BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5116
(422 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9W0T1|NU301_DROME Nucleosome-remodeling factor subunit NURF301 OS=Drosophila
melanogaster GN=E(bx) PE=1 SV=2
Length = 2669
Score = 453 bits (1165), Expect = e-126, Method: Compositional matrix adjust.
Identities = 238/446 (53%), Positives = 299/446 (67%), Gaps = 42/446 (9%)
Query: 1 MYGRIKR-RGRPPKTPNTERP--KFQVHLLKKPQYLQNLEARGLNSPITSRTSSPQGSET 57
M GR R RGRPPKTPN ER +F LLKKP+YL +++ ++P SR SPQ E
Sbjct: 1 MSGRGSRKRGRPPKTPN-ERASGRFNYQLLKKPKYLSEGKSQP-STPSASRGISPQSDEG 58
Query: 58 SRRS-----------TAKKGTKRKS----NPPTRGGRGGNQKRKQTLETDYHYGSDF--- 99
SR S AK+G RKS N + GR G E++YHYGSDF
Sbjct: 59 SRSSHNNHTNRSRGSAAKRGRGRKSAVQPNTSSYSGRKG-------YESEYHYGSDFGDS 111
Query: 100 -EDSTDHDDDLGLSESETEPEKDDPLD--EMSDSDLSLSSFSTTSGTNKKFSYISRMSPE 156
ED +D++DD+ L+ P D+ L+ S+S+ S+ SF+ N SPE
Sbjct: 112 EEDKSDNEDDMLLT-----PSDDESLEVANESESEFSVCSFNQ----NGVGRPPRPPSPE 162
Query: 157 PLWLQTERQIQPLELPRSSDDLLIPREYVMQTLSIYEVLRHFKSLIRLSPFRFEDFCAVL 216
P+WLQ RQ L+LP SS+DL I +V++ LSIYEVLR F+ ++RLSPFRFED CA L
Sbjct: 163 PVWLQEGRQYAALDLPDSSEDLFIANTHVLRALSIYEVLRRFRHMVRLSPFRFEDLCAAL 222
Query: 217 NFEEQSNLLVEIHVSLLKTIFREEDTQQTHFGPLDQKDSANSVLYFIDAMTWPEALRSYI 276
EEQS LL E+H+ LLK I REED Q THFGPLDQKD+ N LY ID++TWPE LRSY+
Sbjct: 223 ACEEQSALLTEVHIMLLKAILREEDAQGTHFGPLDQKDTVNISLYLIDSITWPEVLRSYV 282
Query: 277 ESDKTFDEEVLNILNTCEYPFTNIEKRLRVLQFLTDQILITSPVREDLIHEGGFQYDDHC 336
ESDKTFD V +IL+ EYP+T I+ RL VLQFL+DQ L ++ +R+ ++ EG YDDHC
Sbjct: 283 ESDKTFDRNVFHILSHTEYPYTGIDNRLEVLQFLSDQFLTSNSIRDVMLQEGPIHYDDHC 342
Query: 337 RVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHKVTGVTDCLPDVEKSG 396
RVCHR+G+LLCCETCPAV+HLECVDPP+ DVP EDWQC LC++HKV+GV DC+ EK G
Sbjct: 343 RVCHRLGDLLCCETCPAVYHLECVDPPMNDVPTEDWQCGLCRSHKVSGVVDCVLPQEKQG 402
Query: 397 LLCRQEHLGFDRAGRKYWFLSRRIFM 422
+L R + LG DR GRKYWF++RRIF+
Sbjct: 403 VLIRHDSLGVDRHGRKYWFIARRIFI 428
>sp|Q12830|BPTF_HUMAN Nucleosome-remodeling factor subunit BPTF OS=Homo sapiens GN=BPTF
PE=1 SV=3
Length = 3046
Score = 263 bits (672), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 133/282 (47%), Positives = 171/282 (60%), Gaps = 48/282 (17%)
Query: 133 SLSSFSTTSGTNKKFSYISRMSPEPLWLQTERQIQPLELPRSSDDLLIPREYVMQTLSIY 192
S S++S+T G K + R SP + E+ I PLE P+SS+DL++P E++M ++IY
Sbjct: 196 SHSTYSSTPGRRKPRVHRPR-SP----ILEEKDIPPLEFPKSSEDLMVPNEHIMNVIAIY 250
Query: 193 EVLRHFKSLIRLSPFRFEDFCAVLNFEEQSNLLVEIHVSLLKTIFREEDTQQTHFGPLDQ 252
EVLR+F +++RLSPFRFEDFCA L +EQ L+ E+HV LLK + REEDT T FGP D
Sbjct: 251 EVLRNFGTVLRLSPFRFEDFCAALVSQEQCTLMAEMHVVLLKAVLREEDTSNTTFGPADL 310
Query: 253 KDSANSVLYFIDAMTWPEALRSYIESDKTFDEEVLNILNTCEYPFTNIEKRLRVLQFLTD 312
KDS NS LYFID MTWPE LR Y ESDK + VL +YP+ +E +++VLQFL D
Sbjct: 311 KDSVNSTLYFIDGMTWPEVLRVYCESDKEY-HHVLPYQEAEDYPYGPVENKIKVLQFLVD 369
Query: 313 QILITSPVREDLIHEGGFQYDDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDW 372
Q L T+ RE+L+ EG QYDDHCRVCH++G+LLCCETC AV+HLECV PPL +VP+
Sbjct: 370 QFLTTNIAREELMSEGVIQYDDHCRVCHKLGDLLCCETCSAVYHLECVKPPLEEVPE--- 426
Query: 373 QCNLCKAHKVTGVTDCLPDVEKSGLLCRQEHLGFDRAGRKYW 414
W
Sbjct: 427 ---------------------------------------DEW 429
>sp|Q6BER5|NU301_CAEEL Nucleosome-remodeling factor subunit NURF301-like OS=Caenorhabditis
elegans GN=nurf-1 PE=1 SV=2
Length = 2194
Score = 184 bits (466), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 102/295 (34%), Positives = 164/295 (55%), Gaps = 17/295 (5%)
Query: 132 LSLSSFSTTSGTNKKFSYISRMSPEPLWLQTERQIQPLELPRSSDDLLIPREYVMQTLSI 191
L+L+ G +++ Y + +P L LELP SS D+ IP +M + I
Sbjct: 152 LNLTDIKIEKGLDEENKYCPWLDEDPASLPK------LELPESSQDIPIPTASIMDAVEI 205
Query: 192 YEVLRHFKSLIRLSPFRFEDFCAVLNFEEQSNLLVEIHVSLLKTIFREEDTQQTHFGPLD 251
