Query psy5116
Match_columns 422
No_of_seqs 259 out of 857
Neff 5.3
Searched_HMMs 29240
Date Fri Aug 16 17:39:07 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5116.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/5116hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1mm2_A MI2-beta; PHD, zinc fin 99.6 1.9E-15 6.4E-20 116.3 5.1 57 328-384 4-60 (61)
2 1xwh_A Autoimmune regulator; P 99.5 1.8E-14 6.1E-19 112.4 4.2 52 331-382 6-57 (66)
3 1fp0_A KAP-1 corepressor; PHD 99.5 3.6E-14 1.2E-18 116.9 6.0 53 329-381 21-73 (88)
4 2yql_A PHD finger protein 21A; 99.5 1.9E-14 6.7E-19 108.6 4.0 53 327-379 3-55 (56)
5 2lri_C Autoimmune regulator; Z 99.4 4.3E-14 1.5E-18 110.6 3.3 51 331-381 10-60 (66)
6 2l5u_A Chromodomain-helicase-D 99.4 5.4E-14 1.8E-18 108.2 3.2 52 329-380 7-58 (61)
7 2e6r_A Jumonji/ARID domain-con 99.4 6.7E-14 2.3E-18 116.0 3.3 70 330-414 13-85 (92)
8 2puy_A PHD finger protein 21A; 99.4 6.9E-14 2.4E-18 106.9 3.0 51 331-381 3-53 (60)
9 3o36_A Transcription intermedi 99.4 1.8E-13 6.3E-18 125.6 5.3 52 331-382 2-53 (184)
10 3u5n_A E3 ubiquitin-protein li 99.4 2.1E-13 7.3E-18 127.6 4.9 54 329-382 3-56 (207)
11 2yt5_A Metal-response element- 99.3 9E-13 3.1E-17 102.1 2.5 51 331-381 4-62 (66)
12 1f62_A Transcription factor WS 99.3 1.3E-12 4.3E-17 96.5 2.6 45 335-379 2-49 (51)
13 2ro1_A Transcription intermedi 99.3 2.4E-12 8.2E-17 119.3 4.5 49 333-381 2-50 (189)
14 1wev_A Riken cDNA 1110020M19; 99.2 1.5E-12 5.1E-17 107.1 1.7 51 331-381 14-73 (88)
15 2l43_A N-teminal domain from h 99.2 4.4E-12 1.5E-16 104.3 3.2 51 329-381 21-76 (88)
16 2ku3_A Bromodomain-containing 99.2 2E-12 7E-17 102.4 0.9 50 330-381 13-67 (71)
17 2e6s_A E3 ubiquitin-protein li 99.2 7.6E-12 2.6E-16 100.6 4.2 48 332-379 25-76 (77)
18 3asl_A E3 ubiquitin-protein li 99.2 1.1E-11 3.7E-16 97.9 3.6 46 335-380 20-69 (70)
19 2lbm_A Transcriptional regulat 99.1 1.5E-12 5.3E-17 115.9 -2.7 73 329-401 59-139 (142)
20 4gne_A Histone-lysine N-methyl 99.1 2.4E-11 8.3E-16 103.5 4.5 54 326-381 8-63 (107)
21 3shb_A E3 ubiquitin-protein li 99.1 5.6E-11 1.9E-15 95.6 3.7 45 335-379 28-76 (77)
22 3ask_A E3 ubiquitin-protein li 99.0 8.1E-11 2.8E-15 112.0 3.8 48 332-379 173-224 (226)
23 3v43_A Histone acetyltransfera 99.0 1.6E-10 5.6E-15 98.5 4.0 45 335-379 63-111 (112)
24 2kwj_A Zinc finger protein DPF 99.0 2.1E-10 7.1E-15 98.2 2.8 47 334-380 59-108 (114)
25 2ysm_A Myeloid/lymphoid or mix 98.9 1.5E-09 5.2E-14 91.9 5.5 76 330-417 4-83 (111)
26 2ysm_A Myeloid/lymphoid or mix 98.9 7.3E-10 2.5E-14 93.9 3.5 48 334-381 55-105 (111)
27 3ql9_A Transcriptional regulat 98.9 8.2E-11 2.8E-15 103.2 -2.7 57 329-385 53-116 (129)
28 2k16_A Transcription initiatio 98.9 6E-10 2.1E-14 88.3 2.2 52 330-381 15-69 (75)
29 1wen_A Inhibitor of growth fam 98.7 8.7E-09 3E-13 81.5 5.2 47 332-381 15-66 (71)
30 3c6w_A P28ING5, inhibitor of g 98.7 6.8E-09 2.3E-13 79.3 2.7 45 333-380 9-58 (59)
31 2vnf_A ING 4, P29ING4, inhibit 98.6 8.6E-09 3E-13 78.8 2.6 45 333-380 10-59 (60)
32 1weu_A Inhibitor of growth fam 98.6 2.3E-08 7.9E-13 82.8 5.3 47 332-381 35-86 (91)
33 2lv9_A Histone-lysine N-methyl 98.6 2.3E-08 8E-13 83.5 4.4 46 335-381 32-77 (98)
34 2g6q_A Inhibitor of growth pro 98.6 1.6E-08 5.4E-13 78.0 2.8 45 333-380 11-60 (62)
35 2jmi_A Protein YNG1, ING1 homo 98.4 6.8E-08 2.3E-12 79.8 3.0 45 332-379 25-75 (90)
36 2kwj_A Zinc finger protein DPF 98.3 2E-07 6.8E-12 79.6 1.4 73 334-417 2-87 (114)
37 1we9_A PHD finger family prote 98.0 2E-06 6.9E-11 65.8 2.8 50 332-381 5-59 (64)
38 1x4i_A Inhibitor of growth pro 98.0 1.9E-06 6.6E-11 67.8 1.5 44 334-380 7-55 (70)
39 3v43_A Histone acetyltransfera 97.9 1.8E-06 6.3E-11 73.3 -0.1 75 332-417 4-91 (112)
40 3o70_A PHD finger protein 13; 97.9 7.6E-06 2.6E-10 64.0 3.2 45 334-380 20-67 (68)
41 1wil_A KIAA1045 protein; ring 97.8 3.3E-06 1.1E-10 68.7 0.5 54 328-381 10-77 (89)
42 2ri7_A Nucleosome-remodeling f 97.7 3.3E-06 1.1E-10 76.3 -1.4 49 332-381 7-60 (174)
43 1wee_A PHD finger family prote 97.7 1.8E-05 6.2E-10 62.1 3.0 50 331-381 14-67 (72)
44 2xb1_A Pygopus homolog 2, B-ce 97.7 9E-06 3.1E-10 68.6 1.2 48 334-381 4-62 (105)
45 1wew_A DNA-binding family prot 97.5 3.1E-05 1.1E-09 61.8 2.5 49 332-381 15-73 (78)
46 1wem_A Death associated transc 97.5 1.3E-05 4.3E-10 63.5 -0.1 49 332-381 15-71 (76)
47 2vpb_A Hpygo1, pygopus homolog 97.4 1.3E-05 4.6E-10 62.1 -1.1 47 332-378 7-64 (65)
48 1wep_A PHF8; structural genomi 97.4 3.8E-05 1.3E-09 61.3 1.0 47 334-381 13-64 (79)
49 2kgg_A Histone demethylase jar 97.1 6.1E-05 2.1E-09 55.6 -0.3 43 336-378 5-52 (52)
50 3o7a_A PHD finger protein 13 v 97.1 0.00022 7.6E-09 52.5 2.2 41 338-379 8-51 (52)
51 2rsd_A E3 SUMO-protein ligase 96.8 0.00054 1.9E-08 53.1 2.5 44 335-380 12-65 (68)
52 3kqi_A GRC5, PHD finger protei 96.7 0.00036 1.2E-08 55.1 0.7 46 335-381 12-62 (75)
53 3a1b_A DNA (cytosine-5)-methyl 96.4 0.00057 1.9E-08 61.8 0.2 55 331-385 77-139 (159)
54 3lqh_A Histone-lysine N-methyl 96.3 0.0015 5.1E-08 60.2 2.2 49 334-382 3-65 (183)
55 3kv5_D JMJC domain-containing 96.3 0.00057 2E-08 71.6 -0.7 47 334-381 38-89 (488)
56 3pur_A Lysine-specific demethy 95.8 0.0029 9.9E-08 66.7 2.1 37 344-380 57-94 (528)
57 2pv0_B DNA (cytosine-5)-methyl 95.7 0.00097 3.3E-08 67.9 -2.0 56 330-385 90-153 (386)
58 3kv4_A PHD finger protein 8; e 94.9 0.0022 7.7E-08 66.5 -2.3 46 336-381 7-57 (447)
59 4bbq_A Lysine-specific demethy 94.7 0.012 4.2E-07 49.4 2.1 37 344-380 74-114 (117)
60 4gne_A Histone-lysine N-methyl 94.2 0.02 6.8E-07 48.4 2.3 39 335-374 60-98 (107)
61 2ku7_A MLL1 PHD3-CYP33 RRM chi 92.0 0.036 1.2E-06 46.5 0.7 37 345-381 2-45 (140)
62 3rsn_A SET1/ASH2 histone methy 85.2 0.58 2E-05 42.8 3.6 43 339-381 10-60 (177)
63 1iym_A EL5; ring-H2 finger, ub 83.0 0.46 1.6E-05 33.6 1.6 45 332-380 4-52 (55)
64 2ct0_A Non-SMC element 1 homol 75.5 0.57 1.9E-05 36.8 -0.0 45 334-380 16-61 (74)
65 2kiz_A E3 ubiquitin-protein li 73.0 0.34 1.2E-05 36.1 -1.8 46 331-380 12-60 (69)
66 2l0b_A E3 ubiquitin-protein li 72.8 0.47 1.6E-05 37.7 -1.1 46 331-380 38-86 (91)
67 2ect_A Ring finger protein 126 71.6 1.2 4.1E-05 33.8 1.0 47 331-381 13-62 (78)
68 1x4j_A Ring finger protein 38; 70.1 0.4 1.4E-05 36.4 -2.0 45 332-380 22-69 (75)
69 1e8j_A Rubredoxin; iron-sulfur 69.3 4.6 0.00016 29.6 3.7 17 364-381 30-46 (52)
70 6rxn_A Rubredoxin; electron tr 68.5 2 6.9E-05 30.9 1.5 34 347-381 6-40 (46)
71 4a0k_B E3 ubiquitin-protein li 67.8 1.2 4.1E-05 37.9 0.3 27 350-380 83-109 (117)
72 2kn9_A Rubredoxin; metalloprot 67.4 3.1 0.00011 33.4 2.6 18 363-381 53-70 (81)
73 4bbq_A Lysine-specific demethy 65.3 1.3 4.5E-05 36.8 0.0 36 334-380 8-43 (117)
74 3k1l_B Fancl; UBC, ring, RWD, 65.2 3.4 0.00012 41.8 3.0 48 333-380 308-370 (381)
75 1vyx_A ORF K3, K3RING; zinc-bi 65.0 0.32 1.1E-05 36.4 -3.4 47 332-380 5-56 (60)
76 2ecm_A Ring finger and CHY zin 63.6 0.64 2.2E-05 32.8 -1.9 44 333-380 5-52 (55)
77 1v87_A Deltex protein 2; ring- 62.8 0.81 2.8E-05 37.4 -1.7 34 348-381 58-92 (114)
78 2ecl_A Ring-box protein 2; RNF 62.7 1.2 4E-05 34.7 -0.7 28 349-380 46-73 (81)
79 2d8s_A Cellular modulator of i 62.0 2.7 9.1E-05 33.1 1.2 48 332-381 14-68 (80)
80 1dx8_A Rubredoxin; electron tr 60.3 3.9 0.00013 31.8 1.9 16 365-381 35-50 (70)
81 1yk4_A Rubredoxin, RD; electro 60.0 3.7 0.00013 30.1 1.6 16 365-381 30-45 (52)
82 1s24_A Rubredoxin 2; electron 59.5 3.3 0.00011 33.7 1.4 17 364-381 62-78 (87)
83 2lq6_A Bromodomain-containing 59.1 3.1 0.00011 33.5 1.2 30 332-361 16-49 (87)
84 3nw0_A Non-structural maintena 58.3 2.2 7.5E-05 40.4 0.2 46 333-380 180-226 (238)
85 2v3b_B Rubredoxin 2, rubredoxi 56.9 4.6 0.00016 29.9 1.7 16 365-381 31-46 (55)
86 3dpl_R Ring-box protein 1; ubi 56.7 1.1 3.8E-05 37.2 -2.0 28 349-380 71-98 (106)
87 4rxn_A Rubredoxin; electron tr 56.4 4 0.00014 30.2 1.3 16 365-381 31-46 (54)
88 2k1p_A Zinc finger RAN-binding 55.5 7.1 0.00024 25.8 2.3 23 369-391 4-26 (33)
89 2lk0_A RNA-binding protein 5; 53.9 3.6 0.00012 27.1 0.6 23 369-391 3-25 (32)
90 2ep4_A Ring finger protein 24; 53.8 0.93 3.2E-05 34.1 -2.7 46 331-380 13-61 (74)
91 1weq_A PHD finger protein 7; s 52.0 9 0.00031 31.0 2.8 33 344-379 45-78 (85)
92 2d8t_A Dactylidin, ring finger 51.4 3.1 0.00011 31.0 -0.0 44 332-380 14-58 (71)
93 2djb_A Polycomb group ring fin 50.3 3.7 0.00013 30.7 0.2 47 330-380 12-59 (72)
94 2ea6_A Ring finger protein 4; 50.2 3.2 0.00011 30.2 -0.2 46 331-380 13-65 (69)
95 1bor_A Transcription factor PM 49.6 15 0.0005 26.2 3.4 42 333-381 6-47 (56)
96 2ckl_B Ubiquitin ligase protei 49.4 1.7 6E-05 37.9 -2.0 47 331-380 52-99 (165)
97 3l11_A E3 ubiquitin-protein li 48.1 5.9 0.0002 32.3 1.2 45 332-380 14-59 (115)
98 3ng2_A RNF4, snurf, ring finge 47.9 3.4 0.00012 30.4 -0.3 45 332-380 9-60 (71)
99 2ecn_A Ring finger protein 141 47.6 2.1 7.3E-05 31.6 -1.5 44 332-380 14-57 (70)
100 2egp_A Tripartite motif-contai 47.6 8.8 0.0003 28.7 2.0 50 331-381 10-63 (79)
101 2ysl_A Tripartite motif-contai 47.3 4.2 0.00014 30.1 0.1 48 331-380 18-66 (73)
102 3lrq_A E3 ubiquitin-protein li 46.3 1.9 6.5E-05 34.7 -2.1 47 332-381 21-68 (100)
103 2ecy_A TNF receptor-associated 45.0 2.6 8.8E-05 31.0 -1.4 47 331-380 13-59 (66)
104 1chc_A Equine herpes virus-1 r 42.1 2.4 8.1E-05 31.1 -2.0 45 333-381 5-50 (68)
105 4ayc_A E3 ubiquitin-protein li 41.7 3.1 0.00011 35.4 -1.6 43 333-380 53-96 (138)
106 2xeu_A Ring finger protein 4; 40.0 3.7 0.00013 29.4 -1.2 43 334-380 4-53 (64)
107 1n0z_A ZNF265; zinc finger, RN 39.3 16 0.00053 25.9 2.1 26 367-392 10-37 (45)
108 2ecj_A Tripartite motif-contai 38.9 7 0.00024 27.4 0.2 45 332-377 14-58 (58)
109 2yur_A Retinoblastoma-binding 36.2 5.7 0.0002 29.9 -0.7 49 330-380 12-61 (74)
110 2y9y_B IOC3, ISWI one complex 36.0 56 0.0019 34.9 6.4 56 183-238 52-142 (624)
111 2csy_A Zinc finger protein 183 34.8 3.6 0.00012 31.4 -2.1 45 332-381 14-59 (81)
112 2ct2_A Tripartite motif protei 34.5 3.9 0.00013 31.3 -1.9 49 331-381 13-66 (88)
113 1t1h_A Gspef-atpub14, armadill 33.1 5 0.00017 30.2 -1.5 46 331-380 6-52 (78)
114 2ecw_A Tripartite motif-contai 33.1 4.1 0.00014 30.7 -2.0 49 331-380 17-68 (85)
115 2ckl_A Polycomb group ring fin 32.8 4.4 0.00015 32.7 -2.0 47 331-381 13-60 (108)
