum]
Length = 306
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/50 (86%), Positives = 45/50 (90%)
Query: 4 YSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
YS TKKNNPNHIKRPMNAFMVWSQ+ERRKICEVQPDMHNAEISK+L
Sbjct: 30 YSDATQTKKNNPNHIKRPMNAFMVWSQIERRKICEVQPDMHNAEISKKLG 79
>gi|91086963|ref|XP_973116.1| PREDICTED: similar to Putative transcription factor SOX-14
[Tribolium castaneum]
Length = 312
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/50 (86%), Positives = 45/50 (90%)
Query: 4 YSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
YS TKKNNPNHIKRPMNAFMVWSQ+ERRKICEVQPDMHNAEISK+L
Sbjct: 36 YSDATQTKKNNPNHIKRPMNAFMVWSQIERRKICEVQPDMHNAEISKKLG 85
>gi|345495794|ref|XP_003427576.1| PREDICTED: hypothetical protein LOC100123293 [Nasonia
vitripennis]
Length = 450
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 42/50 (84%), Positives = 44/50 (88%)
Query: 4 YSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
YS TKKNNPNHIKRPMNAFMVWSQ+ERRKIC +QPDMHNAEISKRL
Sbjct: 30 YSDATQTKKNNPNHIKRPMNAFMVWSQIERRKICSIQPDMHNAEISKRLG 79
>gi|242009279|ref|XP_002425417.1| transcription factor Sox-2, putative [Pediculus humanus corporis]
gi|212509234|gb|EEB12679.1| transcription factor Sox-2, putative [Pediculus humanus corporis]
Length = 455
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 41/45 (91%), Positives = 43/45 (95%)
Query: 9 ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
TKK+NPNHIKRPMNAFMVWSQ+ERRKICEVQPDMHNAEISKRL
Sbjct: 5 GTKKHNPNHIKRPMNAFMVWSQIERRKICEVQPDMHNAEISKRLG 49
>gi|328717332|ref|XP_003246175.1| PREDICTED: hypothetical protein LOC100571300 [Acyrthosiphon
pisum]
Length = 503
Score = 90.9 bits (224), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 41/51 (80%), Positives = 43/51 (84%)
Query: 4 YSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLAL 54
YS TKKNNPNHIKRPMNAFMVWSQ+ERRKIC QPDMHNAEISK L +
Sbjct: 36 YSDATQTKKNNPNHIKRPMNAFMVWSQLERRKICNDQPDMHNAEISKMLGV 86
>gi|321479258|gb|EFX90214.1| hypothetical protein DAPPUDRAFT_39527 [Daphnia pulex]
Length = 84
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/43 (93%), Positives = 42/43 (97%)
Query: 11 KKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
KKNNPNHIKRPMNAFMVWSQ+ERRKICE+QPDMHNAEISKRL
Sbjct: 1 KKNNPNHIKRPMNAFMVWSQIERRKICEIQPDMHNAEISKRLG 43
>gi|322801400|gb|EFZ22061.1| hypothetical protein SINV_03283 [Solenopsis invicta]
Length = 412
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/44 (84%), Positives = 41/44 (93%)
Query: 10 TKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
TKKN+PN +KRPMNAFMVWSQM+RR+ICEVQPDMHNAEISK L
Sbjct: 17 TKKNSPNRVKRPMNAFMVWSQMQRRQICEVQPDMHNAEISKTLG 60
>gi|194754347|ref|XP_001959457.1| GF12887 [Drosophila ananassae]
gi|190620755|gb|EDV36279.1| GF12887 [Drosophila ananassae]
Length = 561
Score = 85.5 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 38/50 (76%), Positives = 41/50 (82%)
Query: 4 YSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
YS TKK++P HIKRPMNAFMVWSQMERRKICE PD+HNAEISK L
Sbjct: 39 YSDATRTKKHSPGHIKRPMNAFMVWSQMERRKICERTPDLHNAEISKELG 88
>gi|17136768|ref|NP_476894.1| Sox box protein 14, isoform A [Drosophila melanogaster]
gi|19549768|ref|NP_599117.1| Sox box protein 14, isoform B [Drosophila melanogaster]
gi|108935907|sp|P40656.3|SOX14_DROME RecName: Full=Putative transcription factor SOX-14
gi|10727074|gb|AAF47126.2| Sox box protein 14, isoform B [Drosophila melanogaster]
gi|21626694|gb|AAM68286.1| Sox box protein 14, isoform A [Drosophila melanogaster]
Length = 669
Score = 85.1 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 38/50 (76%), Positives = 41/50 (82%)
Query: 4 YSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
YS TKK++P HIKRPMNAFMVWSQMERRKICE PD+HNAEISK L
Sbjct: 173 YSDATRTKKHSPGHIKRPMNAFMVWSQMERRKICERTPDLHNAEISKELG 222
>gi|194885938|ref|XP_001976516.1| GG22917 [Drosophila erecta]
gi|190659703|gb|EDV56916.1| GG22917 [Drosophila erecta]
Length = 668
Score = 85.1 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 38/50 (76%), Positives = 41/50 (82%)
Query: 4 YSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
YS TKK++P HIKRPMNAFMVWSQMERRKICE PD+HNAEISK L
Sbjct: 178 YSDATRTKKHSPGHIKRPMNAFMVWSQMERRKICERTPDLHNAEISKELG 227
>gi|195151237|ref|XP_002016554.1| GL11646 [Drosophila persimilis]
gi|194110401|gb|EDW32444.1| GL11646 [Drosophila persimilis]
Length = 648
Score = 85.1 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 38/50 (76%), Positives = 41/50 (82%)
Query: 4 YSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
YS TKK++P HIKRPMNAFMVWSQMERRKICE PD+HNAEISK L
Sbjct: 141 YSDATQTKKHSPGHIKRPMNAFMVWSQMERRKICERTPDLHNAEISKELG 190
>gi|195489426|ref|XP_002092734.1| GE14354 [Drosophila yakuba]
gi|194178835|gb|EDW92446.1| GE14354 [Drosophila yakuba]
Length = 685
Score = 85.1 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 38/50 (76%), Positives = 41/50 (82%)
Query: 4 YSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
YS TKK++P HIKRPMNAFMVWSQMERRKICE PD+HNAEISK L
Sbjct: 188 YSDATRTKKHSPGHIKRPMNAFMVWSQMERRKICERTPDLHNAEISKELG 237
>gi|170057642|ref|XP_001864573.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167877035|gb|EDS40418.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 513
Score = 85.1 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 37/51 (72%), Positives = 41/51 (80%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
L S + TKK++P HIKRPMN FMVWSQ+ERRKICEV PDMHNA ISK L
Sbjct: 9 LTSTLSLTKKHSPGHIKRPMNPFMVWSQIERRKICEVTPDMHNAVISKNLG 59
>gi|198458007|ref|XP_001360869.2| GA15918 [Drosophila pseudoobscura pseudoobscura]
gi|198136187|gb|EAL25444.2| GA15918 [Drosophila pseudoobscura pseudoobscura]
Length = 545
Score = 84.7 bits (208), Expect = 7e-15, Method: Composition-based stats.
Identities = 38/50 (76%), Positives = 41/50 (82%)
Query: 4 YSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
YS TKK++P HIKRPMNAFMVWSQMERRKICE PD+HNAEISK L
Sbjct: 38 YSDATQTKKHSPGHIKRPMNAFMVWSQMERRKICERTPDLHNAEISKELG 87
>gi|195382569|ref|XP_002050002.1| GJ21897 [Drosophila virilis]
gi|194144799|gb|EDW61195.1| GJ21897 [Drosophila virilis]
Length = 489
Score = 84.7 bits (208), Expect = 7e-15, Method: Composition-based stats.
Identities = 38/50 (76%), Positives = 41/50 (82%)
Query: 4 YSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
YS TKK++P HIKRPMNAFMVWSQMERRKICE PD+HNAEISK L
Sbjct: 28 YSDATQTKKHSPGHIKRPMNAFMVWSQMERRKICEKTPDLHNAEISKELG 77
>gi|195347307|ref|XP_002040195.1| GM16076 [Drosophila sechellia]
gi|194135544|gb|EDW57060.1| GM16076 [Drosophila sechellia]
Length = 337
Score = 84.7 bits (208), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 38/50 (76%), Positives = 41/50 (82%)
Query: 4 YSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
YS TKK++P HIKRPMNAFMVWSQMERRKICE PD+HNAEISK L
Sbjct: 175 YSDATRTKKHSPGHIKRPMNAFMVWSQMERRKICERTPDLHNAEISKELG 224
>gi|307193574|gb|EFN76312.1| Putative transcription factor SOX-14 [Harpegnathos saltator]
Length = 509
Score = 84.3 bits (207), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 36/38 (94%), Positives = 37/38 (97%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
NHIKRPMNAFMVWSQ+ERRKICEVQPDMHNAEISKRL
Sbjct: 1 NHIKRPMNAFMVWSQIERRKICEVQPDMHNAEISKRLG 38
>gi|222160395|gb|ACM47362.1| Sox14 protein [Scylla paramamosain]
Length = 427
Score = 84.0 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 37/50 (74%), Positives = 42/50 (84%)
Query: 4 YSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
YS TKK+NPNH+KRPMNAFMVWSQMERR+I + PDMHNAEISK+L
Sbjct: 34 YSDATQTKKHNPNHVKRPMNAFMVWSQMERREIVKFAPDMHNAEISKQLG 83
>gi|402589796|gb|EJW83727.1| HMG box family protein [Wuchereria bancrofti]
Length = 274
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/43 (86%), Positives = 38/43 (88%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLAL 54
K + NHIKRPMNAFMVWSQMERRKICE PDMHNAEISKRL L
Sbjct: 86 KKSSNHIKRPMNAFMVWSQMERRKICETSPDMHNAEISKRLGL 128
>gi|6634125|emb|CAB64387.1| Sox14 protein [Drosophila melanogaster]
Length = 470
Score = 83.6 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 38/50 (76%), Positives = 41/50 (82%)
Query: 4 YSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
YS TKK++P HIKRPMNAFMVWSQMERRKICE PD+HNAEISK L
Sbjct: 171 YSDATRTKKHSPGHIKRPMNAFMVWSQMERRKICERTPDLHNAEISKELG 220
>gi|195425604|ref|XP_002061086.1| GK10637 [Drosophila willistoni]
gi|194157171|gb|EDW72072.1| GK10637 [Drosophila willistoni]
Length = 539
Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 37/50 (74%), Positives = 40/50 (80%)
Query: 4 YSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
YS TKK++P HIKRPMN FMVWSQMERRKICE PD+HNAEISK L
Sbjct: 29 YSDATQTKKHSPGHIKRPMNPFMVWSQMERRKICERTPDLHNAEISKELG 78
>gi|312070764|ref|XP_003138297.1| HMG box family protein [Loa loa]
gi|307766542|gb|EFO25776.1| HMG box family protein [Loa loa]
Length = 526
Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 37/43 (86%), Positives = 38/43 (88%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLAL 54
K + NHIKRPMNAFMVWSQMERRKICE PDMHNAEISKRL L
Sbjct: 97 KKSSNHIKRPMNAFMVWSQMERRKICETSPDMHNAEISKRLGL 139
>gi|195122680|ref|XP_002005839.1| GI20689 [Drosophila mojavensis]
gi|193910907|gb|EDW09774.1| GI20689 [Drosophila mojavensis]
Length = 442
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 36/44 (81%), Positives = 39/44 (88%)
Query: 10 TKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
TKK++P HIKRPMNAFMVWSQMERRKICE PD+HNAEISK L
Sbjct: 1 TKKHSPGHIKRPMNAFMVWSQMERRKICEKTPDLHNAEISKELG 44
>gi|170593221|ref|XP_001901363.1| HMG box family protein [Brugia malayi]
gi|158591430|gb|EDP30043.1| HMG box family protein [Brugia malayi]
Length = 498
Score = 81.6 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 36/43 (83%), Positives = 38/43 (88%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLAL 54
+ + NHIKRPMNAFMVWSQMERRKICE PDMHNAEISKRL L
Sbjct: 75 EKSSNHIKRPMNAFMVWSQMERRKICETSPDMHNAEISKRLGL 117
>gi|241811172|ref|XP_002416447.1| HMG-box transcription factor, putative [Ixodes scapularis]
gi|215510911|gb|EEC20364.1| HMG-box transcription factor, putative [Ixodes scapularis]
Length = 393
Score = 80.9 bits (198), Expect = 8e-14, Method: Composition-based stats.
Identities = 37/43 (86%), Positives = 38/43 (88%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLAL 54
K NHIKRPMNAFMVWSQ+ERRKICE QPDMHNAEISKRL L
Sbjct: 42 KKVTNHIKRPMNAFMVWSQIERRKICEQQPDMHNAEISKRLGL 84
>gi|427784255|gb|JAA57579.1| Putative hmg-box transcription factor [Rhipicephalus pulchellus]
Length = 412
Score = 80.9 bits (198), Expect = 8e-14, Method: Composition-based stats.
Identities = 36/43 (83%), Positives = 38/43 (88%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLAL 54
K NHIKRPMNAFMVWSQ+ERRKICE QPDMHNAEISKRL +
Sbjct: 46 KKVTNHIKRPMNAFMVWSQIERRKICEQQPDMHNAEISKRLGM 88
>gi|7496843|pir||T25591 hypothetical protein C32E12.3 - Caenorhabditis elegans
Length = 1070
Score = 80.9 bits (198), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 36/42 (85%), Positives = 38/42 (90%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K + NHIKRPMNAFMVWSQMERRKICE QPDMHNAEISK+L
Sbjct: 87 KKSSNHIKRPMNAFMVWSQMERRKICEHQPDMHNAEISKQLG 128
>gi|308505812|ref|XP_003115089.1| CRE-SEM-2 protein [Caenorhabditis remanei]
gi|308259271|gb|EFP03224.1| CRE-SEM-2 protein [Caenorhabditis remanei]
Length = 407
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/42 (85%), Positives = 38/42 (90%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K + NHIKRPMNAFMVWSQMERRKICE QPDMHNAEISK+L
Sbjct: 85 KKSSNHIKRPMNAFMVWSQMERRKICEHQPDMHNAEISKQLG 126
>gi|321464162|gb|EFX75172.1| hypothetical protein DAPPUDRAFT_199562 [Daphnia pulex]
Length = 177
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/50 (74%), Positives = 41/50 (82%)
Query: 4 YSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
YS TKK N IKRPMNAFMVWSQ+ERRKICE+QP+MHNAEISK+L
Sbjct: 39 YSDATQTKKKNTVRIKRPMNAFMVWSQIERRKICEIQPEMHNAEISKQLG 88
>gi|25151035|ref|NP_740846.1| Protein SEM-2 [Caenorhabditis elegans]
gi|376372936|emb|CCD61581.1| Protein SEM-2 [Caenorhabditis elegans]
Length = 404
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/42 (85%), Positives = 38/42 (90%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K + NHIKRPMNAFMVWSQMERRKICE QPDMHNAEISK+L
Sbjct: 87 KKSSNHIKRPMNAFMVWSQMERRKICEHQPDMHNAEISKQLG 128
>gi|341882405|gb|EGT38340.1| hypothetical protein CAEBREN_12314 [Caenorhabditis brenneri]
Length = 414
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/42 (85%), Positives = 38/42 (90%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K + NHIKRPMNAFMVWSQMERRKICE QPDMHNAEISK+L
Sbjct: 83 KKSSNHIKRPMNAFMVWSQMERRKICEHQPDMHNAEISKQLG 124
>gi|341904605|gb|EGT60438.1| hypothetical protein CAEBREN_23998 [Caenorhabditis brenneri]
Length = 429
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/42 (85%), Positives = 38/42 (90%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K + NHIKRPMNAFMVWSQMERRKICE QPDMHNAEISK+L
Sbjct: 83 KKSSNHIKRPMNAFMVWSQMERRKICEHQPDMHNAEISKQLG 124
>gi|324506291|gb|ADY42690.1| Transcription factor SOX-14 [Ascaris suum]
Length = 500
Score = 80.1 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 35/42 (83%), Positives = 38/42 (90%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K + NHIKRPMNAFMVWSQ+ERRKICE QPDMHNAEISK+L
Sbjct: 100 KKSSNHIKRPMNAFMVWSQLERRKICEHQPDMHNAEISKQLG 141
>gi|268568630|ref|XP_002640305.1| C. briggsae CBR-SOX-1 protein [Caenorhabditis briggsae]
Length = 401
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/42 (85%), Positives = 38/42 (90%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K + NHIKRPMNAFMVWSQMERRKICE QPDMHNAEISK+L
Sbjct: 81 KKSSNHIKRPMNAFMVWSQMERRKICEHQPDMHNAEISKQLG 122
>gi|157130629|ref|XP_001655745.1| hypothetical protein AaeL_AAEL011831 [Aedes aegypti]
gi|108871822|gb|EAT36047.1| AAEL011831-PA [Aedes aegypti]
Length = 556
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/44 (79%), Positives = 38/44 (86%)
Query: 10 TKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
TKK++P HIKRPMN FMVWSQ+ERRKICEV PDMHNA ISK L
Sbjct: 128 TKKHSPGHIKRPMNPFMVWSQIERRKICEVTPDMHNAVISKNLG 171
>gi|170057644|ref|XP_001864574.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167877036|gb|EDS40419.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 125
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/44 (79%), Positives = 38/44 (86%)
Query: 10 TKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
TKK++P HIKRPMN FMVWSQ+ERRKICEV PDMHNA ISK L
Sbjct: 77 TKKHSPGHIKRPMNPFMVWSQIERRKICEVTPDMHNAVISKNLG 120
>gi|229001910|emb|CAY12635.1| SRY-related HMG box C protein [Platynereis dumerilii]
Length = 250
Score = 78.2 bits (191), Expect = 6e-13, Method: Composition-based stats.
Identities = 38/46 (82%), Positives = 40/46 (86%), Gaps = 1/46 (2%)
Query: 9 ATK-KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
ATK K NHIKRPMNAFMVWSQ+ERRKI E+QPDMHNAEISKRL
Sbjct: 40 ATKCKKMANHIKRPMNAFMVWSQIERRKISEIQPDMHNAEISKRLG 85
>gi|405964900|gb|EKC30339.1| Putative transcription factor SOX-14 [Crassostrea gigas]
Length = 339
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/42 (80%), Positives = 36/42 (85%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K NH+KRPMNAFMVWSQ+ERRKI EV PDMHNAEISKRL
Sbjct: 29 KKQSNHVKRPMNAFMVWSQLERRKISEVSPDMHNAEISKRLG 70
>gi|443697840|gb|ELT98138.1| hypothetical protein CAPTEDRAFT_128551, partial [Capitella
teleta]
Length = 115
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/37 (86%), Positives = 35/37 (94%)
Query: 17 HIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
H+KRPMNAFMVWSQ+ERRKI E+QPDMHNAEISKRL
Sbjct: 40 HVKRPMNAFMVWSQIERRKISEIQPDMHNAEISKRLG 76
>gi|291235047|ref|XP_002737457.1| PREDICTED: sox11-like protein-like [Saccoglossus kowalevskii]
Length = 296
Score = 75.1 bits (183), Expect = 6e-12, Method: Composition-based stats.
Identities = 33/42 (78%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWSQ+ERRKI E PDMHNAEISKRL
Sbjct: 55 KATNGHIKRPMNAFMVWSQIERRKISEHHPDMHNAEISKRLG 96
>gi|72164888|ref|XP_798084.1| PREDICTED: transcription factor Sox-11-B-like [Strongylocentrotus
purpuratus]
Length = 367
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/42 (78%), Positives = 35/42 (83%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K N HIKRPMNAFMVWSQ+ERR+I E PDMHNAEISKRL
Sbjct: 52 KGNNGHIKRPMNAFMVWSQIERRRIMETTPDMHNAEISKRLG 93
>gi|390461208|ref|XP_003732629.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor SOX-4
[Callithrix jacchus]
Length = 472
Score = 74.7 bits (182), Expect = 7e-12, Method: Composition-based stats.
Identities = 33/42 (78%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWSQ+ERRKI E PDMHNAEISKRL
Sbjct: 53 KTPSGHIKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLG 94
>gi|403310686|ref|NP_001258134.1| transcription factor SOX-4 [Rattus norvegicus]
Length = 440
Score = 74.3 bits (181), Expect = 8e-12, Method: Composition-based stats.
Identities = 33/42 (78%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWSQ+ERRKI E PDMHNAEISKRL
Sbjct: 53 KTPSGHIKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLG 94
>gi|296697|emb|CAA49779.1| sox-4 [Mus musculus]
Length = 440
Score = 74.3 bits (181), Expect = 8e-12, Method: Composition-based stats.
Identities = 33/42 (78%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWSQ+ERRKI E PDMHNAEISKRL
Sbjct: 53 KTPSGHIKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLG 94
>gi|56118239|ref|NP_033264.2| transcription factor SOX-4 [Mus musculus]
gi|341942057|sp|Q06831.2|SOX4_MOUSE RecName: Full=Transcription factor SOX-4
gi|56078602|gb|AAH52736.1| SRY-box containing gene 4 [Mus musculus]
gi|148700459|gb|EDL32406.1| SRY-box containing gene 4 [Mus musculus]
Length = 440
Score = 74.3 bits (181), Expect = 9e-12, Method: Composition-based stats.
Identities = 33/42 (78%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWSQ+ERRKI E PDMHNAEISKRL
Sbjct: 53 KTPSGHIKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLG 94
>gi|311259793|ref|XP_003128248.1| PREDICTED: transcription factor SOX-4-like [Sus scrofa]
Length = 477
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/42 (78%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWSQ+ERRKI E PDMHNAEISKRL
Sbjct: 53 KTPSGHIKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLG 94
>gi|118151326|ref|NP_001071596.1| transcription factor SOX-4 [Bos taurus]
gi|111307096|gb|AAI20192.1| SRY (sex determining region Y)-box 4 [Bos taurus]
Length = 481
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/42 (78%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWSQ+ERRKI E PDMHNAEISKRL
Sbjct: 53 KTPSGHIKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLG 94
>gi|296474047|tpg|DAA16162.1| TPA: SRY (sex determining region Y)-box 4 [Bos taurus]
Length = 378
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/42 (78%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWSQ+ERRKI E PDMHNAEISKRL
Sbjct: 53 KTPSGHIKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLG 94
>gi|206583368|gb|ACI15223.1| SoxC [Branchiostoma belcheri]
Length = 388
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 36/52 (69%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Query: 2 GLYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
G SP ++ K HIKRPMNAFMVWSQ+ERRKI E PDMHNAEISKRL
Sbjct: 95 GATSP-KSKKSCRDGHIKRPMNAFMVWSQIERRKISEQAPDMHNAEISKRLG 145
>gi|426351724|ref|XP_004065411.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor SOX-4
[Gorilla gorilla gorilla]
Length = 472
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/42 (78%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWSQ+ERRKI E PDMHNAEISKRL
Sbjct: 53 KTPSGHIKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLG 94
>gi|87133392|gb|ABD24303.1| Sry-like protein C [Branchiostoma belcheri]
Length = 388
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 36/52 (69%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Query: 2 GLYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
G SP ++ K HIKRPMNAFMVWSQ+ERRKI E PDMHNAEISKRL
Sbjct: 95 GATSP-KSKKSCRDGHIKRPMNAFMVWSQIERRKISEQAPDMHNAEISKRLG 145
>gi|51571953|ref|NP_998287.1| SRY-box containing gene 4a [Danio rerio]
gi|34452016|gb|AAQ72474.1| Sox4a [Danio rerio]
gi|68085022|gb|AAH56564.2| SRY-box containing gene 4a [Danio rerio]
gi|68085409|gb|AAH65354.2| SRY-box containing gene 4a [Danio rerio]
Length = 363
Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/42 (78%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWSQ+ERRKI E PDMHNAEISKRL
Sbjct: 58 KTPSGHIKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLG 99
>gi|441621995|ref|XP_003263605.2| PREDICTED: transcription factor SOX-4 [Nomascus leucogenys]
Length = 453
Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/42 (78%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWSQ+ERRKI E PDMHNAEISKRL
Sbjct: 53 KTPSGHIKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLG 94
>gi|47220774|emb|CAF99981.1| unnamed protein product [Tetraodon nigroviridis]
Length = 369
Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/42 (78%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWSQ+ERRKI E PDMHNAEISKRL
Sbjct: 61 KTPSGHIKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLG 102
>gi|402865948|ref|XP_003897162.1| PREDICTED: transcription factor SOX-4 [Papio anubis]
Length = 415
Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/42 (78%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWSQ+ERRKI E PDMHNAEISKRL
Sbjct: 53 KTPSGHIKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLG 94
>gi|32307211|gb|AAP79094.1| SRY-box containing protein 4 [Gallus gallus]
Length = 428
Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/42 (78%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWSQ+ERRKI E PDMHNAEISKRL
Sbjct: 53 KTPSGHIKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLG 94
>gi|50874150|emb|CAE18168.1| sox4 protein [Danio rerio]
Length = 357
Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/42 (78%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWSQ+ERRKI E PDMHNAEISKRL
Sbjct: 52 KTPSGHIKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLG 93
>gi|395830539|ref|XP_003788380.1| PREDICTED: transcription factor SOX-4 [Otolemur garnettii]
Length = 476
Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/42 (78%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWSQ+ERRKI E PDMHNAEISKRL
Sbjct: 53 KTPSGHIKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLG 94
>gi|291190428|ref|NP_001167115.1| Transcription factor SOX-4 [Salmo salar]
gi|223648218|gb|ACN10867.1| Transcription factor SOX-4 [Salmo salar]
Length = 376
Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/42 (78%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWSQ+ERRKI E PDMHNAEISKRL
Sbjct: 53 KTPTGHIKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLG 94
>gi|4507163|ref|NP_003098.1| transcription factor SOX-4 [Homo sapiens]
gi|55626020|ref|XP_527244.1| PREDICTED: transcription factor SOX-4 [Pan troglodytes]
gi|548952|sp|Q06945.1|SOX4_HUMAN RecName: Full=Transcription factor SOX-4
gi|36553|emb|CAA50018.1| SOX-4 protein [Homo sapiens]
gi|49257399|gb|AAH72668.1| SOX4 protein [Homo sapiens]
gi|119575833|gb|EAW55429.1| SRY (sex determining region Y)-box 4 [Homo sapiens]
gi|167773499|gb|ABZ92184.1| SRY (sex determining region Y)-box 4 [synthetic construct]
Length = 474
Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/42 (78%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWSQ+ERRKI E PDMHNAEISKRL
Sbjct: 53 KTPSGHIKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLG 94
>gi|109069753|ref|XP_001098923.1| PREDICTED: transcription factor SOX-4 [Macaca mulatta]
Length = 475
Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/42 (78%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWSQ+ERRKI E PDMHNAEISKRL
Sbjct: 53 KTPSGHIKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLG 94
>gi|26343789|dbj|BAC35551.1| unnamed protein product [Mus musculus]
Length = 307
Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/42 (78%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWSQ+ERRKI E PDMHNAEISKRL
Sbjct: 53 KTPSGHIKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLG 94
>gi|395511901|ref|XP_003760189.1| PREDICTED: transcription factor SOX-4 [Sarcophilus harrisii]
Length = 360
Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/42 (78%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWSQ+ERRKI E PDMHNAEISKRL
Sbjct: 53 KTPSGHIKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLG 94
>gi|259013207|ref|NP_001158353.1| SRY-box containing gene 4 [Oryzias latipes]
gi|227336634|gb|ACP21264.1| SRY-box containing gene 4 [Oryzias latipes]
Length = 325
Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/42 (78%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWSQ+ERRKI E PDMHNAEISKRL
Sbjct: 58 KTPSGHIKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLG 99
>gi|156359781|ref|XP_001624943.1| predicted protein [Nematostella vectensis]
gi|156211751|gb|EDO32843.1| predicted protein [Nematostella vectensis]
Length = 90
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/45 (71%), Positives = 38/45 (84%)
Query: 9 ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+ KK++ H+KRPMNAFMVWSQ+ERRK+ E PDMHNAEISKRL
Sbjct: 14 SKKKSDMQHVKRPMNAFMVWSQIERRKMAEEHPDMHNAEISKRLG 58
>gi|126321950|ref|XP_001366861.1| PREDICTED: transcription factor SOX-4-like [Monodelphis
domestica]
Length = 501
Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/42 (78%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWSQ+ERRKI E PDMHNAEISKRL
Sbjct: 53 KTPSGHIKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLG 94
>gi|348512577|ref|XP_003443819.1| PREDICTED: transcription factor Sox-11-A-like [Oreochromis
niloticus]
Length = 371
Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/42 (78%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWSQ+ERRKI E PDMHNAEISKRL
Sbjct: 51 KTPTGHIKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLG 92
>gi|47229514|emb|CAF99502.1| unnamed protein product [Tetraodon nigroviridis]
Length = 371
Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/42 (78%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWSQ+ERRKI E PDMHNAEISKRL
Sbjct: 51 KTPTGHIKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLG 92
>gi|41053828|ref|NP_957195.1| SRY-box containing gene 4b [Danio rerio]
gi|40352712|gb|AAH64664.1| SRY-box containing gene 4b [Danio rerio]
Length = 342
Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/42 (78%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWSQ+ERRKI E PDMHNAEISKRL
Sbjct: 49 KTASGHIKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLG 90
>gi|148225043|ref|NP_001090179.1| SRY (sex determining region Y)-box 4 [Xenopus laevis]
gi|78675505|dbj|BAE47508.1| transcription factor Sox4-2 [Xenopus laevis]
Length = 377
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/42 (78%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWSQ+ERRKI E PDMHNAEISKRL
Sbjct: 54 KTPSGHIKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLG 95
>gi|49119365|gb|AAH73494.1| Sox4-1 protein [Xenopus laevis]
gi|213623750|gb|AAI70173.1| Transcription factor Sox4-2 [Xenopus laevis]
Length = 377
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/42 (78%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWSQ+ERRKI E PDMHNAEISKRL
Sbjct: 54 KTPSGHIKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLG 95
>gi|288557294|ref|NP_001165672.1| transcription factor Sox4 [Xenopus laevis]
gi|10441411|gb|AAG17026.1|AF186844_1 transcription factor Sox4 [Xenopus laevis]
Length = 379
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/42 (78%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWSQ+ERRKI E PDMHNAEISKRL
Sbjct: 54 KTPSGHIKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLG 95
>gi|260829439|ref|XP_002609669.1| hypothetical protein BRAFLDRAFT_123578 [Branchiostoma floridae]
gi|229295031|gb|EEN65679.1| hypothetical protein BRAFLDRAFT_123578 [Branchiostoma floridae]
Length = 389
Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/46 (71%), Positives = 36/46 (78%)
Query: 8 RATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
++ K HIKRPMNAFMVWSQ+ERRKI E PDMHNAEISKRL
Sbjct: 101 KSKKSCRDGHIKRPMNAFMVWSQIERRKISEQAPDMHNAEISKRLG 146
>gi|34452018|gb|AAQ72475.1| Sox4b [Danio rerio]
Length = 342
Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/42 (78%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWSQ+ERRKI E PDMHNAEISKRL
Sbjct: 49 KTASGHIKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLG 90
>gi|148539610|ref|NP_001091911.1| transcription factor Sox4-1 [Xenopus laevis]
gi|78675503|dbj|BAE47507.1| transcription factor Sox4-1 [Xenopus laevis]
Length = 377
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/42 (78%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWSQ+ERRKI E PDMHNAEISKRL
Sbjct: 54 KTPSGHIKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLG 95
>gi|410911144|ref|XP_003969050.1| PREDICTED: transcription factor Sox-11-A-like [Takifugu rubripes]
gi|33415928|gb|AAQ18501.1| transcription factor Sox4 [Takifugu rubripes]
Length = 371
Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/42 (78%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWSQ+ERRKI E PDMHNAEISKRL
Sbjct: 51 KTPTGHIKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLG 92
>gi|113931280|ref|NP_001039084.1| SRY (sex determining region Y)-box 4 [Xenopus (Silurana)
tropicalis]
gi|89268172|emb|CAJ81355.1| SRY (sex determining region Y)-box 4 [Xenopus (Silurana)
tropicalis]
gi|116284297|gb|AAI23925.1| SRY (sex determining region Y)-box 4 [Xenopus (Silurana)
tropicalis]
gi|134025983|gb|AAI35264.1| SRY (sex determining region Y)-box 4 [Xenopus (Silurana)
tropicalis]
Length = 387
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/42 (78%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWSQ+ERRKI E PDMHNAEISKRL
Sbjct: 54 KTPSGHIKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLG 95
>gi|410905121|ref|XP_003966040.1| PREDICTED: transcription factor SOX-4-like [Takifugu rubripes]
gi|33415932|gb|AAQ18503.1| transcription factor Sox12 [Takifugu rubripes]
Length = 408
Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/42 (78%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWSQ+ERRKI E PDMHNAEISKRL
Sbjct: 61 KTPSGHIKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLG 102
>gi|348512336|ref|XP_003443699.1| PREDICTED: transcription factor SOX-4-like [Oreochromis niloticus]
Length = 414
Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/42 (78%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWSQ+ERRKI E PDMHNAEISKRL
Sbjct: 61 KTPSGHIKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLG 102
>gi|51599121|gb|AAU08211.1| transcription factor Sox4a [Acipenser schrenckii]
Length = 362
Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/42 (78%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWSQ+ERRKI E PDMHNAEISKRL
Sbjct: 38 KTPSGHIKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLG 79
>gi|148233868|ref|NP_001079998.1| SRY (sex determining region Y)-box 4 [Xenopus laevis]
gi|37589354|gb|AAH59296.1| MGC68880 protein [Xenopus laevis]
Length = 387
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/42 (78%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWSQ+ERRKI E PDMHNAEISKRL
Sbjct: 54 KTPSGHIKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLG 95
>gi|380793441|gb|AFE68596.1| transcription factor SOX-4, partial [Macaca mulatta]
Length = 160
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/42 (78%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWSQ+ERRKI E PDMHNAEISKRL
Sbjct: 53 KTPSGHIKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLG 94
>gi|213625249|gb|AAI70171.1| Transcription factor Sox4-2 [Xenopus laevis]
Length = 377
Score = 72.8 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 33/42 (78%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWSQ+ERRKI E PDMHNAEISKRL
Sbjct: 54 KTPSGHIKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLG 95
>gi|345796749|ref|XP_003434219.1| PREDICTED: transcription factor SOX-4 [Canis lupus familiaris]
Length = 364
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/42 (78%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWSQ+ERRKI E PDMHNAEISKRL
Sbjct: 53 KTPSGHIKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLG 94
>gi|168279099|dbj|BAG11429.1| transcription factor SOX-4 [synthetic construct]
Length = 433
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/42 (78%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWSQ+ERRKI E PDMHNAEISKRL
Sbjct: 53 KTPSGHIKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLG 94
>gi|397505442|ref|XP_003823271.1| PREDICTED: transcription factor SOX-4 [Pan paniscus]
Length = 277
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/42 (78%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWSQ+ERRKI E PDMHNAEISKRL
Sbjct: 53 KTPSGHIKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLG 94
>gi|126572546|gb|ABO21643.1| HMG-box Sox4 [Carassius auratus]
gi|166218487|gb|ABY85283.1| HMG-box sox protein 4 [diploid improved black crucian carp]
gi|187403578|gb|ACD03684.1| Sox4 [tetraploid red crucian carp x Megalobrama amblycephala]
gi|187403585|gb|ACD03687.1| Sox4 [triploid red crucian carp x Megalobrama amblycephala]
gi|194295602|gb|ACF40830.1| Sox4 [triploid hybrids of tetraploid male x Carassius cuvieri]
gi|194323106|gb|ACF49009.1| transcription factor Sox4 [Carassius carassius red var x Cyprinus
carpio]
gi|237507259|gb|ACQ99335.1| HMG-box transcription factor Sox4 [Carassius carassius red var x
Cyprinus carpio]
gi|237507265|gb|ACQ99338.1| HMG-box transcription factor Sox9 [Carassius carassius red var x
Cyprinus carpio]
gi|340523188|gb|AEK48081.1| transcription factor SOX4 [Carassius auratus ssp. 'Pengze']
Length = 123
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/42 (78%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWSQ+ERRKI E PDMHNAEISKRL
Sbjct: 46 KTPSGHIKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLG 87
>gi|283855791|gb|ADB45219.1| SOX4 HMG-box protein [Carassius auratus auratus]
gi|283855793|gb|ADB45220.1| SOX4 HMG-box protein [Carassius auratus auratus]
Length = 123
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/42 (78%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWSQ+ERRKI E PDMHNAEISKRL
Sbjct: 46 KTPSGHIKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLG 87
>gi|348566236|ref|XP_003468908.1| PREDICTED: transcription factor SOX-4-like [Cavia porcellus]
Length = 221
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/42 (78%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWSQ+ERRKI E PDMHNAEISKRL
Sbjct: 53 KTPSGHIKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLG 94
>gi|51599123|gb|AAU08212.1| transcription factor Sox4b [Acipenser schrenckii]
Length = 372
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 33/42 (78%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWSQ+ERRKI E PDMHNAEISKRL
Sbjct: 48 KTPSGHIKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLG 89
>gi|148763342|gb|ABR10399.1| SOX11b [Epinephelus coioides]
Length = 389
Score = 72.4 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 32/42 (76%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWS++ERRKI E PDMHNAEISKRL
Sbjct: 44 KTASGHIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLG 85
>gi|281343676|gb|EFB19260.1| hypothetical protein PANDA_015607 [Ailuropoda melanoleuca]
Length = 262
Score = 72.4 bits (176), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/42 (78%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWSQ+ERRKI E PDMHNAEISKRL
Sbjct: 53 KTPSGHIKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLG 94
>gi|283855789|gb|ADB45218.1| SOX4 HMG-box protein [Carassius auratus auratus]
Length = 123
Score = 72.4 bits (176), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/42 (78%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWSQ+ERRKI E PDMHNAEISKRL
Sbjct: 46 KTPSGHIKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLG 87
>gi|297677251|ref|XP_002816518.1| PREDICTED: transcription factor SOX-4 [Pongo abelii]
Length = 332
Score = 72.4 bits (176), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/42 (78%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWSQ+ERRKI E PDMHNAEISKRL
Sbjct: 53 KTPSGHIKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLG 94
>gi|301781198|ref|XP_002926016.1| PREDICTED: transcription factor SOX-4-like [Ailuropoda
melanoleuca]
Length = 255
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/42 (78%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWSQ+ERRKI E PDMHNAEISKRL
Sbjct: 53 KTPSGHIKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLG 94
>gi|92096385|gb|AAI15165.1| Sox11a protein [Danio rerio]
gi|197246979|gb|AAI64369.1| Sox11a protein [Danio rerio]
Length = 336
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWS++ERRKI E PDMHNAEISKRL
Sbjct: 35 KTATGHIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLG 76
>gi|431913257|gb|ELK14935.1| Transcription factor SOX-4 [Pteropus alecto]
Length = 247
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/42 (78%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWSQ+ERRKI E PDMHNAEISKRL
Sbjct: 53 KTPSGHIKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLG 94
>gi|26324948|dbj|BAC26228.1| unnamed protein product [Mus musculus]
Length = 286
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 33/42 (78%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWSQ+ERRKI E PDMHNAEISKRL
Sbjct: 53 KTPSGHIKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLG 94
>gi|426251354|ref|XP_004019388.1| PREDICTED: transcription factor SOX-4 [Ovis aries]
Length = 246
