Query psy5110
Match_columns 284
No_of_seqs 167 out of 1886
Neff 8.7
Searched_HMMs 29240
Date Fri Aug 16 17:31:39 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5110.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/5110hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4fke_A Aminopeptidase N; zinc 100.0 1.7E-51 5.6E-56 413.6 16.1 259 8-282 174-483 (909)
2 3se6_A Endoplasmic reticulum a 100.0 2.5E-50 8.6E-55 405.2 17.1 245 7-268 226-494 (967)
3 2xdt_A Endoplasmic reticulum a 100.0 7.8E-49 2.7E-53 393.5 20.0 245 8-269 165-433 (897)
4 1z5h_A Tricorn protease intera 100.0 4.6E-49 1.6E-53 390.1 15.2 255 8-281 128-414 (780)
5 3ebh_A PFA-M1, M1 family amino 100.0 5.1E-47 1.7E-51 375.9 16.4 244 11-271 155-427 (889)
6 3u9w_A Leukotriene A-4 hydrola 100.0 2.6E-47 8.8E-52 368.7 5.8 254 8-281 161-449 (608)
7 3b34_A Aminopeptidase N; prote 100.0 4.3E-45 1.5E-49 363.7 16.0 253 12-281 175-464 (891)
8 2gtq_A Aminopeptidase N; alani 100.0 8.9E-45 3E-49 361.8 17.0 254 11-281 149-439 (867)
9 2xq0_A LTA-4 hydrolase, leukot 100.0 3E-45 1E-49 355.3 9.2 250 8-281 173-458 (632)
10 3cia_A Cold-active aminopeptid 100.0 1.2E-44 4.2E-49 349.8 9.8 241 7-270 172-427 (605)
11 4fgm_A Aminopeptidase N family 99.9 2.7E-22 9.3E-27 192.5 13.8 221 33-271 168-426 (597)
12 2y3u_A Collagenase, collagenas 85.8 0.38 1.3E-05 47.1 2.8 39 128-166 422-469 (785)
13 2ejq_A Hypothetical protein TT 77.4 1.1 3.8E-05 33.8 2.1 28 124-152 85-112 (130)
14 1u4g_A Elastase, pseudolysin; 76.2 2.2 7.4E-05 36.9 3.9 97 66-172 73-179 (301)
15 3cqb_A Probable protease HTPX 75.0 1.6 5.5E-05 31.5 2.4 20 124-143 79-98 (107)
16 2vqx_A Metalloproteinase; ther 72.7 2.5 8.6E-05 37.2 3.4 44 129-172 157-201 (341)
17 1bqb_A Protein (aureolysin); h 70.9 2.6 8.9E-05 36.4 3.1 39 129-167 139-178 (301)
18 3dnz_A Thermolysin; hydrolase, 67.1 3.5 0.00012 35.8 3.1 102 65-171 69-180 (316)
19 4ger_A Gentlyase metalloprotea 65.6 4.4 0.00015 35.0 3.4 40 129-168 130-170 (304)
20 3c37_A Peptidase, M48 family; 53.2 6.7 0.00023 32.8 2.4 20 125-144 97-116 (253)
21 2ddf_A ADAM 17; hydrolase; HET 49.5 8.2 0.00028 32.2 2.3 14 128-142 182-195 (257)
22 1bud_A Protein (acutolysin A); 49.0 7.7 0.00026 31.0 2.0 15 127-142 132-146 (197)
23 1atl_A Atrolysin C; metalloend 48.8 7.8 0.00027 31.1 2.0 14 128-142 136-149 (202)
24 1qua_A Acutolysin-C, hemorrhag 47.8 8.2 0.00028 30.8 2.0 14 128-142 135-148 (197)
25 3nqx_A MCP-02, secreted metall 47.2 14 0.00047 31.9 3.4 43 129-171 136-179 (306)
26 2w15_A Zinc metalloproteinase 46.5 8.8 0.0003 30.7 2.0 15 127-142 135-149 (202)
27 1kuf_A Atrolysin E, metallopro 45.4 9.5 0.00032 30.6 2.0 15 127-142 137-151 (203)
28 1yp1_A FII; FII hydrolase; 1.9 45.0 9.6 0.00033 30.5 2.0 14 128-142 135-148 (202)
29 3b8z_A Protein adamts-5; alpha 44.9 9.6 0.00033 30.9 2.0 14 128-142 141-154 (217)
30 3k7l_A Atragin; SVMP, metallop 44.1 55 0.0019 29.5 7.1 15 127-142 143-157 (422)
31 3k7n_A K-like; SVMP, hydrolase 43.7 44 0.0015 29.8 6.3 15 127-142 138-152 (397)
32 2v4b_A Adamts-1; zymogen, prot 41.8 11 0.00038 32.2 2.0 14 128-142 143-156 (300)
33 2i47_A ADAM 17; TACE-inhibitor 41.4 11 0.00039 31.9 2.0 15 128-143 188-202 (288)
34 1r55_A ADAM 33; metalloproteas 40.4 12 0.00043 30.2 2.0 15 127-142 135-149 (214)
35 2rjp_A Adamts-4; metalloprotea 40.2 12 0.00041 32.2 2.0 15 127-142 142-156 (316)
36 2ero_A VAP-1, vascular apoptos 40.0 12 0.00041 33.9 2.0 14 127-140 145-158 (427)
37 3g5c_A ADAM 22; alpha/beta fol 37.9 49 0.0017 30.7 5.8 15 127-142 133-147 (510)
38 2rjq_A Adamts-5; metalloprotea 37.6 14 0.00048 32.7 2.0 13 128-140 143-155 (378)
39 2e3x_A Coagulation factor X-ac 36.2 14 0.00049 33.4 1.8 14 127-140 138-151 (427)
40 2dw0_A Catrocollastatin; apopt 34.9 16 0.00056 32.9 2.0 14 127-140 136-149 (419)
41 3e11_A Predicted zincin-like m 33.1 26 0.00089 25.4 2.5 16 125-140 87-102 (114)
42 4aw6_A CAAX prenyl protease 1 31.9 20 0.00069 33.0 2.1 21 125-145 326-346 (482)
43 4dd8_A Disintegrin and metallo 30.2 23 0.00079 28.4 2.0 14 128-142 133-146 (208)
44 4gow_A Potassium voltage-gated 23.9 17 0.00059 23.6 0.1 47 222-273 12-58 (72)
45 2jsd_A Matrix metalloproteinas 23.8 35 0.0012 25.9 1.9 13 127-139 107-119 (160)
46 2ovx_A Matrix metalloproteinas 22.6 38 0.0013 25.9 1.9 13 127-139 110-122 (159)
47 3dte_A IRRE protein; radiotole 22.5 47 0.0016 28.5 2.6 20 126-145 94-113 (301)
48 2xs4_A Karilysin protease; hyd 21.7 40 0.0014 25.8 1.9 13 127-139 114-126 (167)
49 1hy7_A Stromelysin-1, MMP-3; m 21.4 41 0.0014 26.0 1.9 13 127-139 112-124 (173)
50 1cge_A Fibroblast collagenase; 21.2 42 0.0014 25.9 1.9 12 128-139 111-122 (168)
No 1
>4fke_A Aminopeptidase N; zinc aminopeptidase, hydrolase; HET: NAG; 1.85A {Sus scrofa} PDB: 4fkh_A* 4fkk_A* 4fkn_A* 4fkf_A* 4f5c_A* 4fyt_A* 4fyr_A* 4fys_A* 4fyq_A*
Probab=100.00 E-value=1.7e-51 Score=413.59 Aligned_cols=259 Identities=23% Similarity=0.342 Sum_probs=225.8
Q ss_pred CCCceeeeCCCccC-----------------CCceeEEEecccccCceeEEEeecCCCCCcceeEEEecCCccch--HhH
Q psy5110 8 KPFRIVLCNGEPIQ-----------------GNEKVLQSVQIFKIGKWVEISVLGSPDSKKVVFSPWSVRNVRTY--YRF 68 (284)
Q Consensus 8 ~~~~~v~~~g~~~~-----------------~~~k~~~y~~~~~ig~~~~~~~~~~~~~~~v~i~v~~~~~~~~~--~~~ 68 (284)
..+++|+|||.+.. .+++|++|+++|+||+|...... .++++++++|++|+..+. +.+
T Consensus 174 p~~~~alSN~~~~~~~~~~~~~~~~~~~~f~~t~pmstYL~a~~vg~f~~~~~~---~~~g~~~~v~~~p~~~~~~~~~~ 250 (909)
T 4fke_A 174 PNNLTALSNMPPKGSSTPLAEDPNWSVTEFETTPVMSTYLLAYIVSEFQSVNET---AQNGVLIRIWARPNAIAEGHGMY 250 (909)
T ss_dssp ETTSEEEESSCBSSSCEECTTCTTEEEEEBCCCCSBCGGGCCEEEESCEEEEEE---CTTSCEEEEEECHHHHHTTTTHH
T ss_pred CCCCEEEcCCcccccccceecCCCeEEEEEecCCCccceeeEEEecceEEEeec---cCCCcEEEEEEecchhhhhhHHH
Confidence 46889999986542 24568899999999999887752 345788999999986553 468
Q ss_pred HHHHHHHHHHHHHHhcCCCCCccCCceeEEEeCCCCCCcccccccccc---------CCCCcHHHHHHHHHHHHHHHHHh
Q psy5110 69 KWEKVESCEQNISRTASPLFILPLSMSLVLFLPPVSMLCSSELYGLAD---------SNRTTAAGLLENFGLVAHELAHQ 139 (284)
Q Consensus 69 ~~~~~~~~l~~~~~~~~~~~~yP~~k~diV~~P~~~~~~~mE~~gl~~---------~~~~~~~~~~~~~~~iaHEiAHq 139 (284)
+++.+++++++++++++ ++||++|+|+|++|++.. ||||||||++ +..++...+.....+||||+|||
T Consensus 251 al~~~~~~l~~~e~~~~--~~Yp~~k~d~v~vpdf~~-gaMEn~glit~~e~~ll~d~~~s~~~~~~~~~~viaHElAHq 327 (909)
T 4fke_A 251 ALNVTGPILNFFANHYN--TSYPLPKSDQIALPDFNA-GAMENWGLVTYRENALLFDPQSSSISNKERVVTVIAHELAHQ 327 (909)
T ss_dssp HHHHHHHHHHHHHHHTT--SCCSSSEEEEEEETTCTT-CEECCTTEEEEEHHHHCCCTTTCCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHhcc--CCCCCCcccEEEecCCCC-cccccCcccccccceeecCcccCChHHHHHHHHHHHHHHHhh
Confidence 99999999999999997 689999999999999864 9999999764 34455677788899999999999
Q ss_pred hhccccCcccccchhhcchHHHHHHHHHHHHhcCcchhhhHHHHHHHHHHHhhcccC-CCCcccC---CCChhhhhhccc
Q psy5110 140 WFGNYATPSWWSYAWLKESVATLFEYYVVSWVEPTWRMEDLFVVEQVQVAFNSDLKG-SHAMTSE---TTTPDSISETFD 215 (284)
Q Consensus 140 WfG~~Vt~~~w~~~WL~Eg~a~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~Pl~~~---~~~~~~~~~~~~ 215 (284)
||||+||++||+|+|||||||+|++.++.++.+|.+.+.+.|....++.++..|+.. ++|+... +.++.+++..|+
T Consensus 328 WFGnlVT~~~W~dlWLnEGFAty~e~~~~~~~~~~~~~~~~f~~~~~~~~~~~d~~~~~~pi~~~~~~v~~~~~i~~~fd 407 (909)
T 4fke_A 328 WFGNLVTLAWWNDLWLNEGFASYVEYLGADHAEPTWNLKDLIVPGDVYRVMAVDALASSHPLTTPAEEVNTPAQISEMFD 407 (909)
T ss_dssp TBTTTEEESSGGGHHHHHHHHHHHHHHHHHHHSTTSCGGGGHHHHTHHHHHHHHTSTTCCCSCCCGGGCCSHHHHHTTSS
T ss_pred hhcCeecccccCcceeehHHHHHHHHHHHHhccccccHHHhhhhhHHHHHHHHhhhcccCCccccccccCChhhHHhhhh
Confidence 999999999999999999999999999999999999888888888888999999888 8998763 567788889999
Q ss_pred ccccccHHHHHHHHHhhCChHHHHhhcCCchhhhhhhHHHHhhhcCcccccccc-------------------cccccCC
Q psy5110 216 HIIYNKGQSPAHVEISHCPQRVCLESADPPLVICLVTDKLYLRHEWGLVEVKIP-------------------IRDVPQD 276 (284)
Q Consensus 216 ~~~Y~KG~~vl~mL~~~lG~~~F~~~l~~~l~~~~~~~~y~~~~~~~~~~~~~~-------------------~~~~~~~ 276 (284)
.++|.||+++||||+..||+++|+++|| +|+++|+|++++.+|+ ++++|++
T Consensus 408 ~i~Y~KGa~vL~mL~~~lG~e~F~~gl~----------~Yl~~~~~~na~~~Dl~~~l~~~s~~~~~~~~~~~v~~~~~~ 477 (909)
T 4fke_A 408 SISYSKGASVIRMLSNFLTEDLFKEGLA----------SYLHAFAYQNTTYLDLWEHLQKAVDAQTSIRLPDTVRAIMDR 477 (909)
T ss_dssp HHHHHHHHHHHHHHHHHHCHHHHHHHHH----------HHHHHHTTEEECHHHHHHHHHHHHHTCSSCCCSSCHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHhHHHHHHHHHH----------HHHHhhcccCCCHHHHHHHHHHHhCcccccccchhHHhHhhC
Confidence 9999999999999999999999999999 9999999999887653 4568999
Q ss_pred CCCCCC
Q psy5110 277 PCVNPP 282 (284)
Q Consensus 277 w~~~~~ 282 (284)
|+.||-
T Consensus 478 W~~q~G 483 (909)
T 4fke_A 478 WTLQMG 483 (909)
T ss_dssp HHSSCS
T ss_pred ccccCC
Confidence 999974
No 2
>3se6_A Endoplasmic reticulum aminopeptidase 2; thermolysin-like catalytic domain, zinc BIND glycosylation, hydrolase; HET: LYS NAG MES MAN; 3.08A {Homo sapiens} PDB: 4e36_A*
Probab=100.00 E-value=2.5e-50 Score=405.21 Aligned_cols=245 Identities=22% Similarity=0.315 Sum_probs=213.3
Q ss_pred CCCCceeeeCCCccC--------------CCceeEEEecccccCceeEEEeecCCCCCcceeEEEecCCccchHhHHHHH
Q psy5110 7 YKPFRIVLCNGEPIQ--------------GNEKVLQSVQIFKIGKWVEISVLGSPDSKKVVFSPWSVRNVRTYYRFKWEK 72 (284)
Q Consensus 7 ~~~~~~v~~~g~~~~--------------~~~k~~~y~~~~~ig~~~~~~~~~~~~~~~v~i~v~~~~~~~~~~~~~~~~ 72 (284)
..++++++|||.+.+ .+.+|++|+++|+||+|..+.... ..++++++|++|+....++++++.