116 2zet_C Melanophilin; complex, 32.4 17 0.00059 32.1 1.7 47 332-381 67-118 (153)
117 3fl2_A E3 ubiquitin-protein li 31.6 4.5 0.00015 33.5 -2.2 45 333-381 52-97 (124)
118 1jm7_B BARD1, BRCA1-associated 30.7 22 0.00074 29.0 2.0 43 333-381 22-65 (117)
119 1jm7_A BRCA1, breast cancer ty 29.7 6.5 0.00022 31.5 -1.4 48 333-381 21-68 (112)
120 2ecv_A Tripartite motif-contai 29.5 5.9 0.0002 29.8 -1.7 50 331-381 17-69 (85)
121 1weo_A Cellulose synthase, cat 28.4 6.7 0.00023 32.1 -1.5 47 332-381 15-68 (93)
122 4ap4_A E3 ubiquitin ligase RNF 28.1 4.3 0.00015 33.2 -2.9 45 332-380 71-122 (133)
123 2ysj_A Tripartite motif-contai 26.9 4.9 0.00017 29.0 -2.4 45 331-377 18-63 (63)
124 2d8v_A Zinc finger FYVE domain 26.1 27 0.00091 27.0 1.5 17 334-351 9-25 (67)
125 2ebv_A Nuclear pore complex pr 25.2 49 0.0017 24.7 2.8 28 364-391 24-51 (57)
126 2y43_A E3 ubiquitin-protein li 24.8 11 0.00038 29.7 -0.9 46 332-381 21-67 (99)
127 1zbd_B Rabphilin-3A; G protein 24.3 28 0.00097 30.0 1.6 50 332-381 54-108 (134)
128 3ztg_A E3 ubiquitin-protein li 24.2 17 0.00058 28.1 0.1 49 330-380 10-59 (92)
129 2a20_A Regulating synaptic mem 24.0 11 0.00037 28.7 -1.0 49 333-381 9-61 (62)
130 2ebr_A Nuclear pore complex pr 24.0 63 0.0022 23.1 3.1 29 365-393 5-33 (47)
131 2enn_A NPKC-theta, protein kin 23.2 36 0.0012 26.2 1.8 29 333-361 34-67 (77)
132 2ebq_A Nuclear pore complex pr 21.9 55 0.0019 23.5 2.4 28 366-393 6-33 (47)
133 1e4u_A Transcriptional repress 21.4 21 0.00071 27.6 0.1 46 332-381 10-60 (78)
134 2enz_A NPKC-theta, protein kin 21.4 43 0.0015 24.8 1.9 28 334-361 24-56 (65)
135 1faq_A RAF-1; transferase, ser 21.1 60 0.002 22.6 2.5 28 334-361 15-43 (52)
136 1z6u_A NP95-like ring finger p 21.0 9.5 0.00032 33.1 -2.2 45 333-381 78-123 (150)
137 3gj5_B Nuclear pore complex pr 20.7 37 0.0013 22.8 1.2 25 368-392 4-28 (34)
138 2yuu_A NPKC-delta, protein kin 20.2 40 0.0014 26.2 1.6 28 334-361 29-61 (83)
No 1
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=99.56 E-value=1.9e-15 Score=116.33 Aligned_cols=57 Identities=42% Similarity=1.162 Sum_probs=52.2
Q ss_pred CCccccccccccccCCeeEeCCCCCCccccccCCCCCCCCCCCCcccccccccccCC
Q psy5116 328 GGFQYDDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHKVTG 384 (422)
Q Consensus 328 ~~~~~dd~C~vC~~gG~ll~Cd~Cp~afHl~Cl~Ppl~~iP~g~W~C~~C~~~k~~g 384 (422)
+++.+++.|.+|+.+|+||+||.|+++||+.|++|++..+|.++|+|+.|.....+|
T Consensus 4 ~~d~~~~~C~vC~~~g~ll~Cd~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~~~~k~ 60 (61)
T 1mm2_A 4 GSDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTCPALKG 60 (61)
T ss_dssp CSCSSCSSCTTTCCCSSCBCCSSSCCCBCSSSSSSCCSSCCSSCCCCTTTTTTCCTT
T ss_pred cccCCCCcCCCCCCCCCEEEcCCCCHHHcccccCCCcCcCCCCccCChhhcCchhcC
Confidence 345678899999999999999999999999999999999999999999999887665
No 2
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=99.48 E-value=1.8e-14 Score=112.37 Aligned_cols=52 Identities=46% Similarity=1.257 Sum_probs=48.7
Q ss_pred cccccccccccCCeeEeCCCCCCccccccCCCCCCCCCCCCccccccccccc
Q psy5116 331 QYDDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHKV 382 (422)
Q Consensus 331 ~~dd~C~vC~~gG~ll~Cd~Cp~afHl~Cl~Ppl~~iP~g~W~C~~C~~~k~ 382 (422)
.+++.|.+|+.+|+||+||.|+++||+.|++||+..+|.++|+|+.|...+.
T Consensus 6 ~~~~~C~vC~~~g~ll~CD~C~~~fH~~Cl~ppl~~~P~g~W~C~~C~~~~~ 57 (66)
T 1xwh_A 6 KNEDECAVCRDGGELICCDGCPRAFHLACLSPPLREIPSGTWRCSSCLQATV 57 (66)
T ss_dssp SCCCSBSSSSCCSSCEECSSCCCEECTTTSSSCCSSCCSSCCCCHHHHHTCC
T ss_pred CCCCCCccCCCCCCEEEcCCCChhhcccccCCCcCcCCCCCeECccccCccc
Confidence 4778999999999999999999999999999999999999999999987654
No 3
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=99.47 E-value=3.6e-14 Score=116.89 Aligned_cols=53 Identities=42% Similarity=0.981 Sum_probs=49.2
Q ss_pred CccccccccccccCCeeEeCCCCCCccccccCCCCCCCCCCCCcccccccccc
Q psy5116 329 GFQYDDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHK 381 (422)
Q Consensus 329 ~~~~dd~C~vC~~gG~ll~Cd~Cp~afHl~Cl~Ppl~~iP~g~W~C~~C~~~k 381 (422)
...+++.|.+|+++|+||+||.|+++||+.|++|++..+|.|+|+|+.|....
T Consensus 21 ~d~n~~~C~vC~~~g~LL~CD~C~~~fH~~Cl~PpL~~~P~g~W~C~~C~~~~ 73 (88)
T 1fp0_A 21 LDDSATICRVCQKPGDLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVLP 73 (88)
T ss_dssp SSSSSSCCSSSCSSSCCEECTTSSCEECTTSSSTTCCCCCSSSCCCCSCCCCC
T ss_pred cCCCCCcCcCcCCCCCEEECCCCCCceecccCCCCCCCCcCCCcCCccccCCC
Confidence 45678899999999999999999999999999999999999999999998654
No 4
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.47 E-value=1.9e-14 Score=108.62 Aligned_cols=53 Identities=43% Similarity=1.151 Sum_probs=48.8
Q ss_pred cCCccccccccccccCCeeEeCCCCCCccccccCCCCCCCCCCCCcccccccc
Q psy5116 327 EGGFQYDDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKA 379 (422)
Q Consensus 327 e~~~~~dd~C~vC~~gG~ll~Cd~Cp~afHl~Cl~Ppl~~iP~g~W~C~~C~~ 379 (422)
++...+++.|.+|+.+|+||+||.|+++||+.|++||+..+|.++|+|+.|..
T Consensus 3 ~g~~~~~~~C~vC~~~g~ll~Cd~C~~~~H~~Cl~ppl~~~p~g~W~C~~C~~ 55 (56)
T 2yql_A 3 SGSSGHEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQD 55 (56)
T ss_dssp CCCCSSCCSCSSSCCSSCCEECSSSSCEECSSSSSSCCCSCCCSSCCCHHHHC
T ss_pred CCcCCCCCCCccCCCCCeEEEcCCCCcceECccCCCCcCCCCCCceEChhhhC
Confidence 34566788999999999999999999999999999999999999999999964
No 5
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=99.43 E-value=4.3e-14 Score=110.57 Aligned_cols=51 Identities=27% Similarity=0.625 Sum_probs=47.0
Q ss_pred cccccccccccCCeeEeCCCCCCccccccCCCCCCCCCCCCcccccccccc
Q psy5116 331 QYDDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHK 381 (422)
Q Consensus 331 ~~dd~C~vC~~gG~ll~Cd~Cp~afHl~Cl~Ppl~~iP~g~W~C~~C~~~k 381 (422)
.++..|.+|+++|+||+||.|+++||+.|++|++..+|.++|+|+.|....
T Consensus 10 ~~~~~C~vC~~~~~ll~Cd~C~~~~H~~Cl~P~l~~~P~g~W~C~~C~~~~ 60 (66)
T 2lri_C 10 APGARCGVCGDGTDVLRCTHCAAAFHWRCHFPAGTSRPGTGLRCRSCSGDV 60 (66)
T ss_dssp CTTCCCTTTSCCTTCEECSSSCCEECHHHHCTTTCCCCSSSCCCTTTTTCC
T ss_pred CCCCCcCCCCCCCeEEECCCCCCceecccCCCccCcCCCCCEECccccCCC
Confidence 355689999999999999999999999999999999999999999997653
No 6
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=99.42 E-value=5.4e-14 Score=108.16 Aligned_cols=52 Identities=35% Similarity=1.027 Sum_probs=48.0
Q ss_pred CccccccccccccCCeeEeCCCCCCccccccCCCCCCCCCCCCccccccccc
Q psy5116 329 GFQYDDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAH 380 (422)
Q Consensus 329 ~~~~dd~C~vC~~gG~ll~Cd~Cp~afHl~Cl~Ppl~~iP~g~W~C~~C~~~ 380 (422)
+..+++.|.+|+++|+||+||.|+++||+.|++|++..+|.++|+|+.|...
T Consensus 7 ~~~~~~~C~vC~~~g~ll~CD~C~~~fH~~Cl~p~l~~~p~g~W~C~~C~~~ 58 (61)
T 2l5u_A 7 ETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKE 58 (61)
T ss_dssp SSCCCSSCTTTSCCSSEEECSSSSCEEEHHHHCTTCCSCCCSSCCCTTGGGG
T ss_pred cCCCCCCCccCCCCCcEEECCCCChhhhhhccCCCCCCCCCCceECcccccc
Confidence 3456789999999999999999999999999999999999999999999764
No 7
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.41 E-value=6.7e-14 Score=116.04 Aligned_cols=70 Identities=34% Similarity=0.798 Sum_probs=58.4
Q ss_pred ccccccccccccCCe---eEeCCCCCCccccccCCCCCCCCCCCCcccccccccccCCcccCCchhhhccccccccccee
Q psy5116 330 FQYDDHCRVCHRVGE---LLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHKVTGVTDCLPDVEKSGLLCRQEHLGF 406 (422)
Q Consensus 330 ~~~dd~C~vC~~gG~---ll~Cd~Cp~afHl~Cl~Ppl~~iP~g~W~C~~C~~~k~~g~~dc~~~~ek~~~l~r~e~lg~ 406 (422)
..++..|.||+.+++ ||+||.|+++||+.|++||+..+|.++|+|+.|.....+ +.++.+|+
T Consensus 13 ~~~~~~C~vC~~~~~~~~ll~CD~C~~~~H~~Cl~Ppl~~~P~g~W~C~~C~~~~~~---------------~~~~~~Gf 77 (92)
T 2e6r_A 13 FIDSYICQVCSRGDEDDKLLFCDGCDDNYHIFCLLPPLPEIPRGIWRCPKCILAECK---------------QPPEAFGF 77 (92)
T ss_dssp CCCCCCCSSSCCSGGGGGCEECTTTCCEECSSSSSSCCSSCCSSCCCCHHHHHHHHS---------------CCSSCCSC
T ss_pred ccCCCCCccCCCcCCCCCEEEcCCCCchhccccCCCCcccCCCCCcCCccCcCcccc---------------CCccccCh
Confidence 346678999999764 999999999999999999999999999999999765321 23567788
Q ss_pred ecCCCeee
Q psy5116 407 DRAGRKYW 414 (422)
Q Consensus 407 Dr~gR~yw 414 (422)
+..++.|+
T Consensus 78 ~~~~~~y~ 85 (92)
T 2e6r_A 78 EQATQEYS 85 (92)
T ss_dssp CCCCCCCC
T ss_pred hhcCCcee
Confidence 88778775
No 8
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=99.41 E-value=6.9e-14 Score=106.93 Aligned_cols=51 Identities=43% Similarity=1.161 Sum_probs=47.5
Q ss_pred cccccccccccCCeeEeCCCCCCccccccCCCCCCCCCCCCcccccccccc
Q psy5116 331 QYDDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHK 381 (422)
Q Consensus 331 ~~dd~C~vC~~gG~ll~Cd~Cp~afHl~Cl~Ppl~~iP~g~W~C~~C~~~k 381 (422)
.+++.|.+|+++|+||+||.|+.+||+.|++||+..+|.++|+|+.|....
T Consensus 3 ~~~~~C~vC~~~g~ll~Cd~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~~~ 53 (60)
T 2puy_A 3 IHEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQDQM 53 (60)
T ss_dssp CCCSSCTTTCCCSSCEECSSSSCEECGGGSSSCCSSCCCSCCCCHHHHHHH
T ss_pred CCCCCCcCCCCCCcEEEcCCCCcCEECCcCCCCcCCCCCCceEChhccChh
Confidence 467899999999999999999999999999999999999999999997654
No 9
>3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A
Probab=99.39 E-value=1.8e-13 Score=125.63 Aligned_cols=52 Identities=46% Similarity=1.152 Sum_probs=48.8
Q ss_pred cccccccccccCCeeEeCCCCCCccccccCCCCCCCCCCCCccccccccccc
Q psy5116 331 QYDDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHKV 382 (422)
Q Consensus 331 ~~dd~C~vC~~gG~ll~Cd~Cp~afHl~Cl~Ppl~~iP~g~W~C~~C~~~k~ 382 (422)
.|+++|.+|+++|++|+||+|+++||+.|++|++..+|.|+|+|+.|.....
T Consensus 2 ~~~~~C~~C~~~g~ll~Cd~C~~~~H~~C~~p~l~~~p~~~W~C~~C~~~~~ 53 (184)
T 3o36_A 2 PNEDWCAVCQNGGELLCCEKCPKVFHLSCHVPTLTNFPSGEWICTFCRDLSK 53 (184)
T ss_dssp CSCSSCTTTCCCSSCEECSSSSCEECTTTSSSCCSSCCSSCCCCTTTSCSSS
T ss_pred CCCCccccCCCCCeeeecCCCCcccCccccCCCCCCCCCCCEECccccCccc
Confidence 4778999999999999999999999999999999999999999999987653
No 10
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A*
Probab=99.38 E-value=2.1e-13 Score=127.60 Aligned_cols=54 Identities=44% Similarity=1.056 Sum_probs=49.9
Q ss_pred CccccccccccccCCeeEeCCCCCCccccccCCCCCCCCCCCCccccccccccc
Q psy5116 329 GFQYDDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHKV 382 (422)
Q Consensus 329 ~~~~dd~C~vC~~gG~ll~Cd~Cp~afHl~Cl~Ppl~~iP~g~W~C~~C~~~k~ 382 (422)
.+.++++|.+|+++|++|+||+|+++||+.|++|++..+|.|+|+|+.|.....
