BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5112
(184 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9W5D0|Y34F_DROME Uncharacterized protein CG42248 OS=Drosophila melanogaster GN=CG42248
PE=1 SV=4
Length = 1820
Score = 246 bits (627), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 119/178 (66%), Positives = 139/178 (78%), Gaps = 16/178 (8%)
Query: 1 MEVLSILLKNPYHHSLPHSIPVHLLNGAYQVTGFDGSTTIEEFLQTLNSEIDCRDSNVSG 60
MEVLSILLKNPYHHSLPH+IPVH++N YQV FDGSTTIEEF TL E+ RD+ +G
Sbjct: 1372 MEVLSILLKNPYHHSLPHAIPVHMMNSTYQVVSFDGSTTIEEFQATLAHELGTRDA-TNG 1430
Query: 61 FALFSDDPIDKNLEHYLEPELKVSQTKGKYPLKIYVMLCDVISKWETALREKGTGKFENN 120
F LFSDDPI+K+LEHYLEP K LCDVISKWETALREKG+GKFEN+
Sbjct: 1431 FCLFSDDPIEKDLEHYLEPLAK---------------LCDVISKWETALREKGSGKFENS 1475
Query: 121 RCVQFIYKNRLYFRSLSKKETDRERLLLCYQTNQQVVLGRFPLTKELALELAALLSQV 178
R +Q YKNRLY++ K ETD+ERLLLCYQTN Q+V GRFPL++ELALELA+L+SQ+
Sbjct: 1476 RVIQLSYKNRLYWKHTIKCETDKERLLLCYQTNSQIVQGRFPLSRELALELASLMSQI 1533
>sp|Q00IB7|PKHH1_DANRE Pleckstrin homology domain-containing family H member 1 OS=Danio
rerio GN=plekhh1 PE=2 SV=1
Length = 1433
Score = 211 bits (538), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 102/178 (57%), Positives = 127/178 (71%), Gaps = 15/178 (8%)
Query: 1 MEVLSILLKNPYHHSLPHSIPVHLLNGAYQVTGFDGSTTIEEFLQTLNSEIDCRDSNVSG 60
ME+LSILL+NPYHHSLP SIPVH +N Y+V GFDGSTT+EEFL T+N R +SG
Sbjct: 1044 MEILSILLRNPYHHSLPFSIPVHFMNNTYEVVGFDGSTTVEEFLNTVNQRTGMRKPQISG 1103
Query: 61 FALFSDDPIDKNLEHYLEPELKVSQTKGKYPLKIYVMLCDVISKWETALREKGTGKFENN 120
FALF+DDP K+LEH L+P K+ CDVISKWE AL+E GK+E
Sbjct: 1104 FALFTDDPSGKDLEHCLQPANKI---------------CDVISKWEQALKELHPGKYEGT 1148
Query: 121 RCVQFIYKNRLYFRSLSKKETDRERLLLCYQTNQQVVLGRFPLTKELALELAALLSQV 178
R V+ YK+RL FR+ +K ET+RERLLL YQ N +V+ G FP++KELALE+AAL++QV
Sbjct: 1149 RTVRLTYKSRLCFRAQAKGETERERLLLAYQVNDEVLQGHFPVSKELALEVAALMAQV 1206
>sp|Q9ULM0|PKHH1_HUMAN Pleckstrin homology domain-containing family H member 1 OS=Homo
sapiens GN=PLEKHH1 PE=2 SV=2
Length = 1364
Score = 209 bits (533), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 103/179 (57%), Positives = 128/179 (71%), Gaps = 16/179 (8%)
Query: 1 MEVLSILLKNPYHHSLPHSIPVHLLNGAYQVTGFDGSTTIEEFLQTLNSEIDCRDSNVSG 60
MEV+SILL+NP+HHSLP SIPVH NG Y V GFDGS+T++EFLQ LN EI R + SG
Sbjct: 980 MEVVSILLRNPFHHSLPFSIPVHFTNGTYHVVGFDGSSTVDEFLQRLNQEIGMRKPSHSG 1039
Query: 61 FALFSDDPIDKNLEHYLEPELKVSQTKGKYPLKIYVMLCDVISKWETALREKGTGKFENN 120
FALF+DDP ++LEH L+ +K+ CD ISKWE A++E GK E
Sbjct: 1040 FALFTDDPSGRDLEHCLQGSVKI---------------CDAISKWEQAMKELHPGKSEGG 1084
