Query psy5114
Match_columns 394
No_of_seqs 275 out of 1198
Neff 4.9
Searched_HMMs 29240
Date Fri Aug 16 17:36:30 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5114.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/5114hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3flv_A Acyl-COA-binding domain 100.0 5.2E-32 1.8E-36 233.0 8.9 99 79-177 21-119 (119)
2 3fp5_A Acyl-COA binding protei 100.0 2.2E-31 7.6E-36 225.2 11.1 103 80-183 2-104 (106)
3 3epy_A Acyl-COA-binding domain 100.0 2.6E-30 8.8E-35 212.4 10.7 88 80-171 2-89 (89)
4 1hbk_A ACBP, acyl-COA binding 100.0 1.3E-29 4.6E-34 208.0 10.5 87 82-170 2-88 (89)
5 2wh5_A Acyl-COA-binding domain 100.0 1.1E-29 3.8E-34 214.8 9.8 90 81-170 7-96 (106)
6 1st7_A ACBP, acyl-COA-binding 100.0 1.3E-29 4.4E-34 206.9 9.6 85 82-170 1-85 (86)
7 2cqu_A Peroxisomal D3,D2-enoyl 100.0 2.7E-29 9.1E-34 215.5 11.1 95 73-171 7-101 (116)
8 2cb8_A Acyl-COA-binding protei 100.0 4E-29 1.4E-33 204.5 11.0 84 83-170 3-86 (87)
9 2cop_A Acyl-coenzyme A binding 100.0 1.8E-28 6.3E-33 208.3 9.7 88 80-171 6-93 (109)
10 2lbb_A Acyl COA binding protei 99.9 1.9E-28 6.4E-33 204.0 7.4 84 84-170 12-95 (96)
11 3fp5_A Acyl-COA binding protei 99.8 1.4E-20 4.8E-25 159.1 4.8 72 23-99 2-74 (106)
12 3epy_A Acyl-COA-binding domain 99.8 3.3E-20 1.1E-24 152.3 4.1 70 23-101 2-72 (89)
13 2wh5_A Acyl-COA-binding domain 99.8 9.5E-20 3.2E-24 154.0 4.0 73 24-101 7-80 (106)
14 3flv_A Acyl-COA-binding domain 99.8 5.5E-20 1.9E-24 158.3 2.0 71 24-99 23-94 (119)
15 1hbk_A ACBP, acyl-COA binding 99.8 3.1E-19 1.1E-23 146.4 4.1 69 25-100 2-71 (89)
16 1st7_A ACBP, acyl-COA-binding 99.8 2.7E-19 9.2E-24 145.8 3.6 67 25-100 1-68 (86)
17 2cqu_A Peroxisomal D3,D2-enoyl 99.7 5.1E-19 1.8E-23 151.7 5.2 89 15-119 5-95 (116)
18 2cb8_A Acyl-COA-binding protei 99.7 6.8E-19 2.3E-23 143.9 4.4 67 25-100 2-69 (87)
19 2cop_A Acyl-coenzyme A binding 99.7 1.6E-18 5.4E-23 147.2 3.5 68 24-100 7-75 (109)
20 2lbb_A Acyl COA binding protei 99.7 7.6E-19 2.6E-23 146.1 0.2 71 21-100 7-78 (96)
21 1mix_A Talin; focal adhesion, 97.8 3.7E-05 1.3E-09 69.2 7.7 71 100-171 32-116 (206)
22 4f7g_A Talin-1; alpha-helix bu 93.4 0.16 5.3E-06 46.4 7.0 70 100-170 43-126 (222)
23 3qij_A Protein 4.1; cytoskelet 93.3 0.07 2.4E-06 51.1 4.8 71 100-171 124-206 (296)
24 1ef1_A Moesin; membrane, FERM 92.6 0.2 6.7E-06 47.3 6.7 70 100-170 110-199 (294)
25 1h4r_A Merlin; FERM, neurofibr 92.3 0.21 7.2E-06 47.7 6.5 70 100-170 130-219 (314)
26 3ivf_A Talin-1; FERM domain, c 90.7 0.54 1.8E-05 46.0 7.6 65 100-164 197-275 (371)
27 2i1j_A Moesin; FERM, coiled-co 89.4 0.45 1.5E-05 50.1 6.2 71 100-171 113-203 (575)
28 3au4_A Myosin-X; protein-prote 82.5 1.7 5.8E-05 44.9 6.2 71 100-171 335-452 (555)
29 2akf_A Coronin-1A; coiled coil 80.4 3.2 0.00011 27.3 4.6 28 321-348 4-31 (32)
30 1mix_A Talin; focal adhesion, 77.1 4.5 0.00015 35.7 6.4 69 23-98 16-97 (206)
31 4dxa_B KREV interaction trappe 76.4 1.8 6.2E-05 41.5 3.8 64 100-163 128-216 (322)
32 2al6_A Focal adhesion kinase 1 74.0 3.2 0.00011 40.8 5.0 69 102-171 131-225 (375)
33 1aq5_A Matrilin-1, CMP, cartil 65.4 12 0.00041 27.0 5.1 31 315-345 15-45 (47)
34 3pvl_A Myosin VIIA isoform 1; 63.1 4.1 0.00014 43.4 3.3 72 100-171 384-477 (655)
35 1gk7_A Vimentin; intermediate 50.4 23 0.00077 24.4 4.2 28 322-349 5-32 (39)
36 4eku_A Protein-tyrosine kinase 43.5 26 0.0009 34.9 5.3 68 103-171 152-245 (392)
37 2wuj_A Septum site-determining 35.6 36 0.0012 24.9 3.7 30 315-344 26-55 (57)
38 2bez_C E2 glycoprotein; coiled 35.2 55 0.0019 25.8 4.8 30 315-344 47-76 (77)
39 1urq_A M-tomosyn isoform; tran 32.7 81 0.0028 23.6 5.3 33 315-347 7-39 (63)
40 1sfc_A VAMP 2, protein (synapt 31.1 78 0.0027 25.5 5.3 33 315-347 33-65 (96)
41 1l4a_A Synaptobrevin; snare, s 26.6 1.1E+02 0.0038 23.6 5.3 33 315-347 18-50 (80)
42 3b5n_A Synaptobrevin homolog 1 26.6 1.2E+02 0.0042 22.0 5.3 33 315-347 5-37 (61)
43 3ci9_A Heat shock factor-bindi 26.5 59 0.002 23.4 3.3 32 314-345 4-46 (48)
44 1n7s_A Vesicle-associated memb 25.0 1.4E+02 0.0047 21.9 5.3 33 315-347 7-39 (63)
45 1gl2_A Endobrevin; membrane pr 24.8 1.4E+02 0.0047 22.1 5.3 33 315-347 12-44 (65)
46 3ghg_A Fibrinogen alpha chain; 23.4 86 0.003 32.9 5.2 33 315-348 124-156 (562)
47 3hd7_A Vesicle-associated memb 20.8 1.5E+02 0.0052 23.4 5.2 33 315-347 8-40 (91)
No 1
>3flv_A Acyl-COA-binding domain-containing protein 5; lipid binding, structural genomics, struct genomics consortium, SGC, lipid-binding, membrane; HET: STE COA; 1.70A {Homo sapiens}
Probab=99.97 E-value=5.2e-32 Score=233.03 Aligned_cols=99 Identities=60% Similarity=1.109 Sum_probs=89.8
Q ss_pred CCChHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhhhhcccCCCCCCCCCcccHHHHHHHHHHHhcCCCCHHHHHHHH
Q psy5114 79 KMTTEEKFHAAVNVIRNLPKNGAYQPSNDLMLRFYSYFKQATEGPCKQPKPSFWDVVRKAKWDAWKKLGNMGKEEAMEAY 158 (394)
Q Consensus 79 mmdleekFeaAw~~VK~L~kega~~ps~e~~L~LYalYKQAT~Gdc~~prPg~~D~~~raKwdAW~~lggMS~eEAm~~Y 158 (394)
|-+++++|+.|++.|+.++++|+.+|++|++|+|||||||||+|||+.++||+||++||+||+||++++|||++|||++|
T Consensus 21 ~~dLe~~F~~A~~~Vk~l~~~g~~~ps~d~~L~LYaLyKQAT~Gd~~~~~Pg~~d~~graKw~AW~~l~gmS~eeAm~~Y 100 (119)
T 3flv_A 21 QSMHETRFEAAVKVIQSLPKNGSFQPTNEMMLKFYSFYKQATEGPCKLSRPGFWDPIGRYKWDAWSSLGDMTKEEAMIAY 100 (119)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHSSCCCCHHHHHHHHHHHHHHHTCSCCSCCCCTTCHHHHHHHHHHHHTTTCCHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHhCcccCCCCCCHHHHHHHHHHHHHHhcCCCCCCCCCccCHHHHHHHHHHHHccCCCHHHHHHHH
Confidence 44688999999999999999888899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCcchHH
Q psy5114 159 VEELKKIVETMAYNDNVET 177 (394)
Q Consensus 159 Ve~v~~ii~~~~~t~~~~~ 177 (394)
|+++++|+++|++++++++
T Consensus 101 I~~v~~l~~~~~~~~~~~~ 119 (119)
T 3flv_A 101 VEEMKKIIETMPMTEKVEE 119 (119)
T ss_dssp HHHHHHHHHHSCC------
T ss_pred HHHHHHHHhhCCCCccccC
Confidence 9999999999999998763
No 2
>3fp5_A Acyl-COA binding protein; ACBP, cacao disease, fatty acid metabolism, lipid binding protein; HET: MES; 1.61A {Moniliophthora perniciosa} SCOP: a.11.1.0
Probab=99.97 E-value=2.2e-31 Score=225.19 Aligned_cols=103 Identities=38% Similarity=0.726 Sum_probs=97.6
Q ss_pred CChHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhhhhcccCCCCCCCCCcccHHHHHHHHHHHhcCCCCHHHHHHHHH
Q psy5114 80 MTTEEKFHAAVNVIRNLPKNGAYQPSNDLMLRFYSYFKQATEGPCKQPKPSFWDVVRKAKWDAWKKLGNMGKEEAMEAYV 159 (394)
Q Consensus 80 mdleekFeaAw~~VK~L~kega~~ps~e~~L~LYalYKQAT~Gdc~~prPg~~D~~~raKwdAW~~lggMS~eEAm~~YV 159 (394)
|+++++|+.|++.|+.++++|+.+|++|++|+|||||||||+|||+.++||+||++||+||+||++++|||++|||++||
T Consensus 2 ~~~~~~F~~A~~~vk~l~~~g~~~ps~~~~L~LYalyKQAt~Gd~~~~~Pg~~d~~~raKw~AW~~l~gmS~eeA~~~YI 81 (106)
T 3fp5_A 2 HMSKAKFDKAVEIVQSLPKDGPIKPTQDEQLYFYKYFKQATVGDVNISRPGLMDFTGKAKWDAWKSVEGTSKEVAYQKYV 81 (106)
T ss_dssp CCCHHHHHHHHHHHHHCCSSSSSCCCHHHHHHHHHHHHHHHTCSCCSCCCCTTCHHHHHHHHHHHTTTTCCHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHhcccccCCCCCHHHHHHHHHHHHHHhcCCCCCCCCCccchHHHHHHHHHHHccCCCHHHHHHHHH
Confidence 67799999999999999999988999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCcchHHhhhccc
Q psy5114 160 EELKKIVETMAYNDNVETFMGSLD 183 (394)
Q Consensus 160 e~v~~ii~~~~~t~~~~~~l~~~~ 183 (394)
++|++++++ .-++.+.+++..|+
T Consensus 82 ~~v~~l~~~-~~~~~~~~~~~~le 104 (106)
T 3fp5_A 82 EKLLEILKK-ADTEESKKYIAEIE 104 (106)
T ss_dssp HHHHHHHHH-HCSHHHHHHHHHHH
T ss_pred HHHHHHhcc-cCcHHHHHHHHHHh
Confidence 999999999 67778888887653
No 3
>3epy_A Acyl-COA-binding domain-containing protein 7; acyl-COA binding protein, fatty acid, lipid metabolism, structural genomics; HET: COA PLM; 2.00A {Homo sapiens} SCOP: a.11.1.1
Probab=99.96 E-value=2.6e-30 Score=212.44 Aligned_cols=88 Identities=28% Similarity=0.557 Sum_probs=84.4
Q ss_pred CChHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhhhhcccCCCCCCCCCcccHHHHHHHHHHHhcCCCCHHHHHHHHH
Q psy5114 80 MTTEEKFHAAVNVIRNLPKNGAYQPSNDLMLRFYSYFKQATEGPCKQPKPSFWDVVRKAKWDAWKKLGNMGKEEAMEAYV 159 (394)
Q Consensus 80 mdleekFeaAw~~VK~L~kega~~ps~e~~L~LYalYKQAT~Gdc~~prPg~~D~~~raKwdAW~~lggMS~eEAm~~YV 159 (394)
|+++++|+.|++.|+.++. +|++|++|+|||||||||+|||+.++||+||++||+||+||++++|||++|||++||
T Consensus 2 m~L~~~F~~A~~~vk~l~~----~p~~~~~L~lYalyKQAt~Gd~~~~~Pg~~d~~~~aKw~AW~~l~g~s~eeA~~~Yi 77 (89)
T 3epy_A 2 MALQADFDRAAEDVRKLKA----RPDDGELKELYGLYKQAIVGDINIACPGMLDLKGKAKWEAWNLKKGLSTEDATSAYI 77 (89)
T ss_dssp CHHHHHHHHHHHHGGGCSS----CCCHHHHHHHHHHHHHHHTCSCCSCCTTTTCHHHHHHHHHHHTTTTCCHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHcCC----CcCHHHHHHHHHHHHHHhhCCCCCCCCcccchHHHHHHHHHHHhhCCCHHHHHHHHH
Confidence 6789999999999999986 599999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCC
Q psy5114 160 EELKKIVETMAY 171 (394)
Q Consensus 160 e~v~~ii~~~~~ 171 (394)
+++++++++++.
