Query psy511
Match_columns 67
No_of_seqs 103 out of 325
Neff 6.5
Searched_HMMs 13730
Date Fri Aug 16 17:30:41 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy511.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/511hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1zpwx1 d.58.58.1 (X:2-83) Hyp 70.1 2.7 0.0002 22.1 3.4 25 39-63 3-29 (82)
2 d2ivya1 d.58.58.1 (A:2-89) Hyp 64.0 5.1 0.00037 21.2 3.8 24 40-63 3-28 (88)
3 d2pv7a2 c.2.1.6 (A:92-243) Pre 58.9 8.9 0.00065 20.8 4.4 52 8-66 97-150 (152)
4 d2f1fa2 d.58.18.6 (A:78-163) A 42.0 20 0.0015 18.4 4.8 19 48-66 18-36 (86)
5 d2pc6a1 d.58.18.6 (A:78-163) A 41.1 8.2 0.0006 20.1 2.1 18 49-66 19-36 (86)
6 d2i0xa1 d.58.58.1 (A:1-84) Hyp 39.9 7 0.00051 20.4 1.7 29 32-60 24-55 (84)
7 d2a6ca1 a.35.1.13 (A:1-69) HTH 38.1 7.1 0.00052 19.0 1.5 16 50-65 48-63 (69)
8 d1h3oa_ a.22.1.3 (A:) TAF(II)- 36.8 6 0.00044 19.2 1.0 19 45-63 3-21 (50)
9 d1puza_ a.218.1.1 (A:) Hypothe 35.1 6.2 0.00045 20.4 0.9 12 3-14 8-19 (82)
10 d1utxa_ a.35.1.3 (A:) Putative 34.4 7.6 0.00055 18.6 1.2 15 51-65 43-57 (66)
11 d2ctka1 d.51.1.1 (A:8-98) Vigi 33.1 11 0.00078 19.3 1.7 17 51-67 29-45 (91)
12 d1dxya1 c.2.1.4 (A:101-299) D- 33.0 18 0.0013 21.0 3.0 20 48-67 54-73 (199)
13 d2fgca1 d.58.18.6 (A:105-187) 32.7 24 0.0017 18.0 3.1 17 50-66 21-37 (83)
14 d2r1jl1 a.35.1.2 (L:3-68) P22 31.7 9 0.00066 18.2 1.2 15 51-65 45-59 (66)
15 d1s4ca1 b.82.2.7 (A:1-143) Hyp 31.4 3.5 0.00025 23.5 -0.6 10 39-48 119-128 (143)
16 d1vgya2 d.58.19.1 (A:181-293) 31.0 15 0.0011 19.3 2.1 17 48-64 87-103 (113)
17 d1ygya1 c.2.1.4 (A:99-282) Pho 30.3 22 0.0016 20.3 3.0 20 47-66 52-71 (184)
18 d1b0na2 a.35.1.3 (A:1-68) SinR 28.3 9.7 0.0007 18.2 0.9 15 51-65 44-58 (68)
19 d1f46a_ d.129.4.1 (A:) Cell-di 25.9 50 0.0037 18.1 7.6 55 12-66 48-112 (139)
20 d1j4aa1 c.2.1.4 (A:104-300) D- 24.4 22 0.0016 20.8 2.2 19 48-66 52-70 (197)
21 d2ctla1 d.51.1.1 (A:8-91) Vigi 24.3 11 0.0008 18.9 0.7 17 51-67 29-45 (84)
22 d1mx3a1 c.2.1.4 (A:126-318) Tr 23.1 23 0.0017 20.5 2.2 19 48-66 58-76 (193)
23 d2croa_ a.35.1.2 (A:) cro 434 22.8 11 0.00081 17.9 0.5 14 52-65 45-58 (65)
24 d2fh5a1 d.110.4.4 (A:1-129) Si 22.0 47 0.0034 18.3 3.3 9 39-47 64-72 (129)
25 d1e3ha4 d.52.3.1 (A:579-632) P 21.5 11 0.0008 18.1 0.3 16 51-66 22-37 (54)
26 d1wf6a_ c.15.1.5 (A:) DNA topo 21.1 46 0.0033 17.6 3.1 18 48-65 53-70 (132)
27 d1r5pa_ c.47.1.15 (A:) Circadi 21.0 37 0.0027 17.9 2.5 22 40-61 3-29 (90)
28 d1y7ya1 a.35.1.3 (A:5-73) Rest 20.9 20 0.0015 17.0 1.3 14 51-64 51-64 (69)
29 d1y9qa1 a.35.1.8 (A:4-82) Prob 20.8 18 0.0013 17.6 1.2 14 51-64 50-63 (79)
30 d1u8sa2 d.58.18.5 (A:88-180) p 20.8 33 0.0024 17.3 2.3 18 48-65 69-86 (93)