T Consensus 3 ~d~~~~~C~~C~~~g~ll~Cd~C~~~~H~~Cl~p~l~~~p~~~W~C~~C~~~~~ 56 (207)
T 3u5n_A 3 DDPNEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFCRDIGK 56 (207)
T ss_dssp CCSSCSSBTTTCCCEEEEECSSSSCEECTTTSSSCCSSCCSSCCCCTTTSCSSS
T ss_pred CCCCCCCCCCCCCCCceEEcCCCCCccCCccCCCCCCCCCCCCEEeCceeCccc
Confidence 345788999999999999999999999999999999999999999999987653
No 11
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=99.28 E-value=9e-13 Score=102.11 Aligned_cols=51 Identities=24% Similarity=0.741 Sum_probs=45.7
Q ss_pred cccccccccccC-----CeeEeCCCCCCccccccCCCCCCC--C-CCCCcccccccccc
Q psy5116 331 QYDDHCRVCHRV-----GELLCCETCPAVFHLECVDPPLRD--V-PQEDWQCNLCKAHK 381 (422)
Q Consensus 331 ~~dd~C~vC~~g-----G~ll~Cd~Cp~afHl~Cl~Ppl~~--i-P~g~W~C~~C~~~k 381 (422)
.+++.|.+|+.+ ++||+||.|+.+||+.|++|++.. + |.++|+|+.|...+
T Consensus 4 ~~~~~C~vC~~~~~~~~~~ll~Cd~C~~~~H~~C~~p~l~~~~~~p~~~W~C~~C~~~~ 62 (66)
T 2yt5_A 4 GSSGVCTICQEEYSEAPNEMVICDKCGQGYHQLCHTPHIDSSVIDSDEKWLCRQCVFAT 62 (66)
T ss_dssp CCCCCBSSSCCCCCBTTBCEEECSSSCCEEETTTSSSCCCHHHHHSSCCCCCHHHHHTT
T ss_pred CCCCCCCCCCCCCCCCCCCEEECCCCChHHHhhhCCCcccccccCCCCCEECCCCcCcc
Confidence 467799999987 889999999999999999999876 4 89999999998764
No 12
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=99.27 E-value=1.3e-12 Score=96.52 Aligned_cols=45 Identities=42% Similarity=1.192 Sum_probs=41.6
Q ss_pred cccccccCC---eeEeCCCCCCccccccCCCCCCCCCCCCcccccccc
Q psy5116 335 HCRVCHRVG---ELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKA 379 (422)
Q Consensus 335 ~C~vC~~gG---~ll~Cd~Cp~afHl~Cl~Ppl~~iP~g~W~C~~C~~ 379 (422)
.|.+|++++ +||+||.|+++||+.|++|++..+|.++|+|+.|..
T Consensus 2 ~C~vC~~~~~~~~ll~Cd~C~~~~H~~Cl~p~l~~~P~g~W~C~~C~~ 49 (51)
T 1f62_A 2 RCKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEVPDGEWQCPACQP 49 (51)
T ss_dssp CCTTTCCSSCCSCCEECTTTCCEECHHHHCTTCCSCCSSCCSCTTTSC
T ss_pred CCCCCCCCCCCCCEEECCCCChhhCcccCCCCcCCCCCCcEECcCccc
Confidence 599998765 699999999999999999999999999999999965
No 13
>2ro1_A Transcription intermediary factor 1-beta; KAP, TIF, PHD finger, bromodomain, SUMO, acetylation, alternative splicing, metal-binding, nucleus; NMR {Homo sapiens}
Probab=99.26 E-value=2.4e-12 Score=119.34 Aligned_cols=49 Identities=45% Similarity=1.129 Sum_probs=46.6
Q ss_pred cccccccccCCeeEeCCCCCCccccccCCCCCCCCCCCCcccccccccc
Q psy5116 333 DDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHK 381 (422)
Q Consensus 333 dd~C~vC~~gG~ll~Cd~Cp~afHl~Cl~Ppl~~iP~g~W~C~~C~~~k 381 (422)
++.|.+|+.+|++|+||+|+++||+.|+.|++..+|.|+|+|+.|....
T Consensus 2 ~~~C~~C~~~g~ll~Cd~C~~~~H~~Cl~p~l~~~p~g~W~C~~C~~~~ 50 (189)
T 2ro1_A 2 ATICRVCQKPGDLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVLP 50 (189)
T ss_dssp CCCBTTTCCCSSCCCCTTTCCBCCSTTSTTCCSSCCCTTCCTTTTSCSC
T ss_pred CCcCccCCCCCceeECCCCCchhccccCCCCcccCCCCCCCCcCccCCC
Confidence 5689999999999999999999999999999999999999999998765
No 14
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=99.23 E-value=1.5e-12 Score=107.06 Aligned_cols=51 Identities=27% Similarity=0.807 Sum_probs=45.7
Q ss_pred cccccccccccC-----CeeEeCCCCCCccccccCCCCCCC----CCCCCcccccccccc
Q psy5116 331 QYDDHCRVCHRV-----GELLCCETCPAVFHLECVDPPLRD----VPQEDWQCNLCKAHK 381 (422)
Q Consensus 331 ~~dd~C~vC~~g-----G~ll~Cd~Cp~afHl~Cl~Ppl~~----iP~g~W~C~~C~~~k 381 (422)
+++..|.+|+.+ +.||+||.|+++||+.|++||+.. +|.++|+|+.|....
T Consensus 14 e~~~~C~vC~~~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~~~~~p~g~W~C~~C~~~~ 73 (88)
T 1wev_A 14 EMGLACVVCRQMTVASGNQLVECQECHNLYHQDCHKPQVTDKEVNDPRLVWYCARCTRQM 73 (88)
T ss_dssp HHCCSCSSSCCCCCCTTCCEEECSSSCCEEETTTSSSCCCHHHHHCTTCCCCCHHHHHHH
T ss_pred CCCCcCCCCCCCCCCCCCceEECCCCCCeEcCccCCCcccccccCCCCCCeeCccccchh
Confidence 356799999986 689999999999999999999984 899999999997654
No 15
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=99.21 E-value=4.4e-12 Score=104.33 Aligned_cols=51 Identities=27% Similarity=0.756 Sum_probs=45.7
Q ss_pred CccccccccccccCC-----eeEeCCCCCCccccccCCCCCCCCCCCCcccccccccc
Q psy5116 329 GFQYDDHCRVCHRVG-----ELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHK 381 (422)
Q Consensus 329 ~~~~dd~C~vC~~gG-----~ll~Cd~Cp~afHl~Cl~Ppl~~iP~g~W~C~~C~~~k 381 (422)
...+++.|.||+.++ +||+||.|+.+||+.|++|++ +|.|+|+|+.|....
T Consensus 21 ~~~~~~~C~vC~~~~s~~~~~ll~CD~C~~~fH~~Cl~p~~--vP~g~W~C~~C~~~~ 76 (88)
T 2l43_A 21 LIDEDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVPY--IPEGQWLCRHCLQSR 76 (88)
T ss_dssp CCCCCCCCSSCCSSSSCSEEEEEECSSSCCCCCHHHHTCSS--CCSSCCCCHHHHHHT
T ss_pred cCCCCCcCCcCCCCCCCCCCCEEECCCCCchhhcccCCCCc--cCCCceECccccCcc
Confidence 345778999999987 899999999999999999985 899999999998765
No 16
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens}
Probab=99.20 E-value=2e-12 Score=102.42 Aligned_cols=50 Identities=28% Similarity=0.800 Sum_probs=44.3
Q ss_pred ccccccccccccCC-----eeEeCCCCCCccccccCCCCCCCCCCCCcccccccccc
Q psy5116 330 FQYDDHCRVCHRVG-----ELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHK 381 (422)
Q Consensus 330 ~~~dd~C~vC~~gG-----~ll~Cd~Cp~afHl~Cl~Ppl~~iP~g~W~C~~C~~~k 381 (422)
..+++.|.+|++++ +||+||.|+.+||+.|++|+. +|+|+|+|+.|...+
T Consensus 13 ~~~~~~C~vC~~~~s~~~~~ll~CD~C~~~~H~~Cl~~~~--vP~g~W~C~~C~~~~ 67 (71)
T 2ku3_A 13 IDEDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVPY--IPEGQWLCRHCLQSR 67 (71)
T ss_dssp CCSSCSCSSSCCCCCCSSSCEEECSSSCCEEEHHHHTCSS--CCSSCCCCHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCEEECCCCCCccccccCCCCc--CCCCCcCCccCcCcC
Confidence 45678999999875 899999999999999999884 899999999998764
No 17
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.20 E-value=7.6e-12 Score=100.61 Aligned_cols=48 Identities=40% Similarity=0.985 Sum_probs=43.7
Q ss_pred cccccccccc---CCeeEeCCCCCCccccccCCCCCCCCCCC-Ccccccccc
Q psy5116 332 YDDHCRVCHR---VGELLCCETCPAVFHLECVDPPLRDVPQE-DWQCNLCKA 379 (422)
Q Consensus 332 ~dd~C~vC~~---gG~ll~Cd~Cp~afHl~Cl~Ppl~~iP~g-~W~C~~C~~ 379 (422)
.+..|.+|+. +++||+||.|+++||+.||+|||..+|.| +|+|+.|..
T Consensus 25 ~~c~C~vC~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~P~g~~W~C~~C~~ 76 (77)
T 2e6s_A 25 HSCSCRVCGGKHEPNMQLLCDECNVAYHIYCLNPPLDKVPEEEYWYCPSCKT 76 (77)
T ss_dssp SSSSCSSSCCCCCSTTEEECSSSCCEEETTSSSSCCSSCCCSSCCCCTTTCC
T ss_pred CCCCCcCcCCcCCCCCEEEcCCCCccccccccCCCccCCCCCCCcCCcCccC
Confidence 4558999985 67899999999999999999999999999 999999964
No 18
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B
Probab=99.17 E-value=1.1e-11 Score=97.85 Aligned_cols=46 Identities=39% Similarity=1.087 Sum_probs=41.8
Q ss_pred ccccccc---CCeeEeCCCCCCccccccCCCCCCCCCCC-Cccccccccc
Q psy5116 335 HCRVCHR---VGELLCCETCPAVFHLECVDPPLRDVPQE-DWQCNLCKAH 380 (422)
Q Consensus 335 ~C~vC~~---gG~ll~Cd~Cp~afHl~Cl~Ppl~~iP~g-~W~C~~C~~~ 380 (422)
.|.+|++ +++||+||.|+++||+.||+|||..+|.| +|+|+.|...
T Consensus 20 ~C~~C~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~P~g~~W~C~~C~~~ 69 (70)
T 3asl_A 20 ACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRND 69 (70)
T ss_dssp SBTTTCCCSCGGGEEECTTTCCEEEGGGSSSCCSSCCSSSCCCCTTTSCC
T ss_pred CCcCCCCcCCCCCEEEcCCCCCceecccCCCCcCCCCCCCCcCCcCccCc
Confidence 6778885 67899999999999999999999999999 9999999753
No 19
>2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A
Probab=99.14 E-value=1.5e-12 Score=115.92 Aligned_cols=73 Identities=26% Similarity=0.643 Sum_probs=57.4
Q ss_pred CccccccccccccCCeeEeCCCCCCccccccCCCCCC-----C--CCCCCcccccccccccCCcc-cCCchhhhcccccc
Q psy5116 329 GFQYDDHCRVCHRVGELLCCETCPAVFHLECVDPPLR-----D--VPQEDWQCNLCKAHKVTGVT-DCLPDVEKSGLLCR 400 (422)
Q Consensus 329 ~~~~dd~C~vC~~gG~ll~Cd~Cp~afHl~Cl~Ppl~-----~--iP~g~W~C~~C~~~k~~g~~-dc~~~~ek~~~l~r 400 (422)
++.++++|.+|+.||+|+|||.|+++||+.|++|++. . .|.++|+|+.|...+..+.. .|....++-..+.|
T Consensus 59 ~Dg~~d~C~vC~~GG~LlcCD~Cpr~Fh~~Cl~p~l~~~~l~~i~~p~~~W~C~~C~~~pl~~l~~~c~~~~~~~~~~~~ 138 (142)
T 2lbm_A 59 SDGMDEQCRWCAEGGNLICCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHPEPLLDLVTACNSVFENLEQLLQ 138 (142)
T ss_dssp TTSCBCSCSSSCCCSSEEECSSSCCEEEHHHHHHHTCHHHHHHHHTSTTCCCCTTTCCCTTHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCCeecccCCCCcEEeCCCCCCeeeHhhcCCCCChhhhhhcccCCCCCEeecccCccHHHHHHHHHHHHHHHHHHHh
Confidence 3557899999999999999999999999999999986 2 58999999999987765542 25445555444444
Q ss_pred c
Q psy5116 401 Q 401 (422)
Q Consensus 401 ~ 401 (422)
|
T Consensus 139 ~ 139 (142)
T 2lbm_A 139 Q 139 (142)
T ss_dssp C
T ss_pred c
Confidence 3
No 20
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=99.14 E-value=2.4e-11 Score=103.45 Aligned_cols=54 Identities=31% Similarity=0.776 Sum_probs=47.9
Q ss_pred ccCCccccccccccccCCeeEeCC--CCCCccccccCCCCCCCCCCCCcccccccccc
Q psy5116 326 HEGGFQYDDHCRVCHRVGELLCCE--TCPAVFHLECVDPPLRDVPQEDWQCNLCKAHK 381 (422)
Q Consensus 326 ~e~~~~~dd~C~vC~~gG~ll~Cd--~Cp~afHl~Cl~Ppl~~iP~g~W~C~~C~~~k 381 (422)
.+.+..++++|.+|+++|+||+|| .|+++||+.|++ |..+|.|+|+|+.|.+..
T Consensus 8 ~~~~~~~~~~C~~C~~~G~ll~CD~~~Cp~~fH~~Cl~--L~~~P~g~W~Cp~c~C~~ 63 (107)
T 4gne_A 8 TEPKQMHEDYCFQCGDGGELVMCDKKDCPKAYHLLCLN--LTQPPYGKWECPWHQCDE 63 (107)
T ss_dssp --CCCSSCSSCTTTCCCSEEEECCSTTCCCEECTGGGT--CSSCCSSCCCCGGGBCTT
T ss_pred CCCcCCCCCCCCcCCCCCcEeEECCCCCCcccccccCc--CCcCCCCCEECCCCCCCc
Confidence 355667889999999999999999 899999999999 899999999999998654
No 21
>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens}
Probab=99.07 E-value=5.6e-11 Score=95.60 Aligned_cols=45 Identities=42% Similarity=1.122 Sum_probs=40.2
Q ss_pred cccccccC---CeeEeCCCCCCccccccCCCCCCCCCCCC-cccccccc
Q psy5116 335 HCRVCHRV---GELLCCETCPAVFHLECVDPPLRDVPQED-WQCNLCKA 379 (422)
Q Consensus 335 ~C~vC~~g---G~ll~Cd~Cp~afHl~Cl~Ppl~~iP~g~-W~C~~C~~ 379 (422)
.|.+|+.. +++|+||.|+++||+.|++|||..+|.++ |+|+.|+.
T Consensus 28 ~C~vC~~~~d~~~ll~CD~C~~~yH~~Cl~PpL~~~P~g~~W~C~~C~~ 76 (77)
T 3shb_A 28 ACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRN 76 (77)
T ss_dssp SBTTTCCCSCGGGEEECTTTCCEEETTTSSSCCSSCCSSSCCCCTTTC-
T ss_pred cCCccCCCCCCcceeEeCCCCCccCcccCCCcccCCCCCCceECcCccc
Confidence 57777775 56999999999999999999999999998 99999975
No 22
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=99.03 E-value=8.1e-11 Score=112.01 Aligned_cols=48 Identities=38% Similarity=0.984 Sum_probs=39.9
Q ss_pred cccccccccc---CCeeEeCCCCCCccccccCCCCCCCCCCC-Ccccccccc
Q psy5116 332 YDDHCRVCHR---VGELLCCETCPAVFHLECVDPPLRDVPQE-DWQCNLCKA 379 (422)
Q Consensus 332 ~dd~C~vC~~---gG~ll~Cd~Cp~afHl~Cl~Ppl~~iP~g-~W~C~~C~~ 379 (422)
.+..|.+|+. +++||+||.|+.+||+.|++|||..+|.| +|+|+.|..
