BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy511
(67 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A1A5G6|VPP1_XENTR V-type proton ATPase 116 kDa subunit a isoform 1 OS=Xenopus
tropicalis GN=atp6v0a1 PE=2 SV=1
Length = 837
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/64 (78%), Positives = 54/64 (84%)
Query: 1 MPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEG 60
+P FERMLWR CRGNVFLRQAEIE PLED +GD V+KSVFIIFFQGDQLK RV KICEG
Sbjct: 180 IPTFERMLWRVCRGNVFLRQAEIENPLEDPVTGDSVHKSVFIIFFQGDQLKNRVKKICEG 239
Query: 61 KKLS 64
+ S
Sbjct: 240 FRAS 243
>sp|Q9Z1G4|VPP1_MOUSE V-type proton ATPase 116 kDa subunit a isoform 1 OS=Mus musculus
GN=Atp6v0a1 PE=1 SV=3
Length = 839
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/64 (78%), Positives = 54/64 (84%)
Query: 1 MPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEG 60
+P FERMLWR CRGNVFLRQAEIE PLED +GD V+KSVFIIFFQGDQLK RV KICEG
Sbjct: 187 IPTFERMLWRVCRGNVFLRQAEIENPLEDPVTGDYVHKSVFIIFFQGDQLKNRVKKICEG 246
Query: 61 KKLS 64
+ S
Sbjct: 247 FRAS 250
>sp|Q29466|VPP1_BOVIN V-type proton ATPase 116 kDa subunit a isoform 1 OS=Bos taurus
GN=ATP6V0A1 PE=2 SV=1
Length = 838
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 50/64 (78%), Positives = 54/64 (84%)
Query: 1 MPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEG 60
+P FERMLWR CRGNVFLRQAEIE PLED +GD V+KSVFIIFFQGDQLK RV KICEG
Sbjct: 180 IPTFERMLWRVCRGNVFLRQAEIENPLEDPVTGDYVHKSVFIIFFQGDQLKNRVKKICEG 239
Query: 61 KKLS 64
+ S
Sbjct: 240 FRAS 243
>sp|Q9I8D0|VPP1_CHICK V-type proton ATPase 116 kDa subunit a isoform 1 OS=Gallus gallus
GN=ATP6V0A1 PE=1 SV=1
Length = 838
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 50/64 (78%), Positives = 54/64 (84%)
Query: 1 MPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEG 60
+P FERMLWR CRGNVFLRQAEIE PLED +GD V+KSVFIIFFQGDQLK RV KICEG
Sbjct: 180 IPTFERMLWRVCRGNVFLRQAEIENPLEDPVTGDYVHKSVFIIFFQGDQLKNRVKKICEG 239
Query: 61 KKLS 64
+ S
Sbjct: 240 FRAS 243
>sp|P25286|VPP1_RAT V-type proton ATPase 116 kDa subunit a isoform 1 OS=Rattus
norvegicus GN=Atp6v0a1 PE=2 SV=1
Length = 838
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 50/64 (78%), Positives = 54/64 (84%)
Query: 1 MPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEG 60
+P FERMLWR CRGNVFLRQAEIE PLED +GD V+KSVFIIFFQGDQLK RV KICEG
Sbjct: 180 IPTFERMLWRVCRGNVFLRQAEIENPLEDPVTGDYVHKSVFIIFFQGDQLKNRVKKICEG 239
Query: 61 KKLS 64
+ S
Sbjct: 240 FRAS 243
>sp|Q93050|VPP1_HUMAN V-type proton ATPase 116 kDa subunit a isoform 1 OS=Homo sapiens
GN=ATP6V0A1 PE=1 SV=3
Length = 837
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 50/64 (78%), Positives = 54/64 (84%)
Query: 1 MPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEG 60
+P FERMLWR CRGNVFLRQAEIE PLED +GD V+KSVFIIFFQGDQLK RV KICEG
Sbjct: 180 IPTFERMLWRVCRGNVFLRQAEIENPLEDPVTGDYVHKSVFIIFFQGDQLKNRVKKICEG 239
Query: 61 KKLS 64
+ S
Sbjct: 240 FRAS 243
>sp|Q5R422|VPP1_PONAB V-type proton ATPase 116 kDa subunit a isoform 1 OS=Pongo abelii
GN=ATP6V0A1 PE=2 SV=1
Length = 837
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 50/64 (78%), Positives = 54/64 (84%)
Query: 1 MPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEG 60
+P FERMLWR CRGNVFLRQAEIE PLED +GD V+KSVFIIFFQGDQLK RV KICEG
Sbjct: 180 IPTFERMLWRVCRGNVFLRQAEIENPLEDPVTGDYVHKSVFIIFFQGDQLKNRVKKICEG 239
Query: 61 KKLS 64
+ S
Sbjct: 240 FRAS 243
>sp|Q8AVM5|VPP1_XENLA V-type proton ATPase 116 kDa subunit a isoform 1 OS=Xenopus laevis
GN=atp6v0a1 PE=2 SV=1
Length = 831
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 49/64 (76%), Positives = 54/64 (84%)
Query: 1 MPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEG 60
+P FERMLWR CRGNVFLRQA+IE PLED +GD V+KSVFIIFFQGDQLK RV KICEG
Sbjct: 180 IPTFERMLWRVCRGNVFLRQAQIENPLEDPVTGDSVHKSVFIIFFQGDQLKNRVKKICEG 239
Query: 61 KKLS 64