31 d1p71a_ a.55.1.1 (A:) HU prote 20.4 53 0.0039 16.6 3.1 30 27-56 60-91 (94)
32 d1viga_ d.51.1.1 (A:) Vigilin 20.3 17 0.0012 17.7 0.9 17 51-67 24-40 (71)
33 d1xmba2 d.58.19.1 (A:216-334) 20.2 31 0.0023 18.1 2.1 16 50-65 90-105 (119)
34 d1owfb_ a.55.1.1 (B:) Integrat 20.1 53 0.0039 16.7 3.1 30 27-56 61-92 (94)
No 1
>d1zpwx1 d.58.58.1 (X:2-83) Hypothetical protein TTP0101 (TT1823) {Thermus thermophilus [TaxId: 274]}
Probab=70.08 E-value=2.7 Score=22.11 Aligned_cols=25 Identities=4% Similarity=0.262 Sum_probs=16.9
Q ss_pred EEEEEEEe--cHHHHHHHHHhhhhcCC
Q psy511 39 SVFIIFFQ--GDQLKTRVMKICEGKKL 63 (67)
Q Consensus 39 ~vFiv~~~--G~~l~~Ki~KIc~~f~a 63 (67)
..++|.|- .+.-+.|+.|+|++++-
T Consensus 3 ~~ylV~YDI~d~krr~kv~k~l~~yg~ 29 (82)
T d1zpwx1 3 RLYAVAYDIPDDTRRVKLANLLKSYGE 29 (82)
T ss_dssp EEEEEEEECCCHHHHHHHHHHHHTTEE
T ss_pred EEEEEEEeCCCcHHHHHHHHHHHHhCc
Confidence 45666662 45677888888887764
No 2
>d2ivya1 d.58.58.1 (A:2-89) Hypothetical protein SSO1404 {Sulfolobus solfataricus [TaxId: 2287]}
Probab=63.99 E-value=5.1 Score=21.17 Aligned_cols=24 Identities=33% Similarity=0.746 Sum_probs=19.0
Q ss_pred EEEEEEe--cHHHHHHHHHhhhhcCC
Q psy511 40 VFIIFFQ--GDQLKTRVMKICEGKKL 63 (67)
Q Consensus 40 vFiv~~~--G~~l~~Ki~KIc~~f~a 63 (67)
-++|.|- .+.-+.|+.|+|+++|.
T Consensus 3 ~~lV~YDI~d~krr~kv~k~l~~yGl 28 (88)
T d2ivya1 3 LYLIFYDITDDNLRNRVAEFLKKKGL 28 (88)
T ss_dssp EEEEEEEECCHHHHHHHHHHHHHTTC
T ss_pred EEEEEEECCCcHHHHHHHHHHHHhCC
Confidence 4667773 45789999999999985
No 3
>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}
Probab=58.91 E-value=8.9 Score=20.84 Aligned_cols=52 Identities=6% Similarity=-0.043 Sum_probs=31.4
Q ss_pred HHHhhCCcEEEEeeecCCcccCCCCCCceeeEEEEEEEec--HHHHHHHHHhhhhcCCeee
Q psy511 8 LWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQG--DQLKTRVMKICEGKKLSSV 66 (67)
Q Consensus 8 lwR~~RGN~~~~~~~i~~~~~d~~~~~~~~k~vFiv~~~G--~~l~~Ki~KIc~~f~a~~~ 66 (67)
+-....++ |+-..++..|- .+....+. +++.+| ....+|++.+.+..|+++|
T Consensus 97 ~~~~~~~~-~v~~hP~~Gp~----~~~~~g~~--~v~~~g~~~~~~~~~~~ll~~~Ga~v~ 150 (152)
T d2pv7a2 97 MLEVHTGA-VLGLHPMFGAD----IASMAKQV--VVRCDGRFPERYEWLLEQIQIWGAKIY 150 (152)
T ss_dssp HHHHCSSE-EEEEEECSCTT----CSCCTTCE--EEEEEEECGGGTHHHHHHHHHTTCEEE
T ss_pred HHHHccCC-EEEecccCCCc----ccccCCcE--EEEecCCCHHHHHHHHHHHHHhCCEEE
Confidence 33445555 45455665543 32222222 444444 4678999999999999986
No 4
>d2f1fa2 d.58.18.6 (A:78-163) Acetolactate synthase small subunit, IlvH {Escherichia coli [TaxId: 562]}
Probab=41.99 E-value=20 Score=18.41 Aligned_cols=19 Identities=11% Similarity=-0.101 Sum_probs=15.8
Q ss_pred HHHHHHHHHhhhhcCCeee
Q psy511 48 DQLKTRVMKICEGKKLSSV 66 (67)
Q Consensus 48 ~~l~~Ki~KIc~~f~a~~~ 66 (67)
+.-+.+|.++|+.|+|++.