T Consensus 173 ~~c~C~vC~~~~~~~~lL~CD~C~~~yH~~CL~PPL~~vP~G~~W~Cp~C~~ 224 (226)
T 3ask_A 173 RVCACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRN 224 (226)
T ss_dssp TTTSCSSSCCCCC--CCEECSSSCCEECSCC--CCCCSCCSSSCCCCGGGC-
T ss_pred CCCCCcCCCCCCCCCCeEEcCCCCcceeCccCCCCcccCCCCCCCCCcCCcC
Confidence 3557999987 57899999999999999999999999999 999999965
No 23
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=99.00 E-value=1.6e-10 Score=98.47 Aligned_cols=45 Identities=38% Similarity=1.131 Sum_probs=41.5
Q ss_pred cccccccC----CeeEeCCCCCCccccccCCCCCCCCCCCCcccccccc
Q psy5116 335 HCRVCHRV----GELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKA 379 (422)
Q Consensus 335 ~C~vC~~g----G~ll~Cd~Cp~afHl~Cl~Ppl~~iP~g~W~C~~C~~ 379 (422)
.|.+|+.+ ++||+||.|+++||+.|++|++..+|+++|+|+.|+.
T Consensus 63 ~C~vC~~~~~~~~~ll~Cd~C~~~yH~~Cl~p~l~~~P~~~W~C~~C~~ 111 (112)
T 3v43_A 63 TCSSCRDQGKNADNMLFCDSCDRGFHMECCDPPLTRMPKGMWICQICRP 111 (112)
T ss_dssp CBTTTCCCCCTTCCCEECTTTCCEECGGGCSSCCSSCCSSCCCCTTTSC
T ss_pred ccccccCcCCCccceEEcCCCCCeeecccCCCCCCCCCCCCeECCCCCC
Confidence 68888875 4799999999999999999999999999999999975
No 24
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=98.95 E-value=2.1e-10 Score=98.21 Aligned_cols=47 Identities=32% Similarity=0.981 Sum_probs=42.6
Q ss_pred cccccccc---CCeeEeCCCCCCccccccCCCCCCCCCCCCccccccccc
Q psy5116 334 DHCRVCHR---VGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAH 380 (422)
Q Consensus 334 d~C~vC~~---gG~ll~Cd~Cp~afHl~Cl~Ppl~~iP~g~W~C~~C~~~ 380 (422)
..|.+|+. +++||+||.|+++||+.|++||+..+|.|+|+|+.|...
T Consensus 59 ~~C~~C~~~~~~~~ll~Cd~C~~~yH~~Cl~ppl~~~P~g~W~C~~C~~~ 108 (114)
T 2kwj_A 59 KSCILCGTSENDDQLLFCDDCDRGYHMYCLNPPVAEPPEGSWSCHLCWEL 108 (114)
T ss_dssp CCCTTTTCCTTTTTEEECSSSCCEEETTTSSSCCSSCCSSCCCCHHHHHH
T ss_pred CccCcccccCCCCceEEcCCCCccccccccCCCccCCCCCCeECccccch
Confidence 36888887 578999999999999999999999999999999999654
No 25
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=98.88 E-value=1.5e-09 Score=91.93 Aligned_cols=76 Identities=26% Similarity=0.602 Sum_probs=58.8
Q ss_pred ccccccccccccCCee---EeCCCCCCccccccCCCCCCCCCCCCccccccc-ccccCCcccCCchhhhcccccccccce
Q psy5116 330 FQYDDHCRVCHRVGEL---LCCETCPAVFHLECVDPPLRDVPQEDWQCNLCK-AHKVTGVTDCLPDVEKSGLLCRQEHLG 405 (422)
Q Consensus 330 ~~~dd~C~vC~~gG~l---l~Cd~Cp~afHl~Cl~Ppl~~iP~g~W~C~~C~-~~k~~g~~dc~~~~ek~~~l~r~e~lg 405 (422)
..+++.|.+|+++|++ |+|+.|+++||+.|+++++..++.+.|+|+.|. +.. |.... .-..+|-
T Consensus 4 ~~~~~~C~~C~~~g~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~W~C~~C~~C~~------C~~~~------~~~~ll~ 71 (111)
T 2ysm_A 4 GSSGANCAVCDSPGDLLDQFFCTTCGQHYHGMCLDIAVTPLKRAGWQCPECKVCQN------CKQSG------EDSKMLV 71 (111)
T ss_dssp CCCCSCBTTTCCCCCTTTSEECSSSCCEECTTTTTCCCCTTTSTTCCCTTTCCCTT------TCCCS------CCTTEEE
T ss_pred CCCCCCCcCCCCCCCCcCCeECCCCCCCcChHHhCCccccccccCccCCcCCcccc------cCccC------CCCCeeE
Confidence 3578899999999876 999999999999999999888888999999995 211 11110 0135778
Q ss_pred eecCCCeeeeee
Q psy5116 406 FDRAGRKYWFLS 417 (422)
Q Consensus 406 ~Dr~gR~yw~~~ 417 (422)
-|..+|.|+..|
T Consensus 72 Cd~C~~~yH~~C 83 (111)
T 2ysm_A 72 CDTCDKGYHTFC 83 (111)
T ss_dssp CSSSCCEEEGGG
T ss_pred CCCCCcHHhHHh
Confidence 888888887654
No 26
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=98.88 E-value=7.3e-10 Score=93.92 Aligned_cols=48 Identities=33% Similarity=0.982 Sum_probs=43.6
Q ss_pred ccccccccCCe---eEeCCCCCCccccccCCCCCCCCCCCCcccccccccc
Q psy5116 334 DHCRVCHRVGE---LLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHK 381 (422)
Q Consensus 334 d~C~vC~~gG~---ll~Cd~Cp~afHl~Cl~Ppl~~iP~g~W~C~~C~~~k 381 (422)
..|.+|+++++ +|.||.|+++||+.|++||+..+|.++|+|+.|...+
T Consensus 55 ~~C~~C~~~~~~~~ll~Cd~C~~~yH~~Cl~ppl~~~P~g~W~C~~C~~c~ 105 (111)
T 2ysm_A 55 KVCQNCKQSGEDSKMLVCDTCDKGYHTFCLQPVMKSVPTNGWKCKNCRICI 105 (111)
T ss_dssp CCCTTTCCCSCCTTEEECSSSCCEEEGGGSSSCCSSCCSSCCCCHHHHCCS
T ss_pred CcccccCccCCCCCeeECCCCCcHHhHHhcCCccccCCCCCcCCcCCcCcC
Confidence 36888988775 9999999999999999999999999999999997654
No 27
>3ql9_A Transcriptional regulator ATRX; zinc finger, transcription, lysine trimethylation, protein, histone-binding protein, transcription-structural complex; HET: M3L; 0.93A {Homo sapiens} PDB: 3qla_A* 3qlc_A 3qln_A 2jm1_A
Probab=98.87 E-value=8.2e-11 Score=103.22 Aligned_cols=57 Identities=26% Similarity=0.786 Sum_probs=48.8
Q ss_pred CccccccccccccCCeeEeCCCCCCccccccCCCCCC-----CC--CCCCcccccccccccCCc
Q psy5116 329 GFQYDDHCRVCHRVGELLCCETCPAVFHLECVDPPLR-----DV--PQEDWQCNLCKAHKVTGV 385 (422)
Q Consensus 329 ~~~~dd~C~vC~~gG~ll~Cd~Cp~afHl~Cl~Ppl~-----~i--P~g~W~C~~C~~~k~~g~ 385 (422)
++.++++|.+|++||+|+|||.|+++||..|+.|++. .+ |.+.|+|..|...++.+.
T Consensus 53 ~Dg~~~~C~vC~dGG~LlcCd~Cpr~Fc~~Cl~~~lg~~~l~~i~~~~~~W~C~~C~~~pl~~L 116 (129)
T 3ql9_A 53 SDGMDEQCRWCAEGGNLICCDFCHNAFCKKCILRNLGRRELSTIMDENNQWYCYICHPEPLLDL 116 (129)
T ss_dssp TTSCBSSCTTTCCCSEEEECSSSSCEEEHHHHHHHTCHHHHHHHTCTTSCCCCTTTCCGGGHHH
T ss_pred CCCCCCcCeecCCCCeeEecCCCchhhhHHHhCCCcchhHHHHhccCCCCeEcCCcCCHHHHHH
Confidence 3557889999999999999999999999999998853 43 789999999988775543
No 28
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=98.86 E-value=6e-10 Score=88.28 Aligned_cols=52 Identities=19% Similarity=0.477 Sum_probs=45.1
Q ss_pred ccccccccccccC---CeeEeCCCCCCccccccCCCCCCCCCCCCcccccccccc
Q psy5116 330 FQYDDHCRVCHRV---GELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHK 381 (422)
Q Consensus 330 ~~~dd~C~vC~~g---G~ll~Cd~Cp~afHl~Cl~Ppl~~iP~g~W~C~~C~~~k 381 (422)
..+..+|.+|++. +.+|+||.|+.+||+.|++++....|.++|+|+.|....
T Consensus 15 ~~~~~~C~~C~~~~~~~~mi~CD~C~~wfH~~Cv~~~~~~~~~~~w~C~~C~~~~ 69 (75)
T 2k16_A 15 GNQIWICPGCNKPDDGSPMIGCDDCDDWYHWPCVGIMAAPPEEMQWFCPKCANKI 69 (75)
T ss_dssp SCEEECBTTTTBCCSSCCEEECSSSSSEEEHHHHTCSSCCCSSSCCCCTTTHHHH
T ss_pred CCCCcCCCCCCCCCCCCCEEEcCCCCcccccccCCCCccCCCCCCEEChhccCch
Confidence 4456789999885 369999999999999999999888888999999997653
No 29
>1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A
Probab=98.74 E-value=8.7e-09 Score=81.47 Aligned_cols=47 Identities=34% Similarity=0.965 Sum_probs=41.0
Q ss_pred cccccccccc--CCeeEeCCC--CC-CccccccCCCCCCCCCCCCcccccccccc
Q psy5116 332 YDDHCRVCHR--VGELLCCET--CP-AVFHLECVDPPLRDVPQEDWQCNLCKAHK 381 (422)
Q Consensus 332 ~dd~C~vC~~--gG~ll~Cd~--Cp-~afHl~Cl~Ppl~~iP~g~W~C~~C~~~k 381 (422)
...+| +|++ .|.||+||. |+ .+||+.|++ |..+|.+.|+|+.|....
T Consensus 15 ~~~~C-~C~~~~~g~MI~CD~~~C~~~wfH~~Cvg--l~~~p~g~w~Cp~C~~~~ 66 (71)
T 1wen_A 15 EPTYC-LCHQVSYGEMIGCDNPDCSIEWFHFACVG--LTTKPRGKWFCPRCSQES 66 (71)
T ss_dssp SCCCS-TTCCCSCSSEECCSCSSCSCCCEETTTTT--CSSCCSSCCCCTTTSSCS
T ss_pred CCCEE-ECCCCCCCCEeEeeCCCCCCccEecccCC--cCcCCCCCEECCCCCccc
Confidence 44578 7988 689999999 88 699999999 788899999999997754
No 30
>3c6w_A P28ING5, inhibitor of growth protein 5; chromatin, PHD, ING, epigenetics, alternative splicing, metal-binding, phosphoprotein, zinc; HET: M3L; 1.75A {Homo sapiens} PDB: 2pnx_A*
Probab=98.67 E-value=6.8e-09 Score=79.25 Aligned_cols=45 Identities=40% Similarity=1.101 Sum_probs=39.6
Q ss_pred ccccccccc--CCeeEeCCC--CC-CccccccCCCCCCCCCCCCccccccccc
Q psy5116 333 DDHCRVCHR--VGELLCCET--CP-AVFHLECVDPPLRDVPQEDWQCNLCKAH 380 (422)
Q Consensus 333 dd~C~vC~~--gG~ll~Cd~--Cp-~afHl~Cl~Ppl~~iP~g~W~C~~C~~~ 380 (422)
..+| +|++ .|.||+||. |+ .+||+.|++ +...|.+.|+|+.|..+
T Consensus 9 ~~yC-~C~~~~~g~mi~CD~~~C~~~wfH~~Cvg--l~~~p~~~w~Cp~C~~~ 58 (59)
T 3c6w_A 9 PTYC-LCHQVSYGEMIGCDNPDCPIEWFHFACVD--LTTKPKGKWFCPRCVQE 58 (59)
T ss_dssp CEET-TTTEECCSEEEECSCTTCSSCEEETGGGT--CSSCCSSCCCCHHHHCC
T ss_pred CcEE-ECCCCCCCCeeEeeCCCCCCCCEecccCC--cccCCCCCEECcCccCc
Confidence 3467 8988 789999999 88 699999999 78889999999999764
No 31
>2vnf_A ING 4, P29ING4, inhibitor of growth protein 4; acetylation, alternative splicing, anti-oncogene, cell cycle, coiled C nucleus, zinc, zinc-finger, ING4; HET: M3L; 1.76A {Homo sapiens} SCOP: g.50.1.2 PDB: 2k1j_A 2jmq_A 2qic_A*
Probab=98.65 E-value=8.6e-09 Score=78.83 Aligned_cols=45 Identities=36% Similarity=1.027 Sum_probs=38.8
Q ss_pred ccccccccc--CCeeEeCCC--CC-CccccccCCCCCCCCCCCCccccccccc
Q psy5116 333 DDHCRVCHR--VGELLCCET--CP-AVFHLECVDPPLRDVPQEDWQCNLCKAH 380 (422)
Q Consensus 333 dd~C~vC~~--gG~ll~Cd~--Cp-~afHl~Cl~Ppl~~iP~g~W~C~~C~~~ 380 (422)
..+| +|++ .|.+|+||. |+ .+||+.|++ +..+|.+.|+|+.|..+
T Consensus 10 ~~~C-~C~~~~~g~mi~CD~cdC~~~wfH~~Cvg--l~~~p~g~w~C~~C~~~ 59 (60)
T 2vnf_A 10 PTYC-LCHQVSYGEMIGCDNPDCSIEWFHFACVG--LTTKPRGKWFCPRCSQE 59 (60)
T ss_dssp CEET-TTTEECCSEEEECSCTTCSSCEEETGGGT--CSSCCSSCCCCHHHHC-
T ss_pred CCEE-ECCCcCCCCEEEeCCCCCCCceEehhcCC--CCcCCCCCEECcCccCc
Confidence 4567 8988 689999999 77 799999999 78899999999999753
No 32
>1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2
Probab=98.65 E-value=2.3e-08 Score=82.77 Aligned_cols=47 Identities=34% Similarity=0.965 Sum_probs=40.6
Q ss_pred cccccccccc--CCeeEeCCC--CC-CccccccCCCCCCCCCCCCcccccccccc
Q psy5116 332 YDDHCRVCHR--VGELLCCET--CP-AVFHLECVDPPLRDVPQEDWQCNLCKAHK 381 (422)
Q Consensus 332 ~dd~C~vC~~--gG~ll~Cd~--Cp-~afHl~Cl~Ppl~~iP~g~W~C~~C~~~k 381 (422)
...+| +|++ .|.||+||. |+ .+||+.|++ |...|.+.|+|+.|....
T Consensus 35 e~~yC-iC~~~~~g~MI~CD~~dC~~~WfH~~CVg--l~~~p~g~W~Cp~C~~~~ 86 (91)
T 1weu_A 35 EPTYC-LCHQVSYGEMIGCDNPDCSIEWFHFACVG--LTTKPRGKWFCPRCSQES 86 (91)
T ss_dssp CCBCS-TTCCBCCSCCCCCSCSSCSCCCCCSTTTT--CSSCCCSSCCCTTTCCCC
T ss_pred CCcEE-ECCCCCCCCEeEecCCCCCCCCEecccCC--cCcCCCCCEECcCccCcC
Confidence 34578 9988 689999999 88 799999999 778889999999997754
No 33
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=98.61 E-value=2.3e-08 Score=83.48 Aligned_cols=46 Identities=24% Similarity=0.818 Sum_probs=38.8
Q ss_pred cccccccCCeeEeCCCCCCccccccCCCCCCCCCCCCcccccccccc
Q psy5116 335 HCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHK 381 (422)
Q Consensus 335 ~C~vC~~gG~ll~Cd~Cp~afHl~Cl~Ppl~~iP~g~W~C~~C~~~k 381 (422)
+|..|..+|.+|+||.|+.+||+.|++|++..+|+ .|+|+.|...+
T Consensus 32 iC~~~~~~~~mi~Cd~C~~w~H~~C~~~~~~~~p~-~w~C~~C~~~~ 77 (98)
T 2lv9_A 32 ICGFTHDDGYMICCDKCSVWQHIDCMGIDRQHIPD-TYLCERCQPRN 77 (98)
T ss_dssp TTSCCSCSSCEEEBTTTCBEEETTTTTCCTTSCCS-SBCCTTTSSSC
T ss_pred ECCCccCCCcEEEcCCCCCcCcCcCCCCCccCCCC-CEECCCCcCCC
Confidence 34445557889999999999999999999888885 89999997554
No 34
>2g6q_A Inhibitor of growth protein 2; protein-peptide complex, gene regulation, apoptosis; HET: M3L; 2.00A {Mus musculus}
Probab=98.60 E-value=1.6e-08 Score=77.96 Aligned_cols=45 Identities=36% Similarity=1.060 Sum_probs=39.2
Q ss_pred ccccccccc--CCeeEeCCC--CC-CccccccCCCCCCCCCCCCccccccccc
Q psy5116 333 DDHCRVCHR--VGELLCCET--CP-AVFHLECVDPPLRDVPQEDWQCNLCKAH 380 (422)
Q Consensus 333 dd~C~vC~~--gG~ll~Cd~--Cp-~afHl~Cl~Ppl~~iP~g~W~C~~C~~~ 380 (422)
..+| +|++ .|.+|+||. |+ .+||+.|++ +...|.+.|+|+.|...