T Consensus 78 ~~v~~l~~ky~~ 89 (89)
T 3epy_A 78 SKAKELIEKYGI 89 (89)
T ss_dssp HHHHHHHHHHCC
T ss_pred HHHHHHhhhhcC
Confidence 999999998863
No 4
>1hbk_A ACBP, acyl-COA binding protein; fatty acid metabolism; HET: COA MYR; 2.0A {Plasmodium falciparum} SCOP: a.11.1.1
Probab=99.96 E-value=1.3e-29 Score=207.98 Aligned_cols=87 Identities=31% Similarity=0.626 Sum_probs=82.3
Q ss_pred hHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhhhhcccCCCCCCCCCcccHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Q psy5114 82 TEEKFHAAVNVIRNLPKNGAYQPSNDLMLRFYSYFKQATEGPCKQPKPSFWDVVRKAKWDAWKKLGNMGKEEAMEAYVEE 161 (394)
Q Consensus 82 leekFeaAw~~VK~L~kega~~ps~e~~L~LYalYKQAT~Gdc~~prPg~~D~~~raKwdAW~~lggMS~eEAm~~YVe~ 161 (394)
++++|+.|++.|+.+++ ...|++|++|+|||||||||+|||+.++||+||++||+||+||++++|||++|||++||++
T Consensus 2 l~~~F~~A~~~v~~l~~--~~~~~~~~~L~LYalyKQAt~Gd~~~~~Pg~~d~~~~aKw~AW~~l~gms~eeA~~~YI~~ 79 (89)
T 1hbk_A 2 MAQVFEECVSFINGLPR--TINLPNELKLDLYKYYKQSTIGNCNIKEPSAHKYIDRKKYEAWKSVENLNREDAQKRYVDI 79 (89)
T ss_dssp HHHHHHHHHHHHHHSCT--TCCCCHHHHHHHHHHHHHHHTCSCCSCCCCTTSHHHHHHHHHHHHTTTCCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhcCC--cCCCCHHHHHHHHHHHHHhhcCCCCCCCCCccCHHhHHHHHHHHHhcCCCHHHHHHHHHHH
Confidence 57899999999999985 3479999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcC
Q psy5114 162 LKKIVETMA 170 (394)
Q Consensus 162 v~~ii~~~~ 170 (394)
|++++++|.
T Consensus 80 v~~l~~~~~ 88 (89)
T 1hbk_A 80 VSEIFPYWQ 88 (89)
T ss_dssp HHHHCTTTT
T ss_pred HHHHccccc
Confidence 999998874
No 5
>2wh5_A Acyl-COA-binding domain-containing protein 4; alternative splicing, fatty acid metabolism, lipid transport, lipid binding protein; HET: STE ST9 COA; 2.60A {Homo sapiens}
Probab=99.96 E-value=1.1e-29 Score=214.83 Aligned_cols=90 Identities=56% Similarity=1.094 Sum_probs=83.7
Q ss_pred ChHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhhhhcccCCCCCCCCCcccHHHHHHHHHHHhcCCCCHHHHHHHHHH
Q psy5114 81 TTEEKFHAAVNVIRNLPKNGAYQPSNDLMLRFYSYFKQATEGPCKQPKPSFWDVVRKAKWDAWKKLGNMGKEEAMEAYVE 160 (394)
Q Consensus 81 dleekFeaAw~~VK~L~kega~~ps~e~~L~LYalYKQAT~Gdc~~prPg~~D~~~raKwdAW~~lggMS~eEAm~~YVe 160 (394)
+++++|+.|++.++.++++|+++|++|++|+|||||||||+|||+.++||+||++||+||+||++++|||++|||++||+
T Consensus 7 ~l~~~F~~A~~~vk~l~~~g~~~ps~e~~L~LYaLyKQAt~Gd~~~~~Pg~~d~~~~aKw~AW~~l~gms~eeA~~~YI~ 86 (106)
T 2wh5_A 7 DCQKQFQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQATMGPCLVPRPGFWDPIGRYKWDAWNSLGKMSREEAMSAYIT 86 (106)
T ss_dssp --CHHHHHHHHHHHHSCSSCSCCCCHHHHHHHHHHHHHHHHCSCCSCCCCTTCHHHHHHHHHHHTTTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccccCCCCCCHHHHHHHHHHHhhhccCCCCCCCCCcccHHHHHHHHHHHHhcCCCHHHHHHHHHH
Confidence 46689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcC
Q psy5114 161 ELKKIVETMA 170 (394)
Q Consensus 161 ~v~~ii~~~~ 170 (394)
+++++++++.
T Consensus 87 ~v~~l~~k~~ 96 (106)
T 2wh5_A 87 EMKLVAQKVI 96 (106)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhh
Confidence 9997666543
No 6
>1st7_A ACBP, acyl-COA-binding protein; four helix bundle, transport protein; NMR {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.3e-29 Score=206.87 Aligned_cols=85 Identities=27% Similarity=0.638 Sum_probs=81.4
Q ss_pred hHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhhhhcccCCCCCCCCCcccHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Q psy5114 82 TEEKFHAAVNVIRNLPKNGAYQPSNDLMLRFYSYFKQATEGPCKQPKPSFWDVVRKAKWDAWKKLGNMGKEEAMEAYVEE 161 (394)
Q Consensus 82 leekFeaAw~~VK~L~kega~~ps~e~~L~LYalYKQAT~Gdc~~prPg~~D~~~raKwdAW~~lggMS~eEAm~~YVe~ 161 (394)
++++|+.|++.|+.++. .|++|++|+|||||||||+|||+.++||+||++||+||+||++++|||++|||++||++
T Consensus 1 l~~~F~~A~~~v~~l~~----~~~~~~~L~lYalyKQAt~Gd~~~~~Pg~~d~~~raKw~AW~~l~gms~eeA~~~YI~~ 76 (86)
T 1st7_A 1 VSQLFEEKAKAVNELPT----KPSTDELLELYALYKQATVGDNDKEKPGIFNMKDRYKWEAWENLKGKSQEDAEKEYIAL 76 (86)
T ss_dssp CHHHHHHHHHHHTSCSS----CCCHHHHHHHHHHHHHHHHCSCCCCCCCSSCHHHHHHHHHHHTTTTTHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHccC----CcCHHHHHHHHHHHHHHhhCCCCCCCCCccCHHHHHHHHHHHHcCCCCHHHHHHHHHHH
Confidence 46899999999999986 59999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcC
Q psy5114 162 LKKIVETMA 170 (394)
Q Consensus 162 v~~ii~~~~ 170 (394)
|++++++|.