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/38 (84%), Positives = 33/38 (86%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
HIKRPMNAFMVWSQ+ERRKI E PDMHNAEISKRL
Sbjct: 57 GHIKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLG 94
>gi|4099263|gb|AAD00561.1| transcriptional regulator Sox-11A [Danio rerio]
Length = 354
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWS++ERRKI E PDMHNAEISKRL
Sbjct: 35 KTATGHIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLG 76
>gi|311274656|ref|XP_003134418.1| PREDICTED: transcription factor SOX-12-like [Sus scrofa]
Length = 258
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 34/42 (80%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWSQ ERRKI E PDMHNAEISKRLA
Sbjct: 34 KTPSGHIKRPMNAFMVWSQHERRKIMEQWPDMHNAEISKRLA 75
>gi|291409777|ref|XP_002721179.1| PREDICTED: SRY-box 11 [Oryctolagus cuniculus]
Length = 446
Score = 72.0 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 32/42 (76%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWS++ERRKI E PDMHNAEISKRL
Sbjct: 43 KTASGHIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLG 84
>gi|291190452|ref|NP_001167268.1| Transcription factor SOX-11 [Salmo salar]
gi|223648960|gb|ACN11238.1| Transcription factor SOX-11 [Salmo salar]
Length = 367
Score = 72.0 bits (175), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 39/52 (75%), Gaps = 4/52 (7%)
Query: 6 PMRATK----KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
P+++ K K HIKRPMNAFMVWS++ERRKI E PDMHNAEISKRL
Sbjct: 31 PLKSVKADWCKTATGHIKRPMNAFMVWSKVERRKIMEQSPDMHNAEISKRLG 82
>gi|185134093|ref|NP_001117655.1| rtSox24 [Oncorhynchus mykiss]
gi|2826914|dbj|BAA24575.1| rtSox24 [Oncorhynchus mykiss]
Length = 367
Score = 72.0 bits (175), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 39/52 (75%), Gaps = 4/52 (7%)
Query: 6 PMRATK----KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
P+++ K K HIKRPMNAFMVWS++ERRKI E PDMHNAEISKRL
Sbjct: 31 PLKSVKADWCKTATGHIKRPMNAFMVWSKVERRKIMEQSPDMHNAEISKRLG 82
>gi|18859399|ref|NP_571411.1| SRY-box containing gene 11a [Danio rerio]
gi|7572945|emb|CAB87378.1| Sox 11a protein [Danio rerio]
gi|141795609|gb|AAI39606.1| SRY-box containing gene 11a [Danio rerio]
Length = 354
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWS++ERRKI E PDMHNAEISKRL
Sbjct: 35 KTATGHIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLG 76
>gi|348558378|ref|XP_003464995.1| PREDICTED: transcription factor SOX-11-like [Cavia porcellus]
Length = 458
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWS++ERRKI E PDMHNAEISKRL
Sbjct: 43 KTASGHIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLG 84
>gi|259013518|ref|NP_001158501.1| sox11-like protein [Saccoglossus kowalevskii]
gi|197734711|gb|ACH73251.1| sox11-like protein [Saccoglossus kowalevskii]
Length = 339
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 33/42 (78%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWSQ+ERRKI E PDMHNAEISKRL
Sbjct: 55 KATNGHIKRPMNAFMVWSQIERRKISEHHPDMHNAEISKRLG 96
>gi|2581940|gb|AAB82425.1| SOX11 [Mus musculus]
Length = 395
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 32/42 (76%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWS++ERRKI E PDMHNAEISKRL
Sbjct: 43 KTASGHIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLG 84
>gi|327279093|ref|XP_003224293.1| PREDICTED: transcription factor SOX-11-like [Anolis carolinensis]
Length = 409
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWS++ERRKI E PDMHNAEISKRL
Sbjct: 44 KTASGHIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLG 85
>gi|322786679|gb|EFZ13063.1| hypothetical protein SINV_11080 [Solenopsis invicta]
Length = 115
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 41/54 (75%), Gaps = 1/54 (1%)
Query: 1 MGLYSPM-RATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+GL SP+ A KK HIKRPMNAFMVWS+++RRKI + P MHN+EISKRL
Sbjct: 36 VGLGSPLGSAGKKMQGEHIKRPMNAFMVWSRLQRRKIAQENPKMHNSEISKRLG 89
>gi|395507248|ref|XP_003757939.1| PREDICTED: transcription factor SOX-11 [Sarcophilus harrisii]
Length = 454
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWS++ERRKI E PDMHNAEISKRL
Sbjct: 43 KTASGHIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLG 84
>gi|348041227|ref|NP_989815.2| transcription factor SOX-4 [Gallus gallus]
gi|45685155|gb|AAS75331.1| SRY-related protein 4 [Gallus gallus]
Length = 428
Score = 71.6 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 32/42 (76%), Positives = 33/42 (78%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNA MVWSQ+ERRKI E PDMHNAEISKRL
Sbjct: 53 KTPSGHIKRPMNALMVWSQIERRKIMEQSPDMHNAEISKRLG 94
>gi|395852170|ref|XP_003798613.1| PREDICTED: transcription factor SOX-11-like [Otolemur garnettii]
Length = 441
Score = 71.2 bits (173), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWS++ERRKI E PDMHNAEISKRL
Sbjct: 43 KTASGHIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLG 84
>gi|4507161|ref|NP_003099.1| transcription factor SOX-11 [Homo sapiens]
gi|426334630|ref|XP_004028848.1| PREDICTED: transcription factor SOX-11 [Gorilla gorilla gorilla]
gi|1351142|sp|P35716.2|SOX11_HUMAN RecName: Full=Transcription factor SOX-11
gi|974248|gb|AAB08518.1| SOX-11 [Homo sapiens]
gi|6527112|dbj|BAA88122.1| SOX11 [Homo sapiens]
gi|62630185|gb|AAX88930.1| unknown [Homo sapiens]
gi|182888123|gb|AAI60119.1| SRY (sex determining region Y)-box 11 [synthetic construct]
gi|208968775|dbj|BAG74226.1| SRY (sex determining region Y)-box 11 [synthetic construct]
Length = 441
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWS++ERRKI E PDMHNAEISKRL
Sbjct: 43 KTASGHIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLG 84
>gi|109101920|ref|XP_001098988.1| PREDICTED: transcription factor SOX-11 [Macaca mulatta]
Length = 441
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWS++ERRKI E PDMHNAEISKRL
Sbjct: 43 KTASGHIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLG 84
>gi|2982742|dbj|BAA25297.1| SOX11 [Gallus gallus]
Length = 396
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWS++ERRKI E PDMHNAEISKRL
Sbjct: 43 KTASGHIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLG 84
>gi|296224546|ref|XP_002758097.1| PREDICTED: transcription factor SOX-11 [Callithrix jacchus]
Length = 448
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWS++ERRKI E PDMHNAEISKRL
Sbjct: 43 KTASGHIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLG 84
>gi|194032518|gb|ACF33141.1| SoxC [Acropora millepora]
Length = 292
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 30/37 (81%), Positives = 33/37 (89%)
Query: 17 HIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
H+KRPMNAFMVWSQ+ERRK+ E PDMHNAEISKRL
Sbjct: 34 HVKRPMNAFMVWSQIERRKMAEEHPDMHNAEISKRLG 70
>gi|449498039|ref|XP_004176906.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor SOX-11
[Taeniopygia guttata]
Length = 403
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWS++ERRKI E PDMHNAEISKRL
Sbjct: 43 KTASGHIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLG 84
>gi|335285932|ref|XP_003354985.1| PREDICTED: transcription factor SOX-11-like [Sus scrofa]
Length = 447
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWS++ERRKI E PDMHNAEISKRL
Sbjct: 43 KTASGHIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLG 84
>gi|452768796|gb|AGG11401.1| SRY-box containing protein 11a [Larimichthys crocea]
Length = 366
Score = 71.2 bits (173), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWS++ERRKI E PDMHNAEISKRL
Sbjct: 40 KTATGHIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLG 81
>gi|295291743|gb|ADF87550.1| Sox11a [Epinephelus coioides]
Length = 368
Score = 71.2 bits (173), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWS++ERRKI E PDMHNAEISKRL
Sbjct: 40 KTATGHIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLG 81
>gi|18859401|ref|NP_571412.1| SRY-box containing gene 11b [Danio rerio]
gi|7572947|emb|CAB87379.1| Sox 11b protein [Danio rerio]
Length = 368
Score = 71.2 bits (173), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWS++ERRKI E PDMHNAEISKRL
Sbjct: 40 KTATGHIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLG 81
>gi|126303246|ref|XP_001372169.1| PREDICTED: transcription factor SOX-11-like [Monodelphis
domestica]
Length = 453
Score = 71.2 bits (173), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWS++ERRKI E PDMHNAEISKRL
Sbjct: 43 KTASGHIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLG 84
>gi|327270033|ref|XP_003219796.1| PREDICTED: transcription factor SOX-4-like [Anolis carolinensis]
Length = 353
Score = 71.2 bits (173), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWSQ+ERRKI + PDMHNAEISKRL
Sbjct: 57 KTPSGHIKRPMNAFMVWSQIERRKIMKQSPDMHNAEISKRLG 98
>gi|410898106|ref|XP_003962539.1| PREDICTED: transcription factor Sox-11-B-like [Takifugu rubripes]
gi|33415930|gb|AAQ18502.1| transcription factor Sox11 [Takifugu rubripes]
Length = 368
Score = 70.9 bits (172), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWS++ERRKI E PDMHNAEISKRL
Sbjct: 40 KTATGHIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLG 81
>gi|340721031|ref|XP_003398930.1| PREDICTED: hypothetical protein LOC100647190 [Bombus terrestris]
Length = 379
Score = 70.9 bits (172), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 41/54 (75%), Gaps = 1/54 (1%)
Query: 1 MGLYSPMRAT-KKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+GL SP+ T KK HIKRPMNAFMVWS+++RRKI + P MHN+EISKRL
Sbjct: 32 VGLGSPLGPTAKKAQVEHIKRPMNAFMVWSRLQRRKIAQENPKMHNSEISKRLG 85
>gi|195590202|ref|XP_002084835.1| GD12629 [Drosophila simulans]
gi|194196844|gb|EDX10420.1| GD12629 [Drosophila simulans]
Length = 573
Score = 70.9 bits (172), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 30/44 (68%), Positives = 36/44 (81%)
Query: 10 TKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
TK+ N HIKRPMNAFMVWS+++RRKI + P MHN+EISKRL
Sbjct: 240 TKRQNEEHIKRPMNAFMVWSRLQRRKIAQDNPKMHNSEISKRLG 283
>gi|403297250|ref|XP_003939489.1| PREDICTED: transcription factor SOX-11-like [Saimiri boliviensis
boliviensis]
Length = 549
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWS++ERRKI E PDMHNAEISKRL
Sbjct: 43 KTASGHIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLG 84
>gi|111798|pir||S19597 transcription factor SOX4 - rat
Length = 90
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/42 (78%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWSQ+ERRKI E PDMHNAEISKRL
Sbjct: 2 KTPSGHIKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLG 43
>gi|47230078|emb|CAG10492.1| unnamed protein product [Tetraodon nigroviridis]
Length = 369
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWS++ERRKI E PDMHNAEISKRL
Sbjct: 40 KTATGHIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLG 81
>gi|226709487|sp|P40650.2|SX11B_XENLA RecName: Full=Transcription factor Sox-11-B; AltName:
Full=Transcription factor Sox-13; Short=xSox-13;
AltName: Full=XLS13B
gi|47124742|gb|AAH70707.1| SOX11 protein [Xenopus laevis]
Length = 374
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWS++ERRKI E PDMHNAEISKRL
Sbjct: 39 KTATGHIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLG 80
>gi|148236735|ref|NP_001084325.1| transcription factor Sox-11-B [Xenopus laevis]
gi|2522257|dbj|BAA22779.1| XLS13B protein [Xenopus laevis]
Length = 375
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWS++ERRKI E PDMHNAEISKRL
Sbjct: 39 KTATGHIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLG 80
>gi|397481752|ref|XP_003846134.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor SOX-11 [Pan
paniscus]
Length = 391
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWS++ERRKI E PDMHNAEISKRL
Sbjct: 43 KTASGHIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLG 84
>gi|21357781|ref|NP_648695.1| Sox21b, isoform A [Drosophila melanogaster]
gi|442632264|ref|NP_001261828.1| Sox21b, isoform B [Drosophila melanogaster]
gi|16197817|gb|AAL13542.1| GH07353p [Drosophila melanogaster]
gi|23093490|gb|AAF49754.2| Sox21b, isoform A [Drosophila melanogaster]
gi|220945316|gb|ACL85201.1| Sox21b-PA [synthetic construct]
gi|220952556|gb|ACL88821.1| Sox21b-PA [synthetic construct]
gi|440215767|gb|AGB94521.1| Sox21b, isoform B [Drosophila melanogaster]
Length = 571
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 30/44 (68%), Positives = 36/44 (81%)
Query: 10 TKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
TK+ N HIKRPMNAFMVWS+++RRKI + P MHN+EISKRL
Sbjct: 240 TKRQNEEHIKRPMNAFMVWSRLQRRKIAQDNPKMHNSEISKRLG 283
>gi|45383978|ref|NP_990518.1| transcription factor SOX-11 [Gallus gallus]
gi|1351141|sp|P48435.1|SOX11_CHICK RecName: Full=Transcription factor SOX-11; Short=cSox11
gi|595499|gb|AAB09664.1| Sox11 transcription factor [Gallus gallus]
Length = 396
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWS++ERRKI E PDMHNAEISKRL
Sbjct: 43 KTASGHIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLG 84
>gi|355748268|gb|EHH52751.1| Transcription factor SOX-4 [Macaca fascicularis]
Length = 159
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/42 (78%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWSQ+ERRKI E PDMHNAEISKRL
Sbjct: 25 KTPSGHIKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLG 66
>gi|195327518|ref|XP_002030465.1| GM24556 [Drosophila sechellia]
gi|194119408|gb|EDW41451.1| GM24556 [Drosophila sechellia]
Length = 575
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 30/44 (68%), Positives = 36/44 (81%)
Query: 10 TKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
TK+ N HIKRPMNAFMVWS+++RRKI + P MHN+EISKRL
Sbjct: 240 TKRQNEEHIKRPMNAFMVWSRLQRRKIAQDNPKMHNSEISKRLG 283
>gi|1395198|dbj|BAA13006.1| DNA-binding protein [Xenopus laevis]
Length = 382
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWS++ERRKI E PDMHNAEISKRL
Sbjct: 41 KTATGHIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLG 82
>gi|37719626|gb|AAR01925.1| SRY-box containing gene 11a [Amphilophus citrinellus]
Length = 345
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWS++ERRKI E PDMHNAEISKRL
Sbjct: 40 KTATGHIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLG 81
>gi|383864558|ref|XP_003707745.1| PREDICTED: uncharacterized protein LOC100878719 [Megachile
rotundata]
Length = 385
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 41/54 (75%), Gaps = 1/54 (1%)
Query: 1 MGLYSPMR-ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+GL SP+ TKK HIKRPMNAFMVWS+++RRKI + P MHN+EISKRL
Sbjct: 34 VGLGSPLGPTTKKAQVEHIKRPMNAFMVWSRLQRRKIAQENPKMHNSEISKRLG 87
>gi|37719638|gb|AAR01931.1| SRY-box containing gene 11a [Gnathonemus petersii]
Length = 358
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWS++ERRKI E PDMHNAEISKRL
Sbjct: 39 KTATGHIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLG 80
>gi|226709486|sp|Q91731.2|SX11A_XENLA RecName: Full=Transcription factor Sox-11-A; Short=xSox-11;
AltName: Full=XLS13A
Length = 382
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWS++ERRKI E PDMHNAEISKRL
Sbjct: 41 KTATGHIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLG 82
>gi|198465214|ref|XP_002134931.1| GA23525 [Drosophila pseudoobscura pseudoobscura]
gi|198150060|gb|EDY73558.1| GA23525 [Drosophila pseudoobscura pseudoobscura]
Length = 590
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 30/44 (68%), Positives = 36/44 (81%)
Query: 10 TKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
TK+ N HIKRPMNAFMVWS+++RRKI + P MHN+EISKRL
Sbjct: 245 TKRQNEEHIKRPMNAFMVWSRLQRRKIAQDNPKMHNSEISKRLG 288
>gi|37719650|gb|AAR01937.1| SRY-box containing gene 11a [Oreochromis niloticus]
Length = 338
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWS++ERRKI E PDMHNAEISKRL
Sbjct: 33 KTATGHIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLG 74
>gi|442632266|ref|NP_001261829.1| Sox21b, isoform C [Drosophila melanogaster]
gi|440215768|gb|AGB94522.1| Sox21b, isoform C [Drosophila melanogaster]
Length = 587
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 30/44 (68%), Positives = 36/44 (81%)
Query: 10 TKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
TK+ N HIKRPMNAFMVWS+++RRKI + P MHN+EISKRL
Sbjct: 240 TKRQNEEHIKRPMNAFMVWSRLQRRKIAQDNPKMHNSEISKRLG 283
>gi|194870742|ref|XP_001972712.1| GG13734 [Drosophila erecta]
gi|190654495|gb|EDV51738.1| GG13734 [Drosophila erecta]
Length = 581
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/44 (68%), Positives = 36/44 (81%)
Query: 10 TKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
TK+ N HIKRPMNAFMVWS+++RRKI + P MHN+EISKRL
Sbjct: 243 TKRQNEEHIKRPMNAFMVWSRLQRRKIAQDNPKMHNSEISKRLG 286
>gi|215276952|ref|NP_001135834.1| transcription factor Sox-11-A [Xenopus laevis]
gi|2522255|dbj|BAA22778.1| XLS13A protein [Xenopus laevis]
Length = 382
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWS++ERRKI E PDMHNAEISKRL
Sbjct: 41 KTATGHIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLG 82
>gi|348531573|ref|XP_003453283.1| PREDICTED: transcription factor Sox-11-B-like [Oreochromis
niloticus]
Length = 363
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWS++ERRKI E PDMHNAEISKRL
Sbjct: 40 KTATGHIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLG 81
>gi|37719632|gb|AAR01928.1| SRY-box containing gene 11b [Elops hawaiensis]
Length = 340
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWS++ERRKI E PDMHNAEISKRL
Sbjct: 36 KTATGHIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLG 77
>gi|50925405|gb|AAH78643.1| SRY-box containing gene 11 [Mus musculus]
Length = 393
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWS++ERRKI E PDMHNAEISKRL
Sbjct: 43 KTASGHIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLG 84
>gi|30024612|dbj|BAC75670.1| transcriptional factor SOX11 [Mus musculus]
gi|148705017|gb|EDL36964.1| mCG11193 [Mus musculus]
Length = 395
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWS++ERRKI E PDMHNAEISKRL
Sbjct: 43 KTASGHIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLG 84
>gi|16758068|ref|NP_445801.1| transcription factor SOX-11 [Rattus norvegicus]
gi|109894872|sp|P0C1G9.1|SOX11_RAT RecName: Full=Transcription factor SOX-11
gi|3650366|emb|CAA06166.1| Sox11 protein [Rattus norvegicus]
gi|149051035|gb|EDM03208.1| SRY-box containing gene 11 [Rattus norvegicus]
Length = 395
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWS++ERRKI E PDMHNAEISKRL
Sbjct: 43 KTASGHIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLG 84
>gi|431911815|gb|ELK13959.1| Transcription factor SOX-11 [Pteropus alecto]
Length = 229
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWS++ERRKI E PDMHNAEISKRL
Sbjct: 43 KTASGHIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLG 84
>gi|62234366|ref|NP_033260.4| transcription factor SOX-11 [Mus musculus]
gi|81885896|sp|Q7M6Y2.1|SOX11_MOUSE RecName: Full=Transcription factor SOX-11
gi|37619754|tpg|DAA01568.1| TPA_exp: SRY-box containing protein [Mus musculus]
gi|38328149|gb|AAH62095.1| SRY-box containing gene 11 [Mus musculus]
gi|74138842|dbj|BAE27226.1| unnamed protein product [Mus musculus]
gi|74227100|dbj|BAE38341.1| unnamed protein product [Mus musculus]
Length = 395
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWS++ERRKI E PDMHNAEISKRL
Sbjct: 43 KTASGHIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLG 84
>gi|195427297|ref|XP_002061713.1| GK17144 [Drosophila willistoni]
gi|194157798|gb|EDW72699.1| GK17144 [Drosophila willistoni]
Length = 618
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/44 (68%), Positives = 36/44 (81%)
Query: 10 TKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
TK+ N HIKRPMNAFMVWS+++RRKI + P MHN+EISKRL
Sbjct: 281 TKRQNEEHIKRPMNAFMVWSRLQRRKIAQDNPKMHNSEISKRLG 324
>gi|301771642|ref|XP_002921241.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor SOX-11-like
[Ailuropoda melanoleuca]
Length = 386
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWS++ERRKI E PDMHNAEISKRL
Sbjct: 43 KTASGHIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLG 84
>gi|195494278|ref|XP_002094768.1| GE20028 [Drosophila yakuba]
gi|194180869|gb|EDW94480.1| GE20028 [Drosophila yakuba]
Length = 584
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/44 (68%), Positives = 36/44 (81%)
Query: 10 TKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
TK+ N HIKRPMNAFMVWS+++RRKI + P MHN+EISKRL
Sbjct: 249 TKRQNEEHIKRPMNAFMVWSRLQRRKIAQDNPKMHNSEISKRLG 292
>gi|37719640|gb|AAR01932.1| SRY-box containing gene 11b [Gnathonemus petersii]
Length = 353
Score = 70.9 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 32/42 (76%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWS++ERRKI E PDMHNAEISKRL
Sbjct: 39 KTATGHIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLG 80
>gi|195378570|ref|XP_002048056.1| GJ11556 [Drosophila virilis]
gi|194155214|gb|EDW70398.1| GJ11556 [Drosophila virilis]
Length = 627
Score = 70.9 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/44 (68%), Positives = 36/44 (81%)
Query: 10 TKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
TK+ N HIKRPMNAFMVWS+++RRKI + P MHN+EISKRL
Sbjct: 282 TKRQNEEHIKRPMNAFMVWSRLQRRKIAQDNPKMHNSEISKRLG 325
>gi|37719628|gb|AAR01926.1| SRY-box containing gene 11b [Arapaima gigas]
Length = 362
Score = 70.9 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 32/42 (76%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWS++ERRKI E PDMHNAEISKRL
Sbjct: 40 KTATGHIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLG 81
>gi|37719646|gb|AAR01935.1| SRY-box containing gene 11 [Lepisosteus platyrhincus]
Length = 352
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWS++ERRKI E PDMHNAEISKRL
Sbjct: 39 KTATGHIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLG 80
>gi|426226229|ref|XP_004007251.1| PREDICTED: transcription factor SOX-11 [Ovis aries]
Length = 404
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWS++ERRKI E PDMHNAEISKRL
Sbjct: 43 KTASGHIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLG 84
>gi|307196017|gb|EFN77742.1| Transcription factor SOX-14 [Harpegnathos saltator]
Length = 353
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 41/54 (75%), Gaps = 1/54 (1%)
Query: 1 MGLYSPMR-ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+GL SP+ A KK HIKRPMNAFMVWS+++RRKI + P MHN+EISKRL
Sbjct: 3 VGLGSPLGPAGKKVQAEHIKRPMNAFMVWSRLQRRKIAQENPKMHNSEISKRLG 56
>gi|4099265|gb|AAD00562.1| transcriptional regulator Sox-11B [Danio rerio]
Length = 368
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWS++ERRKI E PDMHNAEISKRL
Sbjct: 40 KTATGHIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLG 81
>gi|194747992|ref|XP_001956433.1| GF25205 [Drosophila ananassae]
gi|190623715|gb|EDV39239.1| GF25205 [Drosophila ananassae]
Length = 611
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/45 (66%), Positives = 36/45 (80%)
Query: 9 ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
TK+ N HIKRPMNAFMVWS+++RRKI + P MHN+EISKRL
Sbjct: 257 TTKRQNEEHIKRPMNAFMVWSRLQRRKIAQDNPKMHNSEISKRLG 301
>gi|432939096|ref|XP_004082579.1| PREDICTED: transcription factor SOX-11-like [Oryzias latipes]
Length = 356
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWS++ERRKI E PDMHNAEISKRL
Sbjct: 40 KTATGHIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLG 81
>gi|226986|prf||1612347E Sra4 gene
Length = 86
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/42 (78%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWSQ+ERRKI E PDMHNAEISKRL
Sbjct: 2 KTPSGHIKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLG 43
>gi|227336646|gb|ACP21270.1| SRY-box containing gene 11 [Oryzias latipes]
Length = 360
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWS++ERRKI E PDMHNAEISKRL
Sbjct: 40 KTATGHIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLG 81
>gi|195015701|ref|XP_001984255.1| GH16346 [Drosophila grimshawi]
gi|193897737|gb|EDV96603.1| GH16346 [Drosophila grimshawi]
Length = 645
Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/44 (68%), Positives = 36/44 (81%)
Query: 10 TKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
TK+ N HIKRPMNAFMVWS+++RRKI + P MHN+EISKRL
Sbjct: 265 TKRQNEEHIKRPMNAFMVWSRLQRRKIAQDNPKMHNSEISKRLG 308
>gi|37719622|gb|AAR01923.1| SRY-box containing gene 11 [Acipenser baerii]
Length = 313
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/37 (83%), Positives = 33/37 (89%)
Query: 17 HIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
HIKRPMNAFMVWS++ERRKI E PDMHNAEISKRL
Sbjct: 5 HIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLG 41
>gi|56118716|ref|NP_001008053.1| transcription factor Sox-11 [Xenopus (Silurana) tropicalis]
gi|82181392|sp|Q66JF1.1|SOX11_XENTR RecName: Full=Transcription factor Sox-11
gi|51703667|gb|AAH80939.1| SRY (sex determining region Y)-box 11 [Xenopus (Silurana)
tropicalis]
gi|68533328|gb|AAY98914.1| sox11 [Xenopus (Silurana) tropicalis]
Length = 383
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWS++ERRKI E PDMHNAEISKRL
Sbjct: 42 KTATGHIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLG 83
>gi|365813158|pdb|3U2B|C Chain C, Structure Of The Sox4 Hmg Domain Bound To Dna
Length = 79
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/38 (84%), Positives = 33/38 (86%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
HIKRPMNAFMVWSQ+ERRKI E PDMHNAEISKRL
Sbjct: 1 GHIKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLG 38
>gi|388594932|gb|AFK74892.1| transcription factor HvSoxC, partial [Hydra vulgaris]
Length = 289
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 39/43 (90%)
Query: 11 KKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
KK++ +H+KRPMNAFMVWSQ+ER+K+ ++ PDMHNAEIS+RL
Sbjct: 45 KKSSMDHVKRPMNAFMVWSQIERKKMADIYPDMHNAEISRRLG 87
>gi|195128971|ref|XP_002008932.1| GI11537 [Drosophila mojavensis]
gi|193920541|gb|EDW19408.1| GI11537 [Drosophila mojavensis]
Length = 614
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/44 (68%), Positives = 36/44 (81%)
Query: 10 TKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
TK+ N HIKRPMNAFMVWS+++RRKI + P MHN+EISKRL
Sbjct: 266 TKRQNEEHIKRPMNAFMVWSRLQRRKIAQDNPKMHNSEISKRLG 309
>gi|348518451|ref|XP_003446745.1| PREDICTED: hypothetical protein LOC100694062 [Oreochromis
niloticus]
Length = 394
Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 32/42 (76%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWS++ERRKI E PDMHNAEISKRL
Sbjct: 44 KTASGHIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLG 85
>gi|444721681|gb|ELW62404.1| Transcription factor SOX-11 [Tupaia chinensis]
Length = 256
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWS++ERRKI E PDMHNAEISKRL
Sbjct: 63 KTASGHIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLG 104
>gi|71892466|ref|NP_001025449.1| transcription factor SOX-12 [Danio rerio]
Length = 355
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/42 (78%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWSQ+ERRKI E PDMHNAEISKRL
Sbjct: 47 KTPTGHIKRPMNAFMVWSQIERRKIMEQWPDMHNAEISKRLG 88
>gi|332812546|ref|XP_003308919.1| PREDICTED: transcription factor SOX-11 [Pan troglodytes]
Length = 557
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/37 (83%), Positives = 33/37 (89%)
Query: 17 HIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
HIKRPMNAFMVWS++ERRKI E PDMHNAEISKRL
Sbjct: 164 HIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLG 200
>gi|355721287|gb|AES07214.1| SRY -box 12 [Mustela putorius furo]
Length = 81
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/42 (78%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWSQ+ERRKI E PDMHNAEISKRL
Sbjct: 5 KTPSGHIKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLG 46
>gi|54694981|gb|AAV38122.1| sox transcription factor 4 [Acipenser schrenckii]
Length = 76
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/38 (84%), Positives = 33/38 (86%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
HIKRPMNAFMVWSQ+ERRKI E PDMHNAEISKRL
Sbjct: 1 GHIKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLG 38
>gi|270008130|gb|EFA04578.1| Sox21b [Tribolium castaneum]
Length = 379
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 42/52 (80%), Gaps = 2/52 (3%)
Query: 2 GLYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
GL +P +ATKK +HIKRPMNAFMVWS+++RRKI + P MHN+EISKRL
Sbjct: 28 GLQNP-QATKKQE-DHIKRPMNAFMVWSRLQRRKIAQENPKMHNSEISKRLG 77
>gi|449679111|ref|XP_002160791.2| PREDICTED: uncharacterized protein LOC100212529 [Hydra
magnipapillata]
Length = 295
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 39/43 (90%)
Query: 11 KKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
KK++ +H+KRPMNAFMVWSQ+ER+K+ ++ PDMHNAEIS+RL
Sbjct: 45 KKSSMDHVKRPMNAFMVWSQIERKKMADIYPDMHNAEISRRLG 87
>gi|116283717|gb|AAH25789.1| SOX11 protein [Homo sapiens]
Length = 173
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWS++ERRKI E PDMHNAEISKRL
Sbjct: 43 KTASGHIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLG 84
>gi|395860776|ref|XP_003802682.1| PREDICTED: transcription factor SOX-12 [Otolemur garnettii]
Length = 470
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/42 (76%), Positives = 33/42 (78%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWSQ ERRKI + PDMHNAEISKRL
Sbjct: 190 KTPSGHIKRPMNAFMVWSQHERRKIMDQWPDMHNAEISKRLG 231
>gi|91083765|ref|XP_971967.1| PREDICTED: similar to Sox21b CG32139-PA [Tribolium castaneum]
Length = 398
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 42/52 (80%), Gaps = 2/52 (3%)
Query: 2 GLYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
GL +P +ATKK +HIKRPMNAFMVWS+++RRKI + P MHN+EISKRL
Sbjct: 28 GLQNP-QATKKQE-DHIKRPMNAFMVWSRLQRRKIAQENPKMHNSEISKRLG 77
>gi|340523185|gb|AEK48080.1| transcription factor SOX4 [Culter alburnus]
Length = 124
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/42 (78%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWSQ+ERRKI E PDMHNAEISKRL
Sbjct: 47 KTPTGHIKRPMNAFMVWSQIERRKIMEQWPDMHNAEISKRLG 88
>gi|395505534|ref|XP_003757095.1| PREDICTED: transcription factor SOX-12 [Sarcophilus harrisii]
Length = 424
Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/42 (76%), Positives = 33/42 (78%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWSQ ERRKI + PDMHNAEISKRL
Sbjct: 127 KTPSGHIKRPMNAFMVWSQHERRKIMDQWPDMHNAEISKRLG 168
>gi|332018676|gb|EGI59248.1| Transcription factor Sox-14 [Acromyrmex echinatior]
Length = 151
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Query: 1 MGLYSPMRATKKNNP-NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
MG SP+ + K P HIKRPMNAFMVWS+++RRKI + P MHN+EISKRL
Sbjct: 44 MGGSSPLGSAGKKVPVEHIKRPMNAFMVWSRLQRRKIAQENPKMHNSEISKRLG 97
>gi|410990177|ref|XP_004001326.1| PREDICTED: transcription factor SOX-11-like, partial [Felis
catus]
Length = 97
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWS++ERRKI E PDMHNAEISKRL
Sbjct: 43 KTASGHIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLG 84
>gi|121955987|gb|ABM65698.1| HMG-box domain protein [Alligator sinensis]
Length = 298
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/42 (73%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIK PMNAFMVWSQ+ERRKI + +PDMHNAEISKRL
Sbjct: 38 KTPSGHIKPPMNAFMVWSQLERRKIMDQRPDMHNAEISKRLG 79
>gi|348582045|ref|XP_003476787.1| PREDICTED: transcription factor SOX-12-like [Cavia porcellus]
Length = 310
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 32/42 (76%), Positives = 33/42 (78%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWSQ ERRKI + PDMHNAEISKRL
Sbjct: 34 KTPSGHIKRPMNAFMVWSQHERRKIMDQWPDMHNAEISKRLG 75
>gi|380016498|ref|XP_003692220.1| PREDICTED: uncharacterized protein LOC100869820 [Apis florea]
Length = 391
Score = 68.6 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 33/54 (61%), Positives = 41/54 (75%), Gaps = 1/54 (1%)
Query: 1 MGLYSPMRAT-KKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+GL SP+ + KK HIKRPMNAFMVWS+++RRKI + P MHN+EISKRL
Sbjct: 38 VGLGSPLGPSPKKAQVEHIKRPMNAFMVWSRLQRRKIAQENPKMHNSEISKRLG 91
>gi|1395196|dbj|BAA13005.1| DNA-binding protein [Xenopus laevis]
Length = 160
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWS++ERRKI E PDMHNAEISKRL
Sbjct: 41 KTATGHIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLG 82
>gi|332249009|ref|XP_003273656.1| PREDICTED: transcription factor SOX-12 [Nomascus leucogenys]
Length = 295
Score = 68.6 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 32/42 (76%), Positives = 33/42 (78%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWSQ ERRKI + PDMHNAEISKRL
Sbjct: 34 KTPSGHIKRPMNAFMVWSQHERRKIMDQWPDMHNAEISKRLG 75
>gi|110760895|ref|XP_001121937.1| PREDICTED: hypothetical protein LOC726180 [Apis mellifera]
Length = 393
Score = 68.6 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 33/54 (61%), Positives = 41/54 (75%), Gaps = 1/54 (1%)
Query: 1 MGLYSPMRAT-KKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+GL SP+ + KK HIKRPMNAFMVWS+++RRKI + P MHN+EISKRL
Sbjct: 38 VGLGSPLGPSPKKAQVEHIKRPMNAFMVWSRLQRRKIAQENPKMHNSEISKRLG 91
>gi|341882442|gb|EGT38377.1| hypothetical protein CAEBREN_29074 [Caenorhabditis brenneri]
Length = 308
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Query: 5 SPMRA-TKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+P R+ T + HIKRP+N FM+WS+ +RRKICE PDMHNAEISK+L
Sbjct: 39 TPQRSETPQTAAAHIKRPLNPFMIWSKTQRRKICEAYPDMHNAEISKQLG 88
>gi|341904515|gb|EGT60348.1| hypothetical protein CAEBREN_00131 [Caenorhabditis brenneri]
Length = 308
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Query: 5 SPMRA-TKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+P R+ T + HIKRP+N FM+WS+ +RRKICE PDMHNAEISK+L
Sbjct: 39 TPQRSETPQTAAAHIKRPLNPFMIWSKTQRRKICEAYPDMHNAEISKQLG 88
>gi|2341056|gb|AAB69627.1| SOX22 protein [Homo sapiens]
Length = 315
Score = 68.6 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 32/42 (76%), Positives = 33/42 (78%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWSQ ERRKI + PDMHNAEISKRL
Sbjct: 34 KTPSGHIKRPMNAFMVWSQHERRKIMDQWPDMHNAEISKRLG 75
>gi|327282868|ref|XP_003226164.1| PREDICTED: transcription factor SOX-12-like [Anolis carolinensis]
Length = 328
Score = 68.6 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 32/42 (76%), Positives = 33/42 (78%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWSQ ERRKI + PDMHNAEISKRL
Sbjct: 37 KTPSGHIKRPMNAFMVWSQNERRKIMDQWPDMHNAEISKRLG 78
>gi|402882900|ref|XP_003904970.1| PREDICTED: transcription factor SOX-12 [Papio anubis]
Length = 314
Score = 68.2 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 32/42 (76%), Positives = 33/42 (78%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWSQ ERRKI + PDMHNAEISKRL
Sbjct: 34 KTPSGHIKRPMNAFMVWSQHERRKIMDQWPDMHNAEISKRLG 75
>gi|73992081|ref|XP_542944.2| PREDICTED: transcription factor SOX-12 [Canis lupus familiaris]
Length = 321
Score = 68.2 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 32/42 (76%), Positives = 33/42 (78%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWSQ ERRKI + PDMHNAEISKRL
Sbjct: 34 KTPSGHIKRPMNAFMVWSQHERRKIMDQWPDMHNAEISKRLG 75
>gi|54020662|ref|NP_035568.1| transcription factor SOX-12 [Mus musculus]
gi|62298417|sp|Q04890.2|SOX12_MOUSE RecName: Full=Transcription factor SOX-12
gi|44890608|gb|AAH67019.1| Sox12 protein [Mus musculus]
Length = 314
Score = 68.2 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 32/42 (76%), Positives = 33/42 (78%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWSQ ERRKI + PDMHNAEISKRL
Sbjct: 34 KTPSGHIKRPMNAFMVWSQHERRKIMDQWPDMHNAEISKRLG 75
>gi|395752152|ref|XP_003779372.1| PREDICTED: transcription factor SOX-12 [Pongo abelii]
Length = 314
Score = 68.2 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 32/42 (76%), Positives = 33/42 (78%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWSQ ERRKI + PDMHNAEISKRL
Sbjct: 34 KTPSGHIKRPMNAFMVWSQHERRKIMDQWPDMHNAEISKRLG 75
>gi|410215930|gb|JAA05184.1| SRY (sex determining region Y)-box 12 [Pan troglodytes]
gi|410304828|gb|JAA31014.1| SRY (sex determining region Y)-box 12 [Pan troglodytes]
Length = 316
Score = 68.2 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 32/42 (76%), Positives = 33/42 (78%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWSQ ERRKI + PDMHNAEISKRL
Sbjct: 34 KTPSGHIKRPMNAFMVWSQHERRKIMDQWPDMHNAEISKRLG 75
>gi|21264339|ref|NP_008874.2| transcription factor SOX-12 [Homo sapiens]
gi|115502454|sp|O15370.2|SOX12_HUMAN RecName: Full=Transcription factor SOX-12; AltName: Full=Protein
SOX-22
gi|45501272|gb|AAH67361.1| SOX12 protein [Homo sapiens]
gi|119631088|gb|EAX10683.1| SRY (sex determining region Y)-box 12 [Homo sapiens]
gi|410248608|gb|JAA12271.1| SRY (sex determining region Y)-box 12 [Pan troglodytes]
Length = 315
Score = 68.2 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 32/42 (76%), Positives = 33/42 (78%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWSQ ERRKI + PDMHNAEISKRL
Sbjct: 34 KTPSGHIKRPMNAFMVWSQHERRKIMDQWPDMHNAEISKRLG 75
>gi|426219347|ref|XP_004003887.1| PREDICTED: transcription factor SOX-2 [Ovis aries]
Length = 407
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/43 (65%), Positives = 37/43 (86%)
Query: 11 KKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+KN+P+H+KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 151 QKNSPDHVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 193
>gi|297260084|ref|XP_001107541.2| PREDICTED: transcription factor SOX-12-like [Macaca mulatta]
Length = 232
Score = 67.8 bits (164), Expect = 7e-10, Method: Composition-based stats.
Identities = 32/42 (76%), Positives = 33/42 (78%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWSQ ERRKI + PDMHNAEISKRL
Sbjct: 34 KTPSGHIKRPMNAFMVWSQHERRKIMDQWPDMHNAEISKRLG 75
>gi|281353991|gb|EFB29575.1| hypothetical protein PANDA_014951 [Ailuropoda melanoleuca]
Length = 192
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 33/42 (78%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWSQ ERRKI + PDMHNAEISKRL
Sbjct: 14 KTPSGHIKRPMNAFMVWSQHERRKIMDQWPDMHNAEISKRLG 55
>gi|274325105|ref|NP_001162121.1| SRY (sex determining region Y)-box 12 [Rattus norvegicus]
Length = 314
Score = 67.8 bits (164), Expect = 8e-10, Method: Composition-based stats.
