BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5111
(132 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4H5H|A Chain A, Crystal Structure Of Porcine Aminopeptidase-N Complexed
With Cleaved Poly-Alanine
pdb|4HOM|A Chain A, Crystal Structure Of Porcine Aminopeptidase-N Complexed
With Substance P
Length = 908
Score = 63.2 bits (152), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 35/59 (59%)
Query: 72 REKFLLTSKHQCTTADFQRATSVVTHEFTHQWFGDLVTPASWNFAWLNEAFARLFEYFG 130
RE LL + ++ +R +V+ HE HQWFG+LVT A WN WLNE FA EY G
Sbjct: 296 RENALLFDPQSSSISNKERVVTVIAHELAHQWFGNLVTLAWWNDLWLNEGFASYVEYLG 354
Score = 60.1 bits (144), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 34/58 (58%)
Query: 1 EKFLLTSKGQCTTADFQRATSVVTHEFTHQWFGDLVTPASWNFAWLNEAFARLFEYFG 58
E LL + ++ +R +V+ HE HQWFG+LVT A WN WLNE FA EY G
Sbjct: 297 ENALLFDPQSSSISNKERVVTVIAHELAHQWFGNLVTLAWWNDLWLNEGFASYVEYLG 354
>pdb|4FKE|A Chain A, Crystal Structure Of Porcine Aminopeptidase-N
pdb|4FKH|A Chain A, Crystal Structure Of Porcine Aminopeptidase-N Complexed
With Alanine
pdb|4FKK|A Chain A, Crystal Structure Of Porcine Aminopeptidase-N Complexed
With Bestatin
Length = 909
Score = 63.2 bits (152), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 35/59 (59%)
Query: 72 REKFLLTSKHQCTTADFQRATSVVTHEFTHQWFGDLVTPASWNFAWLNEAFARLFEYFG 130
RE LL + ++ +R +V+ HE HQWFG+LVT A WN WLNE FA EY G
Sbjct: 297 RENALLFDPQSSSISNKERVVTVIAHELAHQWFGNLVTLAWWNDLWLNEGFASYVEYLG 355
Score = 60.1 bits (144), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 34/58 (58%)
Query: 1 EKFLLTSKGQCTTADFQRATSVVTHEFTHQWFGDLVTPASWNFAWLNEAFARLFEYFG 58
E LL + ++ +R +V+ HE HQWFG+LVT A WN WLNE FA EY G
Sbjct: 298 ENALLFDPQSSSISNKERVVTVIAHELAHQWFGNLVTLAWWNDLWLNEGFASYVEYLG 355
>pdb|4F5C|A Chain A, Crystal Structure Of The Spike Receptor Binding Domain Of
A Porcine Respiratory Coronavirus In Complex With The
Pig Aminopeptidase N Ectodomain
pdb|4F5C|B Chain B, Crystal Structure Of The Spike Receptor Binding Domain Of
A Porcine Respiratory Coronavirus In Complex With The
Pig Aminopeptidase N Ectodomain
Length = 959
Score = 63.2 bits (152), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 35/59 (59%)
Query: 72 REKFLLTSKHQCTTADFQRATSVVTHEFTHQWFGDLVTPASWNFAWLNEAFARLFEYFG 130
RE LL + ++ +R +V+ HE HQWFG+LVT A WN WLNE FA EY G
Sbjct: 340 RENALLFDPQSSSISNKERVVTVIAHELAHQWFGNLVTLAWWNDLWLNEGFASYVEYLG 398
Score = 60.1 bits (144), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 34/58 (58%)
Query: 1 EKFLLTSKGQCTTADFQRATSVVTHEFTHQWFGDLVTPASWNFAWLNEAFARLFEYFG 58
E LL + ++ +R +V+ HE HQWFG+LVT A WN WLNE FA EY G
Sbjct: 341 ENALLFDPQSSSISNKERVVTVIAHELAHQWFGNLVTLAWWNDLWLNEGFASYVEYLG 398
>pdb|4HOL|A Chain A, Crystal Structure Of Porcine Aminopeptidase-N Complexed
With Poly- Alanine
Length = 908
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 35/59 (59%)
Query: 72 REKFLLTSKHQCTTADFQRATSVVTHEFTHQWFGDLVTPASWNFAWLNEAFARLFEYFG 130
RE LL + ++ +R +V+ H+ HQWFG+LVT A WN WLNE FA EY G
Sbjct: 296 RENALLFDPQSSSISNKERVVTVIAHQLAHQWFGNLVTLAWWNDLWLNEGFASYVEYLG 354
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%)
Query: 1 EKFLLTSKGQCTTADFQRATSVVTHEFTHQWFGDLVTPASWNFAWLNEAFARLFEYFG 58
E LL + ++ +R +V+ H+ HQWFG+LVT A WN WLNE FA EY G
Sbjct: 297 ENALLFDPQSSSISNKERVVTVIAHQLAHQWFGNLVTLAWWNDLWLNEGFASYVEYLG 354
>pdb|4FYQ|A Chain A, Human Aminopeptidase N (Cd13)
pdb|4FYR|A Chain A, Human Aminopeptidase N (Cd13) In Complex With Bestatin
pdb|4FYS|A Chain A, Human Aminopeptidase N (Cd13) In Complex With Angiotensin
Iv
pdb|4FYT|A Chain A, Human Aminopeptidase N (Cd13) In Complex With Amastatin
Length = 903
Score = 60.8 bits (146), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 35/59 (59%)
Query: 72 REKFLLTSKHQCTTADFQRATSVVTHEFTHQWFGDLVTPASWNFAWLNEAFARLFEYFG 130
RE LL ++++ +R +V+ HE HQWFG+LVT WN WLNE FA EY G
Sbjct: 299 RENSLLFDPLSSSSSNKERVVTVIAHELAHQWFGNLVTIEWWNDLWLNEGFASYVEYLG 357
Score = 58.2 bits (139), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%)
Query: 1 EKFLLTSKGQCTTADFQRATSVVTHEFTHQWFGDLVTPASWNFAWLNEAFARLFEYFG 58
E LL ++++ +R +V+ HE HQWFG+LVT WN WLNE FA EY G
Sbjct: 300 ENSLLFDPLSSSSSNKERVVTVIAHELAHQWFGNLVTIEWWNDLWLNEGFASYVEYLG 357
>pdb|3Q7J|A Chain A, Engineered Thermoplasma Acidophilum F3 Factor Mimics Human
Aminopeptidase N (Apn) As A Target For Anticancer Drug
Development
pdb|3Q7J|B Chain B, Engineered Thermoplasma Acidophilum F3 Factor Mimics Human
Aminopeptidase N (Apn) As A Target For Anticancer Drug
Development
Length = 780
Score = 57.0 bits (136), Expect = 3e-09, Method: Composition-based stats.