T Consensus 77 v~~l~~~~~ 85 (86)
T 1st7_A 77 VDQLIAKYS 85 (86)
T ss_dssp HHHHHHHHC
T ss_pred HHHHhhhhc
Confidence 999999875
No 7
>2cqu_A Peroxisomal D3,D2-enoyl-COA isomerase; acyl-COA binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.96 E-value=2.7e-29 Score=215.53 Aligned_cols=95 Identities=37% Similarity=0.771 Sum_probs=90.2
Q ss_pred ccCCCCCCChHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhhhhcccCCCCCCCCCcccHHHHHHHHHHHhcCCCCHH
Q psy5114 73 DQTTPAKMTTEEKFHAAVNVIRNLPKNGAYQPSNDLMLRFYSYFKQATEGPCKQPKPSFWDVVRKAKWDAWKKLGNMGKE 152 (394)
Q Consensus 73 ~~~~PgmmdleekFeaAw~~VK~L~kega~~ps~e~~L~LYalYKQAT~Gdc~~prPg~~D~~~raKwdAW~~lggMS~e 152 (394)
+...|+|++++++|+.|++.|+.+++ .|++|++|+|||||||||+|||+.++||+||+++|+||+||++++|||++
T Consensus 7 ~~~~~~m~~~~~~F~~A~~~vk~l~~----~p~~~~~L~LYaLyKQAt~Gd~~~~~Pg~~d~~graKw~AW~~l~gms~e 82 (116)
T 2cqu_A 7 GMNRTAMRASQKDFENSMNQVKLLKK----DPGNEVKLKLYALYKQATEGPCNMPKPGVFDLINKAKWDAWNALGSLPKE 82 (116)
T ss_dssp CCCCSSCCCCHHHHHHHHHHHHHCCS----CCCHHHHHHHHHHHTTTTTCSCCSCCCCTTCHHHHHHHHHHHHHCSCCHH
T ss_pred ccccccHHHHHHHHHHHHHHHHHccC----CCCHHHHHHHHHHHHHHhcCCCCCCCCCcccHHHHHHHHHHHHhcCCCHH
Confidence 47789999999999999999999997 48999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCC
Q psy5114 153 EAMEAYVEELKKIVETMAY 171 (394)
Q Consensus 153 EAm~~YVe~v~~ii~~~~~ 171 (394)
|||++||++|+++++.|.-
T Consensus 83 eAm~~YI~lv~~l~~~~~~ 101 (116)
T 2cqu_A 83 AARQNYVDLVSSLSPSLES 101 (116)
T ss_dssp HHHHHHHHHHHHHCSCCCC
T ss_pred HHHHHHHHHHHHHcccccc
Confidence 9999999999999988755
No 8
>2cb8_A Acyl-COA-binding protein; acyl-coenzyme A binding protein, fatty acid, acetylation, alternative splicing, lipid-binding, transport; HET: MYA; 1.4A {Homo sapiens} PDB: 2fj9_A 1aca_A* 1hb6_A 1hb8_A 1nti_A 1nvl_A* 2abd_A 2fdq_A
Probab=99.96 E-value=4e-29 Score=204.47 Aligned_cols=84 Identities=36% Similarity=0.687 Sum_probs=81.3
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhhhhcccCCCCCCCCCcccHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Q psy5114 83 EEKFHAAVNVIRNLPKNGAYQPSNDLMLRFYSYFKQATEGPCKQPKPSFWDVVRKAKWDAWKKLGNMGKEEAMEAYVEEL 162 (394)
Q Consensus 83 eekFeaAw~~VK~L~kega~~ps~e~~L~LYalYKQAT~Gdc~~prPg~~D~~~raKwdAW~~lggMS~eEAm~~YVe~v 162 (394)
+++|+.|++.|+.++. +|++|++|+|||||||||+|||+.++||+||++||+||+||++++|||++|||++||++|
T Consensus 3 ~~~F~~A~~~vk~l~~----~~~~~~~L~lYalyKQAt~Gd~~~~~Pg~~d~~~~aKw~AW~~l~gms~eeA~~~Yi~~v 78 (87)
T 2cb8_A 3 QAEFEKAAEEVRHLKT----KPSDEEMLFIYGHYKQATVGDINTERPGMLDFTGKAKWDAWNELKGTSKEDAMKAYINKV 78 (87)
T ss_dssp HHHHHHHHHHGGGCSS----CCCHHHHHHHHHHHHHHHTCSCCSCCCCTTCHHHHHHHHHHHTTTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccC----CcCHHHHHHHHHHHHhhhhCCCCCCCCCcccHHHHHHHHHHHHcCCCCHHHHHHHHHHHH
Confidence 6899999999999986 599999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcC
Q psy5114 163 KKIVETMA 170 (394)
Q Consensus 163 ~~ii~~~~ 170 (394)
++++++|+
T Consensus 79 ~~l~~~~~ 86 (87)
T 2cb8_A 79 EELKKKYG 86 (87)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHhC
Confidence 99999986
No 9
>2cop_A Acyl-coenzyme A binding domain containing 6; acyl COA binding protein, COA binding protein, lipid binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.95 E-value=1.8e-28 Score=208.27 Aligned_cols=88 Identities=34% Similarity=0.624 Sum_probs=83.5
Q ss_pred CChHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhhhhcccCCCCCCCCCcccHHHHHHHHHHHhcCCCCHHHHHHHHH
Q psy5114 80 MTTEEKFHAAVNVIRNLPKNGAYQPSNDLMLRFYSYFKQATEGPCKQPKPSFWDVVRKAKWDAWKKLGNMGKEEAMEAYV 159 (394)
Q Consensus 80 mdleekFeaAw~~VK~L~kega~~ps~e~~L~LYalYKQAT~Gdc~~prPg~~D~~~raKwdAW~~lggMS~eEAm~~YV 159 (394)
-+++++|+.|++.|+.++. .|++|++|+|||||||||+|||+.++||+||+++|+||+||++++|||++|||++||
T Consensus 6 ~~l~~~F~~A~~~vk~l~~----~p~~~~~L~LYaLyKQAt~Gd~~~~~Pg~~d~~~raKw~AW~~l~gms~eeAm~~YI 81 (109)
T 2cop_A 6 SGLAELFEKAAAHLQGLIQ----VASREQLLYLYARYKQVKVGNCNTPKPSFFDFEGKQKWEAWKALGDSSPSQAMQEYI 81 (109)
T ss_dssp CCSHHHHHHHHHHHTTSTT----TSCHHHHHHHHHHHHHHHTCSCCSCCCCSSCHHHHHHHHHHHSCTTCCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHccc----CCCHHHHHHHHHHHHHhhcCCCCCCCCCccCHHHHHHHHHHHHhcCCCHHHHHHHHH
Confidence 3678999999999999986 599999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCC
Q psy5114 160 EELKKIVETMAY 171 (394)
Q Consensus 160 e~v~~ii~~~~~ 171 (394)
++|+++++.|..
T Consensus 82 ~lv~~l~~~~~~ 93 (109)
T 2cop_A 82 AVVKKLDPGWNP 93 (109)
T ss_dssp HHHHHHCTTCCC
T ss_pred HHHHHHhhhhcc
Confidence 999999998855
No 10
>2lbb_A Acyl COA binding protein; protein binding, structural genomi seattle structural genomics center for infectious disease,; NMR {Babesia bovis}
Probab=99.95 E-value=1.9e-28 Score=203.96 Aligned_cols=84 Identities=42% Similarity=0.721 Sum_probs=80.0
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhhhhcccCCCCCCCCCcccHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Q psy5114 84 EKFHAAVNVIRNLPKNGAYQPSNDLMLRFYSYFKQATEGPCKQPKPSFWDVVRKAKWDAWKKLGNMGKEEAMEAYVEELK 163 (394)
Q Consensus 84 ekFeaAw~~VK~L~kega~~ps~e~~L~LYalYKQAT~Gdc~~prPg~~D~~~raKwdAW~~lggMS~eEAm~~YVe~v~ 163 (394)
++|+.|++.|+++++ ..|++|++|+|||||||||+|||+.++||+||++||+||+||++++|||++|||++||++|+
T Consensus 12 ~~F~~A~~~vk~l~~---~~ps~~~~L~LYaLyKQAt~Gd~~~~~Pg~~d~~graKw~AW~~l~gmS~eeAm~~YI~lv~ 88 (96)
T 2lbb_A 12 DDFDAAVKYVSNTTT---MMASNDDKLCFYKYYKQATVGDCNKPKPGMLQLQEKYKWEAWNALRGMSTESAKEAYVKLLD 88 (96)
T ss_dssp STHHHHHHHHHHCCC---SCCCTTTTTHHHHHHHHTTTSSCCCCCCCSSCSHHHHHHHHHHHTTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCC---CCCCHHHHHHHHHHHHHHhcCCCCCCCCCcccHHhHHHHHHHHHhcCCCHHHHHHHHHHHHH
Confidence 579999999999995 26999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcC
Q psy5114 164 KIVETMA 170 (394)
Q Consensus 164 ~ii~~~~ 170 (394)
+++++|.
T Consensus 89 ~l~~~~~ 95 (96)
T 2lbb_A 89 TLAPSWR 95 (96)
T ss_dssp HHCGGGT
T ss_pred HHhchhc
Confidence 9999874
No 11
>3fp5_A Acyl-COA binding protein; ACBP, cacao disease, fatty acid metabolism, lipid binding protein; HET: MES; 1.61A {Moniliophthora perniciosa} SCOP: a.11.1.0
Probab=99.80 E-value=1.4e-20 Score=159.14 Aligned_cols=72 Identities=31% Similarity=0.551 Sum_probs=68.4
Q ss_pred CChHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHhhhhhhhcccccccccccCCCCCCChHHHHH-HHHHHHhcCCCC
Q psy5114 23 MTTEEKFHAAVNVIRNLPKNGAYQPSNDLMLRFYSYFKQVKIQNTRLFIEDQTTPAKMTTEEKFH-AAVNVIRNLPKN 99 (394)
Q Consensus 23 m~lee~F~~Av~~vk~L~k~g~~~psn~~~L~~YalYKQAT~Gdcn~~~~~~~~PgmmdleekFe-aAw~~VK~L~ke 99 (394)
|+++++|++|+++|++|+++|+++|+++++|+|||||||||+|||+ ..+||++|+.++++ +||+.+++++++
T Consensus 2 ~~~~~~F~~A~~~vk~l~~~g~~~ps~~~~L~LYalyKQAt~Gd~~-----~~~Pg~~d~~~raKw~AW~~l~gmS~e 74 (106)
T 3fp5_A 2 HMSKAKFDKAVEIVQSLPKDGPIKPTQDEQLYFYKYFKQATVGDVN-----ISRPGLMDFTGKAKWDAWKSVEGTSKE 74 (106)
T ss_dssp CCCHHHHHHHHHHHHHCCSSSSSCCCHHHHHHHHHHHHHHHTCSCC-----SCCCCTTCHHHHHHHHHHHTTTTCCHH
T ss_pred CchHHHHHHHHHHHHhcccccCCCCCHHHHHHHHHHHHHHhcCCCC-----CCCCCccchHHHHHHHHHHHccCCCHH
Confidence 7889999999999999999999999999999999999999999999 88999999999985 999999998864
No 12