T Consensus 18 ~~~~~~i~~i~~~f~a~iv 36 (86)
T d2f1fa2 18 GYGRDEVKRNTEIFRGQII 36 (86)
T ss_dssp THHHHHHHHHHHHTTCEEE
T ss_pred hhhHHHHHHHHHhcCeEEE
Confidence 4566789999999999874
No 5
>d2pc6a1 d.58.18.6 (A:78-163) Acetolactate synthase small subunit, IlvH {Nitrosomonas europaea [TaxId: 915]}
Probab=41.15 E-value=8.2 Score=20.06 Aligned_cols=18 Identities=0% Similarity=0.041 Sum_probs=15.3
Q ss_pred HHHHHHHHhhhhcCCeee
Q psy511 49 QLKTRVMKICEGKKLSSV 66 (67)
Q Consensus 49 ~l~~Ki~KIc~~f~a~~~ 66 (67)
.-+.++.++|+.|+|++.
T Consensus 19 ~~~~~i~~i~~~f~a~iv 36 (86)
T d2pc6a1 19 KDREEMKRLADIFRGNII 36 (86)
T ss_dssp HHHHHHHHHHHHTTCEEE
T ss_pred hhHHHHHHHHHHcCcEEE
Confidence 448899999999999873
No 6
>d2i0xa1 d.58.58.1 (A:1-84) Hypothetical protein PF1117 {Pyrococcus furiosus [TaxId: 2261]}
Probab=39.93 E-value=7 Score=20.44 Aligned_cols=29 Identities=24% Similarity=0.115 Sum_probs=21.0
Q ss_pred CCCceeeEEEEEEEec---HHHHHHHHHhhhh
Q psy511 32 SGDPVYKSVFIIFFQG---DQLKTRVMKICEG 60 (67)
Q Consensus 32 ~~~~~~k~vFiv~~~G---~~l~~Ki~KIc~~ 60 (67)
.|..+++|||..--.. ..|..++.++.+.
T Consensus 24 yg~rvQ~SVFe~~l~~~~~~~l~~~l~~~i~~ 55 (84)
T d2i0xa1 24 HLNWVQNSVFEGEVTLAEFERIKEGLKKIIDE 55 (84)
T ss_dssp TSEEEETTEEEEECCHHHHHHHHHHHHHSSCT
T ss_pred hCccceeEEEEEEeCHHHHHHHHHHHHHhcCC
Confidence 3556789999988755 3567788887754
No 7
>d2a6ca1 a.35.1.13 (A:1-69) HTH-motif protein NE1354 {Nitrosomonas europaea [TaxId: 915]}
Probab=38.11 E-value=7.1 Score=19.01 Aligned_cols=16 Identities=6% Similarity=0.042 Sum_probs=13.1
Q ss_pred HHHHHHHhhhhcCCee
Q psy511 50 LKTRVMKICEGKKLSS 65 (67)
Q Consensus 50 l~~Ki~KIc~~f~a~~ 65 (67)
-..++.+||+.+|+++
T Consensus 48 s~~~L~~ia~~Lg~~i 63 (69)
T d2a6ca1 48 SLESLIDMITSIGLKV 63 (69)
T ss_dssp CHHHHHHHHHHTTCCC
T ss_pred hHHHHHHHHHHhCCCc
Confidence 3578899999999875
No 8
>d1h3oa_ a.22.1.3 (A:) TAF(II)-135, (TAF(II)-130, hTAF4), histone fold domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=36.76 E-value=6 Score=19.18 Aligned_cols=19 Identities=16% Similarity=0.359 Sum_probs=15.1
Q ss_pred EecHHHHHHHHHhhhhcCC
Q psy511 45 FQGDQLKTRVMKICEGKKL 63 (67)
Q Consensus 45 ~~G~~l~~Ki~KIc~~f~a 63 (67)
-+-..|..||++|+..+|.
