BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5107
(74 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P40656|SOX14_DROME Putative transcription factor SOX-14 OS=Drosophila melanogaster
GN=Sox14 PE=2 SV=3
Length = 669
Score = 85.1 bits (209), Expect = 1e-16, Method: Composition-based stats.
Identities = 38/50 (76%), Positives = 41/50 (82%)
Query: 4 YSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
YS TKK++P HIKRPMNAFMVWSQMERRKICE PD+HNAEISK L
Sbjct: 173 YSDATRTKKHSPGHIKRPMNAFMVWSQMERRKICERTPDLHNAEISKELG 222
>sp|Q06831|SOX4_MOUSE Transcription factor SOX-4 OS=Mus musculus GN=Sox4 PE=1 SV=2
Length = 440
Score = 74.3 bits (181), Expect = 2e-13, Method: Composition-based stats.
Identities = 33/42 (78%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWSQ+ERRKI E PDMHNAEISKRL
Sbjct: 53 KTPSGHIKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLG 94
>sp|Q06945|SOX4_HUMAN Transcription factor SOX-4 OS=Homo sapiens GN=SOX4 PE=1 SV=1
Length = 474
Score = 73.6 bits (179), Expect = 4e-13, Method: Composition-based stats.
Identities = 33/42 (78%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWSQ+ERRKI E PDMHNAEISKRL
Sbjct: 53 KTPSGHIKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLG 94
>sp|P35716|SOX11_HUMAN Transcription factor SOX-11 OS=Homo sapiens GN=SOX11 PE=1 SV=2
Length = 441
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWS++ERRKI E PDMHNAEISKRL
Sbjct: 43 KTASGHIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLG 84
>sp|P40650|SX11B_XENLA Transcription factor Sox-11-B OS=Xenopus laevis GN=sox11-b PE=1
SV=2
Length = 374
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWS++ERRKI E PDMHNAEISKRL
Sbjct: 39 KTATGHIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLG 80
>sp|P48435|SOX11_CHICK Transcription factor SOX-11 OS=Gallus gallus GN=SOX11 PE=2 SV=1
Length = 396
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWS++ERRKI E PDMHNAEISKRL
Sbjct: 43 KTASGHIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLG 84
>sp|Q91731|SX11A_XENLA Transcription factor Sox-11-A OS=Xenopus laevis GN=sox11-a PE=1
SV=2
Length = 382
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWS++ERRKI E PDMHNAEISKRL
Sbjct: 41 KTATGHIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLG 82
>sp|P0C1G9|SOX11_RAT Transcription factor SOX-11 OS=Rattus norvegicus GN=Sox11 PE=2
SV=1
Length = 395
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWS++ERRKI E PDMHNAEISKRL
Sbjct: 43 KTASGHIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLG 84
>sp|Q7M6Y2|SOX11_MOUSE Transcription factor SOX-11 OS=Mus musculus GN=Sox11 PE=1 SV=1
Length = 395
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWS++ERRKI E PDMHNAEISKRL
Sbjct: 43 KTASGHIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLG 84
>sp|Q66JF1|SOX11_XENTR Transcription factor Sox-11 OS=Xenopus tropicalis GN=sox11 PE=2
SV=1
Length = 383
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWS++ERRKI E PDMHNAEISKRL
Sbjct: 42 KTATGHIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLG 83
>sp|Q04890|SOX12_MOUSE Transcription factor SOX-12 OS=Mus musculus GN=Sox12 PE=2 SV=2
Length = 314
Score = 68.2 bits (165), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/42 (76%), Positives = 33/42 (78%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWSQ ERRKI + PDMHNAEISKRL
Sbjct: 34 KTPSGHIKRPMNAFMVWSQHERRKIMDQWPDMHNAEISKRLG 75
>sp|O15370|SOX12_HUMAN Transcription factor SOX-12 OS=Homo sapiens GN=SOX12 PE=2 SV=2
Length = 315
Score = 68.2 bits (165), Expect = 2e-11, Method: Composition-based stats.