>3epy_A Acyl-COA-binding domain-containing protein 7; acyl-COA binding protein, fatty acid, lipid metabolism, structural genomics; HET: COA PLM; 2.00A {Homo sapiens} SCOP: a.11.1.1
Probab=99.79 E-value=3.3e-20 Score=152.34 Aligned_cols=70 Identities=21% Similarity=0.380 Sum_probs=65.0
Q ss_pred CChHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHhhhhhhhcccccccccccCCCCCCChHHHHH-HHHHHHhcCCCCCC
Q psy5114 23 MTTEEKFHAAVNVIRNLPKNGAYQPSNDLMLRFYSYFKQVKIQNTRLFIEDQTTPAKMTTEEKFH-AAVNVIRNLPKNGA 101 (394)
Q Consensus 23 m~lee~F~~Av~~vk~L~k~g~~~psn~~~L~~YalYKQAT~Gdcn~~~~~~~~PgmmdleekFe-aAw~~VK~L~kega 101 (394)
|+|+++|++|+++|++|+.. |+++++|+|||||||||+|||+ +.+||++|+.++++ +||+.+++++++++
T Consensus 2 m~L~~~F~~A~~~vk~l~~~----p~~~~~L~lYalyKQAt~Gd~~-----~~~Pg~~d~~~~aKw~AW~~l~g~s~eeA 72 (89)
T 3epy_A 2 MALQADFDRAAEDVRKLKAR----PDDGELKELYGLYKQAIVGDIN-----IACPGMLDLKGKAKWEAWNLKKGLSTEDA 72 (89)
T ss_dssp CHHHHHHHHHHHHGGGCSSC----CCHHHHHHHHHHHHHHHTCSCC-----SCCTTTTCHHHHHHHHHHHTTTTCCHHHH
T ss_pred CcHHHHHHHHHHHHHHcCCC----cCHHHHHHHHHHHHHHhhCCCC-----CCCCcccchHHHHHHHHHHHhhCCCHHHH
Confidence 78999999999999999876 9999999999999999999999 88999999999985 99999999887543
No 13
>2wh5_A Acyl-COA-binding domain-containing protein 4; alternative splicing, fatty acid metabolism, lipid transport, lipid binding protein; HET: STE ST9 COA; 2.60A {Homo sapiens}
Probab=99.77 E-value=9.5e-20 Score=154.05 Aligned_cols=73 Identities=38% Similarity=0.663 Sum_probs=66.6
Q ss_pred ChHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHhhhhhhhcccccccccccCCCCCCChHHHHH-HHHHHHhcCCCCCC
Q psy5114 24 TTEEKFHAAVNVIRNLPKNGAYQPSNDLMLRFYSYFKQVKIQNTRLFIEDQTTPAKMTTEEKFH-AAVNVIRNLPKNGA 101 (394)
Q Consensus 24 ~lee~F~~Av~~vk~L~k~g~~~psn~~~L~~YalYKQAT~Gdcn~~~~~~~~PgmmdleekFe-aAw~~VK~L~kega 101 (394)
.++++|++|+++|++|+++|+++|+++++|+|||||||||+|||+ ..+||++|+.++++ +||+.+++++++++
T Consensus 7 ~l~~~F~~A~~~vk~l~~~g~~~ps~e~~L~LYaLyKQAt~Gd~~-----~~~Pg~~d~~~~aKw~AW~~l~gms~eeA 80 (106)
T 2wh5_A 7 DCQKQFQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQATMGPCL-----VPRPGFWDPIGRYKWDAWNSLGKMSREEA 80 (106)
T ss_dssp --CHHHHHHHHHHHHSCSSCSCCCCHHHHHHHHHHHHHHHHCSCC-----SCCCCTTCHHHHHHHHHHHTTTTCCHHHH
T ss_pred HHHHHHHHHHHHHHhccccCCCCCCHHHHHHHHHHHhhhccCCCC-----CCCCCcccHHHHHHHHHHHHhcCCCHHHH
Confidence 467999999999999999999999999999999999999999999 89999999999984 99999999987543
No 14
>3flv_A Acyl-COA-binding domain-containing protein 5; lipid binding, structural genomics, struct genomics consortium, SGC, lipid-binding, membrane; HET: STE COA; 1.70A {Homo sapiens}
Probab=99.77 E-value=5.5e-20 Score=158.30 Aligned_cols=71 Identities=35% Similarity=0.680 Sum_probs=67.3
Q ss_pred ChHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHhhhhhhhcccccccccccCCCCCCChHHHHH-HHHHHHhcCCCC
Q psy5114 24 TTEEKFHAAVNVIRNLPKNGAYQPSNDLMLRFYSYFKQVKIQNTRLFIEDQTTPAKMTTEEKFH-AAVNVIRNLPKN 99 (394)
Q Consensus 24 ~lee~F~~Av~~vk~L~k~g~~~psn~~~L~~YalYKQAT~Gdcn~~~~~~~~PgmmdleekFe-aAw~~VK~L~ke 99 (394)
.|+++|++|+++|++|+++|+++|+++++|+|||||||||+|||+ ..+||++|+.++++ +||+.+++++++
T Consensus 23 dLe~~F~~A~~~Vk~l~~~g~~~ps~d~~L~LYaLyKQAT~Gd~~-----~~~Pg~~d~~graKw~AW~~l~gmS~e 94 (119)
T 3flv_A 23 MHETRFEAAVKVIQSLPKNGSFQPTNEMMLKFYSFYKQATEGPCK-----LSRPGFWDPIGRYKWDAWSSLGDMTKE 94 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHSSCCCCHHHHHHHHHHHHHHHTCSCC-----SCCCCTTCHHHHHHHHHHHHTTTCCHH
T ss_pred HHHHHHHHHHHHHHhCcccCCCCCCHHHHHHHHHHHHHHhcCCCC-----CCCCCccCHHHHHHHHHHHHccCCCHH
Confidence 589999999999999999999999999999999999999999999 89999999999985 999999998865
No 15
>1hbk_A ACBP, acyl-COA binding protein; fatty acid metabolism; HET: COA MYR; 2.0A {Plasmodium falciparum} SCOP: a.11.1.1
Probab=99.75 E-value=3.1e-19 Score=146.35 Aligned_cols=69 Identities=26% Similarity=0.453 Sum_probs=62.7
Q ss_pred hHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHhhhhhhhcccccccccccCCCCCCChHHHHH-HHHHHHhcCCCCC
Q psy5114 25 TEEKFHAAVNVIRNLPKNGAYQPSNDLMLRFYSYFKQVKIQNTRLFIEDQTTPAKMTTEEKFH-AAVNVIRNLPKNG 100 (394)
Q Consensus 25 lee~F~~Av~~vk~L~k~g~~~psn~~~L~~YalYKQAT~Gdcn~~~~~~~~PgmmdleekFe-aAw~~VK~L~keg 100 (394)
|+++|++|+++|+++++ +.+|+++++|+|||||||||+|||+ +.+||++|+.++++ +||+.++++++++
T Consensus 2 l~~~F~~A~~~v~~l~~--~~~~~~~~~L~LYalyKQAt~Gd~~-----~~~Pg~~d~~~~aKw~AW~~l~gms~ee 71 (89)
T 1hbk_A 2 MAQVFEECVSFINGLPR--TINLPNELKLDLYKYYKQSTIGNCN-----IKEPSAHKYIDRKKYEAWKSVENLNRED 71 (89)
T ss_dssp HHHHHHHHHHHHHHSCT--TCCCCHHHHHHHHHHHHHHHTCSCC-----SCCCCTTSHHHHHHHHHHHHTTTCCHHH
T ss_pred hHHHHHHHHHHHHhcCC--cCCCCHHHHHHHHHHHHHhhcCCCC-----CCCCCccCHHhHHHHHHHHHhcCCCHHH
Confidence 67999999999999985 3459999999999999999999999 89999999999985 9999999988753
No 16
>1st7_A ACBP, acyl-COA-binding protein; four helix bundle, transport protein; NMR {Saccharomyces cerevisiae}
Probab=99.75 E-value=2.7e-19 Score=145.85 Aligned_cols=67 Identities=18% Similarity=0.484 Sum_probs=62.3
Q ss_pred hHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHhhhhhhhcccccccccccCCCCCCChHHHHH-HHHHHHhcCCCCC
Q psy5114 25 TEEKFHAAVNVIRNLPKNGAYQPSNDLMLRFYSYFKQVKIQNTRLFIEDQTTPAKMTTEEKFH-AAVNVIRNLPKNG 100 (394)
Q Consensus 25 lee~F~~Av~~vk~L~k~g~~~psn~~~L~~YalYKQAT~Gdcn~~~~~~~~PgmmdleekFe-aAw~~VK~L~keg 100 (394)
|+++|++|+++|++|+.. |+++++|+|||||||||+|||+ +.+||++|+.++++ +||+.++++++++
T Consensus 1 l~~~F~~A~~~v~~l~~~----~~~~~~L~lYalyKQAt~Gd~~-----~~~Pg~~d~~~raKw~AW~~l~gms~ee 68 (86)
T 1st7_A 1 VSQLFEEKAKAVNELPTK----PSTDELLELYALYKQATVGDND-----KEKPGIFNMKDRYKWEAWENLKGKSQED 68 (86)
T ss_dssp CHHHHHHHHHHHTSCSSC----CCHHHHHHHHHHHHHHHHCSCC-----CCCCCSSCHHHHHHHHHHHTTTTTHHHH
T ss_pred CHHHHHHHHHHHHHccCC----cCHHHHHHHHHHHHHHhhCCCC-----CCCCCccCHHHHHHHHHHHHcCCCCHHH
Confidence 578999999999999976 9999999999999999999999 89999999999985 9999999988754
No 17
>2cqu_A Peroxisomal D3,D2-enoyl-COA isomerase; acyl-COA binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.75 E-value=5.1e-19 Score=151.74 Aligned_cols=89 Identities=20% Similarity=0.368 Sum_probs=74.0
Q ss_pred CCCCCCCcC-ChHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHhhhhhhhcccccccccccCCCCCCChHHHHH-HHHHH
Q psy5114 15 KDQTTPAKM-TTEEKFHAAVNVIRNLPKNGAYQPSNDLMLRFYSYFKQVKIQNTRLFIEDQTTPAKMTTEEKFH-AAVNV 92 (394)
Q Consensus 15 ~~~~~~~~m-~lee~F~~Av~~vk~L~k~g~~~psn~~~L~~YalYKQAT~Gdcn~~~~~~~~PgmmdleekFe-aAw~~ 92 (394)
..|++.+.| .++++|++|++.|++|+++ |+++++|+||+||||||+|||+ ..+||++|+.++++ +||+.
T Consensus 5 ~~~~~~~~m~~~~~~F~~A~~~vk~l~~~----p~~~~~L~LYaLyKQAt~Gd~~-----~~~Pg~~d~~graKw~AW~~ 75 (116)
T 2cqu_A 5 SSGMNRTAMRASQKDFENSMNQVKLLKKD----PGNEVKLKLYALYKQATEGPCN-----MPKPGVFDLINKAKWDAWNA 75 (116)
T ss_dssp SSCCCCSSCCCCHHHHHHHHHHHHHCCSC----CCHHHHHHHHHHHTTTTTCSCC-----SCCCCTTCHHHHHHHHHHHH
T ss_pred ccccccccHHHHHHHHHHHHHHHHHccCC----CCHHHHHHHHHHHHHHhcCCCC-----CCCCCcccHHHHHHHHHHHH
Confidence 345444456 5899999999999999987 9999999999999999999999 89999999999985 99999
Q ss_pred HhcCCCCCCCCCCHHHHHHHHHhhhhc
Q psy5114 93 IRNLPKNGAYQPSNDLMLRFYSYFKQA 119 (394)
Q Consensus 93 VK~L~kega~~ps~e~~L~LYalYKQA 119 (394)
+++++++ |.|.++-.+..+.