T Consensus 3 L~~~~Lq~ri~~I~~k~Gl 21 (50)
T d1h3oa_ 3 LLQAPLQRRILEIGKKHGI 21 (50)
T ss_dssp SCHHHHHHHHHHHHHTTTC
T ss_pred CChHHHHHHHHHHHHHcCC
Confidence 3457889999999988775
No 9
>d1puza_ a.218.1.1 (A:) Hypothetical protein NMA1147 {Neisseria meningitidis, mc58 [TaxId: 487]}
Probab=35.10 E-value=6.2 Score=20.41 Aligned_cols=12 Identities=25% Similarity=0.481 Sum_probs=9.2
Q ss_pred hHHHHHHHhhCC
Q psy511 3 AFERMLWRACRG 14 (67)
Q Consensus 3 ~fer~lwR~~RG 14 (67)
.-.|+.||+=||
T Consensus 8 ~~krl~~r~rRG 19 (82)
T d1puza_ 8 AKRKIRFQTRRG 19 (82)
T ss_dssp HHHHHHHHSCCS
T ss_pred HHHHHHHHhccc
Confidence 347899997777
No 10
>d1utxa_ a.35.1.3 (A:) Putative transcription regulator CylR2 {Enterococcus faecalis [TaxId: 1351]}
Probab=34.45 E-value=7.6 Score=18.64 Aligned_cols=15 Identities=13% Similarity=-0.102 Sum_probs=12.1
Q ss_pred HHHHHHhhhhcCCee
Q psy511 51 KTRVMKICEGKKLSS 65 (67)
Q Consensus 51 ~~Ki~KIc~~f~a~~ 65 (67)
..++.+||+.|++++
T Consensus 43 ~~~l~~ia~~l~v~~ 57 (66)
T d1utxa_ 43 LQLALKIAYYLNTPL 57 (66)
T ss_dssp HHHHHHHHHHTTSCH
T ss_pred HHHHHHHHHHHCCCH
Confidence 567899999998763
No 11
>d2ctka1 d.51.1.1 (A:8-98) Vigilin {Human (Homo sapiens) [TaxId: 9606]}
Probab=33.10 E-value=11 Score=19.32 Aligned_cols=17 Identities=12% Similarity=0.153 Sum_probs=14.5
Q ss_pred HHHHHHhhhhcCCeeeC
Q psy511 51 KTRVMKICEGKKLSSVV 67 (67)
Q Consensus 51 ~~Ki~KIc~~f~a~~~~ 67 (67)
+..|++|++.+|+++.+
T Consensus 29 G~~i~~I~~~tg~~I~~ 45 (91)
T d2ctka1 29 GSGIRKMMDEFEVNIHV 45 (91)
T ss_dssp SHHHHHHHHHTCCEEEC
T ss_pred chhHHHHHHHhCCEEEE
Confidence 67899999999998864
No 12
>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}
Probab=32.98 E-value=18 Score=21.00 Aligned_cols=20 Identities=10% Similarity=0.223 Sum_probs=17.9
Q ss_pred HHHHHHHHHhhhhcCCeeeC
Q psy511 48 DQLKTRVMKICEGKKLSSVV 67 (67)
Q Consensus 48 ~~l~~Ki~KIc~~f~a~~~~ 67 (67)
..+++++-|.+.+|++++++
T Consensus 54 G~IG~~va~~l~~fg~~v~~ 73 (199)
T d1dxya1 54 GHIGQVAIKLFKGFGAKVIA 73 (199)
T ss_dssp SHHHHHHHHHHHHTTCEEEE
T ss_pred ccccccccccccccceeeec
Confidence 68999999999999999863
No 13
>d2fgca1 d.58.18.6 (A:105-187) Acetolactate synthase small subunit, IlvH {Thermotoga maritima [TaxId: 2336]}
Probab=32.71 E-value=24 Score=18.03 Aligned_cols=17 Identities=12% Similarity=0.083 Sum_probs=14.3
Q ss_pred HHHHHHHhhhhcCCeee
Q psy511 50 LKTRVMKICEGKKLSSV 66 (67)
Q Consensus 50 l~~Ki~KIc~~f~a~~~ 66 (67)
-+.+|.++|+.|+|++.