T Consensus 11 ~~yC-~C~~~~~g~MI~CD~c~C~~~WfH~~Cvg--l~~~p~~~w~Cp~C~~~ 60 (62)
T 2g6q_A 11 PTYC-LCNQVSYGEMIGCDNEQCPIEWFHFSCVS--LTYKPKGKWYCPKCRGD 60 (62)
T ss_dssp CEET-TTTEECCSEEEECSCTTCSSCEEETGGGT--CSSCCSSCCCCHHHHTC
T ss_pred CcEE-ECCCCCCCCeeeeeCCCCCcccEecccCC--cCcCCCCCEECcCcccC
Confidence 4577 8988 789999999 76 999999999 67788899999999764
No 35
>2jmi_A Protein YNG1, ING1 homolog 1; PHD, histone, recognition, yeast, protein binding; NMR {Saccharomyces cerevisiae} PDB: 2jmj_A*
Probab=98.45 E-value=6.8e-08 Score=79.79 Aligned_cols=45 Identities=31% Similarity=0.885 Sum_probs=38.3
Q ss_pred cccccccccc--CCeeEeCCCCC---CccccccCCCCCCCCCCCCccccc-ccc
Q psy5116 332 YDDHCRVCHR--VGELLCCETCP---AVFHLECVDPPLRDVPQEDWQCNL-CKA 379 (422)
Q Consensus 332 ~dd~C~vC~~--gG~ll~Cd~Cp---~afHl~Cl~Ppl~~iP~g~W~C~~-C~~ 379 (422)
...+| +|++ .|+||+||.|. .+||+.|++ |...|.+.|+|+. |..
T Consensus 25 ~~~yC-iC~~~~~g~MI~CD~c~C~~eWfH~~CVg--l~~~p~~~W~Cp~cC~~ 75 (90)
T 2jmi_A 25 EEVYC-FCRNVSYGPMVACDNPACPFEWFHYGCVG--LKQAPKGKWYCSKDCKE 75 (90)
T ss_dssp CSCCS-TTTCCCSSSEECCCSSSCSCSCEETTTSS--CSSCTTSCCCSSHHHHH
T ss_pred CCcEE-EeCCCCCCCEEEecCCCCccccCcCccCC--CCcCCCCCccCChhhcc
Confidence 34578 8987 57899999955 899999999 7788889999999 964
No 36
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=98.26 E-value=2e-07 Score=79.63 Aligned_cols=73 Identities=27% Similarity=0.489 Sum_probs=52.3
Q ss_pred ccccccccC----------CeeEeCCCCCCccccccCCCCCC---CCCCCCcccccccccccCCcccCCchhhhcccccc
Q psy5116 334 DHCRVCHRV----------GELLCCETCPAVFHLECVDPPLR---DVPQEDWQCNLCKAHKVTGVTDCLPDVEKSGLLCR 400 (422)
Q Consensus 334 d~C~vC~~g----------G~ll~Cd~Cp~afHl~Cl~Ppl~---~iP~g~W~C~~C~~~k~~g~~dc~~~~ek~~~l~r 400 (422)
+.|.+|..+ ++||+|+.|+++||..|++++.. .++.+.|+|+.|..=. -|... ...
T Consensus 2 ~~C~~C~~~~~~n~k~g~~~~Li~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~~C~-----~C~~~------~~~ 70 (114)
T 2kwj_A 2 SYCDFCLGGSNMNKKSGRPEELVSCADCGRSGHPTCLQFTLNMTEAVKTYKWQCIECKSCI-----LCGTS------END 70 (114)
T ss_dssp CCCSSSCCBTTBCTTTCCCCCCEECSSSCCEECTTTTTCCHHHHHHHHHTTCCCGGGCCCT-----TTTCC------TTT
T ss_pred CcCccCCCCccccccCCCCCCCeEeCCCCCccchhhCCChhhhhhccCCCccCccccCccC-----ccccc------CCC
Confidence 468888654 47999999999999999997643 4678899999994211 12111 013
Q ss_pred cccceeecCCCeeeeee
Q psy5116 401 QEHLGFDRAGRKYWFLS 417 (422)
Q Consensus 401 ~e~lg~Dr~gR~yw~~~ 417 (422)
.++|--|...|.|+..|
T Consensus 71 ~~ll~Cd~C~~~yH~~C 87 (114)
T 2kwj_A 71 DQLLFCDDCDRGYHMYC 87 (114)
T ss_dssp TTEEECSSSCCEEETTT
T ss_pred CceEEcCCCCccccccc
Confidence 46788888888887655
No 37
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=98.03 E-value=2e-06 Score=65.83 Aligned_cols=50 Identities=22% Similarity=0.633 Sum_probs=39.2
Q ss_pred ccccccccccC----CeeEeCCCCCCccccccCCCCCCCCC-CCCcccccccccc
Q psy5116 332 YDDHCRVCHRV----GELLCCETCPAVFHLECVDPPLRDVP-QEDWQCNLCKAHK 381 (422)
Q Consensus 332 ~dd~C~vC~~g----G~ll~Cd~Cp~afHl~Cl~Ppl~~iP-~g~W~C~~C~~~k 381 (422)
+..+|.+|++. +.+|.||.|...||..|++....... ...|+|+.|..+.
T Consensus 5 e~~~C~~C~~~~~~~~~mI~Cd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~k~ 59 (64)
T 1we9_A 5 SSGQCGACGESYAADEFWICCDLCEMWFHGKCVKITPARAEHIKQYKCPSCSNKS 59 (64)
T ss_dssp SCCCCSSSCCCCCSSSCEEECSSSCCEEETTTTTCCTTGGGGCSSCCCHHHHTTT
T ss_pred CCCCCCCCCCccCCCCCEEEccCCCCCCCccccCcChhHhcCCCcEECCCCcCcC
Confidence 45579999873 56999999999999999995543332 2689999998754
No 38
>1x4i_A Inhibitor of growth protein 3; structural genomics, PHD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.96 E-value=1.9e-06 Score=67.80 Aligned_cols=44 Identities=34% Similarity=0.902 Sum_probs=36.5
Q ss_pred cccccccc--CCeeEeCCCCC---CccccccCCCCCCCCCCCCccccccccc
Q psy5116 334 DHCRVCHR--VGELLCCETCP---AVFHLECVDPPLRDVPQEDWQCNLCKAH 380 (422)
Q Consensus 334 d~C~vC~~--gG~ll~Cd~Cp---~afHl~Cl~Ppl~~iP~g~W~C~~C~~~ 380 (422)
.+|. |++ .|.+|.||.|. ..||+.|++ +...|.+.|+|+.|...
T Consensus 7 ~yC~-C~~~~~g~MI~CD~cdC~~~WfH~~Cvg--l~~~p~~~w~Cp~C~~~ 55 (70)
T 1x4i_A 7 GYCI-CNQVSYGEMVGCDNQDCPIEWFHYGCVG--LTEAPKGKWYCPQCTAA 55 (70)
T ss_dssp CCST-TSCCCCSSEECCSCTTCSCCCEEHHHHT--CSSCCSSCCCCHHHHHH
T ss_pred eEEE-cCCCCCCCEeEeCCCCCCccCCcccccc--cCcCCCCCEECCCCCcc
Confidence 3664 776 57899999974 899999999 66778899999999764
No 39
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=97.87 E-value=1.8e-06 Score=73.31 Aligned_cols=75 Identities=25% Similarity=0.453 Sum_probs=50.7
Q ss_pred cccccccccc---------CCeeEeCCCCCCccccccCCCC--C-CCCCCCCccccccc-ccccCCcccCCchhhhcccc
Q psy5116 332 YDDHCRVCHR---------VGELLCCETCPAVFHLECVDPP--L-RDVPQEDWQCNLCK-AHKVTGVTDCLPDVEKSGLL 398 (422)
Q Consensus 332 ~dd~C~vC~~---------gG~ll~Cd~Cp~afHl~Cl~Pp--l-~~iP~g~W~C~~C~-~~k~~g~~dc~~~~ek~~~l 398 (422)
+..+|.+|.. +++||.|+.|+++||.+|++.. + ..++.+.|+|+.|+ +.. |....+
T Consensus 4 p~~~C~~C~~~~~~~~~g~~~~Ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~~C~v------C~~~~~----- 72 (112)
T 3v43_A 4 PIPICSFCLGTKEQNREKKPEELISCADCGNSGHPSCLKFSPELTVRVKALRWQCIECKTCSS------CRDQGK----- 72 (112)
T ss_dssp CCSSBTTTCCCTTCCTTSCCCCCEECTTTCCEECHHHHTCCHHHHHHHHTSCCCCTTTCCBTT------TCCCCC-----
T ss_pred cCccccccCCchhhCcCCCchhceEhhhcCCCCCCchhcCCHHHHHHhhccccccccCCcccc------ccCcCC-----
Confidence 4567888855 3579999999999999999742 2 24678899999995 221 211100
Q ss_pred cccccceeecCCCeeeeee
Q psy5116 399 CRQEHLGFDRAGRKYWFLS 417 (422)
Q Consensus 399 ~r~e~lg~Dr~gR~yw~~~ 417 (422)
.-.++|--|...|.|+..|
T Consensus 73 ~~~~ll~Cd~C~~~yH~~C 91 (112)
T 3v43_A 73 NADNMLFCDSCDRGFHMEC 91 (112)
T ss_dssp TTCCCEECTTTCCEECGGG
T ss_pred CccceEEcCCCCCeeeccc
Confidence 1125667777777776554
No 40
>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}
Probab=97.85 E-value=7.6e-06 Score=63.99 Aligned_cols=45 Identities=27% Similarity=0.730 Sum_probs=36.6
Q ss_pred ccccccccC---CeeEeCCCCCCccccccCCCCCCCCCCCCccccccccc
Q psy5116 334 DHCRVCHRV---GELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAH 380 (422)
Q Consensus 334 d~C~vC~~g---G~ll~Cd~Cp~afHl~Cl~Ppl~~iP~g~W~C~~C~~~ 380 (422)
-+| +|++. +.+|.||.|...||..|++.....+| +.|+|+.|...
T Consensus 20 ~~C-iC~~~~~~~~MIqCd~C~~WfH~~Cvgi~~~~~~-~~~~C~~C~~s 67 (68)
T 3o70_A 20 VTC-FCMKPFAGRPMIECNECHTWIHLSCAKIRKSNVP-EVFVCQKCRDS 67 (68)
T ss_dssp CCS-TTCCCCTTCCEEECTTTCCEEETTTTTCCTTSCC-SSCCCHHHHTC
T ss_pred eEe-ECCCcCCCCCEEECCCCCccccccccCcCcccCC-CcEECCCCCCC
Confidence 467 88773 35999999999999999997655555 58999999754
No 41
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=97.81 E-value=3.3e-06 Score=68.66 Aligned_cols=54 Identities=26% Similarity=0.645 Sum_probs=44.9
Q ss_pred CCcccccccccccc--CCeeEeCCCCCCccccccCCCC------------CCCCCCCCcccccccccc
Q psy5116 328 GGFQYDDHCRVCHR--VGELLCCETCPAVFHLECVDPP------------LRDVPQEDWQCNLCKAHK 381 (422)
Q Consensus 328 ~~~~~dd~C~vC~~--gG~ll~Cd~Cp~afHl~Cl~Pp------------l~~iP~g~W~C~~C~~~k 381 (422)
+.+.+|+.|.||.. .+.++.|..|.++||..||-++ +...++.-|.|+.|....
T Consensus 10 e~~~~D~~C~VC~~~t~~~l~pCRvC~RvfH~~CL~r~gy~~~~~a~e~~l~A~T~~GWSC~~CenL~ 77 (89)
T 1wil_A 10 EPVVNDEMCDVCEVWTAESLFPCRVCTRVFHDGCLRRMGYIQGDSAAEVTEMAHTETGWSCHYCDNIN 77 (89)
T ss_dssp CCCCCSCCCTTTCCCCSSCCSSCSSSSSCCCHHHHHHHTSCCCCCCCSCSCCCSSSSSCCCTTTCCCC
T ss_pred cCCCCCcccCccccccccceeccccccccccHhhcccccccccHHHHHHHHccCCCCCccccccchhh
Confidence 35678999999984 7789999999999999999875 445667789999996543
No 42
>2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A*
Probab=97.69 E-value=3.3e-06 Score=76.29 Aligned_cols=49 Identities=18% Similarity=0.540 Sum_probs=37.7
Q ss_pred ccccccccccC----CeeEeCCCCCCccccccCCCCCCC-CCCCCcccccccccc
Q psy5116 332 YDDHCRVCHRV----GELLCCETCPAVFHLECVDPPLRD-VPQEDWQCNLCKAHK 381 (422)
Q Consensus 332 ~dd~C~vC~~g----G~ll~Cd~Cp~afHl~Cl~Ppl~~-iP~g~W~C~~C~~~k 381 (422)
+..+| +|+++ |.+|+||.|+.+||..|++..... ...+.|+|+.|....
T Consensus 7 ~~~~C-~C~~~~~~~~~mi~Cd~C~~WfH~~Cv~~~~~~~~~~~~~~C~~C~~~~ 60 (174)
T 2ri7_A 7 TKLYC-ICKTPEDESKFYIGCDRCQNWYHGRCVGILQSEAELIDEYVCPQCQSTE 60 (174)
T ss_dssp CCEET-TTTEECCTTSCEEECTTTCCEEEHHHHTCCHHHHTTCSSCCCHHHHHHH
T ss_pred CCcEe-eCCCCCCCCCCEeECCCCCchhChhhcCCchhhccCccCeecCCCcchh
Confidence 45679 99884 459999999999999999843222 224689999998654
No 43
>1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=97.69 E-value=1.8e-05 Score=62.09 Aligned_cols=50 Identities=22% Similarity=0.581 Sum_probs=37.7
Q ss_pred cccccccccccC---C-eeEeCCCCCCccccccCCCCCCCCCCCCcccccccccc
Q psy5116 331 QYDDHCRVCHRV---G-ELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHK 381 (422)
Q Consensus 331 ~~dd~C~vC~~g---G-~ll~Cd~Cp~afHl~Cl~Ppl~~iP~g~W~C~~C~~~k 381 (422)
....+| +|+.. | .+|.||.|...||..|++..........|+|+.|...+
T Consensus 14 ~~~~~C-~C~~~~~~g~~mI~Cd~C~~W~H~~Cvg~~~~~~~~~~~~C~~C~~~~ 67 (72)
T 1wee_A 14 NWKVDC-KCGTKDDDGERMLACDGCGVWHHTRCIGINNADALPSKFLCFRCIELS 67 (72)
T ss_dssp SSEECC-TTCCCSCCSSCEEECSSSCEEEETTTTTCCTTSCCCSCCCCHHHHHHC
T ss_pred CcceEe-eCCCccCCCCcEEECCCCCCccCCeeeccCccccCCCcEECCCccCCC
Confidence 344578 69874 4 59999999999999999965432233689999997654
No 44
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=97.68 E-value=9e-06 Score=68.63 Aligned_cols=48 Identities=29% Similarity=0.718 Sum_probs=37.7
Q ss_pred ccccccccC----CeeEeCC-CCCCccccccCCCCCC------CCCCCCcccccccccc
Q psy5116 334 DHCRVCHRV----GELLCCE-TCPAVFHLECVDPPLR------DVPQEDWQCNLCKAHK 381 (422)
Q Consensus 334 d~C~vC~~g----G~ll~Cd-~Cp~afHl~Cl~Ppl~------~iP~g~W~C~~C~~~k 381 (422)
..|.+|++. ++++.|| .|...||..|++-... ..|.+.|+|+.|....