T Consensus 76 l~gms~e-------eAm~~YI~lv~~l 95 (116)
T 2cqu_A 76 LGSLPKE-------AARQNYVDLVSSL 95 (116)
T ss_dssp HCSCCHH-------HHHHHHHHHHHHH
T ss_pred hcCCCHH-------HHHHHHHHHHHHH
Confidence 9999875 3444444554444
No 18
>2cb8_A Acyl-COA-binding protein; acyl-coenzyme A binding protein, fatty acid, acetylation, alternative splicing, lipid-binding, transport; HET: MYA; 1.4A {Homo sapiens} PDB: 2fj9_A 1aca_A* 1hb6_A 1hb8_A 1nti_A 1nvl_A* 2abd_A 2fdq_A
Probab=99.74 E-value=6.8e-19 Score=143.86 Aligned_cols=67 Identities=24% Similarity=0.417 Sum_probs=62.3
Q ss_pred hHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHhhhhhhhcccccccccccCCCCCCChHHHHH-HHHHHHhcCCCCC
Q psy5114 25 TEEKFHAAVNVIRNLPKNGAYQPSNDLMLRFYSYFKQVKIQNTRLFIEDQTTPAKMTTEEKFH-AAVNVIRNLPKNG 100 (394)
Q Consensus 25 lee~F~~Av~~vk~L~k~g~~~psn~~~L~~YalYKQAT~Gdcn~~~~~~~~PgmmdleekFe-aAw~~VK~L~keg 100 (394)
++++|++|++.|++|+.. |+++++|+|||||||||+|||+ +.+||++|+.++++ +||+.++++++++
T Consensus 2 ~~~~F~~A~~~vk~l~~~----~~~~~~L~lYalyKQAt~Gd~~-----~~~Pg~~d~~~~aKw~AW~~l~gms~ee 69 (87)
T 2cb8_A 2 SQAEFEKAAEEVRHLKTK----PSDEEMLFIYGHYKQATVGDIN-----TERPGMLDFTGKAKWDAWNELKGTSKED 69 (87)
T ss_dssp CHHHHHHHHHHGGGCSSC----CCHHHHHHHHHHHHHHHTCSCC-----SCCCCTTCHHHHHHHHHHHTTTTCCHHH
T ss_pred cHHHHHHHHHHHHHccCC----cCHHHHHHHHHHHHhhhhCCCC-----CCCCCcccHHHHHHHHHHHHcCCCCHHH
Confidence 488999999999999976 9999999999999999999999 89999999999985 9999999988753
No 19
>2cop_A Acyl-coenzyme A binding domain containing 6; acyl COA binding protein, COA binding protein, lipid binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.72 E-value=1.6e-18 Score=147.19 Aligned_cols=68 Identities=24% Similarity=0.317 Sum_probs=63.2
Q ss_pred ChHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHhhhhhhhcccccccccccCCCCCCChHHHHH-HHHHHHhcCCCCC
Q psy5114 24 TTEEKFHAAVNVIRNLPKNGAYQPSNDLMLRFYSYFKQVKIQNTRLFIEDQTTPAKMTTEEKFH-AAVNVIRNLPKNG 100 (394)
Q Consensus 24 ~lee~F~~Av~~vk~L~k~g~~~psn~~~L~~YalYKQAT~Gdcn~~~~~~~~PgmmdleekFe-aAw~~VK~L~keg 100 (394)
.++++|++|+++|++|+.. |+++++|+||+||||||+|||+ +.+||++|+.++++ +||+.++++++++
T Consensus 7 ~l~~~F~~A~~~vk~l~~~----p~~~~~L~LYaLyKQAt~Gd~~-----~~~Pg~~d~~~raKw~AW~~l~gms~ee 75 (109)
T 2cop_A 7 GLAELFEKAAAHLQGLIQV----ASREQLLYLYARYKQVKVGNCN-----TPKPSFFDFEGKQKWEAWKALGDSSPSQ 75 (109)
T ss_dssp CSHHHHHHHHHHHTTSTTT----SCHHHHHHHHHHHHHHHTCSCC-----SCCCCSSCHHHHHHHHHHHSCTTCCHHH
T ss_pred HHHHHHHHHHHHHHHcccC----CCHHHHHHHHHHHHHhhcCCCC-----CCCCCccCHHHHHHHHHHHHhcCCCHHH
Confidence 4789999999999999876 9999999999999999999999 88999999999984 9999999998753
No 20
>2lbb_A Acyl COA binding protein; protein binding, structural genomi seattle structural genomics center for infectious disease,; NMR {Babesia bovis}
Probab=99.71 E-value=7.6e-19 Score=146.14 Aligned_cols=71 Identities=30% Similarity=0.537 Sum_probs=61.8
Q ss_pred CcCChHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHhhhhhhhcccccccccccCCCCCCChHHHHH-HHHHHHhcCCCC
Q psy5114 21 AKMTTEEKFHAAVNVIRNLPKNGAYQPSNDLMLRFYSYFKQVKIQNTRLFIEDQTTPAKMTTEEKFH-AAVNVIRNLPKN 99 (394)
Q Consensus 21 ~~m~lee~F~~Av~~vk~L~k~g~~~psn~~~L~~YalYKQAT~Gdcn~~~~~~~~PgmmdleekFe-aAw~~VK~L~ke 99 (394)
+.|+ .++|++|++.|++|++ .+|+++++|+|||||||||+|||+ +.+||++|+.++++ +||+.+++++++
T Consensus 7 ~~~~-~~~F~~A~~~vk~l~~---~~ps~~~~L~LYaLyKQAt~Gd~~-----~~~Pg~~d~~graKw~AW~~l~gmS~e 77 (96)
T 2lbb_A 7 HHMS-ADDFDAAVKYVSNTTT---MMASNDDKLCFYKYYKQATVGDCN-----KPKPGMLQLQEKYKWEAWNALRGMSTE 77 (96)
T ss_dssp --CC-SSTHHHHHHHHHHCCC---SCCCTTTTTHHHHHHHHTTTSSCC-----CCCCCSSCSHHHHHHHHHHHTTTCCHH
T ss_pred cccC-HHHHHHHHHHHHhCCC---CCCCHHHHHHHHHHHHHHhcCCCC-----CCCCCcccHHhHHHHHHHHHhcCCCHH
Confidence 3454 4689999999999994 239999999999999999999999 89999999999985 999999998875
Q ss_pred C
Q psy5114 100 G 100 (394)
Q Consensus 100 g 100 (394)
+
T Consensus 78 e 78 (96)
T 2lbb_A 78 S 78 (96)
T ss_dssp H
T ss_pred H
Confidence 3
No 21
>1mix_A Talin; focal adhesion, integrin binding, FERM domain, cytoskeleton, structural protein; 1.75A {Gallus gallus} SCOP: a.11.2.1 b.55.1.5 PDB: 1miz_B 1mk7_B 1mk9_B 1y19_B 3g9w_A 2hrj_A 2g35_A* 2k00_A 2h7d_A* 2h7e_A* 2kgx_B
Probab=97.82 E-value=3.7e-05 Score=69.17 Aligned_cols=71 Identities=30% Similarity=0.388 Sum_probs=58.2
Q ss_pred CCCCCCHHHHHHHHHhhhhcccCCCCCC--CCCcccHH------------HHHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy5114 100 GAYQPSNDLMLRFYSYFKQATEGPCKQP--KPSFWDVV------------RKAKWDAWKKLGNMGKEEAMEAYVEELKKI 165 (394)
Q Consensus 100 ga~~ps~e~~L~LYalYKQAT~Gdc~~p--rPg~~D~~------------~raKwdAW~~lggMS~eEAm~~YVe~v~~i 165 (394)
|.+..+.|+.+.|.||..||..||++.. .|++++.. .+..+++|+++.|||++||+.+|++.+.++
T Consensus 32 g~~~~~~~~a~~Laal~~qa~~Gd~~~~~~~~~~~~~~~~lP~~~~~~~~~~~i~~~~~~~~g~s~~~A~~~yL~~~~~l 111 (206)
T 1mix_A 32 GSHPVSFDKACEFAGYQCQIQFGPHNEQKHKPGFLELKDFLPKEYIKQKGERKIFMAHKNCGNMSEIEAKVRYVKLARSL 111 (206)
T ss_dssp TSSCCCHHHHHHHHHHHHHHHHCSCCTTTSCTTCSCGGGTSCGGGSTTCCHHHHHHHHHHTTTCCHHHHHHHHHHHHHHS
T ss_pred CccccCHHHHHHHHHHhhhheecCCCcccccCCccchHhhCCHHHhhcccHHHHHHHHHHccCCCHHHHHHHHHHHHHhC
Confidence 4456889999999999999999999864 56665544 677899999999999999999999998654
Q ss_pred HHhcCC
Q psy5114 166 VETMAY 171 (394)
Q Consensus 166 i~~~~~ 171 (394)
+.|+.
T Consensus 112 -~~yG~ 116 (206)
T 1mix_A 112 -KTYGV 116 (206)
T ss_dssp -TTTTC
T ss_pred -cccCc
Confidence 55543
No 22
>4f7g_A Talin-1; alpha-helix bundle, integrin activation, cell adhesion; 2.05A {Mus musculus}
Probab=93.38 E-value=0.16 Score=46.39 Aligned_cols=70 Identities=27% Similarity=0.334 Sum_probs=50.3
Q ss_pred CCCCCCHHHHHHHHHhhhhcccCCCCCC--CCCccc-----------HHHHH-HHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy5114 100 GAYQPSNDLMLRFYSYFKQATEGPCKQP--KPSFWD-----------VVRKA-KWDAWKKLGNMGKEEAMEAYVEELKKI 165 (394)
Q Consensus 100 ga~~ps~e~~L~LYalYKQAT~Gdc~~p--rPg~~D-----------~~~ra-KwdAW~~lggMS~eEAm~~YVe~v~~i 165 (394)
|-+..+.|+.+.|=||--||..||++.. .+++.+ -..+. =.+.|++++|||++||+.+|++.+.++
T Consensus 43 G~~~~~~e~a~~LAal~~Qae~Gd~~~~~~~~~~~~l~~~lP~~~~~~~~~~~I~~~h~~~~g~s~~eA~~~yL~~~~~l 122 (222)
T 4f7g_A 43 GSHPVSFDKACEFAGFQCQIQFGPHNEQKHKAGFLDLKDFLPKEYVKQKGERKIFQAHKNCGQMSEIEAKVRYVKLARSL 122 (222)
T ss_dssp TSSCCCHHHHHHHHHHHHHHHHCSCCTTTSCSSCSCGGGTSCGGGGGGCCHHHHHHHHHTTTTCCHHHHHHHHHHHHHTS
T ss_pred CcccCCHHHHHHHHHHHHHHHHCCCCchhcccCccchhhccCHHHHhhhhHHHHHHHHHhccCCCHHHHHHHHHHHHhhc
Confidence 3345788899999999999999998753 333221 11112 257899999999999999999988643
Q ss_pred HHhcC
Q psy5114 166 VETMA 170 (394)
Q Consensus 166 i~~~~ 170 (394)
+.|+
T Consensus 123 -~~yG 126 (222)
T 4f7g_A 123 -KTYG 126 (222)
T ss_dssp -TTTT
T ss_pred -cccC
Confidence 4443
No 23
>3qij_A Protein 4.1; cytoskeleton, structural genomics, structural genomics conso SGC; 1.80A {Homo sapiens} PDB: 1gg3_A 3bin_A 2he7_A 2rq1_A
Probab=93.35 E-value=0.07 Score=51.11 Aligned_cols=71 Identities=17% Similarity=0.145 Sum_probs=52.8
Q ss_pred CCCCCCHHHHHHHHHhhhhcccCCCCCC--CCCcc----------cHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q psy5114 100 GAYQPSNDLMLRFYSYFKQATEGPCKQP--KPSFW----------DVVRKAKWDAWKKLGNMGKEEAMEAYVEELKKIVE 167 (394)
Q Consensus 100 ga~~ps~e~~L~LYalYKQAT~Gdc~~p--rPg~~----------D~~~raKwdAW~~lggMS~eEAm~~YVe~v~~ii~ 167 (394)
|-+..+.|+.+.|=||--||..||++.. .++++ +-..+.=-++|+++.|||++||+..|++.+++ ++
T Consensus 124 G~~~c~~e~a~~LAAl~~Qae~Gd~~~~~~~~~yl~~~~~~P~~~~~~~~~I~~~h~~~~g~s~~eA~~~yL~~a~~-l~ 202 (296)
T 3qij_A 124 GRLPCSFATLALLGSYTIQSELGDYDPELHGVDYVSDFKLAPNQTKELEEKVMELHKSYRSMTPAQADLEFLENAKK-LS 202 (296)
T ss_dssp TSSCCCHHHHHHHHHHHHHHHHCSCCHHHHTTCCCTTSCCSSSCCHHHHHHHHHHHHTCCSCCHHHHHHHHHHHHTT-ST
T ss_pred CCCCCCHHHHHHHHHHHHHHhcCCCCccccchhhCcHhhcCCcCHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHhc-cc
Confidence 4456789999999999999999998732 23322 11222234789999999999999999999876 45
Q ss_pred hcCC
Q psy5114 168 TMAY 171 (394)
Q Consensus 168 ~~~~ 171 (394)
.|+.