T Consensus 21 ~~~~i~~~~~~f~a~iv 37 (83)
T d2fgca1 21 DKQEIFQLVEIFRGKII 37 (83)
T ss_dssp CHHHHHHHHHHTTCEEE
T ss_pred CHHHHHHHHHHcCCEEE
Confidence 36789999999999873
No 14
>d2r1jl1 a.35.1.2 (L:3-68) P22 C2 repressor, DNA-binding domain {Salmonella bacteriophage P22 [TaxId: 10754]}
Probab=31.71 E-value=9 Score=18.22 Aligned_cols=15 Identities=7% Similarity=0.189 Sum_probs=11.9
Q ss_pred HHHHHHhhhhcCCee
Q psy511 51 KTRVMKICEGKKLSS 65 (67)
Q Consensus 51 ~~Ki~KIc~~f~a~~ 65 (67)
...+.+||+.|++++
T Consensus 45 ~~~l~~ia~~l~v~~ 59 (66)
T d2r1jl1 45 GENLLALSKALQCSP 59 (66)
T ss_dssp HHHHHHHHHHTTSCH
T ss_pred HHHHHHHHHHhCCCH
Confidence 567889999998764
No 15
>d1s4ca1 b.82.2.7 (A:1-143) Hypothetical protein HI0227 {Haemophilus influenzae [TaxId: 727]}
Probab=31.37 E-value=3.5 Score=23.51 Aligned_cols=10 Identities=20% Similarity=0.720 Sum_probs=7.9
Q ss_pred EEEEEEEecH
Q psy511 39 SVFIIFFQGD 48 (67)
Q Consensus 39 ~vFiv~~~G~ 48 (67)
--|+|||++|
T Consensus 119 G~f~iFfP~D 128 (143)
T d1s4ca1 119 KMFAVFYPYE 128 (143)
T ss_dssp TEEEEECTTC
T ss_pred CeEEEECCCC
Confidence 3489999986
No 16
>d1vgya2 d.58.19.1 (A:181-293) Succinyl-diaminopimelate desuccinylase {Neisseria meningitidis [TaxId: 487]}
Probab=31.03 E-value=15 Score=19.32 Aligned_cols=17 Identities=29% Similarity=0.352 Sum_probs=15.1
Q ss_pred HHHHHHHHHhhhhcCCe
Q psy511 48 DQLKTRVMKICEGKKLS 64 (67)
Q Consensus 48 ~~l~~Ki~KIc~~f~a~ 64 (67)
+.+.++|++||+.++++
T Consensus 87 ~~i~~~i~~i~~~~~~~ 103 (113)
T d1vgya2 87 AGLKQRVHAILDKHGVQ 103 (113)
T ss_dssp HHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHcCCe
Confidence 68999999999998775
No 17
>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=30.28 E-value=22 Score=20.35 Aligned_cols=20 Identities=10% Similarity=-0.117 Sum_probs=17.9
Q ss_pred cHHHHHHHHHhhhhcCCeee
Q psy511 47 GDQLKTRVMKICEGKKLSSV 66 (67)
Q Consensus 47 G~~l~~Ki~KIc~~f~a~~~ 66 (67)
...+++++.+.+.+|+++++
T Consensus 52 ~G~IG~~va~~~~~fg~~v~ 71 (184)
T d1ygya1 52 LGRIGQLVAQRIAAFGAYVV 71 (184)
T ss_dssp CSHHHHHHHHHHHTTTCEEE
T ss_pred ccchhHHHHHHhhhccceEE
Confidence 37899999999999999886
No 18
>d1b0na2 a.35.1.3 (A:1-68) SinR repressor, DNA-binding domain {Bacillus subtilis [TaxId: 1423]}
Probab=28.28 E-value=9.7 Score=18.25 Aligned_cols=15 Identities=13% Similarity=-0.020 Sum_probs=11.7
Q ss_pred HHHHHHhhhhcCCee
Q psy511 51 KTRVMKICEGKKLSS 65 (67)
Q Consensus 51 ~~Ki~KIc~~f~a~~ 65 (67)
...+.+||+.|++++
T Consensus 44 ~~~l~~ia~~l~v~~ 58 (68)
T d1b0na2 44 IQFLEKVSAVLDVSV 58 (68)
T ss_dssp HHHHHHHHHHHTCCH
T ss_pred HHHHHHHHHHHCCcH
Confidence 467889999998753
No 19
>d1f46a_ d.129.4.1 (A:) Cell-division protein ZipA, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=25.86 E-value=50 Score=18.06 Aligned_cols=55 Identities=11% Similarity=0.055 Sum_probs=35.6
Q ss_pred hCCcEEEEeeecCCc-ccCCCCCCc-eeeEEEEEEEec--------HHHHHHHHHhhhhcCCeee
Q psy511 12 CRGNVFLRQAEIETP-LEDINSGDP-VYKSVFIIFFQG--------DQLKTRVMKICEGKKLSSV 66 (67)
Q Consensus 12 ~RGN~~~~~~~i~~~-~~d~~~~~~-~~k~vFiv~~~G--------~~l~~Ki~KIc~~f~a~~~ 66 (67)
..|+..+....+.+| ..|++.+.. ..=.+|.+--++ +.+.+=.+.||+.+++.+.