T Consensus 226 ~p~~~~alSN~~~~~~~~~~~g~~~~~F~~t~pmstYLva~~vg~f~~~~~~~---~~gv~v~v~~~p~~~~~~~~al~~ 302 (967)
T 3se6_A 226 RESRHIALSNMPKVKTIELEGGLLEDHFETTVKMSTYLVAYIVCDFHSLSGFT---SSGVKVSIYASPDKRNQTHYALQA 302 (967)
T ss_dssp ECTTCEEEESSCEEEEEECTTSCEEEEECCCCSBCGGGCCEEEECCEEEEEEC---TTCCEEEEEECGGGGGGGHHHHHH
T ss_pred ECCCcEEEeCCCcccceecCCCeEEEEEecCCCccceeEEEEEeceEEEEeec---CCCcEEEEEeCcchHHHHHHHHHH
Confidence 357899999998642 345788999999999999887521 235889999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCccCCceeEEEeCCCCCCccccccccccC---------CCCcHHHHHHHHHHHHHHHHHhhhcc
Q psy5110 73 VESCEQNISRTASPLFILPLSMSLVLFLPPVSMLCSSELYGLADS---------NRTTAAGLLENFGLVAHELAHQWFGN 143 (284)
Q Consensus 73 ~~~~l~~~~~~~~~~~~yP~~k~diV~~P~~~~~~~mE~~gl~~~---------~~~~~~~~~~~~~~iaHEiAHqWfG~ 143 (284)
+++++++++++|| .+||++|+|+|++|++. .|||||||+++. ..++...+..+..+||||+|||||||
T Consensus 303 ~~~~l~~~e~~fg--~~YP~~k~d~v~vPdf~-~GaMEn~Glity~e~~ll~d~~~s~~~~k~~~~~vIaHElAHqWFGn 379 (967)
T 3se6_A 303 SLKLLDFYEKYFD--IYYPLSKLDLIAIPDFA-PGAMENWGLITYRETSLLFDPKTSSASDKLWVTRVIAHELAHQWFGN 379 (967)
T ss_dssp HHHHHHHHHHHHT--CCCCSSEEEEEEESSCS-SSEECCTTEEEEEGGGTCCCTTTCCHHHHHHHHHHHHHHHGGGTBTT
T ss_pred HHHHHHHHHHhcC--CCCCcccccEEEecCCC-CcccccCCccccchhheecCcccCCHHhhHhHHHHHHHHHHHHHhcC
Confidence 9999999999997 47999999999999986 489999998642 22445566778899999999999999
Q ss_pred ccCcccccchhhcchHHHHHHHHHHHHhcCcchhhhHHHHHHHHHHHhhcccC-CCCcccCCCChhhhhhcccccccccH
Q psy5110 144 YATPSWWSYAWLKESVATLFEYYVVSWVEPTWRMEDLFVVEQVQVAFNSDLKG-SHAMTSETTTPDSISETFDHIIYNKG 222 (284)
Q Consensus 144 ~Vt~~~w~~~WL~Eg~a~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~Pl~~~~~~~~~~~~~~~~~~Y~KG 222 (284)
+||++||+|+|||||||+|++.+++++.+|++...+.| ...++.++..|+.. .+|+...+.++.++...|+.++|.||
T Consensus 380 lVT~~wW~dlWLnEGFAty~e~~~~~~~~p~~~~~~~~-~~~~~~al~~D~~~~~~Pi~~~v~~~~~i~~~Fd~i~Y~KG 458 (967)
T 3se6_A 380 LVTMEWWNDIWLNEGFAKYMELIAVNATYPELQFDDYF-LNVCFEVITKDSLNSSRPISKPAETPTQIQEMFDEVSYNKG 458 (967)
T ss_dssp TEEESSGGGTHHHHHHHHHHHHHHHHHHCGGGCHHHHH-HHHHHHHHTTTTSTTCCCSSCCCCSHHHHHHTSSHHHHHHH
T ss_pred ccccCCCccccHHHHHHHHHHHHHHHHhcccchHHHHH-HHHHHHHHHhhcccCCCCceeecCCHHHHHHhcchhhhhHH
Confidence 99999999999999999999999999999988776666 45577888889877 89999888889888899999999999
Q ss_pred HHHHHHHHhhCChHHHHhhcCCchhhhhhhHHHHhhhcCccccccc
Q psy5110 223 QSPAHVEISHCPQRVCLESADPPLVICLVTDKLYLRHEWGLVEVKI 268 (284)
Q Consensus 223 ~~vl~mL~~~lG~~~F~~~l~~~l~~~~~~~~y~~~~~~~~~~~~~ 268 (284)
+++||||+..||+++|+++|| +|+++|+|++++.+|
T Consensus 459 a~vL~mL~~~lG~e~F~~gLr----------~Yl~~~~~~nat~~D 494 (967)
T 3se6_A 459 ACILNMLKDFLGEEKFQKGII----------QYLKKFSYRNAKNDD 494 (967)
T ss_dssp HHHHHHHHHHHCHHHHHHHHH----------HHHHHHTTEEECHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHH----------HHHHHhccCCCCHHH
Confidence 999999999999999999999 899999999876544
No 3
>2xdt_A Endoplasmic reticulum aminopeptidase 1; glycoprotein, metal-binding, metalloprotease, protease, hydrolase, adaptive immunity; HET: NAG; 2.70A {Homo sapiens} PDB: 2yd0_A* 3qnf_A* 3mdj_A*
Probab=100.00 E-value=7.8e-49 Score=393.49 Aligned_cols=245 Identities=23% Similarity=0.344 Sum_probs=214.5
Q ss_pred CCCceeeeCCCccC--------------CCceeEEEecccccCceeEEEeecCCCCCcceeEEEecCCccchHhHHHHHH
Q psy5110 8 KPFRIVLCNGEPIQ--------------GNEKVLQSVQIFKIGKWVEISVLGSPDSKKVVFSPWSVRNVRTYYRFKWEKV 73 (284)
Q Consensus 8 ~~~~~v~~~g~~~~--------------~~~k~~~y~~~~~ig~~~~~~~~~~~~~~~v~i~v~~~~~~~~~~~~~~~~~ 73 (284)
..+++++|||..++ .+.+|++|+++|+||+|...... ...++++++|++|+..+.++++++.+
T Consensus 165 p~~~~alSN~~~~~~~~~~~g~~~~~f~~t~pmstYL~a~~vg~f~~~~~~---~~~gv~v~v~~~~~~~~~~~~al~~~ 241 (897)
T 2xdt_A 165 EPRHLAISNMPLVKSVTVAEGLIEDHFDVTVKMSTYLVAFIISDFESVSKI---TKSGVKVSVYAVPDKINQADYALDAA 241 (897)
T ss_dssp CTTCEEEESSCEEEEEEEETTEEEEEECCCCSBCGGGCCEEEECCEEEEEE---CTTCCEEEEEECTTTGGGCHHHHHHH
T ss_pred cCCceEecCCCccceEecCCCEEEEEEeCCCccchhheEEEEEcceeeccc---cCCCeeEEEEcCCChHHHHHHHHHHH
Confidence 46899999997542 34578889999999999888752 23468899999999999999999999
Q ss_pred HHHHHHHHHhcCCCCCccCCceeEEEeCCCCCCccccccccccC---------CCCcHHHHHHHHHHHHHHHHHhhhccc
Q psy5110 74 ESCEQNISRTASPLFILPLSMSLVLFLPPVSMLCSSELYGLADS---------NRTTAAGLLENFGLVAHELAHQWFGNY 144 (284)
Q Consensus 74 ~~~l~~~~~~~~~~~~yP~~k~diV~~P~~~~~~~mE~~gl~~~---------~~~~~~~~~~~~~~iaHEiAHqWfG~~ 144 (284)
++++++++++|| .+||++|+|+|++|++.. |||||||+++. ..++...+..+..+||||+|||||||+
T Consensus 242 ~~~l~~~e~~fg--~~YP~~k~d~v~vpdf~~-GaMEn~glit~~e~~ll~~~~~~~~~~~~~~~~viaHElAHqWFGnl 318 (897)
T 2xdt_A 242 VTLLEFYEDYFS--IPYPLPKQDLAAIPDFQS-GAMENWGLTTYRESALLFDAEKSSASSKLGITMTVAHELAHQWFGNL 318 (897)
T ss_dssp HHHHHHHHHHTT--CCCCSSEEEEEEESSCSS-SEECCTTEEEEEGGGTCCCTTTCCHHHHHHHHHHHHHHHHTTTBTTT
T ss_pred HHHHHHHHHHhC--CCCCccceeEEEeCCCcc-cchhcCCeeEEeeeeEeECCCCCcHHHHHHHHHHHHHHHHHHHcCCE
Confidence 999999999997 479999999999999864 89999998642 223345666788999999999999999
Q ss_pred cCcccccchhhcchHHHHHHHHHHHHhcCcchhhhHHHHHHHHHHHhhcccC-CCCcccCCCChhhhhhcccccccccHH
Q psy5110 145 ATPSWWSYAWLKESVATLFEYYVVSWVEPTWRMEDLFVVEQVQVAFNSDLKG-SHAMTSETTTPDSISETFDHIIYNKGQ 223 (284)
Q Consensus 145 Vt~~~w~~~WL~Eg~a~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~Pl~~~~~~~~~~~~~~~~~~Y~KG~ 223 (284)
||++||+|+|||||||+|++.+++++.+|++.+.+.| .+.++.++..|+.. .+|+...+.+|+++...|+.++|.||+
T Consensus 319 VT~~~W~dlWLnEGfAty~e~~~~~~~~~~~~~~~~f-~~~~~~a~~~D~~~~~~Pi~~~v~~p~~i~~~fd~i~Y~KGa 397 (897)
T 2xdt_A 319 VTMEWWNDLWLNEGFAKFMEFVSVSVTHPELKVGDYF-FGKCFDAMEVDALNSSHPVSTPVENPAQIREMFDDVSYDKGA 397 (897)
T ss_dssp EEESSGGGTHHHHHHHHHHHHHHHHHHCGGGCGGGGH-HHHHHHHHHHHTSTTCCCSSCCCCSHHHHHHTSSHHHHHHHH
T ss_pred eccCCcchhhhhHHHHHHHHHHHHHHhCCcchHHHHH-HHHHHHHHHhhcccCCCCCEEeCCCHHHHHHhcchhhhhhHH
Confidence 9999999999999999999999999999988877888 77788899889887 999998888888888899999999999
Q ss_pred HHHHHHHhhCChHHHHhhcCCchhhhhhhHHHHhhhcCcccccccc
Q psy5110 224 SPAHVEISHCPQRVCLESADPPLVICLVTDKLYLRHEWGLVEVKIP 269 (284)
Q Consensus 224 ~vl~mL~~~lG~~~F~~~l~~~l~~~~~~~~y~~~~~~~~~~~~~~ 269 (284)
++||||+..||+++|+++|| +|+++|+|++++.+|+
T Consensus 398 ~vl~mL~~~lG~e~F~~gl~----------~Yl~~~~~~~a~~~Dl 433 (897)
T 2xdt_A 398 CILNMLREYLSADAFKSGIV----------QYLQKHSYKNTKNEDL 433 (897)
T ss_dssp HHHHHHHHHSCHHHHHHHHH----------HHHHHHTTEEECHHHH
T ss_pred HHHHHHHHHhCHHHHHHHHH----------HHHHHhccCCCCHHHH
Confidence 99999999999999999999 8999999998765443
No 4
>1z5h_A Tricorn protease interacting factor F3; zinc aminopeptidase, gluzicins, superhelix, hydrolase; 2.30A {Thermoplasma acidophilum} PDB: 1z1w_A 3q7j_A*
Probab=100.00 E-value=4.6e-49 Score=390.08 Aligned_cols=255 Identities=22% Similarity=0.301 Sum_probs=220.4
Q ss_pred CCCceeeeCCCccC------------CCceeEEEecccccCceeEEEeecCCCCCcceeEEEecCCccchHhHHHHHHHH
Q psy5110 8 KPFRIVLCNGEPIQ------------GNEKVLQSVQIFKIGKWVEISVLGSPDSKKVVFSPWSVRNVRTYYRFKWEKVES 75 (284)
Q Consensus 8 ~~~~~v~~~g~~~~------------~~~k~~~y~~~~~ig~~~~~~~~~~~~~~~v~i~v~~~~~~~~~~~~~~~~~~~ 75 (284)
..+++++|||...+ .+.+|++|++++++|+|....... + ++++++|++|+ +.++++++.+++
T Consensus 128 p~~~~~lSN~~~~~~~~~g~~~~~f~~t~~mstYL~a~~vg~f~~~~~~~---~-gv~~~v~~~~~--~~~~~al~~~~~ 201 (780)
T 1z5h_A 128 DKDYDAISNMPPKRIEVSERKVVEFQDTPRMSTYLLYVGIGKFRYEYEKY---R-DIDLILASLKD--IRSKYPLDMARK 201 (780)
T ss_dssp CTTCEEEESSCEEEEEESSSEEEEECCCCSBCGGGCCEEEECCEEEEEEE---T-TEEEEEEESSC--CCCSHHHHHHHH
T ss_pred CCCCEEEeCCccccccCCCceEEEEecCCcccceEEEEEEeccEEEeecc---C-CeeEEEEEccc--hhHHHHHHHHHH
Confidence 46899999997542 345688899999999998887531 2 68899999998 667899999999
Q ss_pred HHHHHHHhcCCCCCccCCceeEEEeCCCCCCccccccccccC--------CCCcHHHHHHHHHHHHHHHHHhhhccccCc
Q psy5110 76 CEQNISRTASPLFILPLSMSLVLFLPPVSMLCSSELYGLADS--------NRTTAAGLLENFGLVAHELAHQWFGNYATP 147 (284)
Q Consensus 76 ~l~~~~~~~~~~~~yP~~k~diV~~P~~~~~~~mE~~gl~~~--------~~~~~~~~~~~~~~iaHEiAHqWfG~~Vt~ 147 (284)
++++++++|| .+||++|+|+|++|++. .|||||+|+++. ..++...+.....+||||+|||||||+||+
T Consensus 202 ~l~~~e~~fg--~~YP~~k~d~v~vpdf~-~GaMEn~glit~~e~~ll~~~~~~~~~~~~~~~viaHElaHqWfGnlVT~ 278 (780)
T 1z5h_A 202 SVEFYENYFG--IPYALPKMHLISVPEFG-AGAMENWGAITFREIYMDIAENSAVTVKRNSANVIAHEIAHQWFGDLVTM 278 (780)