Identities = 26/57 (45%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 72 REKFLLTSKHQCTTADFQRATSVVTHEFTHQWFGDLVTPASWNFAWLNEAFARLFEY 128
RE ++ +++ T AT V+ HE HQWFGDLVT WN WLNE+FA Y
Sbjct: 241 REIYMDIAENSAVTVKRNSAT-VIAHEIAHQWFGDLVTMKWWNDLWLNESFATFMSY 296
Score = 55.1 bits (131), Expect = 1e-08, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 26/40 (65%)
Query: 17 QRATSVVTHEFTHQWFGDLVTPASWNFAWLNEAFARLFEY 56
+ + +V+ HE HQWFGDLVT WN WLNE+FA Y
Sbjct: 257 RNSATVIAHEIAHQWFGDLVTMKWWNDLWLNESFATFMSY 296
>pdb|1Z1W|A Chain A, Crystal Structures Of The Tricorn Interacting Facor F3
From Thermoplasma Acidophilum, A Zinc Aminopeptidase In
Three Different Conformations
pdb|1Z5H|A Chain A, Crystal Structures Of The Tricorn Interacting Factor F3
From Thermoplasma Acidophilum
pdb|1Z5H|B Chain B, Crystal Structures Of The Tricorn Interacting Factor F3
From Thermoplasma Acidophilum
Length = 780
Score = 55.8 bits (133), Expect = 7e-09, Method: Composition-based stats.
Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 72 REKFLLTSKHQCTTADFQRATSVVTHEFTHQWFGDLVTPASWNFAWLNEAFARLFEY 128
RE ++ +++ T + + +V+ HE HQWFGDLVT WN WLNE+FA Y
Sbjct: 241 REIYMDIAENSAVTVK-RNSANVIAHEIAHQWFGDLVTMKWWNDLWLNESFATFMSY 296
Score = 54.7 bits (130), Expect = 2e-08, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 26/40 (65%)
Query: 17 QRATSVVTHEFTHQWFGDLVTPASWNFAWLNEAFARLFEY 56
+ + +V+ HE HQWFGDLVT WN WLNE+FA Y
Sbjct: 257 RNSANVIAHEIAHQWFGDLVTMKWWNDLWLNESFATFMSY 296
>pdb|3SE6|A Chain A, Crystal Structure Of The Human Endoplasmic Reticulum
Aminopeptidase 2
pdb|3SE6|B Chain B, Crystal Structure Of The Human Endoplasmic Reticulum
Aminopeptidase 2
Length = 967
Score = 53.1 bits (126), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 31/60 (51%)
Query: 72 REKFLLTSKHQCTTADFQRATSVVTHEFTHQWFGDLVTPASWNFAWLNEAFARLFEYFGT 131
RE LL + +D T V+ HE HQWFG+LVT WN WLNE FA+ E
Sbjct: 345 RETSLLFDPKTSSASDKLWVTRVIAHELAHQWFGNLVTMEWWNDIWLNEGFAKYMELIAV 404
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 31/63 (49%)
Query: 1 EKFLLTSKGQCTTADFQRATSVVTHEFTHQWFGDLVTPASWNFAWLNEAFARLFEYFGTR 60
E LL + +D T V+ HE HQWFG+LVT WN WLNE FA+ E
Sbjct: 346 ETSLLFDPKTSSASDKLWVTRVIAHELAHQWFGNLVTMEWWNDIWLNEGFAKYMELIAVN 405
Query: 61 MLY 63
Y
Sbjct: 406 ATY 408
>pdb|3MDJ|A Chain A, Er Aminopeptidase, Erap1, Bound To The Zinc Aminopeptidase
Inhibitor, Bestatin
pdb|3MDJ|B Chain B, Er Aminopeptidase, Erap1, Bound To The Zinc Aminopeptidase
Inhibitor, Bestatin
pdb|3MDJ|C Chain C, Er Aminopeptidase, Erap1, Bound To The Zinc Aminopeptidase
Inhibitor, Bestatin
Length = 921
Score = 52.4 bits (124), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 32/60 (53%)
Query: 69 TPIREKFLLTSKHQCTTADFQRATSVVTHEFTHQWFGDLVTPASWNFAWLNEAFARLFEY 128
T RE LL + + + T V HE HQWFG+LVT WN WLNE FA+ E+
Sbjct: 289 TTYRESALLFDAEKSSASSKLDITMTVAHELAHQWFGNLVTMEWWNDLWLNEGFAKFMEF 348
Score = 49.3 bits (116), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 30/56 (53%)
Query: 1 EKFLLTSKGQCTTADFQRATSVVTHEFTHQWFGDLVTPASWNFAWLNEAFARLFEY 56
E LL + + + T V HE HQWFG+LVT WN WLNE FA+ E+
Sbjct: 293 ESALLFDAEKSSASSKLDITMTVAHELAHQWFGNLVTMEWWNDLWLNEGFAKFMEF 348