Query: 121 -RCVQFIYKNRLYFRSLSKKETDRERLLLCYQTNQQVVLGRFPLTKELALELAALLSQV 178
R V+ +YKNRLYFRS K ETDRERLLL QT++++V GRFP+ KELALE+AAL++QV
Sbjct: 1085 TRVVKLMYKNRLYFRSQVKGETDRERLLLASQTSREIVAGRFPINKELALEMAALMAQV 1143
>sp|Q8IVE3|PKHH2_HUMAN Pleckstrin homology domain-containing family H member 2 OS=Homo
sapiens GN=PLEKHH2 PE=2 SV=2
Length = 1493
Score = 209 bits (532), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 102/178 (57%), Positives = 124/178 (69%), Gaps = 15/178 (8%)
Query: 1 MEVLSILLKNPYHHSLPHSIPVHLLNGAYQVTGFDGSTTIEEFLQTLNSEIDCRDSNVSG 60
ME+LS LL+NPYHHSLP SIPVH +NG YQV GFD STT+EEFL TLN + R SG
Sbjct: 1104 MEILSTLLRNPYHHSLPFSIPVHFMNGIYQVVGFDASTTVEEFLNTLNQDTGMRKPAQSG 1163
Query: 61 FALFSDDPIDKNLEHYLEPELKVSQTKGKYPLKIYVMLCDVISKWETALREKGTGKFENN 120
FALF+DDP ++LEH L+ +K+ CD+ISKWE A +E+ GK E
Sbjct: 1164 FALFTDDPSGRDLEHCLQGNIKI---------------CDIISKWEQASKEQQPGKCEGT 1208
Query: 121 RCVQFIYKNRLYFRSLSKKETDRERLLLCYQTNQQVVLGRFPLTKELALELAALLSQV 178
R V+ YKNRLYF ++ ETDRE+LLL YQTN Q++ G FPL K+LALE+AALLSQV
Sbjct: 1209 RTVRLTYKNRLYFSVQARGETDREKLLLMYQTNDQIINGLFPLNKDLALEMAALLSQV 1266
>sp|Q80TI1|PKHH1_MOUSE Pleckstrin homology domain-containing family H member 1 OS=Mus
musculus GN=Plekhh1 PE=2 SV=2
Length = 1356
Score = 207 bits (528), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 102/179 (56%), Positives = 127/179 (70%), Gaps = 16/179 (8%)
Query: 1 MEVLSILLKNPYHHSLPHSIPVHLLNGAYQVTGFDGSTTIEEFLQTLNSEIDCRDSNVSG 60
MEV+SILL+NP+HHSLP SIPVH NG YQV GFDGS+T++EFLQ LN E R + SG
Sbjct: 974 MEVVSILLRNPFHHSLPFSIPVHFANGTYQVVGFDGSSTVDEFLQRLNQETGMRKPSQSG 1033
Query: 61 FALFSDDPIDKNLEHYLEPELKVSQTKGKYPLKIYVMLCDVISKWETALREKGTGKFENN 120
FALF+DDP ++LEH L+ +K+ CD ISKWE L+E GK E
Sbjct: 1034 FALFTDDPSGRDLEHCLQGRVKI---------------CDAISKWEQTLKELHPGKSEGG 1078
Query: 121 -RCVQFIYKNRLYFRSLSKKETDRERLLLCYQTNQQVVLGRFPLTKELALELAALLSQV 178
R V+ +YKNRLYFRS K ET+RERLLL +Q + ++V GRFP+TKELALE+AAL++QV
Sbjct: 1079 TRVVKLMYKNRLYFRSQVKGETERERLLLAFQASGEIVAGRFPVTKELALEMAALMAQV 1137
>sp|Q8C115|PKHH2_MOUSE Pleckstrin homology domain-containing family H member 2 OS=Mus
musculus GN=Plekhh2 PE=2 SV=3
Length = 1491
Score = 185 bits (470), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 99/178 (55%), Positives = 123/178 (69%), Gaps = 15/178 (8%)
Query: 1 MEVLSILLKNPYHHSLPHSIPVHLLNGAYQVTGFDGSTTIEEFLQTLNSEIDCRDSNVSG 60
ME+LS LL+NPYHHS P SIPVH +NG YQV GFD STT+EEFL TLN + R SG
Sbjct: 1103 MEILSTLLRNPYHHSRPFSIPVHFMNGLYQVVGFDASTTVEEFLNTLNQDTGMRKPAQSG 1162
Query: 61 FALFSDDPIDKNLEHYLEPELKVSQTKGKYPLKIYVMLCDVISKWETALREKGTGKFENN 120
FALF+DDP ++LEH L+ +K+ CD+ISKWE A +E+ GK E +