T ss_dssp HHHHHHHHHS--SCCSSSEEEEEEETTCT-TCEECCTTEEEEEHHHHSCCTTSCHHHHHHHHHHHHHHHHHTTBTTTEEE
T ss_pred HHHHHHHHhC--CCCCCccCCEEEcCCCC-CCcccccCeeEeecceEeecCCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Confidence 9999999997 47999999999999986 589999998642 233445566788999999999999999999
Q ss_pred ccccchhhcchHHHHHHHHHHHHhcCcchhhhHHHHHHHHHHHhhcccC-CCCcccCCCChhhhhhcccccccccHHHHH
Q psy5110 148 SWWSYAWLKESVATLFEYYVVSWVEPTWRMEDLFVVEQVQVAFNSDLKG-SHAMTSETTTPDSISETFDHIIYNKGQSPA 226 (284)
Q Consensus 148 ~~w~~~WL~Eg~a~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~Pl~~~~~~~~~~~~~~~~~~Y~KG~~vl 226 (284)
+||+|+||+||||+|++.+++++.+|++.++..|....+..++..|+.. .+|+...+.++.++...|+.++|.||+++|
T Consensus 279 ~~W~dlWLnEGfA~y~~~~~~~~~~~~~~~~~~f~~~~~~~al~~D~~~~~~pi~~~v~~~~~~~~~fd~i~Y~KGa~vl 358 (780)
T 1z5h_A 279 KWWNDLWLNESFATFMSYKTMDTLFPEWSFWGDFFVSRTSGALRSDSLKNTHPIEVDVRDPDEISQIFDEISYGKGASIL 358 (780)
T ss_dssp SSGGGHHHHHHHHHHHHHHHHHHHCTTTCHHHHHHHHTHHHHHHHTTSTTCCCSCCCCCSSCCTTTTSCHHHHHHHHHHH
T ss_pred CCcccccccHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhccCCCCceecCCCHHHHHHhcchhhhhhHHHHH
Confidence 9999999999999999999999999998877778777777888889887 899987777777778889999999999999
Q ss_pred HHHHhhCChHHHHhhcCCchhhhhhhHHHHhhhcCcccccccc-----------cccccCCCCCCC
Q psy5110 227 HVEISHCPQRVCLESADPPLVICLVTDKLYLRHEWGLVEVKIP-----------IRDVPQDPCVNP 281 (284)
Q Consensus 227 ~mL~~~lG~~~F~~~l~~~l~~~~~~~~y~~~~~~~~~~~~~~-----------~~~~~~~w~~~~ 281 (284)
|||+..||++.|+++|| +|+++|+|++++.+|+ +++++++|+.|+
T Consensus 359 ~mL~~~lG~e~F~~~l~----------~yl~~~~~~~~t~~Dl~~~l~~~sg~dl~~~~~~W~~~~ 414 (780)
T 1z5h_A 359 RMIEDYAGYEEFRKGIS----------KYLNDHKFGNAEGSDLWTAIEDVSGKPVKRVMEYWIKNP 414 (780)
T ss_dssp HHHHHHHCHHHHHHHHH----------HHHHHHTTEEECHHHHHHHHHHHHCSCHHHHHHHHHHSC
T ss_pred HHHHHHhCHHHHHHHHH----------HHHHHhccCCCCHHHHHHHHHHHhCCCHHHHHHHHHhCC
Confidence 99999999999999999 9999999999887754 456788998776
No 5
>3ebh_A PFA-M1, M1 family aminopeptidase; hydrolase, metal-binding, metalloprotease, P hydrolase inhibitor; HET: BES; 1.65A {Plasmodium falciparum} PDB: 3ebg_A* 3ebi_A* 3q43_A* 3q44_A* 3t8v_A*
Probab=100.00 E-value=5.1e-47 Score=375.91 Aligned_cols=244 Identities=16% Similarity=0.120 Sum_probs=197.6
Q ss_pred ce-eeeCCCccC-----CC---------ceeEEEecccccCceeEEEee-cCC-CCCcceeEEEecCCccchHhHHHHHH
Q psy5110 11 RI-VLCNGEPIQ-----GN---------EKVLQSVQIFKIGKWVEISVL-GSP-DSKKVVFSPWSVRNVRTYYRFKWEKV 73 (284)
Q Consensus 11 ~~-v~~~g~~~~-----~~---------~k~~~y~~~~~ig~~~~~~~~-~~~-~~~~v~i~v~~~~~~~~~~~~~~~~~ 73 (284)
++ ++|||.+++ .+ .+|++|+++++||+|...... .+. +|++|++++|++|+..+.++++++.+
T Consensus 155 ~~valSNg~l~~~~~~~~g~~~~~f~~t~pmstYLvA~~vG~f~~~~~~~~t~~~G~~v~l~vy~~p~~~~~~~~al~~~ 234 (889)
T 3ebh_A 155 YPVLLSNGDKVNEFEIPGGRHGARFNDPPLKPCYLFAVVAGDLKHLSATYITKYTKKKVELYVFSEEKYVSKLQWALECL 234 (889)
T ss_dssp CCEEEESSEEEEEEEETTTEEEEEEEEEEEECGGGCCEEEECEEEEEEEEECSSSCCEEEEEEEEEGGGGGGGHHHHHHH
T ss_pred CeEEEccCccccceecCCCeEEEEEecCCccchhheeeEEecceEEeeeeeecCCCCceEEEEEeccCcHHHHHHHHHHH
Confidence 64 699997652 12 356789999999999988752 233 67789999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCCccCCceeEEEeCCCCCCccccccccccC---------CCCcHHHHHHHHHHHHHHHHHhhhccc
Q psy5110 74 ESCEQNISRTASPLFILPLSMSLVLFLPPVSMLCSSELYGLADS---------NRTTAAGLLENFGLVAHELAHQWFGNY 144 (284)
Q Consensus 74 ~~~l~~~~~~~~~~~~yP~~k~diV~~P~~~~~~~mE~~gl~~~---------~~~~~~~~~~~~~~iaHEiAHqWfG~~ 144 (284)
++++++++++|| .+||++|+++|++|++.. |||||||+++. ...+......+..+||||+|||||||+
T Consensus 235 ~~~l~~~e~~fG--~pYP~~kyd~VavPdF~~-GaMEN~GLvtf~e~~lL~~~~~~t~~~~~~i~~vIAHElAHQWFGNl 311 (889)
T 3ebh_A 235 KKSMAFDEDYFG--LEYDLSRLNLVAVSDFNV-GAMENKGLNIFNANSLLASKKNSIDFSYARILTVVGHEYFHQYTGNR 311 (889)
T ss_dssp HHHHHHHHHHHC--CCCCSSEEEEEEESCCSS-SEECCTTEEEEEGGGTCCCTTTSCTHHHHHHHHHHHHHHHTTTBTTT
T ss_pred HHHHHHHHHHHC--CCCCCCceEEEEeccccc-hhhcCCceeEecccccccCcccCcHHHHHHHHHHHHHHHHHHHhcCe
Confidence 999999999998 479999999999999864 89999998632 122334556678999999999999999
Q ss_pred cCcccccchhhcchHHHHHHHHHHHHhcCcch--hhhHHHHHHHHHHHhhcccC-CCCcccCCCChhhhhhccccccccc
Q psy5110 145 ATPSWWSYAWLKESVATLFEYYVVSWVEPTWR--MEDLFVVEQVQVAFNSDLKG-SHAMTSETTTPDSISETFDHIIYNK 221 (284)
Q Consensus 145 Vt~~~w~~~WL~Eg~a~y~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~d~~~-~~Pl~~~~~~~~~~~~~~~~~~Y~K 221 (284)
||++||+|+|||||||+|++.++.++..+... +.+... ....++..|+.. .+|+.. .++.+++..|+.++|.|
T Consensus 312 VT~~~W~dlWLnEGFAtY~e~~~~~~~~~~~~~r~~~~~~--lr~~~~~~D~~~~shPI~~--~~~~ei~~~f~~i~Y~K 387 (889)
T 3ebh_A 312 VTLRDWFQLTLKEGLTVHRENLFSEEMTKTVTTRLSHVDL--LRSVQFLEDSSPLSHPIRP--ESYVSMENFYTTTVYDK 387 (889)
T ss_dssp BEESSGGGHHHHHHHHHHHHHHHHHHHHCCTHHHHHHHHH--HHHHHHHHHTSTTCCCSSC--SEESCGGGCCCHHHHHH
T ss_pred eeecccccceeeHHHHHHHHHHHHHHhcCHHHHHHHHHHH--HHHHhhhhccCccCCCCCC--cchhhhhhhccchhhhH
Confidence 99999999999999999999999988876532 111111 112356678766 888864 23345667899999999
Q ss_pred HHHHHHHHHhhCChHHHHhhcCCchhhhhhhHHHHhhhcCcccccccccc
Q psy5110 222 GQSPAHVEISHCPQRVCLESADPPLVICLVTDKLYLRHEWGLVEVKIPIR 271 (284)
Q Consensus 222 G~~vl~mL~~~lG~~~F~~~l~~~l~~~~~~~~y~~~~~~~~~~~~~~~~ 271 (284)
|+++||||+..||+++|+++|| .|+++|+|++++.+|+++
T Consensus 388 Ga~vLrML~~~lGde~F~~gLr----------~Yl~~~~~~natt~Df~~ 427 (889)
T 3ebh_A 388 GSEVMRMYLTILGEEYYKKGFD----------IYIKKNDGNTATCEDFNY 427 (889)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH----------HHHHHHTTSEECHHHHHH
T ss_pred HHHHHHHHHHHhCHHHHHHHHH----------HHHHHcCCCCCCHHHHHH
Confidence 9999999999999999999999 999999999988766543
No 6
>3u9w_A Leukotriene A-4 hydrolase; hydrolase-hydrolase inhibitor complex; HET: 28P; 1.25A {Homo sapiens} PDB: 3cho_A* 3chp_A* 3chq_A* 3chr_A* 3chs_A* 3fun_A* 1hs6_A* 2vj8_A* 3fh7_A* 3fh8_A* 3fhe_A* 3fts_A* 3ftu_A* 3ftv_A* 3ftw_A* 3ftx_A* 3fty_A* 3ftz_A* 3fu0_A* 3fu3_A* ...
Probab=100.00 E-value=2.6e-47 Score=368.66 Aligned_cols=254 Identities=15% Similarity=0.075 Sum_probs=197.6
Q ss_pred CCCceeeeCCCccC-------CC---------ceeEEEecccccCceeEEEeecCCCCCcceeEEEecCCccchHhHHHH
Q psy5110 8 KPFRIVLCNGEPIQ-------GN---------EKVLQSVQIFKIGKWVEISVLGSPDSKKVVFSPWSVRNVRTYYRFKWE 71 (284)
Q Consensus 8 ~~~~~v~~~g~~~~-------~~---------~k~~~y~~~~~ig~~~~~~~~~~~~~~~v~i~v~~~~~~~~~~~~~~~ 71 (284)
..+++|++||...+ .+ ..|++|+++|+||+|..... ++++++|++|+..+.+.++++
T Consensus 161 p~~~~alsng~~~~~~~~~~~~~~~~~~f~~t~pmstYL~a~~vg~f~~~~~-------~~~~~v~~~p~~~~~~~~~~~ 233 (608)
T 3u9w_A 161 PKELVALMSAIRDGETPDPEDPSRKIYKFIQKVPIPCYLIALVVGALESRQI-------GPRTLVWSEKEQVEKSAYEFS 233 (608)
T ss_dssp ETTSEEEESSEEEEEEECTTCTTEEEEEEEEEEEECGGGCCEEEESCEEEEE-------ETTEEEEECHHHHHHHHHHTT
T ss_pred CcceeeeeeccccceeeccCCCCeEEEEEEecCCcccEEEEEEEeeeeeEec-------CCceEEEeChhhHHHHHHHHH
Confidence 36789999996431 22 34667888899999876653 345699999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCCccCCceeEEEeCCCCCCccccccccccCCCCcHHHHHHHHHHHHHHHHHhhhccccCccccc
Q psy5110 72 KVESCEQNISRTASPLFILPLSMSLVLFLPPVSMLCSSELYGLADSNRTTAAGLLENFGLVAHELAHQWFGNYATPSWWS 151 (284)
Q Consensus 72 ~~~~~l~~~~~~~~~~~~yP~~k~diV~~P~~~~~~~mE~~gl~~~~~~~~~~~~~~~~~iaHEiAHqWfG~~Vt~~~w~ 151 (284)
.++++++++++++| +||++++++|++|+....|||||+|++....+.......+..+||||+|||||||+||++||+
T Consensus 234 ~~~~~l~~~e~~~g---~Yp~~~~~~vv~~p~f~~GgMEn~gl~~~~~~~l~~~~~~~~viaHElAHqWfGnlVT~~~W~ 310 (608)
T 3u9w_A 234 ETESMLKIAEDLGG---PYVWGQYDLLVLPPSFPYGGMENPCLTFVTPTLLAGDKSLSNVIAHEISHSWTGNLVTNKTWD 310 (608)
T ss_dssp THHHHHHHHHHHHC---CCCSSCCEEEECCTTCSSSEECCTTEEEECGGGCCSSSTTTHHHHHHHHTTTBTTTEEESSGG
T ss_pred HHHHHHHhHHhcCC---CCCchhhceeeecccccchhhhcCcceeeeeeeecccchhHHHHHHHhhhhhhcCcCcccccc
Confidence 99999999999985 699999999998654456999999998654444444445678999999999999999999999
Q ss_pred chhhcchHHHHHHHHHHHHhcCcchhhhHHHHHHHHHHHhhcccC-CCCcccCCCChhhh--hhcccccccccHHHHHHH
Q psy5110 152 YAWLKESVATLFEYYVVSWVEPTWRMEDLFVVEQVQVAFNSDLKG-SHAMTSETTTPDSI--SETFDHIIYNKGQSPAHV 228 (284)
Q Consensus 152 ~~WL~Eg~a~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~Pl~~~~~~~~~~--~~~~~~~~Y~KG~~vl~m 228 (284)
|+|||||||+|++.+++++.+|+......+...........|... ++|+...+.++.++ +..|+.++|.||+++|||