>pdb|2YD0|A Chain A, Crystal Structure Of The Soluble Domain Of Human
Endoplasmic Reticulum Aminopeptidase 1 Erap1
Length = 897
Score = 52.0 bits (123), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 32/60 (53%)
Query: 69 TPIREKFLLTSKHQCTTADFQRATSVVTHEFTHQWFGDLVTPASWNFAWLNEAFARLFEY 128
T RE LL + + + T V HE HQWFG+LVT WN WLNE FA+ E+
Sbjct: 280 TTYRESALLFDAEKSSASSKLGITMTVAHELAHQWFGNLVTMEWWNDLWLNEGFAKFMEF 339
Score = 48.9 bits (115), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 25/42 (59%)
Query: 20 TSVVTHEFTHQWFGDLVTPASWNFAWLNEAFARLFEYFGTRM 61
T V HE HQWFG+LVT WN WLNE FA+ E+ +
Sbjct: 303 TMTVAHELAHQWFGNLVTMEWWNDLWLNEGFAKFMEFVSVSV 344
>pdb|3QNF|A Chain A, Crystal Structure Of The Open State Of Human Endoplasmic
Reticulum Aminopeptidase 1 Erap1
pdb|3QNF|B Chain B, Crystal Structure Of The Open State Of Human Endoplasmic
Reticulum Aminopeptidase 1 Erap1
pdb|3QNF|C Chain C, Crystal Structure Of The Open State Of Human Endoplasmic
Reticulum Aminopeptidase 1 Erap1
Length = 954
Score = 52.0 bits (123), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 32/60 (53%)
Query: 69 TPIREKFLLTSKHQCTTADFQRATSVVTHEFTHQWFGDLVTPASWNFAWLNEAFARLFEY 128
T RE LL + + + T V HE HQWFG+LVT WN WLNE FA+ E+
Sbjct: 331 TTYRESALLFDAEKSSASSKLGITMTVAHELAHQWFGNLVTMEWWNDLWLNEGFAKFMEF 390
Score = 48.9 bits (115), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 25/42 (59%)
Query: 20 TSVVTHEFTHQWFGDLVTPASWNFAWLNEAFARLFEYFGTRM 61
T V HE HQWFG+LVT WN WLNE FA+ E+ +
Sbjct: 354 TMTVAHELAHQWFGNLVTMEWWNDLWLNEGFAKFMEFVSVSV 395
>pdb|4E36|A Chain A, Crystal Structure Of The Human Endoplasmic Reticulum
Aminopeptidase 2 Variant N392k
pdb|4E36|B Chain B, Crystal Structure Of The Human Endoplasmic Reticulum
Aminopeptidase 2 Variant N392k
Length = 967
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 30/60 (50%)
Query: 72 REKFLLTSKHQCTTADFQRATSVVTHEFTHQWFGDLVTPASWNFAWLNEAFARLFEYFGT 131
RE LL + +D T V+ HE HQWFG+LVT WN WL E FA+ E
Sbjct: 345 RETSLLFDPKTSSASDKLWVTRVIAHELAHQWFGNLVTMEWWNDIWLKEGFAKYMELIAV 404
Score = 49.3 bits (116), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 30/63 (47%)
Query: 1 EKFLLTSKGQCTTADFQRATSVVTHEFTHQWFGDLVTPASWNFAWLNEAFARLFEYFGTR 60
E LL + +D T V+ HE HQWFG+LVT WN WL E FA+ E
Sbjct: 346 ETSLLFDPKTSSASDKLWVTRVIAHELAHQWFGNLVTMEWWNDIWLKEGFAKYMELIAVN 405
Query: 61 MLY 63
Y
Sbjct: 406 ATY 408
>pdb|3CIA|A Chain A, Crystal Structure Of Cold-Aminopeptidase From Colwellia
Psychrerythraea
pdb|3CIA|B Chain B, Crystal Structure Of Cold-Aminopeptidase From Colwellia
Psychrerythraea
pdb|3CIA|C Chain C, Crystal Structure Of Cold-Aminopeptidase From Colwellia
Psychrerythraea
pdb|3CIA|D Chain D, Crystal Structure Of Cold-Aminopeptidase From Colwellia
Psychrerythraea
Length = 605
Score = 40.8 bits (94), Expect = 2e-04, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 20/35 (57%)
Query: 21 SVVTHEFTHQWFGDLVTPASWNFAWLNEAFARLFE 55
+++ HE H W G+LVT SW WLNE F E
Sbjct: 296 NLIAHELAHSWSGNLVTNESWRDLWLNEGFTSYVE 330
Score = 40.8 bits (94), Expect = 2e-04, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 20/35 (57%)
Query: 93 SVVTHEFTHQWFGDLVTPASWNFAWLNEAFARLFE 127
+++ HE H W G+LVT SW WLNE F E
Sbjct: 296 NLIAHELAHSWSGNLVTNESWRDLWLNEGFTSYVE 330