Identities = 32/42 (76%), Positives = 33/42 (78%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWSQ ERRKI + PDMHNAEISKRL
Sbjct: 34 KTPSGHIKRPMNAFMVWSQHERRKIMDQWPDMHNAEISKRLG 75
>gi|357607487|gb|EHJ65527.1| hypothetical protein KGM_19695 [Danaus plexippus]
Length = 222
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 38/45 (84%)
Query: 10 TKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLAL 54
++ +NP HIKRPMNAFMVWS+++R+KI + P +HN+EISKRL L
Sbjct: 17 SRNSNPYHIKRPMNAFMVWSRLQRKKISSLNPKLHNSEISKRLGL 61
>gi|350416778|ref|XP_003491098.1| PREDICTED: hypothetical protein LOC100745025 [Bombus impatiens]
Length = 385
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/50 (64%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Query: 5 SPMRAT-KKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
SP+ T KK HIKRPMNAFMVWS+++RRKI + P MHN+EISKRL
Sbjct: 38 SPLGPTAKKAQVEHIKRPMNAFMVWSRLQRRKIAQENPKMHNSEISKRLG 87
>gi|345494294|ref|XP_001606557.2| PREDICTED: hypothetical protein LOC100122949 [Nasonia
vitripennis]
Length = 402
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 40/56 (71%), Gaps = 3/56 (5%)
Query: 1 MGLYSPM---RATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+GL SP+ A K+ +HIKRPMNAFMVWS+ +R+KI P MHN+EISKRL
Sbjct: 40 VGLTSPLGSASAAKRMQADHIKRPMNAFMVWSRSQRKKIAHDNPKMHNSEISKRLG 95
>gi|193083005|ref|NP_001122334.1| HMG transcription factor SoxC [Ciona intestinalis]
gi|70571240|dbj|BAE06706.1| transcription factor protein [Ciona intestinalis]
Length = 525
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/54 (57%), Positives = 40/54 (74%), Gaps = 3/54 (5%)
Query: 3 LYSPMRATKKN---NPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
L P R+++K P +IKRPMNAFM+WSQ+ERRKI E P++HNAEIS+ L
Sbjct: 126 LPPPSRSSQKKLAARPGYIKRPMNAFMIWSQIERRKIMEKTPELHNAEISRNLG 179
>gi|426390685|ref|XP_004061730.1| PREDICTED: transcription factor SOX-12, partial [Gorilla gorilla
gorilla]
Length = 135
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 33/42 (78%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWSQ ERRKI + PDMHNAEISKRL
Sbjct: 34 KTPSGHIKRPMNAFMVWSQHERRKIMDQWPDMHNAEISKRLG 75
>gi|363741516|ref|XP_003642514.1| PREDICTED: transcription factor SOX-12-like [Gallus gallus]
Length = 162
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 33/42 (78%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWSQ ERRKI + PDMHNAEISKRL
Sbjct: 32 KTPSGHIKRPMNAFMVWSQHERRKIMDQWPDMHNAEISKRLG 73
>gi|332857836|ref|XP_003316841.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor SOX-12 [Pan
troglodytes]
Length = 316
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/42 (73%), Positives = 33/42 (78%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWSQ ERRKI + P+MHNAEISKRL
Sbjct: 34 KTPSGHIKRPMNAFMVWSQHERRKIMDQWPEMHNAEISKRLG 75
>gi|357619728|gb|EHJ72187.1| Sox21b [Danaus plexippus]
Length = 201
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 39/56 (69%), Gaps = 3/56 (5%)
Query: 1 MGLYSPMRAT---KKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
MG S M KK+ HIKRPMNAFMVWS+++RRKI + P MHN+EISKRL
Sbjct: 47 MGAISAMNGQSHQKKSQEEHIKRPMNAFMVWSRLQRRKIAQDNPKMHNSEISKRLG 102
>gi|54694987|gb|AAV38125.1| sox transcription factor 11 [Acipenser schrenckii]
Length = 76
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/37 (81%), Positives = 32/37 (86%)
Query: 17 HIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
H+KRPMN FMVWSQ+ERRKI E PDMHNAEISKRL
Sbjct: 2 HVKRPMNTFMVWSQIERRKIMEQWPDMHNAEISKRLG 38
>gi|40642797|emb|CAD58842.1| SoxC protein [Ciona intestinalis]
Length = 470
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/54 (57%), Positives = 40/54 (74%), Gaps = 3/54 (5%)
Query: 3 LYSPMRATKKN---NPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
L P R+++K P +IKRPMNAFM+WSQ+ERRKI E P++HNAEIS+ L
Sbjct: 126 LPPPSRSSQKKLAARPGYIKRPMNAFMIWSQIERRKIMEKTPELHNAEISRNLG 179
>gi|159144443|gb|ABW90107.1| Sox14 [Drosophila melanogaster]
Length = 71
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/35 (85%), Positives = 31/35 (88%)
Query: 19 KRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
KRPMNAFMVWSQMERRKICE PD+HNAEISK L
Sbjct: 1 KRPMNAFMVWSQMERRKICERTPDLHNAEISKELG 35
>gi|54694979|gb|AAV38121.1| sox transcription factor 4 [Oncorhynchus keta]
Length = 76
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/37 (81%), Positives = 32/37 (86%)
Query: 17 HIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
H+KRPMNAFMVWSQ+ERRKI PDMHNAEISKRL
Sbjct: 2 HVKRPMNAFMVWSQIERRKIMGQSPDMHNAEISKRLG 38
>gi|321479262|gb|EFX90218.1| hypothetical protein DAPPUDRAFT_37091 [Daphnia pulex]
Length = 93
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/42 (69%), Positives = 36/42 (85%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
KN+ +HIKRPMNAFMVWS+++RRKI + P MHN+EISKRL
Sbjct: 4 KNSEDHIKRPMNAFMVWSRLQRRKIAQDNPKMHNSEISKRLG 45
>gi|108773432|gb|ABG11742.1| SRY-box containing transcription factor 4 [Oreochromis niloticus]
Length = 75
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/36 (83%), Positives = 32/36 (88%)
Query: 18 IKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+KRPMNAFMVWSQ+ERRKI E PDMHNAEISKRL
Sbjct: 1 VKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLG 36
>gi|269101192|gb|ACZ25557.1| SRY-box containing protein B2b2 [Macrobrachium nipponense]
Length = 121
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 2/45 (4%)
Query: 11 KKNNP--NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K+N P +HIKRPMNAFMVWS+M+RRKI + P MHN+EISKRL
Sbjct: 1 KENGPKDDHIKRPMNAFMVWSRMQRRKIAQENPKMHNSEISKRLG 45
>gi|728815|sp|P40637.1|AES1_ALLMI RecName: Full=SRY-related protein AES1
gi|210904|gb|AAA48526.1| Sry-related sequence, partial [Alligator mississippiensis]
Length = 72
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/36 (83%), Positives = 32/36 (88%)
Query: 18 IKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+KRPMNAFMVWSQ+ERRKI E PDMHNAEISKRL
Sbjct: 1 VKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLG 36
>gi|37730509|gb|AAO17690.1| SOX4 protein [Alligator sinensis]
Length = 72
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/36 (83%), Positives = 32/36 (88%)
Query: 18 IKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+KRPMNAFMVWSQ+ERRKI E PDMHNAEISKRL
Sbjct: 1 VKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLG 36
>gi|728817|sp|P40639.1|AES4_ALLMI RecName: Full=SRY-related protein AES4
gi|210908|gb|AAA48528.1| Sry-related sequence, partial [Alligator mississippiensis]
Length = 72
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/36 (83%), Positives = 32/36 (88%)
Query: 18 IKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+KRPMNAFMVWSQ+ERRKI E PDMHNAEISKRL
Sbjct: 1 VKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLG 36
>gi|108773452|gb|ABG11752.1| SRY-box containing transcription factor 12 [Oreochromis
niloticus]
Length = 75
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/36 (83%), Positives = 32/36 (88%)
Query: 18 IKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+KRPMNAFMVWSQ+ERRKI E PDMHNAEISKRL
Sbjct: 1 VKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLG 36
>gi|242007461|ref|XP_002424558.1| transcription factor SOX-2, putative [Pediculus humanus corporis]
gi|212508001|gb|EEB11820.1| transcription factor SOX-2, putative [Pediculus humanus corporis]
Length = 381
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 35/43 (81%)
Query: 11 KKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
KK +HIKRPMNAFMVWS+++RRKI + P MHN+EISKRL
Sbjct: 44 KKLTEDHIKRPMNAFMVWSRLQRRKIAQENPKMHNSEISKRLG 86
>gi|195128973|ref|XP_002008933.1| GI11536 [Drosophila mojavensis]
gi|193920542|gb|EDW19409.1| GI11536 [Drosophila mojavensis]
Length = 413
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 40/62 (64%), Gaps = 10/62 (16%)
Query: 9 ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALLSLYKSNGFNW-LL 67
AT HIKRPMNAFMVWS+++RR+I + P MHN+EISKRL G W LL
Sbjct: 151 ATSPGQEGHIKRPMNAFMVWSRLQRRQIAKDNPKMHNSEISKRL---------GAEWKLL 201
Query: 68 AE 69
AE
Sbjct: 202 AE 203
>gi|359071671|ref|XP_003586854.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor SOX-12-like
[Bos taurus]
Length = 619
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/42 (73%), Positives = 32/42 (76%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPM AFMVWSQ ERRKI + PDMHNAEISKRL
Sbjct: 339 KTPSGHIKRPMXAFMVWSQHERRKIMDQWPDMHNAEISKRLG 380
>gi|340376963|ref|XP_003387000.1| PREDICTED: hypothetical protein LOC100631786 [Amphimedon
queenslandica]
gi|167859591|gb|ACA04750.1| SoxC-like [Amphimedon queenslandica]
Length = 400
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/39 (74%), Positives = 33/39 (84%)
Query: 17 HIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
HIKRPMNAFMVW+Q+ERRK+ PDMHNAEIS+RL L
Sbjct: 66 HIKRPMNAFMVWAQLERRKMTTEFPDMHNAEISRRLGKL 104
>gi|195378572|ref|XP_002048057.1| GJ11555 [Drosophila virilis]
gi|194155215|gb|EDW70399.1| GJ11555 [Drosophila virilis]
Length = 414
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 40/62 (64%), Gaps = 10/62 (16%)
Query: 9 ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALLSLYKSNGFNW-LL 67
AT HIKRPMNAFMVWS+++RR+I + P MHN+EISKRL G W LL
Sbjct: 152 ATSPGQEGHIKRPMNAFMVWSRLQRRQIAKDNPKMHNSEISKRL---------GAEWKLL 202
Query: 68 AE 69
AE
Sbjct: 203 AE 204
>gi|195427295|ref|XP_002061712.1| GK17143 [Drosophila willistoni]
gi|194157797|gb|EDW72698.1| GK17143 [Drosophila willistoni]
Length = 420
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 34/45 (75%)
Query: 9 ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
AT HIKRPMNAFMVWS+++RR+I + P MHN+EISKRL
Sbjct: 168 ATSPGQEGHIKRPMNAFMVWSRLQRRQIAKDNPKMHNSEISKRLG 212
>gi|54261783|ref|NP_998283.1| transcription factor Sox-2 [Danio rerio]
gi|82186099|sp|Q6P0E1.1|SOX2_DANRE RecName: Full=Transcription factor Sox-2
gi|34784528|gb|AAH56743.1| SRY-box containing gene 2 [Danio rerio]
gi|41351030|gb|AAH65656.1| SRY-box containing gene 2 [Danio rerio]
gi|82568656|dbj|BAE48583.1| transcription factor SOX2 [Danio rerio]
Length = 315
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/43 (65%), Positives = 36/43 (83%)
Query: 11 KKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+KN+P+ IKRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 31 QKNSPDRIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 73
>gi|849044|dbj|BAA09168.1| SOX-2 [Gallus gallus]
Length = 312
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 36/43 (83%)
Query: 11 KKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+KN+P+ +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 29 QKNSPDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 71
>gi|195494282|ref|XP_002094770.1| GE20027 [Drosophila yakuba]
gi|194180871|gb|EDW94482.1| GE20027 [Drosophila yakuba]
Length = 381
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 40/62 (64%), Gaps = 10/62 (16%)
Query: 9 ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALLSLYKSNGFNW-LL 67
AT HIKRPMNAFMVWS+++RR+I + P MHN+EISKRL G W LL
Sbjct: 133 ATSPGQEGHIKRPMNAFMVWSRLQRRQIAKDNPKMHNSEISKRL---------GAEWKLL 183
Query: 68 AE 69
AE
Sbjct: 184 AE 185
>gi|261363582|gb|ACX71866.1| Sox2, partial [Trachinotus blochii]
Length = 309
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 36/45 (80%)
Query: 9 ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
A +KN+P +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 31 ANQKNSPERVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 75
>gi|45383968|ref|NP_990519.1| transcription factor SOX-2 [Gallus gallus]
gi|224060771|ref|XP_002196639.1| PREDICTED: transcription factor SOX-2 [Taeniopygia guttata]
gi|1351090|sp|P48430.1|SOX2_CHICK RecName: Full=Transcription factor SOX-2; Short=cSox2; AltName:
Full=delta EF2a
gi|595495|gb|AAB09662.1| Sox2 transcription factor [Gallus gallus]
gi|29501192|dbj|BAC67545.1| SOX2 [Gallus gallus]
Length = 315
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 36/43 (83%)
Query: 11 KKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+KN+P+ +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 32 QKNSPDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 74
>gi|307166303|gb|EFN60485.1| Transcription factor SOX-21 [Camponotus floridanus]
Length = 386
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 34/45 (75%)
Query: 9 ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
KK HIKRPMNAFMVWS+++RRKI + P MHN+EISKRL
Sbjct: 43 GGKKVQVEHIKRPMNAFMVWSRLQRRKIAQENPKMHNSEISKRLG 87
>gi|195327522|ref|XP_002030467.1| GM24555 [Drosophila sechellia]
gi|195590206|ref|XP_002084837.1| GD12627 [Drosophila simulans]
gi|194119410|gb|EDW41453.1| GM24555 [Drosophila sechellia]
gi|194196846|gb|EDX10422.1| GD12627 [Drosophila simulans]
Length = 382
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 40/62 (64%), Gaps = 10/62 (16%)
Query: 9 ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALLSLYKSNGFNW-LL 67
AT HIKRPMNAFMVWS+++RR+I + P MHN+EISKRL G W LL
Sbjct: 133 ATSPGQEGHIKRPMNAFMVWSRLQRRQIAKDNPKMHNSEISKRL---------GAEWKLL 183
Query: 68 AE 69
AE
Sbjct: 184 AE 185
>gi|17975536|ref|NP_524066.1| dichaete, isoform A [Drosophila melanogaster]
gi|442632269|ref|NP_001261830.1| dichaete, isoform B [Drosophila melanogaster]
gi|442632271|ref|NP_001261831.1| dichaete, isoform C [Drosophila melanogaster]
gi|442632273|ref|NP_001261832.1| dichaete, isoform D [Drosophila melanogaster]
gi|3913481|sp|Q24533.1|DICH_DROME RecName: Full=SOX domain-containing protein dichaete; AltName:
Full=Protein fish-hook
gi|1359612|emb|CAA65279.1| SOX-domain protein [Drosophila melanogaster]
gi|1519713|gb|AAB49673.1| SOX HMG domain protein [Drosophila melanogaster]
gi|7294407|gb|AAF49753.1| dichaete, isoform A [Drosophila melanogaster]
gi|125660032|gb|ABN49244.1| FI01304p [Drosophila melanogaster]
gi|440215769|gb|AGB94523.1| dichaete, isoform B [Drosophila melanogaster]
gi|440215770|gb|AGB94524.1| dichaete, isoform C [Drosophila melanogaster]
gi|440215771|gb|AGB94525.1| dichaete, isoform D [Drosophila melanogaster]
Length = 382
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 40/62 (64%), Gaps = 10/62 (16%)
Query: 9 ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALLSLYKSNGFNW-LL 67
AT HIKRPMNAFMVWS+++RR+I + P MHN+EISKRL G W LL
Sbjct: 133 ATSPGQEGHIKRPMNAFMVWSRLQRRQIAKDNPKMHNSEISKRL---------GAEWKLL 183
Query: 68 AE 69
AE
Sbjct: 184 AE 185
>gi|449277639|gb|EMC85733.1| Transcription factor SOX-2, partial [Columba livia]
Length = 301
Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 36/43 (83%)
Query: 11 KKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+KN+P+ +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 32 QKNSPDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 74
>gi|194870747|ref|XP_001972713.1| GG13733 [Drosophila erecta]
gi|190654496|gb|EDV51739.1| GG13733 [Drosophila erecta]
Length = 382
Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 40/62 (64%), Gaps = 10/62 (16%)
Query: 9 ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALLSLYKSNGFNW-LL 67
AT HIKRPMNAFMVWS+++RR+I + P MHN+EISKRL G W LL
Sbjct: 133 ATSPGQEGHIKRPMNAFMVWSRLQRRQIAKDNPKMHNSEISKRL---------GAEWKLL 183
Query: 68 AE 69
AE
Sbjct: 184 AE 185
>gi|21429704|gb|AAM50530.1| AT02631p [Drosophila melanogaster]
Length = 381
Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 40/62 (64%), Gaps = 10/62 (16%)
Query: 9 ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALLSLYKSNGFNW-LL 67
AT HIKRPMNAFMVWS+++RR+I + P MHN+EISKRL G W LL
Sbjct: 132 ATSPGQEGHIKRPMNAFMVWSRLQRRQIAKDNPKMHNSEISKRL---------GAEWKLL 182
Query: 68 AE 69
AE
Sbjct: 183 AE 184
>gi|125979029|ref|XP_001353547.1| GA19209 [Drosophila pseudoobscura pseudoobscura]
gi|54642310|gb|EAL31059.1| GA19209 [Drosophila pseudoobscura pseudoobscura]
Length = 395
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 40/62 (64%), Gaps = 10/62 (16%)
Query: 9 ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALLSLYKSNGFNW-LL 67
AT HIKRPMNAFMVWS+++RR+I + P MHN+EISKRL G W LL
Sbjct: 141 ATSPGQEGHIKRPMNAFMVWSRLQRRQIAKDNPKMHNSEISKRL---------GAEWKLL 191
Query: 68 AE 69
AE
Sbjct: 192 AE 193
>gi|393909417|gb|EJD75440.1| HMG box family protein [Loa loa]
Length = 597
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/48 (64%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
Query: 6 PMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
P R K+ PNHIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 390 PARIPAKS-PNHIKRPMNAFMVWARDERRKILKACPDMHNSNISKILG 436
>gi|312075172|ref|XP_003140299.1| hypothetical protein LOAG_04714 [Loa loa]
Length = 500
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/48 (64%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
Query: 6 PMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
P R K+ PNHIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 293 PARIPAKS-PNHIKRPMNAFMVWARDERRKILKACPDMHNSNISKILG 339
>gi|328778318|ref|XP_003249473.1| PREDICTED: transcription factor SOX-2-like [Apis mellifera]
Length = 471
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 30/48 (62%), Positives = 37/48 (77%), Gaps = 1/48 (2%)
Query: 6 PMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
PM A K NN + +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 143 PMNA-KNNNIDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 189
>gi|170589301|ref|XP_001899412.1| HMG box family protein [Brugia malayi]
gi|158593625|gb|EDP32220.1| HMG box family protein [Brugia malayi]
Length = 598
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/48 (64%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
Query: 6 PMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
P R K+ PNHIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 391 PARIPAKS-PNHIKRPMNAFMVWARDERRKILKACPDMHNSNISKILG 437
>gi|213510998|ref|NP_001135190.1| Transcription factor Sox-2 [Salmo salar]
gi|209151035|gb|ACI33057.1| Transcription factor Sox-2 [Salmo salar]
Length = 315
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 36/43 (83%)
Query: 11 KKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+KN+P+ +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 31 QKNSPDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 73
>gi|195997205|ref|XP_002108471.1| hypothetical protein TRIADDRAFT_19608 [Trichoplax adhaerens]
gi|190589247|gb|EDV29269.1| hypothetical protein TRIADDRAFT_19608 [Trichoplax adhaerens]
Length = 92
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/42 (66%), Positives = 36/42 (85%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K+N +H+KRPMNAFMVWS+++RRKI + P MHN+EISKRL
Sbjct: 3 KSNSDHVKRPMNAFMVWSRVQRRKIAQENPKMHNSEISKRLG 44
>gi|307167681|gb|EFN61184.1| Putative transcription factor SOX-14 [Camponotus floridanus]
Length = 451
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/28 (100%), Positives = 28/28 (100%)
Query: 22 MNAFMVWSQMERRKICEVQPDMHNAEIS 49
MNAFMVWSQMERRKICEVQPDMHNAEIS
Sbjct: 1 MNAFMVWSQMERRKICEVQPDMHNAEIS 28
>gi|6094324|sp|P48432.2|SOX2_MOUSE RecName: Full=Transcription factor SOX-2
gi|3419873|gb|AAC31791.1| high mobility group box protein SOX2 [Mus musculus]
Length = 319
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 36/43 (83%)
Query: 11 KKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+KN+P+ +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 36 QKNSPDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 78
>gi|195161050|ref|XP_002021383.1| GL24831 [Drosophila persimilis]
gi|194118496|gb|EDW40539.1| GL24831 [Drosophila persimilis]
Length = 403
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 40/62 (64%), Gaps = 10/62 (16%)
Query: 9 ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALLSLYKSNGFNW-LL 67
AT HIKRPMNAFMVWS+++RR+I + P MHN+EISKRL G W LL
Sbjct: 141 ATSPGQEGHIKRPMNAFMVWSRLQRRQIAKDNPKMHNSEISKRL---------GAEWKLL 191
Query: 68 AE 69
AE
Sbjct: 192 AE 193
>gi|194747990|ref|XP_001956432.1| GF25204 [Drosophila ananassae]
gi|190623714|gb|EDV39238.1| GF25204 [Drosophila ananassae]
Length = 387
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 40/62 (64%), Gaps = 10/62 (16%)
Query: 9 ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALLSLYKSNGFNW-LL 67
AT HIKRPMNAFMVWS+++RR+I + P MHN+EISKRL G W LL
Sbjct: 137 ATSPGQEGHIKRPMNAFMVWSRLQRRQIAKDNPKMHNSEISKRL---------GAEWKLL 187
Query: 68 AE 69
AE
Sbjct: 188 AE 189
>gi|380815866|gb|AFE79807.1| transcription factor SOX-2 [Macaca mulatta]
Length = 319
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 36/43 (83%)
Query: 11 KKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+KN+P+ +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 36 QKNSPDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 78
>gi|291400256|ref|XP_002716497.1| PREDICTED: SRY (sex determining region Y)-box 2-like [Oryctolagus
cuniculus]
Length = 328
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 36/43 (83%)
Query: 11 KKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+KN+P+ +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 45 QKNSPDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 87
>gi|127140986|ref|NP_035573.3| transcription factor SOX-2 [Mus musculus]
gi|157821697|ref|NP_001102651.1| SRY (sex determining region Y)-box 2 [Rattus norvegicus]
gi|1209430|emb|CAA63847.1| SOX2 protein [Mus musculus]
gi|30024608|dbj|BAC75668.1| transcriptional factor SOX2 [Mus musculus]
gi|34784492|gb|AAH57574.1| Sox2 protein [Mus musculus]
gi|148703104|gb|EDL35051.1| SRY-box containing gene 2 [Mus musculus]
gi|149048707|gb|EDM01248.1| rCG41622 [Rattus norvegicus]
Length = 319
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 36/43 (83%)
Query: 11 KKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+KN+P+ +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 36 QKNSPDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 78
>gi|332818471|ref|XP_516895.3| PREDICTED: transcription factor SOX-2 [Pan troglodytes]
Length = 319
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 36/43 (83%)
Query: 11 KKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+KN+P+ +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 36 QKNSPDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 78
>gi|184240|gb|AAA35997.1| putative, partial [Homo sapiens]
Length = 327
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 36/43 (83%)
Query: 11 KKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+KN+P+ +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 44 QKNSPDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 86
>gi|28195386|ref|NP_003097.1| transcription factor SOX-2 [Homo sapiens]
gi|1351091|sp|P48431.1|SOX2_HUMAN RecName: Full=Transcription factor SOX-2
gi|15530270|gb|AAH13923.1| SRY (sex determining region Y)-box 2 [Homo sapiens]
gi|119598760|gb|EAW78354.1| SRY (sex determining region Y)-box 2 [Homo sapiens]
gi|167773497|gb|ABZ92183.1| SRY (sex determining region Y)-box 2 [synthetic construct]
gi|208968779|dbj|BAG74228.1| SRY (sex determining region Y)-box 2 [synthetic construct]
Length = 317
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 36/43 (83%)
Query: 11 KKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+KN+P+ +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 34 QKNSPDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 76
>gi|345796559|ref|XP_545216.3| PREDICTED: transcription factor SOX-2 [Canis lupus familiaris]
Length = 324
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 36/43 (83%)
Query: 11 KKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+KN+P+ +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 41 QKNSPDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 83
>gi|291045108|ref|NP_001166918.1| transcription factor SOX-2 [Felis catus]
gi|264670121|gb|ACY72345.1| sex determining region Y-box 2 [Felis catus]
Length = 321
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 36/43 (83%)
Query: 11 KKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+KN+P+ +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 38 QKNSPDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 80
>gi|219283249|ref|NP_001136412.1| transcription factor SOX-2 [Macaca mulatta]
gi|297672596|ref|XP_002814367.1| PREDICTED: transcription factor SOX-2-like [Pongo abelii]
gi|332214894|ref|XP_003256569.1| PREDICTED: transcription factor SOX-2 [Nomascus leucogenys]
gi|395855379|ref|XP_003800142.1| PREDICTED: transcription factor SOX-2 [Otolemur garnettii]
gi|217035845|gb|ACJ74395.1| sex determining region Y-box 2 [Macaca mulatta]
Length = 319
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 36/43 (83%)
Query: 11 KKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+KN+P+ +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 36 QKNSPDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 78
>gi|854182|emb|CAA83435.1| sox-2 [Homo sapiens]
Length = 321
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 36/43 (83%)
Query: 11 KKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+KN+P+ +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 38 QKNSPDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 80
>gi|157428050|ref|NP_001098933.1| transcription factor SOX-2 [Bos taurus]
gi|1711465|sp|P54231.1|SOX2_SHEEP RecName: Full=Transcription factor SOX-2
gi|1261961|emb|CAA65725.1| SOX-2 protein [Ovis aries]
gi|124829013|gb|AAI33459.1| SOX2 protein [Bos taurus]
gi|296491250|tpg|DAA33313.1| TPA: SRY (sex determining region Y)-box 2 [Bos taurus]
Length = 320
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 36/43 (83%)
Query: 11 KKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+KN+P+ +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 37 QKNSPDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 79
>gi|402860851|ref|XP_003894832.1| PREDICTED: transcription factor SOX-2-like [Papio anubis]
Length = 319
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 36/43 (83%)
Query: 11 KKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+KN+P+ +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 36 QKNSPDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 78
>gi|344282325|ref|XP_003412924.1| PREDICTED: transcription factor SOX-2-like [Loxodonta africana]
Length = 318
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 36/43 (83%)
Query: 11 KKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+KN+P+ +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 35 QKNSPDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 77
>gi|169627099|gb|ACA58281.1| sex determining region Y-box 2 [Sus scrofa]
Length = 319
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 36/43 (83%)
Query: 11 KKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+KN+P+ +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 36 QKNSPDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 78
>gi|51599125|gb|AAU08213.1| transcription factor Sox2 [Acipenser schrenckii]
Length = 303
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 36/43 (83%)
Query: 11 KKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+KN+P+ +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 31 QKNSPDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 73
>gi|345325522|ref|XP_001506984.2| PREDICTED: transcription factor SOX-2-like [Ornithorhynchus
anatinus]
Length = 374
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 36/43 (83%)
Query: 11 KKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+KN+P+ +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 91 RKNSPDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 133
>gi|373938721|gb|AEY79522.1| Sox2 [Capra hircus]
Length = 320
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 36/43 (83%)
Query: 11 KKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+KN+P+ +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 37 QKNSPDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 79
>gi|363418475|gb|AEW23225.1| sex determining region Y-box 2 [Bubalus bubalis]
Length = 321
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 36/43 (83%)
Query: 11 KKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+KN+P+ +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 38 QKNSPDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 80
>gi|395519263|ref|XP_003763770.1| PREDICTED: transcription factor SOX-14 [Sarcophilus harrisii]
Length = 355
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 36/50 (72%)
Query: 4 YSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+SP T +HIKRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 109 FSPAYGTMSKPTDHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 158
>gi|256592644|gb|ACV03425.1| sex determining region Y-box 2 [Bubalus bubalis]
gi|259023881|gb|ACV90489.1| sex-determining region Y-box 2 [Bubalus bubalis]
Length = 321
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 36/43 (83%)
Query: 11 KKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+KN+P+ +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 38 QKNSPDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 80
>gi|159144445|gb|ABW90108.1| Sox4 [Pelodiscus sinensis]
Length = 71
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/35 (85%), Positives = 31/35 (88%)
Query: 19 KRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
KRPMNAFMVWSQ+ERRKI E PDMHNAEISKRL
Sbjct: 1 KRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLG 35
>gi|334347318|ref|XP_001368820.2| PREDICTED: transcription factor SOX-2-like [Monodelphis
domestica]
Length = 348
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 36/43 (83%)
Query: 11 KKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+KN+P+ +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 43 QKNSPDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 85
>gi|363412407|gb|AEW22992.1| transcription factor SOX4 [Trachemys scripta]
Length = 71
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/35 (85%), Positives = 31/35 (88%)
Query: 19 KRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
KRPMNAFMVWSQ+ERRKI E PDMHNAEISKRL
Sbjct: 1 KRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLG 35
>gi|281339286|gb|EFB14870.1| hypothetical protein PANDA_010807 [Ailuropoda melanoleuca]
Length = 283
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/42 (64%), Positives = 35/42 (83%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
KN+P+ +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 1 KNSPDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 42
>gi|356995557|dbj|BAL14715.1| transcription factor SOX2 [Cynops pyrrhogaster]
Length = 322
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 36/45 (80%)
Query: 9 ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+ KN+P+ +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 27 GSNKNSPDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 71
>gi|211908585|gb|ACJ12602.1| sex determining region Y-box 2 [Equus caballus]
Length = 321
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 36/43 (83%)
Query: 11 KKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+KN+P+ +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 38 QKNSPDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 80
>gi|301772916|ref|XP_002921878.1| PREDICTED: transcription factor SOX-2-like [Ailuropoda
melanoleuca]
Length = 287
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/42 (64%), Positives = 35/42 (83%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
KN+P+ +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 5 KNSPDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 46
>gi|214010979|gb|ACJ61262.1| Sox2 [Epinephelus coioides]
gi|214010983|gb|ACJ61264.1| Sox2 [Epinephelus coioides]
Length = 309
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 35/43 (81%)
Query: 11 KKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+KN+P +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 33 QKNSPERVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 75
>gi|195327516|ref|XP_002030464.1| GM24557 [Drosophila sechellia]
gi|194119407|gb|EDW41450.1| GM24557 [Drosophila sechellia]
Length = 386
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 38/52 (73%)
Query: 2 GLYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
G +P + N+ +HIKRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 105 GHSNPNTGSHHNSHDHIKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLG 156
>gi|108773450|gb|ABG11751.1| SRY-box containing transcription factor 11b [Oreochromis
niloticus]
Length = 75
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/36 (80%), Positives = 32/36 (88%)
Query: 18 IKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+KRPMNAFMVWS++ERRKI E PDMHNAEISKRL
Sbjct: 1 VKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLG 36
>gi|108773448|gb|ABG11750.1| SRY-box containing transcription factor 11a [Oreochromis
niloticus]
Length = 75
Score = 65.1 bits (157), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/36 (80%), Positives = 32/36 (88%)
Query: 18 IKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+KRPMNAFMVWS++ERRKI E PDMHNAEISKRL
Sbjct: 1 VKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLG 36
>gi|410932377|ref|XP_003979570.1| PREDICTED: transcription factor SOX-2-like [Takifugu rubripes]
gi|33415916|gb|AAQ18495.1| transcription factor Sox2 [Takifugu rubripes]
Length = 322
Score = 65.1 bits (157), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 35/43 (81%)
Query: 11 KKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+KN+P +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 33 QKNSPERVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 75
>gi|348539848|ref|XP_003457401.1| PREDICTED: transcription factor SOX-2-like [Oreochromis
niloticus]
Length = 322
Score = 65.1 bits (157), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 35/43 (81%)
Query: 11 KKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+KN+P +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 33 QKNSPERVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 75
>gi|432855156|ref|XP_004068100.1| PREDICTED: transcription factor SOX-2-like [Oryzias latipes]
gi|227336632|gb|ACP21263.1| SRY-box containing gene 2 [Oryzias latipes]
Length = 322
Score = 65.1 bits (157), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 35/43 (81%)
Query: 11 KKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+KN+P +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 33 QKNSPERVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 75
>gi|339246705|ref|XP_003374986.1| SOX-1 protein [Trichinella spiralis]
gi|316971748|gb|EFV55488.1| SOX-1 protein [Trichinella spiralis]
Length = 313
Score = 65.1 bits (157), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 34/47 (72%)
Query: 7 MRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
M T + HIKRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 25 MSVTASTSAGHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 71
>gi|126723912|gb|ABO26869.1| Sox2 [Oreochromis niloticus]
gi|126723914|gb|ABO26870.1| Sox2 [Oreochromis aureus]
Length = 294
Score = 65.1 bits (157), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 35/43 (81%)
Query: 11 KKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+KN+P +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 20 QKNSPERVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 62
>gi|47206548|emb|CAF91617.1| unnamed protein product [Tetraodon nigroviridis]
Length = 322
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 35/43 (81%)
Query: 11 KKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+KN+P +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 33 QKNSPERVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 75
>gi|390474844|ref|XP_002807611.2| PREDICTED: LOW QUALITY PROTEIN: transcription factor SOX-2-like
[Callithrix jacchus]
Length = 574
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 36/43 (83%)
Query: 11 KKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+KN+P+ +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 291 QKNSPDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 333
>gi|268568634|ref|XP_002640306.1| Hypothetical protein CBG12840 [Caenorhabditis briggsae]
Length = 273
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 37/48 (77%)
Query: 6 PMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
P KK +PNH+KRPMN+FMV+SQ ER+KI QP +HNA IS++L+
Sbjct: 27 PTPYDKKKDPNHVKRPMNSFMVFSQAERKKITMAQPHLHNAVISQQLS 74
>gi|71996913|ref|NP_001024920.1| Protein EGL-13, isoform c [Caenorhabditis elegans]
gi|351059388|emb|CCD74409.1| Protein EGL-13, isoform c [Caenorhabditis elegans]
Length = 422
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 33/40 (82%)
Query: 14 NPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+PNHIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 277 SPNHIKRPMNAFMVWARDERRKILKAYPDMHNSNISKILG 316
>gi|170053601|ref|XP_001862750.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167874059|gb|EDS37442.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 46
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/44 (68%), Positives = 35/44 (79%)
Query: 11 KKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLAL 54
KK HIKRPMNAFMVWS+++RRKI + P MHN+EISKRLA
Sbjct: 3 KKPAEEHIKRPMNAFMVWSRLQRRKIAQDNPKMHNSEISKRLAF 46
>gi|37730512|gb|AAO17691.1| AS48 protein [Alligator sinensis]
Length = 72
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/36 (80%), Positives = 32/36 (88%)
Query: 18 IKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+KRPMNAFMVWS++ERRKI E PDMHNAEISKRL
Sbjct: 1 VKRPMNAFMVWSRIERRKIMEQSPDMHNAEISKRLG 36
>gi|195015697|ref|XP_001984254.1| GH16344 [Drosophila grimshawi]
gi|193897736|gb|EDV96602.1| GH16344 [Drosophila grimshawi]
Length = 413
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 39/61 (63%), Gaps = 10/61 (16%)
Query: 10 TKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALLSLYKSNGFNW-LLA 68
T HIKRPMNAFMVWS+++RR+I + P MHN+EISKRL G W LLA
Sbjct: 154 TSPGQEGHIKRPMNAFMVWSRLQRRQIAKDNPKMHNSEISKRL---------GAEWKLLA 204
Query: 69 E 69
E
Sbjct: 205 E 205
>gi|363412411|gb|AEW22994.1| transcription factor SOX4 [Gekko japonicus]
Length = 71
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/35 (85%), Positives = 31/35 (88%)
Query: 19 KRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
KRPMNAFMVWSQ+ERRKI E PDMHNAEISKRL
Sbjct: 1 KRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLG 35
>gi|312371368|gb|EFR19576.1| hypothetical protein AND_22205 [Anopheles darlingi]
Length = 187
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/44 (65%), Positives = 35/44 (79%)
Query: 11 KKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLAL 54
KK HIKRPMNAFMVWS+++RRKI + P MHN+EISKRL +
Sbjct: 15 KKPAEEHIKRPMNAFMVWSRLQRRKIAQDNPKMHNSEISKRLEI 58
>gi|195494275|ref|XP_002094767.1| GE20029 [Drosophila yakuba]
gi|194180868|gb|EDW94479.1| GE20029 [Drosophila yakuba]
Length = 397
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 36/48 (75%)
Query: 6 PMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
P + N+ +HIKRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 117 PSAGSHHNSHDHIKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLG 164
>gi|426343024|ref|XP_004038119.1| PREDICTED: transcription factor SOX-2 [Gorilla gorilla gorilla]
Length = 507
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 36/43 (83%)
Query: 11 KKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+KN+P+ +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 253 QKNSPDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 295
>gi|226984|prf||1612347C Sra2 gene
Length = 98
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 36/45 (80%)
Query: 9 ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+KN+P+ +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 3 GNQKNSPDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 47
>gi|71996900|ref|NP_001024918.1| Protein EGL-13, isoform a [Caenorhabditis elegans]
gi|4218968|gb|AAD12252.1| Sox domain protein COG-2 [Caenorhabditis elegans]
gi|351059386|emb|CCD74407.1| Protein EGL-13, isoform a [Caenorhabditis elegans]
Length = 470
Score = 64.7 bits (156), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 33/40 (82%)
Query: 14 NPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+PNHIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 325 SPNHIKRPMNAFMVWARDERRKILKAYPDMHNSNISKILG 364
>gi|402594009|gb|EJW87936.1| HMG box family protein [Wuchereria bancrofti]
Length = 440
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/48 (64%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
Query: 6 PMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
P R K+ PNHIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 233 PARIPAKS-PNHIKRPMNAFMVWARDERRKILKACPDMHNSNISKILG 279
>gi|308512179|ref|XP_003118272.1| CRE-EGL-13 protein [Caenorhabditis remanei]
gi|308238918|gb|EFO82870.1| CRE-EGL-13 protein [Caenorhabditis remanei]
Length = 488
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 33/40 (82%)
Query: 14 NPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+PNHIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 329 SPNHIKRPMNAFMVWARDERRKILKAYPDMHNSNISKILG 368
>gi|351059387|emb|CCD74408.1| Protein EGL-13, isoform b [Caenorhabditis elegans]
Length = 316
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 33/40 (82%)
Query: 14 NPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+PNHIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 171 SPNHIKRPMNAFMVWARDERRKILKAYPDMHNSNISKILG 210
>gi|268579483|ref|XP_002644724.1| C. briggsae CBR-EGL-13 protein [Caenorhabditis briggsae]
Length = 482
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 33/40 (82%)
Query: 14 NPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+PNHIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 341 SPNHIKRPMNAFMVWARDERRKILKAYPDMHNSNISKILG 380
>gi|391326901|ref|XP_003737948.1| PREDICTED: uncharacterized protein LOC100900235 [Metaseiulus
occidentalis]
Length = 321
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 34/45 (75%)
Query: 9 ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+ + P+HI+RPMNAFMVWS+ +RRKI P MHN+EIS+RL
Sbjct: 133 GSSRRGPDHIRRPMNAFMVWSRAQRRKIALDNPKMHNSEISRRLG 177
>gi|196008875|ref|XP_002114303.1| hypothetical protein TRIADDRAFT_57974 [Trichoplax adhaerens]
gi|190583322|gb|EDV23393.1| hypothetical protein TRIADDRAFT_57974 [Trichoplax adhaerens]
Length = 388
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/36 (77%), Positives = 31/36 (86%)
Query: 18 IKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
IKRPMNAFMVWSQ+ER+K+ PDMHNAEISKRL
Sbjct: 41 IKRPMNAFMVWSQIERKKMSVHHPDMHNAEISKRLG 76
>gi|341874254|gb|EGT30189.1| CBN-EGL-13 protein [Caenorhabditis brenneri]
Length = 538
Score = 64.3 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 28/43 (65%), Positives = 34/43 (79%)
Query: 11 KKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+ +PNHIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 392 QAKSPNHIKRPMNAFMVWARDERRKILKAYPDMHNSNISKILG 434
>gi|241100883|ref|XP_002409776.1| sox14, putative [Ixodes scapularis]
gi|215492806|gb|EEC02447.1| sox14, putative [Ixodes scapularis]
Length = 280
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 27/42 (64%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+ +P+HIKRPMNAFMVWS+ +RRK+ P MHN+EISKRL
Sbjct: 30 RGSPDHIKRPMNAFMVWSRGQRRKMAVENPKMHNSEISKRLG 71
>gi|7508761|pir||T26043 hypothetical protein W01C8.2 - Caenorhabditis elegans
gi|351059389|emb|CCD74410.1| Protein EGL-13, isoform d [Caenorhabditis elegans]
Length = 319
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 33/40 (82%)
Query: 14 NPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+PNHIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 174 SPNHIKRPMNAFMVWARDERRKILKAYPDMHNSNISKILG 213
>gi|178056725|ref|NP_001116669.1| transcription factor SOX-2 [Sus scrofa]
gi|170293289|gb|ACB12693.1| sex determining region Y box 2 [Sus scrofa]
Length = 319
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 26/43 (60%), Positives = 36/43 (83%)
Query: 11 KKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+KN+P+ +KRPMNAFMVWS+ +RRK+ + P MHN+EIS+RL
Sbjct: 36 QKNSPDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISRRLG 78
>gi|410929820|ref|XP_003978297.1| PREDICTED: transcription factor SOX-2-like [Takifugu rubripes]
Length = 282
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 35/43 (81%)
Query: 11 KKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+KN+P +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 33 QKNSPERVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 75
>gi|442758865|gb|JAA71591.1| Putative hmg-box transcription factor [Ixodes ricinus]
Length = 279
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 27/42 (64%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+ +P+HIKRPMNAFMVWS+ +RRK+ P MHN+EISKRL
Sbjct: 30 RGSPDHIKRPMNAFMVWSRGQRRKMAVENPKMHNSEISKRLG 71
>gi|8926256|gb|AAF81765.1|AF271787_1 HMG box transcription factor AmphiSox1/2/3 [Branchiostoma
floridae]
Length = 245
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 34/40 (85%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
+H+KRPMNAFMVWS+++RRKI E P MHN+EIS+RL +
Sbjct: 20 DHVKRPMNAFMVWSRIQRRKIAEDNPKMHNSEISRRLGEM 59
>gi|389567436|gb|AFK84442.1| SRY-box containing protein 4-5, partial [Plestiodon chinensis]
Length = 72
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/35 (82%), Positives = 31/35 (88%)
Query: 19 KRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
KRPMNAF+VWSQ+ERRKI E PDMHNAEISKRL
Sbjct: 1 KRPMNAFIVWSQIERRKIMEQSPDMHNAEISKRLG 35
>gi|260794137|ref|XP_002592066.1| HMG box transcription factor protein [Branchiostoma floridae]
gi|229277280|gb|EEN48077.1| HMG box transcription factor protein [Branchiostoma floridae]
Length = 241
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 34/40 (85%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
+H+KRPMNAFMVWS+++RRKI E P MHN+EIS+RL +
Sbjct: 16 DHVKRPMNAFMVWSRIQRRKIAEDNPKMHNSEISRRLGEM 55
>gi|389567432|gb|AFK84440.1| SRY-box containing protein 4-3, partial [Plestiodon chinensis]
Length = 72
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/35 (82%), Positives = 31/35 (88%)
Query: 19 KRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
KRPMNAF+VWSQ+ERRKI E PDMHNAEISKRL
Sbjct: 1 KRPMNAFIVWSQIERRKIMEQSPDMHNAEISKRLG 35
>gi|156383753|ref|XP_001632997.1| predicted protein [Nematostella vectensis]
gi|74315425|gb|ABA02363.1| sox family protein B1 [Nematostella vectensis]
gi|156220061|gb|EDO40934.1| predicted protein [Nematostella vectensis]
Length = 343
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 42/63 (66%), Gaps = 10/63 (15%)
Query: 9 ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALLSLYKSNGFNW-LL 67
+TK N+ + +KRPMNAFMVWS+ RRK+ + P MHN+EISKRL G W LL
Sbjct: 24 STKANSADRVKRPMNAFMVWSRERRRKMAQDNPKMHNSEISKRL---------GSEWKLL 74
Query: 68 AEQ 70
+EQ
Sbjct: 75 SEQ 77
>gi|389567426|gb|AFK84437.1| SRY-box containing protein 4, partial [Plestiodon chinensis]
gi|389567428|gb|AFK84438.1| SRY-box containing protein 4-1, partial [Plestiodon chinensis]
gi|389567430|gb|AFK84439.1| SRY-box containing protein 4-2, partial [Plestiodon chinensis]
Length = 72
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/35 (82%), Positives = 31/35 (88%)
Query: 19 KRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
KRPMNAF+VWSQ+ERRKI E PDMHNAEISKRL
Sbjct: 1 KRPMNAFIVWSQIERRKIMEQSPDMHNAEISKRLG 35
>gi|389567434|gb|AFK84441.1| SRY-box containing protein 4-4, partial [Plestiodon chinensis]
Length = 72
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/35 (82%), Positives = 31/35 (88%)
Query: 19 KRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
KRPMNAF+VWSQ+ERRKI E PDMHNAEISKRL
Sbjct: 1 KRPMNAFIVWSQIERRKIMEQSPDMHNAEISKRLG 35
>gi|324506230|gb|ADY42664.1| Transcription factor Sox-6 [Ascaris suum]
Length = 584
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 33/40 (82%)
Query: 14 NPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+PNHIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 397 SPNHIKRPMNAFMVWARDERRKILKACPDMHNSNISKILG 436
>gi|391326897|ref|XP_003737946.1| PREDICTED: uncharacterized protein LOC100899948 [Metaseiulus
occidentalis]
Length = 335
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 34/45 (75%)
Query: 9 ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+ + P+HI+RPMNAFMVWS+ +RRKI P MHN+EIS+RL
Sbjct: 131 GSSRRGPDHIRRPMNAFMVWSRAQRRKIALENPKMHNSEISRRLG 175
>gi|158287886|ref|XP_001688246.1| AGAP010919-PA [Anopheles gambiae str. PEST]
gi|157019404|gb|EDO64436.1| AGAP010919-PA [Anopheles gambiae str. PEST]
Length = 330
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 33/44 (75%)
Query: 10 TKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
T HIKRPMNAFMVWS+++RR+I + P MHN+EISKRL
Sbjct: 77 TSPGQEGHIKRPMNAFMVWSRLQRRQIAKDNPKMHNSEISKRLG 120
>gi|195590200|ref|XP_002084834.1| GD12630 [Drosophila simulans]
gi|194196843|gb|EDX10419.1| GD12630 [Drosophila simulans]
Length = 385
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 36/48 (75%)
Query: 6 PMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
P + N+ +HIKRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 109 PNTGSHHNSHDHIKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLG 156
>gi|307576185|gb|ADN52690.1| SRY-box containing protein 4c, partial [Andrias davidianus]
Length = 70