YE+LR + +R++PF FEDFCA L S ++ E+H++LL+ + +D +QTH+ +
Sbjct: 206 YEILRSYHRTLRITPFTFEDFCAALISHNNSCIMAEVHMALLRNCLKSDDEEQTHYSVTE 265
Query: 252 QKDSANSVLYFIDAMTWPEALRSYIESDKTFDEEVLNILNTCEYPFTNIEKRLRVLQFLT 311
+S N +++ +D +T+ E LR YIE+ D V + +N YPF + +L VL F++
Sbjct: 266 TNNSVNIMIHHMDTLTYAEILRQYIEAYPFADASVRDAINVDNYPFVGYDAKLVVLLFMS 325
Query: 312 DQILITSPVREDLIHEGGFQYDDHCRVCHR-VGELLCCETCPAVFHLECVDPPLRDVPQE 370
+ L +S ++ + + G FQ D++CRVC + G ++ C C A FH+EC L+ P E
Sbjct: 326 YRFLYSSEFKKLVNNVGKFQNDENCRVCGKSSGRVVGCTQCEAAFHVECSH--LKPFP-E 382
Query: 371 DWQCNLCKAHKVTGVTDCLP---DVEKSGLLCRQEHLGFDRAGRKYWFLSRRIFM 422
CN+CK K + V LP V++ L R + +G DR GR YWF+ RR+ +
Sbjct: 383 VLVCNICK--KNSAVRGVLPPDEAVDREPL--RSQPIGRDRYGRYYWFIVRRLVV 433
>sp|Q09698|YA27_SCHPO Uncharacterized protein C2F7.07c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC2F7.07c PE=4 SV=1
Length = 607
Score = 69.7 bits (169), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 333 DDHCRVCHRVGELLCCETCPAVFHLECVDPPL--RDVPQEDWQCNLCKAHKVTGVTD 387
+D+C CH G LCCETCP FH C+DPP+ +++P + W CN CK H + D
Sbjct: 263 NDYCSACHGPGNFLCCETCPNSFHFTCIDPPIEEKNLPDDAWYCNECKHHSLYNELD 319
Score = 34.7 bits (78), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 6/45 (13%)
Query: 336 CRVCHRVG----ELLCCETCPAVFHLECVDPPLRDVPQE--DWQC 374
C CH+ +L C+ C + +H +C++PPL +P W+C
Sbjct: 409 CFRCHKSALVSQSILACDYCNSYWHPDCLNPPLATLPSNLRKWKC 453
>sp|Q04779|RCO1_YEAST Transcriptional regulatory protein RCO1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=RCO1 PE=1 SV=1
Length = 684
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 7/77 (9%)
Query: 309 FLTDQILITSPVREDLIHEGG-----FQYDDHCRVCHRVGELLCCETCPAVFHLECVDPP 363
F + I TS E + + F+ +D C C++ G LCC+TCP FH C+DPP
Sbjct: 231 FGQNSIKSTSNASEKIFRDKNNSTIDFENEDFCSACNQSGSFLCCDTCPKSFHFLCLDPP 290
Query: 364 L--RDVPQEDWQCNLCK 378
+ ++P+ DW CN CK
Sbjct: 291 IDPNNLPKGDWHCNECK 307
>sp|Q14839|CHD4_HUMAN Chromodomain-helicase-DNA-binding protein 4 OS=Homo sapiens GN=CHD4
PE=1 SV=2
Length = 1912
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 43/70 (61%), Gaps = 7/70 (10%)
Query: 322 EDLIHEGGF---QYDDH----CRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQC 374
E+++ E G + DDH CRVC GELLCC+TCP+ +H+ C++PPL ++P +W C
Sbjct: 431 EEILEEVGGDLEEEDDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLC 490
Query: 375 NLCKAHKVTG 384
C + G
Sbjct: 491 PRCTCPALKG 500
Score = 59.7 bits (143), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 322 EDLIHEGGFQYD--DHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKA 379
E++ G++ D D+C VC + GE++ C+TCP +H+ C+DP + P+ W C C+
Sbjct: 357 EEVTAVDGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEK 416
Query: 380 HKV 382
+
Sbjct: 417 EGI 419
>sp|Q6PDQ2|CHD4_MOUSE Chromodomain-helicase-DNA-binding protein 4 OS=Mus musculus GN=Chd4
PE=1 SV=1
Length = 1915
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 43/70 (61%), Gaps = 7/70 (10%)
Query: 322 EDLIHEGGF---QYDDH----CRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQC 374
E+++ E G + DDH CRVC GELLCC+TCP+ +H+ C++PPL ++P +W C
Sbjct: 424 EEILEEVGGDPEEEDDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLC 483
Query: 375 NLCKAHKVTG 384
C + G
Sbjct: 484 PRCTCPALKG 493
Score = 59.7 bits (143), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 322 EDLIHEGGFQYD--DHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKA 379
E++ G++ D D+C VC + GE++ C+TCP +H+ C+DP + P+ W C C+
Sbjct: 350 EEVTAVDGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEK 409
Query: 380 HKV 382
+
Sbjct: 410 EGI 412
>sp|O16102|CHD3_DROME Chromodomain-helicase-DNA-binding protein 3 OS=Drosophila
melanogaster GN=Chd3 PE=2 SV=3
Length = 892