T Consensus 311 d~WLnEGfAty~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~f~~i~Y~KGa~vL~m 390 (608)
T 3u9w_A 311 HFWLNEGHTVYLERHICGRLFGEKFRHFNALGGWGELQNSVKTFGETHPFTKLVVDLTDIDPDVAYSSVPYEKGFALLFY 390 (608)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCGGGSSSCCCTTCCHHHHCSSHHHHHHHHHHHH
T ss_pred chhHHHhHHHHHHHHHHHHHccchhhHHHHHHHHHHHHHHHhhhhccCCccccccccccCChhhcccHHHHhHHHHHHHH
Confidence 999999999999999999999875443333222222222334444 67776654443332 457999999999999999
Q ss_pred HHhhCC-hHHHHhhcCCchhhhhhhHHHHhhhcCccccccccccc---------------ccCCCCCCC
Q psy5110 229 EISHCP-QRVCLESADPPLVICLVTDKLYLRHEWGLVEVKIPIRD---------------VPQDPCVNP 281 (284)
Q Consensus 229 L~~~lG-~~~F~~~l~~~l~~~~~~~~y~~~~~~~~~~~~~~~~~---------------~~~~w~~~~ 281 (284)
|+..|| ++.|+++|| .|+++|+|++++.+|+++- .+++|+.||
T Consensus 391 L~~~lG~~~~F~~~lr----------~Yl~~~~~~~~tt~Df~~~l~~~~~~~~~~~~~~~~~~W~~~~ 449 (608)
T 3u9w_A 391 LEQLLGGPEIFLGFLK----------AYVEKFSYKSITTDDWKDFLYSYFKDKVDVLNQVDWNAWLYSP 449 (608)
T ss_dssp HHHHHTCHHHHHHHHH----------HHHHHHTTEEECHHHHHHHHHHHTGGGHHHHHTSCHHHHHHCC
T ss_pred HHHHhCCHHHHHHHHH----------HHHHhccCCCCCHHHHHHHHHHHhccccchhhHHHHHHHhcCC
Confidence 999998 678999999 9999999999988775432 267787776
No 7
>3b34_A Aminopeptidase N; protease, hydrolase, thermolysin, phenylal membrane, metal-binding, metalloprotease; HET: PHE; 1.30A {Escherichia coli K12} PDB: 2hpt_A* 3b2p_A* 2hpo_A* 3b2x_A* 3b37_A* 3b3b_A* 3ked_A* 3qjx_A 3puu_A 2dq6_A 2dqm_A* 2zxg_A*
Probab=100.00 E-value=4.3e-45 Score=363.68 Aligned_cols=253 Identities=13% Similarity=0.144 Sum_probs=202.5
Q ss_pred eeeeCCCccC-----CC---------ceeEEEecccccCceeEEEe-ecCCCCCcceeEEEecCCccchHhHHHHHHHHH
Q psy5110 12 IVLCNGEPIQ-----GN---------EKVLQSVQIFKIGKWVEISV-LGSPDSKKVVFSPWSVRNVRTYYRFKWEKVESC 76 (284)
Q Consensus 12 ~v~~~g~~~~-----~~---------~k~~~y~~~~~ig~~~~~~~-~~~~~~~~v~i~v~~~~~~~~~~~~~~~~~~~~ 76 (284)
+++|||.+++ .+ .+|++|+++|+||+|..... ..+.++++|++++|++|+..+.++++++.++++
T Consensus 175 ~alSNg~l~~~~~~~~g~~~~~f~~t~pmstYL~A~~vG~f~~~~~~~~t~~g~~v~l~vy~~p~~~~~~~~al~~~~~~ 254 (891)
T 3b34_A 175 FLLSNGNRVAQGELENGRHWVQWQDPFPKPCYLFALVAGDFDVLRDTFTTRSGREVALELYVDRGNLDRAPWAMTSLKNS 254 (891)
T ss_dssp EEEESSEEEEEEECSTTEEEEEEEEEEEECGGGCCEEEECCEEEEEEEECTTCCEEEEEEEECTTCGGGCHHHHHHHHHH
T ss_pred EEEeCCccccceeecCCeEEEEEEeCCCccceeeEEEeccceEEeeeeeccCCCceEEEEEeccCcHHHHHHHHHHHHHH
Confidence 8899998653 22 24567889999999988875 234567789999999999999999999999999
Q ss_pred HHHHHHhcCCCCCccCCceeEEEeCCCCCCccccccccccC---------CCCcHHHHHHHHHHHHHHHHHhhhccccCc
Q psy5110 77 EQNISRTASPLFILPLSMSLVLFLPPVSMLCSSELYGLADS---------NRTTAAGLLENFGLVAHELAHQWFGNYATP 147 (284)
Q Consensus 77 l~~~~~~~~~~~~yP~~k~diV~~P~~~~~~~mE~~gl~~~---------~~~~~~~~~~~~~~iaHEiAHqWfG~~Vt~ 147 (284)
+++++++|| .+||++|+++|++|++.. |||||+|+++. ...+......+..+||||+|||||||+||+
T Consensus 255 l~~~e~~fG--~pYP~~k~diVavPdf~~-GaMEn~GLitf~e~~lL~~~~~~t~~~~~~i~~vIAHElAHqWFGNlVT~ 331 (891)
T 3b34_A 255 MKWDEERFG--LEYDLDIYMIVAVDFFNM-GAMENKGLNIFNSKYVLARTDTATDKDYLDIERVIGHEYFHNWTGNRVTC 331 (891)
T ss_dssp HHHHHHHHC--CCCCSSEEEEEEESCCSS-SEECCTTEEEEEGGGTCCCTTTCCHHHHHHHHHHHHHHHHTTTBTTTEEE
T ss_pred HHHHHHHhC--CCCCCcceeEEEcCCCCc-CccccCceeEecccccccCcccCcHHHHHHHHHHHHHHHHHHHhCCCCcc
Confidence 999999998 379999999999999874 89999998632 122334556778999999999999999999
Q ss_pred ccccchhhcchHHHHHHHHHHHHhcCcchhhhHHH-HHHH-HHHHhhcccC-CCCcccCCCChhhhhhcccccccccHHH
Q psy5110 148 SWWSYAWLKESVATLFEYYVVSWVEPTWRMEDLFV-VEQV-QVAFNSDLKG-SHAMTSETTTPDSISETFDHIIYNKGQS 224 (284)
Q Consensus 148 ~~w~~~WL~Eg~a~y~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~d~~~-~~Pl~~~~~~~~~~~~~~~~~~Y~KG~~ 224 (284)
+||+++||+||||+|++.++.++..+... ..+. ...+ ...+..|+.. .+|+... ++.+++..|+.++|.||++
T Consensus 332 ~~W~dlWLnEGFAtY~e~~~~~~~~~~~~--~~~~~~~~l~~~~~~~D~~~~~~Pi~~~--~~~~i~~~f~~i~Y~KGa~ 407 (891)
T 3b34_A 332 RDWFQLSLKEGLTVFRDQEFSSDLGSRAV--NRINNVRTMRGLQFAEDASPMAHPIRPD--MVIEMNNFYTLTVYEKGAE 407 (891)
T ss_dssp SSGGGHHHHHHHHHHHHHHHHHHHSCHHH--HHHHHHHHHHHTHHHHHTSTTCCCSSCS--EESCGGGGCCHHHHHHHHH
T ss_pred cchhhceehHHHHHHHHHHHHHHHhCHHH--HHHHHHHHHHHhhhhhhccccCCCCccc--cccccccccccchhhHHHH
Confidence 99999999999999999999988876421 1111 1111 1245667776 8888642 3445667899999999999
Q ss_pred HHHHHHhhCChHHHHhhcCCchhhhhhhHHHHhhhcCcccccccccccc----------cCCCCCCC
Q psy5110 225 PAHVEISHCPQRVCLESADPPLVICLVTDKLYLRHEWGLVEVKIPIRDV----------PQDPCVNP 281 (284)
Q Consensus 225 vl~mL~~~lG~~~F~~~l~~~l~~~~~~~~y~~~~~~~~~~~~~~~~~~----------~~~w~~~~ 281 (284)
+||||+..||+++|+++|| .|+++|++++++.+|+++-+ ++.|+.|+
T Consensus 408 VLrML~~~lG~e~F~~gLr----------~Yl~~~~~~~att~Df~~ale~~sg~dL~~f~~W~~q~ 464 (891)
T 3b34_A 408 VIRMIHTLLGEENFQKGMQ----------LYFERHDGSAATCDDFVQAMEDASNVDLSHFRRWYSQS 464 (891)
T ss_dssp HHHHHHHHHHHHHHHHHHH----------HHHHHHTTEEECHHHHHHHHHHHHCCCCTTTTHHHHCC
T ss_pred HHHHHHHHHCHHHHHHHHH----------HHHHhccCCCCCHHHHHHHHHHHhCCCHHHHHHHHcCC
Confidence 9999999999999999999 99999999999887665422 45777665
No 8
>2gtq_A Aminopeptidase N; alanine aminopeptidase, M1 family peptidas PSI-2, structural genomics, protein structure initiative; 2.05A {Neisseria meningitidis}
Probab=100.00 E-value=8.9e-45 Score=361.78 Aligned_cols=254 Identities=15% Similarity=0.116 Sum_probs=203.1
Q ss_pred ceeeeCCCccC-----CC---------ceeEEEecccccCceeEEEee-cCCCCCcceeEEEecCCccchHhHHHHHHHH
Q psy5110 11 RIVLCNGEPIQ-----GN---------EKVLQSVQIFKIGKWVEISVL-GSPDSKKVVFSPWSVRNVRTYYRFKWEKVES 75 (284)
Q Consensus 11 ~~v~~~g~~~~-----~~---------~k~~~y~~~~~ig~~~~~~~~-~~~~~~~v~i~v~~~~~~~~~~~~~~~~~~~ 75 (284)
.+++|||.+++ .+ .+|++|+++|++|+|...... .+.+++++++++|++|+..+.++++++.+++
T Consensus 149 ~~~lSNg~l~~~~~~~~g~~~~~f~~t~pmstYL~A~~vG~f~~~~~~~~t~~g~~v~l~vy~~p~~~~~~~~al~~~~~ 228 (867)
T 2gtq_A 149 PVLLSNGNKIDGGEFSDGRHWVKWEDPFSKPSYLFALVAGDLAVTEDYFTTMSGRNVKIEFYTTEADKPKVGFAVESLKN 228 (867)
T ss_dssp CEEEESSEEEEEEECTTSEEEEEEECCSCBCGGGCCEEEECCEEEEEEEECTTSCEEEEEEEECTTTGGGCHHHHHHHHH
T ss_pred eEEEeCCccccceeecCCeEEEEEEeCCCccccceeEEEecceEeeeceeccCCCceEEEEEeccccHHHHHHHHHHHHH
Confidence 38899998653 12 346778899999999888752 2356678999999999999999999999999
Q ss_pred HHHHHHHhcCCCCCccCCceeEEEeCCCCCCccccccccccC---------CCCcHHHHHHHHHHHHHHHHHhhhccccC
Q psy5110 76 CEQNISRTASPLFILPLSMSLVLFLPPVSMLCSSELYGLADS---------NRTTAAGLLENFGLVAHELAHQWFGNYAT 146 (284)
Q Consensus 76 ~l~~~~~~~~~~~~yP~~k~diV~~P~~~~~~~mE~~gl~~~---------~~~~~~~~~~~~~~iaHEiAHqWfG~~Vt 146 (284)
++++++++|| .+||++++++|++|++.. |||||+|+++. ...+......+..+||||+|||||||+||
T Consensus 229 ~l~~~e~~fG--~pYP~~k~d~Vavpdf~~-GaMEn~glitf~e~~ll~~~~~~~~~~~~~i~~vIaHElAHqWfGnlVT 305 (867)
T 2gtq_A 229 AMKWDETRFG--LEYDLDIFMVVAVGDFNM-GAMENKGLNIFNTKFVLADSRTATDTDFEGIESVVGHEYFHNWTGNRVT 305 (867)
T ss_dssp HHHHHHHHHC--CCCCSSEEEEEEESSCSS-SEECCTTEEEEEGGGTCCCTTTCCHHHHHHHHHHHHHHHHTTTBTTTBE
T ss_pred HHHHHHHHhC--CCCCCcceeEEEcCCCCc-cccccCCceeecccccccCcccCcHHHHHHHHHHHHHHHHHHhcCcEEE
Confidence 9999999997 479999999999999875 89999998632 12233455677899999999999999999
Q ss_pred cccccchhhcchHHHHHHHHHHHHhcCcchhhhHHH-HH-HHHHHHhhcccC-CCCcccCCCChhhhhhcccccccccHH
Q psy5110 147 PSWWSYAWLKESVATLFEYYVVSWVEPTWRMEDLFV-VE-QVQVAFNSDLKG-SHAMTSETTTPDSISETFDHIIYNKGQ 223 (284)
Q Consensus 147 ~~~w~~~WL~Eg~a~y~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~d~~~-~~Pl~~~~~~~~~~~~~~~~~~Y~KG~ 223 (284)
++||+++||+||||+|++..+.++..+... ..+. .. .....+..|+.. .+|+.. .++.+++..|+.++|.||+
T Consensus 306 ~~~W~dlWLnEGfAty~e~~~~~~~~~~~~--~~~~~~~~l~~~~~~~D~~~~~~Pi~~--~~~~~i~~~f~~i~Y~KGa 381 (867)
T 2gtq_A 306 CRDWFQLSLKEGLTVFRDQEFSGDRASRAV--RRIENIRLLRQHQFPEDAGPTAHPVRP--ASYEEMNNFYTMTVYEKGA 381 (867)
T ss_dssp ESSGGGHHHHHHHHHHHHHHHHHHHSCHHH--HHHHHHHHHHHHHHHHHHSTTCCCSSC--SEESCGGGGCSHHHHHHHH
T ss_pred ecccccccchHHHHHHHHHHHHHHHcCHHH--HHHHHHHHHHHHhhhhccCccCCCCcC--CChhhhhhhccchhhhHHH
Confidence 999999999999999999999988876421 1111 11 112346667766 889874 2345566789999999999
Q ss_pred HHHHHHHhhCChHHHHhhcCCchhhhhhhHHHHhhhcCcccccccccccc----------cCCCCCCC
Q psy5110 224 SPAHVEISHCPQRVCLESADPPLVICLVTDKLYLRHEWGLVEVKIPIRDV----------PQDPCVNP 281 (284)