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/34 (85%), Positives = 30/34 (88%)
Query: 20 RPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
RPMNAFMVWSQ+ERRKI E PDMHNAEISKRL
Sbjct: 1 RPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLG 34
>gi|160694410|gb|ABX46632.1| Sox11 [Gallus gallus]
Length = 71
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/35 (82%), Positives = 31/35 (88%)
Query: 19 KRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
KRPMNAFMVWS++ERRKI E PDMHNAEISKRL
Sbjct: 1 KRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLG 35
>gi|405958762|gb|EKC24855.1| Transcription factor SOX-2 [Crassostrea gigas]
Length = 327
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 36/52 (69%)
Query: 2 GLYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
G SP K + + +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 61 GAGSPNSGASKKDADRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 112
>gi|728811|sp|P40634.1|ADW2_ALLMI RecName: Full=SRY-related protein ADW2
gi|210898|gb|AAA48523.1| Sry-related sequence, partial [Alligator mississippiensis]
Length = 72
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/36 (80%), Positives = 31/36 (86%)
Query: 18 IKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+KRPMNAFMVWSQ ERRKI + PDMHNAEISKRL
Sbjct: 1 VKRPMNAFMVWSQHERRKIMDQWPDMHNAEISKRLG 36
>gi|442632261|ref|NP_001261827.1| Sox21a, isoform B [Drosophila melanogaster]
gi|440215766|gb|AGB94520.1| Sox21a, isoform B [Drosophila melanogaster]
Length = 407
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 35/45 (77%)
Query: 9 ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+ N+ +HIKRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 112 GSHHNSHDHIKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLG 156
>gi|124303891|gb|ABN05372.1| HMG-box protein [Carassius carassius x Cyprinus carpio]
gi|126572518|gb|ABO21641.1| HMG-box Sox11 [Carassius auratus]
gi|187403589|gb|ACD03689.1| Sox11 [triploid red crucian carp x Megalobrama amblycephala]
gi|194323367|gb|ACF49010.1| transcription factor Sox11 [Carassius carassius red var x
Cyprinus carpio]
gi|237507253|gb|ACQ99332.1| HMG-box transcription factor Sox11 [Carassius carassius red var x
Cyprinus carpio]
gi|237507263|gb|ACQ99337.1| HMG-box transcription factor Sox11 [Carassius carassius red var x
Cyprinus carpio]
gi|300217893|gb|ADJ80443.1| HMG-box transcription factor Sox11 [Megalobrama amblycephala]
gi|300217895|gb|ADJ80444.1| HMG-box transcription factor Sox11 [Xenocypris davidi]
gi|300217897|gb|ADJ80445.1| HMG-box transcription factor Sox11 [diploid Megalobrama
amblycephala x Xenocypris davidi]
gi|300217899|gb|ADJ80446.1| HMG-box transcription factor Sox11 [triploid Megalobrama
amblycephala x Xenocypris davidi]
gi|300217901|gb|ADJ80447.1| HMG-box transcription factor Sox11 [diploid Xenocypris davidi x
Megalobrama amblycephala]
Length = 71
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/35 (82%), Positives = 31/35 (88%)
Query: 19 KRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
KRPMNAFMVWS++ERRKI E PDMHNAEISKRL
Sbjct: 1 KRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLG 35
>gi|1168363|sp|P40636.2|ADW5_ALLMI RecName: Full=SRY-related protein ADW5
gi|210902|gb|AAA48525.1| Sry-related sequence, partial [Alligator mississippiensis]
Length = 72
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/36 (80%), Positives = 31/36 (86%)
Query: 18 IKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+KRPMNAFMVWSQ ERRKI + PDMHNAEISKRL
Sbjct: 1 VKRPMNAFMVWSQHERRKIMDQWPDMHNAEISKRLG 36
>gi|728812|sp|P40635.1|ADW4_ALLMI RecName: Full=SRY-related protein ADW4
gi|210900|gb|AAA48524.1| Sry-related sequence, partial [Alligator mississippiensis]
Length = 72
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/36 (80%), Positives = 31/36 (86%)
Query: 18 IKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+KRPMNAFMVWSQ ERRKI + PDMHNAEISKRL
Sbjct: 1 VKRPMNAFMVWSQHERRKIMDQWPDMHNAEISKRLG 36
>gi|159144451|gb|ABW90111.1| Sox11 [Hoplobatrachus tigerinus]
gi|159144457|gb|ABW90114.1| Sox11 [Bufo gargarizans]
gi|363412396|gb|AEW22987.1| transcription factor SOX11 [Fejervarya limnocharis]
Length = 71
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/35 (82%), Positives = 31/35 (88%)
Query: 19 KRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
KRPMNAFMVWS++ERRKI E PDMHNAEISKRL
Sbjct: 1 KRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLG 35
>gi|194323102|gb|ACF49007.1| transcription factor Sox11 [Cyprinus carpio]
Length = 71
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/35 (82%), Positives = 31/35 (88%)
Query: 19 KRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
KRPMNAFMVWS++ERRKI E PDMHNAEISKRL
Sbjct: 1 KRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLG 35
>gi|335371123|gb|AEH57090.1| SoxB2 [Bugula neritina]
Length = 199
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/41 (65%), Positives = 33/41 (80%)
Query: 13 NNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
N +HIKRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 6 NREDHIKRPMNAFMVWSRAQRRKMAQDNPKMHNSEISKRLG 46
>gi|21357779|ref|NP_648694.1| Sox21a, isoform A [Drosophila melanogaster]
gi|7294410|gb|AAF49756.1| Sox21a, isoform A [Drosophila melanogaster]
gi|66571134|gb|AAY51532.1| IP01552p [Drosophila melanogaster]
gi|220943374|gb|ACL84230.1| Sox21a-PA [synthetic construct]
gi|220953338|gb|ACL89212.1| Sox21a-PA [synthetic construct]
Length = 388
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 35/45 (77%)
Query: 9 ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+ N+ +HIKRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 112 GSHHNSHDHIKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLG 156
>gi|259013590|ref|NP_001158343.1| SRY-box containing gene 10b [Oryzias latipes]
gi|227336644|gb|ACP21269.1| SRY-box containing gene 10b [Oryzias latipes]
Length = 484
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/52 (57%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R A KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 90 PVRVNAGSKNKP-HVKRPMNAFMVWAQAARRKLADQHPHLHNAELSKTLGKL 140
>gi|185134049|ref|NP_001117742.1| SOX9 alpha2 [Oncorhynchus mykiss]
gi|12003242|gb|AAG43497.1|AF209872_1 SOX9 alpha2 [Oncorhynchus mykiss]
Length = 492
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/49 (57%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Query: 7 MRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
M + KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 98 MNGSSKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 145
>gi|159144453|gb|ABW90112.1| Sox4 [Pelophylax nigromaculatus]
Length = 71
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/35 (82%), Positives = 30/35 (85%)
Query: 19 KRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
KRPMNAFMVW Q+ERRKI E PDMHNAEISKRL
Sbjct: 1 KRPMNAFMVWPQIERRKIMEQSPDMHNAEISKRLG 35
>gi|158287882|ref|XP_001230649.2| AGAP010922-PA [Anopheles gambiae str. PEST]
gi|157019402|gb|EAU77473.2| AGAP010922-PA [Anopheles gambiae str. PEST]
Length = 109
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 34/43 (79%)
Query: 11 KKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
KK HIKRPMNAFMVWS+++RRKI + P MHN+EISKRL
Sbjct: 3 KKPAEEHIKRPMNAFMVWSRLQRRKIAQDNPKMHNSEISKRLG 45
>gi|157111610|ref|XP_001651645.1| sex-determining region y protein, sry [Aedes aegypti]
gi|108883819|gb|EAT48044.1| AAEL000893-PA [Aedes aegypti]
Length = 314
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 33/44 (75%)
Query: 10 TKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
T HIKRPMNAFMVWS+++RR+I + P MHN+EISKRL
Sbjct: 71 TSPGQDGHIKRPMNAFMVWSRLQRRQIAKDNPKMHNSEISKRLG 114
>gi|37730538|gb|AAO17700.1| PS43 protein [Pelodiscus sinensis]
Length = 72
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/36 (80%), Positives = 31/36 (86%)
Query: 18 IKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+KRPMNAFMVWSQ ERRKI + PDMHNAEISKRL
Sbjct: 1 VKRPMNAFMVWSQHERRKIMDQWPDMHNAEISKRLG 36
>gi|348511247|ref|XP_003443156.1| PREDICTED: transcription factor SOX-10-like [Oreochromis niloticus]
Length = 503
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/51 (52%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 6 PMRATK-KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + N H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 94 PVRVSSGSKNKQHVKRPMNAFMVWAQAARRKLADQHPHLHNAELSKTLGKL 144
>gi|37730542|gb|AAO17701.1| PS44 protein [Pelodiscus sinensis]
Length = 72
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/36 (80%), Positives = 31/36 (86%)
Query: 18 IKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+KRPMNAFMVWSQ ERRKI + PDMHNAEISKRL
Sbjct: 1 VKRPMNAFMVWSQHERRKIMDQWPDMHNAEISKRLG 36
>gi|341877248|gb|EGT33183.1| CBN-SOX-2 protein [Caenorhabditis brenneri]
Length = 284
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 45/72 (62%), Gaps = 12/72 (16%)
Query: 2 GLYSPMRATK--KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALLSLYK 59
G SP A K K N + +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 42 GPDSPDSAGKDGKKNDDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRL------- 94
Query: 60 SNGFNW-LLAEQ 70
G W +L+EQ
Sbjct: 95 --GTEWKMLSEQ 104
>gi|195028382|ref|XP_001987055.1| GH20178 [Drosophila grimshawi]
gi|193903055|gb|EDW01922.1| GH20178 [Drosophila grimshawi]
Length = 486
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/32 (84%), Positives = 28/32 (87%)
Query: 22 MNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
MNAFMVWSQMERRKICE PD+HNAEISK L
Sbjct: 1 MNAFMVWSQMERRKICERTPDLHNAEISKELG 32
>gi|321479261|gb|EFX90217.1| hypothetical protein DAPPUDRAFT_18307 [Daphnia pulex]
Length = 84
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/38 (71%), Positives = 33/38 (86%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+HIKRPMNAFMVWS+++RRKI + P MHN+EISKRL
Sbjct: 3 DHIKRPMNAFMVWSRLQRRKIAQDNPKMHNSEISKRLG 40
>gi|729937|sp|P40654.1|LG27_EUBMA RecName: Full=SRY-related protein LG27
gi|213175|gb|AAA92978.1| Sry-related sequence, partial [Eublepharis macularius]
Length = 71
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/36 (80%), Positives = 31/36 (86%)
Query: 18 IKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+KRPMNAFMVWSQ ERRKI + PDMHNAEISKRL
Sbjct: 1 VKRPMNAFMVWSQNERRKIMDQWPDMHNAEISKRLG 36
>gi|301628929|ref|XP_002943599.1| PREDICTED: transcription factor Sox-12-like [Xenopus (Silurana)
tropicalis]
Length = 244
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/42 (64%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K + HIKRPMNAFMVWSQ+ERRK+ + P+MHNA+IS+ L
Sbjct: 25 KTSNGHIKRPMNAFMVWSQIERRKLMSLCPNMHNADISRSLG 66
>gi|269994422|dbj|BAI50375.1| SRY-box 5 [Leiolepis reevesii rubritaeniata]
Length = 235
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R N P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 134 IYRESRGRGSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 183
>gi|410986455|ref|XP_004001551.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor SOX-13 [Felis
catus]
Length = 515
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/46 (63%), Positives = 36/46 (78%)
Query: 14 NPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALLSLYK 59
N +HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK LA L+ +
Sbjct: 421 NSSHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILASLATQR 466
>gi|729938|sp|P40655.1|LG28_EUBMA RecName: Full=SRY-related protein LG28
gi|213177|gb|AAA92979.1| Sry-related sequence, partial [Eublepharis macularius]
Length = 71
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/36 (80%), Positives = 31/36 (86%)
Query: 18 IKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+KRPMNAFMVWSQ ERRKI + PDMHNAEISKRL
Sbjct: 1 VKRPMNAFMVWSQNERRKIMDQWPDMHNAEISKRLG 36
>gi|194870738|ref|XP_001972711.1| GG13735 [Drosophila erecta]
gi|190654494|gb|EDV51737.1| GG13735 [Drosophila erecta]
Length = 403
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 35/48 (72%)
Query: 6 PMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
P N+ +HIKRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 121 PNSGGHHNSHDHIKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLG 168
>gi|74315431|gb|ABA02366.1| sox family protein F1 [Nematostella vectensis]
Length = 349
Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/47 (55%), Positives = 35/47 (74%)
Query: 8 RATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLAL 54
R K + IKRPMNAFMVW+Q+ERR++ + P++HNAE+SK L L
Sbjct: 63 RTEKDDETERIKRPMNAFMVWAQVERRRLADANPELHNAELSKMLGL 109
>gi|156392739|ref|XP_001636205.1| predicted protein [Nematostella vectensis]
gi|156223306|gb|EDO44142.1| predicted protein [Nematostella vectensis]
Length = 349
Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/47 (55%), Positives = 35/47 (74%)
Query: 8 RATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLAL 54
R K + IKRPMNAFMVW+Q+ERR++ + P++HNAE+SK L L
Sbjct: 63 RTEKDDETERIKRPMNAFMVWAQVERRRLADANPELHNAELSKMLGL 109
>gi|189069149|dbj|BAG35487.1| unnamed protein product [Homo sapiens]
Length = 317
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/43 (60%), Positives = 35/43 (81%)
Query: 11 KKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+KN+P+ +KRPMNAFMVWS+ + RK+ + P MHN+EISKRL
Sbjct: 34 QKNSPDRVKRPMNAFMVWSRGQGRKMAQENPKMHNSEISKRLG 76
>gi|730021|sp|P40651.1|MG42_TARMA RecName: Full=SRY-related protein MG42
gi|213878|gb|AAA49621.1| Sry-related sequence, partial [Tarentola mauritanica]
Length = 72
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/36 (80%), Positives = 31/36 (86%)
Query: 18 IKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+KRPMNAFMVWSQ ERRKI + PDMHNAEISKRL
Sbjct: 1 VKRPMNAFMVWSQNERRKIMDQWPDMHNAEISKRLG 36
>gi|166218470|gb|ABY85278.1| HMG-box sox protein 11 [diploid improved red crucian carp]
Length = 71
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/35 (80%), Positives = 31/35 (88%)
Query: 19 KRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
KRPMNAFMVW+++ERRKI E PDMHNAEISKRL
Sbjct: 1 KRPMNAFMVWTKIERRKIMEQSPDMHNAEISKRLG 35
>gi|343960941|dbj|BAK62060.1| transcription factor SOX-5 [Pan troglodytes]
Length = 347
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R N P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 126 IYRESRGRGSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 175
>gi|52138665|ref|NP_001004385.1| transcription factor SOX-5 [Gallus gallus]
gi|51011754|emb|CAF25289.1| transcription factor LSox5-I [Gallus gallus]
Length = 737
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R N P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 516 IYRESRGRGSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 565
>gi|1881852|gb|AAB49537.1| Sry-related HMG box gene [Homo sapiens]
Length = 347
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R N P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 126 IYRESRGRGSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 175
>gi|60826182|gb|AAX36748.1| SRY-box 5 [synthetic construct]
Length = 348
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R N P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 126 IYRESRGRGSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 175
>gi|195427299|ref|XP_002061714.1| GK17145 [Drosophila willistoni]
gi|194157799|gb|EDW72700.1| GK17145 [Drosophila willistoni]
Length = 428
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/38 (68%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+HIKRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 139 DHIKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLG 176
>gi|431908398|gb|ELK11995.1| Transcription factor SOX-5 [Pteropus alecto]
Length = 676
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R N P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 455 IYRESRGRGSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 504
>gi|397517461|ref|XP_003828929.1| PREDICTED: transcription factor SOX-5 isoform 4 [Pan paniscus]
gi|410046936|ref|XP_003952284.1| PREDICTED: transcription factor SOX-5 [Pan troglodytes]
gi|426371990|ref|XP_004052919.1| PREDICTED: transcription factor SOX-5 isoform 6 [Gorilla gorilla
gorilla]
gi|60814376|gb|AAX36298.1| SRY-box 5 [synthetic construct]
gi|61355348|gb|AAX41130.1| SRY-box 5 [synthetic construct]
gi|343961435|dbj|BAK62307.1| transcription factor SOX-5 [Pan troglodytes]
Length = 347
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R N P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 126 IYRESRGRGSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 175
>gi|326912441|ref|XP_003202559.1| PREDICTED: transcription factor SOX-5-like isoform 2 [Meleagris
gallopavo]
Length = 759
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R N P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 538 IYRESRGRGSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 587
>gi|426225350|ref|XP_004006829.1| PREDICTED: transcription factor SOX-5 isoform 3 [Ovis aries]
Length = 728
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R N P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 507 IYRESRGRGSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 556
>gi|48145543|emb|CAG32994.1| SOX5 [Homo sapiens]
Length = 347
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R N P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 126 IYRESRGRGSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 175
>gi|344241765|gb|EGV97868.1| Transcription factor SOX-5 [Cricetulus griseus]
Length = 347
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R N P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 126 IYRESRGRGSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 175
>gi|74315419|gb|ABA02360.1| sox family protein 1 [Nematostella vectensis]
Length = 240
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/38 (71%), Positives = 31/38 (81%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
H+KRPMNAFMVWS+ ERRKI + P MHN+EISKRL
Sbjct: 8 EHVKRPMNAFMVWSREERRKIAQENPKMHNSEISKRLG 45
>gi|156359418|ref|XP_001624766.1| predicted protein [Nematostella vectensis]
gi|156211565|gb|EDO32666.1| predicted protein [Nematostella vectensis]
Length = 240
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/38 (71%), Positives = 31/38 (81%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
H+KRPMNAFMVWS+ ERRKI + P MHN+EISKRL
Sbjct: 8 EHVKRPMNAFMVWSREERRKIAQENPKMHNSEISKRLG 45
>gi|449671283|ref|XP_004207461.1| PREDICTED: uncharacterized protein LOC101236863 [Hydra
magnipapillata]
Length = 442
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/38 (68%), Positives = 32/38 (84%)
Query: 17 HIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLAL 54
HIKRPMN+FMVWS+MER++I E P MHN+EISK+L
Sbjct: 11 HIKRPMNSFMVWSRMERKRISEANPKMHNSEISKQLGT 48
>gi|426225352|ref|XP_004006830.1| PREDICTED: transcription factor SOX-5 isoform 4 [Ovis aries]
Length = 642
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R N P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 421 IYRESRGRGSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 470
>gi|327272090|ref|XP_003220819.1| PREDICTED: transcription factor SOX-5-like [Anolis carolinensis]
Length = 751
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R N P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 529 IYREARGRGSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 578
>gi|343959812|dbj|BAK63763.1| transcription factor SOX-5 [Pan troglodytes]
Length = 465
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R N P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 244 IYRESRGRGSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 293
>gi|326912439|ref|XP_003202558.1| PREDICTED: transcription factor SOX-5-like isoform 1 [Meleagris
gallopavo]
Length = 750
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R N P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 529 IYRESRGRGSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 578
>gi|417404213|gb|JAA48876.1| Putative hmg-box transcription factor sox5 [Desmodus rotundus]
Length = 728
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R N P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 507 IYRESRGRGSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 556
>gi|134085763|ref|NP_001076940.1| transcription factor SOX-5 [Bos taurus]
gi|133777423|gb|AAI14659.1| SOX5 protein [Bos taurus]
gi|296487304|tpg|DAA29417.1| TPA: SRY (sex determining region Y)-box 5 [Bos taurus]
Length = 728
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R N P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 507 IYRESRGRGSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 556
>gi|126339871|ref|XP_001362305.1| PREDICTED: transcription factor SOX-5 [Monodelphis domestica]
Length = 750
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R N P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 529 IYRESRGRGSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 578
>gi|51011752|emb|CAF25288.1| transcription factor LSox5-II [Gallus gallus]
Length = 772
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R N P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 551 IYRESRGRGSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 600
>gi|395839249|ref|XP_003792509.1| PREDICTED: transcription factor SOX-5 isoform 2 [Otolemur
garnettii]
Length = 642
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R N P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 421 IYRESRGRGSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 470
>gi|380800511|gb|AFE72131.1| transcription factor SOX-5 isoform b, partial [Macaca mulatta]
Length = 674
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R N P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 453 IYRESRGRGSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 502
>gi|728816|sp|P40638.1|AES2_ALLMI RecName: Full=SRY-related protein AES2
gi|210906|gb|AAA48527.1| Sry-related sequence, partial [Alligator mississippiensis]
Length = 72
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/36 (80%), Positives = 31/36 (86%)
Query: 18 IKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+KRPMNAFMV SQ+ERRKI E PDMHNAEISKRL
Sbjct: 1 VKRPMNAFMVGSQIERRKIMEQSPDMHNAEISKRLG 36
>gi|229001906|emb|CAY12631.1| SRY-related HMG box B protein [Platynereis dumerilii]
Length = 292
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 35/45 (77%), Gaps = 1/45 (2%)
Query: 9 ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
A NN +H+KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 47 AASSNN-DHVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 90
>gi|395538488|ref|XP_003771211.1| PREDICTED: transcription factor SOX-5-like, partial [Sarcophilus
harrisii]
Length = 375
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R N P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 154 IYRESRGRGSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 203
>gi|55562892|gb|AAH86415.1| Similar to SRY (sex determining region Y)-box 5 isoform a [Rattus
norvegicus]
Length = 392
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R N P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 171 IYRESRGRGSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 220
>gi|403269165|ref|XP_003926625.1| PREDICTED: transcription factor SOX-5 isoform 3 [Saimiri
boliviensis boliviensis]
Length = 642
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R N P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 421 IYRESRGRGSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 470
>gi|242007459|ref|XP_002424557.1| predicted protein [Pediculus humanus corporis]
gi|212508000|gb|EEB11819.1| predicted protein [Pediculus humanus corporis]
Length = 264
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/41 (65%), Positives = 33/41 (80%)
Query: 13 NNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
N +HIKRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 7 NQNDHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 47
>gi|195552240|ref|XP_002076405.1| GD15457 [Drosophila simulans]
gi|194202054|gb|EDX15630.1| GD15457 [Drosophila simulans]
Length = 120
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/32 (84%), Positives = 28/32 (87%)
Query: 22 MNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
MNAFMVWSQMERRKICE PD+HNAEISK L
Sbjct: 1 MNAFMVWSQMERRKICERTPDLHNAEISKELG 32
>gi|432093866|gb|ELK25721.1| Transcription factor SOX-5, partial [Myotis davidii]
Length = 426
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R N P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 205 IYRESRGRGSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 254
>gi|417412596|gb|JAA52676.1| Putative hmg-box transcription factor sox5, partial [Desmodus
rotundus]
Length = 758
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R N P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 537 IYRESRGRGSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 586
>gi|148678721|gb|EDL10668.1| SRY-box containing gene 5, isoform CRA_a [Mus musculus]
Length = 718
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R N P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 497 IYRESRGRGSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 546
>gi|54150|emb|CAA46608.1| SOX-5 [Mus musculus]
Length = 392
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R N P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 171 IYRESRGRGSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 220
>gi|426225348|ref|XP_004006828.1| PREDICTED: transcription factor SOX-5 isoform 2 [Ovis aries]
Length = 750
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R N P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 529 IYRESRGRGSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 578
>gi|34783413|gb|AAH29220.2| SOX5 protein, partial [Homo sapiens]
gi|34783476|gb|AAH35227.1| SOX5 protein, partial [Homo sapiens]
gi|34783737|gb|AAH47665.2| SOX5 protein, partial [Homo sapiens]
Length = 376
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R N P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 155 IYRESRGRGSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 204
>gi|21758670|dbj|BAC05353.1| unnamed protein product [Homo sapiens]
gi|62898804|dbj|BAD97256.1| SRY (sex determining region Y)-box 5 isoform c variant [Homo
sapiens]
Length = 377
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R N P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 156 IYRESRGRGSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 205
>gi|401709626|dbj|BAM36486.1| SRY-box 5 [Xenopus laevis]
Length = 765
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R N P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 545 IYREARGRGSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 594
>gi|395839247|ref|XP_003792508.1| PREDICTED: transcription factor SOX-5 isoform 1 [Otolemur
garnettii]
Length = 763
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R N P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 542 IYRESRGRGSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 591
>gi|354473264|ref|XP_003498856.1| PREDICTED: transcription factor SOX-5 isoform 3 [Cricetulus
griseus]
Length = 666
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R N P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 445 IYRESRGRGSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 494
>gi|341926308|ref|NP_001230092.1| transcription factor SOX-5 isoform c [Mus musculus]
gi|3702610|emb|CAA09269.1| L-Sox5 protein [Mus musculus]
Length = 679
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R N P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 458 IYRESRGRGSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 507
>gi|23308713|ref|NP_008871.3| transcription factor SOX-5 isoform a [Homo sapiens]
gi|297261966|ref|XP_001100817.2| PREDICTED: transcription factor SOX-5 isoform 6 [Macaca mulatta]
gi|297691394|ref|XP_002823073.1| PREDICTED: transcription factor SOX-5 isoform 1 [Pongo abelii]
gi|397517455|ref|XP_003828926.1| PREDICTED: transcription factor SOX-5 isoform 1 [Pan paniscus]
gi|402885438|ref|XP_003906162.1| PREDICTED: transcription factor SOX-5 isoform 1 [Papio anubis]
gi|426371980|ref|XP_004052914.1| PREDICTED: transcription factor SOX-5 isoform 1 [Gorilla gorilla
gorilla]
gi|30179883|sp|P35711.3|SOX5_HUMAN RecName: Full=Transcription factor SOX-5
gi|23096066|dbj|BAC16234.1| L-SOX5 transcript A [Homo sapiens]
gi|119616892|gb|EAW96486.1| SRY (sex determining region Y)-box 5, isoform CRA_a [Homo sapiens]
gi|119616896|gb|EAW96490.1| SRY (sex determining region Y)-box 5, isoform CRA_a [Homo sapiens]
gi|355564082|gb|EHH20582.1| Transcription factor SOX-5 [Macaca mulatta]
gi|355785966|gb|EHH66149.1| Transcription factor SOX-5 [Macaca fascicularis]
gi|410216444|gb|JAA05441.1| SRY (sex determining region Y)-box 5 [Pan troglodytes]
gi|410337571|gb|JAA37732.1| SRY (sex determining region Y)-box 5 [Pan troglodytes]
Length = 763
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R N P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 542 IYRESRGRGSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 591
>gi|410046934|ref|XP_003952283.1| PREDICTED: transcription factor SOX-5 [Pan troglodytes]
Length = 465
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R N P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 244 IYRESRGRGSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 293
>gi|403269163|ref|XP_003926624.1| PREDICTED: transcription factor SOX-5 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 750
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R N P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 529 IYRESRGRGSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 578
>gi|308505068|ref|XP_003114717.1| hypothetical protein CRE_28162 [Caenorhabditis remanei]
gi|308258899|gb|EFP02852.1| hypothetical protein CRE_28162 [Caenorhabditis remanei]
Length = 346
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/37 (67%), Positives = 31/37 (83%)
Query: 17 HIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
HIKRP+N FMVWS++ER+K CE PD+HNA IS+ LA
Sbjct: 51 HIKRPLNVFMVWSKIERKKYCEAHPDVHNATISQTLA 87
>gi|224095642|ref|XP_002200269.1| PREDICTED: transcription factor SOX-5 [Taeniopygia guttata]
Length = 750
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R N P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 529 IYRESRGRGSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 578
>gi|149049005|gb|EDM01459.1| rCG29852, isoform CRA_b [Rattus norvegicus]
Length = 750
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R N P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 529 IYRESRGRGSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 578
>gi|410901635|ref|XP_003964301.1| PREDICTED: transcription factor SOX-10-like [Takifugu rubripes]
gi|33415946|gb|AAQ18510.1| transcription factor Sox10b [Takifugu rubripes]
Length = 495
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 36/52 (69%), Gaps = 3/52 (5%)
Query: 6 PMRATK--KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 93 PVRVNSGSKNKP-HVKRPMNAFMVWAQAARRKLADQHPHLHNAELSKTLGKL 143
>gi|387157920|ref|NP_001248343.1| transcription factor SOX-5 isoform d [Homo sapiens]
gi|109095953|ref|XP_001100277.1| PREDICTED: transcription factor SOX-5 isoform 1 [Macaca mulatta]
gi|410046932|ref|XP_003952282.1| PREDICTED: transcription factor SOX-5 [Pan troglodytes]
gi|426371988|ref|XP_004052918.1| PREDICTED: transcription factor SOX-5 isoform 5 [Gorilla gorilla
gorilla]
gi|38173780|gb|AAH60773.1| SOX5 protein [Homo sapiens]
gi|325463705|gb|ADZ15623.1| SRY (sex determining region Y)-box 5 [synthetic construct]
Length = 642
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R N P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 421 IYRESRGRGSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 470
>gi|74227605|dbj|BAE35660.1| unnamed protein product [Mus musculus]
Length = 392
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R N P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 171 IYRESRGRGSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 220
>gi|30061558|ref|NP_821078.1| transcription factor SOX-5 isoform c [Homo sapiens]
gi|332232909|ref|XP_003265645.1| PREDICTED: transcription factor SOX-5 isoform 3 [Nomascus
leucogenys]
gi|332839783|ref|XP_003313848.1| PREDICTED: transcription factor SOX-5 [Pan troglodytes]
gi|397517459|ref|XP_003828928.1| PREDICTED: transcription factor SOX-5 isoform 3 [Pan paniscus]
gi|426371986|ref|XP_004052917.1| PREDICTED: transcription factor SOX-5 isoform 4 [Gorilla gorilla
gorilla]
gi|119616894|gb|EAW96488.1| SRY (sex determining region Y)-box 5, isoform CRA_c [Homo sapiens]
Length = 377
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R N P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 156 IYRESRGRGSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 205
>gi|441669800|ref|XP_004092142.1| PREDICTED: transcription factor SOX-5 [Nomascus leucogenys]
Length = 466
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R N P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 245 IYRESRGRGSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 294
>gi|73996987|ref|XP_543762.2| PREDICTED: transcription factor SOX-5 isoform 1 [Canis lupus
familiaris]
Length = 763
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R N P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 542 IYRESRGRGSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 591
>gi|403269161|ref|XP_003926623.1| PREDICTED: transcription factor SOX-5 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 763
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R N P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 542 IYRESRGRGSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 591
>gi|391338071|ref|XP_003743385.1| PREDICTED: uncharacterized protein LOC100898556 [Metaseiulus
occidentalis]
Length = 531
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 25/46 (54%), Positives = 36/46 (78%)
Query: 8 RATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
RA+ K + + ++RPMNAFMVWS+ +RRK+ + P MHN+EIS+RL
Sbjct: 164 RASTKKDADRVRRPMNAFMVWSRGQRRKMAQENPKMHNSEISRRLG 209
>gi|348569422|ref|XP_003470497.1| PREDICTED: transcription factor SOX-5-like [Cavia porcellus]
Length = 750
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R N P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 529 IYRESRGRGSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 578
>gi|344267777|ref|XP_003405742.1| PREDICTED: transcription factor SOX-5 [Loxodonta africana]
Length = 759
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R N P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 538 IYRESRGRGSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 587
>gi|239938710|sp|P40647.2|SOX5_XENLA RecName: Full=Transcription factor Sox-5; Short=xSox-5; AltName:
Full=SRY (sex determining region Y)-box 5
Length = 757
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R N P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 545 IYREARGRGSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 594
>gi|221044818|dbj|BAH14086.1| unnamed protein product [Homo sapiens]
Length = 753
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R N P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 532 IYRESRGRGSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 581
>gi|23308715|ref|NP_694534.1| transcription factor SOX-5 isoform b [Homo sapiens]
gi|109095947|ref|XP_001100738.1| PREDICTED: transcription factor SOX-5 isoform 5 [Macaca mulatta]
gi|114645626|ref|XP_001147199.1| PREDICTED: transcription factor SOX-5 isoform 4 [Pan troglodytes]
gi|332232905|ref|XP_003265643.1| PREDICTED: transcription factor SOX-5 isoform 1 [Nomascus
leucogenys]
gi|426371982|ref|XP_004052915.1| PREDICTED: transcription factor SOX-5 isoform 2 [Gorilla gorilla
gorilla]
gi|23096064|dbj|BAC16233.1| L-SOX5 transcript B [Homo sapiens]
Length = 750
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R N P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 529 IYRESRGRGSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 578
>gi|426225346|ref|XP_004006827.1| PREDICTED: transcription factor SOX-5 isoform 1 [Ovis aries]
Length = 763
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R N P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 542 IYRESRGRGSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 591
>gi|387157922|ref|NP_001248344.1| transcription factor SOX-5 isoform e [Homo sapiens]
gi|297261968|ref|XP_001100459.2| PREDICTED: transcription factor SOX-5 isoform 3 [Macaca mulatta]
gi|297691396|ref|XP_002823074.1| PREDICTED: transcription factor SOX-5 isoform 2 [Pongo abelii]
gi|332232911|ref|XP_003265646.1| PREDICTED: transcription factor SOX-5 isoform 4 [Nomascus
leucogenys]
gi|397517457|ref|XP_003828927.1| PREDICTED: transcription factor SOX-5 isoform 2 [Pan paniscus]
gi|402885440|ref|XP_003906163.1| PREDICTED: transcription factor SOX-5 isoform 2 [Papio anubis]
gi|426371984|ref|XP_004052916.1| PREDICTED: transcription factor SOX-5 isoform 3 [Gorilla gorilla
gorilla]
Length = 753
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R N P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 532 IYRESRGRGSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 581
>gi|404247452|ref|NP_001258196.1| SRY (sex determining region Y)-box 5 [Rattus norvegicus]
Length = 763
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R N P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 542 IYRESRGRGSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 591
>gi|338725953|ref|XP_001502493.2| PREDICTED: transcription factor SOX-5 isoform 2 [Equus caballus]
Length = 778
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R N P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 557 IYRESRGRGSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 606
>gi|194211777|ref|XP_001502486.2| PREDICTED: transcription factor SOX-5 isoform 1 [Equus caballus]
Length = 763
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R N P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 542 IYRESRGRGSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 591
>gi|291392506|ref|XP_002712753.1| PREDICTED: SRY (sex determining region Y)-box 5-like [Oryctolagus
cuniculus]
Length = 764
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R N P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 543 IYRESRGRGSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 592
>gi|354473260|ref|XP_003498854.1| PREDICTED: transcription factor SOX-5 isoform 1 [Cricetulus
griseus]
Length = 763
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R N P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 542 IYRESRGRGSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 591
>gi|165932306|ref|NP_035574.2| transcription factor SOX-5 isoform a [Mus musculus]
gi|148678722|gb|EDL10669.1| SRY-box containing gene 5, isoform CRA_b [Mus musculus]
Length = 763
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R N P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 542 IYRESRGRGSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 591
>gi|30179882|sp|P35710.2|SOX5_MOUSE RecName: Full=Transcription factor SOX-5
gi|3510295|dbj|BAA32567.1| SOX5 [Mus musculus]
Length = 763
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R N P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 542 IYRESRGRGSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 591
>gi|18676887|dbj|BAB85048.1| unnamed protein product [Homo sapiens]
Length = 763
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R N P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 542 IYRGSRGRGSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 591
>gi|301758948|ref|XP_002915322.1| PREDICTED: transcription factor SOX-5-like [Ailuropoda melanoleuca]
gi|345792300|ref|XP_003433612.1| PREDICTED: transcription factor SOX-5 [Canis lupus familiaris]
Length = 750
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R N P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 529 IYRESRGRGSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 578
>gi|291290951|ref|NP_001167508.1| SRY (sex determining region Y)-box 5 [Xenopus laevis]
gi|148744500|gb|AAI42560.1| Unknown (protein for MGC:160888) [Xenopus laevis]
Length = 656
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R N P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 545 IYREARGRGSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 594
>gi|338725955|ref|XP_003365229.1| PREDICTED: transcription factor SOX-5 [Equus caballus]
Length = 750
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R N P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 529 IYRESRGRGSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 578
>gi|307576182|gb|ADN52689.1| SRY-box containing protein 4a, partial [Andrias davidianus]
Length = 70
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/34 (82%), Positives = 30/34 (88%)
Query: 20 RPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
RPMNAF+VWSQ+ERRKI E PDMHNAEISKRL
Sbjct: 1 RPMNAFIVWSQIERRKIMEQSPDMHNAEISKRLG 34
>gi|281350911|gb|EFB26495.1| hypothetical protein PANDA_003294 [Ailuropoda melanoleuca]
Length = 751
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R N P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 530 IYRESRGRGSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 579
>gi|351704765|gb|EHB07684.1| Transcription factor SOX-5 [Heterocephalus glaber]
Length = 485
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R N P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 264 IYRESRGRGSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 313
>gi|443697594|gb|ELT97997.1| hypothetical protein CAPTEDRAFT_162284, partial [Capitella
teleta]
Length = 230
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 39/56 (69%), Gaps = 10/56 (17%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALLSLYKSNGFNW-LLAEQ 70
+H+KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL G W LL+E+
Sbjct: 43 DHVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRL---------GAEWKLLSEE 89
>gi|341926306|ref|NP_001107031.2| transcription factor SOX-5 isoform b [Mus musculus]
gi|83404978|gb|AAI10479.1| Sox5 protein [Mus musculus]
Length = 715
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R N P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 494 IYRESRGRGSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 543
>gi|354473262|ref|XP_003498855.1| PREDICTED: transcription factor SOX-5 isoform 2 [Cricetulus
griseus]
Length = 715
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R N P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 494 IYRESRGRGSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 543
>gi|194747994|ref|XP_001956434.1| GF25206 [Drosophila ananassae]
gi|190623716|gb|EDV39240.1| GF25206 [Drosophila ananassae]
Length = 355
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/38 (68%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+HIKRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 119 DHIKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLG 156
>gi|185133745|ref|NP_001118016.1| SOX-LZ [Oncorhynchus mykiss]
gi|927217|dbj|BAA09617.1| SOX-LZ [Oncorhynchus mykiss]
Length = 767
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R N P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 543 VYREARGRNSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 592
>gi|301766534|ref|XP_002918684.1| PREDICTED: hypothetical protein LOC100466158 [Ailuropoda
melanoleuca]
Length = 571
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/38 (68%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+HIKRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 386 DHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 423
>gi|89242261|gb|ABD64556.1| sox4a1 [Microhyla ornata]
gi|213958587|gb|ACJ54690.1| SRY-like HMG box protein 4 [Odorrana schmackeri]
Length = 71
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/34 (82%), Positives = 30/34 (88%)
Query: 20 RPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
RPMNAF+VWSQ+ERRKI E PDMHNAEISKRL
Sbjct: 1 RPMNAFIVWSQIERRKIMEQSPDMHNAEISKRLG 34
>gi|313222274|emb|CBY39233.1| unnamed protein product [Oikopleura dioica]
Length = 198
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/46 (63%), Positives = 33/46 (71%)
Query: 8 RATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
R +KN HIKRPMNAFMVW++ ERRKI PDMHN+ ISK L
Sbjct: 123 REPRKNASEHIKRPMNAFMVWAKDERRKILTQNPDMHNSNISKILG 168
>gi|67972124|dbj|BAE02404.1| unnamed protein product [Macaca fascicularis]
Length = 242
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R N P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 21 IYRESRGRGSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 70
>gi|307192230|gb|EFN75532.1| Transcription factor SOX-2 [Harpegnathos saltator]
Length = 484
Score = 62.4 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 32/63 (50%), Positives = 42/63 (66%), Gaps = 10/63 (15%)
Query: 9 ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALLSLYKSNGFNW-LL 67
+ K +N + +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL G W LL
Sbjct: 140 SNKNSNIDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRL---------GAEWKLL 190
Query: 68 AEQ 70
+EQ
Sbjct: 191 SEQ 193
>gi|195378568|ref|XP_002048055.1| GJ11557 [Drosophila virilis]
gi|194155213|gb|EDW70397.1| GJ11557 [Drosophila virilis]
Length = 376
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/38 (68%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+HIKRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 93 DHIKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLG 130
>gi|403278876|ref|XP_003931008.1| PREDICTED: transcription factor SOX-14 [Saimiri boliviensis
boliviensis]
Length = 240
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/38 (68%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+HIKRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 6 DHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 43
>gi|221121040|ref|XP_002155748.1| PREDICTED: uncharacterized protein LOC100209449 isoform 1 [Hydra
magnipapillata]
gi|449675626|ref|XP_004208455.1| PREDICTED: uncharacterized protein LOC100209449 isoform 2 [Hydra
magnipapillata]
gi|388594930|gb|AFK74891.1| transcription factor HvSoxJ3 [Hydra vulgaris]
Length = 298
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 36/44 (81%)
Query: 10 TKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+++ P+H+KRPMNAFMVWS+ +RRK+ ++ P MHN+EISK L
Sbjct: 57 SEQKKPDHVKRPMNAFMVWSREKRRKMAQINPRMHNSEISKILG 100
>gi|89242263|gb|ABD64557.1| sox4a2 [Microhyla ornata]
Length = 71
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/34 (82%), Positives = 30/34 (88%)
Query: 20 RPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
RPMNAF+VWSQ+ERRKI E PDMHNAEISKRL
Sbjct: 1 RPMNAFIVWSQIERRKIMEQSPDMHNAEISKRLG 34
>gi|348509615|ref|XP_003442343.1| PREDICTED: transcription factor SOX-6-like isoform 1 [Oreochromis
niloticus]
Length = 764
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/43 (65%), Positives = 33/43 (76%)
Query: 11 KKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+ NN HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 549 RNNNEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 591
>gi|147904471|ref|NP_001079045.1| transcription factor Sox-12 [Xenopus laevis]
gi|82133659|sp|Q8AXQ4.1|SOX12_XENLA RecName: Full=Transcription factor Sox-12; AltName: Full=Sox-K1
protein; Short=XSox-K1; AltName: Full=Transcription
factor Sox-33; Short=xSox-33; Short=xSox33
gi|26005788|dbj|BAC41346.1| xSox-K1 ptotein [Xenopus laevis]
gi|213623402|gb|AAI69697.1| Sox-K1 protein [Xenopus laevis]
gi|213627766|gb|AAI69671.1| Sox-K1 protein [Xenopus laevis]
Length = 244
Score = 62.4 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 27/42 (64%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K + HIKRPMNAFMVWSQ+ERRK+ + P+MHNA+IS+ L
Sbjct: 25 KTSNGHIKRPMNAFMVWSQIERRKLMSLCPNMHNADISRSLG 66
>gi|443724322|gb|ELU12387.1| hypothetical protein CAPTEDRAFT_20216 [Capitella teleta]
Length = 364
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 34/41 (82%)
Query: 13 NNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
++P+ +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 110 DDPSRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 150
>gi|313247602|emb|CBY15780.1| unnamed protein product [Oikopleura dioica]
Length = 237
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/46 (63%), Positives = 33/46 (71%)
Query: 8 RATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
R +KN HIKRPMNAFMVW++ ERRKI PDMHN+ ISK L
Sbjct: 123 REPRKNASEHIKRPMNAFMVWAKDERRKILTQNPDMHNSNISKILG 168
>gi|332026759|gb|EGI66868.1| Putative transcription factor SOX-14 [Acromyrmex echinatior]
Length = 430
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/32 (84%), Positives = 28/32 (87%)
Query: 22 MNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
MNAFMVWSQM RR+ICE QPDMHNAEISK L
Sbjct: 1 MNAFMVWSQMRRREICEKQPDMHNAEISKSLG 32
>gi|17567587|ref|NP_510439.1| Protein SOX-3 [Caenorhabditis elegans]