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 40/58 (68%), Gaps = 5/58 (8%)
Query: 330 FQYDDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLC-----KAHKV 382
F+ +++C+VC G+LLCC++CP+V+H C+ PPL+ +P+ DW C C KA K+
Sbjct: 32 FRDEEYCKVCSDGGDLLCCDSCPSVYHRTCLSPPLKSIPKGDWICPRCIPLPGKAEKI 89
>sp|Q9Z0E3|AIRE_MOUSE Autoimmune regulator OS=Mus musculus GN=Aire PE=1 SV=1
Length = 552
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 35/52 (67%)
Query: 331 QYDDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHKV 382
+ +D C VCH GEL+CC+ CP FHL C+ PPL+++P W+C+ C +V
Sbjct: 296 KNEDECAVCHDGGELICCDGCPRAFHLACLSPPLQEIPSGLWRCSCCLQGRV 347
Score = 32.7 bits (73), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 19/44 (43%)
Query: 336 CRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKA 379
C VC E+L C C A FH C P P + +C C A
Sbjct: 434 CSVCGDGTEVLRCAHCAAAFHWRCHFPTAAARPGTNLRCKSCSA 477
>sp|O97159|CHDM_DROME Chromodomain-helicase-DNA-binding protein Mi-2 homolog
OS=Drosophila melanogaster GN=Mi-2 PE=1 SV=2
Length = 1982
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 35/53 (66%)
Query: 332 YDDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHKVTG 384
+ + CRVC GELLCC++CP+ +H C++PPL +P DW+C C +TG
Sbjct: 436 HQEFCRVCKDGGELLCCDSCPSAYHTFCLNPPLDTIPDGDWRCPRCSCPPLTG 488
Score = 59.3 bits (142), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 33/51 (64%)
Query: 327 EGGFQYDDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLC 377
+G ++ D+C VC + GE++ C+TCP +HL C++P L + P+ W C C
Sbjct: 371 DGEHEHQDYCEVCQQGGEIILCDTCPRAYHLVCLEPELDEPPEGKWSCPHC 421
>sp|Q96EK2|PF21B_HUMAN PHD finger protein 21B OS=Homo sapiens GN=PHF21B PE=2 SV=1
Length = 531
Score = 65.9 bits (159), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%)
Query: 301 EKRLRVLQFLTDQILITSPVREDLIHEGGFQYDDHCRVCHRVGELLCCETCPAVFHLECV 360
E++ +L + + +T+ ED + +D+HC C R L C TCP +HL C+
Sbjct: 320 ERKRLASNYLNNPLFLTARANEDPCWKNEITHDEHCAACKRGANLQPCGTCPGAYHLSCL 379
Query: 361 DPPLRDVPQEDWQCNLCK 378
+PPL+ P+ W C C+
Sbjct: 380 EPPLKTAPKGVWVCPRCQ 397
>sp|O43918|AIRE_HUMAN Autoimmune regulator OS=Homo sapiens GN=AIRE PE=1 SV=1
Length = 545
Score = 65.5 bits (158), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 31/45 (68%)
Query: 333 DDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLC 377
+D C VC GEL+CC+ CP FHL C+ PPLR++P W+C+ C
Sbjct: 296 EDECAVCRDGGELICCDGCPRAFHLACLSPPLREIPSGTWRCSSC 340
>sp|Q8TDI0|CHD5_HUMAN Chromodomain-helicase-DNA-binding protein 5 OS=Homo sapiens GN=CHD5
PE=2 SV=1
Length = 1954
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%)
Query: 336 CRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHKVTG 384
CRVC GELLCC+ CP+ +HL C++PPL ++P +W C C + G
Sbjct: 419 CRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCTCPPLKG 467
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 329 GFQYD--DHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHKV 382
G++ D D+C VC + GE++ C+TCP +HL C+DP L P+ W C C+ +
Sbjct: 337 GYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGI 392
>sp|Q96BD5|PF21A_HUMAN PHD finger protein 21A OS=Homo sapiens GN=PHF21A PE=1 SV=1
Length = 680
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 35/50 (70%)
Query: 329 GFQYDDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCK 378
G ++D C VC + G+LL C+TC V+HL+C+DPPL+ +P+ W C C+
Sbjct: 484 GDIHEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQ 533
>sp|Q9ULU4|PKCB1_HUMAN Protein kinase C-binding protein 1 OS=Homo sapiens GN=ZMYND8 PE=1
SV=2
Length = 1186
Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 55/98 (56%), Gaps = 8/98 (8%)
Query: 309 FLTDQILITSPVREDLIHEGGFQYDDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVP 368