Q Consensus 224 ~vl~mL~~~lG~~~F~~~l~~~l~~~~~~~~y~~~~~~~~~~~~~~~~~~----------~~~w~~~~ 281 (284)
++||||+..||++.|+++|| .|+++|++++++.+|+++-+ +++|..|+
T Consensus 382 ~vl~mL~~~lG~e~F~~glr----------~Yl~~~~~~~~t~~Df~~~l~~~sg~dl~~f~~W~~q~ 439 (867)
T 2gtq_A 382 EVVRMYHTLLGEEGFQKGMK----------LYFQRHDGQAVTCDDFRAAMADANGINLDQFALWYSQA 439 (867)
T ss_dssp HHHHHHHHHHHHHHHHHHHH----------HHHHHHTTCEECHHHHHHHHHHHHTCCCGGGGHHHHCC
T ss_pred HHHHHHHHHHCHHHHHHHHH----------HHHHHhCCCCCCHHHHHHHHHHHhCCCHHHHHHHhcCC
Confidence 99999999999999999999 99999999999887665422 35777665
No 9
>2xq0_A LTA-4 hydrolase, leukotriene A-4 hydrolase; HET: BES; 1.96A {Saccharomyces cerevisiae} PDB: 2xpz_A* 2xpy_A*
Probab=100.00 E-value=3e-45 Score=355.34 Aligned_cols=250 Identities=15% Similarity=0.118 Sum_probs=193.0
Q ss_pred CCCceeeeCCCccCC------------CceeEEEecccccCceeEEEeecCCCCCcceeEEEecCCccchHhHHHH-HHH
Q psy5110 8 KPFRIVLCNGEPIQG------------NEKVLQSVQIFKIGKWVEISVLGSPDSKKVVFSPWSVRNVRTYYRFKWE-KVE 74 (284)
Q Consensus 8 ~~~~~v~~~g~~~~~------------~~k~~~y~~~~~ig~~~~~~~~~~~~~~~v~i~v~~~~~~~~~~~~~~~-~~~ 74 (284)
.| ++|+++|.++.. +.+|++|+++++||+|..... ++.+++|++|+..+.+.++++ .++
T Consensus 173 ~p-~~vv~sg~~~~~~~~~~~~~~F~~t~pmstYLva~~vg~f~~~~~-------g~~~~v~~~p~~~~~~~~~~~~~~~ 244 (632)
T 2xq0_A 173 SP-LPVVFSGIRIEDTSKDTNIYRFEQKVPIPAYLIGIASGDLSSAPI-------GPRSTVYTEPFRLKDCQWEFENDVE 244 (632)
T ss_dssp CS-SCEEESSEECCCC----CEEEEEEEEEECGGGCCEEESSCEEEEE-------ETTEEEEECHHHHHHHHHHHTTTHH
T ss_pred Ec-hHHhccCccccceecCCCeEEEEeCCccchhheeeeEecceeecc-------CCeeEEEEccchHHHHHHHHHHHHH
Confidence 46 899988866432 246788999999999988763 345799999999888888898 999
Q ss_pred HHHHHHHHhcCCCCCccCCceeEEEeC-CCCCCccccccccccCCCCcHHHHHHHHHHHHHHHHHhhhccccCcccccch
Q psy5110 75 SCEQNISRTASPLFILPLSMSLVLFLP-PVSMLCSSELYGLADSNRTTAAGLLENFGLVAHELAHQWFGNYATPSWWSYA 153 (284)
Q Consensus 75 ~~l~~~~~~~~~~~~yP~~k~diV~~P-~~~~~~~mE~~gl~~~~~~~~~~~~~~~~~iaHEiAHqWfG~~Vt~~~w~~~ 153 (284)
++++++++++| +||++++|+|++| ++ ..|||||+|++...............+||||+|||||||+||++||+|+
T Consensus 245 ~~l~~~e~~fG---pYP~~k~d~v~~pp~f-~~GgMEn~glt~~~~~ll~~~~~~~~viaHElAHqWfGnlVT~~~W~dl 320 (632)
T 2xq0_A 245 KFIQTAEKIIF---EYEWGTYDILVNVDSY-PYGGMESPNMTFATPTLLAHDRSNIDVIAHELAHSWSGNLVTNCSWNHF 320 (632)
T ss_dssp HHHHHHHHHSC---CCCSSCCCEEECCTTC-CSSEECCTTCEEECGGGCCSSSCSTHHHHHHHHHTTBTTTEEESSGGGT
T ss_pred HHHHHHHHhcc---cCCcccccEEEECCCC-CCCccccceEEEeeceeccCchhHHHHHHHHHHHHHhcCCCccCCcchh
Confidence 99999999996 6999999999996 55 4689999998643222222222356899999999999999999999999
Q ss_pred hhcchHHHHHHHHHHHHhcCcch--hhhHHHHHHHHHHHhhcccC-CCC---cccCCCChhhhhhcccccccccHHHHHH
Q psy5110 154 WLKESVATLFEYYVVSWVEPTWR--MEDLFVVEQVQVAFNSDLKG-SHA---MTSETTTPDSISETFDHIIYNKGQSPAH 227 (284)
Q Consensus 154 WL~Eg~a~y~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~d~~~-~~P---l~~~~~~~~~~~~~~~~~~Y~KG~~vl~ 227 (284)
||+||||+|++.+++++.+|+.. +...+..+.++..+ |+.. .+| +.....++.++...|+.++|.||+++||
T Consensus 321 WLnEGfAtY~e~~~~~~~~g~~~~~~~~~~~~~~l~~~l--~~~~~~~pl~~l~~~~~~~~~~~~~f~~i~Y~KGa~vL~ 398 (632)
T 2xq0_A 321 WLNEGWTVYLERRIIGAIHGEPTRHFSALIGWSDLQNSI--DSMKDPERFSTLVQNLNDNTDPDDAFSTVPYEKGFNLLF 398 (632)
T ss_dssp HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH--HTCSSHHHHTSSSCCCCSSSCGGGGCSSHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH--HhcccCCCCcccccCCCCCCChHHhccchhhHHHHHHHH
Confidence 99999999999999999988753 22222223344444 3333 456 3322222334556899999999999999
Q ss_pred HHHhhCCh-HHHHhhcCCchhhhhhhHHHHhhhcCcccccccccc--------------c-ccCCCCCCC
Q psy5110 228 VEISHCPQ-RVCLESADPPLVICLVTDKLYLRHEWGLVEVKIPIR--------------D-VPQDPCVNP 281 (284)
Q Consensus 228 mL~~~lG~-~~F~~~l~~~l~~~~~~~~y~~~~~~~~~~~~~~~~--------------~-~~~~w~~~~ 281 (284)
||+..||+ ++|+++|| +|+++|++++++.+|+++ . .+++|+.||
T Consensus 399 mL~~~lG~~e~F~~~Lr----------~Yl~~~~~~~~tt~Df~~~l~~~~~~~~~~l~~~~~~~W~~~~ 458 (632)
T 2xq0_A 399 HLETILGGKAEFDPFIR----------HYFKKFAKKSLDTFQFLDTLYEFYPEKKEILDSVDWETWLYKP 458 (632)
T ss_dssp HHHHHTTSHHHHHHHHH----------HHHHHTTTEEECHHHHHHHHHHHCGGGHHHHHTSCHHHHHHCC
T ss_pred HHHHHhCChHHHHHHHH----------HHHHHhCcCCCCHHHHHHHHHHHhhhccccccHHHHHHHhcCC
Confidence 99999999 99999999 999999999988775443 2 467787776
No 10
>3cia_A Cold-active aminopeptidase; psychrohilic, hydrolase; 2.70A {Colwellia psychrerythraea}
Probab=100.00 E-value=1.2e-44 Score=349.76 Aligned_cols=241 Identities=15% Similarity=0.126 Sum_probs=187.7
Q ss_pred CCCCceeeeCCCccC-----------CCceeEEEecccccCceeEEEeecCCCCCcceeEEEecCCccchHhHHHHHHHH
Q psy5110 7 YKPFRIVLCNGEPIQ-----------GNEKVLQSVQIFKIGKWVEISVLGSPDSKKVVFSPWSVRNVRTYYRFKWEKVES 75 (284)
Q Consensus 7 ~~~~~~v~~~g~~~~-----------~~~k~~~y~~~~~ig~~~~~~~~~~~~~~~v~i~v~~~~~~~~~~~~~~~~~~~ 75 (284)
...+++|++||.+.. .+.+|++|++++++|+|..... ++++++|++|+..+.++++++.+++
T Consensus 172 ~p~~~~alsng~~~~~~~~~~~~~f~~t~pmstYl~a~~vg~f~~~~~-------g~~~~v~~~p~~~~~~~~~~~~~~~ 244 (605)
T 3cia_A 172 TDKDLLAVMSANNEPGTERDGDYFFSMPQAIPPYLIAIGVGDLEFKAM-------SHQTGIYAESYILDAAVAEFDDTQA 244 (605)
T ss_dssp CCTTCEEEESSEEC----CCSEEEEEEEEEECGGGCCEEEESCEEEES-------SSSEEEEECSTTHHHHHHHSTTHHH
T ss_pred EcCCcEEEecCCccceecCCCeEEEeeCCCccceeEEEEEeeeeEecC-------CCeEEEEeccChHHHHHHHHHHHHH
Confidence 456899999986542 1246778899999999988762 2457999999999888889999999
Q ss_pred HHHHHHHhcCCCCCccCCceeEEEeCCCCCCccccccccccCCCCcHHHHHHHHHHHHHHHHHhhhccccCcccccchhh
Q psy5110 76 CEQNISRTASPLFILPLSMSLVLFLPPVSMLCSSELYGLADSNRTTAAGLLENFGLVAHELAHQWFGNYATPSWWSYAWL 155 (284)
Q Consensus 76 ~l~~~~~~~~~~~~yP~~k~diV~~P~~~~~~~mE~~gl~~~~~~~~~~~~~~~~~iaHEiAHqWfG~~Vt~~~w~~~WL 155 (284)
+++++++++| +||++++|+|++|+....|||||+|++........+......+||||+|||||||+||++||+++||
T Consensus 245 ~l~~~e~~fG---~YP~~k~d~v~~p~~f~~GgMEn~gltf~~~~ll~~~~~~~~viaHElaHqWfGnlVT~~~W~dlWL 321 (605)
T 3cia_A 245 MIDKAEQMYG---KYRWGRYDLLMLPPSFPFGGMENPRLSFITPTVVAGDKSLVNLIAHELAHSWSGNLVTNESWRDLWL 321 (605)
T ss_dssp HHHHHHHHHC---CCTTSCEEEEECCTTCSSSEECCTTEEEECGGGCCSSSCSTHHHHHHHHHTTBTTTEEESSTTSTHH
T ss_pred HHHHHHHHhC---CCCCccccEEEECCccCCCcccCCcEEEecchhccCcHHHHHHHHHHHHHHhhccccccCcchHhHH
Confidence 9999999997 6999999999996333468999999854322212222235679999999999999999999999999
Q ss_pred cchHHHHHHHHHHHHhcCcch--hhhHHHHHHHHHHHhhccc-C-CCCcccCCCChhhhhhcccccccccHHHHHHHHHh
Q psy5110 156 KESVATLFEYYVVSWVEPTWR--MEDLFVVEQVQVAFNSDLK-G-SHAMTSETTTPDSISETFDHIIYNKGQSPAHVEIS 231 (284)
Q Consensus 156 ~Eg~a~y~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~d~~-~-~~Pl~~~~~~~~~~~~~~~~~~Y~KG~~vl~mL~~ 231 (284)
+||||+|++.+++++.+|+.. +...+..+.++..+ ++. . .+|+..... ..+++..|+.++|.||+++||||+.
T Consensus 322 nEGfAtY~e~~~~~~~~g~~~~~~~~~~~~~~l~~~l--~~~~~~~~pl~~~~~-~~~~~~~f~~i~Y~KGa~vl~mL~~ 398 (605)
T 3cia_A 322 NEGFTSYVENRIMEAVFGTDRAVMEQALGAQDLNAEI--LELDASDTQLYIDLK-GRDPDDAFSGVPYVKGQLFLMYLEE 398 (605)
T ss_dssp HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH--HHSCTTTTSSSCCCT-TCCTTTSCCSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHH--HhhccCCCCcccCCC-CCChhHhhCccchhHHHHHHHHHHH
Confidence 999999999999999988642 22222223344444 223 3 678765432 1334567999999999999999999
Q ss_pred hCChHHHHhhcCCchhhhhhhHHHHhhhcCccccccccc
Q psy5110 232 HCPQRVCLESADPPLVICLVTDKLYLRHEWGLVEVKIPI 270 (284)
Q Consensus 232 ~lG~~~F~~~l~~~l~~~~~~~~y~~~~~~~~~~~~~~~ 270 (284)
.+|+++|+++|| +|+++|++++++.++++
T Consensus 399 ~lG~e~F~~~lr----------~yl~~~~~~~~t~~df~ 427 (605)
T 3cia_A 399 KFGRERFDAFVL----------EYFDSHAFQSLGTDNFV 427 (605)
T ss_dssp HHCHHHHHHHHH----------HHHHHTTTEEECHHHHH
T ss_pred HhChHHHHHHHH----------HHHHHhCcCCCCHHHHH
Confidence 999999999999 99999999998876543
No 11
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=99.88 E-value=2.7e-22 Score=192.51 Aligned_cols=221 Identities=12% Similarity=0.009 Sum_probs=138.7
Q ss_pred cccCceeEEEeecCCCCCcceeEEEecCCccchHhHHHHHHHHHHHHHHHhcCCCCCccCCceeEEEeCCCCCCcccccc
Q psy5110 33 FKIGKWVEISVLGSPDSKKVVFSPWSVRNVRTYYRFKWEKVESCEQNISRTASPLFILPLSMSLVLFLPPVSMLCSSELY 112 (284)
Q Consensus 33 ~~ig~~~~~~~~~~~~~~~v~i~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~yP~~k~diV~~P~~~~~~~mE~~ 112 (284)
+.+|+|....- ...+.++.+.+|.++ . ...+..+..+++++++.+++|| +|||++|++++.+....+||||+.