>pdb|2XQ0|A Chain A, Structure Of Yeast Lta4 Hydrolase In Complex With Bestatin
Length = 632
Score = 40.4 bits (93), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 18/29 (62%)
Query: 21 SVVTHEFTHQWFGDLVTPASWNFAWLNEA 49
V+ HE H W G+LVT SWN WLNE
Sbjct: 297 DVIAHELAHSWSGNLVTNCSWNHFWLNEG 325
Score = 40.4 bits (93), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 18/29 (62%)
Query: 93 SVVTHEFTHQWFGDLVTPASWNFAWLNEA 121
V+ HE H W G+LVT SWN WLNE
Sbjct: 297 DVIAHELAHSWSGNLVTNCSWNHFWLNEG 325
>pdb|2XPY|A Chain A, Structure Of Native Leukotriene A4 Hydrolase From
Saccharomyces Cerevisiae
pdb|2XPZ|A Chain A, Structure Of Native Yeast Lta4 Hydrolase
Length = 632
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 18/29 (62%)
Query: 21 SVVTHEFTHQWFGDLVTPASWNFAWLNEA 49
V+ HE H W G+LVT SWN WLNE
Sbjct: 297 DVIAHELAHSWSGNLVTNCSWNHFWLNEG 325
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 18/29 (62%)
Query: 93 SVVTHEFTHQWFGDLVTPASWNFAWLNEA 121
V+ HE H W G+LVT SWN WLNE
Sbjct: 297 DVIAHELAHSWSGNLVTNCSWNHFWLNEG 325
>pdb|3U9W|A Chain A, Structure Of Human Leukotriene A4 Hydrolase In Complex
With Inhibitor Sc57461a
Length = 608
Score = 38.9 bits (89), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%)
Query: 20 TSVVTHEFTHQWFGDLVTPASWNFAWLNEAFARLFE 55
++V+ HE +H W G+LVT +W+ WLNE E
Sbjct: 288 SNVIAHEISHSWTGNLVTNKTWDHFWLNEGHTVYLE 323
Score = 38.9 bits (89), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%)
Query: 92 TSVVTHEFTHQWFGDLVTPASWNFAWLNEAFARLFE 127
++V+ HE +H W G+LVT +W+ WLNE E
Sbjct: 288 SNVIAHEISHSWTGNLVTNKTWDHFWLNEGHTVYLE 323
>pdb|1H19|A Chain A, Structure Of [e271q] Leukotriene A4 Hydrolase
Length = 611
Score = 38.9 bits (89), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%)
Query: 20 TSVVTHEFTHQWFGDLVTPASWNFAWLNEAFARLFE 55
++V+ HE +H W G+LVT +W+ WLNE E
Sbjct: 291 SNVIAHEISHSWTGNLVTNKTWDHFWLNEGHTVYLE 326
Score = 38.9 bits (89), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%)
Query: 92 TSVVTHEFTHQWFGDLVTPASWNFAWLNEAFARLFE 127
++V+ HE +H W G+LVT +W+ WLNE E
Sbjct: 291 SNVIAHEISHSWTGNLVTNKTWDHFWLNEGHTVYLE 326
>pdb|2R59|A Chain A, Leukotriene A4 Hydrolase Complexed With Inhibitor Rb3041
pdb|3B7R|L Chain L, Leukotriene A4 Hydrolase Complexed With Inhibitor Rb3040
pdb|3B7U|X Chain X, Leukotriene A4 Hydrolase Complexed With Kelatorphan
Length = 616
Score = 38.9 bits (89), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%)
Query: 20 TSVVTHEFTHQWFGDLVTPASWNFAWLNEAFARLFE 55
++V+ HE +H W G+LVT +W+ WLNE E
Sbjct: 296 SNVIAHEISHSWTGNLVTNKTWDHFWLNEGHTVYLE 331
Score = 38.9 bits (89), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%)
Query: 92 TSVVTHEFTHQWFGDLVTPASWNFAWLNEAFARLFE 127
++V+ HE +H W G+LVT +W+ WLNE E
Sbjct: 296 SNVIAHEISHSWTGNLVTNKTWDHFWLNEGHTVYLE 331
>pdb|3CHO|A Chain A, Crystal Structure Of Leukotriene A4 Hydrolase In Complex
With 2-Amino-N-[4-(Phenylmethoxy)phenyl]-Acetamide
pdb|3CHP|A Chain A, Crystal Structure Of Leukotriene A4 Hydrolase In Complex
With (3s)-3-Amino-4-Oxo-4-[(4-Phenylmethoxyphenyl)
Amino]butanoic Acid
pdb|3CHQ|A Chain A, Crystal Structure Of Leukotriene A4 Hydrolase In Complex
With N5-[4-(Phenylmethoxy)phenyl]-L-Glutamine