gi|3877011|emb|CAA93665.1| Protein SOX-3 [Caenorhabditis elegans]
Length = 212
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 35/42 (83%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+N+ +H+KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 42 QNSLDHVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLG 83
>gi|71680054|gb|AAI00556.1| Sox14 protein, partial [Mus musculus]
Length = 402
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/38 (68%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+HIKRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 168 DHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 205
>gi|224059846|ref|XP_002196106.1| PREDICTED: transcription factor SOX-14 [Taeniopygia guttata]
Length = 240
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/38 (68%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+HIKRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 6 DHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 43
>gi|171544931|ref|NP_001116382.1| SOX5 longer form [Oryzias latipes]
gi|156152086|gb|ABU54323.1| SOX5 longer form [Oryzias latipes]
Length = 685
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/43 (65%), Positives = 33/43 (76%)
Query: 11 KKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+ NN HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 473 RSNNEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 515
>gi|348509619|ref|XP_003442345.1| PREDICTED: transcription factor SOX-6-like isoform 3 [Oreochromis
niloticus]
Length = 784
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/43 (65%), Positives = 33/43 (76%)
Query: 11 KKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+ NN HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 569 RNNNEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 611
>gi|191961784|ref|NP_001122130.1| transcription factor Sox-5 [Xenopus (Silurana) tropicalis]
gi|239977608|sp|B3DM43.1|SOX5_XENTR RecName: Full=Transcription factor Sox-5; AltName: Full=SRY (sex
determining region Y)-box 5
gi|189442026|gb|AAI67694.1| sox5 protein [Xenopus (Silurana) tropicalis]
Length = 753
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R N P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 543 IYRESRGRGSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 592
>gi|126325843|ref|XP_001365271.1| PREDICTED: transcription factor SOX-14-like [Monodelphis
domestica]
Length = 240
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/38 (68%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+HIKRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 6 DHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 43
>gi|53734446|gb|AAH83360.1| Sox14 protein, partial [Mus musculus]
Length = 401
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/38 (68%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+HIKRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 167 DHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 204
>gi|33416987|gb|AAH55767.1| Sox14 protein, partial [Mus musculus]
Length = 398
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/38 (68%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+HIKRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 164 DHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 201
>gi|391327129|ref|XP_003738059.1| PREDICTED: uncharacterized protein LOC100908535 [Metaseiulus
occidentalis]
Length = 294
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/38 (71%), Positives = 31/38 (81%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
NH+KRPMNAFMVWS+ +RRKI P MHN+EISKRL
Sbjct: 7 NHVKRPMNAFMVWSRAQRRKIALENPKMHNSEISKRLG 44
>gi|375300601|gb|AFA46805.1| Sox9 [Gadus morhua]
Length = 505
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 95 PVRVNGSSKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 145
>gi|297672054|ref|XP_002814130.1| PREDICTED: transcription factor SOX-14 [Pongo abelii]
Length = 240
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/38 (68%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+HIKRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 6 DHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 43
>gi|380807469|gb|AFE75610.1| transcription factor SOX-12, partial [Macaca mulatta]
Length = 85
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/35 (82%), Positives = 30/35 (85%)
Query: 19 KRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
KRPMNAFMVWSQ ERRKI + PDMHNAEISKRL
Sbjct: 1 KRPMNAFMVWSQHERRKIMDQWPDMHNAEISKRLG 35
>gi|33415924|gb|AAQ18499.1| transcription factor Sox14b [Takifugu rubripes]
Length = 237
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 26/38 (68%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+HIKRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 6 DHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 43
>gi|45382127|ref|NP_990092.1| transcription factor SOX-14 [Gallus gallus]
gi|24638225|sp|Q9W7R6.1|SOX14_CHICK RecName: Full=Transcription factor SOX-14; AltName:
Full=SRY-related protein CH60
gi|7408165|gb|AAF61300.2|AF193760_1 HMG box transcription factor SOX14 [Gallus gallus]
gi|4757357|dbj|BAA77265.1| SOX14 [Gallus gallus]
Length = 240
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/38 (68%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+HIKRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 6 DHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 43
>gi|4759162|ref|NP_004180.1| transcription factor SOX-14 [Homo sapiens]
gi|255003711|ref|NP_001157253.1| transcription factor SOX-14 [Bos taurus]
gi|302564710|ref|NP_001181586.1| transcription factor SOX-14 [Macaca mulatta]
gi|114589393|ref|XP_526317.2| PREDICTED: transcription factor SOX-14 [Pan troglodytes]
gi|291399837|ref|XP_002716514.1| PREDICTED: SRY-box 14 [Oryctolagus cuniculus]
gi|301775910|ref|XP_002923375.1| PREDICTED: transcription factor SOX-14-like [Ailuropoda
melanoleuca]
gi|332232256|ref|XP_003265321.1| PREDICTED: transcription factor SOX-14 [Nomascus leucogenys]
gi|338715125|ref|XP_003363214.1| PREDICTED: transcription factor SOX-14-like [Equus caballus]
gi|345789238|ref|XP_003433195.1| PREDICTED: transcription factor SOX-14 [Canis lupus familiaris]
gi|397503859|ref|XP_003822534.1| PREDICTED: transcription factor SOX-14 [Pan paniscus]
gi|402861464|ref|XP_003895110.1| PREDICTED: transcription factor SOX-14 [Papio anubis]
gi|410971319|ref|XP_003992117.1| PREDICTED: transcription factor SOX-14 [Felis catus]
gi|426342247|ref|XP_004037763.1| PREDICTED: transcription factor SOX-14 [Gorilla gorilla gorilla]
gi|6831689|sp|O95416.1|SOX14_HUMAN RecName: Full=Transcription factor SOX-14; AltName: Full=Protein
SOX-28
gi|47117085|sp|P61259.1|SOX14_MACFA RecName: Full=Transcription factor SOX-14
gi|8547213|gb|AAF76294.1|AF193436_1 HMG box transcription factor [Homo sapiens]
gi|4008101|gb|AAC95380.1| DNA-binding protein SOX14 [Homo sapiens]
gi|4877278|emb|CAB43111.1| Sox-14 protein [Homo sapiens]
gi|14388571|dbj|BAB60804.1| hypothetical protein [Macaca fascicularis]
gi|76825072|gb|AAI06731.1| SRY (sex determining region Y)-box 14 [Homo sapiens]
gi|76827595|gb|AAI06730.1| SRY (sex determining region Y)-box 14 [Homo sapiens]
gi|119599503|gb|EAW79097.1| SRY (sex determining region Y)-box 14 [Homo sapiens]
gi|189054297|dbj|BAG36817.1| unnamed protein product [Homo sapiens]
gi|208968777|dbj|BAG74227.1| SRY (sex determining region Y)-box 14 [synthetic construct]
gi|212551862|gb|ACJ31785.1| SOX14 [Capra hircus]
gi|212551864|gb|ACJ31786.1| SOX14 [Bos taurus]
gi|281343682|gb|EFB19266.1| hypothetical protein PANDA_012510 [Ailuropoda melanoleuca]
gi|296490984|tpg|DAA33082.1| TPA: SRY (sex determining region Y)-box 14 [Bos taurus]
gi|355560011|gb|EHH16739.1| hypothetical protein EGK_12075 [Macaca mulatta]
gi|355747032|gb|EHH51646.1| hypothetical protein EGM_11067 [Macaca fascicularis]
gi|432108437|gb|ELK33187.1| Transcription factor SOX-14 [Myotis davidii]
gi|440910849|gb|ELR60600.1| Transcription factor SOX-14 [Bos grunniens mutus]
gi|444518703|gb|ELV12331.1| Transcription factor SOX-14 [Tupaia chinensis]
Length = 240
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/38 (68%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+HIKRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 6 DHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 43
>gi|410906537|ref|XP_003966748.1| PREDICTED: transcription factor Sox-19a-like [Takifugu rubripes]
Length = 300
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 3 LYSPMRATKKNNP-NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
L SP A + +P + +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 38 LPSPKGAYAQGDPMDKVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 89
>gi|157818911|ref|NP_001100320.1| SRY (sex determining region Y)-box 14 [Rattus norvegicus]
gi|226437584|ref|NP_035570.1| transcription factor SOX-14 [Mus musculus]
gi|395832855|ref|XP_003789468.1| PREDICTED: transcription factor SOX-14 [Otolemur garnettii]
gi|19862533|sp|Q04892.2|SOX14_MOUSE RecName: Full=Transcription factor SOX-14
gi|7416987|gb|AAF62397.1|AF193437_1 HMG box transcription factor [Mus musculus]
gi|74209694|dbj|BAE23582.1| unnamed protein product [Mus musculus]
gi|148689076|gb|EDL21023.1| mCG1032756 [Mus musculus]
gi|149018788|gb|EDL77429.1| SRY-box containing gene 14 (predicted) [Rattus norvegicus]
gi|212551866|gb|ACJ31787.1| SOX14 [Rattus norvegicus]
gi|431916954|gb|ELK16710.1| Transcription factor SOX-14 [Pteropus alecto]
Length = 240
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/38 (68%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+HIKRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 6 DHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 43
>gi|348582047|ref|XP_003476788.1| PREDICTED: transcription factor SOX-14-like [Cavia porcellus]
Length = 240
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/38 (68%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+HIKRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 6 DHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 43
>gi|301627502|ref|XP_002942914.1| PREDICTED: transcription factor Sox-5-like [Xenopus (Silurana)
tropicalis]
Length = 514
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R N P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 294 IYRESRGRGSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 343
>gi|348513448|ref|XP_003444254.1| PREDICTED: transcription factor Sox-14-like [Oreochromis
niloticus]
gi|126723920|gb|ABO26873.1| Sox14 [Oreochromis niloticus]
Length = 238
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/38 (68%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+HIKRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 6 DHIKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLG 43
>gi|38649222|gb|AAH63054.1| Sox21 protein, partial [Mus musculus]
Length = 416
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+H+KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 157 DHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLG 194
>gi|7416985|gb|AAF62396.1|AF193435_1 HMG box transcription factor [Mus musculus]
Length = 235
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/38 (68%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+HIKRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 1 DHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 38
>gi|351703932|gb|EHB06851.1| Transcription factor SOX-14 [Heterocephalus glaber]
Length = 240
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/38 (68%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+HIKRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 6 DHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 43
>gi|33415920|gb|AAQ18497.1| transcription factor Sox19 [Takifugu rubripes]
Length = 299
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 3 LYSPMRATKKNNP-NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
L SP A + +P + +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 38 LPSPKGAYAQGDPMDKVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 89
>gi|70571245|dbj|BAE06707.1| transcription factor protein [Ciona intestinalis]
Length = 364
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Query: 6 PMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
P R K + NHIKRPMNAFMVW++ ERR+I + PDMHN+ ISK L
Sbjct: 240 PTRGVK-HGKNHIKRPMNAFMVWAKDERRRILQAFPDMHNSNISKILG 286
>gi|47217009|emb|CAG01637.1| unnamed protein product [Tetraodon nigroviridis]
Length = 529
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 36/52 (69%), Gaps = 3/52 (5%)
Query: 6 PMRATK--KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 93 PVRVNSGSKNKP-HVKRPMNAFMVWAQAARRKLADQHPHLHNAELSKTLGKL 143
>gi|410920730|ref|XP_003973836.1| PREDICTED: transcription factor Sox-14-like [Takifugu rubripes]
gi|33415922|gb|AAQ18498.1| transcription factor Sox14a [Takifugu rubripes]
gi|47211149|emb|CAF95441.1| unnamed protein product [Tetraodon nigroviridis]
Length = 238
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/38 (68%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+HIKRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 6 DHIKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLG 43
>gi|198422331|ref|XP_002121666.1| PREDICTED: transcription factor protein [Ciona intestinalis]
Length = 368
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Query: 6 PMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
P R K + NHIKRPMNAFMVW++ ERR+I + PDMHN+ ISK L
Sbjct: 244 PTRGVK-HGKNHIKRPMNAFMVWAKDERRRILQAFPDMHNSNISKILG 290
>gi|259013592|ref|NP_001158344.1| SRY-box containing gene 14 [Oryzias latipes]
gi|227336650|gb|ACP21272.1| SRY-box containing gene 14 [Oryzias latipes]
Length = 238
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/38 (68%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+HIKRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 6 DHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 43
>gi|348509617|ref|XP_003442344.1| PREDICTED: transcription factor SOX-6-like isoform 2 [Oreochromis
niloticus]
Length = 799
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/43 (65%), Positives = 33/43 (76%)
Query: 11 KKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+ NN HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 584 RNNNEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 626
>gi|344296664|ref|XP_003420025.1| PREDICTED: transcription factor SOX-14-like [Loxodonta africana]
Length = 240
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/38 (68%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+HIKRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 6 DHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 43
>gi|126723922|gb|ABO26874.1| Sox14 [Oreochromis aureus]
Length = 238
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/38 (68%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+HIKRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 6 DHIKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLG 43
>gi|83415106|ref|NP_001032769.1| transcription factor Sox-14 [Danio rerio]
gi|123916379|sp|Q32PP9.1|SOX14_DANRE RecName: Full=Transcription factor Sox-14
gi|79158632|gb|AAI08034.1| SRY-box containing gene 14 [Danio rerio]
Length = 238
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/38 (68%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+HIKRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 6 DHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 43
>gi|431906930|gb|ELK11050.1| Transcription factor SOX-21 [Pteropus alecto]
Length = 584
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+H+KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 314 DHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLG 351
>gi|268581711|ref|XP_002645839.1| C. briggsae CBR-SOX-3 protein [Caenorhabditis briggsae]
Length = 213
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 35/42 (83%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+N+ +H+KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 43 QNSLDHVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLG 84
>gi|242007463|ref|XP_002424559.1| transcription factor Sox-3, putative [Pediculus humanus corporis]
gi|212508002|gb|EEB11821.1| transcription factor Sox-3, putative [Pediculus humanus corporis]
Length = 261
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/37 (72%), Positives = 31/37 (83%)
Query: 17 HIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
HIKRPMNAFMVWS+++RRKI P MHN+EISKRL
Sbjct: 25 HIKRPMNAFMVWSRIQRRKIALDNPKMHNSEISKRLG 61
>gi|154147670|ref|NP_001093703.1| transcription factor Sox-14 [Xenopus (Silurana) tropicalis]
gi|239977605|sp|A4QNG3.1|SOX14_XENTR RecName: Full=Transcription factor Sox-14; AltName: Full=SRY (sex
determining region Y)-box 14
gi|138519700|gb|AAI35638.1| sox14 protein [Xenopus (Silurana) tropicalis]
gi|162417289|emb|CAP58280.1| Sox14 protein [Xenopus (Silurana) tropicalis]
Length = 239
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/38 (68%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+HIKRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 6 DHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 43
>gi|21435810|gb|AAM51629.1| SOX14 [Ornithorhynchus anatinus]
Length = 226
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/38 (68%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+HIKRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 1 DHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 38
>gi|426240181|ref|XP_004013992.1| PREDICTED: transcription factor SOX-13 [Ovis aries]
Length = 594
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 36/52 (69%)
Query: 2 GLYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
GL P + N +HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 380 GLRLPHAFPESRNSSHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILG 431
>gi|288557319|ref|NP_001165685.1| transcription factor Sox-14 [Xenopus laevis]
gi|239977604|sp|B0ZTE2.1|SOX14_XENLA RecName: Full=Transcription factor Sox-14; AltName: Full=SRY (sex
determining region Y)-box 14
gi|166836042|gb|ABY90181.1| SRY-box containing gene 14 [Xenopus laevis]
Length = 239
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/38 (68%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+HIKRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 6 DHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 43
>gi|410924812|ref|XP_003975875.1| PREDICTED: transcription factor Sox-14-like [Takifugu rubripes]
Length = 237
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/38 (68%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+HIKRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 6 DHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 43
>gi|126723924|gb|ABO26875.1| Sox14 [Oreochromis karongae]
gi|126723926|gb|ABO26876.1| Sox14 [Oreochromis mossambicus]
Length = 230
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/38 (68%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+HIKRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 6 DHIKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLG 43
>gi|77964046|gb|ABB13364.1| Sox10 [Clytia hemisphaerica]
Length = 253
Score = 62.0 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 26/41 (63%), Positives = 33/41 (80%)
Query: 13 NNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
N NH+KRPMNAFMVWS+ +RR++ + P MHN+EISKRL
Sbjct: 54 NGDNHVKRPMNAFMVWSRGKRRQMAQEHPRMHNSEISKRLG 94
>gi|357605025|gb|EHJ64439.1| putative transcription factor SOX-14 [Danaus plexippus]
Length = 224
Score = 62.0 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 27/32 (84%), Positives = 28/32 (87%)
Query: 22 MNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
MNAFMVWSQ+ERRKICE PDMHNAEISK L
Sbjct: 1 MNAFMVWSQIERRKICEQTPDMHNAEISKNLG 32
>gi|57770394|ref|NP_001009888.1| transcription factor Sox-21-B [Danio rerio]
gi|82203135|sp|Q6RVD7.1|SX21B_DANRE RecName: Full=Transcription factor Sox-21-B; AltName:
Full=SRY-box containing gene 21b
gi|44829157|gb|AAS47833.1| Sox21b [Danio rerio]
gi|63101902|gb|AAH95366.1| SRY-box containing gene 21 b [Danio rerio]
Length = 245
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+H+KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 6 DHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLG 43
>gi|47227024|emb|CAG05916.1| unnamed protein product [Tetraodon nigroviridis]
Length = 248
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+H+KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 6 DHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLG 43
>gi|328705536|ref|XP_001944245.2| PREDICTED: hypothetical protein LOC100165687 [Acyrthosiphon pisum]
Length = 553
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 26/37 (70%), Positives = 31/37 (83%)
Query: 17 HIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
HIKRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 237 HIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 273
>gi|47124871|gb|AAH69948.1| Sox14 protein, partial [Mus musculus]
Length = 365
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/38 (68%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+HIKRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 131 DHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 168
>gi|114154436|gb|ABI53374.1| transcription factor SoxB2 [Strongylocentrotus purpuratus]
Length = 270
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+H+KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 12 DHVKRPMNAFMVWSRGQRRKLAQENPKMHNSEISKRLG 49
>gi|195015705|ref|XP_001984256.1| GH16347 [Drosophila grimshawi]
gi|193897738|gb|EDV96604.1| GH16347 [Drosophila grimshawi]
Length = 377
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/38 (68%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+HIKRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 97 DHIKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLG 134
>gi|74484299|gb|ABA10785.1| Sox8 [Scyliorhinus canicula]
Length = 224
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R T KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 15 PVRINGTSKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 65
>gi|223648434|gb|ACN10975.1| Transcription factor SOX-9 [Salmo salar]
Length = 490
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 95 PVRVNGSSKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 145
>gi|85719123|dbj|BAE78525.1| sox-lz [Danio rerio]
Length = 686
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R N P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 470 VYREPRGRNSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 519
>gi|185133896|ref|NP_001117651.1| SOX9 [Oncorhynchus mykiss]
gi|2780750|dbj|BAA24365.1| SOX9 [Oncorhynchus mykiss]
Length = 488
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 27/49 (55%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Query: 7 MRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
+ + KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 98 LNGSSKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 145
>gi|410896764|ref|XP_003961869.1| PREDICTED: transcription factor Sox-21-B-like [Takifugu rubripes]
Length = 248
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+H+KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 6 DHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLG 43
>gi|126572555|gb|ABO21644.1| HMG-box Sox11 [Megalobrama amblycephala]
Length = 71
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/33 (84%), Positives = 30/33 (90%)
Query: 19 KRPMNAFMVWSQMERRKICEVQPDMHNAEISKR 51
KRPMNAFMVWS++ERRKI E PDMHNAEISKR
Sbjct: 1 KRPMNAFMVWSKIERRKIMEQSPDMHNAEISKR 33
>gi|45360120|gb|AAS59169.1| SOX21 protein [Heliocidaris erythrogramma]
gi|45360122|gb|AAS59170.1| SOX21 protein [Heliocidaris tuberculata]
Length = 267
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+H+KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 11 DHVKRPMNAFMVWSRGQRRKLAQENPKMHNSEISKRLG 48
>gi|388594919|gb|AFK74890.1| transcription factor HoSoxJ3 [Hydra oligactis]
Length = 245
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 36/44 (81%)
Query: 10 TKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+++ P+H+KRPMNAFMVWS+ +RRK+ ++ P MHN+EISK L
Sbjct: 57 SEQKKPDHVKRPMNAFMVWSREKRRKMAQINPRMHNSEISKILG 100
>gi|363743036|ref|XP_003642770.1| PREDICTED: transcription factor SOX-13 [Gallus gallus]
Length = 620
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/42 (69%), Positives = 34/42 (80%), Gaps = 1/42 (2%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+NN NHIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 417 RNN-NHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILG 457
>gi|326933667|ref|XP_003212922.1| PREDICTED: transcription factor SOX-13-like [Meleagris gallopavo]
Length = 612
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/42 (69%), Positives = 34/42 (80%), Gaps = 1/42 (2%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+NN NHIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 409 RNN-NHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILG 449
>gi|114154518|gb|ABI53415.1| transcription factor SoxB2 [Strongylocentrotus franciscanus]
gi|114154520|gb|ABI53416.1| transcription factor SoxB2 [Strongylocentrotus franciscanus]
gi|114154524|gb|ABI53418.1| transcription factor SoxB2 [Strongylocentrotus franciscanus]
gi|114154530|gb|ABI53421.1| transcription factor SoxB2 [Strongylocentrotus franciscanus]
gi|114154532|gb|ABI53422.1| transcription factor SoxB2 [Strongylocentrotus franciscanus]
gi|114154534|gb|ABI53423.1| transcription factor SoxB2 [Strongylocentrotus franciscanus]
Length = 268
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+H+KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 11 DHVKRPMNAFMVWSRGQRRKLAQENPKMHNSEISKRLG 48
>gi|114154528|gb|ABI53420.1| transcription factor SoxB2 [Strongylocentrotus franciscanus]
Length = 268
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+H+KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 11 DHVKRPMNAFMVWSRGQRRKLAQENPKMHNSEISKRLG 48
>gi|114154514|gb|ABI53413.1| transcription factor SoxB2 [Strongylocentrotus pallidus]
Length = 267
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+H+KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 12 DHVKRPMNAFMVWSRGQRRKLAQENPKMHNSEISKRLG 49
>gi|114154526|gb|ABI53419.1| transcription factor SoxB2 [Strongylocentrotus franciscanus]
Length = 268
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+H+KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 11 DHVKRPMNAFMVWSRGQRRKLAQENPKMHNSEISKRLG 48
>gi|149593014|ref|XP_001512177.1| PREDICTED: transcription factor SOX-13, partial [Ornithorhynchus
anatinus]
Length = 524
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/42 (69%), Positives = 34/42 (80%), Gaps = 1/42 (2%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+NN NHIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 412 RNN-NHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILG 452
>gi|395531170|ref|XP_003767655.1| PREDICTED: transcription factor SOX-13 [Sarcophilus harrisii]
Length = 617
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/42 (69%), Positives = 34/42 (80%), Gaps = 1/42 (2%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+NN NHIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 414 RNN-NHIKRPMNAFMVWAKDERRKILQACPDMHNSSISKILG 454
>gi|114154400|gb|ABI53356.1| transcription factor SoxB2 [Strongylocentrotus purpuratus]
Length = 270
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+H+KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 12 DHVKRPMNAFMVWSRGQRRKLAQENPKMHNSEISKRLG 49
>gi|114154416|gb|ABI53364.1| transcription factor SoxB2 [Strongylocentrotus purpuratus]
Length = 270
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+H+KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 12 DHVKRPMNAFMVWSRGQRRKLAQENPKMHNSEISKRLG 49
>gi|47215274|emb|CAF97001.1| unnamed protein product [Tetraodon nigroviridis]
Length = 495
Score = 61.6 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 91 PVRVNGSSKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 141
>gi|114154424|gb|ABI53368.1| transcription factor SoxB2 [Strongylocentrotus purpuratus]
Length = 270
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+H+KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 12 DHVKRPMNAFMVWSRGQRRKLAQENPKMHNSEISKRLG 49
>gi|363412403|gb|AEW22990.1| transcription factor SOX12 [Plestiodon elegans]
Length = 71
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/35 (82%), Positives = 30/35 (85%)
Query: 19 KRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
KRPMNAFMVWSQ ERRKI + PDMHNAEISKRL
Sbjct: 1 KRPMNAFMVWSQNERRKIMDQWPDMHNAEISKRLG 35
>gi|348519631|ref|XP_003447333.1| PREDICTED: transcription factor Sox-21-B-like [Oreochromis
niloticus]
Length = 248
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+H+KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 6 DHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLG 43
>gi|114154402|gb|ABI53357.1| transcription factor SoxB2 [Strongylocentrotus purpuratus]
gi|114154404|gb|ABI53358.1| transcription factor SoxB2 [Strongylocentrotus purpuratus]
gi|114154406|gb|ABI53359.1| transcription factor SoxB2 [Strongylocentrotus purpuratus]
gi|114154408|gb|ABI53360.1| transcription factor SoxB2 [Strongylocentrotus purpuratus]
gi|114154412|gb|ABI53362.1| transcription factor SoxB2 [Strongylocentrotus purpuratus]
gi|114154418|gb|ABI53365.1| transcription factor SoxB2 [Strongylocentrotus purpuratus]
gi|114154420|gb|ABI53366.1| transcription factor SoxB2 [Strongylocentrotus purpuratus]
gi|114154426|gb|ABI53369.1| transcription factor SoxB2 [Strongylocentrotus purpuratus]
gi|114154428|gb|ABI53370.1| transcription factor SoxB2 [Strongylocentrotus purpuratus]
gi|114154430|gb|ABI53371.1| transcription factor SoxB2 [Strongylocentrotus purpuratus]
gi|114154434|gb|ABI53373.1| transcription factor SoxB2 [Strongylocentrotus purpuratus]
Length = 270
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+H+KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 12 DHVKRPMNAFMVWSRGQRRKLAQENPKMHNSEISKRLG 49
>gi|114154410|gb|ABI53361.1| transcription factor SoxB2 [Strongylocentrotus purpuratus]
Length = 270
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+H+KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 12 DHVKRPMNAFMVWSRGQRRKLAQENPKMHNSEISKRLG 49
>gi|33415926|gb|AAQ18500.1| transcription factor Sox21 [Takifugu rubripes]
Length = 248
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+H+KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 6 DHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLG 43
>gi|114154510|gb|ABI53411.1| transcription factor SoxB2 [Strongylocentrotus pallidus]
Length = 267
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+H+KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 12 DHVKRPMNAFMVWSRGQRRKLAQENPKMHNSEISKRLG 49
>gi|172088041|ref|NP_001116481.1| transcription factor SOX-6 [Danio rerio]
gi|170786294|gb|ACB38138.1| SRY-box containing protein 6 [Danio rerio]
Length = 768
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R N P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 545 VYREPRGRNSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 594
>gi|288557317|ref|NP_001165684.1| transcription factor Sox-21 [Xenopus laevis]
gi|239977607|sp|B0ZTE1.1|SOX21_XENLA RecName: Full=Transcription factor Sox-21; AltName: Full=SRY (sex
determining region Y)-box 21
gi|166836040|gb|ABY90180.1| SRY-box containing gene 21 [Xenopus laevis]
Length = 262
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+H+KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 6 DHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLG 43
>gi|34223471|gb|AAQ62978.1| Sox9a transcription factor [Gasterosteus aculeatus]
Length = 464
Score = 61.6 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 91 PVRVNGSSKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 141
>gi|114154474|gb|ABI53393.1| transcription factor SoxB2 [Strongylocentrotus droebachiensis]
Length = 268
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+H+KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 12 DHVKRPMNAFMVWSRGQRRKLAQENPKMHNSEISKRLG 49
>gi|114154488|gb|ABI53400.1| transcription factor SoxB2 [Strongylocentrotus pallidus]
Length = 268
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+H+KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 12 DHVKRPMNAFMVWSRGQRRKLAQENPKMHNSEISKRLG 49
>gi|114154432|gb|ABI53372.1| transcription factor SoxB2 [Strongylocentrotus purpuratus]
Length = 270
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+H+KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 12 DHVKRPMNAFMVWSRGQRRKLAQENPKMHNSEISKRLG 49
>gi|114154462|gb|ABI53387.1| transcription factor SoxB2 [Strongylocentrotus droebachiensis]
gi|114154480|gb|ABI53396.1| transcription factor SoxB2 [Strongylocentrotus pallidus]
gi|114154484|gb|ABI53398.1| transcription factor SoxB2 [Strongylocentrotus pallidus]
gi|114154486|gb|ABI53399.1| transcription factor SoxB2 [Strongylocentrotus pallidus]
gi|114154490|gb|ABI53401.1| transcription factor SoxB2 [Strongylocentrotus pallidus]
gi|114154492|gb|ABI53402.1| transcription factor SoxB2 [Strongylocentrotus pallidus]
gi|114154494|gb|ABI53403.1| transcription factor SoxB2 [Strongylocentrotus pallidus]
gi|114154496|gb|ABI53404.1| transcription factor SoxB2 [Strongylocentrotus pallidus]
gi|114154500|gb|ABI53406.1| transcription factor SoxB2 [Strongylocentrotus pallidus]
gi|114154502|gb|ABI53407.1| transcription factor SoxB2 [Strongylocentrotus pallidus]
gi|114154506|gb|ABI53409.1| transcription factor SoxB2 [Strongylocentrotus pallidus]
gi|114154508|gb|ABI53410.1| transcription factor SoxB2 [Strongylocentrotus pallidus]
gi|114154512|gb|ABI53412.1| transcription factor SoxB2 [Strongylocentrotus pallidus]
Length = 267
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+H+KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 12 DHVKRPMNAFMVWSRGQRRKLAQENPKMHNSEISKRLG 49
>gi|114154466|gb|ABI53389.1| transcription factor SoxB2 [Strongylocentrotus droebachiensis]
Length = 267
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+H+KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 12 DHVKRPMNAFMVWSRGQRRKLAQENPKMHNSEISKRLG 49
>gi|358414827|ref|XP_003582926.1| PREDICTED: transcription factor SOX-21-like [Bos taurus]
Length = 262
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+H+KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 6 DHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLG 43
>gi|114154422|gb|ABI53367.1| transcription factor SoxB2 [Strongylocentrotus purpuratus]
Length = 270
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+H+KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 12 DHVKRPMNAFMVWSRGQRRKLAQENPKMHNSEISKRLG 49
>gi|114154498|gb|ABI53405.1| transcription factor SoxB2 [Strongylocentrotus pallidus]
Length = 267
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+H+KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 12 DHVKRPMNAFMVWSRGQRRKLAQENPKMHNSEISKRLG 49
>gi|114154464|gb|ABI53388.1| transcription factor SoxB2 [Strongylocentrotus droebachiensis]
Length = 267
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+H+KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 12 DHVKRPMNAFMVWSRGQRRKLAQENPKMHNSEISKRLG 49
>gi|91083767|ref|XP_972019.1| PREDICTED: similar to AGAP010919-PA [Tribolium castaneum]
gi|270008129|gb|EFA04577.1| dichaete [Tribolium castaneum]
Length = 217
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/38 (71%), Positives = 31/38 (81%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
HIKRPMNAFMVWS+++RRKI P MHN+EISKRL
Sbjct: 18 GHIKRPMNAFMVWSRIQRRKIALENPKMHNSEISKRLG 55
>gi|114154472|gb|ABI53392.1| transcription factor SoxB2 [Strongylocentrotus droebachiensis]
Length = 268
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+H+KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 12 DHVKRPMNAFMVWSRGQRRKLAQENPKMHNSEISKRLG 49
>gi|730022|sp|P40652.1|MG43_TARMA RecName: Full=SRY-related protein MG43
gi|213880|gb|AAA49622.1| Sry-related sequence, partial [Tarentola mauritanica]
Length = 72
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/36 (77%), Positives = 31/36 (86%)
Query: 18 IKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+KRPMNAFMVWSQ ERRKI + PDMHNAEIS+RL
Sbjct: 1 VKRPMNAFMVWSQNERRKIMDQWPDMHNAEISERLG 36
>gi|268580121|ref|XP_002645043.1| C. briggsae CBR-SOX-2 protein [Caenorhabditis briggsae]
Length = 286
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 44/72 (61%), Gaps = 12/72 (16%)
Query: 2 GLYSPMRATK--KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALLSLYK 59
G SP K K N + +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 42 GPDSPDSTGKDGKKNDDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRL------- 94
Query: 60 SNGFNW-LLAEQ 70
G W +L+EQ
Sbjct: 95 --GTEWKMLSEQ 104
>gi|5902108|ref|NP_009015.1| transcription factor SOX-21 [Homo sapiens]
gi|302565644|ref|NP_001180661.1| transcription factor SOX-21 [Macaca mulatta]
gi|296188838|ref|XP_002742525.1| PREDICTED: transcription factor SOX-21 isoform 1 [Callithrix
jacchus]
gi|297694280|ref|XP_002824412.1| PREDICTED: transcription factor SOX-21 isoform 1 [Pongo abelii]
gi|311266448|ref|XP_003131095.1| PREDICTED: transcription factor SOX-21-like [Sus scrofa]
gi|426375782|ref|XP_004054698.1| PREDICTED: transcription factor SOX-21 [Gorilla gorilla gorilla]
gi|6831690|sp|Q9Y651.1|SOX21_HUMAN RecName: Full=Transcription factor SOX-21; AltName: Full=SOX-A
gi|4008103|gb|AAC95381.1| DNA-binding protein SOX21 [Homo sapiens]
gi|94963087|gb|AAI11585.1| SOX21 protein [synthetic construct]
gi|119629351|gb|EAX08946.1| SRY (sex determining region Y)-box 21 [Homo sapiens]
gi|208968781|dbj|BAG74229.1| SRY (sex determining region Y)-box 21 [synthetic construct]
Length = 276
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+H+KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 6 DHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLG 43
>gi|401712676|gb|AFP99071.1| SoxB1 [Ophiocoma wendtii]
Length = 336
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/43 (60%), Positives = 33/43 (76%)
Query: 11 KKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K +P +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 51 KNMDPTRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 93
>gi|317419153|emb|CBN81190.1| SOX9 [Dicentrarchus labrax]
Length = 498
Score = 61.6 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 91 PVRVNGSSKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 141
>gi|308488137|ref|XP_003106263.1| CRE-SOX-3 protein [Caenorhabditis remanei]
gi|308254253|gb|EFO98205.1| CRE-SOX-3 protein [Caenorhabditis remanei]
Length = 212
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+H+KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 46 DHVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLG 83
>gi|114154440|gb|ABI53376.1| transcription factor SoxB2 [Strongylocentrotus droebachiensis]
gi|114154442|gb|ABI53377.1| transcription factor SoxB2 [Strongylocentrotus droebachiensis]
gi|114154446|gb|ABI53379.1| transcription factor SoxB2 [Strongylocentrotus droebachiensis]
gi|114154448|gb|ABI53380.1| transcription factor SoxB2 [Strongylocentrotus droebachiensis]
gi|114154452|gb|ABI53382.1| transcription factor SoxB2 [Strongylocentrotus droebachiensis]
gi|114154454|gb|ABI53383.1| transcription factor SoxB2 [Strongylocentrotus droebachiensis]
gi|114154456|gb|ABI53384.1| transcription factor SoxB2 [Strongylocentrotus droebachiensis]
gi|114154458|gb|ABI53385.1| transcription factor SoxB2 [Strongylocentrotus droebachiensis]
gi|114154460|gb|ABI53386.1| transcription factor SoxB2 [Strongylocentrotus droebachiensis]
gi|114154470|gb|ABI53391.1| transcription factor SoxB2 [Strongylocentrotus droebachiensis]
gi|114154536|gb|ABI53424.1| transcription factor SoxB2 [Strongylocentrotus droebachiensis]
Length = 268
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+H+KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 12 DHVKRPMNAFMVWSRGQRRKLAQENPKMHNSEISKRLG 49
>gi|126337343|ref|XP_001366447.1| PREDICTED: transcription factor SOX-21-like isoform 1
[Monodelphis domestica]
Length = 275
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+H+KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 6 DHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLG 43
>gi|148228817|ref|NP_001081691.1| transcription factor Sox-2 [Xenopus laevis]
gi|6175039|sp|O42569.1|SOX2_XENLA RecName: Full=Transcription factor Sox-2; Short=XSox2;
Short=XlSox-2; AltName: Full=SRY (sex determining
region Y)-box 2
gi|2232293|gb|AAB62821.1| XlSOX-2 [Xenopus laevis]
Length = 311
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 32/39 (82%)
Query: 15 PNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
P+ +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 34 PDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 72
>gi|114154444|gb|ABI53378.1| transcription factor SoxB2 [Strongylocentrotus droebachiensis]
Length = 268
Score = 61.6 bits (148), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+H+KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 12 DHVKRPMNAFMVWSRGQRRKLAQENPKMHNSEISKRLG 49
>gi|114154516|gb|ABI53414.1| transcription factor SoxB2 [Strongylocentrotus franciscanus]
Length = 268
Score = 61.6 bits (148), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+H+KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 11 DHVKRPMNAFMVWSRGQRRKLAQENPKMHNSEISKRLG 48
>gi|114154504|gb|ABI53408.1| transcription factor SoxB2 [Strongylocentrotus pallidus]
Length = 267
Score = 61.6 bits (148), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+H+KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 12 DHVKRPMNAFMVWSRGQRRKLAQENPKMHNSEISKRLG 49
>gi|29244252|ref|NP_808421.1| transcription factor SOX-21 [Mus musculus]
gi|62901090|sp|Q811W0.1|SOX21_MOUSE RecName: Full=Transcription factor SOX-21
gi|28274770|gb|AAN60055.1| HMG-box protein SOX21 [Mus musculus]
gi|46812681|gb|AAH69176.1| SRY-box containing gene 21 [Mus musculus]
gi|223461771|gb|AAI47566.1| SRY-box containing gene 21 [Mus musculus]
gi|223461908|gb|AAI47557.1| SRY-box containing gene 21 [Mus musculus]
Length = 276
Score = 61.6 bits (148), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+H+KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 6 DHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLG 43
>gi|324518502|gb|ADY47121.1| Transcription factor Sox-14 [Ascaris suum]
Length = 279
Score = 61.6 bits (148), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+H+KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 68 SHVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLG 105
>gi|341884376|gb|EGT40311.1| CBN-SOX-3 protein [Caenorhabditis brenneri]
Length = 212
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+H+KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 46 DHVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLG 83
>gi|327271281|ref|XP_003220416.1| PREDICTED: transcription factor SOX-13-like [Anolis carolinensis]
Length = 615
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 32/40 (80%)
Query: 14 NPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
N NHIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 412 NNNHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILG 451
>gi|109121076|ref|XP_001084162.1| PREDICTED: transcription factor SOX-21-like isoform 1 [Macaca
mulatta]
Length = 254
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+H+KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 6 DHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLG 43
>gi|395833191|ref|XP_003789625.1| PREDICTED: transcription factor SOX-21 [Otolemur garnettii]
Length = 275
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+H+KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 6 DHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLG 43
>gi|47550929|ref|NP_999638.1| transcription factor SoxB2 [Strongylocentrotus purpuratus]
gi|21887050|gb|AAD40687.2|AF157388_1 transcription factor SoxB2 [Strongylocentrotus purpuratus]
Length = 270
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+H+KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 12 DHVKRPMNAFMVWSRGQRRKLAQENPKMHNSEISKRLG 49
>gi|375300603|gb|AFA46806.1| Sox9 [Gadus morhua]
Length = 508
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 98 PVRVNGSSKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 148
>gi|164682555|gb|ABY66377.1| SOX9 [Oreochromis aureus]
Length = 500
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 94 PVRVNGSTKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 144
>gi|49899011|gb|AAH76717.1| Unknown (protein for MGC:79935) [Xenopus laevis]
gi|283445050|gb|ADB20417.1| sex-determining region Y-box 2 [Xenopus laevis]
Length = 311
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 32/39 (82%)
Query: 15 PNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
P+ +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 34 PDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 72
>gi|114154468|gb|ABI53390.1| transcription factor SoxB2 [Strongylocentrotus droebachiensis]
Length = 268
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+H+KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 12 DHVKRPMNAFMVWSRGQRRKLAQENPKMHNSEISKRLG 49
>gi|83588749|gb|ABB02374.2| Sox8 [Salmo salar]
Length = 356
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMRA--TKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 87 PVRGNGSLKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 137
>gi|259013336|ref|NP_001158377.1| SRY (sex determining region Y)-box 1/2/3-like [Saccoglossus
kowalevskii]
gi|32307765|gb|AAP79279.1| sox1/2/3 [Saccoglossus kowalevskii]
Length = 316
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 9 ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
A K P+ +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 31 ANKMLGPDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 75
>gi|308512313|ref|XP_003118339.1| CRE-SOX-2 protein [Caenorhabditis remanei]
gi|308238985|gb|EFO82937.1| CRE-SOX-2 protein [Caenorhabditis remanei]
Length = 282
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 44/72 (61%), Gaps = 12/72 (16%)
Query: 2 GLYSPMRATK--KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALLSLYK 59
G SP K K N + +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 42 GPDSPDSTGKDGKKNDDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRL------- 94
Query: 60 SNGFNW-LLAEQ 70
G W +L+EQ
Sbjct: 95 --GTEWKMLSEQ 104
>gi|170577174|ref|XP_001893910.1| HMG box family protein [Brugia malayi]
gi|158599793|gb|EDP37253.1| HMG box family protein [Brugia malayi]
Length = 304
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+H+KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 79 SHVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLG 116
>gi|393904267|gb|EJD73681.1| hypothetical protein LOAG_18907 [Loa loa]
Length = 301
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+H+KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 81 SHVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLG 118
>gi|426219448|ref|XP_004023528.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor SOX-14 [Ovis
aries]
Length = 404
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 27/45 (60%), Positives = 33/45 (73%)
Query: 9 ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
T +HIKRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 163 GTMSKPSDHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 207
>gi|3064136|gb|AAC14215.1| Sry-related HMG factor [Xenopus laevis]
Length = 311
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 32/39 (82%)
Query: 15 PNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
P+ +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 34 PDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 72
>gi|47497984|ref|NP_998869.1| transcription factor Sox-2 [Xenopus (Silurana) tropicalis]
gi|82185672|sp|Q6NVN0.1|SOX2_XENTR RecName: Full=Transcription factor Sox-2; AltName: Full=SRY (sex
determining region Y)-box 2
gi|45709781|gb|AAH67975.1| SRY (sex determining region Y)-box 2 [Xenopus (Silurana)
tropicalis]
gi|89268679|emb|CAJ82651.1| SRY (sex determining region Y)-box 2 [Xenopus (Silurana)
tropicalis]
Length = 311
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 32/39 (82%)
Query: 15 PNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
P+ +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 34 PDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 72
>gi|395527412|ref|XP_003765841.1| PREDICTED: transcription factor SOX-21 [Sarcophilus harrisii]
Length = 240
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+H+KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 6 DHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLG 43
>gi|392333468|ref|XP_001078360.3| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC306168
[Rattus norvegicus]
Length = 674
Score = 61.2 bits (147), Expect = 8e-08, Method: Composition-based stats.