+ Q L T PV D++ + G + D +C VCHR G++LCCE CP V+H +C+ L P
Sbjct: 67 YYMKQPLTTDPV--DVVPQDG-RNDFYCWVCHREGQVLCCELCPRVYHAKCLR--LTSEP 121
Query: 369 QEDWQCNLCKAHKVTGVTDCLPDVEKSGLLCRQEHLGF 406
+ DW C C+ K+T V +C+ K+ + E L +
Sbjct: 122 EGDWFCPECE--KIT-VAECIETQSKAMTMLTIEQLSY 156
>sp|Q12873|CHD3_HUMAN Chromodomain-helicase-DNA-binding protein 3 OS=Homo sapiens GN=CHD3
PE=1 SV=3
Length = 2000
Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 32/48 (66%), Gaps = 3/48 (6%)
Query: 333 DDH---CRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLC 377
DDH CRVC GELLCC+ C + +H+ C++PPL D+P +W C C
Sbjct: 453 DDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRC 500
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 329 GFQYD--DHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHKV 382
G++ D D+C VC + GE++ C+TCP +HL C+DP L P+ W C C+ V
Sbjct: 373 GYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGV 428
>sp|Q8C966|PF21B_MOUSE PHD finger protein 21B OS=Mus musculus GN=Phf21b PE=2 SV=1
Length = 487
Score = 62.8 bits (151), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 41/82 (50%)
Query: 297 FTNIEKRLRVLQFLTDQILITSPVREDLIHEGGFQYDDHCRVCHRVGELLCCETCPAVFH 356
F E++ +L + + +T+ ED +G +D+ C C R L C TC +H
Sbjct: 271 FLETERKRLASSYLHNPLFLTARANEDPCWKGEITHDEFCAACKRGASLQPCGTCSGAYH 330
Query: 357 LECVDPPLRDVPQEDWQCNLCK 378
L C+DPPL+ P+ W C C+
Sbjct: 331 LSCLDPPLKTPPKGLWVCPKCQ 352
>sp|Q6ZPK0|PF21A_MOUSE PHD finger protein 21A OS=Mus musculus GN=Phf21a PE=1 SV=2
Length = 659
Score = 62.8 bits (151), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 35/50 (70%)
Query: 329 GFQYDDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCK 378
G ++D C VC + G+LL C+TC V+HL+C++PPL+ +P+ W C C+
Sbjct: 464 GDIHEDFCSVCRKSGQLLMCDTCSRVYHLDCLEPPLKTIPKGMWICPRCQ 513
>sp|Q22516|CHD3_CAEEL Chromodomain-helicase-DNA-binding protein 3 homolog
OS=Caenorhabditis elegans GN=chd-3 PE=2 SV=2
Length = 1787
Score = 62.4 bits (150), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 30/44 (68%)
Query: 334 DHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLC 377
D+CR+C +L C+TCP+ +H C+DPPL ++P+ +W C C
Sbjct: 329 DYCRICKETSNILLCDTCPSSYHAYCIDPPLTEIPEGEWSCPRC 372
Score = 55.5 bits (132), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 31/49 (63%)
Query: 332 YDDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAH 380
+ ++C VC++ GEL+ C+TC +H+ C+D + P+ DW C C+ H
Sbjct: 264 HQENCEVCNQDGELMLCDTCTRAYHVACIDENMEQPPEGDWSCPHCEEH 312
>sp|Q6E2N3|TRI33_DANRE E3 ubiquitin-protein ligase TRIM33 OS=Danio rerio GN=trim33 PE=2
SV=1
Length = 1163
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 28/46 (60%)
Query: 333 DDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCK 378
+D C VC GELLCC+ CP VFH+ C P L+ P DW C C+
Sbjct: 921 EDWCAVCQNGGELLCCDHCPKVFHITCHIPTLKSSPSGDWMCTFCR 966
>sp|O15164|TIF1A_HUMAN Transcription intermediary factor 1-alpha OS=Homo sapiens GN=TRIM24
PE=1 SV=3
Length = 1050
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 28/46 (60%)
Query: 333 DDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCK 378
+D C VC GELLCCE CP VFHL C P L + P +W C C+
Sbjct: 826 EDWCAVCQNGGELLCCEKCPKVFHLSCHVPTLTNFPSGEWICTFCR 871
>sp|Q64127|TIF1A_MOUSE Transcription intermediary factor 1-alpha OS=Mus musculus GN=Trim24
PE=1 SV=1
Length = 1051
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 28/46 (60%)
Query: 333 DDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCK 378
+D C VC GELLCCE CP VFHL C P L + P +W C C+
Sbjct: 827 EDWCAVCQNGGELLCCEKCPKVFHLTCHVPTLTNFPSGEWICTFCR 872
>sp|Q9UPN9|TRI33_HUMAN E3 ubiquitin-protein ligase TRIM33 OS=Homo sapiens GN=TRIM33 PE=1
SV=3
Length = 1127
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 27/46 (58%)