pdb|3CHR|A Chain A, Crystal Structure Of Leukotriene A4 Hydrolase In Complex
With 4-Amino-N-[4-(Phenylmethoxy)phenyl]-Butanamide
pdb|3CHS|A Chain A, Crystal Structure Of Leukotriene A4 Hydrolase In Complex
With (2s)-2-Amino-5-[[4-[(2s)-2-Hydroxy-2-Phenyl-
Ethoxy]phenyl]amino]-5-Oxo-Pentanoic Acid
Length = 610
Score = 38.9 bits (89), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%)
Query: 20 TSVVTHEFTHQWFGDLVTPASWNFAWLNEAFARLFE 55
++V+ HE +H W G+LVT +W+ WLNE E
Sbjct: 290 SNVIAHEISHSWTGNLVTNKTWDHFWLNEGHTVYLE 325
Score = 38.9 bits (89), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%)
Query: 92 TSVVTHEFTHQWFGDLVTPASWNFAWLNEAFARLFE 127
++V+ HE +H W G+LVT +W+ WLNE E
Sbjct: 290 SNVIAHEISHSWTGNLVTNKTWDHFWLNEGHTVYLE 325
>pdb|1HS6|A Chain A, Structure Of Leukotriene A4 Hydrolase Complexed With
Bestatin.
pdb|2VJ8|A Chain A, Complex Of Human Leukotriene A4 Hydrolase With A
Hydroxamic Acid Inhibitor
pdb|3FTS|A Chain A, Leukotriene A4 Hydrolase In Complex With Resveratrol
pdb|3FTU|A Chain A, Leukotriene A4 Hydrolase In Complex With
Dihydroresveratrol
pdb|3FTV|A Chain A, Leukotriene A4 Hydrolase In Complex With Fragment N-
(Pyridin-3-Ylmethyl)aniline
pdb|3FTW|A Chain A, Leukotriene A4 Hydrolase In Complex With Fragments N-
(Pyridin-3-Ylmethyl)aniline And Acetate
pdb|3FTX|A Chain A, Leukotriene A4 Hydrolase In Complex With
Dihydroresveratrol And Bestatin
pdb|3FTY|A Chain A, Leukotriene A4 Hydrolase In Complex With Fragment 3-
(Benzyloxy)pyridin-2-Amine
pdb|3FU0|A Chain A, Leukotriene A4 Hydrolase In Complex With Fragment 4-(4-
Fluorobenzoyl)pyridine
pdb|3FU3|A Chain A, Leukotriene A4 Hydrolase In Complex With Fragment 4-(2-
Amino-1,3-Thiazol-4-Yl)phenol
pdb|3FU5|A Chain A, Leukotriene A4 Hydrolase In Complex With (5-Thiophen-2-
Ylthiophen-2-Yl)methylamine
pdb|3FU6|A Chain A, Leukotriene A4 Hydrolase In Complex With Fragment (4-
Thiophen-2-Ylphenyl)methanamine
pdb|3FUD|A Chain A, Leukotriene A4 Hydrolase In Complex With N-Methyl-1-(2-
Thiophen-2-Ylphenyl)methanamine
pdb|3FUE|A Chain A, Leukotriene A4 Hydrolase In Complex With Fragment 5-
Chloroindole And Bestatin
pdb|3FUF|A Chain A, Leukotriene A4 Hydrolase In Complex With Fragment 5-
Fluoroindole And Bestatin
pdb|3FUH|A Chain A, Leukotriene A4 Hydrolase In Complex With Fragment 5-
Hydroxyindole And Bestatin
pdb|3FUI|A Chain A, Leukotriene A4 Hydrolase In Complex With N-Benzyl-4-[(2r)-
Pyrrolidin-2-Ylmethoxy]aniline
pdb|3FUJ|A Chain A, Leukotriene A4 Hydrolase In Complex With
5-[2-(1h-Pyrrol-1- Yl)ethoxy]-1h-Indole
pdb|3FUK|A Chain A, Leukotriene A4 Hydrolase In Complex With 1-[2-(1h-Indol-5-
Yloxy)ethyl]piperidine-4-Carboxylic Acid
pdb|3FUM|A Chain A, Leukotriene A4 Hydrolase In Complex With
(R)-Pyridin-4-Yl[4-
(2-Pyrrolidin-1-Ylethoxy)phenyl]methanol
pdb|3FUN|A Chain A, Leukotriene A4 Hydrolase In Complex With {4-[(2r)-
Pyrrolidin-2-Ylmethoxy]phenyl}(4-Thiophen-3-Ylphenyl)
Methanone
pdb|3FH5|A Chain A, Leukotriene A4 Hydrolase Complexed With Inhibitor
(2r)-2-[(4- Benzylphenoxy)methyl]pyrrolidine.
pdb|3FH7|A Chain A, Leukotriene A4 Hydrolase Complexed With Inhibitor
4-[(2s)-2-{[4-(4-
Chlorophenoxy)phenoxy]methyl}pyrrolidin-1-Yl]butanoate.