T Consensus 4 ~~C~iC~~p~~~~~~mi~Cdd~C~~WfH~~CVglt~~~~~~i~~~~~~~~~Cp~C~~~~ 62 (105)
T 2xb1_A 4 YPCGACRSEVNDDQDAILCEASCQKWFHRECTGMTESAYGLLTTEASAVWACDLCLKTK 62 (105)
T ss_dssp CBCTTTCSBCCTTSCEEECTTTTCCEEEGGGTTCCHHHHHHHHHCTTEEECCHHHHHTT
T ss_pred CCCCCCCCccCCCCCEEEecCCcccccccccCCcCHHHHHhhccCCCCCEECccccCcC
Confidence 369999885 6788887 9999999999994321 1366789999998765
No 45
>1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=97.54 E-value=3.1e-05 Score=61.76 Aligned_cols=49 Identities=27% Similarity=0.680 Sum_probs=36.8
Q ss_pred ccccccccccC---CeeEeCC--CCCCccccccCCCCCCCC-----CCCCcccccccccc
Q psy5116 332 YDDHCRVCHRV---GELLCCE--TCPAVFHLECVDPPLRDV-----PQEDWQCNLCKAHK 381 (422)
Q Consensus 332 ~dd~C~vC~~g---G~ll~Cd--~Cp~afHl~Cl~Ppl~~i-----P~g~W~C~~C~~~k 381 (422)
+.-+| +|+.. |.+|.|| .|...||..|++-.-... ....|+|+.|...+
T Consensus 15 ~~~~C-iC~~~~~~g~MI~CD~~~C~~W~H~~CVgi~~~~~~~~~~~~~~~~C~~C~~~~ 73 (78)
T 1wew_A 15 IKVRC-VCGNSLETDSMIQCEDPRCHVWQHVGCVILPDKPMDGNPPLPESFYCEICRLTS 73 (78)
T ss_dssp CCCCC-SSCCCCCCSCEEECSSTTTCCEEEHHHHSCCCTTTCSCSCSCSSCCCHHHHHCC
T ss_pred CCEEe-ECCCcCCCCCEEEECCccCCccccCEEEccccccccccccCCCCEECCCCCccc
Confidence 34478 79874 7799999 999999999999443221 12489999998754
No 46
>1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2
Probab=97.52 E-value=1.3e-05 Score=63.53 Aligned_cols=49 Identities=27% Similarity=0.649 Sum_probs=36.8
Q ss_pred ccccccccccC---CeeEeCCCCCCccccccCCCCCCCC-----CCCCcccccccccc
Q psy5116 332 YDDHCRVCHRV---GELLCCETCPAVFHLECVDPPLRDV-----PQEDWQCNLCKAHK 381 (422)
Q Consensus 332 ~dd~C~vC~~g---G~ll~Cd~Cp~afHl~Cl~Ppl~~i-----P~g~W~C~~C~~~k 381 (422)
+..+| +|++. +.+|.||.|...||..|++...... ....|+|+.|....
T Consensus 15 ~~~~C-~C~~~~~~~~MI~Cd~C~~WfH~~Cvgl~~~~~~~l~~~~~~~~C~~C~~~~ 71 (76)
T 1wem_A 15 NALYC-ICRQPHNNRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCTILS 71 (76)
T ss_dssp TCCCS-TTCCCCCSSCEEECSSSCCEEEHHHHSCCHHHHHHHHHHTCCCCCHHHHHHS
T ss_pred CCCEE-ECCCccCCCCEEEeCCCCCcEeCeEEccchhhhhhccCCCCeEECcCCcCcc
Confidence 44577 79884 5799999999999999999432210 24689999997654
No 47
>2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A*
Probab=97.42 E-value=1.3e-05 Score=62.12 Aligned_cols=47 Identities=23% Similarity=0.607 Sum_probs=35.9
Q ss_pred ccccccccccC----CeeEeCC-CCCCccccccCCCCCC------CCCCCCccccccc
Q psy5116 332 YDDHCRVCHRV----GELLCCE-TCPAVFHLECVDPPLR------DVPQEDWQCNLCK 378 (422)
Q Consensus 332 ~dd~C~vC~~g----G~ll~Cd-~Cp~afHl~Cl~Ppl~------~iP~g~W~C~~C~ 378 (422)
....|.+|++. ..+|.|| .|...||..|++-... .-|.+.|+|+.|.
T Consensus 7 ~~~~C~~C~~p~~~~~~mI~CD~~C~~WfH~~Cvglt~~~~~~l~~e~~~~w~C~~C~ 64 (65)
T 2vpb_A 7 PVYPCGICTNEVNDDQDAILCEASCQKWFHRICTGMTETAYGLLTAEASAVWGCDTCM 64 (65)
T ss_dssp --CBCTTTCSBCCTTSCEEEBTTTTCCEEEHHHHTCCHHHHHHHHHCTTEEECCHHHH
T ss_pred CcCcCccCCCccCCCCCeEecccCccccCchhccCCCHHHHHHhhccCCCcEECcCcc
Confidence 44579999884 3599999 9999999999993321 1367799999996
No 48
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=97.38 E-value=3.8e-05 Score=61.31 Aligned_cols=47 Identities=23% Similarity=0.516 Sum_probs=35.6
Q ss_pred ccccccccC----CeeEeCCCCCCccccccCCCCCCCCC-CCCcccccccccc
Q psy5116 334 DHCRVCHRV----GELLCCETCPAVFHLECVDPPLRDVP-QEDWQCNLCKAHK 381 (422)
Q Consensus 334 d~C~vC~~g----G~ll~Cd~Cp~afHl~Cl~Ppl~~iP-~g~W~C~~C~~~k 381 (422)
.+| +|++. +.+|.||.|...||..|++-...... ...|+|+.|....
T Consensus 13 ~~C-~C~~~~d~~~~MIqCd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~~~ 64 (79)
T 1wep_A 13 VYC-LCRQPYNVNHFMIECGLCQDWFHGSCVGIEEENAVDIDIYHCPDCEAVF 64 (79)
T ss_dssp CCS-TTSCSCCSSSCEEEBTTTCCEEEHHHHTCCHHHHTTCSBBCCTTTTTTS
T ss_pred cEE-EcCCccCCCCceEEcCCCCCcEEeeecCcccccccCCCeEECCCccccc
Confidence 467 78773 56999999999999999994332221 2589999998764
No 49
>2kgg_A Histone demethylase jarid1A; PHD finger, histone modification, leukemia, alternative splicing, chromatin regulator, developmental protein; NMR {Homo sapiens} PDB: 2kgi_A* 3gl6_A*
Probab=97.13 E-value=6.1e-05 Score=55.60 Aligned_cols=43 Identities=28% Similarity=0.625 Sum_probs=31.4
Q ss_pred ccccccC----CeeEeCC-CCCCccccccCCCCCCCCCCCCccccccc
Q psy5116 336 CRVCHRV----GELLCCE-TCPAVFHLECVDPPLRDVPQEDWQCNLCK 378 (422)
Q Consensus 336 C~vC~~g----G~ll~Cd-~Cp~afHl~Cl~Ppl~~iP~g~W~C~~C~ 378 (422)
|.+|++. +.+|.|| .|...||..|++-.........|+|+.|+
T Consensus 5 cc~C~~p~~~~~~mI~Cd~~C~~WfH~~Cvgl~~~~~~~~~~~C~~C~ 52 (52)
T 2kgg_A 5 AQNCQRPCKDKVDWVQCDGGCDEWFHQVCVGVSPEMAENEDYICINCA 52 (52)
T ss_dssp CTTCCCCCCTTCCEEECTTTTCCEEETTTTTCCHHHHHHSCCCCSCC-
T ss_pred CCCCcCccCCCCcEEEeCCCCCccCcccccCCCccccCCCCEECCCCC
Confidence 6677663 3599999 89999999999943222113689999994
No 50
>3o7a_A PHD finger protein 13 variant; PHF13, zinc finger, PHD domain, nuclear protein, structural structural genomics consortium, SGC, protein binding; HET: M3L; 1.67A {Homo sapiens}
Probab=97.06 E-value=0.00022 Score=52.48 Aligned_cols=41 Identities=27% Similarity=0.724 Sum_probs=32.8
Q ss_pred cccc---CCeeEeCCCCCCccccccCCCCCCCCCCCCcccccccc
Q psy5116 338 VCHR---VGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKA 379 (422)
Q Consensus 338 vC~~---gG~ll~Cd~Cp~afHl~Cl~Ppl~~iP~g~W~C~~C~~ 379 (422)
+|++ ++.+|.||.|...||..|++.....+| +.|+|+.|..
T Consensus 8 ~C~~~~~~~~MI~Cd~C~~W~H~~Cvgi~~~~~~-~~~~C~~C~~ 51 (52)
T 3o7a_A 8 FCMKPFAGRPMIECNECHTWIHLSCAKIRKSNVP-EVFVCQKCRD 51 (52)
T ss_dssp TTCCBCTTCCEEECTTTCCEEETTTTTCCGGGCC-SSCCCHHHHT
T ss_pred EeCCcCCCCCEEEcCCCCccccccccCCCcccCC-CcEECcCCCC
Confidence 4655 457999999999999999996654444 5899999963
No 51
>2rsd_A E3 SUMO-protein ligase SIZ1; E3 SUMO ligase, plant homeodomain (PHD), histone binding; NMR {Oryza sativa japonica group}
Probab=96.80 E-value=0.00054 Score=53.10 Aligned_cols=44 Identities=34% Similarity=0.877 Sum_probs=32.4
Q ss_pred ccccccc---CCeeEeCCC--CCCccccccCCCCCC-----CCCCCCccccccccc
Q psy5116 335 HCRVCHR---VGELLCCET--CPAVFHLECVDPPLR-----DVPQEDWQCNLCKAH 380 (422)
Q Consensus 335 ~C~vC~~---gG~ll~Cd~--Cp~afHl~Cl~Ppl~-----~iP~g~W~C~~C~~~ 380 (422)
.| +|+. .|.+|.||. |...||..|++-.-. .+| ..|+|+.|+..
T Consensus 12 ~C-~C~~~~~~g~mI~CD~~~C~~W~H~~Cvgi~~~~~~~~~~p-~~~~C~~Cr~~ 65 (68)
T 2rsd_A 12 RC-ICSSTMVNDSMIQCEDQRCQVWQHLNCVLIPDKPGESAEVP-PVFYCELCRLS 65 (68)
T ss_dssp CC-TTCCCSCCSCEEECSCTTTCEEEETTTSCCCSSTTSCCCCC-SSCCCHHHHHH
T ss_pred Ee-ECCCCcCCCCEEEECCCCCCCeEchhhCCCCcccccccCCC-CcEECcCccCc
Confidence 46 6865 478999995 999999999984221 111 36999999754
No 52
>3kqi_A GRC5, PHD finger protein 2; metal-binding, zinc-finger, histone-binding, NUC protein; HET: M3L; 1.78A {Homo sapiens} SCOP: g.50.1.2
Probab=96.67 E-value=0.00036 Score=55.06 Aligned_cols=46 Identities=26% Similarity=0.709 Sum_probs=35.0
Q ss_pred ccccccc----CCeeEeCCCCCCccccccCCCCCCCCCC-CCcccccccccc
Q psy5116 335 HCRVCHR----VGELLCCETCPAVFHLECVDPPLRDVPQ-EDWQCNLCKAHK 381 (422)
Q Consensus 335 ~C~vC~~----gG~ll~Cd~Cp~afHl~Cl~Ppl~~iP~-g~W~C~~C~~~k 381 (422)
+| +|+. ++.+|.||.|...||..|++......+. ..|+|+.|....
T Consensus 12 yC-iC~~~~~~~~~MI~Cd~C~~WfH~~Cvg~~~~~~~~~~~~~C~~C~~~~ 62 (75)
T 3kqi_A 12 YC-VCRLPYDVTRFMIECDACKDWFHGSCVGVEEEEAPDIDIYHCPNCEKTH 62 (75)
T ss_dssp ET-TTTEECCTTSCEEECTTTCCEEEHHHHTCCTTTGGGBSSCCCHHHHHHH
T ss_pred EE-ECCCcCCCCCCEEEcCCCCCCEecccccccccccCCCCEEECCCCcccC
Confidence 44 6766 3469999999999999999954443333 579999997654
No 53
>3a1b_A DNA (cytosine-5)-methyltransferase 3A, histone H3; zinc-finger, histone binding, chromosomal protein, DNA damag repair, DNA-binding, methylation; HET: DNA; 2.29A {Homo sapiens} PDB: 3a1a_A*
Probab=96.39 E-value=0.00057 Score=61.75 Aligned_cols=55 Identities=29% Similarity=0.779 Sum_probs=43.5
Q ss_pred cccccccccccCCeeEeCC--CCCCccccccCCCCCCC------CCCCCcccccccccccCCc
Q psy5116 331 QYDDHCRVCHRVGELLCCE--TCPAVFHLECVDPPLRD------VPQEDWQCNLCKAHKVTGV 385 (422)
Q Consensus 331 ~~dd~C~vC~~gG~ll~Cd--~Cp~afHl~Cl~Ppl~~------iP~g~W~C~~C~~~k~~g~ 385 (422)
-.+.+|.+|+.||+|++|+ .|+++|-..|+.-.+.. +....|.|-.|...+..+.
T Consensus 77 G~~~yC~wC~~Gg~l~~Cdn~~C~r~FC~~CI~~nvG~~~~~~i~~~d~W~Cy~C~P~~l~~l 139 (159)
T 3a1b_A 77 GYQSYCTICCGGREVLMCGNNNCCRCFCVECVDLLVGPGAAQAAIKEDPWNCYMCGHKGTYGL 139 (159)
T ss_dssp SSBSSCTTTSCCSEEEECSSTTTCCEEEHHHHHHHTCTTHHHHHHTSSSCCCTTTCSSCEETT
T ss_pred CCcceeeEecCCCeEEeeCCCCCCCchhHHHHHHhcCHhHHHHHhccCCCEEEecCCccHHHH
Confidence 3567999999999999999 89999999998743321 3456799999987664443
No 54
>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A
Probab=96.27 E-value=0.0015 Score=60.25 Aligned_cols=49 Identities=18% Similarity=0.653 Sum_probs=36.2
Q ss_pred ccccccccC---C----eeEeCCCCCCccccccCCCCCC------CCCC-CCccccccccccc
Q psy5116 334 DHCRVCHRV---G----ELLCCETCPAVFHLECVDPPLR------DVPQ-EDWQCNLCKAHKV 382 (422)
Q Consensus 334 d~C~vC~~g---G----~ll~Cd~Cp~afHl~Cl~Ppl~------~iP~-g~W~C~~C~~~k~ 382 (422)
.+|.+|++. + .+|.||.|...||..|++..-. ..|+ ..|+|+.|.....