Query: 333 DDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCK 378
+D C VC G+LLCCE CP VFHL C P L P DW C C+
Sbjct: 887 EDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFCR 932
>sp|Q99PP7|TRI33_MOUSE E3 ubiquitin-protein ligase TRIM33 OS=Mus musculus GN=Trim33 PE=1
SV=2
Length = 1142
Score = 59.7 bits (143), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 27/46 (58%)
Query: 333 DDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCK 378
+D C VC G+LLCCE CP VFHL C P L P DW C C+
Sbjct: 902 EDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFCR 947
>sp|O15016|TRI66_HUMAN Tripartite motif-containing protein 66 OS=Homo sapiens GN=TRIM66 PE=2
SV=4
Length = 1216
Score = 59.7 bits (143), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 30/50 (60%)
Query: 330 FQYDDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKA 379
+ +D C VC GELLCC+ CP VFHL C P L P +W C LC++
Sbjct: 967 IENEDFCAVCLNGGELLCCDRCPKVFHLSCHVPALLSFPGGEWVCTLCRS 1016
>sp|O88491|NSD1_MOUSE Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20
specific OS=Mus musculus GN=Nsd1 PE=1 SV=1
Length = 2588
Score = 59.3 bits (142), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 31/46 (67%), Gaps = 3/46 (6%)
Query: 336 CRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHK 381
C VC G LLCC++CPA FH EC++ D+P+ +W CN CKA K
Sbjct: 1608 CFVCSEGGSLLCCDSCPAAFHRECLN---IDIPEGNWYCNDCKAGK 1650
Score = 43.1 bits (100), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 7/63 (11%)
Query: 328 GGFQYDDHCRVCHRVGELLCCET-CPAVFHLECVDPPLRDVPQEDWQCNLCKAHKVTGVT 386
G ++ C+ C ++GELL CE C FHLEC+ P ++P+ + CN C TG+
Sbjct: 1436 GAALKENVCQNCEKLGELLLCEAQCCGAFHLECLGLP--EMPRGKFICNECH----TGIH 1489
Query: 387 DCL 389
C
Sbjct: 1490 TCF 1492
Score = 35.8 bits (81), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
Query: 331 QYDDHCRVCHRVGELLCCET--CPAVFHLECVDPPLRDVPQEDWQC 374
+ +D C C G+L+ C+ CP V+H +C++ L P W+C
Sbjct: 2014 EREDECFSCGDAGQLVSCKKPGCPKVYHADCLN--LTKRPAGKWEC 2057
>sp|Q96L73|NSD1_HUMAN Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20
specific OS=Homo sapiens GN=NSD1 PE=1 SV=1
Length = 2696
Score = 58.9 bits (141), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 31/46 (67%), Gaps = 3/46 (6%)
Query: 336 CRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHK 381
C VC G LLCC++CPA FH EC++ D+P+ +W CN CKA K
Sbjct: 1710 CFVCSEGGSLLCCDSCPAAFHRECLN---IDIPEGNWYCNDCKAGK 1752
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 7/63 (11%)
Query: 328 GGFQYDDHCRVCHRVGELLCCET-CPAVFHLECVDPPLRDVPQEDWQCNLCKAHKVTGVT 386
G ++ C+ C ++GELL CE C FHLEC+ L ++P+ + CN C+ TG+
Sbjct: 1538 GAALKENVCQNCEKLGELLLCEAQCCGAFHLECLG--LTEMPRGKFICNECR----TGIH 1591
Query: 387 DCL 389
C
Sbjct: 1592 TCF 1594
Score = 35.4 bits (80), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
Query: 331 QYDDHCRVCHRVGELLCCET--CPAVFHLECVDPPLRDVPQEDWQC 374
+ +D C C G+L+ C+ CP V+H +C++ L P W+C
Sbjct: 2116 EREDECFSCGDAGQLVSCKKPGCPKVYHADCLN--LTKRPAGKWEC 2159
>sp|Q924W6|TRI66_MOUSE Tripartite motif-containing protein 66 OS=Mus musculus GN=Trim66 PE=1
SV=3
Length = 1242
Score = 58.9 bits (141), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 30/50 (60%)
Query: 330 FQYDDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKA 379
+ +D C VC GELLCC+ CP V+HL C P L P +W C LC++
Sbjct: 993 IENEDFCAVCINGGELLCCDRCPKVYHLSCHVPALLSFPGGEWVCTLCRS 1042
>sp|Q56R14|TRI33_XENLA E3 ubiquitin-protein ligase TRIM33 OS=Xenopus laevis GN=trim33 PE=1
SV=1
Length = 1091
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 27/46 (58%)
Query: 333 DDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCK 378
+D C VC G+LLCCE CP VFHL C P L P +W C C+