pdb|3FH8|A Chain A, Leukotriene A4 Hydrolase Complexed With Inhibitor 1-[2-(4-
Benzylphenoxy)ethyl]pyrrolidine.
pdb|3FHE|A Chain A, Leukotriene A4 Hydrolase Complexed With Inhibitor N-[3-(4-
Benzylphenoxy)propyl]-N-Methyl-Beta-Alanine.
pdb|3FTZ|A Chain A, Leukotriene A4 Hydrolase In Complex With Fragment
2-(pyridin-3- Ylmethoxy)aniline
pdb|3FUL|A Chain A, Leukotriene A4 Hydrolase In Complex With
Pyridin-4-Yl[4-(2-Pyrrolidin-
1-Ylethoxy)phenyl]methanone
pdb|4DPR|A Chain A, Structure Of Human Leukotriene A4 Hydrolase In Complex
With Inhibitor Captopril
Length = 611
Score = 38.9 bits (89), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%)
Query: 20 TSVVTHEFTHQWFGDLVTPASWNFAWLNEAFARLFE 55
++V+ HE +H W G+LVT +W+ WLNE E
Sbjct: 291 SNVIAHEISHSWTGNLVTNKTWDHFWLNEGHTVYLE 326
Score = 38.9 bits (89), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%)
Query: 92 TSVVTHEFTHQWFGDLVTPASWNFAWLNEAFARLFE 127
++V+ HE +H W G+LVT +W+ WLNE E
Sbjct: 291 SNVIAHEISHSWTGNLVTNKTWDHFWLNEGHTVYLE 326
>pdb|1SQM|A Chain A, Structure Of [r563a] Leukotriene A4 Hydrolase
Length = 610
Score = 38.9 bits (89), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%)
Query: 20 TSVVTHEFTHQWFGDLVTPASWNFAWLNEAFARLFE 55
++V+ HE +H W G+LVT +W+ WLNE E
Sbjct: 290 SNVIAHEISHSWTGNLVTNKTWDHFWLNEGHTVYLE 325
Score = 38.9 bits (89), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%)
Query: 92 TSVVTHEFTHQWFGDLVTPASWNFAWLNEAFARLFE 127
++V+ HE +H W G+LVT +W+ WLNE E
Sbjct: 290 SNVIAHEISHSWTGNLVTNKTWDHFWLNEGHTVYLE 325
>pdb|1GW6|A Chain A, Structure Of Leukotriene A4 Hydrolase D375n Mutant
Length = 610
Score = 38.9 bits (89), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%)
Query: 20 TSVVTHEFTHQWFGDLVTPASWNFAWLNEAFARLFE 55
++V+ HE +H W G+LVT +W+ WLNE E
Sbjct: 290 SNVIAHEISHSWTGNLVTNKTWDHFWLNEGHTVYLE 325
Score = 38.9 bits (89), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%)
Query: 92 TSVVTHEFTHQWFGDLVTPASWNFAWLNEAFARLFE 127
++V+ HE +H W G+LVT +W+ WLNE E
Sbjct: 290 SNVIAHEISHSWTGNLVTNKTWDHFWLNEGHTVYLE 325
>pdb|2GTQ|A Chain A, Crystal Structure Of Aminopeptidase N From Human Pathogen
Neisseria Meningitidis
Length = 867
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Query: 74 KFLLTSKHQCTTADFQRATSVVTHEFTHQWFGDLVTPASWNFAWLNEAFA--RLFEYFGT 131
KF+L T DF+ SVV HE+ H W G+ VT W L E R E+ G
Sbjct: 270 KFVLADSRTATDTDFEGIESVVGHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSGD 329
Query: 132 R 132
R
Sbjct: 330 R 330
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Query: 2 KFLLTSKGQCTTADFQRATSVVTHEFTHQWFGDLVTPASWNFAWLNEAFA--RLFEYFGT 59
KF+L T DF+ SVV HE+ H W G+ VT W L E R E+ G
Sbjct: 270 KFVLADSRTATDTDFEGIESVVGHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSGD 329
Query: 60 R 60
R
Sbjct: 330 R 330
>pdb|3B7S|A Chain A, [e296q]lta4h In Complex With Rsr Substrate
pdb|3B7T|A Chain A, [e296q]lta4h In Complex With Arg-Ala-Arg Substrate
Length = 616
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 22/36 (61%)
Query: 20 TSVVTHEFTHQWFGDLVTPASWNFAWLNEAFARLFE 55
++V+ H+ +H W G+LVT +W+ WLNE E
Sbjct: 296 SNVIAHQISHSWTGNLVTNKTWDHFWLNEGHTVYLE 331
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 22/36 (61%)
Query: 92 TSVVTHEFTHQWFGDLVTPASWNFAWLNEAFARLFE 127
++V+ H+ +H W G+LVT +W+ WLNE E
Sbjct: 296 SNVIAHQISHSWTGNLVTNKTWDHFWLNEGHTVYLE 331
>pdb|3T8V|A Chain A, A Bestatin-Based Chemical Biology Strategy Reveals
Distinct Roles For Malaria M1- And M17-Family
Aminopeptidases
Length = 895
Score = 32.3 bits (72), Expect = 0.067, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 20/38 (52%)
Query: 76 LLTSKHQCTTADFQRATSVVTHEFTHQWFGDLVTPASW 113