+ S
Sbjct: 240 FRAS 243
>sp|P30628|VPP1_CAEEL Probable V-type proton ATPase 116 kDa subunit a OS=Caenorhabditis
elegans GN=unc-32 PE=2 SV=3
Length = 905
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 44/60 (73%), Positives = 50/60 (83%)
Query: 1 MPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEG 60
+PAFER+LWRACRGNVFLR +EI+ L D +GDPV K VFIIFFQGD LKT+V KICEG
Sbjct: 216 LPAFERLLWRACRGNVFLRTSEIDDVLNDTVTGDPVNKCVFIIFFQGDHLKTKVKKICEG 275
>sp|Q9HBG4|VPP4_HUMAN V-type proton ATPase 116 kDa subunit a isoform 4 OS=Homo sapiens
GN=ATP6V0A4 PE=1 SV=2
Length = 840
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 49/60 (81%)
Query: 1 MPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEG 60
M +FER+LWR CRGNV+L+ +E++ PLED + + + K++FIIF+QG+QL+ ++ KIC+G
Sbjct: 182 MASFERLLWRICRGNVYLKFSEMDAPLEDPVTKEEIQKNIFIIFYQGEQLRQKIKKICDG 241
>sp|Q920R6|VPP4_MOUSE V-type proton ATPase 116 kDa subunit a isoform 4 OS=Mus musculus
GN=Atp6v0a4 PE=2 SV=1
Length = 833
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 49/60 (81%)
Query: 1 MPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEG 60
M +FER+LWR CRGNV+L+ +E++T LED + + + K++FIIF+QG+QL+ ++ KIC+G
Sbjct: 182 MASFERLLWRVCRGNVYLKFSEMDTLLEDPVTKEEIKKNIFIIFYQGEQLRLKIKKICDG 241
>sp|Q8W4S4|VHAA3_ARATH Vacuolar proton ATPase a3 OS=Arabidopsis thaliana GN=VHA-a3 PE=1
SV=1
Length = 821
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 45/57 (78%)
Query: 4 FERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEG 60
FER+L+RA RGN+F+RQ IE P+ D NSG+ K+VF++F+ G++ K++++KICE
Sbjct: 206 FERILFRATRGNIFIRQTVIEEPVIDPNSGEKAEKNVFVVFYSGERAKSKILKICEA 262
>sp|Q9SJT7|VHAA2_ARATH Vacuolar proton ATPase a2 OS=Arabidopsis thaliana GN=VHA-a2 PE=1
SV=1
Length = 821
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 45/57 (78%)
Query: 4 FERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEG 60
FER+L+RA RGN+F+RQ+ IE + D NSG+ K+VF++F+ G++ K++++KICE
Sbjct: 207 FERILFRATRGNIFIRQSVIEESVVDPNSGEKAEKNVFVVFYSGERAKSKILKICEA 263
>sp|Q54E04|VATM_DICDI Vacuolar proton translocating ATPase 100 kDa subunit
OS=Dictyostelium discoideum GN=vatM PE=1 SV=2
Length = 815
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 42/60 (70%)
Query: 1 MPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEG 60
MP F+R LWR RGN +++ A IE + D +G+ K+VFI+FFQG++L+ ++ KICE
Sbjct: 194 MPQFQRSLWRTTRGNNYVKDARIEEEIIDPQTGEETAKTVFIVFFQGERLQQKIKKICES 253
>sp|Q01290|VPH1_NEUCR V-type proton ATPase subunit a OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=vph-1 PE=3 SV=1
Length = 856
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 39/58 (67%)
Query: 3 AFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEG 60
AFER+LWR RGN+++ QAEI PL D +PV K+VF+IF G ++ ++ +I E
Sbjct: 203 AFERILWRTLRGNLYMNQAEIPEPLIDPTINEPVLKNVFVIFAHGKEILAKIRRISES 260
>sp|O97681|VPP2_BOVIN V-type proton ATPase 116 kDa subunit a isoform 2 OS=Bos taurus
GN=ATP6V0A2 PE=2 SV=1
Length = 854
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 39/57 (68%)
Query: 3 AFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICE 59
AFE+MLWR C+G + AE++ PLED +G+ + VF+I F G+Q+ +V KIC+
Sbjct: 187 AFEKMLWRVCKGYTIVTYAELDEPLEDPETGEVIKWYVFLISFWGEQIGHKVKKICD 243
>sp|P15920|VPP2_MOUSE V-type proton ATPase 116 kDa subunit a isoform 2 OS=Mus musculus
GN=Atp6v0a2 PE=1 SV=2
Length = 856
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 39/57 (68%)
Query: 3 AFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICE 59
AFERMLWRAC+G + AE++ LED +G+ + VF+I F G+Q+ +V KIC+
Sbjct: 187 AFERMLWRACKGYTIVTYAELDECLEDPETGEVIKWYVFLISFWGEQIGHKVKKICD 243
>sp|Q9Y487|VPP2_HUMAN V-type proton ATPase 116 kDa subunit a isoform 2 OS=Homo sapiens
GN=ATP6V0A2 PE=1 SV=2
Length = 856
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 38/57 (66%)
Query: 3 AFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICE 59