T Consensus 203 ~yG~ 206 (296)
T 3qij_A 203 MYGV 206 (296)
T ss_dssp TTTC
T ss_pred ccCc
Confidence 5554
No 24
>1ef1_A Moesin; membrane, FERM domain, tail domain, membrane protein; 1.90A {Homo sapiens} SCOP: a.11.2.1 b.55.1.5 d.15.1.4 PDB: 1sgh_A 1j19_A 2emt_A 2ems_A 2d10_A 2d11_A 2yvc_A 2d2q_A 2zpy_A 1gc7_A 1gc6_A 1ni2_A
Probab=92.60 E-value=0.2 Score=47.26 Aligned_cols=70 Identities=19% Similarity=0.273 Sum_probs=51.9
Q ss_pred CCCCCCHHHHHHHHHhhhhcccCCCCCC--CCCccc--------HHH-----HHHH-----HHHHhcCCCCHHHHHHHHH
Q psy5114 100 GAYQPSNDLMLRFYSYFKQATEGPCKQP--KPSFWD--------VVR-----KAKW-----DAWKKLGNMGKEEAMEAYV 159 (394)
Q Consensus 100 ga~~ps~e~~L~LYalYKQAT~Gdc~~p--rPg~~D--------~~~-----raKw-----dAW~~lggMS~eEAm~~YV 159 (394)
|-+..+.++...|=||--||..||++.. .+++++ +.. ...| ++|+++.|||++||+.+|+
T Consensus 110 g~~~~~~e~a~~Laal~~q~~~Gd~~~~~~~~~~l~~~~~lP~~~~~~~~~~~~~~~~~I~~~~~~~~g~s~~~A~~~yL 189 (294)
T 1ef1_A 110 DDIYCPPETAVLLASYAVQSKYGDFNKEVHKSGYLAGDKLLPQRVLEQHKLNKDQWEERIQVWHEEHRGMLREDAVLEYL 189 (294)
T ss_dssp TSSCCCHHHHHHHHHHHHHHHHCSCCTTTSCTTTTTTCCCSCHHHHHHBCCCHHHHHHHHHHHHHHTTTCCHHHHHHHHH
T ss_pred CcccCCHHHHHHHHHHHHHHHhCCCCccccChhhccccccCCHHHHhhcCCCHHHHHHHHHHHHHHccCCCHHHHHHHHH
Confidence 4456789999999999999999999754 344421 111 2234 7899999999999999999
Q ss_pred HHHHHHHHhcC
Q psy5114 160 EELKKIVETMA 170 (394)
Q Consensus 160 e~v~~ii~~~~ 170 (394)
+.+.+ ++.|+
T Consensus 190 ~~~~~-lp~yG 199 (294)
T 1ef1_A 190 KIAQD-LEMYG 199 (294)
T ss_dssp HHHTT-STTTT
T ss_pred HHHcc-cCccC
Confidence 99864 34443
No 25
>1h4r_A Merlin; FERM, neurofibromatosis, NF2, structural protein, cytoskeleton, anti-oncogene; 1.8A {Homo sapiens} SCOP: a.11.2.1 b.55.1.5 d.15.1.4 PDB: 1isn_A 3u8z_A
Probab=92.30 E-value=0.21 Score=47.68 Aligned_cols=70 Identities=17% Similarity=0.147 Sum_probs=51.7
Q ss_pred CCCCCCHHHHHHHHHhhhhcccCCCCCC--CCCccc--------H----------HHHHHHHHHHhcCCCCHHHHHHHHH
Q psy5114 100 GAYQPSNDLMLRFYSYFKQATEGPCKQP--KPSFWD--------V----------VRKAKWDAWKKLGNMGKEEAMEAYV 159 (394)
Q Consensus 100 ga~~ps~e~~L~LYalYKQAT~Gdc~~p--rPg~~D--------~----------~~raKwdAW~~lggMS~eEAm~~YV 159 (394)
|-+..+.|+...|=||--||..||++.. .|++++ + ..+.=-+.|+++.|||++||+.+|+
T Consensus 130 g~~~~~~e~a~~Laal~~Qa~~Gd~~~~~~~~~~~~~~~~lP~~~~~~~~~~~~~~~~~I~~~~~~~~g~s~~eA~~~yL 209 (314)
T 1h4r_A 130 EKIYCPPEASVLLASYAVQAKYGDYDPSVHKRGFLAQEELLPKRVINLYQMTPEMWEERITAWYAEHRGRARDEAEMEYL 209 (314)
T ss_dssp TSSCCCHHHHHHHHHHHHHHHHCSCCTTTSCTTTTTTCCCSCHHHHTTSCCCHHHHHHHHHHHHHTTTTCCHHHHHHHHH
T ss_pred CCccCCHHHHHHHHHHHHHHHHCCCCccccchhhcchhhcCCHHHHhhccCCHHHHHHHHHHHHHHcCCCCHHHHHHHHH
Confidence 4456789999999999999999999753 344321 1 1112237899999999999999999
Q ss_pred HHHHHHHHhcC
Q psy5114 160 EELKKIVETMA 170 (394)
Q Consensus 160 e~v~~ii~~~~ 170 (394)
+.+.+ ++.|+
T Consensus 210 ~~~~~-lp~yG 219 (314)
T 1h4r_A 210 KIAQD-LEMYG 219 (314)
T ss_dssp HHHTT-STTTT
T ss_pred HHHhc-cCccC
Confidence 99864 34443
No 26
>3ivf_A Talin-1; FERM domain, cell membrane, cell projection, cytoskeleton, M phosphoprotein, cell adhesion, structural protein; 1.94A {Mus musculus} PDB: 2kma_A 2kc1_A
Probab=90.68 E-value=0.54 Score=46.02 Aligned_cols=65 Identities=28% Similarity=0.341 Sum_probs=49.5
Q ss_pred CCCCCCHHHHHHHHHhhhhcccCCCCCC--CCCccc-----------HH-HHHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy5114 100 GAYQPSNDLMLRFYSYFKQATEGPCKQP--KPSFWD-----------VV-RKAKWDAWKKLGNMGKEEAMEAYVEELKK 164 (394)
Q Consensus 100 ga~~ps~e~~L~LYalYKQAT~Gdc~~p--rPg~~D-----------~~-~raKwdAW~~lggMS~eEAm~~YVe~v~~ 164 (394)
|-+..+.|+...|=||.-||..||++.. .+++.+ -. .+.=-++|+++.|||++||+.+|++.+.+
T Consensus 197 G~~~c~~e~a~~LAAl~~qae~Gd~~~~~~~~~~~~l~~~lP~~~~~~~~e~~I~~~~~~~~g~s~~eA~~~yL~~~~~ 275 (371)
T 3ivf_A 197 GSHPVSFDKACEFAGFQCQIQFGPHNEQKHKAGFLDLKDFLPKEYVKQKGERKIFQAHKNCGQMSEIEAKVRYVKLARS 275 (371)
T ss_dssp SSSCCCHHHHHHHHHHHHHHHHCSCCTTTSCTTCSCGGGTSCGGGTTSCHHHHHHHHHHHTTTCCHHHHHHHHHHHHHH
T ss_pred ceeecCHHHHHHHHHHHHHHHhCCCChhhcccchhcccccCCHHHhCchHHHHHHHHHHHccCCCHHHHHHHHHHHHhc
Confidence 4456889999999999999999999853 233211 01 12224789999999999999999999864
No 27
>2i1j_A Moesin; FERM, coiled-coil, C-ermad, ERM, radixin, ezrin, MER actin binding, masking, regulation, SELF-inhibition, cell A membrane protein; 2.10A {Spodoptera frugiperda} PDB: 2i1k_A 1e5w_A
Probab=89.40 E-value=0.45 Score=50.06 Aligned_cols=71 Identities=23% Similarity=0.395 Sum_probs=53.0
Q ss_pred CCCCCCHHHHHHHHHhhhhcccCCCCCC--CCCccc--------HHH-----HHHH-----HHHHhcCCCCHHHHHHHHH
Q psy5114 100 GAYQPSNDLMLRFYSYFKQATEGPCKQP--KPSFWD--------VVR-----KAKW-----DAWKKLGNMGKEEAMEAYV 159 (394)
Q Consensus 100 ga~~ps~e~~L~LYalYKQAT~Gdc~~p--rPg~~D--------~~~-----raKw-----dAW~~lggMS~eEAm~~YV 159 (394)
|-+..+.++...|=||--||..||++.. .|++++ +.. ...| ..|+++.|||+.+|+..|+
T Consensus 113 G~l~c~~e~a~~LAAL~lQae~GDy~~~~~~~~yl~~~~~lP~~vl~~~~~s~e~~~~~I~~~hk~l~G~s~~eA~~~yL 192 (575)
T 2i1j_A 113 DEIYCPPETSVLLASYAVQARHGDHNPAVHGPGFLANDRLLPQRVTDQHKMSREEWEQSITNWWQEHRGMLREDAMMEYL 192 (575)
T ss_dssp TSSCCCHHHHHHHHHHHHHHHHCSCCTTTCCTTTTTTCCCSCHHHHHTBCCCHHHHHHHHHHHHGGGTTCCHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHhcCCChhhcccccccccccCCHHHHhhcCCCHHHHHHHHHHHHHHccCCCHHHHHHHHH
Confidence 4566889999999999999999999853 345431 111 2234 6899999999999999999
Q ss_pred HHHHHHHHhcCC
Q psy5114 160 EELKKIVETMAY 171 (394)
Q Consensus 160 e~v~~ii~~~~~ 171 (394)
+.+.+ ++.|+.
T Consensus 193 ~~a~~-lp~YG~ 203 (575)
T 2i1j_A 193 KIAQD-LEMYGV 203 (575)
T ss_dssp HHHTT-STTTTC
T ss_pred HHHHh-ccccCC
Confidence 99874 355543
No 28
>3au4_A Myosin-X; protein-protein complex, motor protein cargo transportation, protein-apoptosis complex; 1.90A {Homo sapiens} PDB: 3au5_A 3pzd_A
Probab=82.48 E-value=1.7 Score=44.87 Aligned_cols=71 Identities=18% Similarity=0.272 Sum_probs=50.3
Q ss_pred CCCCCCHHHHHHHHHhhhhcccCCCCCCC--CCccc------HHH--------------------------HHH------
Q psy5114 100 GAYQPSNDLMLRFYSYFKQATEGPCKQPK--PSFWD------VVR--------------------------KAK------ 139 (394)
Q Consensus 100 ga~~ps~e~~L~LYalYKQAT~Gdc~~pr--Pg~~D------~~~--------------------------raK------ 139 (394)
|-+..+.++.+.|-||.-|+..||++... +..-+ +.. ...
T Consensus 335 G~~~~~~e~a~~LAAl~lQ~~~GD~~~~~~~~~l~~~lP~~~l~~~~~~~~k~~s~~~~~l~~~~~~~~~~~~~W~~~~~ 414 (555)
T 3au4_A 335 GHHPAPEENLQVLAALRLQYLQGDYTLHAAIPPLEEVYSLQRLKARISQSTKTFSFRTGSVVRQKVEEEQMLDMWIKEEV 414 (555)
T ss_dssp TCSCCCHHHHHHHHHHHHHHHHCSCCTTCCCCCGGGTSCCHHHHHHHHHTTCCEECCTTSCCEECCCCHHHHHHHTHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHcCCCccccchhhhhhhCCHHHhhhhhccccccccccccccccccchhhhhHHHHHHHHH
Confidence 45667899999999999999999987532 11100 001 011
Q ss_pred -------HHHHHhcCCCCHHHHHHHHHHHHHHHHHhcCC
Q psy5114 140 -------WDAWKKLGNMGKEEAMEAYVEELKKIVETMAY 171 (394)
Q Consensus 140 -------wdAW~~lggMS~eEAm~~YVe~v~~ii~~~~~ 171 (394)
-+.|+++.|||++||+.+|++.+.++ +.|+.