Identities = 25/38 (65%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+H+KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 448 DHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLG 485
>gi|259013195|ref|NP_001158346.1| SRY-box containing gene 21 [Oryzias latipes]
gi|227336656|gb|ACP21275.1| SRY-box containing gene 21 [Oryzias latipes]
Length = 244
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+H+KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 6 DHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLG 43
>gi|339237773|ref|XP_003380441.1| transcription factor SOX-3 [Trichinella spiralis]
gi|316976710|gb|EFV59943.1| transcription factor SOX-3 [Trichinella spiralis]
Length = 385
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 32/39 (82%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLAL 54
+ +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL L
Sbjct: 101 DRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGL 139
>gi|193082995|ref|NP_001122329.1| HMG transcription factor SoxB2 [Ciona intestinalis]
gi|70571235|dbj|BAE06705.1| transcription factor protein [Ciona intestinalis]
Length = 318
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 31/38 (81%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
H+KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 28 GHVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 65
>gi|343962387|dbj|BAK62781.1| transcription factor SOX-5 [Pan troglodytes]
Length = 347
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R N P HI+RPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 126 IYRESRGRGSNEP-HIERPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 175
>gi|14290109|gb|AAK59255.1| HMG box transcription factor Sox9a2 [Monopterus albus]
Length = 488
Score = 61.2 bits (147), Expect = 8e-08, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 94 PVRVNGSTKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 144
>gi|25091342|sp|Q9W7R5.1|SOX21_CHICK RecName: Full=Transcription factor SOX-21
gi|4757359|dbj|BAA77266.1| SOX21 [Gallus gallus]
Length = 280
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+H+KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 6 DHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLG 43
>gi|301619907|ref|XP_002939326.1| PREDICTED: transcription factor Sox-21 [Xenopus (Silurana)
tropicalis]
Length = 271
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+H+KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 6 DHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLG 43
>gi|158292720|ref|XP_001688521.1| AGAP005183-PA [Anopheles gambiae str. PEST]
gi|157017125|gb|EDO64104.1| AGAP005183-PA [Anopheles gambiae str. PEST]
Length = 645
Score = 61.2 bits (147), Expect = 8e-08, Method: Composition-based stats.
Identities = 26/32 (81%), Positives = 27/32 (84%)
Query: 22 MNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
MN FMVWSQ+ERRKICEV PDMHNA ISK L
Sbjct: 1 MNPFMVWSQIERRKICEVTPDMHNAVISKNLG 32
>gi|50540036|ref|NP_001002483.1| transcription factor Sox-1a [Danio rerio]
gi|49904596|gb|AAH76326.1| SRY-box containing gene 1a [Danio rerio]
gi|182888730|gb|AAI64138.1| Sox1a protein [Danio rerio]
Length = 336
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Query: 2 GLYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
G P +K N + +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 22 GQTGPNSGSKANQ-DRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 72
>gi|148235331|ref|NP_001081238.1| transcription factor Sox-13 [Xenopus laevis]
gi|227809841|sp|P40649.3|SOX13_XENLA RecName: Full=Transcription factor Sox-13; AltName:
Full=Transcription factor Sox-12; Short=xSox-12;
Short=xSox12
gi|46250058|gb|AAH68647.1| XSox12 protein [Xenopus laevis]
Length = 567
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/38 (71%), Positives = 31/38 (81%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
NHIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 390 NHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILG 427
>gi|77696445|gb|ABB00901.1| SRY-related HMG-box 3 [Epinephelus coioides]
Length = 300
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 25/37 (67%), Positives = 31/37 (83%)
Query: 17 HIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
H+KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 34 HVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 70
>gi|344242654|gb|EGV98757.1| Transcription factor SOX-14 [Cricetulus griseus]
Length = 110
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/38 (68%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+HIKRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 6 DHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 43
>gi|241607603|ref|XP_002405879.1| HMG-box transcription factor, putative [Ixodes scapularis]
gi|215500694|gb|EEC10188.1| HMG-box transcription factor, putative [Ixodes scapularis]
Length = 254
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/37 (72%), Positives = 30/37 (81%)
Query: 17 HIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
HIKRPMNAFMVWS+ +RRKI P MHN+EISKRL
Sbjct: 16 HIKRPMNAFMVWSRAQRRKIALEHPKMHNSEISKRLG 52
>gi|165881950|gb|ABY71241.1| Sox9 [Acipenser baerii]
Length = 405
Score = 61.2 bits (147), Expect = 8e-08, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 15 PVRVNGSSKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 65
>gi|146747219|gb|ABQ44208.1| SRY-box containing gene 9 [Aspidoscelis inornata]
Length = 321
Score = 61.2 bits (147), Expect = 8e-08, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 14 PVRVNGSSKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 64
>gi|117307493|dbj|BAF36483.1| SRY-box 9 [Trimeresurus flavoviridis]
Length = 463
Score = 61.2 bits (147), Expect = 8e-08, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 64 PVRVNGSSKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 114
>gi|357607461|gb|EHJ65502.1| hypothetical protein KGM_19699 [Danaus plexippus]
Length = 222
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/42 (64%), Positives = 33/42 (78%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K +HIKRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 5 KQPSDHIKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLG 46
>gi|241853676|ref|XP_002415916.1| sox13, putative [Ixodes scapularis]
gi|215510130|gb|EEC19583.1| sox13, putative [Ixodes scapularis]
Length = 415
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 36/49 (73%), Gaps = 2/49 (4%)
Query: 7 MRATKKNNPN--HIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+R TKK+ HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 220 IRQTKKDPDGKPHIKRPMNAFMVWAKDERRKILKACPDMHNSNISKILG 268
>gi|326439372|emb|CBK62691.1| SOX similarity protein [Suberites domuncula]
Length = 294
Score = 61.2 bits (147), Expect = 9e-08, Method: Composition-based stats.
Identities = 24/40 (60%), Positives = 33/40 (82%)
Query: 14 NPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+P+HIKRPMNAFMVWS+ R+++ + P MHN+E+SKRL
Sbjct: 7 SPDHIKRPMNAFMVWSKQRRKELAQENPRMHNSELSKRLG 46
>gi|170040733|ref|XP_001848144.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167864327|gb|EDS27710.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 903
Score = 61.2 bits (147), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/38 (71%), Positives = 31/38 (81%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
NHIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 752 NHIKRPMNAFMVWAKDERRKILKACPDMHNSNISKILG 789
>gi|345494190|ref|XP_003427240.1| PREDICTED: transcription factor Sox-14-like [Nasonia vitripennis]
Length = 339
Score = 61.2 bits (147), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 26/38 (68%), Positives = 31/38 (81%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
HIKRPMNAFMVWS+++R+KI P MHN+EISKRL
Sbjct: 73 QHIKRPMNAFMVWSRIQRKKIALDNPKMHNSEISKRLG 110
>gi|340721033|ref|XP_003398931.1| PREDICTED: hypothetical protein LOC100647305 [Bombus terrestris]
Length = 326
Score = 61.2 bits (147), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 26/37 (70%), Positives = 31/37 (83%)
Query: 17 HIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
HIKRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 10 HIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 46
>gi|110760893|ref|XP_001121910.1| PREDICTED: hypothetical protein LOC726150 [Apis mellifera]
Length = 332
Score = 61.2 bits (147), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 26/37 (70%), Positives = 31/37 (83%)
Query: 17 HIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
HIKRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 10 HIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 46
>gi|58465464|gb|AAW78521.1| transcription factor Sox-9 [Acipenser sturio]
Length = 432
Score = 60.8 bits (146), Expect = 9e-08, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 79 PVRVNGSSKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 129
>gi|1255904|dbj|BAA09119.1| XSOX12 [Xenopus laevis]
Length = 470
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/38 (71%), Positives = 31/38 (81%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
NHIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 293 NHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILG 330
>gi|383864572|ref|XP_003707752.1| PREDICTED: uncharacterized protein LOC100879499 [Megachile
rotundata]
Length = 325
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 26/37 (70%), Positives = 31/37 (83%)
Query: 17 HIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
HIKRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 10 HIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 46
>gi|380016544|ref|XP_003692242.1| PREDICTED: uncharacterized protein LOC100872761 [Apis florea]
Length = 330
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 26/37 (70%), Positives = 31/37 (83%)
Query: 17 HIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
HIKRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 10 HIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 46
>gi|312096920|ref|XP_003148818.1| HMG box family protein [Loa loa]
Length = 211
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+H+KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 81 SHVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLG 118
>gi|350416780|ref|XP_003491099.1| PREDICTED: hypothetical protein LOC100745146 [Bombus impatiens]
Length = 326
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 26/37 (70%), Positives = 31/37 (83%)
Query: 17 HIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
HIKRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 10 HIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 46
>gi|312382712|gb|EFR28074.1| hypothetical protein AND_04418 [Anopheles darlingi]
Length = 1123
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/38 (71%), Positives = 31/38 (81%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
NHIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 987 NHIKRPMNAFMVWAKDERRKILKACPDMHNSNISKILG 1024
>gi|17979020|gb|AAL49967.1| HMG-box protein [Mus musculus]
Length = 276
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+H+KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 6 DHVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 43
>gi|194221989|ref|XP_001916463.1| PREDICTED: hypothetical protein LOC100147540 [Equus caballus]
Length = 183
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+H+KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 6 DHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLG 43
>gi|321479263|gb|EFX90219.1| hypothetical protein DAPPUDRAFT_39618 [Daphnia pulex]
Length = 86
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 33/40 (82%)
Query: 14 NPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
N +HIKRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 5 NNDHIKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLG 44
>gi|126337258|ref|XP_001364938.1| PREDICTED: transcription factor SOX-1-like [Monodelphis
domestica]
Length = 394
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 34/44 (77%)
Query: 10 TKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+ K N + +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 45 SNKANQDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 88
>gi|109940024|sp|Q6DGL6.2|SOX1A_DANRE RecName: Full=Transcription factor Sox-1a
gi|66911175|gb|AAH96992.1| SRY-box containing gene 1a [Danio rerio]
gi|82568652|dbj|BAE48581.1| transcription factor SOX1A [Danio rerio]
Length = 336
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Query: 2 GLYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
G P +K N + +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 22 GQTGPNSGSKANQ-DRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 72
>gi|327259921|ref|XP_003214784.1| PREDICTED: transcription factor SOX-6-like isoform 1 [Anolis
carolinensis]
Length = 763
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R + P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 542 VYRDARGRSSSEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 591
>gi|33415942|gb|AAQ18508.1| transcription factor Sox9b [Takifugu rubripes]
Length = 489
Score = 60.8 bits (146), Expect = 9e-08, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 91 PVRVNGSSKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 141
>gi|29242819|gb|AAO67243.1| HMG-box transcription factor Sox4b [Cyprinus carpio]
Length = 69
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/47 (68%), Positives = 34/47 (72%), Gaps = 4/47 (8%)
Query: 21 PMNAFMVWSQMERRKICEVQPDMHNAEISKRLA----LLSLYKSNGF 63
PMNAFMVWSQ+ERRKI E PDMHNAEISKRL LL Y+ F
Sbjct: 1 PMNAFMVWSQIERRKIMEQWPDMHNAEISKRLGKRWKLLPDYEKIPF 47
>gi|410895855|ref|XP_003961415.1| PREDICTED: transcription factor SOX-9-like isoform 2 [Takifugu
rubripes]
Length = 496
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 91 PVRVNGSSKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 141
>gi|206583370|gb|ACI15224.1| SoxB2 [Branchiostoma belcheri]
Length = 248
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+H+KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 6 DHVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 43
>gi|195537623|dbj|BAG67028.1| transcription factor SoxD [Lethenteron camtschaticum]
Length = 468
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 34/44 (77%)
Query: 10 TKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
++ +N HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 354 SRGSNEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 397
>gi|58129091|gb|AAW65484.1| HMG box transcription factor AmphiSox1/2/3-like [Branchiostoma
belcheri]
Length = 245
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 34/40 (85%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
+H+KRPMNAFMVWS+++RR+I E P MH++EIS+RL +
Sbjct: 20 DHVKRPMNAFMVWSRIQRRRIAEDSPKMHSSEISRRLGEM 59
>gi|195128969|ref|XP_002008931.1| GI11538 [Drosophila mojavensis]
gi|193920540|gb|EDW19407.1| GI11538 [Drosophila mojavensis]
Length = 379
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/38 (68%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+HIKRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 99 DHIKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLG 136
>gi|410895859|ref|XP_003961417.1| PREDICTED: transcription factor SOX-9-like isoform 4 [Takifugu
rubripes]
Length = 472
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 91 PVRVNGSSKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 141
>gi|410895853|ref|XP_003961414.1| PREDICTED: transcription factor SOX-9-like isoform 1 [Takifugu
rubripes]
Length = 489
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 91 PVRVNGSSKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 141
>gi|383864574|ref|XP_003707753.1| PREDICTED: SOX domain-containing protein dichaete-like [Megachile
rotundata]
Length = 206
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 33/44 (75%)
Query: 10 TKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
T + HIKRPMNAFMVWS+++R+KI P MHN+EISKRL
Sbjct: 36 TASSQEQHIKRPMNAFMVWSRIQRKKIALDNPKMHNSEISKRLG 79
>gi|260796049|ref|XP_002593017.1| hypothetical protein BRAFLDRAFT_263176 [Branchiostoma floridae]
gi|110294134|gb|ABG66528.1| SoxB2 [Branchiostoma floridae]
gi|229278241|gb|EEN49028.1| hypothetical protein BRAFLDRAFT_263176 [Branchiostoma floridae]
Length = 249
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+H+KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 6 DHVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 43
>gi|47219061|emb|CAG00200.1| unnamed protein product [Tetraodon nigroviridis]
Length = 484
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/51 (54%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 6 PMRATKKN-NPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R N N H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 91 PVRVNGSNKNKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 141
>gi|327259923|ref|XP_003214785.1| PREDICTED: transcription factor SOX-6-like isoform 2 [Anolis
carolinensis]
Length = 783
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R + P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 562 VYRDARGRSSSEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 611
>gi|261887561|gb|ACY05958.1| SRY-related HMG box protein 9a [Cynoglossus semilaevis]
Length = 486
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 91 PVRVNGSSKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 141
>gi|165881946|gb|ABY71239.1| Sox9 [Scyliorhinus canicula]
Length = 474
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 94 PVRVNGSSKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 144
>gi|114154522|gb|ABI53417.1| transcription factor SoxB2 [Strongylocentrotus franciscanus]
Length = 268
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 31/38 (81%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+H+KRPMNAFMVWS+ RRK+ + P MHN+EISKRL
Sbjct: 11 DHVKRPMNAFMVWSRGRRRKLAQENPKMHNSEISKRLG 48
>gi|157311661|ref|NP_001098555.1| transcription factor SOX9 [Oryzias latipes]
gi|21956090|dbj|BAC06353.1| SOX9 longer form [Oryzias latipes]
Length = 565
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 173 PVRVNGSTKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 223
>gi|380016546|ref|XP_003692243.1| PREDICTED: SOX domain-containing protein dichaete-like [Apis
florea]
Length = 279
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/37 (70%), Positives = 31/37 (83%)
Query: 17 HIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
HIKRPMNAFMVWS+++R+KI P MHN+EISKRL
Sbjct: 43 HIKRPMNAFMVWSRIQRKKIALENPKMHNSEISKRLG 79
>gi|351697978|gb|EHB00897.1| Transcription factor SOX-9 [Heterocephalus glaber]
Length = 507
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 92 PVRVNGSSKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 142
>gi|21727913|dbj|BAC02946.1| transcription factor SOX9 [Oryzias latipes]
gi|21727915|dbj|BAC02947.1| transcription factor SOX9 [Oryzias latipes]
gi|62082630|gb|AAX62152.1| Sry-box containing protein 9a [Oryzias latipes]
Length = 487
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 95 PVRVNGSTKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 145
>gi|62860563|gb|AAY16523.1| SRY sex determining region Y-box 9 [Coturnix japonica]
Length = 495
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 92 PVRVNGSSKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 142
>gi|410973255|ref|XP_003993069.1| PREDICTED: transcription factor SOX-6 isoform 1 [Felis catus]
Length = 841
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R+ + P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 620 VYRDARSRASSEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 669
>gi|410895857|ref|XP_003961416.1| PREDICTED: transcription factor SOX-9-like isoform 3 [Takifugu
rubripes]
Length = 454
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 91 PVRVNGSSKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 141
>gi|359071088|ref|XP_003586771.1| PREDICTED: transcription factor SOX-21-like [Bos taurus]
Length = 229
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+H+KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 31 DHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLG 68
>gi|341882743|gb|EGT38678.1| hypothetical protein CAEBREN_25722 [Caenorhabditis brenneri]
Length = 332
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/39 (69%), Positives = 31/39 (79%)
Query: 15 PNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
PNHIKRPMNAFMVW++ ERRKI + PDM+N ISK L
Sbjct: 171 PNHIKRPMNAFMVWARNERRKILKAYPDMYNCNISKILG 209
>gi|730023|sp|P40653.1|MG44_TARMA RecName: Full=SRY-related protein MG44
gi|213882|gb|AAA49623.1| Sry-related sequence, partial [Tarentola mauritanica]
Length = 72
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/36 (77%), Positives = 30/36 (83%)
Query: 18 IKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+KRPMNAFMVWSQ ERRKI + PDMHNAEISK L
Sbjct: 1 VKRPMNAFMVWSQNERRKIMDQWPDMHNAEISKSLG 36
>gi|45383572|ref|NP_989612.1| transcription factor SOX-9 [Gallus gallus]
gi|2982740|dbj|BAA25296.1| SOX9 [Gallus gallus]
Length = 494
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 92 PVRVNGSSKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 142
>gi|183986595|ref|NP_001116887.1| transcription factor Sox-6 [Xenopus (Silurana) tropicalis]
gi|239977609|sp|B1H349.1|SOX6_XENTR RecName: Full=Transcription factor Sox-6; AltName: Full=SRY (sex
determining region Y)-box 6
gi|170285010|gb|AAI61247.1| sox6 protein [Xenopus (Silurana) tropicalis]
Length = 777
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R + P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 556 VYRDTRGRSSSEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 605
>gi|124430775|ref|NP_001074465.1| transcription factor Sox-1 [Xenopus (Silurana) tropicalis]
gi|239977606|sp|A2TED3.1|SOX1_XENTR RecName: Full=Transcription factor Sox-1; AltName: Full=SRY (Sex
determining region Y)-box 1
gi|124244501|gb|ABM92339.1| sex determining region Y-box 1 [Xenopus (Silurana) tropicalis]
gi|166797007|gb|AAI59122.1| SRY (sex determining region Y)-box 1 [Xenopus (Silurana)
tropicalis]
Length = 401
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 33/42 (78%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K N + +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 31 KANQDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 72
>gi|157110332|ref|XP_001651058.1| hypothetical protein AaeL_AAEL005518 [Aedes aegypti]
gi|108878782|gb|EAT43007.1| AAEL005518-PA [Aedes aegypti]
Length = 791
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/38 (71%), Positives = 31/38 (81%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
NHIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 658 NHIKRPMNAFMVWAKDERRKILKACPDMHNSNISKILG 695
>gi|47219051|emb|CAG00190.1| unnamed protein product [Tetraodon nigroviridis]
Length = 497
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMRA--TKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 84 PVRGNGSLKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 134
>gi|281347401|gb|EFB22985.1| hypothetical protein PANDA_007191 [Ailuropoda melanoleuca]
Length = 181
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/38 (68%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+HIKRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 1 DHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 38
>gi|13435018|gb|AAK26115.1|AF309034_1 SOX6 [Homo sapiens]
Length = 808
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R + P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 587 VYRDARGRASSEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 636
>gi|350580274|ref|XP_003123008.3| PREDICTED: transcription factor SOX-6, partial [Sus scrofa]
Length = 646
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R + P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 425 VYRDARGRASSEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 474
>gi|348501035|ref|XP_003438076.1| PREDICTED: transcription factor Sox-14-like [Oreochromis
niloticus]
Length = 241
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/38 (68%), Positives = 31/38 (81%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+HIKRPMNAFMVWS+ +RRK+ P MHN+EISKRL
Sbjct: 6 DHIKRPMNAFMVWSRGQRRKMARENPKMHNSEISKRLG 43
>gi|71037389|ref|NP_201583.2| transcription factor SOX-6 isoform 2 [Homo sapiens]
gi|119588866|gb|EAW68460.1| SRY (sex determining region Y)-box 6, isoform CRA_c [Homo sapiens]
Length = 808
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R + P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 587 VYRDARGRASSEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 636
>gi|350416776|ref|XP_003491097.1| PREDICTED: SOX domain-containing protein dichaete-like [Bombus
impatiens]
Length = 311
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/37 (70%), Positives = 31/37 (83%)
Query: 17 HIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
HIKRPMNAFMVWS+++R+KI P MHN+EISKRL
Sbjct: 40 HIKRPMNAFMVWSRIQRKKIALDNPKMHNSEISKRLG 76
>gi|344246137|gb|EGW02241.1| Transcription factor SOX-13 [Cricetulus griseus]
Length = 600
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 34/44 (77%)
Query: 10 TKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
++ N +HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 394 SESRNSSHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILG 437
>gi|156554841|ref|XP_001606472.1| PREDICTED: transcription factor SOX-14-like [Nasonia vitripennis]
Length = 351
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/37 (70%), Positives = 31/37 (83%)
Query: 17 HIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
HIKRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 10 HIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 46
>gi|73988592|ref|XP_851961.1| PREDICTED: transcription factor SOX-6 isoform 2 [Canis lupus
familiaris]
Length = 841
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R+ + P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 620 VYRDARSRASSEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 669
>gi|47215961|emb|CAF96363.1| unnamed protein product [Tetraodon nigroviridis]
Length = 106
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/38 (68%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+HIKRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 6 DHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 43
>gi|410932691|ref|XP_003979726.1| PREDICTED: transcription factor Sox-9-like, partial [Takifugu
rubripes]
Length = 454
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/51 (54%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 6 PMRATKKN-NPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R N N H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 91 PVRVNGSNKNKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 141
>gi|391347171|ref|XP_003747838.1| PREDICTED: transcription factor SOX-17-like [Metaseiulus
occidentalis]
Length = 238
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 9 ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
T + H+KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 5 TTTTDEGEHVKRPMNAFMVWSRGQRRKMAQQNPKMHNSEISKRLG 49
>gi|301770265|ref|XP_002920551.1| PREDICTED: transcription factor SOX-6-like [Ailuropoda melanoleuca]
gi|281350372|gb|EFB25956.1| hypothetical protein PANDA_009287 [Ailuropoda melanoleuca]
Length = 828
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R+ + P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 607 VYRDARSRASSEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 656
>gi|296480169|tpg|DAA22284.1| TPA: SRY (sex determining region Y)-box 6-like isoform 2 [Bos
taurus]
Length = 808
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R + P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 587 VYRDARGRASSEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 636
>gi|33415954|gb|AAQ18514.1| transcription factor Sox6a [Takifugu rubripes]
Length = 804
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/46 (63%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Query: 8 RATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
R N P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 588 RGRNSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 632
>gi|432108404|gb|ELK33156.1| Transcription factor SOX-6 [Myotis davidii]
Length = 520
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R + P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 299 VYRDARGRASSEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 348
>gi|185133873|ref|NP_001118018.1| SoxP1 [Oncorhynchus mykiss]
gi|1199770|dbj|BAA11868.1| SoxP1 [Oncorhynchus mykiss]
Length = 467
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMRA--TKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 85 PVRGNGSLKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 135
>gi|300794156|ref|NP_001178347.1| transcription factor SOX-6 [Bos taurus]
gi|296480168|tpg|DAA22283.1| TPA: SRY (sex determining region Y)-box 6-like isoform 1 [Bos
taurus]
Length = 841
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R + P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 620 VYRDARGRASSEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 669
>gi|444727892|gb|ELW68370.1| Transcription factor SOX-9 [Tupaia chinensis]
Length = 509
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 92 PVRVNGSSKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 142
>gi|440905251|gb|ELR55657.1| Transcription factor SOX-6 [Bos grunniens mutus]
Length = 828
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R + P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 607 VYRDARGRASSEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 656
>gi|185135497|ref|NP_001117071.1| Sox8 [Salmo salar]
gi|83583656|gb|ABC24688.1| Sox8 [Salmo salar]
Length = 459
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMRA--TKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 87 PVRGNGSLKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 137
>gi|410973257|ref|XP_003993070.1| PREDICTED: transcription factor SOX-6 isoform 2 [Felis catus]
Length = 804
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R+ + P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 583 VYRDARSRASSEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 632
>gi|410913057|ref|XP_003970005.1| PREDICTED: transcription factor SOX-6-like [Takifugu rubripes]
Length = 761
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
++ R N P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 540 VFREARGRNSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 589
>gi|345330145|ref|XP_001511123.2| PREDICTED: transcription factor SOX-5 [Ornithorhynchus anatinus]
Length = 717
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R + P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 495 IYRESRGRGSSEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 544
>gi|194213871|ref|XP_001504997.2| PREDICTED: LOW QUALITY PROTEIN: transcription factor SOX-6 isoform
2 [Equus caballus]
Length = 808
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R + P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 587 VYRDARGRASSEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 636
>gi|149634486|ref|XP_001510842.1| PREDICTED: transcription factor SOX-6 isoform 1 [Ornithorhynchus
anatinus]
Length = 809
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R + P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 588 VYRDARGRASSEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 637
>gi|157786964|ref|NP_001099422.1| transcription factor SOX-13 [Rattus norvegicus]
gi|149058610|gb|EDM09767.1| SRY (sex determining region Y)-box 13 (predicted), isoform CRA_a
[Rattus norvegicus]
Length = 612
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 34/44 (77%)
Query: 10 TKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
++ N +HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 407 SESRNSSHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILG 450
>gi|395815336|ref|XP_003781185.1| PREDICTED: transcription factor SOX-6 isoform 3 [Otolemur
garnettii]
Length = 808
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R + P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 587 VYRDARGRASSEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 636
>gi|215274178|sp|P35712.3|SOX6_HUMAN RecName: Full=Transcription factor SOX-6
gi|71052113|gb|AAH47064.2| SOX6 protein [Homo sapiens]
gi|117646714|emb|CAL37472.1| hypothetical protein [synthetic construct]
gi|119588864|gb|EAW68458.1| SRY (sex determining region Y)-box 6, isoform CRA_a [Homo sapiens]
Length = 828
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R + P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 607 VYRDARGRASSEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 656
>gi|351695659|gb|EHA98577.1| Transcription factor SOX-6, partial [Heterocephalus glaber]
Length = 680
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R + P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 459 VYRDARGRASSEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 508
>gi|312373336|gb|EFR21096.1| hypothetical protein AND_17577 [Anopheles darlingi]
Length = 1201
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/42 (59%), Positives = 32/42 (76%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+ N + +KRPMNAFMVWS+ +RRK+ P MHN+EISKRL
Sbjct: 421 QQNADRVKRPMNAFMVWSRGQRRKMASDNPKMHNSEISKRLG 462
>gi|444730384|gb|ELW70770.1| Transcription factor SOX-6 [Tupaia chinensis]
Length = 767
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R + P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 546 VYRDARGRASSEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 595
>gi|73988590|ref|XP_864703.1| PREDICTED: transcription factor SOX-6 isoform 7 [Canis lupus
familiaris]
Length = 804
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R+ + P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 583 VYRDARSRASSEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 632
>gi|395815332|ref|XP_003781183.1| PREDICTED: transcription factor SOX-6 isoform 1 [Otolemur
garnettii]
Length = 841
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R + P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 620 VYRDARGRASSEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 669
>gi|343958136|dbj|BAK62923.1| transcription factor SOX-6 [Pan troglodytes]
Length = 781
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R + P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 560 VYRDARGRASSEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 609
>gi|317140389|gb|ADV03670.1| SRY-box containing protein 9 [Gadus morhua]
Length = 218
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 10 PVRVNGSSKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 60
>gi|193627270|ref|XP_001952775.1| PREDICTED: hypothetical protein LOC100167859 [Acyrthosiphon pisum]
Length = 460
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 31/38 (81%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+HIKRPMNAFMVW++++RR I P MHN+EISKRL
Sbjct: 69 DHIKRPMNAFMVWAKIQRRLIAHDNPKMHNSEISKRLG 106
>gi|117644228|emb|CAL37608.1| hypothetical protein [synthetic construct]
Length = 828
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R + P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 607 VYRDARGRASSEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 656
>gi|16945893|gb|AAL32172.1|AF329945_3 transcription factor SOX9 [Takifugu rubripes]
gi|33415940|gb|AAQ18507.1| transcription factor Sox9a [Takifugu rubripes]
Length = 484
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/51 (54%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 6 PMRATKKN-NPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R N N H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 91 PVRVNGSNKNKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 141
>gi|426244740|ref|XP_004016175.1| PREDICTED: transcription factor SOX-6 isoform 1 [Ovis aries]
Length = 841
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R + P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 620 VYRDARGRASSEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 669
>gi|348559932|ref|XP_003465769.1| PREDICTED: transcription factor SOX-6-like isoform 3 [Cavia
porcellus]
Length = 808
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R + P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 587 VYRDARGRASSEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 636
>gi|340378621|ref|XP_003387826.1| PREDICTED: hypothetical protein LOC100638519 [Amphimedon
queenslandica]
Length = 424
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/39 (58%), Positives = 32/39 (82%)
Query: 15 PNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
P+HIKRPMNAFMVWS+ R+++ + P MHN+E+SK+L
Sbjct: 8 PDHIKRPMNAFMVWSKERRKELAQENPRMHNSELSKKLG 46
>gi|327268011|ref|XP_003218792.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor SOX-1-like
[Anolis carolinensis]
Length = 360
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 33/42 (78%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K N + +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 45 KANQDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 86
>gi|224967054|ref|NP_001139291.1| transcription factor SOX-6 isoform 4 [Homo sapiens]
Length = 841
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R + P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 620 VYRDARGRASSEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 669
>gi|149634484|ref|XP_001510862.1| PREDICTED: transcription factor SOX-6 isoform 2 [Ornithorhynchus
anatinus]
Length = 829
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R + P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 608 VYRDARGRASSEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 657
>gi|2506521|sp|P48434.2|SOX9_CHICK RecName: Full=Transcription factor SOX-9
gi|1589736|gb|AAB09663.1| Sox9 transcription factor [Gallus gallus]
Length = 494
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 93 PVRVNGSSKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 143
>gi|431921480|gb|ELK18850.1| Transcription factor SOX-6 [Pteropus alecto]
Length = 828
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R + P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 607 VYRDARGRASSEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 656
>gi|83415189|ref|NP_001032751.1| transcription factor Sox-1b [Danio rerio]
gi|108885293|sp|Q2Z1R2.1|SOX1B_DANRE RecName: Full=Transcription factor Sox-1b
gi|82568654|dbj|BAE48582.1| transcription factor SOX1B [Danio rerio]
gi|159155893|gb|AAI54496.1| SRY-box containing gene 1b [Danio rerio]
Length = 340
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 33/42 (78%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K N + +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 31 KVNQDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 72
>gi|395826025|ref|XP_003786220.1| PREDICTED: transcription factor SOX-9 [Otolemur garnettii]
Length = 509
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 92 PVRVNGSSKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 142
>gi|332835937|ref|XP_003312980.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor SOX-6 [Pan
troglodytes]
Length = 841
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R + P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 620 VYRDARGRASSEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 669
>gi|296480170|tpg|DAA22285.1| TPA: SRY (sex determining region Y)-box 6-like isoform 3 [Bos
taurus]
Length = 804
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R + P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 583 VYRDARGRASSEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 632
>gi|354487265|ref|XP_003505794.1| PREDICTED: transcription factor SOX-13 [Cricetulus griseus]
Length = 614
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 34/44 (77%)
Query: 10 TKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
++ N +HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 408 SESRNSSHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILG 451
>gi|332216667|ref|XP_003257471.1| PREDICTED: transcription factor SOX-21 [Nomascus leucogenys]
Length = 152
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+H+KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 6 DHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLG 43
>gi|300296645|gb|ADJ96869.1| Sox9b [Clarias gariepinus]
Length = 458
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 36/52 (69%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 100 PVRVHGASKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 150
>gi|149634488|ref|XP_001510979.1| PREDICTED: transcription factor SOX-6 isoform 3 [Ornithorhynchus
anatinus]
Length = 788
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R + P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 567 VYRDARGRASSEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 616
>gi|224967050|ref|NP_001139283.1| transcription factor SOX-6 isoform 3 [Homo sapiens]
gi|119588865|gb|EAW68459.1| SRY (sex determining region Y)-box 6, isoform CRA_b [Homo sapiens]
Length = 801
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R + P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 580 VYRDARGRASSEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 629
>gi|119226241|ref|NP_035569.2| transcription factor SOX-13 [Mus musculus]
gi|288558854|sp|Q04891.4|SOX13_MOUSE RecName: Full=Transcription factor SOX-13; AltName: Full=SRY (Sex
determining region Y)-box 13; Short=mSox13
gi|148707698|gb|EDL39645.1| SRY-box containing gene 13, isoform CRA_a [Mus musculus]
Length = 613
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 34/44 (77%)
Query: 10 TKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
++ N +HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 408 SESRNSSHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILG 451
>gi|403254321|ref|XP_003919921.1| PREDICTED: transcription factor SOX-6 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 841
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R + P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 620 VYRDARGRASSEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 669
>gi|354485363|ref|XP_003504853.1| PREDICTED: transcription factor SOX-6 isoform 1 [Cricetulus
griseus]
Length = 807
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R + P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 586 VYRDARGRASSEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 635
>gi|198246579|gb|ACH82240.1| sox11a [Bombina maxima]
Length = 71
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/34 (79%), Positives = 30/34 (88%)
Query: 20 RPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
RPMNAF+VWS++ERRKI E PDMHNAEISKRL
Sbjct: 1 RPMNAFIVWSKIERRKIMEQSPDMHNAEISKRLG 34
>gi|449478706|ref|XP_002191643.2| PREDICTED: transcription factor Sox-9 [Taeniopygia guttata]
Length = 267
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 92 PVRVNGSSKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 142
>gi|426346950|ref|XP_004041131.1| PREDICTED: transcription factor SOX-9 [Gorilla gorilla gorilla]
Length = 509
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 92 PVRVNGSSKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 142
>gi|76631951|ref|XP_875555.1| PREDICTED: transcription factor SOX-1 [Bos taurus]
gi|297481343|ref|XP_002692040.1| PREDICTED: transcription factor SOX-1 [Bos taurus]
gi|296481598|tpg|DAA23713.1| TPA: SRY (sex determining region Y)-box 1-like [Bos taurus]
Length = 369
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 33/42 (78%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K N + +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 40 KANQDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 81
>gi|165932321|ref|NP_035578.3| transcription factor SOX-9 [Mus musculus]
gi|47117886|sp|Q04887.2|SOX9_MOUSE RecName: Full=Transcription factor SOX-9
gi|16226173|gb|AAL16093.1|AF421878_1 SRY sex determining region Y-box 9 protein [Mus musculus]
gi|19353856|gb|AAH24958.1| SRY-box containing gene 9 [Mus musculus]
gi|21706431|gb|AAH34264.1| SRY-box containing gene 9 [Mus musculus]
gi|23271672|gb|AAH23953.1| SRY-box containing gene 9 [Mus musculus]
gi|23271742|gb|AAH23796.1| SRY-box containing gene 9 [Mus musculus]
gi|23272221|gb|AAH23808.1| SRY-box containing gene 9 [Mus musculus]
gi|26326173|dbj|BAC26830.1| unnamed protein product [Mus musculus]
gi|148702453|gb|EDL34400.1| SRY-box containing gene 9 [Mus musculus]
Length = 507
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 92 PVRVNGSSKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 142
>gi|410907595|ref|XP_003967277.1| PREDICTED: transcription factor Sox-6-like [Takifugu rubripes]
Length = 719
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/46 (63%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Query: 8 RATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
R N P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 497 RGRNGNEP-HIKRPMNAFMVWAKDERRKILQTFPDMHNSNISKILG 541
>gi|402900912|ref|XP_003913405.1| PREDICTED: transcription factor SOX-9-like [Papio anubis]
Length = 509
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 92 PVRVNGSSKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 142
>gi|397494781|ref|XP_003818250.1| PREDICTED: transcription factor SOX-6 isoform 3 [Pan paniscus]
gi|426367569|ref|XP_004050801.1| PREDICTED: transcription factor SOX-6 isoform 2 [Gorilla gorilla
gorilla]
Length = 801
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R + P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 580 VYRDARGRASSEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 629
>gi|301777101|ref|XP_002923970.1| PREDICTED: transcription factor SOX-9-like [Ailuropoda melanoleuca]
Length = 462
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 92 PVRVNGSSKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 142
>gi|291223393|ref|XP_002731695.1| PREDICTED: transcription factor SoxD1-like [Saccoglossus
kowalevskii]
Length = 682
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R + N P HIKRPMNAFMVW++ ER+KI + PDMHN+ ISK L
Sbjct: 512 MYRDGRRYQPNEP-HIKRPMNAFMVWAKEERKKILSMHPDMHNSNISKILG 561
>gi|213626763|gb|AAI70060.1| Transcription factor SOX9 [Xenopus laevis]
Length = 477
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 92 PVRVNGSSKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 142
>gi|293340535|ref|XP_001081628.2| PREDICTED: transcription factor SOX-9 [Rattus norvegicus]
gi|392351708|ref|XP_003750998.1| PREDICTED: transcription factor SOX-9 [Rattus norvegicus]
gi|149054688|gb|EDM06505.1| rCG33659 [Rattus norvegicus]
Length = 507
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 92 PVRVNGSSKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 142
>gi|4336832|gb|AAD17974.1| SOX9 [Alligator mississippiensis]
Length = 495
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 92 PVRVNGSSKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 142
>gi|70909338|ref|NP_059978.1| transcription factor SOX-6 isoform 1 [Homo sapiens]
gi|12053073|emb|CAB66714.1| hypothetical protein [Homo sapiens]
gi|117645536|emb|CAL38234.1| hypothetical protein [synthetic construct]
gi|208965576|dbj|BAG72802.1| SRY (sex determining region Y)-box 6 [synthetic construct]
Length = 804
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R + P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 583 VYRDARGRASSEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 632
>gi|147899922|ref|NP_001084276.1| transcription factor Sox-9-A [Xenopus laevis]
gi|14581669|gb|AAK61366.1| transcription factor SOX9 [Xenopus laevis]
Length = 477