Identities = 32/42 (76%), Positives = 33/42 (78%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K HIKRPMNAFMVWSQ ERRKI + PDMHNAEISKRL
Sbjct: 34 KTPSGHIKRPMNAFMVWSQHERRKIMDQWPDMHNAEISKRLG 75
>sp|P40637|AES1_ALLMI SRY-related protein AES1 (Fragment) OS=Alligator mississippiensis
PE=4 SV=1
Length = 72
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/36 (83%), Positives = 32/36 (88%)
Query: 18 IKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+KRPMNAFMVWSQ+ERRKI E PDMHNAEISKRL
Sbjct: 1 VKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLG 36
>sp|P40639|AES4_ALLMI SRY-related protein AES4 (Fragment) OS=Alligator mississippiensis
PE=4 SV=1
Length = 72
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/36 (83%), Positives = 32/36 (88%)
Query: 18 IKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+KRPMNAFMVWSQ+ERRKI E PDMHNAEISKRL
Sbjct: 1 VKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLG 36
>sp|Q6P0E1|SOX2_DANRE Transcription factor Sox-2 OS=Danio rerio GN=sox2 PE=2 SV=1
Length = 315
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 28/43 (65%), Positives = 36/43 (83%)
Query: 11 KKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+KN+P+ IKRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 31 QKNSPDRIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 73
>sp|P48430|SOX2_CHICK Transcription factor SOX-2 OS=Gallus gallus GN=SOX2 PE=1 SV=1
Length = 315
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 36/43 (83%)
Query: 11 KKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+KN+P+ +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 32 QKNSPDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 74
>sp|Q24533|DICH_DROME SOX domain-containing protein dichaete OS=Drosophila melanogaster
GN=D PE=2 SV=1
Length = 382
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 40/62 (64%), Gaps = 10/62 (16%)
Query: 9 ATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLALLSLYKSNGFNW-LL 67
AT HIKRPMNAFMVWS+++RR+I + P MHN+EISKRL G W LL
Sbjct: 133 ATSPGQEGHIKRPMNAFMVWSRLQRRQIAKDNPKMHNSEISKRL---------GAEWKLL 183
Query: 68 AE 69
AE
Sbjct: 184 AE 185
>sp|P48432|SOX2_MOUSE Transcription factor SOX-2 OS=Mus musculus GN=Sox2 PE=1 SV=2
Length = 319
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 36/43 (83%)
Query: 11 KKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+KN+P+ +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 36 QKNSPDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 78
>sp|P54231|SOX2_SHEEP Transcription factor SOX-2 OS=Ovis aries GN=SOX2 PE=3 SV=1
Length = 320
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 36/43 (83%)
Query: 11 KKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+KN+P+ +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 37 QKNSPDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 79
>sp|P48431|SOX2_HUMAN Transcription factor SOX-2 OS=Homo sapiens GN=SOX2 PE=1 SV=1
Length = 317
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 36/43 (83%)
Query: 11 KKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+KN+P+ +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 34 QKNSPDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 76
>sp|P40634|ADW2_ALLMI SRY-related protein ADW2 (Fragment) OS=Alligator mississippiensis
PE=4 SV=1
Length = 72
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/36 (80%), Positives = 31/36 (86%)
Query: 18 IKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+KRPMNAFMVWSQ ERRKI + PDMHNAEISKRL
Sbjct: 1 VKRPMNAFMVWSQHERRKIMDQWPDMHNAEISKRLG 36
>sp|P40636|ADW5_ALLMI SRY-related protein ADW5 (Fragment) OS=Alligator mississippiensis
PE=4 SV=2
Length = 72
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/36 (80%), Positives = 31/36 (86%)
Query: 18 IKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+KRPMNAFMVWSQ ERRKI + PDMHNAEISKRL
Sbjct: 1 VKRPMNAFMVWSQHERRKIMDQWPDMHNAEISKRLG 36
>sp|P40635|ADW4_ALLMI SRY-related protein ADW4 (Fragment) OS=Alligator mississippiensis
PE=4 SV=1
Length = 72
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/36 (80%), Positives = 31/36 (86%)
Query: 18 IKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+KRPMNAFMVWSQ ERRKI + PDMHNAEISKRL
Sbjct: 1 VKRPMNAFMVWSQHERRKIMDQWPDMHNAEISKRLG 36
>sp|P40654|LG27_EUBMA SRY-related protein LG27 (Fragment) OS=Eublepharis macularius
PE=4 SV=1
Length = 71
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/36 (80%), Positives = 31/36 (86%)
Query: 18 IKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+KRPMNAFMVWSQ ERRKI + PDMHNAEISKRL
Sbjct: 1 VKRPMNAFMVWSQNERRKIMDQWPDMHNAEISKRLG 36