T Consensus 48 ~~g~~lFsvaN~~~PGtF~~d~~~~~t~gi~lfm~lp~~~~~~~aFd~Ml~~a~~la~~l~g~l~ 112 (139)
T d1f46a_ 48 GSGPALFSLANMVKPGTFDPEMKDFTTPGVTIFMQVPSYGDELQLFKLMLQSAQHIADEVGGVVL 112 (139)
T ss_dssp CCSCEEEEEEESSTTCCCCTTCCSCEESEEEEEEEECSSSCHHHHHHHHHHHHHHHHHHHTCEEE
T ss_pred CCCceEEEEEeCCCCCCCCchhhcceeceEEEEEeCCCCCchHHHHHHHHHHHHHHHHHCCCEEE
Confidence 457788888888665 345443332 222344444444 5788888999999999874
No 20
>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}
Probab=24.38 E-value=22 Score=20.79 Aligned_cols=19 Identities=21% Similarity=0.296 Sum_probs=17.6
Q ss_pred HHHHHHHHHhhhhcCCeee
Q psy511 48 DQLKTRVMKICEGKKLSSV 66 (67)
Q Consensus 48 ~~l~~Ki~KIc~~f~a~~~ 66 (67)
..+++++-|.+.+||++++
T Consensus 52 G~IG~~va~~l~~fg~~V~ 70 (197)
T d1j4aa1 52 GHIGQVFMQIMEGFGAKVI 70 (197)
T ss_dssp SHHHHHHHHHHHHTTCEEE
T ss_pred cccchhHHHhHhhhccccc
Confidence 6899999999999999986
No 21
>d2ctla1 d.51.1.1 (A:8-91) Vigilin {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.35 E-value=11 Score=18.94 Aligned_cols=17 Identities=6% Similarity=0.008 Sum_probs=14.0
Q ss_pred HHHHHHhhhhcCCeeeC
Q psy511 51 KTRVMKICEGKKLSSVV 67 (67)
Q Consensus 51 ~~Ki~KIc~~f~a~~~~ 67 (67)
+..|++|.+.++|++.+
T Consensus 29 G~~i~~I~~~t~~~I~~ 45 (84)
T d2ctla1 29 GAVITQIRLEHDVNIQF 45 (84)
T ss_dssp SCHHHHHHHHHTCEEEC
T ss_pred chhHHHHHHHhCCEEEE
Confidence 56789999999998864
No 22
>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}
Probab=23.15 E-value=23 Score=20.53 Aligned_cols=19 Identities=5% Similarity=0.027 Sum_probs=17.6
Q ss_pred HHHHHHHHHhhhhcCCeee
Q psy511 48 DQLKTRVMKICEGKKLSSV 66 (67)
Q Consensus 48 ~~l~~Ki~KIc~~f~a~~~ 66 (67)
..+++++-|++.+||++++
T Consensus 58 G~IG~~va~~l~~fg~~v~ 76 (193)
T d1mx3a1 58 GRVGQAVALRAKAFGFNVL 76 (193)
T ss_dssp SHHHHHHHHHHHTTTCEEE
T ss_pred ccccccceeeeecccccee
Confidence 7999999999999999885
No 23
>d2croa_ a.35.1.2 (A:) cro 434 {Bacteriophage 434 [TaxId: 10712]}
Probab=22.79 E-value=11 Score=17.87 Aligned_cols=14 Identities=7% Similarity=0.057 Sum_probs=10.7
Q ss_pred HHHHHhhhhcCCee
Q psy511 52 TRVMKICEGKKLSS 65 (67)
Q Consensus 52 ~Ki~KIc~~f~a~~ 65 (67)
..+.+||+.|+++.