T Consensus 168 v~~G~~~~~~~--~~~g~p~~l~v~~~~-~-~d~~~~~~~~~~~~~~~~~~fG---~yP~~~Y~fl~~~~~~~~GgmEh~ 240 (597)
T 4fgm_A 168 FLIGDLTIEEF--IAHGIKHSLVLSGRH-Y-ADTSRITADLAKICETQISLFE---EAPFQSYTFLTMVVGNGFGGLEHR 240 (597)
T ss_dssp EEEESCEEEEE--EETTEEEEEEEESSC-C-CCHHHHHHHHHHHHHHHHHHHT---SCSCSEEEEEEEEESSCCEEEECS
T ss_pred hcccCcEEEEe--ccCCeEEEEEEEcCC-C-CCHHHHHHHHHHHHHHHHHHhC---CCCCCceEEEEEccCCCCcccccC
Confidence 45677766553 134455555556652 2 3356778889999999999997 699999999875322246899998
Q ss_pred ccc----cCCC-------CcHHHHHHHHHHHHHHHHHhhhccccCcccc-----------cchhhcchHHHHHHHHHHHH
Q psy5110 113 GLA----DSNR-------TTAAGLLENFGLVAHELAHQWFGNYATPSWW-----------SYAWLKESVATLFEYYVVSW 170 (284)
Q Consensus 113 gl~----~~~~-------~~~~~~~~~~~~iaHEiAHqWfG~~Vt~~~w-----------~~~WL~Eg~a~y~~~~~~~~ 170 (284)
+.. .... ....+......+++||++|||||+.|+++.| ++.||+||||+|++.++..+
T Consensus 241 ~st~l~~~~~~l~~~~~~~~~~~~~~~~~liaHE~~H~W~g~~i~p~~~~~~d~~~~~~~~~lWl~EG~t~Y~~~l~~~r 320 (597)
T 4fgm_A 241 NSTALLCSRKDLISAHQYEMNDNYQTFLSLCCHEYFHSWNIKTLKPKAFLPYQLEKESYTEQLWFYEGMTSYFDDYLLHT 320 (597)
T ss_dssp SEEEEEEEGGGSCCTTCCSCCHHHHHHHHHHHHHHHHTTBTTTBCBGGGSSCCCSSCCCCSTHHHHTHHHHHHHHHHHHH
T ss_pred CceEEEeCchhccccccccchhhhhchhhhHhhhhheeecccccccccccccccccccccccchhhhhHHHHHHHHHHHH
Confidence 632 1110 1234556778999999999999999987654 89999999999999999976
Q ss_pred hcCcc--hhhhHHHHHHHHHHHhhcccCCCCcccC-------CCChhhhhhcccccccccHHHHHHHHHhhCC-----hH
Q psy5110 171 VEPTW--RMEDLFVVEQVQVAFNSDLKGSHAMTSE-------TTTPDSISETFDHIIYNKGQSPAHVEISHCP-----QR 236 (284)
Q Consensus 171 ~~~~~--~~~~~~~~~~~~~~~~~d~~~~~Pl~~~-------~~~~~~~~~~~~~~~Y~KG~~vl~mL~~~lG-----~~ 236 (284)
..... .+.+. +.+.+...........+|+... ...+++-........|.||+++++||...|+ ++
T Consensus 321 ~G~~~~~~~~~~-l~~~i~~~~~~~gr~~~sl~~ss~~aw~~~yr~~~n~~n~~~s~Y~KGalv~~~LD~~lR~~s~g~~ 399 (597)
T 4fgm_A 321 SGIIDEKRYLKL-LGDTLSRVERGAGQYQQSVTESSFLAWTKFYQQNENAPNSIVSYYAKGALIALSLDLMLRLQSDHKL 399 (597)
T ss_dssp TTSSCHHHHHHH-HHHHHHHHHHSGGGGTCCHHHHHHTCCCCCTTCCTTHHHHCCCTTHHHHHHHHHHHHHHHHHTTTSC
T ss_pred cCCCCHHHHHHH-HHHHHHHhhcCCCccccChHHcCchhhhccccCCcccCCcccccchHHHHHHHHHHHHHHhhcCCch
Confidence 54321 11111 1122222221111102333310 0000110112234579999999999876664 45
Q ss_pred HHHhhcCCchhhhhhhHHHHhhhcC--cccccccccc
Q psy5110 237 VCLESADPPLVICLVTDKLYLRHEW--GLVEVKIPIR 271 (284)
Q Consensus 237 ~F~~~l~~~l~~~~~~~~y~~~~~~--~~~~~~~~~~ 271 (284)
.|++.|| .|+++|.. +.++.+++++
T Consensus 400 sldd~mr----------~l~~~~~~~~~~~t~~d~~~ 426 (597)
T 4fgm_A 400 TLARVMK----------ELWHEFGKTSIGTADDTVIN 426 (597)
T ss_dssp CHHHHHH----------HHHHHHTTTTCCBCTTHHHH
T ss_pred HHHHHHH----------HHHHHhCcCCCCCCHHHHHH
Confidence 8999999 88887764 3555555443
No 12
>2y3u_A Collagenase, collagenase G; hydrolase, gluzincin, metalloprotease; HET: P6G FLC; 2.55A {Clostridium histolyticum} PDB: 2y50_A* 2y6i_A*
Probab=85.81 E-value=0.38 Score=47.09 Aligned_cols=39 Identities=26% Similarity=0.468 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHhhhccccCccccc---------chhhcchHHHHHHHH
Q psy5110 128 NFGLVAHELAHQWFGNYATPSWWS---------YAWLKESVATLFEYY 166 (284)
Q Consensus 128 ~~~~iaHEiAHqWfG~~Vt~~~w~---------~~WL~Eg~a~y~~~~ 166 (284)
+..++.||.+|.-=|...-+..|. -.|+.||+|+|++..
T Consensus 422 Lee~f~HEytHyLdgRy~~~G~f~~~~~y~~~~~vW~~EG~AEY~s~~ 469 (785)
T 2y3u_A 422 LEELFRHEYTHYLQARYLVDGLWGQGPFYEKNRLTWFDEGTAEFFAGS 469 (785)
T ss_dssp HHHHHHHHHHHHHHHHHTSCSSTTSSGGGTTTCSHHHHHHHHHHHTTB
T ss_pred ecccccchhhhccccccccccccccCcccccCCCceehhhHHHHHhcC
Confidence 456789999999855444444443 579999999999764
No 13
>2ejq_A Hypothetical protein TTHA0227; NPPSFA, national project on protein structural and functional analyses; 2.08A {Thermus thermophilus} SCOP: d.92.1.17
Probab=77.45 E-value=1.1 Score=33.77 Aligned_cols=28 Identities=21% Similarity=0.120 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHHHHHhhhccccCcccccc
Q psy5110 124 GLLENFGLVAHELAHQWFGNYATPSWWSY 152 (284)
Q Consensus 124 ~~~~~~~~iaHEiAHqWfG~~Vt~~~w~~ 152 (284)
....+..++.||+||. ||.+-+.+.|++
T Consensus 85 L~~~V~~tvvHEiaHh-fe~lag~~glsd 112 (130)
T 2ejq_A 85 WEAEVWETMLHELRHH-LESLAGRDDLVQ 112 (130)
T ss_dssp HHHHHHHHHHHHHHHH-HHHHHTTC----
T ss_pred HHHHHHHHHHHHhHHH-HHhhcccCCCCH
Confidence 3445788999999999 666666665543
No 14
>1u4g_A Elastase, pseudolysin; , inhibition, peptidase family M4, hydrolase; HET: HPI; 1.40A {Pseudomonas aeruginosa} SCOP: d.92.1.2 PDB: 1ezm_A* 3dbk_A*
Probab=76.25 E-value=2.2 Score=36.94 Aligned_cols=97 Identities=10% Similarity=-0.006 Sum_probs=54.8
Q ss_pred HhHHHHHHHHHHHHHHHhcCCCCCccCCceeEEEeCCCCCCccccc--c-c--cc--cC--CCCcHHHHHHHHHHHHHHH
Q psy5110 66 YRFKWEKVESCEQNISRTASPLFILPLSMSLVLFLPPVSMLCSSEL--Y-G--LA--DS--NRTTAAGLLENFGLVAHEL 136 (284)
Q Consensus 66 ~~~~~~~~~~~l~~~~~~~~~~~~yP~~k~diV~~P~~~~~~~mE~--~-g--l~--~~--~~~~~~~~~~~~~~iaHEi 136 (284)
+..+.-.+..+.+++.+.++.. + ++. .++....++. ..+| | | +. +- ...+. ....+++||+
T Consensus 73 ~~DAhy~a~~~~d~y~~~~gr~-~--id~-~l~~~Vhyg~--~y~NAfWdG~~M~fGDG~~~~~p~----~~lDVv~HE~ 142 (301)
T 1u4g_A 73 LNDAHFFGGVVFKLYRDWFGTS-P--LTH-KLYMKVHYGR--SVENAYWDGTAMLFGDGATMFYPL----VSLDVAAHEV 142 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHSSC-S--SSS-CEEEEESCTT--TCCCEEECSSCEEECCCCSSBSCS----CCHHHHHHHH
T ss_pred hHHHHHhHHHHHHHHHHHcCCC-C--CCC-ceEEEEecCC--CccCcEecCcEEEeeCCCcccccc----cccceeeecc
Confidence 3445556678889999999863 2 321 2332222211 1122 1 0 11 00 00011 1257899999
Q ss_pred HHhhhccccCcccccchh-hcchHHHHHHHHHHHHhc
Q psy5110 137 AHQWFGNYATPSWWSYAW-LKESVATLFEYYVVSWVE 172 (284)
Q Consensus 137 AHqWfG~~Vt~~~w~~~W-L~Eg~a~y~~~~~~~~~~ 172 (284)
+|--.-.........+.- |+|||+..+...+-....
T Consensus 143 tHGVt~~~agL~y~~eSGaLnEs~SDifG~~ve~~~~ 179 (301)
T 1u4g_A 143 SHGFTEQNSGLIYRGQSGGMNEAFSDMAGEAAEFYMR 179 (301)
T ss_dssp HHHHHHTTTCCCSSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccceeccccCccccCCccchhHHHHHHHHHHHHHHhc
Confidence 999877765554444444 999999999988754443
No 15
>3cqb_A Probable protease HTPX homolog; heat shock protein HTPX domain, PSI-2, protein structure INI structural genomics; HET: MSE; 1.86A {Vibrio parahaemolyticus rimd 2210633}
Probab=75.03 E-value=1.6 Score=31.48 Aligned_cols=20 Identities=30% Similarity=0.290 Sum_probs=15.1
Q ss_pred HHHHHHHHHHHHHHHhhhcc
Q psy5110 124 GLLENFGLVAHELAHQWFGN 143 (284)
Q Consensus 124 ~~~~~~~~iaHEiAHqWfG~ 143 (284)
....+..++|||++|-=-++
T Consensus 79 ~~~El~aVlaHElgH~~~~h 98 (107)
T 3cqb_A 79 TRDEAEAVLAHEVSHIANGD 98 (107)
T ss_dssp CHHHHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHHHHCCC
Confidence 34568899999999974443
No 16
>2vqx_A Metalloproteinase; thermolysin-like structure, zinc, protease, hydrolase, metalloprotease; 1.82A {Serratia proteamaculans}
Probab=72.73 E-value=2.5 Score=37.17 Aligned_cols=44 Identities=27% Similarity=0.296 Sum_probs=31.8
Q ss_pred HHHHHHHHHHhhhccccCcccccchh-hcchHHHHHHHHHHHHhc
Q psy5110 129 FGLVAHELAHQWFGNYATPSWWSYAW-LKESVATLFEYYVVSWVE 172 (284)
Q Consensus 129 ~~~iaHEiAHqWfG~~Vt~~~w~~~W-L~Eg~a~y~~~~~~~~~~ 172 (284)
..+++||++|--.-.......-.+.- |||||+..+...+-....
T Consensus 157 lDVv~HEltHGVt~~~agL~Y~~eSGaLNEs~SDifG~~ve~~~~ 201 (341)
T 2vqx_A 157 IDVVGHALAHGVTESEAGLIYFQQAGALNESLSDVFGSLVKQFHL 201 (341)
T ss_dssp HHHHHHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhhcccceecccCCccccCCCcchhhHHHHHHHHHHHHHhc
Confidence 46899999998776554443333333 999999999998865443
No 17
>1bqb_A Protein (aureolysin); hydrolase, metalloproteinase; 1.72A {Staphylococcus aureus} SCOP: d.92.1.2
Probab=70.91 E-value=2.6 Score=36.43 Aligned_cols=39 Identities=31% Similarity=0.420 Sum_probs=28.6
Q ss_pred HHHHHHHHHHhhhccccCcccccchh-hcchHHHHHHHHH
Q psy5110 129 FGLVAHELAHQWFGNYATPSWWSYAW-LKESVATLFEYYV 167 (284)
Q Consensus 129 ~~~iaHEiAHqWfG~~Vt~~~w~~~W-L~Eg~a~y~~~~~ 167 (284)
..+++||+.|--.-.......-.+.- |||||+..+..++
T Consensus 139 lDVv~HE~tHGVt~~~agl~y~~eSGaLnEs~SDifg~~~ 178 (301)
T 1bqb_A 139 NDVVAHEITHGVTQQTANLEYKDQSGALNESFSDVFGYFV 178 (301)
T ss_dssp HHHHHHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHH
T ss_pred cceeeeecccceecccCCCcccCCcCchhHHHHHHHhHhh
Confidence 46899999998766655443333333 8999999999764
No 18
>3dnz_A Thermolysin; hydrolase, metalloproteinase, calcium, metal-binding, metalloprotease, protease, secreted, zinc, zymogen; HET: LYS; 1.20A {Bacillus thermoproteolyticus} PDB: 1kjo_A* 1kjp_A* 1kkk_A* 1kl6_A* 1kr6_A* 1kro_A* 1ks7_A* 1kto_A* 1y3g_E* 2whz_A* 2wi0_A* 1kei_A* 3do0_A* 3do1_A* 3do2_A* 3fb0_A 3fbo_A 3fgd_A* 3flf_A* 3fv4_A* ...
Probab=67.05 E-value=3.5 Score=35.83 Aligned_cols=102 Identities=14% Similarity=-0.011 Sum_probs=53.7
Q ss_pred hHhHHHHHHHHHHHHHHHhcCCCCCccCC--ceeEEEeCCCCCCcccccc----ccccCCC---CcHHHHHHHHHHHHHH
Q psy5110 65 YYRFKWEKVESCEQNISRTASPLFILPLS--MSLVLFLPPVSMLCSSELY----GLADSNR---TTAAGLLENFGLVAHE 135 (284)
Q Consensus 65 ~~~~~~~~~~~~l~~~~~~~~~~~~yP~~--k~diV~~P~~~~~~~mE~~----gl~~~~~---~~~~~~~~~~~~iaHE 135 (284)
.+..+...+..+.+|+.+.++.. +++ -..++..-.++. ..+|- ..+.... ...........+++||
T Consensus 69 aavdA~~~~~~t~d~y~~~~gr~---sid~~G~~l~~~VHyg~--~y~NAfW~g~~m~fGDGdg~~f~~~~~slDVv~HE 143 (316)
T 3dnz_A 69 PAVDAHYYAGVTYDYYKNVHNRL---SYDGNNAAIRSSVHYSQ--GYNNAFWNGSQMVYGDGDGQTFIPLSGGIDVVAHE 143 (316)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCC---TTTSSCCCEEEEESCTT--TCCCEEECSSCEEECCCCSSSBSCGGGCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCCC---CCCCCCceEEEEEecCC--CccCceEcCCEEEEeCCCCcccccccccccceeee
Confidence 34667778888999999999863 222 122221111110 11111 0111000 0000011124689999
Q ss_pred HHHhhhccccCcccccch-hhcchHHHHHHHHHHHHh
Q psy5110 136 LAHQWFGNYATPSWWSYA-WLKESVATLFEYYVVSWV 171 (284)
Q Consensus 136 iAHqWfG~~Vt~~~w~~~-WL~Eg~a~y~~~~~~~~~ 171 (284)
+.|--.-......--.+. =|||+|+..+..++-...