AFE+MLWR C+G + AE++ LED +G+ + VF+I F G+Q+ +V KIC+
Sbjct: 187 AFEKMLWRVCKGYTIVSYAELDESLEDPETGEVIKWYVFLISFWGEQIGHKVKKICD 243
>sp|P32563|VPH1_YEAST V-type proton ATPase subunit a, vacuolar isoform OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=VPH1 PE=1
SV=3
Length = 840
Score = 56.6 bits (135), Expect = 4e-08, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 36/56 (64%)
Query: 4 FERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICE 59
E++LWR RGN+F + EIE P+ D+ + + +K+ FI+F GD + R+ KI E
Sbjct: 199 LEQILWRVLRGNLFFKTVEIEQPVYDVKTREYKHKNAFIVFSHGDLIIKRIRKIAE 254
>sp|Q13488|VPP3_HUMAN V-type proton ATPase 116 kDa subunit a isoform 3 OS=Homo sapiens
GN=TCIRG1 PE=1 SV=3
Length = 830
Score = 55.5 bits (132), Expect = 9e-08, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 36/58 (62%)
Query: 2 PAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICE 59
PA ER+LWRACRG + E+E PLE +G+P F+I + G+Q+ ++ KI +
Sbjct: 180 PALERLLWRACRGFLIASFRELEQPLEHPVTGEPATWMTFLISYWGEQIGQKIRKITD 237
>sp|Q8RWZ7|VHAA1_ARATH Vacuolar proton ATPase a1 OS=Arabidopsis thaliana GN=VHA-a1 PE=1
SV=1
Length = 817
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 39/57 (68%)
Query: 4 FERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEG 60
FERML+RA RGN+ Q + + D ++ + V K VF++FF G+Q +T+++KICE
Sbjct: 205 FERMLFRATRGNMLFNQTTSDEEIMDPSTSEMVEKVVFVVFFSGEQARTKILKICEA 261
>sp|P37296|STV1_YEAST V-type proton ATPase subunit a, Golgi isoform OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=STV1 PE=1
SV=2
Length = 890
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 4 FERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICE 59
R+LWR RGN+ + IE PL + + V K FIIF G+ L +V ++ +
Sbjct: 252 LNRILWRLLRGNLIFQNFPIEEPL--LEGKEKVEKDCFIIFTHGETLLKKVKRVID 305
>sp|O13742|VPH1_SCHPO V-type proton ATPase subunit a OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=vph1 PE=3 SV=2
Length = 831
Score = 39.3 bits (90), Expect = 0.006, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 4 FERMLWRACRGNVFLRQAEIETPLEDINSGDP-VYKSVFIIFFQGDQLKTRVMKICE 59
ER+LWR RGN+F+ Q + L I+ + K++F++ G Q+ R+ KI E
Sbjct: 214 LERILWRTLRGNLFIHQVRADDSL--IHGAEKNEEKTIFLVIAHGTQILLRIRKISE 268
>sp|Q6FM46|COPB_CANGA Coatomer subunit beta OS=Candida glabrata (strain ATCC 2001 / CBS
138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=SEC26 PE=3
SV=1
Length = 972
Score = 30.8 bits (68), Expect = 2.4, Method: Composition-based stats.
Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 9/54 (16%)
Query: 12 CRGNVFLRQAEIETP---------LEDINSGDPVYKSVFIIFFQGDQLKTRVMK 56
C+ N FL +E++ ++DI S DP+ ++ F+ F + D ++T +K
Sbjct: 191 CKRNAFLGLSELDRDNALQYLQDNIDDIESLDPLLQAAFVQFIRKDAIQTPALK 244
>sp|P41810|COPB_YEAST Coatomer subunit beta OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=SEC26 PE=1 SV=2
Length = 973
Score = 30.4 bits (67), Expect = 3.8, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 9/54 (16%)
Query: 12 CRGNVFLRQAEI---------ETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMK 56
C+ N F+ AE+ E + DI + DP+ ++VF+ F + D +T +K
Sbjct: 191 CKRNAFIGLAELDRENALHYLENNIADIENLDPLLQAVFVQFIRQDANRTPALK 244
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.326 0.140 0.426
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,712,262
Number of Sequences: 539616
Number of extensions: 726749
Number of successful extensions: 1670
Number of sequences better than 100.0: 25
Number of HSP's better than 100.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1648
Number of HSP's gapped (non-prelim): 25
length of query: 67
length of database: 191,569,459
effective HSP length: 39
effective length of query: 28
effective length of database: 170,524,435
effective search space: 4774684180
effective search space used: 4774684180
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)