RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy5111
         (132 letters)



>d3b7sa3 d.92.1.13 (A:209-460) Leukotriene A4 hydrolase catalytic
           domain {Human (Homo sapiens) [TaxId: 9606]}
          Length = 252

 Score = 35.0 bits (79), Expect = 0.001
 Identities = 25/133 (18%), Positives = 45/133 (33%), Gaps = 4/133 (3%)

Query: 1   EKFLLTSKGQCTTADFQRATSVVTHEFTHQWFGDLVTPASWNFAWLNEAFARLFEYFGTR 60
           E   LT       A  +  ++V+ H+ +H W G+LVT  +W+  WLNE      E     
Sbjct: 63  ENPCLTFVTPTLLAGDKSLSNVIAHQISHSWTGNLVTNKTWDHFWLNEGHTVYLERHICG 122

Query: 61  MLYVQEIPTPIREKFLLTSKHQ----CTTADFQRATSVVTHEFTHQWFGDLVTPASWNFA 116
            L+ ++             ++       T  F +    +T       +  +     +   
Sbjct: 123 RLFGEKFRHFNALGGWGELQNSVKTFGETHPFTKLVVDLTDIDPDVAYSSVPYEKGFALL 182

Query: 117 WLNEAFARLFEYF 129
           +  E      E F
Sbjct: 183 FYLEQLLGGPEIF 195


>d1u4ga_ d.92.1.2 (A:) Elastase {Pseudomonas aeruginosa [TaxId:
           287]}
          Length = 298

 Score = 25.3 bits (55), Expect = 2.3
 Identities = 8/38 (21%), Positives = 15/38 (39%), Gaps = 1/38 (2%)

Query: 18  RATSVVTHEFTHQWFGDLVTPASWNFAW-LNEAFARLF 54
            +  V  HE +H +            +  +NEAF+ + 
Sbjct: 133 VSLDVAAHEVSHGFTEQNSGLIYRGQSGGMNEAFSDMA 170



 Score = 25.3 bits (55), Expect = 2.3
 Identities = 8/38 (21%), Positives = 15/38 (39%), Gaps = 1/38 (2%)

Query: 90  RATSVVTHEFTHQWFGDLVTPASWNFAW-LNEAFARLF 126
            +  V  HE +H +            +  +NEAF+ + 
Sbjct: 133 VSLDVAAHEVSHGFTEQNSGLIYRGQSGGMNEAFSDMA 170


>d1bqba_ d.92.1.2 (A:) Aureolysin {Staphylococcus aureus [TaxId:
           1280]}
          Length = 301

 Score = 23.8 bits (51), Expect = 9.7
 Identities = 13/44 (29%), Positives = 19/44 (43%), Gaps = 1/44 (2%)

Query: 12  TTADFQRATSVVTHEFTHQWFGDLVTPASWNFAW-LNEAFARLF 54
           T  +   A  VV HE TH            + +  LNE+F+ +F
Sbjct: 131 TFTNLSGANDVVAHEITHGVTQQTANLEYKDQSGALNESFSDVF 174



 Score = 23.8 bits (51), Expect = 9.7
 Identities = 13/44 (29%), Positives = 19/44 (43%), Gaps = 1/44 (2%)

Query: 84  TTADFQRATSVVTHEFTHQWFGDLVTPASWNFAW-LNEAFARLF 126
           T  +   A  VV HE TH            + +  LNE+F+ +F
Sbjct: 131 TFTNLSGANDVVAHEITHGVTQQTANLEYKDQSGALNESFSDVF 174


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.326    0.134    0.451 

Gapped
Lambda     K      H
   0.267   0.0425    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 529,858
Number of extensions: 21930
Number of successful extensions: 68
Number of sequences better than 10.0: 1
Number of HSP's gapped: 68
Number of HSP's successfully gapped: 9
Length of query: 132
Length of database: 2,407,596
Length adjustment: 76
Effective length of query: 56
Effective length of database: 1,364,116
Effective search space: 76390496
Effective search space used: 76390496
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 48 (23.0 bits)