Sbjct: 850 EDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGEWICTFCR 895
>sp|Q9HB58|SP110_HUMAN Sp110 nuclear body protein OS=Homo sapiens GN=SP110 PE=1 SV=5
Length = 689
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 334 DHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHKVTGVTDC 388
D C VC + G+LLCC TCP VFH +C PP+ + + W C C+ + +G C
Sbjct: 535 DECEVCCQGGQLLCCGTCPRVFHEDCHIPPV-EAKRMLWSCTFCRMKRSSGSQQC 588
>sp|Q13263|TIF1B_HUMAN Transcription intermediary factor 1-beta OS=Homo sapiens GN=TRIM28
PE=1 SV=5
Length = 835
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 29/42 (69%)
Query: 336 CRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLC 377
CRVC + G+L+ C C FHL+C P L+DVP E+W C+LC
Sbjct: 628 CRVCQKPGDLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLC 669
>sp|Q96QT6|PHF12_HUMAN PHD finger protein 12 OS=Homo sapiens GN=PHF12 PE=1 SV=2
Length = 1004
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Query: 334 DHCRVCHRVGELLCCETCPAVFHLECVDPPLRD--VPQEDWQCNLC 377
D C C G+LLCC+ CPA FHL+C +PPL + +P +W C+ C
Sbjct: 57 DSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRC 102
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 336 CRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQC 374
C RV L+ C+ CP +FH++C++PPL +P W C
Sbjct: 277 CNRSCRVAPLIQCDYCPLLFHMDCLEPPLTAMPLGRWMC 315
>sp|G5EBZ4|LE418_CAEEL Protein let-418 OS=Caenorhabditis elegans GN=let-418 PE=1 SV=1
Length = 1829
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 29/48 (60%)
Query: 333 DDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAH 380
+D+C C + GELL C+TCP +H C+D + + P+ DW C C H
Sbjct: 256 NDYCEECKQDGELLLCDTCPRAYHTVCIDENMEEPPEGDWSCAHCIEH 303
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 331 QYDDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQED-WQCNLCKA----HKVTGV 385
Q D+ C++C LL C++C FH C+DPPL +VP+E+ W C C+ HK+ +
Sbjct: 315 QNDEFCKICKETENLLLCDSCVCSFHAYCIDPPLTEVPKEETWSCPRCETVKPEHKIEKI 374
>sp|Q62318|TIF1B_MOUSE Transcription intermediary factor 1-beta OS=Mus musculus GN=Trim28
PE=1 SV=3
Length = 834
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 29/42 (69%)
Query: 336 CRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLC 377
CRVC + G+L+ C C FHL+C P L+DVP E+W C+LC
Sbjct: 628 CRVCQKPGDLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLC 669
>sp|Q5SPL2|PHF12_MOUSE PHD finger protein 12 OS=Mus musculus GN=Phf12 PE=2 SV=1
Length = 1003
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Query: 334 DHCRVCHRVGELLCCETCPAVFHLECVDPPLRD--VPQEDWQCNLC 377
D C C G+LLCC+ CPA FHL+C +PPL + +P +W C+ C
Sbjct: 57 DSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRC 102
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 336 CRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQC 374
C RV L+ C+ CP +FH++C++PPL +P W C
Sbjct: 277 CNRSCRVAPLIQCDYCPLLFHMDCLEPPLTAMPLGRWMC 315
>sp|O08629|TIF1B_RAT Transcription intermediary factor 1-beta OS=Rattus norvegicus
GN=Trim28 PE=1 SV=2
Length = 835
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 29/42 (69%)
Query: 336 CRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLC 377
CRVC + G+L+ C C FHL+C P L+DVP E+W C+LC
Sbjct: 629 CRVCQKPGDLVMCNQCEFCFHLDCHLPSLQDVPGEEWSCSLC 670
>sp|Q9P1Y6|PHRF1_HUMAN PHD and RING finger domain-containing protein 1 OS=Homo sapiens
GN=PHRF1 PE=1 SV=3
Length = 1649
Score = 55.8 bits (133), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 336 CRVCHRVGE---LLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHKVTGVTDCLPDV 392
C VC R LL C+ C A +H+EC+DPPL++VP ++W C C A V D P
Sbjct: 186 CEVCGRSDREDRLLLCDGCDAGYHMECLDPPLQEVPVDEWFCPECAAPGVVLAADAGPVS 245
Query: 393 EK 394
E+
Sbjct: 246 EE 247