T Consensus 3 ~~CpiC~k~Y~~~~~~~~MIqCd~C~~W~H~~Cvgi~~~~~e~~~~~pe~~~y~Cp~C~~~~~ 65 (183)
T 3lqh_A 3 NFCPLCDKCYDDDDYESKMMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCTERHP 65 (183)
T ss_dssp CBCTTTCCBCTTCCTTCCEEECTTTCCEEEGGGSSCCHHHHHHHHHSHHHHCCCCTTTCCSSS
T ss_pred CcCCCCcCccCCcccCCCeEECCCCCcccchhccccCHHHHHHhhcCCCCCeeECcCCCCCCC
Confidence 368888773 3 3999999999999999984321 1232 3799999987653
No 55
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=96.26 E-value=0.00057 Score=71.62 Aligned_cols=47 Identities=23% Similarity=0.574 Sum_probs=34.8
Q ss_pred cccccccc----CCeeEeCCCCCCccccccCCCCCCCCCC-CCcccccccccc
Q psy5116 334 DHCRVCHR----VGELLCCETCPAVFHLECVDPPLRDVPQ-EDWQCNLCKAHK 381 (422)
Q Consensus 334 d~C~vC~~----gG~ll~Cd~Cp~afHl~Cl~Ppl~~iP~-g~W~C~~C~~~k 381 (422)
.+| +|++ ++.+|.||.|...||..|++-.-..... +.|+|+.|....
T Consensus 38 ~yC-~C~~~~d~~~~MIqCd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~~~ 89 (488)
T 3kv5_D 38 VYC-VCRQPYDVNRFMIECDICKDWFHGSCVGVEEHHAVDIDLYHCPNCAVLH 89 (488)
T ss_dssp EET-TTTEECCTTSCEEEBTTTCCEEEHHHHTCCGGGGGGEEEBCCHHHHHHH
T ss_pred eEE-eCCCcCCCCCCeEEccCCCCceeeeecCcCcccccCCCEEECCCCcCCc
Confidence 356 8877 4569999999999999999843222222 479999997543
No 56
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=95.81 E-value=0.0029 Score=66.72 Aligned_cols=37 Identities=22% Similarity=0.600 Sum_probs=28.7
Q ss_pred eeEeCCCCCCccccccCCCCCCCCC-CCCccccccccc
Q psy5116 344 ELLCCETCPAVFHLECVDPPLRDVP-QEDWQCNLCKAH 380 (422)
Q Consensus 344 ~ll~Cd~Cp~afHl~Cl~Ppl~~iP-~g~W~C~~C~~~ 380 (422)
.+|+||.|...||..|++-.-.... .+.|+||.|...
T Consensus 57 ~mI~CD~C~~WfH~~CVgi~~~~a~~~~~y~Cp~C~~~ 94 (528)
T 3pur_A 57 QWIGCDSCQTWYHFLCSGLEQFEYYLYEKFFCPKCVPH 94 (528)
T ss_dssp SEEECTTTCCEEEGGGTTCCGGGTTTEEECCCTTTHHH
T ss_pred CEEECCCCCcCCCCcCCCCChhHhcCCCeEECcCCcCC
Confidence 5899999999999999994432222 257999999764
No 57
>2pv0_B DNA (cytosine-5)-methyltransferase 3-like; DNMT3L, unmethylated H3K4, de novo DNA methylation, transferase regulator; HET: DNA; 3.30A {Homo sapiens} PDB: 2pvc_B*
Probab=95.68 E-value=0.00097 Score=67.93 Aligned_cols=56 Identities=29% Similarity=0.710 Sum_probs=43.4
Q ss_pred ccccccccccccCCeeEeCC--CCCCccccccCCCCCC------CCCCCCcccccccccccCCc
Q psy5116 330 FQYDDHCRVCHRVGELLCCE--TCPAVFHLECVDPPLR------DVPQEDWQCNLCKAHKVTGV 385 (422)
Q Consensus 330 ~~~dd~C~vC~~gG~ll~Cd--~Cp~afHl~Cl~Ppl~------~iP~g~W~C~~C~~~k~~g~ 385 (422)
+..+.+|.+|+.||++++|| .|+++|...|+.-.+. ......|.|-.|...+..+.
T Consensus 90 DG~~~yCr~C~~Gg~l~~Cdn~~C~r~FC~~Ci~~n~g~~~~~~i~~~d~W~Cf~C~p~p~~~l 153 (386)
T 2pv0_B 90 DGYQSYCSICCSGETLLICGNPDCTRCYCFECVDSLVGPGTSGKVHAMSNWVCYLCLPSSRSGL 153 (386)
T ss_dssp SSSBCSCTTTCCCSSCEECCSTTCCCEECHHHHHHHTCTTHHHHHHHCSSCCCTTTSSCCEETT
T ss_pred CCCcccceEcCCCCeEEEeCCCCCCcchHHHHHHHhcChhHHHHhhccCCceEEEcCCcchHhh
Confidence 34567999999999999999 9999999999974331 12235799999987764444
No 58
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=94.89 E-value=0.0022 Score=66.49 Aligned_cols=46 Identities=20% Similarity=0.528 Sum_probs=33.8
Q ss_pred cccccc----CCeeEeCCCCCCccccccCCCCCCCCCC-CCcccccccccc
Q psy5116 336 CRVCHR----VGELLCCETCPAVFHLECVDPPLRDVPQ-EDWQCNLCKAHK 381 (422)
Q Consensus 336 C~vC~~----gG~ll~Cd~Cp~afHl~Cl~Ppl~~iP~-g~W~C~~C~~~k 381 (422)
..+|++ +|.+|+||.|...||..|++-.-..... +.|+|+.|....
T Consensus 7 yCiC~~~~d~~~~MIqCD~C~~WfH~~CVgi~~~~~~~~~~y~C~~C~~~~ 57 (447)
T 3kv4_A 7 YCLCRLPYDVTRFMIECDMCQDWFHGSCVGVEEEKAADIDLYHCPNCEVLH 57 (447)
T ss_dssp ETTTTEECCTTSCEEECTTTCCEEEHHHHTCCHHHHTTEEECCCHHHHHHH
T ss_pred EEeCCCcCCCCCCeEEcCCCCcccccccCCcCcccccCCCEEECCCCcccc
Confidence 337766 4679999999999999999843222222 579999997543
No 59
>4bbq_A Lysine-specific demethylase 2A; oxidoreductase, ubiquitin, ligase, ubiquitination, demethyla ZF-CXXC DNA binding domain, CPG island, chromatin; 2.24A {Homo sapiens}
Probab=94.68 E-value=0.012 Score=49.44 Aligned_cols=37 Identities=24% Similarity=0.643 Sum_probs=29.2
Q ss_pred eeEeCCCCCCccccccCCCCCCCCCCC----Cccccccccc
Q psy5116 344 ELLCCETCPAVFHLECVDPPLRDVPQE----DWQCNLCKAH 380 (422)
Q Consensus 344 ~ll~Cd~Cp~afHl~Cl~Ppl~~iP~g----~W~C~~C~~~ 380 (422)
.|+.|+.|...||..|+++....+++. .|.|+.|...
T Consensus 74 ~m~~C~~C~~~~H~~C~~~~~~~~~~~~~~~~~~C~~C~~~ 114 (117)
T 4bbq_A 74 KLMECCICNEIVHPGCLQMDGEGLLNEELPNCWECPKCYQE 114 (117)
T ss_dssp SCEEETTTCCEECGGGCCSCCCCEECSSSSSEEECTTTC--
T ss_pred ceEEeeecCCeEECCCCCCCccccccccCCCCeECCCCcCC
Confidence 488999999999999999876554443 4999999764
No 60
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=94.19 E-value=0.02 Score=48.41 Aligned_cols=39 Identities=26% Similarity=0.521 Sum_probs=34.4
Q ss_pred cccccccCCeeEeCCCCCCccccccCCCCCCCCCCCCccc
Q psy5116 335 HCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQC 374 (422)
Q Consensus 335 ~C~vC~~gG~ll~Cd~Cp~afHl~Cl~Ppl~~iP~g~W~C 374 (422)
.|.+|++... +.|..||.+||..|+++.|...+.+-|+|
T Consensus 60 ~C~~C~k~~~-~~C~~Cp~sfC~~c~~g~l~~~~~~~~~c 98 (107)
T 4gne_A 60 QCDECSSAAV-SFCEFCPHSFCKDHEKGALVPSALEGRLC 98 (107)
T ss_dssp BCTTTCSBCC-EECSSSSCEECTTTCTTSCEECTTTTCEE
T ss_pred CCCcCCCCCC-cCcCCCCcchhhhccCCcceecCCCCcee
Confidence 5777877665 78999999999999999999888889988
No 61
>2ku7_A MLL1 PHD3-CYP33 RRM chimeric protein; transcriptional regulation, RRM domain, transcr; NMR {Homo sapiens}
Probab=92.01 E-value=0.036 Score=46.46 Aligned_cols=37 Identities=19% Similarity=0.602 Sum_probs=28.8
Q ss_pred eEeCCCCCCccccccCCCCC------CCCCC-CCcccccccccc
Q psy5116 345 LLCCETCPAVFHLECVDPPL------RDVPQ-EDWQCNLCKAHK 381 (422)
Q Consensus 345 ll~Cd~Cp~afHl~Cl~Ppl------~~iP~-g~W~C~~C~~~k 381 (422)
+|.||.|..+||..|.+-.- ..+|+ ..|.|+.|....
T Consensus 2 mi~c~~c~~w~H~~c~~~~~~~~~~l~~lp~~~~~~c~~C~~~~ 45 (140)
T 2ku7_A 2 MMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCTERH 45 (140)
T ss_dssp CCCCSCCSSCHHHHHCCCCHHHHHHHHSSCTTTTCCSSCCTTTS
T ss_pred ccccccCCCccCCcccccCHHHHHHHhhccccceeeCccccccc
Confidence 68999999999999998432 34453 479999998654
No 62
>3rsn_A SET1/ASH2 histone methyltransferase complex subun; PHD domain, winged helix domain, binding, transcription; 2.10A {Homo sapiens} PDB: 3s32_A
Probab=85.20 E-value=0.58 Score=42.82 Aligned_cols=43 Identities=19% Similarity=0.410 Sum_probs=30.5
Q ss_pred cccCCe----eEeCCCCCCccccccCCCCCCC-CCC---CCcccccccccc
Q psy5116 339 CHRVGE----LLCCETCPAVFHLECVDPPLRD-VPQ---EDWQCNLCKAHK 381 (422)
Q Consensus 339 C~~gG~----ll~Cd~Cp~afHl~Cl~Ppl~~-iP~---g~W~C~~C~~~k 381 (422)
|++.|+ +|.|..|-+.||..|+..+... +|. -.+.|..|...+
T Consensus 10 CG~~~~~~~~mLqC~~C~qWFH~~Cl~~~~~~~lp~~~fY~F~C~~C~~~g 60 (177)
T 3rsn_A 10 EENGRQLGEVELQCGICTKWFTADTFGIDTSSCLPFMTNYSFHCNVCHHSG 60 (177)
T ss_dssp -CTTCCTTSCEEECTTTCCEEEGGGGTCCCTTCCTTCCSEEEECTTTSTTS
T ss_pred cCCCCCCCceeEeeccccceecHHHhcccccCccccceeEEEEccccCCCC
Confidence 777665 8999999999999999754322 332 247799997643
No 63
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=83.00 E-value=0.46 Score=33.59 Aligned_cols=45 Identities=36% Similarity=0.603 Sum_probs=31.5
Q ss_pred ccccccccccC---C-eeEeCCCCCCccccccCCCCCCCCCCCCccccccccc
Q psy5116 332 YDDHCRVCHRV---G-ELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAH 380 (422)
Q Consensus 332 ~dd~C~vC~~g---G-~ll~Cd~Cp~afHl~Cl~Ppl~~iP~g~W~C~~C~~~ 380 (422)
.+..|.+|... + .......|...||..|+...+.. ...||.|+..
T Consensus 4 ~~~~C~IC~~~~~~~~~~~~~~~C~H~f~~~Ci~~w~~~----~~~CP~Cr~~ 52 (55)
T 1iym_A 4 DGVECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGS----HSTCPLCRLT 52 (55)
T ss_dssp CSCCCTTTCCCCCTTSCCEECSSSCCEECTTHHHHTTTT----CCSCSSSCCC
T ss_pred CCCcCccCCccccCCCceEECCCCCCcccHHHHHHHHHc----CCcCcCCCCE
Confidence 34579999763 2 24444569999999999866543 3579999754
No 64
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=75.51 E-value=0.57 Score=36.81 Aligned_cols=45 Identities=29% Similarity=0.668 Sum_probs=32.3
Q ss_pred ccccccccCC-eeEeCCCCCCccccccCCCCCCCCCCCCccccccccc
Q psy5116 334 DHCRVCHRVG-ELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAH 380 (422)
Q Consensus 334 d~C~vC~~gG-~ll~Cd~Cp~afHl~Cl~Ppl~~iP~g~W~C~~C~~~ 380 (422)
+.|.+|..-- .-+-|..|...||..|+...+.... .=.||.|...
T Consensus 16 ~~C~IC~~~i~~g~~C~~C~h~fH~~Ci~kWl~~~~--~~~CP~Cr~~ 61 (74)
T 2ct0_A 16 KICNICHSLLIQGQSCETCGIRMHLPCVAKYFQSNA--EPRCPHCNDY 61 (74)
T ss_dssp CBCSSSCCBCSSSEECSSSCCEECHHHHHHHSTTCS--SCCCTTTCSC
T ss_pred CcCcchhhHcccCCccCCCCchhhHHHHHHHHHhcC--CCCCCCCcCc
Confidence 4699997732 2356889999999999986655432 2369999754
No 65
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=73.01 E-value=0.34 Score=36.08 Aligned_cols=46 Identities=28% Similarity=0.665 Sum_probs=31.1
Q ss_pred ccccccccccc---CCeeEeCCCCCCccccccCCCCCCCCCCCCccccccccc
Q psy5116 331 QYDDHCRVCHR---VGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAH 380 (422)
Q Consensus 331 ~~dd~C~vC~~---gG~ll~Cd~Cp~afHl~Cl~Ppl~~iP~g~W~C~~C~~~ 380 (422)
..+..|.+|.. .++.+..-.|...||..|+...+.. ...||.|+..
T Consensus 12 ~~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~----~~~CP~Cr~~ 60 (69)
T 2kiz_A 12 DTEEKCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLIT----NKKCPICRVD 60 (69)
T ss_dssp TCCCSBTTTTBCCCSSSCEEECTTSCEEEHHHHHHHHHH----CSBCTTTCSB
T ss_pred CCCCCCeeCCccccCCCcEEEeCCCCHHHHHHHHHHHHc----CCCCcCcCcc
Confidence 34567999965 2333444569999999999754332 2359999765
No 66
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=72.83 E-value=0.47 Score=37.73 Aligned_cols=46 Identities=24% Similarity=0.554 Sum_probs=31.4
Q ss_pred ccccccccccc---CCeeEeCCCCCCccccccCCCCCCCCCCCCccccccccc
Q psy5116 331 QYDDHCRVCHR---VGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAH 380 (422)
Q Consensus 331 ~~dd~C~vC~~---gG~ll~Cd~Cp~afHl~Cl~Ppl~~iP~g~W~C~~C~~~ 380 (422)
..+..|.+|.. .++.+..-.|.-.||..|+...+.. .-.||.|+..
T Consensus 38 ~~~~~C~IC~~~~~~~~~~~~l~C~H~Fh~~Ci~~wl~~----~~~CP~Cr~~ 86 (91)
T 2l0b_A 38 GQEMCCPICCSEYVKGDVATELPCHHYFHKPCVSIWLQK----SGTCPVCRCM 86 (91)
T ss_dssp SSCSEETTTTEECCTTCEEEEETTTEEEEHHHHHHHHTT----TCBCTTTCCB
T ss_pred CCCCCCcccChhhcCCCcEEecCCCChHHHHHHHHHHHc----CCcCcCcCcc
Confidence 34567999975 2333333459999999999865543 2379999764
No 67
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=71.63 E-value=1.2 Score=33.83 Aligned_cols=47 Identities=28% Similarity=0.564 Sum_probs=31.6
Q ss_pred cccccccccccC---CeeEeCCCCCCccccccCCCCCCCCCCCCcccccccccc
Q psy5116 331 QYDDHCRVCHRV---GELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHK 381 (422)
Q Consensus 331 ~~dd~C~vC~~g---G~ll~Cd~Cp~afHl~Cl~Ppl~~iP~g~W~C~~C~~~k 381 (422)
..+..|.||... +..+.--.|...||..|+...+.. ...||.|+..-
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~----~~~CP~Cr~~~ 62 (78)
T 2ect_A 13 GSGLECPVCKEDYALGESVRQLPCNHLFHDSCIVPWLEQ----HDSCPVCRKSL 62 (78)
T ss_dssp SSSCCCTTTTSCCCTTSCEEECTTSCEEETTTTHHHHTT----TCSCTTTCCCC
T ss_pred CCCCCCeeCCccccCCCCEEEeCCCCeecHHHHHHHHHc----CCcCcCcCCcc
Confidence 445689999663 233322358999999999855432 24799998753
No 68
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=70.11 E-value=0.4 Score=36.41 Aligned_cols=45 Identities=33% Similarity=0.684 Sum_probs=31.3
Q ss_pred cccccccccc---CCeeEeCCCCCCccccccCCCCCCCCCCCCccccccccc
Q psy5116 332 YDDHCRVCHR---VGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAH 380 (422)
Q Consensus 332 ~dd~C~vC~~---gG~ll~Cd~Cp~afHl~Cl~Ppl~~iP~g~W~C~~C~~~ 380 (422)
.+..|.+|.. .++.+..-.|...||..|+...+.. ...||.|+..