LL SK + R +VV HE+ HQ+ G+ VT W
Sbjct: 280 LLASKKNSIDFSYARILTVVGHEYFHQYTGNRVTLRDW 317
Score = 32.3 bits (72), Expect = 0.085, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 20/38 (52%)
Query: 4 LLTSKGQCTTADFQRATSVVTHEFTHQWFGDLVTPASW 41
LL SK + R +VV HE+ HQ+ G+ VT W
Sbjct: 280 LLASKKNSIDFSYARILTVVGHEYFHQYTGNRVTLRDW 317
>pdb|3Q43|A Chain A, X-Ray Crystal Structure Of Pfa-M1 Bound To Bestatin
Derivative 15
pdb|3Q44|A Chain A, X-Ray Crystal Structure Of Pfa-M1 Bound To Bestatin
Derivative 16
Length = 891
Score = 32.3 bits (72), Expect = 0.067, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 20/38 (52%)
Query: 76 LLTSKHQCTTADFQRATSVVTHEFTHQWFGDLVTPASW 113
LL SK + R +VV HE+ HQ+ G+ VT W
Sbjct: 281 LLASKKNSIDFSYARILTVVGHEYFHQYTGNRVTLRDW 318
Score = 32.3 bits (72), Expect = 0.085, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 20/38 (52%)
Query: 4 LLTSKGQCTTADFQRATSVVTHEFTHQWFGDLVTPASW 41
LL SK + R +VV HE+ HQ+ G+ VT W
Sbjct: 281 LLASKKNSIDFSYARILTVVGHEYFHQYTGNRVTLRDW 318
>pdb|3EBI|A Chain A, Structure Of The M1 Alanylaminopeptidase From Malaria
Complexed With The Phosphinate Dipeptide Analog
Length = 890
Score = 32.3 bits (72), Expect = 0.067, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 20/38 (52%)
Query: 76 LLTSKHQCTTADFQRATSVVTHEFTHQWFGDLVTPASW 113
LL SK + R +VV HE+ HQ+ G+ VT W
Sbjct: 281 LLASKKNSIDFSYARILTVVGHEYFHQYTGNRVTLRDW 318
Score = 32.3 bits (72), Expect = 0.085, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 20/38 (52%)
Query: 4 LLTSKGQCTTADFQRATSVVTHEFTHQWFGDLVTPASW 41
LL SK + R +VV HE+ HQ+ G+ VT W
Sbjct: 281 LLASKKNSIDFSYARILTVVGHEYFHQYTGNRVTLRDW 318
>pdb|3EBG|A Chain A, Structure Of The M1 Alanylaminopeptidase From Malaria
pdb|3EBH|A Chain A, Structure Of The M1 Alanylaminopeptidase From Malaria
Complexed With Bestatin
Length = 889
Score = 32.3 bits (72), Expect = 0.067, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 20/38 (52%)
Query: 76 LLTSKHQCTTADFQRATSVVTHEFTHQWFGDLVTPASW 113
LL SK + R +VV HE+ HQ+ G+ VT W
Sbjct: 280 LLASKKNSIDFSYARILTVVGHEYFHQYTGNRVTLRDW 317
Score = 32.3 bits (72), Expect = 0.085, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 20/38 (52%)
Query: 4 LLTSKGQCTTADFQRATSVVTHEFTHQWFGDLVTPASW 41
LL SK + R +VV HE+ HQ+ G+ VT W
Sbjct: 280 LLASKKNSIDFSYARILTVVGHEYFHQYTGNRVTLRDW 317
>pdb|1BQB|A Chain A, Aureolysin, Staphylococcus Aureus Metalloproteinase
Length = 301
Score = 32.3 bits (72), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 37/87 (42%), Gaps = 13/87 (14%)
Query: 1 EKFLLTSKGQCTTADFQRATSVVTHEFTHQWFGDLVTPASWNFAW------LNEAFARLF 54
+K + T + A VV HE TH VT + N + LNE+F+ +F
Sbjct: 120 DKMIYGDGDGRTFTNLSGANDVVAHEITHG-----VTQQTANLEYKDQSGALNESFSDVF 174
Query: 55 EYF--GTRMLYVQEIPTPIREKFLLTS 79
YF L +++ TP +E L S
Sbjct: 175 GYFVDDEDFLMGEDVYTPGKEGDALRS 201
Score = 30.8 bits (68), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 11/65 (16%)
Query: 71 IREKFLLTSKHQCTTADFQRATSVVTHEFTHQWFGDLVTPASWNFAW------LNEAFAR 124
I +K + T + A VV HE TH VT + N + LNE+F+
Sbjct: 118 IGDKMIYGDGDGRTFTNLSGANDVVAHEITHG-----VTQQTANLEYKDQSGALNESFSD 172
Query: 125 LFEYF 129
+F YF
Sbjct: 173 VFGYF 177
>pdb|3PUU|A Chain A, Crystal Structure Of Glu121gln Mutant Of E. Coli
Aminopeptidase N
Length = 891
Score = 31.2 bits (69), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 2 KFLLTSKGQCTTADFQRATSVVTHEFTHQWFGDLVTPASW 41
K++L T D+ V+ HE+ H W G+ VT W
Sbjct: 295 KYVLARTDTATDKDYLDIERVIGHEYFHNWTGNRVTCRDW 334
Score = 31.2 bits (69), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 74 KFLLTSKHQCTTADFQRATSVVTHEFTHQWFGDLVTPASW 113
K++L T D+ V+ HE+ H W G+ VT W
Sbjct: 295 KYVLARTDTATDKDYLDIERVIGHEYFHNWTGNRVTCRDW 334