T Consensus 415 ~~~~~~I~~~~~~~~g~s~~eA~~~yL~~~~~l-p~yG~ 452 (555)
T 3au4_A 415 SSARASIIDKWRKFQGMNQEQAMAKYMALIKEW-PGYGS 452 (555)
T ss_dssp HHHHHHHHHHHHTTTTCCHHHHHHHHHHHHTTS-TTTTC
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhC-CCcCc
Confidence 36789999999999999999988655 44433
No 29
>2akf_A Coronin-1A; coiled coil, protein binding; 1.20A {Synthetic}
Probab=80.35 E-value=3.2 Score=27.26 Aligned_cols=28 Identities=29% Similarity=0.545 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHh
Q psy5114 321 LSDNIRNIQTDLASISERIKRLEVLSKL 348 (394)
Q Consensus 321 i~~tv~~Lq~dm~~V~~Rl~~LE~~~~~ 348 (394)
+-.-++.||.=+|.+|.||..||...++
T Consensus 4 lee~~r~l~~ivq~lq~r~drle~tvqa 31 (32)
T 2akf_A 4 LEEDVRNLNAIVQKLQERLDRLEETVQA 31 (32)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3456789999999999999999977664
No 30
>1mix_A Talin; focal adhesion, integrin binding, FERM domain, cytoskeleton, structural protein; 1.75A {Gallus gallus} SCOP: a.11.2.1 b.55.1.5 PDB: 1miz_B 1mk7_B 1mk9_B 1y19_B 3g9w_A 2hrj_A 2g35_A* 2k00_A 2h7d_A* 2h7e_A* 2kgx_B
Probab=77.09 E-value=4.5 Score=35.65 Aligned_cols=69 Identities=20% Similarity=0.178 Sum_probs=45.4
Q ss_pred CChHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHhhhhhhhcccccccccccCCCCCCCh-------------HHHHHHH
Q psy5114 23 MTTEEKFHAAVNVIRNLPKNGAYQPSNDLMLRFYSYFKQVKIQNTRLFIEDQTTPAKMTT-------------EEKFHAA 89 (394)
Q Consensus 23 m~lee~F~~Av~~vk~L~k~g~~~psn~~~L~~YalYKQAT~Gdcn~~~~~~~~Pgmmdl-------------eekFeaA 89 (394)
++..--|.++...|.+ |.+..+.++.+.|.||..||..||++.. ...++.+++ +.+-.++
T Consensus 16 ~~~~l~y~Q~~~dil~----g~~~~~~~~a~~Laal~~qa~~Gd~~~~---~~~~~~~~~~~~lP~~~~~~~~~~~i~~~ 88 (206)
T 1mix_A 16 VQLNLLYVQARDDILN----GSHPVSFDKACEFAGYQCQIQFGPHNEQ---KHKPGFLELKDFLPKEYIKQKGERKIFMA 88 (206)
T ss_dssp HHHHHHHHHHHHHHHT----TSSCCCHHHHHHHHHHHHHHHHCSCCTT---TSCTTCSCGGGTSCGGGSTTCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHC----CccccCHHHHHHHHHHhhhheecCCCcc---cccCCccchHhhCCHHHhhcccHHHHHHH
Confidence 3344567888887765 3344789999999999999999998721 112333332 3444567
Q ss_pred HHHHhcCCC
Q psy5114 90 VNVIRNLPK 98 (394)
Q Consensus 90 w~~VK~L~k 98 (394)
++.+++++.
T Consensus 89 ~~~~~g~s~ 97 (206)
T 1mix_A 89 HKNCGNMSE 97 (206)
T ss_dssp HHHTTTCCH
T ss_pred HHHccCCCH
Confidence 777766653
No 31
>4dxa_B KREV interaction trapped protein 1; GTPase, FERM, protein-protein interaction, GTP binding, CYTO protein binding; HET: GSP; 1.95A {Homo sapiens} PDB: 3u7d_A
Probab=76.35 E-value=1.8 Score=41.51 Aligned_cols=64 Identities=17% Similarity=0.282 Sum_probs=46.3
Q ss_pred CCCCCCHHHHHHHHHhhhhcccCCCCC--CCCCccc---H---------------HHHHHHHHHHhc---CCCCHHH--H
Q psy5114 100 GAYQPSNDLMLRFYSYFKQATEGPCKQ--PKPSFWD---V---------------VRKAKWDAWKKL---GNMGKEE--A 154 (394)
Q Consensus 100 ga~~ps~e~~L~LYalYKQAT~Gdc~~--prPg~~D---~---------------~~raKwdAW~~l---ggMS~eE--A 154 (394)
|-+..+.|+...|=||--||..||++. ..|++++ + ..+.=.++|+++ .|||+++ |
T Consensus 128 G~~~c~~e~a~~LAAl~~q~e~Gd~~~~~~~~~~l~~~~l~~~lP~~~~~~~~~~~~~~I~~~h~~~~~~~g~s~~~a~a 207 (322)
T 4dxa_B 128 GFYTAPDAKLITLASLLLQIVYGNYESKKHKQGFLNEENLKSIVPVTKLKSKAPHWTNRILHEYKNLSTSEGVSKEMHHL 207 (322)
T ss_dssp TCCCCCHHHHHHHHHHHHHHHHCSCCHHHHSSSCSCHHHHTTTSCTTTTTTTGGGSHHHHHHHHHHHHC--CCCCCHHHH
T ss_pred CcccCCHHHHHHHHHHHHHHHhCCCCcccccccccchhhhhhhCCHHHHhcCHHHHHHHHHHHHHhcccccCCChhHHHH
Confidence 445678999999999999999999863 2344432 1 012235789999 9999754 6
Q ss_pred HHHHHHHHH
Q psy5114 155 MEAYVEELK 163 (394)
Q Consensus 155 m~~YVe~v~ 163 (394)
+..|++.++
T Consensus 208 ~~~yL~~~~ 216 (322)
T 4dxa_B 208 QRMFLQNCW 216 (322)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999998886
No 32
>2al6_A Focal adhesion kinase 1; transferase; 2.35A {Gallus gallus} SCOP: a.11.2.1 b.55.1.5 d.15.1.4 PDB: 2j0m_A* 2aeh_A
Probab=74.00 E-value=3.2 Score=40.81 Aligned_cols=69 Identities=17% Similarity=0.300 Sum_probs=48.5
Q ss_pred CCCCHHHHHHHHHhhhhcccCCCCCCCC----C------------cc--cH--------HHHHHHHHHHhcCCCCHHHHH
Q psy5114 102 YQPSNDLMLRFYSYFKQATEGPCKQPKP----S------------FW--DV--------VRKAKWDAWKKLGNMGKEEAM 155 (394)
Q Consensus 102 ~~ps~e~~L~LYalYKQAT~Gdc~~prP----g------------~~--D~--------~~raKwdAW~~lggMS~eEAm 155 (394)
+..+.|+-+.|-+|=-|+..||++...+ + ++ ++ ..+.=...|+++.|||++|||
T Consensus 131 ~~~~~e~al~LAaL~~q~~~gD~~~~~~~~k~~~~~l~k~~~l~~flP~~~~~~~~~~~~~k~I~~~~k~~~g~s~~eAk 210 (375)
T 2al6_A 131 DQVDQEIALKLGCLEIRRSYGEMRGNALEKKSNYEVLEKDVGLRRFFPKSLLDSVKAKTLRKLIQQTFRQFANLNREESI 210 (375)
T ss_dssp TTSCHHHHHHHHHHHHHHHTTTSCTTGGGSHHHHHHHHHTTCGGGTSCHHHHHSSCHHHHHHHHHHHHHTTTTCCHHHHH
T ss_pred ccCCHHHHHHHHHHHHHHHhhhccchhhcccCCHHHhhhcccHHHhCCHHHHHHhChHHHHHHHHHHHHHhhCCCHHHHH
Confidence 3468899999999999999999863211 1 00 01 111114788899999999999
Q ss_pred HHHHHHHHHHHHhcCC
Q psy5114 156 EAYVEELKKIVETMAY 171 (394)
Q Consensus 156 ~~YVe~v~~ii~~~~~ 171 (394)
.+|++.+++ ++.|+.
T Consensus 211 ~~yL~~~~~-l~~yG~ 225 (375)
T 2al6_A 211 LKFFEILSP-VYRFDK 225 (375)
T ss_dssp HHHHHHHTT-TCCCSC
T ss_pred HHHHHHHhh-cccCCc
Confidence 999998876 455543
No 33
>1aq5_A Matrilin-1, CMP, cartilage matrix protein; coiled-coil, heptad repeat, interchain disulfide bonds, oligomerization domain, trimer; NMR {Gallus gallus} SCOP: h.1.6.1
Probab=65.37 E-value=12 Score=27.02 Aligned_cols=31 Identities=23% Similarity=0.371 Sum_probs=28.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy5114 315 TVLLDSLSDNIRNIQTDLASISERIKRLEVL 345 (394)
Q Consensus 315 ~~l~~qi~~tv~~Lq~dm~~V~~Rl~~LE~~ 345 (394)
..|+.+....|++|..-+..|.+||+.||..
T Consensus 15 v~FQ~~v~~~l~~Lt~kL~~vt~rle~lEnr 45 (47)
T 1aq5_A 15 VKFQTKVEELINTLQQKLEAVAKRIEALENK 45 (47)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 6889999999999999999999999999964
No 34
>3pvl_A Myosin VIIA isoform 1; protein complex, novel folding, protein cargo binding, cargo proteins, motor protein-protein transport complex; 2.80A {Mus musculus}
Probab=63.08 E-value=4.1 Score=43.45 Aligned_cols=72 Identities=17% Similarity=0.084 Sum_probs=48.3
Q ss_pred CCCCCCHH-HHHHHHHhhhhcccCCCCCCC----------CCc-ccH-HHHHHH-----HHHHhc----CCCCHHHHHHH
Q psy5114 100 GAYQPSND-LMLRFYSYFKQATEGPCKQPK----------PSF-WDV-VRKAKW-----DAWKKL----GNMGKEEAMEA 157 (394)
Q Consensus 100 ga~~ps~e-~~L~LYalYKQAT~Gdc~~pr----------Pg~-~D~-~~raKw-----dAW~~l----ggMS~eEAm~~ 157 (394)
|-+..+.| +...|-||.-||..||++... |.. ..- ....+| .+|+++ +|||+++|+.+
T Consensus 384 Grlpc~~E~~a~~LAAl~~Qae~Gd~~~~~~~~~~L~~~lP~~~l~~~~~~~~w~~~I~~~hkk~~~~~~g~s~~eAk~~ 463 (655)
T 3pvl_A 384 GEYRCEKEDDLAELASQQYFVDYGSEMILERLLSLVPTYIPDREITPLKNLEKWAQLAIAAHKKGIYAQRRTDSQKVKED 463 (655)
T ss_dssp TSSCCSSHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHSCGGGCCSSSCHHHHHHHHHHHHHHHHHTTCSSCHHHHHHH
T ss_pred CccCCChHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHhCCHHHHhccCCHHHHHHHHHHHHHhhhccccCCCHHHHHHH
Confidence 33455545 899999999999999986321 110 000 122334 678888 89999999999
Q ss_pred HHHHHHHHHHhcCC
Q psy5114 158 YVEELKKIVETMAY 171 (394)
Q Consensus 158 YVe~v~~ii~~~~~ 171 (394)
|++.+.+-++.|+.
T Consensus 464 yL~~a~~~lp~YG~ 477 (655)
T 3pvl_A 464 VVNYARFKWPLLFS 477 (655)
T ss_dssp HHHHHHHHCTTTSC
T ss_pred HHHHHHHhccccCc
Confidence 99998544455543
No 35
>1gk7_A Vimentin; intermediate filament, heptad repeat; 1.4A {Homo sapiens} SCOP: h.1.20.1 PDB: 3g1e_A
Probab=50.37 E-value=23 Score=24.42 Aligned_cols=28 Identities=18% Similarity=0.390 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHhH
Q psy5114 322 SDNIRNIQTDLASISERIKRLEVLSKLL 349 (394)
Q Consensus 322 ~~tv~~Lq~dm~~V~~Rl~~LE~~~~~~ 349 (394)
-.+++.|+.-+.+-..||+.||+....|
T Consensus 5 Ke~mq~LNdrlAsyidkVR~LE~~N~~L 32 (39)
T 1gk7_A 5 KVELQELNDRFANYIDKVRFLEQQNKIL 32 (39)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3578999999999999999999887765
No 36
>4eku_A Protein-tyrosine kinase 2-beta; proline-rich tyrosine kinase 2, FERM domain, transferase; 3.25A {Homo sapiens}
Probab=43.54 E-value=26 Score=34.87 Aligned_cols=68 Identities=10% Similarity=0.171 Sum_probs=46.2
Q ss_pred CCCHHHHHHHHHhhhhcccCCCCCCC----C---------C---cc--cHHH--------HHHHHHHHhcCCCCHHHHHH
Q psy5114 103 QPSNDLMLRFYSYFKQATEGPCKQPK----P---------S---FW--DVVR--------KAKWDAWKKLGNMGKEEAME 156 (394)
Q Consensus 103 ~ps~e~~L~LYalYKQAT~Gdc~~pr----P---------g---~~--D~~~--------raKwdAW~~lggMS~eEAm~ 156 (394)
..+.|+-++|-+|--|+-.||++... . + ++ ++.. +.=....+++.+|+.++||.