T Consensus 144 ~tHgvt~~~agL~y~~esGaLNEs~SDifG~~ve~~~ 180 (316)
T 3dnz_A 144 LTHAVTDYTAGLIYQNESGAINEAISDIFGTLVEFYA 180 (316)
T ss_dssp HHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eccccccccCCCcccCCccchhHHHHHHHHHHHHHHh
Confidence 999876655443322232 399999999998876444
No 19
>4ger_A Gentlyase metalloprotease; metalloproteinase, tissue disaggregation, thermoly protease, hydrolase; HET: LYS; 1.59A {Paenibacillus polymyxa}
Probab=65.62 E-value=4.4 Score=35.01 Aligned_cols=40 Identities=18% Similarity=0.208 Sum_probs=28.5
Q ss_pred HHHHHHHHHHhhhccccCcccccc-hhhcchHHHHHHHHHH
Q psy5110 129 FGLVAHELAHQWFGNYATPSWWSY-AWLKESVATLFEYYVV 168 (284)
Q Consensus 129 ~~~iaHEiAHqWfG~~Vt~~~w~~-~WL~Eg~a~y~~~~~~ 168 (284)
..+++|||.|--.-......--.+ ==|||+|+..+..++-
T Consensus 130 lDVvaHEltHGVt~~ta~L~Y~~qsGaLNEs~SDifG~~ve 170 (304)
T 4ger_A 130 PDVVGHELTHGVTEYTSNLEYYGESGALNEAFSDVIGNDIQ 170 (304)
T ss_dssp HHHHHHHHHHHHHHTTTCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred cchhhhccccccccccCCccccCCccchhHHHHHHHHHHhc
Confidence 468999999986655433322222 2389999999999886
No 20
>3c37_A Peptidase, M48 family; Q74D82, GSR143A, structural genomics, protein structure initiative, northeast structural genomics consortium; 1.70A {Geobacter sulfurreducens pca}
Probab=53.25 E-value=6.7 Score=32.77 Aligned_cols=20 Identities=30% Similarity=0.268 Sum_probs=15.6
Q ss_pred HHHHHHHHHHHHHHhhhccc
Q psy5110 125 LLENFGLVAHELAHQWFGNY 144 (284)
Q Consensus 125 ~~~~~~~iaHEiAHqWfG~~ 144 (284)
...+..+||||++|-=-++.
T Consensus 97 ~~ELaaVLaHElgH~~~~H~ 116 (253)
T 3c37_A 97 ETELAGVLAHEINHAVARHG 116 (253)
T ss_dssp HHHHHHHHHHHHHHHHTTHH
T ss_pred HHHHHHHHHHHHHHHHCcCH
Confidence 45788999999999855443
No 21
>2ddf_A ADAM 17; hydrolase; HET: INN CIT; 1.70A {Homo sapiens} PDB: 2fv5_A* 3l0v_A* 3kme_A* 3l0t_A* 3kmc_A* 3le9_A* 3lea_A* 3lgp_A* 3o64_A* 3ewj_A* 3edz_A* 3e8r_A* 2fv9_A* 1zxc_A* 2oi0_A* 3b92_A* 2a8h_A* 1bkc_A* 3cki_A 1bkc_I* ...
Probab=49.53 E-value=8.2 Score=32.17 Aligned_cols=14 Identities=43% Similarity=0.657 Sum_probs=11.7
Q ss_pred HHHHHHHHHHHhhhc
Q psy5110 128 NFGLVAHELAHQWFG 142 (284)
Q Consensus 128 ~~~~iaHEiAHqWfG 142 (284)
...++||||+|+ ||
T Consensus 182 ~a~~~AHElGHn-lG 195 (257)
T 2ddf_A 182 ADLVTTHELGHN-FG 195 (257)
T ss_dssp HHHHHHHHHHHH-TT
T ss_pred eeeeeeeehhhh-cC
Confidence 567899999999 45
No 22
>1bud_A Protein (acutolysin A); metalloproteinase, snake venom, MMP, toxin; 1.90A {Deinagkistrodon acutus} SCOP: d.92.1.9 PDB: 1bsw_A
Probab=49.00 E-value=7.7 Score=30.96 Aligned_cols=15 Identities=40% Similarity=0.472 Sum_probs=12.2
Q ss_pred HHHHHHHHHHHHhhhc
Q psy5110 127 ENFGLVAHELAHQWFG 142 (284)
Q Consensus 127 ~~~~~iaHEiAHqWfG 142 (284)
....++||||+|+ ||
T Consensus 132 ~~a~~~AHElGH~-lG 146 (197)
T 1bud_A 132 LVAITLAHEMAHN-LG 146 (197)
T ss_dssp HHHHHHHHHHHHH-TT
T ss_pred HHHHHHHHHHhhh-cC
Confidence 3578999999999 44
No 23
>1atl_A Atrolysin C; metalloendopeptidase, hydrolase-hydrolase inhibitor complex; HET: 0QI; 1.80A {Crotalus atrox} SCOP: d.92.1.9 PDB: 1htd_A 1dth_A* 3aig_A* 2aig_P* 4aig_A* 1iag_A
Probab=48.81 E-value=7.8 Score=31.10 Aligned_cols=14 Identities=43% Similarity=0.510 Sum_probs=11.9
Q ss_pred HHHHHHHHHHHhhhc
Q psy5110 128 NFGLVAHELAHQWFG 142 (284)
Q Consensus 128 ~~~~iaHEiAHqWfG 142 (284)
...++||||+|+ ||
T Consensus 136 ~a~~~AHElGHn-lG 149 (202)
T 1atl_A 136 MGVTMAHELGHN-LG 149 (202)
T ss_dssp HHHHHHHHHHHH-TT
T ss_pred eEEEehhhhccc-cC
Confidence 568999999999 45
No 24
>1qua_A Acutolysin-C, hemorrhagin III; metalloprotease, hemorrhagic toxin, snake venom proteinase; 2.20A {Deinagkistrodon acutus} SCOP: d.92.1.9
Probab=47.81 E-value=8.2 Score=30.78 Aligned_cols=14 Identities=43% Similarity=0.579 Sum_probs=11.8
Q ss_pred HHHHHHHHHHHhhhc
Q psy5110 128 NFGLVAHELAHQWFG 142 (284)
Q Consensus 128 ~~~~iaHEiAHqWfG 142 (284)
...++||||+|+ ||
T Consensus 135 ~a~~~AHElGH~-lG 148 (197)
T 1qua_A 135 MAVTMAHELGHN-LG 148 (197)
T ss_dssp HHHHHHHHHHHH-TT
T ss_pred HHHHHHHHHHHh-cC
Confidence 578999999999 44
No 25
>3nqx_A MCP-02, secreted metalloprotease MCP02; zinc metalloprotease, alpha/beta protein, hydrolase; 1.70A {Pseudoalteromonas SP} PDB: 3nqy_B 3nqz_B
Probab=47.21 E-value=14 Score=31.90 Aligned_cols=43 Identities=14% Similarity=0.151 Sum_probs=29.5
Q ss_pred HHHHHHHHHHhhhccccCcccc-cchhhcchHHHHHHHHHHHHh
Q psy5110 129 FGLVAHELAHQWFGNYATPSWW-SYAWLKESVATLFEYYVVSWV 171 (284)
Q Consensus 129 ~~~iaHEiAHqWfG~~Vt~~~w-~~~WL~Eg~a~y~~~~~~~~~ 171 (284)
..+++||+.|----..-....- +.-=|+|||+..+...+....
T Consensus 136 lDVv~HE~tHGvt~~~a~l~y~~esGaLnEs~SDifg~~ve~~~ 179 (306)
T 3nqx_A 136 LDVSAHEVSHGFTEQNSGLIYNGKPGGLNEAFSDMAGEAAEFYM 179 (306)
T ss_dssp HHHHHHHHHHHHHHTTTCCCSSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchhhhhhccccccCCCCCccCCCCCcccchHHHHHHHHHHHHh
Confidence 5689999999876544332221 223499999999998875443
No 26
>2w15_A Zinc metalloproteinase BAP1; hydrolase inhibitor complex, metal-binding, zinc-depending, metalloprotease, metalloproteinase/inhibitor complex; HET: WR2; 1.05A {Bothrops asper} PDB: 2w12_A* 2w13_A* 2w14_A* 1nd1_A 3gbo_A
Probab=46.53 E-value=8.8 Score=30.73 Aligned_cols=15 Identities=40% Similarity=0.446 Sum_probs=12.3
Q ss_pred HHHHHHHHHHHHhhhc
Q psy5110 127 ENFGLVAHELAHQWFG 142 (284)
Q Consensus 127 ~~~~~iaHEiAHqWfG 142 (284)
....++||||+|+ ||
T Consensus 135 ~~a~~~AHElGH~-lG 149 (202)
T 2w15_A 135 WVAVTMAHELGHN-LG 149 (202)
T ss_dssp HHHHHHHHHHHHH-TT
T ss_pred HHHHHHHHHHhhh-cC
Confidence 3578999999999 44
No 27
>1kuf_A Atrolysin E, metalloproteinase; alpha/beta protein, hydrolase; 1.35A {Protobothrops mucrosquamatus} SCOP: d.92.1.9 PDB: 1kui_A 1kuk_A 1kug_A 1wni_A
Probab=45.36 E-value=9.5 Score=30.62 Aligned_cols=15 Identities=33% Similarity=0.457 Sum_probs=12.4
Q ss_pred HHHHHHHHHHHHhhhc
Q psy5110 127 ENFGLVAHELAHQWFG 142 (284)
Q Consensus 127 ~~~~~iaHEiAHqWfG 142 (284)
....++||||+|+ ||
T Consensus 137 ~~a~~~AHElGH~-lG 151 (203)
T 1kuf_A 137 MVAVTMTHELGHN-LG 151 (203)
T ss_dssp HHHHHHHHHHHHH-TT
T ss_pred hhHHHHHHHhhhh-cC
Confidence 3678999999999 45
No 28
>1yp1_A FII; FII hydrolase; 1.90A {Deinagkistrodon acutus}
Probab=45.03 E-value=9.6 Score=30.52 Aligned_cols=14 Identities=43% Similarity=0.653 Sum_probs=12.0
Q ss_pred HHHHHHHHHHHhhhc
Q psy5110 128 NFGLVAHELAHQWFG 142 (284)
Q Consensus 128 ~~~~iaHEiAHqWfG 142 (284)
...++||||+|+ ||
T Consensus 135 ~a~~~AHElGH~-lG 148 (202)
T 1yp1_A 135 MAVVMAHELGHN-LG 148 (202)
T ss_dssp HHHHHHHHHHHH-TT
T ss_pred HHHHHHHHHHHh-cC
Confidence 578999999999 45
No 29
>3b8z_A Protein adamts-5; alpha/beta, hydrolase; HET: 294; 1.40A {Homo sapiens} PDB: 3hyg_A* 3hy9_A* 3hy7_A* 3ljt_A*
Probab=44.95 E-value=9.6 Score=30.87 Aligned_cols=14 Identities=43% Similarity=0.539 Sum_probs=11.6
Q ss_pred HHHHHHHHHHHhhhc
Q psy5110 128 NFGLVAHELAHQWFG 142 (284)
Q Consensus 128 ~~~~iaHEiAHqWfG 142 (284)
...++||||+|+ ||
T Consensus 141 ~a~~~AHElGHn-lG 154 (217)
T 3b8z_A 141 AAFTVAHEIGHL-LG 154 (217)
T ss_dssp HHHHHHHHHHHH-TT
T ss_pred hhhhhHhhhhhh-cC
Confidence 467999999999 44
No 30
>3k7l_A Atragin; SVMP, metalloprotease, hydrolase; HET: NAG; 2.50A {Naja atra}
Probab=44.08 E-value=55 Score=29.46 Aligned_cols=15 Identities=33% Similarity=0.443 Sum_probs=12.4
Q ss_pred HHHHHHHHHHHHhhhc
Q psy5110 127 ENFGLVAHELAHQWFG 142 (284)
Q Consensus 127 ~~~~~iaHEiAHqWfG 142 (284)
....++||||+|. ||
T Consensus 143 ~~a~t~AHElGHn-lG 157 (422)
T 3k7l_A 143 MVAITMAHEMGHN-LG 157 (422)
T ss_dssp HHHHHHHHHHHHH-TT
T ss_pred hhhHHHHHHHHHH-cC
Confidence 4678899999999 45
No 31
>3k7n_A K-like; SVMP, hydrolase; HET: NAG FUC FUL; 2.30A {Naja atra}
Probab=43.72 E-value=44 Score=29.83 Aligned_cols=15 Identities=33% Similarity=0.554 Sum_probs=12.2
Q ss_pred HHHHHHHHHHHHhhhc
Q psy5110 127 ENFGLVAHELAHQWFG 142 (284)
Q Consensus 127 ~~~~~iaHEiAHqWfG 142 (284)
....++||||+|. ||
T Consensus 138 ~~a~t~AHElGHn-lG 152 (397)
T 3k7n_A 138 LVASTITHELGHN-LG 152 (397)
T ss_dssp HHHHHHHHHHHHH-TT
T ss_pred hhhhhHHHHHHHH-cC
Confidence 4578899999998 45
No 32
>2v4b_A Adamts-1; zymogen, protease, hydrolase, metalloprotease, heparin-binding, metalloproteinase, metzincin, glycoprotein metal-binding; 2.00A {Homo sapiens} PDB: 2jih_A 3q2g_A* 3q2h_A*
Probab=41.79 E-value=11 Score=32.19 Aligned_cols=14 Identities=43% Similarity=0.460 Sum_probs=11.9
Q ss_pred HHHHHHHHHHHhhhc
Q psy5110 128 NFGLVAHELAHQWFG 142 (284)
Q Consensus 128 ~~~~iaHEiAHqWfG 142 (284)
...++||||+|. ||
T Consensus 143 ~a~t~AHElGHn-lG 156 (300)
T 2v4b_A 143 AAFTTAHELGHV-FN 156 (300)
T ss_dssp HHHHHHHHHHHH-TT
T ss_pred ceehhhhhhhhh-cC
Confidence 578999999999 45
No 33
>2i47_A ADAM 17; TACE-inhibitor complex, hydrolase; HET: INN KGY; 1.90A {Homo sapiens} SCOP: d.92.1.10 PDB: 3g42_A*
Probab=41.38 E-value=11 Score=31.90 Aligned_cols=15 Identities=40% Similarity=0.607 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHhhhcc
Q psy5110 128 NFGLVAHELAHQWFGN 143 (284)
Q Consensus 128 ~~~~iaHEiAHqWfG~ 143 (284)
...++||||+|+ ||.