>pdb|2HPO|A Chain A, Structure Of Aminopeptidase N From E. Coli Suggests A
Compartmentalized, Gated Active Site
pdb|2HPT|A Chain A, Crystal Structure Of E. Coli Pepn (Aminopeptidase N)in
Complex With Bestatin
pdb|3KED|A Chain A, Crystal Structure Of Aminopeptidase N In Complex With 2,4-
Diaminobutyric Acid
pdb|3B2P|A Chain A, Crystal Structure Of E. Coli Aminopeptidase N In Complex
With Arginine
pdb|3B2X|A Chain A, Crystal Structure Of E. Coli Aminopeptidase N In Complex
With Lysine
pdb|3B34|A Chain A, Crystal Structure Of E. Coli Aminopeptidase N In Complex
With Phenylalanine
pdb|3B37|A Chain A, Crystal Structure Of E. Coli Aminopeptidase N In Complex
With Tyrosine
pdb|3B3B|A Chain A, Crystal Structure Of E. Coli Aminopeptidase N In Complex
With Tryptophan
pdb|3QJX|A Chain A, Crystal Structure Of E. Coli Aminopeptidase N In Complex
With L-Serine
Length = 891
Score = 31.2 bits (69), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 2 KFLLTSKGQCTTADFQRATSVVTHEFTHQWFGDLVTPASW 41
K++L T D+ V+ HE+ H W G+ VT W
Sbjct: 295 KYVLARTDTATDKDYLDIERVIGHEYFHNWTGNRVTCRDW 334
Score = 31.2 bits (69), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 74 KFLLTSKHQCTTADFQRATSVVTHEFTHQWFGDLVTPASW 113
K++L T D+ V+ HE+ H W G+ VT W
Sbjct: 295 KYVLARTDTATDKDYLDIERVIGHEYFHNWTGNRVTCRDW 334
>pdb|2DQ6|A Chain A, Crystal Structure Of Aminopeptidase N From Escherichia
Coli
pdb|2DQM|A Chain A, Crystal Structure Of Aminopeptidase N Complexed With
Bestatin
pdb|2ZXG|A Chain A, Aminopeptidase N Complexed With The Aminophosphinic
Inhibitor Of Pl250, A Transition State Analogue
Length = 870
Score = 30.8 bits (68), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 2 KFLLTSKGQCTTADFQRATSVVTHEFTHQWFGDLVTPASW 41
K++L T D+ V+ HE+ H W G+ VT W
Sbjct: 274 KYVLARTDTATDKDYLDIERVIGHEYFHNWTGNRVTCRDW 313
Score = 30.8 bits (68), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 74 KFLLTSKHQCTTADFQRATSVVTHEFTHQWFGDLVTPASW 113
K++L T D+ V+ HE+ H W G+ VT W
Sbjct: 274 KYVLARTDTATDKDYLDIERVIGHEYFHNWTGNRVTCRDW 313
>pdb|2CBF|A Chain A, The X-Ray Structure Of A Cobalamin Biosynthetic Enzyme,
Cobalt Precorrin-4 Methyltransferase, Cbif, From
Bacillus Megaterium, With The His-Tag Cleaved Off
Length = 234
Score = 27.7 bits (60), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 3/60 (5%)
Query: 68 PTPIREKFLLTSKHQCTTADFQRA--TSVVTHEFTHQ-WFGDLVTPASWNFAWLNEAFAR 124
P P EK +KH+CT A F + T V EF + W D + W +E R
Sbjct: 146 PVPEFEKLTDLAKHKCTIALFLSSTLTKKVMKEFINAGWSEDTPVVVVYKATWPDEKIVR 205
>pdb|1CBF|A Chain A, The X-ray Structure Of A Cobalamin Biosynthetic Enzyme,
Cobalt Precorrin-4 Methyltransferase, Cbif
Length = 285
Score = 27.3 bits (59), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 3/60 (5%)
Query: 68 PTPIREKFLLTSKHQCTTADFQRA--TSVVTHEFTHQ-WFGDLVTPASWNFAWLNEAFAR 124
P P EK +KH+CT A F + T V EF + W D + W +E R
Sbjct: 163 PVPEFEKLTDLAKHKCTIALFLSSTLTKKVMKEFINAGWSEDTPVVVVYKATWPDEKIVR 222
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.326 0.134 0.451
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,055,809
Number of Sequences: 62578
Number of extensions: 146119
Number of successful extensions: 390
Number of sequences better than 100.0: 35
Number of HSP's better than 100.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 326
Number of HSP's gapped (non-prelim): 67
length of query: 132
length of database: 14,973,337
effective HSP length: 88
effective length of query: 44
effective length of database: 9,466,473
effective search space: 416524812
effective search space used: 416524812
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 46 (22.3 bits)