T Consensus 152 ~~~~e~al~LAaL~~q~~~gd~~~~a~~~k~~~~~l~k~~~lk~flP~~l~~~ik~k~~rk~I~~~~kk~~~ls~~eakl 231 (392)
T 4eku_A 152 KVSEGMALQLGCLELRRFFKDMPHNALDKKSNFELLEKEVGLDLFFPKQMQENLKPKQFRKMIQQTFQQYASLREEECVM 231 (392)
T ss_dssp TSCHHHHHHHHHHHHHHHTTTSCTTGGGSHHHHHHHHHHTCGGGTSCHHHHHHSCHHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHhhhcchhhhccCCCHHHHhhhccHHHhcCHHHHhhcCHHHHHHHHHHHHHHhcCCCHHHHHH
Confidence 46788888888888888888775311 0 0 00 1111 11124677889999999999
Q ss_pred HHHHHHHHHHHhcCC
Q psy5114 157 AYVEELKKIVETMAY 171 (394)
Q Consensus 157 ~YVe~v~~ii~~~~~ 171 (394)
+|++.+.++ +.|+.
T Consensus 232 ~YL~~l~~L-p~yG~ 245 (392)
T 4eku_A 232 KFFNTLAGF-ANIDQ 245 (392)
T ss_dssp HHHHHHTTS-SCCSC
T ss_pred HHHHHHHhh-hccCc
Confidence 999999876 66654
No 37
>2wuj_A Septum site-determining protein diviva; bacterial cell division, septation, cell cycle, sporulation; 1.40A {Bacillus subtilis} PDB: 2wuk_A
Probab=35.61 E-value=36 Score=24.92 Aligned_cols=30 Identities=7% Similarity=0.235 Sum_probs=24.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5114 315 TVLLDSLSDNIRNIQTDLASISERIKRLEV 344 (394)
Q Consensus 315 ~~l~~qi~~tv~~Lq~dm~~V~~Rl~~LE~ 344 (394)
.+++.+|+..+.+|....+++.++|..||.
T Consensus 26 D~FLd~v~~~~~~l~~e~~~L~~~~~~l~~ 55 (57)
T 2wuj_A 26 NEFLAQVRKDYEIVLRKKTELEAKVNELDE 55 (57)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 567789999999999999999999988875
No 38
>2bez_C E2 glycoprotein; coiled coil, membrane fusion, severe acute respiratory syndrome, viral protein; 1.6A {Sars coronavirus} SCOP: h.3.3.1 PDB: 1zv8_A 1zvb_A
Probab=35.23 E-value=55 Score=25.84 Aligned_cols=30 Identities=30% Similarity=0.473 Sum_probs=27.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5114 315 TVLLDSLSDNIRNIQTDLASISERIKRLEV 344 (394)
Q Consensus 315 ~~l~~qi~~tv~~Lq~dm~~V~~Rl~~LE~ 344 (394)
..|..||.....++-.++++|-+||..||.
T Consensus 47 ~~L~~qL~~NFgAISssi~dIy~RLd~leA 76 (77)
T 2bez_C 47 NTLVKQLSSNFGAISSVLNDILSRLDKVEA 76 (77)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHhhhc
Confidence 567789999999999999999999999984
No 39
>1urq_A M-tomosyn isoform; transport protein, tomosyn-snare complex, exocytosis, four helical bundle, coiled coil; 2.0A {Rattus norvegicus} SCOP: h.1.15.1
Probab=32.72 E-value=81 Score=23.62 Aligned_cols=33 Identities=15% Similarity=0.176 Sum_probs=29.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhH
Q psy5114 315 TVLLDSLSDNIRNIQTDLASISERIKRLEVLSK 347 (394)
Q Consensus 315 ~~l~~qi~~tv~~Lq~dm~~V~~Rl~~LE~~~~ 347 (394)
..+..|+..+..-|....+.|.+|-+.||.+..
T Consensus 7 ~~v~~qv~ev~~iM~~ni~kvlERGekL~~L~d 39 (63)
T 1urq_A 7 EGVKGAASGVVGELARARLALDERGQKLSDLEE 39 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 688999999999999999999999998886643
No 40
>1sfc_A VAMP 2, protein (synaptobrevin 2); membrane fusion protein complex, transport protein; 2.40A {Rattus norvegicus} SCOP: h.1.15.1
Probab=31.12 E-value=78 Score=25.47 Aligned_cols=33 Identities=12% Similarity=0.235 Sum_probs=29.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhH
Q psy5114 315 TVLLDSLSDNIRNIQTDLASISERIKRLEVLSK 347 (394)
Q Consensus 315 ~~l~~qi~~tv~~Lq~dm~~V~~Rl~~LE~~~~ 347 (394)
..|+.+|..+..-|.+.++.|.+|=+.||.+..
T Consensus 33 ~~vq~eldeVk~IM~~NI~kvLeRGEkLd~L~d 65 (96)
T 1sfc_A 33 QQTQAQVDEVVDIMRVNVDKVLERDQKLSELDD 65 (96)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 678999999999999999999999998886644
No 41
>1l4a_A Synaptobrevin; snare, snare complex, membrane fusion, neurotransmission, endocytosis/exocytosis complex; 2.95A {Loligo pealei} SCOP: h.1.15.1
Probab=26.65 E-value=1.1e+02 Score=23.58 Aligned_cols=33 Identities=9% Similarity=0.206 Sum_probs=29.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhH
Q psy5114 315 TVLLDSLSDNIRNIQTDLASISERIKRLEVLSK 347 (394)
Q Consensus 315 ~~l~~qi~~tv~~Lq~dm~~V~~Rl~~LE~~~~ 347 (394)
..+..+|..+..-|.+.++.|.+|=+.||.+..
T Consensus 18 ~~vq~el~ev~~iM~~NI~~vLeRGekLd~L~~ 50 (80)
T 1l4a_A 18 QQTQAQVEEVVDIMRVNVDKVLERDSKISELDD 50 (80)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 678999999999999999999999999887644
No 42
>3b5n_A Synaptobrevin homolog 1; snare complex, syntaxin, synaptobrevin, SNAP-25, SSO1P, SNC1P, SEC9P, SSO1, SNC1, coiled coil; 1.60A {Saccharomyces cerevisiae} SCOP: h.1.15.1
Probab=26.60 E-value=1.2e+02 Score=22.04 Aligned_cols=33 Identities=18% Similarity=0.384 Sum_probs=29.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhH
Q psy5114 315 TVLLDSLSDNIRNIQTDLASISERIKRLEVLSK 347 (394)
Q Consensus 315 ~~l~~qi~~tv~~Lq~dm~~V~~Rl~~LE~~~~ 347 (394)
..+..+|..+..-|.+.++.|.+|=+.||.+..
T Consensus 5 ~~vq~~l~evk~iM~~NI~~vl~RgekLd~L~~ 37 (61)
T 3b5n_A 5 AELQAEIDDTVGIMRDNINKVAERGERLTSIED 37 (61)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHH
Confidence 467899999999999999999999999987644
No 43
>3ci9_A Heat shock factor-binding protein 1; triple helix, nucleus, transcription; 1.80A {Homo sapiens}
Probab=26.49 E-value=59 Score=23.41 Aligned_cols=32 Identities=22% Similarity=0.276 Sum_probs=18.7
Q ss_pred hhhHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHh
Q psy5114 314 KTVLLDSLSDNIRNIQTDLA-----------SISERIKRLEVL 345 (394)
Q Consensus 314 ~~~l~~qi~~tv~~Lq~dm~-----------~V~~Rl~~LE~~ 345 (394)
.++|...+...++.||.-.+ +.-.||..||..
T Consensus 4 ~~dLt~~vq~LL~qmq~kFq~mS~~I~~riDdM~~RIDdLE~s 46 (48)
T 3ci9_A 4 VQDLTSVVQTLLQQMQDKFQTISDQIIGRIDDMSSRIDDLEKN 46 (48)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhh
Confidence 46677777777777776544 444555555543
No 44
>1n7s_A Vesicle-associated membrane protein 2; neuronal snare protein complex, four helix bundle, transport protein; 1.45A {Rattus norvegicus} SCOP: h.1.15.1 PDB: 1kil_A 3rk2_A 3rk3_A 3rl0_A 3fii_B 3g94_B
Probab=24.96 E-value=1.4e+02 Score=21.86 Aligned_cols=33 Identities=12% Similarity=0.235 Sum_probs=28.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhH
Q psy5114 315 TVLLDSLSDNIRNIQTDLASISERIKRLEVLSK 347 (394)
Q Consensus 315 ~~l~~qi~~tv~~Lq~dm~~V~~Rl~~LE~~~~ 347 (394)
..+..+|..+..-|.+.++.|.+|=+.||.+..
T Consensus 7 ~~v~~~l~ev~~iM~~NI~~vl~RGekLd~L~~ 39 (63)
T 1n7s_A 7 QQTQAQVDEVVDIMRVNVDKVLERDQKLSELDD 39 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHH
Confidence 467899999999999999999999888886644
No 45
>1gl2_A Endobrevin; membrane protein, membrane fusion protein complex, coiled coil, transmembrane; 1.9A {Rattus norvegicus} SCOP: h.1.15.1
Probab=24.82 E-value=1.4e+02 Score=22.14 Aligned_cols=33 Identities=15% Similarity=0.156 Sum_probs=29.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhH
Q psy5114 315 TVLLDSLSDNIRNIQTDLASISERIKRLEVLSK 347 (394)
Q Consensus 315 ~~l~~qi~~tv~~Lq~dm~~V~~Rl~~LE~~~~ 347 (394)
..+..+|..+..-|...++.|.+|=+.||.+..
T Consensus 12 ~~vq~~l~evk~iM~~NI~~vL~RgekLd~L~~ 44 (65)
T 1gl2_A 12 RNLQSEVEGVKNIMTQNVERILARGENLDHLRN 44 (65)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 678899999999999999999999999987644
No 46
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=23.36 E-value=86 Score=32.91 Aligned_cols=33 Identities=21% Similarity=0.352 Sum_probs=25.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHh
Q psy5114 315 TVLLDSLSDNIRNIQTDLASISERIKRLEVLSKL 348 (394)
Q Consensus 315 ~~l~~qi~~tv~~Lq~dm~~V~~Rl~~LE~~~~~ 348 (394)
.+|+.|| ..|+.||..++++...++.||.-.+.
T Consensus 124 ekVdnQl-snIrvLQsnLedq~~kIQRLEvDIdi 156 (562)
T 3ghg_A 124 RKVIEKV-QHIQLLQKNVRAQLVDMKRLEVDIDI 156 (562)
T ss_dssp HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5677888 78888888888888888888865443
No 47
>3hd7_A Vesicle-associated membrane protein 2; membrane protein, coiled-coil, 4-helical bundle, cell juncti cytoplasmic vesicle, membrane, phosphoprotein; HET: GGG; 3.40A {Rattus norvegicus} PDB: 3hd9_A 3ipd_A
Probab=20.84 E-value=1.5e+02 Score=23.40 Aligned_cols=33 Identities=12% Similarity=0.235 Sum_probs=28.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhH
Q psy5114 315 TVLLDSLSDNIRNIQTDLASISERIKRLEVLSK 347 (394)
Q Consensus 315 ~~l~~qi~~tv~~Lq~dm~~V~~Rl~~LE~~~~ 347 (394)
..++.||..+..-|.+.++.|.+|=+.||.+..
T Consensus 8 ~~vq~ev~evk~iM~~NI~kvL~RgekL~~L~~ 40 (91)
T 3hd7_A 8 QQTQAQVDEVVDIMRVNVDKVLERDQKLSELDD 40 (91)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccchHHHHHH
Confidence 678899999999999999999999888886643
Done!