Sbjct: 1163 FALFTDDPSGRDLEHCLQGNIKI---------------CDIISKWEQASKEQQPGKCEGS 1207
Query: 121 RCVQFIYKNRLYFRSLSKKETDRERLLLCYQTNQQVVLGRFPLTKELALELAALLSQV 178
R V+ YKNRLYF ++ ETDRE+ LL YQTN Q++ G FPL K+LALE+AALL+QV
Sbjct: 1208 RTVRLTYKNRLYFSVQARGETDREKTLLLYQTNDQIINGLFPLNKDLALEMAALLAQV 1265
>sp|Q3AZH7|RNZ_SYNS9 Ribonuclease Z OS=Synechococcus sp. (strain CC9902) GN=rnz PE=3
SV=1
Length = 319
Score = 33.5 bits (75), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 48/117 (41%), Gaps = 35/117 (29%)
Query: 60 GFALFSDDPIDKNLEHYLEPELKVSQTKGKYPLKIY-VMLCDVISKWETALREKGTGKFE 118
G L+ DP LE YL L+ S T+ YPLK++ V C E GT +E
Sbjct: 87 GVDLYGPDP----LESYLNGVLRTSSTRIGYPLKVHRVHDC----------AENGTLVYE 132
Query: 119 NN----RCVQFIYKNRLYFRSLSKKETDRERLLLCYQTNQQVVLGRFPLTKELALEL 171
++ RC ++ Y Y+ +Q+ + GRF + K L++
Sbjct: 133 DDDLMVRCTPLTHRVPAY----------------AYRVDQKPLAGRFDIAKAKDLQI 173
>sp|Q3AHP8|RNZ_SYNSC Ribonuclease Z OS=Synechococcus sp. (strain CC9605) GN=rnz PE=3
SV=1
Length = 319
Score = 32.0 bits (71), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 52/132 (39%), Gaps = 33/132 (25%)
Query: 44 LQTLNSEIDCRDSNVSGFALFSDDPIDKNLEHYLEPELKVSQTKGKYPLKIYVMLCDVIS 103
L L + + S+ +G L+ DP LE YL L+ S T+ YPL ++ +
Sbjct: 71 LPGLLASLGLAGSSSAGVDLYGPDP----LESYLNGVLRTSSTRIGYPLAVHRV------ 120
Query: 104 KWETALREKGTGKFENN----RCVQFIYKNRLYFRSLSKKETDRERLLLCYQTNQQVVLG 159
E+GT FE++ RC ++ Y Y+ Q+ + G
Sbjct: 121 ---RDAAEQGTLLFEDDDFTVRCTLLTHRVPAY----------------AYRIEQKPLAG 161
Query: 160 RFPLTKELALEL 171
RF + K L +
Sbjct: 162 RFDIEKARELNI 173
>sp|Q04924|GLU2B_YEAST Glucosidase 2 subunit beta OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=GTB1 PE=1 SV=1
Length = 702
Score = 30.8 bits (68), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 24 LLNGAYQVTGFDGSTTIEEFLQTLNSEIDCRDSNVSGFALFSDDPIDKNLEHYL 77
+L G ++ +GF+ +E++ + L + D + +S A DD D N++HY+
Sbjct: 574 VLIGRFKTSGFNVDLNMEKYAEHLKATYDEKSDLISNLAAIQDD--DGNMQHYV 625
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.137 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 67,133,916
Number of Sequences: 539616
Number of extensions: 2709662
Number of successful extensions: 6125
Number of sequences better than 100.0: 15
Number of HSP's better than 100.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 6108
Number of HSP's gapped (non-prelim): 18
length of query: 184
length of database: 191,569,459
effective HSP length: 110
effective length of query: 74
effective length of database: 132,211,699
effective search space: 9783665726
effective search space used: 9783665726
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)