T Consensus 45 ~~l~~ia~~l~v~~ 58 (65)
T d2croa_ 45 RFLFEIAMALNCDP 58 (65)
T ss_dssp TTHHHHHHHTTSCH
T ss_pred HHHHHHHHHhCCCH
Confidence 46788999988763
No 24
>d2fh5a1 d.110.4.4 (A:1-129) Signal recognition particle receptor alpha subunit, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.00 E-value=47 Score=18.32 Aligned_cols=9 Identities=44% Similarity=0.663 Sum_probs=8.4
Q ss_pred EEEEEEEec
Q psy511 39 SVFIIFFQG 47 (67)
Q Consensus 39 ~vFiv~~~G 47 (67)
.||++.||+
T Consensus 64 lvfV~vYQ~ 72 (129)
T d2fh5a1 64 LVFVVGFQK 72 (129)
T ss_dssp EEEEEEESC
T ss_pred EEEEEEEhh
Confidence 699999998
No 25
>d1e3ha4 d.52.3.1 (A:579-632) Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 6 {Streptomyces antibioticus [TaxId: 1890]}
Probab=21.46 E-value=11 Score=18.09 Aligned_cols=16 Identities=13% Similarity=0.104 Sum_probs=9.0
Q ss_pred HHHHHHhhhhcCCeee
Q psy511 51 KTRVMKICEGKKLSSV 66 (67)
Q Consensus 51 ~~Ki~KIc~~f~a~~~ 66 (67)
+..|++|++..+|++-
T Consensus 22 G~~Ik~I~~~tga~I~ 37 (54)
T d1e3ha4 22 RQMINQIQEDTGAEIT 37 (54)
T ss_dssp -----CHHHHSCCCC-
T ss_pred cHHHHHHHHHHCCEEE
Confidence 5678899999998864
No 26
>d1wf6a_ c.15.1.5 (A:) DNA topoisomerase II binding protein 1, TopBP1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.15 E-value=46 Score=17.60 Aligned_cols=18 Identities=0% Similarity=-0.032 Sum_probs=15.1
Q ss_pred HHHHHHHHHhhhhcCCee
Q psy511 48 DQLKTRVMKICEGKKLSS 65 (67)
Q Consensus 48 ~~l~~Ki~KIc~~f~a~~ 65 (67)
+.-+++++++...+||++
T Consensus 53 ~~~~~~l~~~i~~~GG~~ 70 (132)
T d1wf6a_ 53 GRKLDKLRRLINSGGGVR 70 (132)
T ss_dssp SHHHHHHHHHHHHTTCEE
T ss_pred CHHHHHHHHHHHHcCCEE
Confidence 456888999999999986
No 27
>d1r5pa_ c.47.1.15 (A:) Circadian oscillation regulator KaiB {Cyanobacterium (Nostoc sp.) pcc 7120 [TaxId: 1180]}
Probab=20.97 E-value=37 Score=17.87 Aligned_cols=22 Identities=18% Similarity=0.310 Sum_probs=16.0
Q ss_pred EEEEEEec-----HHHHHHHHHhhhhc
Q psy511 40 VFIIFFQG-----DQLKTRVMKICEGK 61 (67)
Q Consensus 40 vFiv~~~G-----~~l~~Ki~KIc~~f 61 (67)
++-+|..| ....+.+++||+..
T Consensus 3 ~L~LyVaG~tp~S~~ai~nl~~i~e~~ 29 (90)
T d1r5pa_ 3 VLKLYVAGNTPNSVRALKTLKNILEQE 29 (90)
T ss_dssp EEEEEESSCCHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEcCCChhHHHHHHHHHHHHHHh
Confidence 45566666 35678899999974
No 28
>d1y7ya1 a.35.1.3 (A:5-73) Restriction-modification controller protein C.AhdI {Aeromonas hydrophila [TaxId: 644]}
Probab=20.94 E-value=20 Score=17.02 Aligned_cols=14 Identities=7% Similarity=0.297 Sum_probs=10.1
Q ss_pred HHHHHHhhhhcCCe
Q psy511 51 KTRVMKICEGKKLS 64 (67)
Q Consensus 51 ~~Ki~KIc~~f~a~ 64 (67)
...+.+||+.|+++
T Consensus 51 ~~~l~~ia~~l~v~ 64 (69)
T d1y7ya1 51 LVNILKLATALDIE 64 (69)
T ss_dssp HHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHhCcC
Confidence 45677888888765
No 29
>d1y9qa1 a.35.1.8 (A:4-82) Probable transcriptional regulator VC1968, N-terminal domain {Vibrio cholerae [TaxId: 666]}
Probab=20.78 E-value=18 Score=17.55 Aligned_cols=14 Identities=29% Similarity=0.328 Sum_probs=9.7
Q ss_pred HHHHHHhhhhcCCe
Q psy511 51 KTRVMKICEGKKLS 64 (67)
Q Consensus 51 ~~Ki~KIc~~f~a~ 64 (67)
...+.+||+.|+++
T Consensus 50 ~~~l~~ia~~l~v~ 63 (79)
T d1y9qa1 50 IATLWKIASGLEAS 63 (79)
T ss_dssp HHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHCCC
Confidence 34577788887765
No 30
>d1u8sa2 d.58.18.5 (A:88-180) putative transcriptional repressor VC2159 {Vibrio cholerae [TaxId: 666]}
Probab=20.76 E-value=33 Score=17.28 Aligned_cols=18 Identities=17% Similarity=0.329 Sum_probs=16.1
Q ss_pred HHHHHHHHHhhhhcCCee
Q psy511 48 DQLKTRVMKICEGKKLSS 65 (67)
Q Consensus 48 ~~l~~Ki~KIc~~f~a~~ 65 (67)
+.+++.+..+|+.++++.