T Consensus 188 ~a~~~AHElGHn-lGm 202 (288)
T 2i47_A 188 ADLVTTHELGHN-FGA 202 (288)
T ss_dssp HHHHHHHHHHHH-TTC
T ss_pred HHHHHHHHHHhh-cCC
Confidence 567999999999 453
No 34
>1r55_A ADAM 33; metalloprotease, inhibitor, asthma, hydrolase; HET: NAG MAN 097; 1.58A {Homo sapiens} SCOP: d.92.1.9 PDB: 1r54_A*
Probab=40.41 E-value=12 Score=30.17 Aligned_cols=15 Identities=33% Similarity=0.612 Sum_probs=12.2
Q ss_pred HHHHHHHHHHHHhhhc
Q psy5110 127 ENFGLVAHELAHQWFG 142 (284)
Q Consensus 127 ~~~~~iaHEiAHqWfG 142 (284)
....++||||+|+ ||
T Consensus 135 ~~a~~~AHElGHn-lG 149 (214)
T 1r55_A 135 GAAATMAHEIGHS-LG 149 (214)
T ss_dssp HHHHHHHHHHHHH-TT
T ss_pred HHHHHHHHHHHHh-cC
Confidence 3578999999999 44
No 35
>2rjp_A Adamts-4; metalloprotease domain, aggrecanase, cleavage on PAIR of basic residues, extracellular matrix, glycoprotein, hydrolase, metal-binding; HET: 886; 2.80A {Homo sapiens} PDB: 3b2z_A
Probab=40.22 E-value=12 Score=32.24 Aligned_cols=15 Identities=33% Similarity=0.454 Sum_probs=12.2
Q ss_pred HHHHHHHHHHHHhhhc
Q psy5110 127 ENFGLVAHELAHQWFG 142 (284)
Q Consensus 127 ~~~~~iaHEiAHqWfG 142 (284)
....++||||+|. ||
T Consensus 142 ~~a~t~AHElGHn-lG 156 (316)
T 2rjp_A 142 QSAFTAAHQLGHV-FN 156 (316)
T ss_dssp THHHHHHHHHHHH-TT
T ss_pred hHHHHHHHHHHhh-cC
Confidence 4578999999999 44
No 36
>2ero_A VAP-1, vascular apoptosis-inducing protein 1; metalloprotease, disintegrin, calcium-binding, ADAM, SVMP, M protein, toxin; HET: NAG; 2.50A {Crotalus atrox} PDB: 2erp_A* 2erq_A*
Probab=40.03 E-value=12 Score=33.89 Aligned_cols=14 Identities=29% Similarity=0.237 Sum_probs=11.9
Q ss_pred HHHHHHHHHHHHhh
Q psy5110 127 ENFGLVAHELAHQW 140 (284)
Q Consensus 127 ~~~~~iaHEiAHqW 140 (284)
....++||||+|++
T Consensus 145 ~~a~t~AHElGHnl 158 (427)
T 2ero_A 145 LVAIAMAHEMGHNL 158 (427)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhc
Confidence 45789999999994
No 37
>3g5c_A ADAM 22; alpha/beta fold, cross-linked domain, cell adhesion, cleavag of basic residues, EGF-like domain, glycoprotein, membrane, phosphoprotein; HET: NAG; 2.36A {Homo sapiens}
Probab=37.85 E-value=49 Score=30.66 Aligned_cols=15 Identities=33% Similarity=0.322 Sum_probs=12.3
Q ss_pred HHHHHHHHHHHHhhhc
Q psy5110 127 ENFGLVAHELAHQWFG 142 (284)
Q Consensus 127 ~~~~~iaHEiAHqWfG 142 (284)
....++||||+|. ||
T Consensus 133 ~~A~t~AHELGHn-LG 147 (510)
T 3g5c_A 133 LMAVTLAQSLAHN-IG 147 (510)
T ss_dssp HHHHHHHHHHHHH-HT
T ss_pred hhhHHHHHHHHHH-cC
Confidence 4678999999998 44
No 38
>2rjq_A Adamts-5; metalloprotease domain, aggrecanase, cleavage on PAIR of BAS residues, extracellular matrix, glycoprotein, hydrolase, ME binding; HET: NAG BAT; 2.60A {Homo sapiens}
Probab=37.60 E-value=14 Score=32.74 Aligned_cols=13 Identities=38% Similarity=0.342 Sum_probs=11.2
Q ss_pred HHHHHHHHHHHhh
Q psy5110 128 NFGLVAHELAHQW 140 (284)
Q Consensus 128 ~~~~iaHEiAHqW 140 (284)
...++||||+|..
T Consensus 143 ~a~~~AHElGHnl 155 (378)
T 2rjq_A 143 AAFTVAHEIGHLL 155 (378)
T ss_dssp HHHHHHHHHHHHT
T ss_pred hhhhhhhhhhhhc
Confidence 5689999999993
No 39
>2e3x_A Coagulation factor X-activating enzyme light CHAI; disintegrin, metalloproteinase, C-type lectin, hydrolase, BL clotting, toxin; HET: NAG MAN GM6; 2.91A {Daboia russellii siamensis}
Probab=36.16 E-value=14 Score=33.41 Aligned_cols=14 Identities=36% Similarity=0.563 Sum_probs=11.7
Q ss_pred HHHHHHHHHHHHhh
Q psy5110 127 ENFGLVAHELAHQW 140 (284)
Q Consensus 127 ~~~~~iaHEiAHqW 140 (284)
....++||||+|++
T Consensus 138 ~~a~t~AHElGHnl 151 (427)
T 2e3x_A 138 KTAVIMAHELSHNL 151 (427)
T ss_dssp HHHHHHHHHHHHTT
T ss_pred eeeeehHHHHHHhh
Confidence 45689999999993
No 40
>2dw0_A Catrocollastatin; apoptotic toxin, SVMP, metalloproteinase, apoptosis, toxin; HET: NAG BMA MAN GM6; 2.15A {Crotalus atrox} PDB: 2dw1_A* 2dw2_A* 3dsl_A* 3hdb_A*
Probab=34.86 E-value=16 Score=32.93 Aligned_cols=14 Identities=29% Similarity=0.382 Sum_probs=11.8
Q ss_pred HHHHHHHHHHHHhh
Q psy5110 127 ENFGLVAHELAHQW 140 (284)
Q Consensus 127 ~~~~~iaHEiAHqW 140 (284)
....++||||+|++
T Consensus 136 ~~a~t~AHElGHnl 149 (419)
T 2dw0_A 136 VVAVIMAHEMGHNL 149 (419)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred hhhhhHHHHHHHHc
Confidence 45789999999994
No 41
>3e11_A Predicted zincin-like metalloprotease; DUF1025 family protein, zincin-like fold, conserved matrix metalloprotease motif; 1.80A {Acidothermus cellulolyticus 11B} SCOP: d.92.1.17
Probab=33.11 E-value=26 Score=25.44 Aligned_cols=16 Identities=38% Similarity=0.495 Sum_probs=12.8
Q ss_pred HHHHHHHHHHHHHHhh
Q psy5110 125 LLENFGLVAHELAHQW 140 (284)
Q Consensus 125 ~~~~~~~iaHEiAHqW 140 (284)
...+..++.||+||..
T Consensus 87 ~~~V~~vvvhEiahh~ 102 (114)
T 3e11_A 87 IDEVRKTVVHEIAHHF 102 (114)
T ss_dssp HHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHc
Confidence 3457789999999983
No 42
>4aw6_A CAAX prenyl protease 1 homolog; hydrolase, M48 peptidase, integral membrane protein, prelami processing, ageing, progeria; HET: PC1; 3.40A {Homo sapiens} PDB: 2ypt_A
Probab=31.90 E-value=20 Score=33.02 Aligned_cols=21 Identities=29% Similarity=0.384 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHHHHhhhcccc
Q psy5110 125 LLENFGLVAHELAHQWFGNYA 145 (284)
Q Consensus 125 ~~~~~~~iaHEiAHqWfG~~V 145 (284)
.+.+..++|||++|-=-++.+
T Consensus 326 ~~El~aVlaHElgH~~~~~~~ 346 (482)
T 4aw6_A 326 NEEVLAVLGHELGHWKLGHTV 346 (482)
T ss_dssp HHHHHHHHHHHHHHHHTTHHH
T ss_pred HHHHHHHHHHHHHHHHcccHH
Confidence 467889999999998655543
No 43
>4dd8_A Disintegrin and metalloproteinase domain-containi 8; batimastat, inflammation, alpha/beta motif, metalloproteinas allergic asthma, tumorigenesis; HET: BAT; 2.10A {Homo sapiens}
Probab=30.19 E-value=23 Score=28.39 Aligned_cols=14 Identities=36% Similarity=0.582 Sum_probs=11.5
Q ss_pred HHHHHHHHHHHhhhc
Q psy5110 128 NFGLVAHELAHQWFG 142 (284)
Q Consensus 128 ~~~~iaHEiAHqWfG 142 (284)
...++|||++|. ||
T Consensus 133 ~a~~~AHElGH~-lG 146 (208)
T 4dd8_A 133 VACTMAHEMGHN-LG 146 (208)
T ss_dssp HHHHHHHHHHHH-TT
T ss_pred HHHHHHHHHHHH-cC
Confidence 467899999998 45
No 44
>4gow_A Potassium voltage-gated channel subfamily KQT MEM; protein complex, protein binding, ION channel, calmodulin, P channel; 2.60A {Homo sapiens}
Probab=23.85 E-value=17 Score=23.63 Aligned_cols=47 Identities=13% Similarity=-0.005 Sum_probs=13.9
Q ss_pred HHHHHHHHHhhCChHHHHhhcCCchhhhhhhHHHHhhhcCcccccccccccc
Q psy5110 222 GQSPAHVEISHCPQRVCLESADPPLVICLVTDKLYLRHEWGLVEVKIPIRDV 273 (284)
Q Consensus 222 G~~vl~mL~~~lG~~~F~~~l~~~l~~~~~~~~y~~~~~~~~~~~~~~~~~~ 273 (284)
..-.++.++..+-..+|+++||.|+.-.- ..+++-|+++.-..||.+
T Consensus 12 ~irair~mkf~VarrkFkealrPYDVkDV-----IEQYSaGHldml~RiK~L 58 (72)
T 4gow_A 12 VIRSIRILKFLVAKRKFKETLRPYDVKDV-----IEQYSAGHLDMLGRIKSL 58 (72)
T ss_dssp HHHHHHHHHHHHHHHHC-----------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHhcCcccHHHH-----HHHHhhhHHHHHHHHHHH
Confidence 34567888899999999999999954332 334555666655555543
No 45
>2jsd_A Matrix metalloproteinase-20; MMP-NNGH, structural genomics, structural proteomics in europe, spine, spine-2, spine2-complexes, hydrolase; HET: NGH; NMR {Homo sapiens}
Probab=23.84 E-value=35 Score=25.94 Aligned_cols=13 Identities=38% Similarity=0.667 Sum_probs=10.8
Q ss_pred HHHHHHHHHHHHh
Q psy5110 127 ENFGLVAHELAHQ 139 (284)
Q Consensus 127 ~~~~~iaHEiAHq 139 (284)
....+++|||.|-
T Consensus 107 ~~~~v~~HEiGHa 119 (160)
T 2jsd_A 107 NLFTVAAHEFGHA 119 (160)
T ss_dssp EHHHHHHHHHHHH
T ss_pred hhHHHHHHHhHhh
Confidence 3578999999997
No 46
>2ovx_A Matrix metalloproteinase-9 (EC 3.4.24.35) (MMP-9) type IV collagenase) (92 kDa gelatinase)...; S1-prime pocket, hydrolase-hydrola inhibitor complex; HET: 4MR; 2.00A {Homo sapiens} SCOP: d.92.1.11 PDB: 2ovz_A* 2ow0_A* 2ow1_A* 2ow2_A* 1gkd_A* 1gkc_A*
Probab=22.62 E-value=38 Score=25.86 Aligned_cols=13 Identities=31% Similarity=0.516 Sum_probs=10.6
Q ss_pred HHHHHHHHHHHHh
Q psy5110 127 ENFGLVAHELAHQ 139 (284)
Q Consensus 127 ~~~~~iaHEiAHq 139 (284)
.+..+++|||.|-
T Consensus 110 ~~~~va~HEiGHa 122 (159)
T 2ovx_A 110 SLFLVAAHQFGHA 122 (159)
T ss_dssp EHHHHHHHHHHHH
T ss_pred chhhhhhhhhhhh
Confidence 3568999999886
No 47
>3dte_A IRRE protein; radiotolerance, gene regulation, metallopeptidase; 2.60A {Deinococcus deserti} PDB: 3dti_A 3dtk_A
Probab=22.46 E-value=47 Score=28.48 Aligned_cols=20 Identities=20% Similarity=0.107 Sum_probs=16.0
Q ss_pred HHHHHHHHHHHHHhhhcccc
Q psy5110 126 LENFGLVAHELAHQWFGNYA 145 (284)
Q Consensus 126 ~~~~~~iaHEiAHqWfG~~V 145 (284)
.....++|||++|-+.+...
T Consensus 94 ~rqrFTLAHELGHllLh~~~ 113 (301)
T 3dte_A 94 ERQRFTLAHEISHALLLGDD 113 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHCH
T ss_pred hhHHHHHHHHHHHHHhcccc
Confidence 45578999999999998643
No 48
>2xs4_A Karilysin protease; hydrolase, bacterial MMP, virulence factor, metalloprotease, dependent, peptidase; 1.70A {Tannerella forsythia} PDB: 2xs3_A
Probab=21.68 E-value=40 Score=25.84 Aligned_cols=13 Identities=31% Similarity=0.544 Sum_probs=10.9
Q ss_pred HHHHHHHHHHHHh
Q psy5110 127 ENFGLVAHELAHQ 139 (284)
Q Consensus 127 ~~~~~iaHEiAHq 139 (284)
.+..+++|||.|-
T Consensus 114 ~~~~v~~HEiGHa 126 (167)
T 2xs4_A 114 DLITVAAHEIGHL 126 (167)
T ss_dssp EHHHHHHHHHHHH
T ss_pred chhhhHHHHHHHh
Confidence 4568999999987
No 49
>1hy7_A Stromelysin-1, MMP-3; mixed alpha beta structure, zinc protease, inhibited, hydrol; HET: MBS; 1.50A {Homo sapiens} SCOP: d.92.1.11 PDB: 1biw_A* 1bm6_A* 1bqo_A* 1b3d_A* 1cqr_A 1d5j_A* 1d7x_A* 1d8f_A* 1d8m_A* 1g05_A* 1g49_A* 1c3i_A* 1sln_A* 1uea_A 2srt_A* 1ums_A* 1umt_A* 2d1o_A* 3oho_A* 1ciz_A* ...
Probab=21.37 E-value=41 Score=26.01 Aligned_cols=13 Identities=38% Similarity=0.613 Sum_probs=10.8
Q ss_pred HHHHHHHHHHHHh
Q psy5110 127 ENFGLVAHELAHQ 139 (284)
Q Consensus 127 ~~~~~iaHEiAHq 139 (284)
.+..+++|||.|-
T Consensus 112 ~~~~v~~HEiGHa 124 (173)
T 1hy7_A 112 NLFLVAAHEIGHS 124 (173)
T ss_dssp EHHHHHHHHHHHH
T ss_pred hhhhhHHHHHHHh
Confidence 3568999999997
No 50
>1cge_A Fibroblast collagenase; hydrolase (metalloprotease); 1.90A {Homo sapiens} SCOP: d.92.1.11 PDB: 2j0t_A 1ayk_A 1hfc_A* 2ayk_A 2tcl_A* 3ayk_A* 4ayk_A* 1cgl_A* 1cgf_A 966c_A* 3shi_A
Probab=21.25 E-value=42 Score=25.86 Aligned_cols=12 Identities=42% Similarity=0.570 Sum_probs=10.4
Q ss_pred HHHHHHHHHHHh
Q psy5110 128 NFGLVAHELAHQ 139 (284)
Q Consensus 128 ~~~~iaHEiAHq 139 (284)
+..+++|||.|-
T Consensus 111 ~~~v~~HEiGHa 122 (168)
T 1cge_A 111 LHRVAAHELGHS 122 (168)
T ss_dssp HHHHHHHHHHHH
T ss_pred hhhhhhhHhHhh
Confidence 578999999987
Done!