>sp|A6H619|PHRF1_MOUSE PHD and RING finger domain-containing protein 1 OS=Mus musculus
GN=Phrf1 PE=1 SV=2
Length = 1682
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 44/92 (47%), Gaps = 5/92 (5%)
Query: 313 QILITSPVREDLIHEGGFQYDDHCRVCHRVGE---LLCCETCPAVFHLECVDPPLRDVPQ 369
+IL PV E + C VC R LL C+ C A +H+EC+DPPL++VP
Sbjct: 165 KILKKIPVENTKACEAEEEDPTFCEVCGRSDREDRLLLCDGCDAGYHMECLDPPLQEVPV 224
Query: 370 EDWQCNLCKAHKVTGVTDCLP--DVEKSGLLC 399
++W C C V D P D E S LL
Sbjct: 225 DEWFCPECTVPGVDPTHDAAPVSDEEVSLLLA 256
>sp|Q63625|PHRF1_RAT PHD and RING finger domain-containing protein 1 OS=Rattus
norvegicus GN=Phrf1 PE=1 SV=2
Length = 1685
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Query: 336 CRVCHRVGE---LLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHKVTGVTDCLP-- 390
C VC R LL C+ C A +H+EC+DPPL++VP ++W C C V D P
Sbjct: 191 CEVCGRSDREDRLLLCDGCDAGYHMECLDPPLQEVPVDEWFCPECAVPGVDPTHDAAPVS 250
Query: 391 DVEKSGLLC 399
D E S LL
Sbjct: 251 DEEVSLLLA 259
>sp|Q9HDV4|LID2_SCHPO Lid2 complex component lid2 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=lid2 PE=1 SV=1
Length = 1513
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 311 TDQILITSPVREDLIHEGGFQYDDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQE 370
T Q+ ++ ++ LI G + ++C + +L C+ C A +H C+DPPL +P+E
Sbjct: 251 TIQVNGSTSLKRPLIERG--EQCEYCGLDKNPETILLCDGCEAAYHTSCLDPPLTSIPKE 308
Query: 371 DWQCNLCK 378
DW C+ CK
Sbjct: 309 DWYCDACK 316
>sp|Q09819|YAC5_SCHPO Uncharacterized protein C16C9.05 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC16C9.05 PE=1 SV=1
Length = 404
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 4/51 (7%)
Query: 334 DHCRVCHRVGELLCCETCPAVFHLECVDPPL--RDVPQEDWQCNLC--KAH 380
D+C C G +CCE CP FHL C++PPL ++P+ W C C K+H
Sbjct: 118 DYCSACGGRGLFICCEGCPCSFHLSCLEPPLTPENIPEGSWFCVTCSIKSH 168
>sp|Q9H930|LY10L_HUMAN Nuclear body protein SP140-like protein OS=Homo sapiens GN=SP140L
PE=2 SV=3
Length = 580
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 334 DHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHKVTGVTDCLPDVE 393
D C VC GEL CC+TC VFH +C PP+ + + W C C+ + G C + E
Sbjct: 404 DECEVCRDGGELFCCDTCSRVFHEDCHIPPV-ESEKTPWNCIFCRMKESPGSQQCCQESE 462
>sp|Q13342|LY10_HUMAN Nuclear body protein SP140 OS=Homo sapiens GN=SP140 PE=2 SV=2
Length = 867
Score = 52.8 bits (125), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 334 DHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHKVTGVTDCLPDVE 393
D C VC GEL CC+TC VFH +C PP+ + + W C C+ + G C + E
Sbjct: 691 DECEVCRDGGELFCCDTCSRVFHEDCHIPPV-EAERTPWNCIFCRMKESPGSQQCCQESE 749
>sp|Q6P2L6|NSD3_MOUSE Histone-lysine N-methyltransferase NSD3 OS=Mus musculus GN=Whsc1l1
PE=1 SV=2
Length = 1439
Score = 52.4 bits (124), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 28/43 (65%), Gaps = 3/43 (6%)
Query: 339 CHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHK 381
C + G LLCCE+CPA FH EC+ D+P+ W CN CKA K
Sbjct: 917 CEKGGRLLCCESCPASFHPECLS---IDMPEGCWNCNDCKAGK 956
Score = 34.7 bits (78), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 41/106 (38%), Gaps = 29/106 (27%)
Query: 332 YDDHCRVCHRVGELLCCET--CPAVFHLECVDPPLRDVPQEDWQC--------------- 374
++D+C C GEL+ C+ CP +HL C++ L P W+C
Sbjct: 1322 HEDYCFQCGDGGELVMCDKKDCPKAYHLLCLN--LTQPPHGKWECPWHRCDECGSVAVSF 1379
Query: 375 ------NLCKAHKVTGVTDCLPDVEKSGLLCRQEHLGFDRAGRKYW 414
+ CKAH G +P + G LC H +YW
Sbjct: 1380 CEFCPHSFCKAH---GKGALVPSALE-GRLCCSSHDPASPVSPEYW 1421
>sp|Q9S775|PKL_ARATH CHD3-type chromatin-remodeling factor PICKLE OS=Arabidopsis
thaliana GN=PKL PE=1 SV=1
Length = 1384
Score = 52.0 bits (123), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 333 DDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKA--HKVTGVTDC 388