T Consensus 69 ~~l~~~l~~l~~~l~v~~ 86 (93)
T d1u8sa2 69 MQLQEEFDALCTALDVQG 86 (93)
T ss_dssp HHHHHHHHHHHHHHTCEE
T ss_pred HHHHHHHHHHHHHceeEE
Confidence 689999999999999864
No 31
>d1p71a_ a.55.1.1 (A:) HU protein {Anabaena sp. [TaxId: 1167]}
Probab=20.43 E-value=53 Score=16.59 Aligned_cols=30 Identities=10% Similarity=0.158 Sum_probs=19.1
Q ss_pred ccCCCCCCcee--eEEEEEEEecHHHHHHHHH
Q psy511 27 LEDINSGDPVY--KSVFIIFFQGDQLKTRVMK 56 (67)
Q Consensus 27 ~~d~~~~~~~~--k~vFiv~~~G~~l~~Ki~K 56 (67)
-.||.|||.+. -.--+-|-+|..|.++|++
T Consensus 60 grNP~Tge~i~ip~k~~v~Fk~sk~Lk~~vN~ 91 (94)
T d1p71a_ 60 GRNPKTNEKMEIPATRVPAFSAGKLFREKVAP 91 (94)
T ss_dssp EECTTTCCEEEECCEEEEEEEECHHHHHHHSC
T ss_pred eECCCCCCEEEecCCceEEEecCHHHHHHhCC
Confidence 35899998531 1122334478899888864
No 32
>d1viga_ d.51.1.1 (A:) Vigilin {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.33 E-value=17 Score=17.70 Aligned_cols=17 Identities=18% Similarity=0.227 Sum_probs=13.3
Q ss_pred HHHHHHhhhhcCCeeeC
Q psy511 51 KTRVMKICEGKKLSSVV 67 (67)
Q Consensus 51 ~~Ki~KIc~~f~a~~~~ 67 (67)
++.|++|.+.++|++.+
T Consensus 24 G~~i~~I~~~tg~~I~i 40 (71)
T d1viga_ 24 GANINRIKDQYKVSVRI 40 (71)
T ss_dssp CCHHHHHHHHTCCEEEC
T ss_pred CchHHHHHHHhCCEEEe
Confidence 45788899999998753
No 33
>d1xmba2 d.58.19.1 (A:216-334) IAA-amino acid hydrolase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=20.22 E-value=31 Score=18.09 Aligned_cols=16 Identities=13% Similarity=0.162 Sum_probs=9.7
Q ss_pred HHHHHHHhhhhcCCee
Q psy511 50 LKTRVMKICEGKKLSS 65 (67)
Q Consensus 50 l~~Ki~KIc~~f~a~~ 65 (67)
+.+-++++|+.+++++
T Consensus 90 i~~~~~~~a~~~g~~~ 105 (119)
T d1xmba2 90 VKEVITKQAAVHRCNA 105 (119)
T ss_dssp HHHHHHHHHHHTTEEE
T ss_pred HHHHHHHHHHHhCCeE
Confidence 4455566667777653
No 34
>d1owfb_ a.55.1.1 (B:) Integration host factor beta subunit (IHFB) {Escherichia coli [TaxId: 562]}
Probab=20.11 E-value=53 Score=16.71 Aligned_cols=30 Identities=23% Similarity=0.346 Sum_probs=18.8
Q ss_pred ccCCCCCCceee-EEEEE-EEecHHHHHHHHH
Q psy511 27 LEDINSGDPVYK-SVFII-FFQGDQLKTRVMK 56 (67)
Q Consensus 27 ~~d~~~~~~~~k-~vFiv-~~~G~~l~~Ki~K 56 (67)
-.||.|||.+.- .-..+ |-+|..|.++|++
T Consensus 61 grNP~Tge~i~ip~k~~v~Fk~sk~lk~~vN~ 92 (94)
T d1owfb_ 61 GRNPKTGDKVELEGKYVPHFKPGKELRDRANI 92 (94)
T ss_dssp EECTTTCCEEEECCEEEEEEEECHHHHHHHCC
T ss_pred ccCCCCCCEEEecCcccEEEecCHHHHHHHcc
Confidence 358999985321 12234 4478899888763
Done!