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 92 PVRVNGSSKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 142
>gi|297701645|ref|XP_002827816.1| PREDICTED: transcription factor SOX-9 isoform 1 [Pongo abelii]
gi|61216727|sp|Q9BG91.1|SOX9_CALJA RecName: Full=Transcription factor SOX-9
gi|12698706|gb|AAK01650.1| SOX9 [Callithrix jacchus]
Length = 509
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 92 PVRVNGSSKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 142
>gi|26340712|dbj|BAC34018.1| unnamed protein product [Mus musculus]
Length = 507
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 92 PVRVNGSSKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 142
>gi|47523170|ref|NP_999008.1| transcription factor SOX-9 [Sus scrofa]
gi|3024633|sp|O18896.1|SOX9_PIG RecName: Full=Transcription factor SOX-9
gi|2554931|gb|AAB81431.1| SOX-9 protein [Sus scrofa]
Length = 509
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 92 PVRVNGSSKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 142
>gi|426244742|ref|XP_004016176.1| PREDICTED: transcription factor SOX-6 isoform 2 [Ovis aries]
Length = 804
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R + P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 583 VYRDARGRASSEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 632
>gi|402894136|ref|XP_003910227.1| PREDICTED: transcription factor SOX-6-like [Papio anubis]
Length = 500
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R + P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 279 VYRDARGRASSEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 328
>gi|397494779|ref|XP_003818249.1| PREDICTED: transcription factor SOX-6 isoform 2 [Pan paniscus]
gi|426367567|ref|XP_004050800.1| PREDICTED: transcription factor SOX-6 isoform 1 [Gorilla gorilla
gorilla]
Length = 804
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R + P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 583 VYRDARGRASSEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 632
>gi|355752299|gb|EHH56419.1| Transcription factor SOX-6 [Macaca fascicularis]
Length = 828
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R + P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 607 VYRDARGRASSEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 656
>gi|348559928|ref|XP_003465767.1| PREDICTED: transcription factor SOX-6-like isoform 1 [Cavia
porcellus]
Length = 828
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R + P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 607 VYRDARGRASSEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 656
>gi|198246583|gb|ACH82242.1| sox11c [Bombina maxima]
Length = 71
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/34 (79%), Positives = 30/34 (88%)
Query: 20 RPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
RPMNAF+VWS++ERRKI E PDMHNAEISKRL
Sbjct: 1 RPMNAFIVWSKIERRKIMEQSPDMHNAEISKRLG 34
>gi|148707700|gb|EDL39647.1| SRY-box containing gene 13, isoform CRA_c [Mus musculus]
Length = 594
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 34/44 (77%)
Query: 10 TKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
++ N +HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 389 SESRNSSHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILG 432
>gi|67078510|ref|NP_001019922.1| transcription factor SOX-6 [Rattus norvegicus]
gi|66910597|gb|AAH97403.1| SRY (sex determining region Y)-box 6 [Rattus norvegicus]
Length = 787
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R + P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 566 VYRDARGRASSEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 615
>gi|62860559|gb|AAY16521.1| SRY sex determining region Y-box 9 [Anas platyrhynchos]
Length = 489
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 92 PVRVNGSSKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 142
>gi|397494777|ref|XP_003818248.1| PREDICTED: transcription factor SOX-6 isoform 1 [Pan paniscus]
gi|426367571|ref|XP_004050802.1| PREDICTED: transcription factor SOX-6 isoform 3 [Gorilla gorilla
gorilla]
Length = 841
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R + P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 620 VYRDARGRASSEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 669
>gi|332210439|ref|XP_003254317.1| PREDICTED: transcription factor SOX-6 isoform 3 [Nomascus
leucogenys]
Length = 801
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R + P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 580 VYRDARGRASSEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 629
>gi|332210437|ref|XP_003254316.1| PREDICTED: transcription factor SOX-6 isoform 2 [Nomascus
leucogenys]
Length = 841
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R + P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 620 VYRDARGRASSEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 669
>gi|327267853|ref|XP_003218713.1| PREDICTED: transcription factor SOX-21-like [Anolis carolinensis]
Length = 283
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 31/38 (81%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
H+KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 6 EHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLG 43
>gi|213958589|gb|ACJ54691.1| SRY-like HMG box protein 11a [Odorrana schmackeri]
Length = 71
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/34 (79%), Positives = 30/34 (88%)
Query: 20 RPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
RPMNAF+VWS++ERRKI E PDMHNAEISKRL
Sbjct: 1 RPMNAFIVWSKIERRKIMEQSPDMHNAEISKRLG 34
>gi|343960611|dbj|BAK61895.1| transcription factor SOX-6 [Pan troglodytes]
Length = 802
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R + P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 581 VYRDARGRASSEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 630
>gi|291410231|ref|XP_002721401.1| PREDICTED: SRY (sex determining region Y)-box 6-like isoform 2
[Oryctolagus cuniculus]
Length = 788
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R + P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 567 VYRDARGRASSEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 616
>gi|291410229|ref|XP_002721400.1| PREDICTED: SRY (sex determining region Y)-box 6-like isoform 1
[Oryctolagus cuniculus]
Length = 841
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R + P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 620 VYRDARGRASSEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 669
>gi|3077736|dbj|BAA25786.1| SOX13 [Mus musculus]
Length = 595
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 34/44 (77%)
Query: 10 TKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
++ N +HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 390 SESRNSSHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILG 433
>gi|403254323|ref|XP_003919922.1| PREDICTED: transcription factor SOX-6 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 804
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R + P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 583 VYRDARGRASSEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 632
>gi|397478488|ref|XP_003810577.1| PREDICTED: transcription factor SOX-9-like [Pan paniscus]
Length = 309
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Query: 7 MRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
+ + KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 95 VNGSSKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 142
>gi|347963094|ref|XP_001687757.2| AGAP000066-PA [Anopheles gambiae str. PEST]
gi|333467363|gb|EDO64360.2| AGAP000066-PA [Anopheles gambiae str. PEST]
Length = 782
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/38 (71%), Positives = 31/38 (81%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
NHIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 650 NHIKRPMNAFMVWAKDERRKILKACPDMHNSNISKILG 687
>gi|332210435|ref|XP_003254315.1| PREDICTED: transcription factor SOX-6 isoform 1 [Nomascus
leucogenys]
Length = 804
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R + P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 583 VYRDARGRASSEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 632
>gi|149058611|gb|EDM09768.1| SRY (sex determining region Y)-box 13 (predicted), isoform CRA_b
[Rattus norvegicus]
Length = 522
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 34/44 (77%)
Query: 10 TKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
++ N +HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 407 SESRNSSHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILG 450
>gi|109107169|ref|XP_001090887.1| PREDICTED: transcription factor SOX-6 isoform 5 [Macaca mulatta]
Length = 804
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R + P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 583 VYRDARGRASSEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 632
>gi|33415956|gb|AAQ18515.1| transcription factor Sox6b [Takifugu rubripes]
Length = 738
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/46 (63%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Query: 8 RATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
R N P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 516 RGRNGNEP-HIKRPMNAFMVWAKDERRKILQTFPDMHNSNISKILG 560
>gi|403254325|ref|XP_003919923.1| PREDICTED: transcription factor SOX-6 isoform 3 [Saimiri
boliviensis boliviensis]
Length = 801
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R + P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 580 VYRDARGRASSEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 629
>gi|395815334|ref|XP_003781184.1| PREDICTED: transcription factor SOX-6 isoform 2 [Otolemur
garnettii]
Length = 804
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R + P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 583 VYRDARGRASSEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 632
>gi|354485367|ref|XP_003504855.1| PREDICTED: transcription factor SOX-6 isoform 3 [Cricetulus
griseus]
Length = 787
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R + P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 566 VYRDARGRASSEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 615
>gi|354485365|ref|XP_003504854.1| PREDICTED: transcription factor SOX-6 isoform 2 [Cricetulus
griseus]
Length = 827
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R + P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 606 VYRDARGRASSEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 655
>gi|348559930|ref|XP_003465768.1| PREDICTED: transcription factor SOX-6-like isoform 2 [Cavia
porcellus]
Length = 801
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R + P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 580 VYRDARGRASSEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 629
>gi|239977610|sp|B7ZR65.1|SOX9A_XENLA RecName: Full=Transcription factor Sox-9-A
gi|213623669|gb|AAI70058.1| Transcription factor SOX9 [Xenopus laevis]
gi|387860562|gb|AFK08428.1| sex determining region Y-box 9 [Xenopus laevis]
Length = 477
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 92 PVRVNGSSKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 142
>gi|166078065|gb|ABY81084.1| SOX9 protein [Canis lupus familiaris]
gi|166078067|gb|ABY81085.1| SOX9 protein [Vulpes vulpes]
gi|166078069|gb|ABY81086.1| SOX9 protein [Vulpes lagopus]
gi|166078071|gb|ABY81087.1| SOX9 protein [Nyctereutes procyonoides procyonoides]
Length = 513
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 92 PVRVNGSSKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 142
>gi|126332115|ref|XP_001367007.1| PREDICTED: transcription factor SOX-6 isoform 2 [Monodelphis
domestica]
Length = 807
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 586 VYRDARGRASTEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 635
>gi|109107175|ref|XP_001090309.1| PREDICTED: transcription factor SOX-6 isoform 1 [Macaca mulatta]
Length = 801
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R + P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 580 VYRDARGRASSEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 629
>gi|27801587|emb|CAD60660.1| SRY-box containing gene 21a [Danio rerio]
Length = 239
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+H+KRPMNAFMVWS+++RRK+ P MHN+EISKRL
Sbjct: 6 DHVKRPMNAFMVWSRVQRRKMALDNPKMHNSEISKRLG 43
>gi|70980557|ref|NP_001020731.1| transcription factor SOX-6 isoform 3 [Mus musculus]
gi|26326701|dbj|BAC27094.1| unnamed protein product [Mus musculus]
Length = 785
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R + P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 564 VYRDARGRASSEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 613
>gi|13938028|gb|AAH07130.1| Sox13 protein [Mus musculus]
Length = 595
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 34/44 (77%)
Query: 10 TKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
++ N +HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 390 SESRNSSHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILG 433
>gi|401709628|dbj|BAM36487.1| SRY-box 6 [Xenopus laevis]
Length = 760
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R + P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 539 VYRDARGRSSSEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 588
>gi|157092548|gb|ABV22074.1| transcription factor Sox11 [Carassius auratus x Cyprinus carpio x
Carassius cuvieri]
Length = 71
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/35 (80%), Positives = 30/35 (85%)
Query: 19 KRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
KRPMNAFMVWS++ERRKI E P MHNAEISKRL
Sbjct: 1 KRPMNAFMVWSKIERRKIMEQSPHMHNAEISKRLG 35
>gi|149050202|gb|EDM02526.1| rCG37201 [Rattus norvegicus]
Length = 176
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+H+KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 6 DHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLG 43
>gi|348559934|ref|XP_003465770.1| PREDICTED: transcription factor SOX-6-like isoform 4 [Cavia
porcellus]
Length = 787
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R + P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 566 VYRDARGRASSEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 615
>gi|340721649|ref|XP_003399229.1| PREDICTED: SOX domain-containing protein dichaete-like [Bombus
terrestris]
Length = 311
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/37 (70%), Positives = 31/37 (83%)
Query: 17 HIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
HIKRPMNAFMVWS+++R+KI P MHN+EISKRL
Sbjct: 40 HIKRPMNAFMVWSRIQRKKIALDNPKMHNSEISKRLG 76
>gi|197098168|ref|NP_001125207.1| transcription factor SOX-6 [Pongo abelii]
gi|75042225|sp|Q5RCU4.1|SOX6_PONAB RecName: Full=Transcription factor SOX-6
gi|55727314|emb|CAH90413.1| hypothetical protein [Pongo abelii]
Length = 787
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R + P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 566 VYRDARGRASSEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 615
>gi|307196019|gb|EFN77744.1| Transcription factor SOX-21 [Harpegnathos saltator]
Length = 333
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/37 (70%), Positives = 31/37 (83%)
Query: 17 HIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
HIKRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 10 HIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 46
>gi|99030439|gb|ABF61604.1| HMG box transcription factor Sox9a2 [Tachysurus fulvidraco]
Length = 457
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 36/52 (69%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 99 PVRVHGASKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 149
>gi|33415936|gb|AAQ18505.1| transcription factor Sox8a [Takifugu rubripes]
Length = 462
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMRA--TKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 87 PVRGNGSLKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 137
>gi|30583965|gb|AAP36231.1| Homo sapiens SRY (sex determining region Y)-box 9 (campomelic
dysplasia, autosomal sex-reversal) [synthetic construct]
gi|60653303|gb|AAX29346.1| SRY-box 9 [synthetic construct]
gi|60653305|gb|AAX29347.1| SRY-box 9 [synthetic construct]
Length = 510
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 92 PVRVNGSSKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 142
>gi|358332978|dbj|GAA51560.1| transcription factor SOX1/2/3/14/21 [Clonorchis sinensis]
Length = 288
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 32/38 (84%)
Query: 17 HIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLAL 54
H+KRPMNAFMVWS+ +R+K+ + P MHN+EISKRL +
Sbjct: 127 HVKRPMNAFMVWSRGQRKKMAQANPKMHNSEISKRLGV 164
>gi|332254033|ref|XP_003276135.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor SOX-9-like
[Nomascus leucogenys]
Length = 510
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 92 PVRVNGSSKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 142
>gi|326930889|ref|XP_003211570.1| PREDICTED: transcription factor SOX-9-like [Meleagris gallopavo]
Length = 316
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 92 PVRVNGSSKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 142
>gi|259013584|ref|NP_001158340.1| SRY-box containing gene 6b [Oryzias latipes]
gi|227336638|gb|ACP21266.1| SRY-box containing gene 6b [Oryzias latipes]
Length = 804
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/46 (63%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Query: 8 RATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
R N P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 587 RGRNSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 631
>gi|126332113|ref|XP_001366961.1| PREDICTED: transcription factor SOX-6 isoform 1 [Monodelphis
domestica]
Length = 827
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 606 VYRDARGRASTEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 655
>gi|3702612|emb|CAA09270.1| Sox6 protein [Mus musculus]
Length = 309
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R + P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 88 VYRDARGRASSEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 137
>gi|4557853|ref|NP_000337.1| transcription factor SOX-9 [Homo sapiens]
gi|74136295|ref|NP_001028040.1| transcription factor SOX-9 [Macaca mulatta]
gi|1351096|sp|P48436.1|SOX9_HUMAN RecName: Full=Transcription factor SOX-9
gi|48428585|sp|P61753.1|SOX9_MACMU RecName: Full=Transcription factor SOX-9
gi|48428586|sp|P61754.1|SOX9_PONPY RecName: Full=Transcription factor SOX-9
gi|758103|emb|CAA86598.1| SOX9 [Homo sapiens]
gi|807060|gb|AAB32870.1| inactivating mutations associated with campomelic dysplasia and
autosomal XY sex reversal syndromes, partial [Homo
sapiens]
gi|12698704|gb|AAK01649.1| SOX9 [Pongo pygmaeus]
gi|12698708|gb|AAK01651.1| SOX9 [Macaca mulatta]
gi|14044055|gb|AAH07951.1| SRY (sex determining region Y)-box 9 [Homo sapiens]
gi|30582589|gb|AAP35521.1| SRY (sex determining region Y)-box 9 (campomelic dysplasia,
autosomal sex-reversal) [Homo sapiens]
gi|33991649|gb|AAH56420.1| SRY (sex determining region Y)-box 9 [Homo sapiens]
gi|60656361|gb|AAX32744.1| SRY-box [synthetic construct]
gi|119609508|gb|EAW89102.1| SRY (sex determining region Y)-box 9 (campomelic dysplasia,
autosomal sex-reversal) [Homo sapiens]
gi|168277508|dbj|BAG10732.1| transcription factor SOX-9 [synthetic construct]
gi|1092657|prf||2024340A SRY-related protein
Length = 509
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 92 PVRVNGSSKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 142
>gi|49204505|dbj|BAD24665.1| SOX1 [Cynops pyrrhogaster]
Length = 367
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 33/42 (78%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K N + +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 37 KANQDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 78
>gi|927213|dbj|BAA09618.1| leucine zipper-containing protein SOX-LZ [Mus musculus]
Length = 786
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R + P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 565 VYRDARGRASSEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 614
>gi|356995555|dbj|BAL14714.1| transcription factor SOX1 [Cynops pyrrhogaster]
Length = 367
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 33/42 (78%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K N + +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 37 KANQDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 78
>gi|296217653|ref|XP_002755044.1| PREDICTED: transcription factor SOX-6 isoform 1 [Callithrix
jacchus]
Length = 841
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R + P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 620 VYRDARGRASSEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 669
>gi|159024079|gb|ABW87300.1| Sox9a2 [Tachysurus fulvidraco]
Length = 457
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 36/52 (69%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 99 PVRVHGASKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 149
>gi|148685141|gb|EDL17088.1| mCG141507, isoform CRA_c [Mus musculus]
Length = 787
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R + P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 566 VYRDARGRASSEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 615
>gi|118344654|ref|NP_001072112.1| DNA-binding transcription factor Sox8 [Takifugu rubripes]
gi|60549975|gb|AAX24132.1| DNA-binding transcription factor Sox8 [Takifugu rubripes]
Length = 462
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMRA--TKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 87 PVRGNGSLKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 137
>gi|13442974|gb|AAK26244.1| SOX6 splice variant [Homo sapiens]
Length = 341
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R + P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 220 VYRDARGRASSEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 269
>gi|296217657|ref|XP_002755046.1| PREDICTED: transcription factor SOX-6 isoform 3 [Callithrix
jacchus]
Length = 801
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R + P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 580 VYRDARGRASSEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 629
>gi|149068198|gb|EDM17750.1| SRY-box containing gene 6, isoform CRA_a [Rattus norvegicus]
gi|149068199|gb|EDM17751.1| SRY-box containing gene 6, isoform CRA_a [Rattus norvegicus]
Length = 827
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R + P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 606 VYRDARGRASSEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 655
>gi|70980559|ref|NP_001020730.1| transcription factor SOX-6 isoform 2 [Mus musculus]
Length = 787
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R + P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 566 VYRDARGRASSEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 615
>gi|6755610|ref|NP_035575.1| transcription factor SOX-6 isoform 1 [Mus musculus]
gi|1351094|sp|P40645.2|SOX6_MOUSE RecName: Full=Transcription factor SOX-6; AltName: Full=SOX-LZ
gi|1016686|gb|AAC52263.1| SOX6 [Mus musculus]
gi|74208769|dbj|BAE21153.1| unnamed protein product [Mus musculus]
gi|148685137|gb|EDL17084.1| mCG141507, isoform CRA_a [Mus musculus]
gi|148685138|gb|EDL17085.1| mCG141507, isoform CRA_a [Mus musculus]
gi|148685139|gb|EDL17086.1| mCG141507, isoform CRA_a [Mus musculus]
Length = 827
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R + P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 606 VYRDARGRASSEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 655
>gi|2230883|emb|CAA73847.1| Sry-related Box 1 protein [Homo sapiens]
Length = 387
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 33/42 (78%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K N + +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 45 KANQDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 86
>gi|405952909|gb|EKC20663.1| Transcription factor SOX-14 [Crassostrea gigas]
Length = 265
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/37 (67%), Positives = 31/37 (83%)
Query: 17 HIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
H+KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 34 HVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLG 70
>gi|126332117|ref|XP_001367059.1| PREDICTED: transcription factor SOX-6 isoform 3 [Monodelphis
domestica]
Length = 786
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 565 VYRDARGRASTEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 614
>gi|14290107|gb|AAK59254.1| HMG box transcription factor Sox9a1 [Monopterus albus]
Length = 482
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 91 PVRVNGSTKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 141
>gi|241999950|ref|XP_002434618.1| sox14, putative [Ixodes scapularis]
gi|215497948|gb|EEC07442.1| sox14, putative [Ixodes scapularis]
Length = 355
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/38 (68%), Positives = 31/38 (81%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+H+KRPMNAFMVWS+ +RRKI P MHN+EISKRL
Sbjct: 46 SHVKRPMNAFMVWSRAQRRKIALENPKMHNSEISKRLG 83
>gi|296188990|ref|XP_002742590.1| PREDICTED: transcription factor SOX-1 [Callithrix jacchus]
Length = 390
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 33/42 (78%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K N + +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 47 KANQDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 88
>gi|281341471|gb|EFB17055.1| hypothetical protein PANDA_006658 [Ailuropoda melanoleuca]
Length = 621
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 32/40 (80%)
Query: 14 NPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
N +HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 420 NSSHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILG 459
>gi|114154398|gb|ABI53355.1| transcription factor SoxB2 [Strongylocentrotus purpuratus]
Length = 270
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 31/38 (81%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+H+KRPMNAFMVW + +RRK+ + P MHN+EISKRL
Sbjct: 12 DHVKRPMNAFMVWPRGQRRKLAQEDPKMHNSEISKRLG 49
>gi|149068200|gb|EDM17752.1| SRY-box containing gene 6, isoform CRA_b [Rattus norvegicus]
Length = 854
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R + P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 633 VYRDARGRASSEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 682
>gi|395543417|ref|XP_003773615.1| PREDICTED: transcription factor SOX-6 [Sarcophilus harrisii]
Length = 831
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 610 VYRDARGRASTEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 659
>gi|332018669|gb|EGI59241.1| Transcription factor Sox-14 [Acromyrmex echinatior]
Length = 337
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/37 (70%), Positives = 31/37 (83%)
Query: 17 HIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
HIKRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 10 HIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 46
>gi|110835872|emb|CAH10150.1| transcription factor SOX-9 [Bufo bufo]
Length = 481
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 92 PVRVNGSSKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 142
>gi|2764544|emb|CAA04278.1| HMG-box transcription factor [Mus musculus]
Length = 984
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 34/44 (77%)
Query: 10 TKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
++ N +HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 389 SESRNSSHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILG 432
>gi|1711464|sp|P53783.1|SOX1_MOUSE RecName: Full=Transcription factor SOX-1
gi|1213025|emb|CAA63846.1| SOX1 protein [Mus musculus]
Length = 391
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 33/42 (78%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K N + +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 45 KANQDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 86
>gi|296217655|ref|XP_002755045.1| PREDICTED: transcription factor SOX-6 isoform 2 [Callithrix
jacchus]
Length = 804
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R + P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 583 VYRDARGRASSEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 632
>gi|90762066|gb|ABD97869.1| putative SoxB transcription factor [Acropora millepora]
Length = 79
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/37 (70%), Positives = 31/37 (83%)
Query: 17 HIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
H+KRPMNAFMVWS+ ERRKI + P MHN+EISK+L
Sbjct: 7 HVKRPMNAFMVWSREERRKIAQDNPKMHNSEISKQLG 43
>gi|12698702|gb|AAK01648.1| SOX9 [Hylobates sp. TIB-201]
Length = 509
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 92 PVRVNGSSKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 142
>gi|13442973|gb|AAK26243.1| SOX6 [Homo sapiens]
Length = 361
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R + P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 240 VYRDARGRASSEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 289
>gi|47230468|emb|CAF99661.1| unnamed protein product [Tetraodon nigroviridis]
Length = 689
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/46 (63%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Query: 8 RATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
R N P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 439 RGRNSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 483
>gi|427786707|gb|JAA58805.1| Putative sry sex determining region y-box 2 [Rhipicephalus
pulchellus]
Length = 283
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 34/45 (75%)
Query: 9 ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+ + + +H+KRPMNAFMVWS+ +RRK+ P MHN+EISKRL
Sbjct: 27 GSGRGSADHVKRPMNAFMVWSRGQRRKMAIENPKMHNSEISKRLG 71
>gi|259013436|ref|NP_001158461.1| Sox14/21-like protein [Saccoglossus kowalevskii]
gi|197320519|gb|ACH68421.1| Sox14/21-like protein [Saccoglossus kowalevskii]
Length = 244
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+H+KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 6 DHVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 43
>gi|194673948|ref|XP_001255513.2| PREDICTED: transcription factor SOX-13 [Bos taurus]
gi|297483842|ref|XP_002693947.1| PREDICTED: transcription factor SOX-13 [Bos taurus]
gi|296479429|tpg|DAA21544.1| TPA: Transcription factor SOX-13-like [Bos taurus]
Length = 622
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 32/40 (80%)
Query: 14 NPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
N +HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 420 NSSHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILG 459
>gi|449280855|gb|EMC88080.1| Transcription factor SOX-6 [Columba livia]
Length = 790
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R + P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 569 VYRDSRGRASSEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 618
>gi|291406447|ref|XP_002719545.1| PREDICTED: transcription factor SOX9 [Oryctolagus cuniculus]
Length = 506
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 92 PVRVNGSSKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 142
>gi|449265641|gb|EMC76804.1| Transcription factor SOX-10 [Columba livia]
Length = 460
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/51 (52%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 6 PMRATKKNNPN-HIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R N H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 85 PVRVNGSNKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 135
>gi|381141861|gb|AFF57872.1| Sox10a [Epinephelus coioides]
gi|381141865|gb|AFF57874.1| Sox10a [Epinephelus coioides]
Length = 499
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/51 (52%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 6 PMRATKKNNPN-HIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R N H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 95 PVRVNNGNKAKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 145
>gi|358415097|ref|XP_003583003.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor SOX-12-like
[Bos taurus]
Length = 385
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/35 (77%), Positives = 29/35 (82%)
Query: 17 HIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKR 51
HIKRPM AFMVWSQ ER +I + PDMHNAEISKR
Sbjct: 110 HIKRPMXAFMVWSQHERXEIMDQWPDMHNAEISKR 144
>gi|324503413|gb|ADY41486.1| Transcription factor Sox-2 [Ascaris suum]
Length = 329
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 36/49 (73%), Gaps = 1/49 (2%)
Query: 5 SPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
SP KK + + +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 49 SPGSKDKKGD-DRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 96
>gi|114154476|gb|ABI53394.1| transcription factor SoxB2 [Strongylocentrotus pallidus]
Length = 267
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 31/38 (81%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+H+KRPMNAFMVWS+ +RRK+ + P MHN+EI KRL
Sbjct: 12 DHVKRPMNAFMVWSRGQRRKLAQENPKMHNSEIGKRLG 49
>gi|348502014|ref|XP_003438564.1| PREDICTED: transcription factor SOX-9-like [Oreochromis niloticus]
Length = 653
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 247 PVRVNGSTKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 297
>gi|148707699|gb|EDL39646.1| SRY-box containing gene 13, isoform CRA_b [Mus musculus]
Length = 504
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 34/44 (77%)
Query: 10 TKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
++ N +HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 389 SESRNSSHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILG 432
>gi|440903922|gb|ELR54509.1| Transcription factor SOX-13, partial [Bos grunniens mutus]
Length = 627
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 32/40 (80%)
Query: 14 NPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
N +HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 425 NSSHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILG 464
>gi|402580207|gb|EJW74157.1| HMG box family protein, partial [Wuchereria bancrofti]
Length = 167
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+H+KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 79 SHVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLG 116
>gi|354466611|ref|XP_003495767.1| PREDICTED: transcription factor SOX-9-like [Cricetulus griseus]
Length = 572
Score = 60.1 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 227 PVRVNGSSKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 277
>gi|307174178|gb|EFN64823.1| Transcription factor SOX-5 [Camponotus floridanus]
Length = 523
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 36/49 (73%), Gaps = 2/49 (4%)
Query: 7 MRATKKNNPN--HIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+R K+ N N HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 310 VRQQKRENENKPHIKRPMNAFMVWAKDERRKILKACPDMHNSNISKILG 358
>gi|60360276|dbj|BAD90382.1| mKIAA4243 protein [Mus musculus]
Length = 565
Score = 60.1 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 150 PVRVNGSSKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 200
>gi|51234099|gb|AAT97968.1| Sox11b protein [Paramisgurnus dabryanus]
Length = 68
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/33 (81%), Positives = 29/33 (87%)
Query: 21 PMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
PMNAFMVWS++ERRKI E PDMHNAEISKRL
Sbjct: 1 PMNAFMVWSKIERRKIMEQSPDMHNAEISKRLG 33
>gi|50950207|ref|NP_001002978.1| transcription factor SOX-9 [Canis lupus familiaris]
gi|61216612|sp|Q7YRJ7.1|SOX9_CANFA RecName: Full=Transcription factor SOX-9
gi|33285963|gb|AAP69840.1| SOX9 [Canis lupus familiaris]
Length = 513
Score = 60.1 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 92 PVRVNGSSKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 142
>gi|417402083|gb|JAA47900.1| Putative transcription factor sox-9 [Desmodus rotundus]
Length = 509
Score = 60.1 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 92 PVRVNGSSKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 142
>gi|392356265|ref|XP_003752300.1| PREDICTED: transcription factor SOX-1-like, partial [Rattus
norvegicus]
Length = 181
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 33/42 (78%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K N + +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 45 KANQDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 86
>gi|326920044|ref|XP_003206286.1| PREDICTED: transcription factor SOX-6-like [Meleagris gallopavo]
Length = 789
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R + P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 568 VYRDSRGRASSEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 617
>gi|255506305|gb|ACU12296.1| Sox9 [Crocodylus palustris]
Length = 494
Score = 60.1 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 92 PVRVNGSSKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 142
>gi|255759982|ref|NP_001157540.1| transcription factor SOX-5 [Oncorhynchus mykiss]
gi|238815155|gb|ACR56740.1| Sox5 [Oncorhynchus mykiss]
Length = 762
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 33/43 (76%)
Query: 11 KKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+ N+ HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 552 RGNSEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 594
>gi|45708965|gb|AAH67407.1| Sox6 protein [Mus musculus]
Length = 787
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R + P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 566 VYRDARGRAGSEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 615
>gi|40642795|emb|CAD58841.1| SoxE protein [Ciona intestinalis]
Length = 808
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Query: 7 MRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
M ++K P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 197 MNGSQKTKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 244
>gi|402902493|ref|XP_003914135.1| PREDICTED: transcription factor Sox-1b-like [Papio anubis]
Length = 295
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 33/42 (78%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K N + +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 46 KANQDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 87
>gi|159024073|gb|ABW87297.1| transcription factor Sox9 [Cynoglossus semilaevis]
Length = 219
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 9 PVRVNGSTKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 59
>gi|82582249|sp|Q6IZ48.2|SOX8_TETNG RecName: Full=Transcription factor Sox-8
Length = 462
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMRA--TKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 87 PVRGNGSLKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 137
>gi|345797814|ref|XP_545679.3| PREDICTED: LOW QUALITY PROTEIN: transcription factor SOX-13 [Canis
lupus familiaris]
Length = 624
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 32/40 (80%)
Query: 14 NPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
N +HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 422 NSSHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILG 461
>gi|344277004|ref|XP_003410295.1| PREDICTED: transcription factor SOX-13 [Loxodonta africana]
Length = 619
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 32/40 (80%)
Query: 14 NPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
N +HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 417 NSSHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILG 456
>gi|196128947|gb|ACG70782.1| HMG-box containing protein 9 [Trachemys scripta]
Length = 492
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 92 PVRVNGSSKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 142
>gi|410896618|ref|XP_003961796.1| PREDICTED: transcription factor Sox-1a-like [Takifugu rubripes]
gi|33415912|gb|AAQ18493.1| transcription factor Sox1a [Takifugu rubripes]
Length = 343
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 2 GLYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
G P +K N +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 22 GQTGPNSGSKANQ-ERVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 72
>gi|449501988|ref|XP_002198313.2| PREDICTED: transcription factor SOX-6 [Taeniopygia guttata]
Length = 789
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R + P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 568 VYRDSRGRASSEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 617
>gi|432090681|gb|ELK24022.1| Transcription factor SOX-13 [Myotis davidii]
Length = 610
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 32/40 (80%)
Query: 14 NPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
N +HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 413 NSSHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILG 452
>gi|170042953|ref|XP_001849171.1| transcription factor SOX-19 [Culex quinquefasciatus]
gi|167866359|gb|EDS29742.1| transcription factor SOX-19 [Culex quinquefasciatus]
Length = 449
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 32/42 (76%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+ N + +KRPMNAFMVWS+ +RRK+ P MHN+EISKRL
Sbjct: 139 QQNADRVKRPMNAFMVWSRGQRRKMASDNPKMHNSEISKRLG 180
>gi|357609695|gb|EHJ66582.1| sex-determining region y protein, sry [Danaus plexippus]
Length = 368
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 34/45 (75%)
Query: 9 ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
++K +N +KRPMNAFMVWS+ +RRK+ P MHN+EISKRL
Sbjct: 81 SSKNSNAERVKRPMNAFMVWSRGQRRKMASDNPKMHNSEISKRLG 125
>gi|345451238|gb|AEN94299.1| transcription factor SOX-9 [Talpa occidentalis]
Length = 294
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 92 PVRVNGSSKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 142
>gi|307181555|gb|EFN69116.1| Transcription factor SOX-21 [Camponotus floridanus]
Length = 356
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/37 (70%), Positives = 31/37 (83%)
Query: 17 HIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
HIKRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 10 HIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 46
>gi|301765640|ref|XP_002918240.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor SOX-13-like
[Ailuropoda melanoleuca]
Length = 623
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 32/40 (80%)
Query: 14 NPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
N +HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 422 NSSHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILG 461
>gi|194210202|ref|XP_001915402.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor SOX-13-like
[Equus caballus]
Length = 622
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 32/40 (80%)
Query: 14 NPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
N +HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 420 NSSHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILG 459
>gi|121544128|gb|ABM55677.1| Sox3 [Carassius auratus]
Length = 297
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 33/41 (80%)
Query: 13 NNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
N+ + +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 28 NDQDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 68
>gi|113367023|gb|ABI34568.1| sox9 [Bufo gargarizans]
Length = 481
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 92 PVRVNGSSKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 142
>gi|395838800|ref|XP_003792294.1| PREDICTED: transcription factor SOX-13 isoform 2 [Otolemur
garnettii]
Length = 622
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 32/40 (80%)
Query: 14 NPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
N +HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 420 NSSHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILG 459
>gi|363734209|ref|XP_421000.3| PREDICTED: transcription factor SOX-6 [Gallus gallus]
Length = 789
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R + P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 568 VYRDSRGRASSEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 617
>gi|297694438|ref|XP_002824485.1| PREDICTED: transcription factor SOX-1 [Pongo abelii]
Length = 373
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 33/42 (78%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K N + +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 47 KANQDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 88
>gi|198424605|ref|XP_002122233.1| PREDICTED: SoxE protein [Ciona intestinalis]
Length = 903
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Query: 7 MRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
M ++K P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 292 MNGSQKTKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 339
>gi|403294823|ref|XP_003938363.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor SOX-13
[Saimiri boliviensis boliviensis]
Length = 623
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 32/40 (80%)
Query: 14 NPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
N +HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 421 NSSHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILG 460
>gi|110735128|gb|ABG89134.1| sox9c [Kryptolebias marmoratus]
Length = 198
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 11 PVRVNGSTKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 61
>gi|40642791|emb|CAD58839.1| SoxB2 protein [Ciona intestinalis]
Length = 344
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 31/38 (81%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
H+KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 10 GHVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 47
>gi|117606322|ref|NP_033259.2| transcription factor SOX-1 [Mus musculus]
gi|30024606|dbj|BAC75667.1| transcriptional factor SOX1 [Mus musculus]
gi|225000942|gb|AAI72600.1| SRY-box containing gene 1 [synthetic construct]
gi|225001012|gb|AAI72706.1| SRY-box containing gene 1 [synthetic construct]
Length = 391
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 33/42 (78%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K N + +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 45 KANQDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 86
>gi|390477450|ref|XP_002807773.2| PREDICTED: transcription factor SOX-13 [Callithrix jacchus]
Length = 489
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 32/40 (80%)
Query: 14 NPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
N +HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 287 NSSHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILG 326
>gi|380818218|gb|AFE80983.1| transcription factor SOX-13 [Macaca mulatta]
Length = 615
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 32/40 (80%)
Query: 14 NPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
N +HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 413 NSSHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILG 452
>gi|355558871|gb|EHH15651.1| hypothetical protein EGK_01767 [Macaca mulatta]
Length = 620
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 32/40 (80%)
Query: 14 NPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
N +HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 418 NSSHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILG 457
>gi|224552344|gb|ACN54527.1| SRY-box 9 [Rhinella marina]
Length = 482
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 92 PVRVNGSSKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 142
>gi|51234107|gb|AAT97972.1| Sox11c protein [Paramisgurnus dabryanus]
Length = 69
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/33 (81%), Positives = 29/33 (87%)
Query: 21 PMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
PMNAFMVWS++ERRKI E PDMHNAEISKRL
Sbjct: 1 PMNAFMVWSKIERRKIMEQSPDMHNAEISKRLG 33