++ C+ C L+ C TC FH +C+ PPL+D E+W+C C + +++ + DC
Sbjct: 49 ENACQACGESTNLVSCNTCTYAFHAKCLVPPLKDASVENWRCPECVSPLNEIDKILDC 106
>sp|O96028|NSD2_HUMAN Histone-lysine N-methyltransferase NSD2 OS=Homo sapiens GN=WHSC1
PE=1 SV=1
Length = 1365
Score = 52.0 bits (123), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Query: 336 CRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHK 381
C VC + G LLCCE+CPA FH +C++ ++P W CN C+A K
Sbjct: 834 CFVCSKGGSLLCCESCPAAFHPDCLN---IEMPDGSWFCNDCRAGK 876
Score = 32.3 bits (72), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 7/55 (12%)
Query: 336 CRVCHRVGELLCCET-CPAVFHLECVDPPLRDVPQEDWQCNLCKAHKVTGVTDCL 389
C++C + G LL CE C FHL C+ L P+ + C+ C +G+ C
Sbjct: 670 CQLCEKPGSLLLCEGPCCGAFHLACLG--LSRRPEGRFTCSEC----ASGIHSCF 718
>sp|Q8BVE8|NSD2_MOUSE Histone-lysine N-methyltransferase NSD2 OS=Mus musculus GN=Whsc1
PE=1 SV=2
Length = 1365
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 29/46 (63%), Gaps = 3/46 (6%)
Query: 336 CRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHK 381
C VC + G LLCCE CPA FH +C++ ++P W CN C+A K
Sbjct: 834 CFVCSKGGSLLCCEACPAAFHPDCLN---IEMPDGSWFCNDCRAGK 876
Score = 33.1 bits (74), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 7/55 (12%)
Query: 336 CRVCHRVGELLCCET-CPAVFHLECVDPPLRDVPQEDWQCNLCKAHKVTGVTDCL 389
C++C + G LL CE C FHL C+ L P+ + C C +G+ C
Sbjct: 670 CQLCEKTGSLLLCEGPCCGAFHLACLG--LSRRPEGRFTCTEC----ASGIHSCF 718
>sp|Q9BZ95|NSD3_HUMAN Histone-lysine N-methyltransferase NSD3 OS=Homo sapiens GN=WHSC1L1
PE=1 SV=1
Length = 1437
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 29/45 (64%), Gaps = 3/45 (6%)
Query: 337 RVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHK 381
+ C + G LLCCE+CPA FH EC+ ++P+ W CN CKA K
Sbjct: 915 KKCEKGGRLLCCESCPASFHPECLS---IEMPEGCWNCNDCKAGK 956
Score = 37.0 bits (84), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 42/102 (41%), Gaps = 21/102 (20%)
Query: 332 YDDHCRVCHRVGELLCCET--CPAVFHLECVDPPLRDVPQEDW-----QCNLCKAHKVTG 384
++D+C C GEL+ C+ CP +HL C++ L P W QC+ C + V+
Sbjct: 1320 HEDYCFQCGDGGELVMCDKKDCPKAYHLLCLN--LTQPPYGKWECPWHQCDECSSAAVSF 1377
Query: 385 VTDC----LPDVEKSGL--------LCRQEHLGFDRAGRKYW 414
C D EK L LC EH +YW
Sbjct: 1378 CEFCPHSFCKDHEKGALVPSALEGRLCCSEHDPMAPVSPEYW 1419
>sp|P47156|JHD2_YEAST Histone demethylase JHD2 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=JHD2 PE=1 SV=1
Length = 728
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 333 DDHCRVCHRVGE---LLCCETCPAVFHLECVDPPLRDVPQEDWQCNLC 377
DD C VC + + + C++C FH+ C+ PPL VP DW CN C
Sbjct: 235 DDACIVCRKTNDPKRTILCDSCDKPFHIYCLSPPLERVPSGDWICNTC 282
>sp|Q9UIG0|BAZ1B_HUMAN Tyrosine-protein kinase BAZ1B OS=Homo sapiens GN=BAZ1B PE=1 SV=2
Length = 1483
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
Query: 336 CRVCHRVGE---LLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCK 378
C+VC + GE L+ C+ C FHL C+ P L +VP +WQC C+
Sbjct: 1187 CKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEVPDGEWQCPACQ 1232
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.136 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 167,343,090
Number of Sequences: 539616
Number of extensions: 7514030
Number of successful extensions: 26415
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 154
Number of HSP's successfully gapped in prelim test: 181
Number of HSP's that attempted gapping in prelim test: 25362
Number of HSP's gapped (non-prelim): 974
length of query: 422
length of database: 191,569,459
effective HSP length: 120
effective length of query: 302
effective length of database: 126,815,539
effective search space: 38298292778
effective search space used: 38298292778
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)