>sp|P40655|LG28_EUBMA SRY-related protein LG28 (Fragment) OS=Eublepharis macularius
PE=4 SV=1
Length = 71
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/36 (80%), Positives = 31/36 (86%)
Query: 18 IKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+KRPMNAFMVWSQ ERRKI + PDMHNAEISKRL
Sbjct: 1 VKRPMNAFMVWSQNERRKIMDQWPDMHNAEISKRLG 36
>sp|P40651|MG42_TARMA SRY-related protein MG42 (Fragment) OS=Tarentola mauritanica PE=4
SV=1
Length = 72
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/36 (80%), Positives = 31/36 (86%)
Query: 18 IKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+KRPMNAFMVWSQ ERRKI + PDMHNAEISKRL
Sbjct: 1 VKRPMNAFMVWSQNERRKIMDQWPDMHNAEISKRLG 36
>sp|P40638|AES2_ALLMI SRY-related protein AES2 (Fragment) OS=Alligator mississippiensis
PE=4 SV=1
Length = 72
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/36 (80%), Positives = 31/36 (86%)
Query: 18 IKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+KRPMNAFMV SQ+ERRKI E PDMHNAEISKRL
Sbjct: 1 VKRPMNAFMVGSQIERRKIMEQSPDMHNAEISKRLG 36
>sp|P35711|SOX5_HUMAN Transcription factor SOX-5 OS=Homo sapiens GN=SOX5 PE=1 SV=3
Length = 763
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R N P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 542 IYRESRGRGSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 591
>sp|P40647|SOX5_XENLA Transcription factor Sox-5 OS=Xenopus laevis GN=sox5 PE=2 SV=2
Length = 757
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R N P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 545 IYREARGRGSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 594
>sp|P35710|SOX5_MOUSE Transcription factor SOX-5 OS=Mus musculus GN=Sox5 PE=1 SV=2
Length = 763
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R N P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 542 IYRESRGRGSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 591
>sp|Q8AXQ4|SOX12_XENLA Transcription factor Sox-12 OS=Xenopus laevis GN=sox12 PE=2 SV=1
Length = 244
Score = 62.4 bits (150), Expect = 9e-10, Method: Composition-based stats.
Identities = 27/42 (64%), Positives = 34/42 (80%)
Query: 12 KNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
K + HIKRPMNAFMVWSQ+ERRK+ + P+MHNA+IS+ L
Sbjct: 25 KTSNGHIKRPMNAFMVWSQIERRKLMSLCPNMHNADISRSLG 66
>sp|B3DM43|SOX5_XENTR Transcription factor Sox-5 OS=Xenopus tropicalis GN=sox5 PE=2 SV=1
Length = 753
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 LYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+Y R N P HIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 543 IYRESRGRGSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 592
>sp|Q9W7R6|SOX14_CHICK Transcription factor SOX-14 OS=Gallus gallus GN=SOX14 PE=2 SV=1
Length = 240
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/38 (68%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+HIKRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 6 DHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 43
>sp|Q04892|SOX14_MOUSE Transcription factor SOX-14 OS=Mus musculus GN=Sox14 PE=2 SV=2
Length = 240
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/38 (68%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+HIKRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 6 DHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 43
>sp|P61259|SOX14_MACFA Transcription factor SOX-14 OS=Macaca fascicularis GN=SOX14 PE=2
SV=1
Length = 240
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/38 (68%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+HIKRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 6 DHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 43
>sp|O95416|SOX14_HUMAN Transcription factor SOX-14 OS=Homo sapiens GN=SOX14 PE=2 SV=1
Length = 240
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/38 (68%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+HIKRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 6 DHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 43
>sp|Q32PP9|SOX14_DANRE Transcription factor Sox-14 OS=Danio rerio GN=sox14 PE=2 SV=1
Length = 238
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/38 (68%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+HIKRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 6 DHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 43
>sp|A4QNG3|SOX14_XENTR Transcription factor Sox-14 OS=Xenopus tropicalis GN=sox14 PE=2
SV=1
Length = 239
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/38 (68%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+HIKRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 6 DHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 43