>gi|32481093|gb|AAP83942.1| HMG-box transcription factor Sox11b [Cyprinus carpio]
Length = 69
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/33 (81%), Positives = 29/33 (87%)
Query: 21 PMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
PMNAFMVWS++ERRKI E PDMHNAEISKRL
Sbjct: 1 PMNAFMVWSKIERRKIMEQSPDMHNAEISKRLG 33
>gi|431892911|gb|ELK03339.1| Transcription factor SOX-13 [Pteropus alecto]
Length = 610
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 32/40 (80%)
Query: 14 NPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
N +HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 413 NSSHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILG 452
>gi|395729151|ref|XP_003775498.1| PREDICTED: transcription factor SOX-13 isoform 2 [Pongo abelii]
Length = 489
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 32/40 (80%)
Query: 14 NPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
N +HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 287 NSSHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILG 326
>gi|118341423|gb|AAI27564.1| Unknown (protein for IMAGE:7062873) [Danio rerio]
Length = 348
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/52 (53%), Positives = 36/52 (69%), Gaps = 3/52 (5%)
Query: 6 PMRATK--KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R K+ P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 95 PVRVNSGSKSKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 145
>gi|32481089|gb|AAP83941.1| HMG-box transcription factor Sox11a [Cyprinus carpio]
Length = 69
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/33 (81%), Positives = 29/33 (87%)
Query: 21 PMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
PMNAFMVWS++ERRKI E PDMHNAEISKRL
Sbjct: 1 PMNAFMVWSKIERRKIMEQSPDMHNAEISKRLG 33
>gi|348535901|ref|XP_003455436.1| PREDICTED: transcription factor Sox-6-like [Oreochromis niloticus]
Length = 794
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 33/43 (76%)
Query: 11 KKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+ N+ HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 566 RNNSEPHIKRPMNAFMVWAKDERRKILQTFPDMHNSNISKILG 608
>gi|48375124|gb|AAT42231.1| transcription factor Sox 8 [Tetraodon nigroviridis]
Length = 462
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMRA--TKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 87 PVRGNGSLKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKALGKL 137
>gi|30179900|ref|NP_005977.2| transcription factor SOX-1 [Homo sapiens]
gi|206729896|sp|O00570.2|SOX1_HUMAN RecName: Full=Transcription factor SOX-1
gi|119629563|gb|EAX09158.1| SRY (sex determining region Y)-box 1 [Homo sapiens]
Length = 391
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 33/42 (78%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K N + +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 45 KANQDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 86
>gi|3982829|gb|AAC83687.1| HMG box factor SOX-13 [Homo sapiens]
Length = 890
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 33/43 (76%)
Query: 11 KKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+ N +HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 400 ESRNSSHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILG 442
>gi|403280864|ref|XP_003931928.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor SOX-9 [Saimiri
boliviensis boliviensis]
Length = 646
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 206 PVRVNGSSKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 256
>gi|355746007|gb|EHH50632.1| hypothetical protein EGM_01491 [Macaca fascicularis]
Length = 620
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 32/40 (80%)
Query: 14 NPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
N +HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 418 NSSHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILG 457
>gi|47226895|emb|CAG05787.1| unnamed protein product [Tetraodon nigroviridis]
Length = 343
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 2 GLYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
G P +K N +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 22 GQTGPNSGSKANQ-ERVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 72
>gi|254771200|gb|ACT82009.1| Sox9 [Lepidochelys olivacea]
Length = 486
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 92 PVRVNGSSKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 142
>gi|149485783|ref|XP_001506094.1| PREDICTED: transcription factor SOX-9 [Ornithorhynchus anatinus]
Length = 508
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 92 PVRVNGSSKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 142
>gi|7707826|dbj|BAA95427.1| sox9 alpha [Glandirana rugosa]
Length = 482
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 92 PVRVNGSSKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 142
>gi|395729153|ref|XP_002809620.2| PREDICTED: transcription factor SOX-13 isoform 1 [Pongo abelii]
Length = 489
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 32/40 (80%)
Query: 14 NPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
N +HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 287 NSSHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILG 326
>gi|395533083|ref|XP_003768593.1| PREDICTED: transcription factor SOX-9-like [Sarcophilus harrisii]
Length = 512
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 92 PVRVNGSSKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 142
>gi|355721296|gb|AES07215.1| SRY -box 13 [Mustela putorius furo]
Length = 617
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 32/40 (80%)
Query: 14 NPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
N +HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 416 NSSHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILG 455
>gi|326911964|ref|XP_003202325.1| PREDICTED: transcription factor SOX-10-like [Meleagris gallopavo]
Length = 367
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/51 (52%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 6 PMRATKKNNPN-HIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R N H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 85 PVRVNGSNKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 135
>gi|291402571|ref|XP_002717621.1| PREDICTED: SRY-box 13 [Oryctolagus cuniculus]
Length = 613
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 32/40 (80%)
Query: 14 NPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
N +HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 412 NSSHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILG 451
>gi|259013580|ref|NP_001158337.1| SRY-box containing gene 1a [Oryzias latipes]
gi|227336630|gb|ACP21262.1| SRY-box containing gene 1a [Oryzias latipes]
Length = 322
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 32/45 (71%)
Query: 9 ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K N +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 28 GGSKANQERVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 72
>gi|332248096|ref|XP_003273197.1| PREDICTED: transcription factor SOX-13 isoform 1 [Nomascus
leucogenys]
Length = 622
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 32/40 (80%)
Query: 14 NPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
N +HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 420 NSSHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILG 459
>gi|328698811|ref|XP_001951971.2| PREDICTED: hypothetical protein LOC100168120 [Acyrthosiphon pisum]
Length = 965
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 35/47 (74%), Gaps = 1/47 (2%)
Query: 7 MRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+R KK+ HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 787 IRQQKKDG-EHIKRPMNAFMVWAKDERRKILKACPDMHNSNISKILG 832
>gi|109018740|ref|XP_001099185.1| PREDICTED: transcription factor SOX-13 isoform 2 [Macaca mulatta]
gi|297281010|ref|XP_002802011.1| PREDICTED: transcription factor SOX-13 [Macaca mulatta]
gi|402857518|ref|XP_003893300.1| PREDICTED: transcription factor SOX-13 isoform 1 [Papio anubis]
gi|402857520|ref|XP_003893301.1| PREDICTED: transcription factor SOX-13 isoform 2 [Papio anubis]
Length = 621
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 32/40 (80%)
Query: 14 NPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
N +HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 419 NSSHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILG 458
>gi|384950498|gb|AFI38854.1| transcription factor SOX-13 [Macaca mulatta]
Length = 621
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 32/40 (80%)
Query: 14 NPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
N +HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 419 NSSHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILG 458
>gi|297281012|ref|XP_002802012.1| PREDICTED: transcription factor SOX-13 [Macaca mulatta]
gi|402857524|ref|XP_003893303.1| PREDICTED: transcription factor SOX-13 isoform 4 [Papio anubis]
Length = 489
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 32/40 (80%)
Query: 14 NPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
N +HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 287 NSSHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILG 326
>gi|84871724|dbj|BAD11369.2| Sox3 [Danio rerio]
Length = 300
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 33/41 (80%)
Query: 13 NNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
N+ + +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 30 NDQDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 70
>gi|402857522|ref|XP_003893302.1| PREDICTED: transcription factor SOX-13 isoform 3 [Papio anubis]
Length = 716
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 32/40 (80%)
Query: 14 NPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
N +HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 514 NSSHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILG 553
>gi|332811692|ref|XP_003308750.1| PREDICTED: transcription factor SOX-13 isoform 1 [Pan troglodytes]
gi|397504917|ref|XP_003823025.1| PREDICTED: transcription factor SOX-13 isoform 3 [Pan paniscus]
Length = 489
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 32/40 (80%)
Query: 14 NPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
N +HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 287 NSSHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILG 326
>gi|332248098|ref|XP_003273198.1| PREDICTED: transcription factor SOX-13 isoform 2 [Nomascus
leucogenys]
Length = 633
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 32/40 (80%)
Query: 14 NPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
N +HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 431 NSSHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILG 470
>gi|194377750|dbj|BAG63238.1| unnamed protein product [Homo sapiens]
Length = 489
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 32/40 (80%)
Query: 14 NPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
N +HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 287 NSSHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILG 326
>gi|348530902|ref|XP_003452949.1| PREDICTED: transcription factor Sox-1a-like [Oreochromis
niloticus]
Length = 344
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 32/42 (76%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K N +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 31 KANQERVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 72
>gi|297281008|ref|XP_001099085.2| PREDICTED: transcription factor SOX-13 isoform 1 [Macaca mulatta]
Length = 716
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 32/40 (80%)
Query: 14 NPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
N +HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 514 NSSHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILG 553
>gi|4323171|gb|AAD16237.1| type 1 diabetes autoantigen ICA12 [Homo sapiens]
Length = 622
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 32/40 (80%)
Query: 14 NPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
N +HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 420 NSSHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILG 459
>gi|5737840|gb|AAD50120.1| SOX13 [Homo sapiens]
Length = 622
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 32/40 (80%)
Query: 14 NPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
N +HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 420 NSSHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILG 459
>gi|85060504|ref|NP_001001811.2| transcription factor Sox-3 [Danio rerio]
gi|82183737|sp|Q6EJB7.1|SOX3_DANRE RecName: Full=Transcription factor Sox-3
gi|32331001|gb|AAP79985.1| Sox3 [Danio rerio]
gi|62202228|gb|AAH92845.1| SRY-box containing gene 3 [Danio rerio]
gi|82568658|dbj|BAE48584.1| transcription factor SOX3 [Danio rerio]
gi|160773677|gb|AAI55139.1| SRY-box containing gene 3 [Danio rerio]
Length = 300
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 33/41 (80%)
Query: 13 NNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
N+ + +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 30 NDQDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 70
>gi|198246581|gb|ACH82241.1| sox11b [Bombina maxima]
Length = 71
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/34 (76%), Positives = 30/34 (88%)
Query: 20 RPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
RPMNAF+VWS++ERRK+ E PDMHNAEISKRL
Sbjct: 1 RPMNAFIVWSKIERRKVMEQSPDMHNAEISKRLG 34
>gi|269994370|dbj|BAI50349.1| SRY-box 9 [Leiolepis reevesii rubritaeniata]
Length = 200
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 7 PVRVNGSSKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 57
>gi|194388334|dbj|BAG65551.1| unnamed protein product [Homo sapiens]
Length = 489
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 32/40 (80%)
Query: 14 NPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
N +HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 287 NSSHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILG 326
>gi|397504913|ref|XP_003823023.1| PREDICTED: transcription factor SOX-13 isoform 1 [Pan paniscus]
gi|410220546|gb|JAA07492.1| SRY (sex determining region Y)-box 13 [Pan troglodytes]
gi|410303952|gb|JAA30576.1| SRY (sex determining region Y)-box 13 [Pan troglodytes]
Length = 622
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 32/40 (80%)
Query: 14 NPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
N +HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 420 NSSHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILG 459
>gi|426333393|ref|XP_004028262.1| PREDICTED: transcription factor SOX-13 isoform 1 [Gorilla gorilla
gorilla]
Length = 622
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 32/40 (80%)
Query: 14 NPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
N +HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 420 NSSHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILG 459
>gi|387019081|gb|AFJ51658.1| Transcription factor SOX-10-like [Crotalus adamanteus]
Length = 461
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/52 (53%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + K+ P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 85 PVRVNGSSKSKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 135
>gi|348520820|ref|XP_003447925.1| PREDICTED: transcription factor SOX-10-like [Oreochromis niloticus]
Length = 500
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/51 (52%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 6 PMRATKKNNPN-HIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R N H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 96 PVRVNNGNKAKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 146
>gi|332811694|ref|XP_003308751.1| PREDICTED: transcription factor SOX-13 isoform 2 [Pan troglodytes]
gi|397504919|ref|XP_003823026.1| PREDICTED: transcription factor SOX-13 isoform 4 [Pan paniscus]
Length = 489
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 32/40 (80%)
Query: 14 NPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
N +HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 287 NSSHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILG 326
>gi|194385390|dbj|BAG65072.1| unnamed protein product [Homo sapiens]
Length = 633
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 32/40 (80%)
Query: 14 NPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
N +HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 431 NSSHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILG 470
>gi|41406089|ref|NP_005677.2| transcription factor SOX-13 [Homo sapiens]
gi|288558840|sp|Q9UN79.3|SOX13_HUMAN RecName: Full=Transcription factor SOX-13; AltName: Full=Islet cell
antigen 12; AltName: Full=SRY (Sex determining region
Y)-box 13; AltName: Full=Type 1 diabetes autoantigen
ICA12
gi|77415421|gb|AAI06039.1| SRY (sex determining region Y)-box 13 [Homo sapiens]
gi|119611906|gb|EAW91500.1| SRY (sex determining region Y)-box 13, isoform CRA_b [Homo sapiens]
gi|167773571|gb|ABZ92220.1| SRY (sex determining region Y)-box 13 [synthetic construct]
gi|306921297|dbj|BAJ17728.1| SRY (sex determining region Y)-box 13 [synthetic construct]
Length = 622
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 32/40 (80%)
Query: 14 NPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
N +HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 420 NSSHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILG 459
>gi|426333395|ref|XP_004028263.1| PREDICTED: transcription factor SOX-13 isoform 2 [Gorilla gorilla
gorilla]
Length = 489
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 32/40 (80%)
Query: 14 NPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
N +HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 287 NSSHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILG 326
>gi|332811690|ref|XP_514121.3| PREDICTED: transcription factor SOX-13 isoform 3 [Pan troglodytes]
gi|397504915|ref|XP_003823024.1| PREDICTED: transcription factor SOX-13 isoform 2 [Pan paniscus]
Length = 633
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 32/40 (80%)
Query: 14 NPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
N +HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 431 NSSHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILG 470
>gi|326672150|ref|XP_002667667.2| PREDICTED: transcription factor SOX-8-like [Danio rerio]
Length = 401
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 38/52 (73%), Gaps = 3/52 (5%)
Query: 6 PMRATK--KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
PM+ ++ K+ P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 73 PMQGSRSLKDKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 123
>gi|432859402|ref|XP_004069090.1| PREDICTED: transcription factor SOX-13 [Oryzias latipes]
Length = 620
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 36/52 (69%), Gaps = 2/52 (3%)
Query: 2 GLYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
G Y+ R T + HIKRPMNAFMVW++ ERR+I + PDMHN+ ISK L
Sbjct: 410 GGYAEPRPTPSSG--HIKRPMNAFMVWAKDERRRILQAFPDMHNSSISKILG 459
>gi|11526785|gb|AAG36779.1| Sox9 [Eublepharis macularius]
Length = 490
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 88 PVRVNGSSKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 138
>gi|47550927|ref|NP_999637.1| transcription factor SoxD1 [Strongylocentrotus purpuratus]
gi|5163494|gb|AAD40686.1|AF157387_1 transcription factor SoxD1 [Strongylocentrotus purpuratus]
Length = 220
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R + + P HIKRPMNAFMVW++ ERRKI PDMHN+ ISK L
Sbjct: 44 MYRDSRKAEASKP-HIKRPMNAFMVWAKEERRKILARHPDMHNSNISKILG 93
>gi|322786681|gb|EFZ13065.1| hypothetical protein SINV_12071 [Solenopsis invicta]
Length = 70
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/37 (70%), Positives = 31/37 (83%)
Query: 17 HIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
HIKRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 12 HIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 48
>gi|147902848|ref|NP_001087942.1| transcription factor Sox-9-B [Xenopus laevis]
gi|82182873|sp|Q6DFF5.1|SOX9B_XENLA RecName: Full=Transcription factor Sox-9-B
gi|49904068|gb|AAH76783.1| Sox9b protein [Xenopus laevis]
gi|189339119|dbj|BAG48176.1| transcription factor Sox9b [Xenopus laevis]
gi|387860564|gb|AFK08429.1| sex determining region Y-box 9 [Xenopus laevis]
Length = 476
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 92 PVRVNGSSKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 142
>gi|339241615|ref|XP_003376733.1| putative HMG box [Trichinella spiralis]
gi|316974536|gb|EFV58022.1| putative HMG box [Trichinella spiralis]
Length = 587
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 33/40 (82%)
Query: 14 NPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+P+HIKRPMNAFMVW++ ERRK+ + PDMHN+ ISK L
Sbjct: 409 SPDHIKRPMNAFMVWARDERRKMLKSCPDMHNSNISKILG 448
>gi|410928377|ref|XP_003977577.1| PREDICTED: transcription factor SOX-5-like [Takifugu rubripes]
Length = 789
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/37 (70%), Positives = 30/37 (81%)
Query: 17 HIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 583 HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 619
>gi|395838798|ref|XP_003792293.1| PREDICTED: transcription factor SOX-13 isoform 1 [Otolemur
garnettii]
Length = 468
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 32/40 (80%)
Query: 14 NPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
N +HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 266 NSSHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILG 305
>gi|6689861|gb|AAF23875.1|AF116571_1 SRY-like DNA binding protein [Homo sapiens]
Length = 604
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 32/40 (80%)
Query: 14 NPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
N +HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 402 NSSHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILG 441
>gi|47225311|emb|CAG09811.1| unnamed protein product [Tetraodon nigroviridis]
Length = 295
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 35/49 (71%)
Query: 5 SPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+P +N + +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 17 APGGKNNSSNEDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 65
>gi|47218285|emb|CAF96322.1| unnamed protein product [Tetraodon nigroviridis]
Length = 916
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/37 (70%), Positives = 30/37 (81%)
Query: 17 HIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 612 HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 648
>gi|386783747|gb|AFJ24768.1| soxP-5, partial [Schmidtea mediterranea]
Length = 343
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/42 (64%), Positives = 32/42 (76%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+N NH+KRPMNAFMVWS+ ER KI + PDMHN+ ISK L
Sbjct: 136 ENRTNHVKRPMNAFMVWSREERSKILKACPDMHNSNISKLLG 177
>gi|126308526|ref|XP_001370056.1| PREDICTED: transcription factor SOX-9 [Monodelphis domestica]
Length = 512
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 92 PVRVNGSSKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 142
>gi|18859397|ref|NP_571950.1| transcription factor SOX-10 [Danio rerio]
gi|15148890|gb|AAK84872.1|AF402677_1 HMG-box transcription factor Sox10 [Danio rerio]
gi|190340062|gb|AAI63868.1| Sox10 protein [Danio rerio]
gi|190340266|gb|AAI63883.1| Sox10 protein [Danio rerio]
Length = 485
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/52 (53%), Positives = 36/52 (69%), Gaps = 3/52 (5%)
Query: 6 PMRATK--KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R K+ P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 95 PVRVNSGSKSKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 145
>gi|340373538|ref|XP_003385298.1| PREDICTED: hypothetical protein LOC100633718 [Amphimedon
queenslandica]
gi|167859593|gb|ACA04751.1| SoxF-like [Amphimedon queenslandica]
Length = 348
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/36 (66%), Positives = 31/36 (86%)
Query: 18 IKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
IKRPMNAFMVWS +ER+K+ E +P++HN E+SKRL
Sbjct: 62 IKRPMNAFMVWSSLERKKLAEKEPNLHNTELSKRLG 97
>gi|4099267|gb|AAD00563.1| transcriptional regulator Sox-21 [Danio rerio]
Length = 239
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 31/38 (81%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+H+KRPMNAFMVWS+ +RRK+ P MHN+EISKRL
Sbjct: 6 DHVKRPMNAFMVWSRAQRRKMALDNPKMHNSEISKRLG 43
>gi|114154450|gb|ABI53381.1| transcription factor SoxB2 [Strongylocentrotus droebachiensis]
Length = 268
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 31/38 (81%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+H+KRPMNAFM WS+ +RRK+ + P MHN+EISKRL
Sbjct: 12 DHVKRPMNAFMAWSRGQRRKLAQENPKMHNSEISKRLG 49
>gi|18859405|ref|NP_571361.1| transcription factor Sox-21-A [Danio rerio]
gi|6448790|gb|AAF08682.1|AF101266_1 DNA binding protein [Danio rerio]
Length = 239
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 31/38 (81%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+H+KRPMNAFMVWS+ +RRK+ P MHN+EISKRL
Sbjct: 6 DHVKRPMNAFMVWSRAQRRKMALDNPKMHNSEISKRLG 43
>gi|410920639|ref|XP_003973791.1| PREDICTED: transcription factor SOX-13-like [Takifugu rubripes]
Length = 637
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 36/52 (69%), Gaps = 2/52 (3%)
Query: 2 GLYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
G YS R + + HIKRPMNAFMVW++ ERR+I + PDMHN+ ISK L
Sbjct: 420 GSYSGPRPSPSSG--HIKRPMNAFMVWAKDERRRILQAFPDMHNSSISKILG 469
>gi|82188001|sp|Q7SZS1.1|SX21A_DANRE RecName: Full=Transcription factor Sox-21-A; AltName:
Full=SRY-box containing gene 21a
gi|33604114|gb|AAH56274.1| SRY-box containing gene 21a [Danio rerio]
gi|41351109|gb|AAH65639.1| SRY-box containing gene 21a [Danio rerio]
Length = 239
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 31/38 (81%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+H+KRPMNAFMVWS+ +RRK+ P MHN+EISKRL
Sbjct: 6 DHVKRPMNAFMVWSRAQRRKMALDNPKMHNSEISKRLG 43
>gi|297274827|ref|XP_001097044.2| PREDICTED: hypothetical protein LOC708561 [Macaca mulatta]
Length = 472
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 33/42 (78%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K N + +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 46 KANQDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 87
>gi|224095200|ref|XP_002198867.1| PREDICTED: transcription factor SOX-10 [Taeniopygia guttata]
Length = 463
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/51 (52%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 6 PMRATKKNNPN-HIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R N H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 85 PVRVNGSNKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 135
>gi|190339896|gb|AAI63449.1| SRY-box containing gene 5 [Danio rerio]
Length = 759
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/37 (70%), Positives = 30/37 (81%)
Query: 17 HIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 557 HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 593
>gi|334349640|ref|XP_001381534.2| PREDICTED: transcription factor SOX-10, partial [Monodelphis
domestica]
Length = 608
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/52 (53%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + K+ P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 232 PVRVNGSSKSKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 282
>gi|18859409|ref|NP_571718.1| transcription factor SOX-9 [Danio rerio]
gi|9964081|gb|AAG09814.1|AF277096_1 HMG box transcription factor Sox9a [Danio rerio]
gi|24429611|gb|AAM13695.1| transcription factor sox9a [Danio rerio]
gi|24429613|gb|AAM13696.1| transcription factor sox9a [Danio rerio]
Length = 462
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 94 PVRVNGSSKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 144
>gi|47213805|emb|CAF92578.1| unnamed protein product [Tetraodon nigroviridis]
Length = 502
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/51 (52%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 6 PMRATKKNNPN-HIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R N H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 96 PVRVNNGNKAKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 146
>gi|42543139|pdb|1O4X|B Chain B, Ternary Complex Of The Dna Binding Domains Of The Oct1
And Sox2 Transcription Factors With A 19mer
Oligonucleotide From The Hoxb1 Regulatory Element
Length = 88
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 32/39 (82%)
Query: 15 PNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
P+ +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 5 PDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 43
>gi|380704399|gb|AFD97051.1| SOX10 [Paramisgurnus dabryanus]
Length = 492
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/52 (53%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + K+ P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 95 PVRVDSGSKSKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 145
>gi|301757506|ref|XP_002914621.1| PREDICTED: transcription factor SOX-10-like [Ailuropoda
melanoleuca]
Length = 522
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/52 (53%), Positives = 36/52 (69%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R K+ P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 147 PVRVNGASKSKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 197
>gi|159024075|gb|ABW87298.1| transcription factor Sox10 [Cynoglossus semilaevis]
Length = 456
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/39 (61%), Positives = 30/39 (76%)
Query: 17 HIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 101 HVKRPMNAFMVWAQAARRKLADQHPHLHNAELSKTLGKL 139
>gi|114154482|gb|ABI53397.1| transcription factor SoxB2 [Strongylocentrotus pallidus]
Length = 267
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 31/38 (81%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+H+KRPMNAFMVWS+ +RRK+ + P MHN+E SKRL
Sbjct: 12 DHVKRPMNAFMVWSRGQRRKLAQENPKMHNSETSKRLG 49
>gi|189237171|ref|XP_974496.2| PREDICTED: similar to transcription factor SOX-19 [Tribolium
castaneum]
Length = 382
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/43 (60%), Positives = 32/43 (74%)
Query: 11 KKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K N +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 75 KSQNMERVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 117
>gi|115394120|gb|ABI97016.1| Sry-type HMG box 10 [Ambystoma mexicanum]
Length = 447
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/52 (53%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + K+ P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 83 PVRVNGSSKSKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 133
>gi|410932201|ref|XP_003979482.1| PREDICTED: transcription factor Sox-3-like [Takifugu rubripes]
Length = 299
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 35/49 (71%)
Query: 5 SPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+P +N + +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 21 APGGKNNSSNEDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 69
>gi|348578173|ref|XP_003474858.1| PREDICTED: transcription factor SOX-13-like [Cavia porcellus]
Length = 615
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/42 (66%), Positives = 34/42 (80%), Gaps = 1/42 (2%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+NN +HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 412 RNN-SHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILG 452
>gi|148690141|gb|EDL22088.1| SRY-box containing gene 1 [Mus musculus]
Length = 336
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 33/42 (78%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K N + +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 39 KANQDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 80
>gi|33415958|gb|AAQ18516.1| transcription factor Sox5 [Takifugu rubripes]
Length = 759
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/37 (70%), Positives = 30/37 (81%)
Query: 17 HIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 553 HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 589
>gi|57113943|ref|NP_001009029.1| transcription factor SOX-9 [Pan troglodytes]
gi|38503365|sp|Q9BG89.1|SOX9_PANTR RecName: Full=Transcription factor SOX-9
gi|12698712|gb|AAK01653.1| SOX9 [Pan troglodytes]
Length = 509
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 92 PVRVNGSSKNKP-HVKRPMNAFMVWAQAARRKLGDQYPHLHNAELSKTLGKL 142
>gi|440906518|gb|ELR56771.1| Transcription factor SOX-10, partial [Bos grunniens mutus]
Length = 427
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/52 (53%), Positives = 36/52 (69%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R K+ P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 52 PVRVNGASKSKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 102
>gi|158298957|ref|XP_319093.4| AGAP009957-PA [Anopheles gambiae str. PEST]
gi|157014137|gb|EAA13970.5| AGAP009957-PA [Anopheles gambiae str. PEST]
Length = 333
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 32/42 (76%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+ N + +KRPMNAFMVWS+ +RRK+ P MHN+EISKRL
Sbjct: 19 QQNADRVKRPMNAFMVWSRGQRRKMASDNPKMHNSEISKRLG 60
>gi|2826523|gb|AAB99738.1| putative transcription factor [Mus musculus]
Length = 582
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/52 (53%), Positives = 36/52 (69%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R K+ P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 207 PVRVNGASKSKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 257
>gi|30047227|gb|AAH51058.1| Sox10 protein, partial [Mus musculus]
Length = 506
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/52 (53%), Positives = 36/52 (69%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R K+ P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 131 PVRVNGASKSKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 181
>gi|83657495|gb|ABC40396.1| SRY-box containing gene 11 [Hiodon alosoides]
Length = 297
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/32 (81%), Positives = 28/32 (87%)
Query: 22 MNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
MNAFMVWS++ERRKI E PDMHNAEISKRL
Sbjct: 1 MNAFMVWSKIERRKIMEQSPDMHNAEISKRLG 32
>gi|381141859|gb|AFF57871.1| Sox8a [Epinephelus coioides]
gi|381141863|gb|AFF57873.1| Sox8a [Epinephelus coioides]
Length = 468
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMRA--TKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 87 PVRGNGSLKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 137
>gi|227336648|gb|ACP21271.1| SRY-box containing gene 13 [Oryzias latipes]
Length = 625
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 36/52 (69%), Gaps = 2/52 (3%)
Query: 2 GLYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
G Y+ R T + HIKRPMNAFMVW++ ERR+I + PDMHN+ ISK L
Sbjct: 474 GGYAEPRPTPSSG--HIKRPMNAFMVWAKDERRRILQAFPDMHNSSISKILG 523
>gi|58223366|gb|AAW69293.1| HMG box transcription factor Sox9b [Carassius auratus x Cyprinus
carpio]
Length = 416
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 82 PVRVNGSTKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 132
>gi|62205311|gb|AAH93134.1| Sox9a protein [Danio rerio]
Length = 247
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 94 PVRVNGSSKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 144
>gi|148672721|gb|EDL04668.1| mCG13137 [Mus musculus]
Length = 569
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/52 (53%), Positives = 36/52 (69%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R K+ P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 194 PVRVNGASKSKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 244
>gi|410925256|ref|XP_003976097.1| PREDICTED: transcription factor SOX-10-like isoform 1 [Takifugu
rubripes]
gi|33415944|gb|AAQ18509.1| transcription factor Sox10a [Takifugu rubripes]
Length = 500
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/51 (52%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 6 PMRATKKNNPN-HIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R N H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 96 PVRVNNGNKAKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 146
>gi|410925258|ref|XP_003976098.1| PREDICTED: transcription factor SOX-10-like isoform 2 [Takifugu
rubripes]
Length = 493
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/51 (52%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 6 PMRATKKNNPN-HIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R N H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 96 PVRVNNGNKAKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 146
>gi|270008206|gb|EFA04654.1| SoxNeuro [Tribolium castaneum]
Length = 336
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/43 (60%), Positives = 32/43 (74%)
Query: 11 KKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K N +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 75 KSQNMERVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 117
>gi|51512413|gb|AAU05404.1| Sox9a2 [Tachysurus fulvidraco]
Length = 226
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 36/52 (69%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 9 PVRVHGASKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 59
>gi|196016573|ref|XP_002118138.1| hypothetical protein TRIADDRAFT_17959 [Trichoplax adhaerens]
gi|190579264|gb|EDV19363.1| hypothetical protein TRIADDRAFT_17959 [Trichoplax adhaerens]
Length = 93
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/42 (69%), Positives = 32/42 (76%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K N HIKRPMNAF+VWS+ +RRKI E P MHNAEISK L
Sbjct: 2 KQNCYHIKRPMNAFIVWSKEQRRKIAEENPKMHNAEISKILG 43
>gi|24429615|gb|AAM13697.1| mutant transcription factor sox9a [Danio rerio]
Length = 146
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 94 PVRVNGSSKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 144
>gi|45382163|ref|NP_990123.1| transcription factor SOX-10 [Gallus gallus]
gi|11135387|sp|Q9W757.2|SOX10_CHICK RecName: Full=Transcription factor SOX-10; Short=cSOX10
gi|6760469|gb|AAD38050.2|AF152356_1 Sox10 protein [Gallus gallus]
gi|6687638|emb|CAB65026.1| Sry-boxntranscription factor, SOX-10 [Gallus gallus]
Length = 461
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/51 (52%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 6 PMRATKKNNPN-HIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R N H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 85 PVRVNGSNKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 135
>gi|300794903|ref|NP_001180176.1| transcription factor SOX-10 [Bos taurus]
gi|296487027|tpg|DAA29140.1| TPA: SRY (sex determining region Y)-box 10 [Bos taurus]
Length = 469
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/52 (53%), Positives = 36/52 (69%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R K+ P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 94 PVRVNGASKSKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 144
>gi|165881948|gb|ABY71240.1| Sox9 [Leucoraja erinacea]
Length = 338
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 15 PVRVNGSSKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 65
>gi|431905191|gb|ELK10238.1| Transcription factor SOX-10 [Pteropus alecto]
Length = 477
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/52 (53%), Positives = 36/52 (69%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R K+ P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 92 PVRVNGASKSKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 142
>gi|345777055|ref|XP_538379.3| PREDICTED: transcription factor SOX-10 [Canis lupus familiaris]
Length = 468
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/52 (53%), Positives = 36/52 (69%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R K+ P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 93 PVRVNGASKSKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 143
>gi|344296240|ref|XP_003419817.1| PREDICTED: transcription factor SOX-10 [Loxodonta africana]
Length = 466
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/52 (53%), Positives = 36/52 (69%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R K+ P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 91 PVRVNGASKSKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 141
>gi|195364277|gb|ACF95883.1| SOX9 [Pleurodeles waltl]
Length = 479
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 93 PVRVNGSSKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 143
>gi|149065946|gb|EDM15819.1| SRY-box containing gene 10, isoform CRA_a [Rattus norvegicus]
gi|149065947|gb|EDM15820.1| SRY-box containing gene 10, isoform CRA_a [Rattus norvegicus]
Length = 488
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/52 (53%), Positives = 36/52 (69%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R K+ P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 113 PVRVNGASKSKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 163
>gi|26335595|dbj|BAC31498.1| unnamed protein product [Mus musculus]
Length = 466
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/52 (53%), Positives = 36/52 (69%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R K+ P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 91 PVRVNGASKSKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 141
>gi|226423937|ref|NP_035567.1| transcription factor SOX-10 [Mus musculus]
gi|6175076|sp|Q04888.2|SOX10_MOUSE RecName: Full=Transcription factor SOX-10; AltName: Full=Protein
SOX-21; AltName: Full=Transcription factor SOX-M
gi|3264586|gb|AAC24564.1| Sox-10 protein [Mus musculus]
gi|17391312|gb|AAH18551.1| Sox10 protein [Mus musculus]
gi|19263797|gb|AAH25171.1| Sox10 protein [Mus musculus]
gi|19484028|gb|AAH23356.1| Sox10 protein [Mus musculus]
Length = 466
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/52 (53%), Positives = 36/52 (69%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R K+ P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 91 PVRVNGASKSKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 141
>gi|426239331|ref|XP_004013576.1| PREDICTED: transcription factor SOX-9 [Ovis aries]
Length = 308
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 9 ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
+ KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 105 GSSKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 150
>gi|355568875|gb|EHH25156.1| hypothetical protein EGK_08928, partial [Macaca mulatta]
Length = 356
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 3 PVRVNGSSKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 53
>gi|195402311|ref|XP_002059750.1| GJ16151 [Drosophila virilis]
gi|194155964|gb|EDW71148.1| GJ16151 [Drosophila virilis]
Length = 669
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 34/48 (70%)
Query: 6 PMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
P R ++ HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 454 PQRHGHGHSKPHIKRPMNAFMVWAKDERRKILKACPDMHNSNISKILG 501
>gi|84380305|gb|ABC58685.1| HMG box protein SoxE3 [Petromyzon marinus]
Length = 539
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/52 (53%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + K+ P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 116 PVRVNGSSKSKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 166
>gi|308470865|ref|XP_003097665.1| hypothetical protein CRE_14849 [Caenorhabditis remanei]
gi|308239966|gb|EFO83918.1| hypothetical protein CRE_14849 [Caenorhabditis remanei]
Length = 271
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 35/49 (71%), Gaps = 3/49 (6%)
Query: 5 SPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+P R KK+ H+KRP+NAFM+WS+ ERRKI + PD HN+ ISK L
Sbjct: 136 TPARLKKKD---HVKRPLNAFMIWSRQERRKITDSYPDCHNSTISKLLG 181
>gi|157104969|ref|XP_001648654.1| sex-determining region y protein, sry [Aedes aegypti]
gi|108884146|gb|EAT48371.1| AAEL000584-PA [Aedes aegypti]
Length = 464
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 31/40 (77%)
Query: 14 NPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
N + +KRPMNAFMVWS+ +RRK+ P MHN+EISKRL
Sbjct: 143 NADRVKRPMNAFMVWSRGQRRKMASDNPKMHNSEISKRLG 182
>gi|402578315|gb|EJW72269.1| HMG box family protein, partial [Wuchereria bancrofti]
Length = 367
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 31/38 (81%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+ +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 126 DRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 163
>gi|91083763|ref|XP_971910.1| PREDICTED: similar to Sox21a CG7345-PA [Tribolium castaneum]
gi|270008131|gb|EFA04579.1| Sox21a [Tribolium castaneum]
Length = 242
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/37 (70%), Positives = 31/37 (83%)
Query: 17 HIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
HIKRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 13 HIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 49
>gi|383857369|ref|XP_003704177.1| PREDICTED: transcription factor SOX-2-like [Megachile rotundata]
Length = 467
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 24/38 (63%), Positives = 31/38 (81%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+ +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 140 DRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 177
>gi|363412422|gb|AEW22999.1| transcription factor SOX12 [Columba livia]
Length = 71
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/35 (80%), Positives = 29/35 (82%)
Query: 19 KRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
KRPMNAFMVW Q ERRKI + PDMHNAEISKRL
Sbjct: 1 KRPMNAFMVWLQHERRKIMDQWPDMHNAEISKRLG 35
>gi|348515211|ref|XP_003445133.1| PREDICTED: transcription factor SOX-5-like [Oreochromis niloticus]
Length = 901
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/37 (70%), Positives = 30/37 (81%)
Query: 17 HIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 695 HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 731
>gi|339253074|ref|XP_003371760.1| putative HMG box [Trichinella spiralis]
gi|316967942|gb|EFV52295.1| putative HMG box [Trichinella spiralis]
Length = 1143
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 38/48 (79%), Gaps = 1/48 (2%)
Query: 9 ATK-KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
ATK + +P+ IKRPMN+FMVW+Q +RR++ + P+MHNAE+SK L L
Sbjct: 27 ATKCRRSPDRIKRPMNSFMVWAQAQRRQVKTILPEMHNAEVSKWLGKL 74
>gi|263359663|gb|ACY70499.1| hypothetical protein DVIR88_6g0036 [Drosophila virilis]
Length = 690
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 34/48 (70%)
Query: 6 PMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
P R ++ HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 475 PQRHGHGHSKPHIKRPMNAFMVWAKDERRKILKACPDMHNSNISKILG 522
>gi|51599119|gb|AAU08210.1| transcription factor Sox9 [Acipenser schrenckii]
Length = 245
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 6 PMR--ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALL 55
P+R + KN P H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK L L
Sbjct: 95 PVRVNGSSKNKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 145
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.322 0.132 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,131,078,932
Number of Sequences: 23463169
Number of extensions: 32098149
Number of successful extensions: 62016
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2847
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 59125
Number of HSP's gapped (non-prelim): 2905
length of query: 74
length of database: 8,064,228,071
effective HSP length: 45
effective length of query: 29
effective length of database: 7,008,385,466
effective search space: 203243178514
effective search space used: 203243178514
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 69 (31.2 bits)