>sp|B0ZTE2|SOX14_XENLA Transcription factor Sox-14 OS=Xenopus laevis GN=sox14 PE=2 SV=1
Length = 239
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/38 (68%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+HIKRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 6 DHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 43
>sp|Q6RVD7|SX21B_DANRE Transcription factor Sox-21-B OS=Danio rerio GN=sox21b PE=2 SV=1
Length = 245
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+H+KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 6 DHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLG 43
>sp|B0ZTE1|SOX21_XENLA Transcription factor Sox-21 OS=Xenopus laevis GN=sox21 PE=2 SV=1
Length = 262
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+H+KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 6 DHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLG 43
>sp|P40652|MG43_TARMA SRY-related protein MG43 (Fragment) OS=Tarentola mauritanica PE=4
SV=1
Length = 72
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/36 (77%), Positives = 31/36 (86%)
Query: 18 IKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+KRPMNAFMVWSQ ERRKI + PDMHNAEIS+RL
Sbjct: 1 VKRPMNAFMVWSQNERRKIMDQWPDMHNAEISERLG 36
>sp|Q9Y651|SOX21_HUMAN Transcription factor SOX-21 OS=Homo sapiens GN=SOX21 PE=2 SV=1
Length = 276
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+H+KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 6 DHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLG 43
>sp|O42569|SOX2_XENLA Transcription factor Sox-2 OS=Xenopus laevis GN=sox2 PE=2 SV=1
Length = 311
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 32/39 (82%)
Query: 15 PNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
P+ +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 34 PDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 72
>sp|Q811W0|SOX21_MOUSE Transcription factor SOX-21 OS=Mus musculus GN=Sox21 PE=2 SV=1
Length = 276
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+H+KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 6 DHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLG 43
>sp|Q6NVN0|SOX2_XENTR Transcription factor Sox-2 OS=Xenopus tropicalis GN=sox2 PE=2
SV=1
Length = 311
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 32/39 (82%)
Query: 15 PNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
P+ +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 34 PDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 72
>sp|Q9W7R5|SOX21_CHICK Transcription factor SOX-21 OS=Gallus gallus GN=SOX21 PE=2 SV=1
Length = 280
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 32/38 (84%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+H+KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 6 DHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLG 43
>sp|P40649|SOX13_XENLA Transcription factor Sox-13 OS=Xenopus laevis GN=sox13 PE=2 SV=3
Length = 567
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/38 (71%), Positives = 31/38 (81%)
Query: 16 NHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
NHIKRPMNAFMVW++ ERRKI + PDMHN+ ISK L
Sbjct: 390 NHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILG 427
>sp|Q6DGL6|SOX1A_DANRE Transcription factor Sox-1a OS=Danio rerio GN=sox1a PE=2 SV=2
Length = 336
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Query: 2 GLYSPMRATKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
G P +K N + +KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL
Sbjct: 22 GQTGPNSGSKANQ-DRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 72
>sp|P40653|MG44_TARMA SRY-related protein MG44 (Fragment) OS=Tarentola mauritanica PE=4
SV=1
Length = 72
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/36 (77%), Positives = 30/36 (83%)
Query: 18 IKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLA 53
+KRPMNAFMVWSQ ERRKI + PDMHNAEISK L
Sbjct: 1 VKRPMNAFMVWSQNERRKIMDQWPDMHNAEISKSLG 36
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.132 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,326,605
Number of Sequences: 539616
Number of extensions: 759371
Number of successful extensions: 1612
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 257
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 1346
Number of HSP's gapped (non-prelim): 283
length of query: 74
length of database: 191,569,459
effective HSP length: 45
effective length of query: 29
effective length of database: 167,286,739
effective search space: 4851315431
effective search space used: 4851315431
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 55 (25.8 bits)