T Consensus 22 ~~~~C~IC~~~~~~~~~~~~l~C~H~fh~~Ci~~w~~~----~~~CP~Cr~~ 69 (75)
T 1x4j_A 22 EQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKA----NRTCPICRAD 69 (75)
T ss_dssp SCCEETTTTEECCBTCEEEEETTTEEEETTHHHHHHHH----CSSCTTTCCC
T ss_pred CCCCCeECCcccCCCCeEEEECCCCHhHHHHHHHHHHc----CCcCcCcCCc
Confidence 4567999975 3444444469999999999854432 2479999764
No 69
>1e8j_A Rubredoxin; iron-sulfur-protein, zinc-substitution, thermostability; NMR {Desulfovibrio gigas} SCOP: g.41.5.1 PDB: 1rdg_A 2dsx_A 1spw_A
Probab=69.28 E-value=4.6 Score=29.58 Aligned_cols=17 Identities=47% Similarity=1.259 Sum_probs=12.7
Q ss_pred CCCCCCCCcccccccccc
Q psy5116 364 LRDVPQEDWQCNLCKAHK 381 (422)
Q Consensus 364 l~~iP~g~W~C~~C~~~k 381 (422)
...+|+ +|.||.|...+
T Consensus 30 f~~lP~-dw~CP~Cg~~K 46 (52)
T 1e8j_A 30 FEDLPD-DWACPVCGASK 46 (52)
T ss_dssp TTSSCT-TCCCSSSCCCT
T ss_pred hHHCCC-CCcCCCCCCcH
Confidence 345555 89999998765
No 70
>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1
Probab=68.53 E-value=2 Score=30.87 Aligned_cols=34 Identities=29% Similarity=0.806 Sum_probs=19.6
Q ss_pred eCCCCCCccccccCC-CCCCCCCCCCcccccccccc
Q psy5116 347 CCETCPAVFHLECVD-PPLRDVPQEDWQCNLCKAHK 381 (422)
Q Consensus 347 ~Cd~Cp~afHl~Cl~-Ppl~~iP~g~W~C~~C~~~k 381 (422)
.|..|...|...=-+ -++..+|+ +|.||.|...+
T Consensus 6 ~C~vCGyvyd~~~Gd~t~f~~lP~-dw~CP~Cg~~k 40 (46)
T 6rxn_A 6 VCNVCGYEYDPAEHDNVPFDQLPD-DWCCPVCGVSK 40 (46)
T ss_dssp EETTTCCEECGGGGTTCCGGGSCT-TCBCTTTCCBG
T ss_pred ECCCCCeEEeCCcCCCcchhhCCC-CCcCcCCCCcH
Confidence 355555555432222 23345665 79999998765
No 71
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=67.81 E-value=1.2 Score=37.88 Aligned_cols=27 Identities=26% Similarity=0.602 Sum_probs=0.0
Q ss_pred CCCCccccccCCCCCCCCCCCCccccccccc
Q psy5116 350 TCPAVFHLECVDPPLRDVPQEDWQCNLCKAH 380 (422)
Q Consensus 350 ~Cp~afHl~Cl~Ppl~~iP~g~W~C~~C~~~ 380 (422)
.|.-.||..|+...+.. .-.||.|+..
T Consensus 83 ~C~H~FH~~CI~~Wl~~----~~~CP~Cr~~ 109 (117)
T 4a0k_B 83 VCNHAFHFHCISRWLKT----RQVCPLDNRE 109 (117)
T ss_dssp -------------------------------
T ss_pred CcCceEcHHHHHHHHHc----CCcCCCCCCe
Confidence 69999999999976654 2369999765
No 72
>2kn9_A Rubredoxin; metalloprotein, ssgcid, structural genomics, seattle structural genomics center for infectious electron transport, iron; NMR {Mycobacterium tuberculosis}
Probab=67.44 E-value=3.1 Score=33.38 Aligned_cols=18 Identities=44% Similarity=1.023 Sum_probs=13.5
Q ss_pred CCCCCCCCCcccccccccc
Q psy5116 363 PLRDVPQEDWQCNLCKAHK 381 (422)
Q Consensus 363 pl~~iP~g~W~C~~C~~~k 381 (422)
++..+|+ +|.||.|...+
T Consensus 53 ~fedlPd-dW~CPvCga~K 70 (81)
T 2kn9_A 53 RWDDIPD-DWSCPDCGAAK 70 (81)
T ss_dssp CTTTSCT-TCCCTTTCCCG
T ss_pred ChhHCCC-CCcCCCCCCCH
Confidence 3456665 89999998865
No 73
>4bbq_A Lysine-specific demethylase 2A; oxidoreductase, ubiquitin, ligase, ubiquitination, demethyla ZF-CXXC DNA binding domain, CPG island, chromatin; 2.24A {Homo sapiens}
Probab=65.29 E-value=1.3 Score=36.78 Aligned_cols=36 Identities=17% Similarity=0.441 Sum_probs=26.4
Q ss_pred ccccccccCCeeEeCCCCCCccccccCCCCCCCCCCCCccccccccc
Q psy5116 334 DHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAH 380 (422)
Q Consensus 334 d~C~vC~~gG~ll~Cd~Cp~afHl~Cl~Ppl~~iP~g~W~C~~C~~~ 380 (422)
.+|.+|++.. |+.|...||+.|++++ .|.|..|...
T Consensus 8 ~~C~~C~~~~----C~~C~~c~~~~~~~~~-------~~~~~~c~~~ 43 (117)
T 4bbq_A 8 RKCKACVQGE----CGVCHYCRDMKKFGGP-------GRMKQSCVLR 43 (117)
T ss_dssp SCSHHHHSCC----CSCSHHHHHSGGGTSC-------CCSCCCCGGG
T ss_pred CcCcCcCCcC----CCCCCCCcCCcccCCC-------Cccccchhhe
Confidence 3566776653 9999999999999876 3666666543
No 74
>3k1l_B Fancl; UBC, ring, RWD, ligase; HET: MAL CIT; 3.20A {Drosophila melanogaster}
Probab=65.22 E-value=3.4 Score=41.75 Aligned_cols=48 Identities=27% Similarity=0.681 Sum_probs=31.1
Q ss_pred ccccccccc----CCee--EeCC--CCCCccccccCCCCCCCCCCC-------Cccccccccc
Q psy5116 333 DDHCRVCHR----VGEL--LCCE--TCPAVFHLECVDPPLRDVPQE-------DWQCNLCKAH 380 (422)
Q Consensus 333 dd~C~vC~~----gG~l--l~Cd--~Cp~afHl~Cl~Ppl~~iP~g-------~W~C~~C~~~ 380 (422)
...|.+|-. +|.+ ..|+ .|...||..|+...+...+.. -=.||.|+.+
T Consensus 308 ~~ECaICys~~l~~g~lPdk~C~n~~C~h~FH~~CL~kWLrs~~~sRqSFnvi~G~CPyCr~p 370 (381)
T 3k1l_B 308 ELRCNICFAYRLDGGEVPLVSCDNAKCVLKCHAVCLEEWFKTLMDGKTFLEVSFGQCPFCKAK 370 (381)
T ss_dssp CCSCSSSCCSSCTTCCCCCBCCSCTTCCCCBCSGGGHHHHHHHHSSSCTTTCCEEECTTTCCE
T ss_pred CccCcccceeecCCCCCccccccCCccCCccchHHHHHHHHhCCCccccccccCCCCCCCCCc
Confidence 346999954 2443 4688 799999999998543322211 0149999764
No 75
>1vyx_A ORF K3, K3RING; zinc-binding protein, ring domain, cross-brace motif; NMR {Human herpesvirus 8} SCOP: g.44.1.3
Probab=65.03 E-value=0.32 Score=36.43 Aligned_cols=47 Identities=19% Similarity=0.352 Sum_probs=30.2
Q ss_pred ccccccccccCC--ee-Ee--CCCCCCccccccCCCCCCCCCCCCccccccccc
Q psy5116 332 YDDHCRVCHRVG--EL-LC--CETCPAVFHLECVDPPLRDVPQEDWQCNLCKAH 380 (422)
Q Consensus 332 ~dd~C~vC~~gG--~l-l~--Cd~Cp~afHl~Cl~Ppl~~iP~g~W~C~~C~~~ 380 (422)
..+.|.||...+ .+ .- |.+.-+.||..||...+.. .+.+.|+.|...
T Consensus 5 ~~~~CrIC~~~~~~~l~~PC~C~gs~~~~H~~Cl~~W~~~--~~~~~C~~C~~~ 56 (60)
T 1vyx_A 5 DVPVCWICNEELGNERFRACGCTGELENVHRSCLSTWLTI--SRNTACQICGVV 56 (60)
T ss_dssp SCCEETTTTEECSCCCCCSCCCSSGGGSCCHHHHHHHHHH--HTCSBCTTTCCB
T ss_pred CCCEeEEeecCCCCceecCcCCCCchhhhHHHHHHHHHHh--CCCCccCCCCCe
Confidence 345799997632 22 23 3333459999999866532 235889999764
No 76
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=63.59 E-value=0.64 Score=32.76 Aligned_cols=44 Identities=20% Similarity=0.593 Sum_probs=30.2
Q ss_pred cccccccccC----CeeEeCCCCCCccccccCCCCCCCCCCCCccccccccc
Q psy5116 333 DDHCRVCHRV----GELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAH 380 (422)
Q Consensus 333 dd~C~vC~~g----G~ll~Cd~Cp~afHl~Cl~Ppl~~iP~g~W~C~~C~~~ 380 (422)
+..|.+|... ++.+..-.|.-.||..|+...+... ..||.|+..
T Consensus 5 ~~~C~IC~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~----~~CP~Cr~~ 52 (55)
T 2ecm_A 5 SSGCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKEG----YRCPLCSGP 52 (55)
T ss_dssp CCSCTTTCCCCCTTTSCEEECTTSCEEETTHHHHHHHHT----CCCTTSCCS
T ss_pred CCcCcccChhhcCCCcCeEecCCCCcccHHHHHHHHHcC----CcCCCCCCc
Confidence 4579999763 2345566799999999997433221 469999754
No 77
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=62.83 E-value=0.81 Score=37.38 Aligned_cols=34 Identities=26% Similarity=0.481 Sum_probs=23.1
Q ss_pred CCCCCCccccccCCCCCCCCC-CCCcccccccccc
Q psy5116 348 CETCPAVFHLECVDPPLRDVP-QEDWQCNLCKAHK 381 (422)
Q Consensus 348 Cd~Cp~afHl~Cl~Ppl~~iP-~g~W~C~~C~~~k 381 (422)
.-.|.-.||..|+...+..-. ...-.||.|+..-
T Consensus 58 ~~~C~H~Fh~~Ci~~wl~~~~~~~~~~CP~CR~~~ 92 (114)
T 1v87_A 58 LTKCSHAFHLLCLLAMYCNGNKDGSLQCPSCKTIY 92 (114)
T ss_dssp ESSSCCEECHHHHHHHHHHTCCSSCCBCTTTCCBS
T ss_pred cCCCCCcccHHHHHHHHHcccCCCCCcCCCCCCcc
Confidence 456899999999986542111 2345799998653
No 78
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=62.67 E-value=1.2 Score=34.68 Aligned_cols=28 Identities=25% Similarity=0.597 Sum_probs=21.8
Q ss_pred CCCCCccccccCCCCCCCCCCCCccccccccc
Q psy5116 349 ETCPAVFHLECVDPPLRDVPQEDWQCNLCKAH 380 (422)
Q Consensus 349 d~Cp~afHl~Cl~Ppl~~iP~g~W~C~~C~~~ 380 (422)
-.|.-.||..|+...+... -.||.|+..
T Consensus 46 ~~C~H~FH~~Ci~~Wl~~~----~~CP~CR~~ 73 (81)
T 2ecl_A 46 GECNHSFHNCCMSLWVKQN----NRCPLCQQD 73 (81)
T ss_dssp ETTSCEEEHHHHHHHTTTC----CBCTTTCCB
T ss_pred CCCCCccChHHHHHHHHhC----CCCCCcCCC
Confidence 3699999999998766543 279999765
No 79
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=61.99 E-value=2.7 Score=33.11 Aligned_cols=48 Identities=27% Similarity=0.632 Sum_probs=30.9
Q ss_pred ccccccccccC----CeeEe---CCCCCCccccccCCCCCCCCCCCCcccccccccc
Q psy5116 332 YDDHCRVCHRV----GELLC---CETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHK 381 (422)
Q Consensus 332 ~dd~C~vC~~g----G~ll~---Cd~Cp~afHl~Cl~Ppl~~iP~g~W~C~~C~~~k 381 (422)
.++.|.||... +.++. |.+.-..||..|+...+... +...||.|+..-
T Consensus 14 ~~~~C~IC~~~~~~~~~l~~pC~C~Gs~h~fH~~Cl~~Wl~~~--~~~~CplCr~~~ 68 (80)
T 2d8s_A 14 SQDICRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSS--DTRCCELCKYEF 68 (80)
T ss_dssp TSCCCSSSCCCCCSSSCEECSSSCCSSSCCEETTHHHHHHHHH--CCSBCSSSCCBC
T ss_pred CCCCCeEcCccccCCCeeEeccccCCcCCeeCHHHHHHHHhhC--CCCCCCCCCCee
Confidence 34679999763 23331 22334999999998654321 235899998764
No 80
>1dx8_A Rubredoxin; electron transport, zinc-substitution; NMR {Guillardia theta} SCOP: g.41.5.1 PDB: 1h7v_A
Probab=60.32 E-value=3.9 Score=31.82 Aligned_cols=16 Identities=25% Similarity=0.744 Sum_probs=12.3
Q ss_pred CCCCCCCcccccccccc
Q psy5116 365 RDVPQEDWQCNLCKAHK 381 (422)
Q Consensus 365 ~~iP~g~W~C~~C~~~k 381 (422)
..+|+ +|.||.|...+
T Consensus 35 ~~lPd-dw~CP~Cga~K 50 (70)
T 1dx8_A 35 VDLSD-SFMCPACRSPK 50 (70)
T ss_dssp GGSCT-TCBCTTTCCBG
T ss_pred hhCCC-CCcCCCCCCCH
Confidence 45554 79999998865
No 81
>1yk4_A Rubredoxin, RD; electron transport; 0.69A {Pyrococcus abyssi} PDB: 2pya_A 1yk5_A 1bq8_A 1bq9_A* 3kyu_A 3kyv_A 3kyw_A 3kyx_A 3kyy_A 3ryg_A 3rz6_A 3rzt_A 3ss2_A 1brf_A 1caa_A 1cad_A 1vcx_A 1zrp_A 1iu5_A 1iu6_A ...
Probab=60.01 E-value=3.7 Score=30.10 Aligned_cols=16 Identities=56% Similarity=1.296 Sum_probs=12.2
Q ss_pred CCCCCCCcccccccccc
Q psy5116 365 RDVPQEDWQCNLCKAHK 381 (422)
Q Consensus 365 ~~iP~g~W~C~~C~~~k 381 (422)
..+|+ +|.||.|...+
T Consensus 30 ~~lP~-dw~CP~Cg~~K 45 (52)
T 1yk4_A 30 EDLPD-DWVCPLCGAPK 45 (52)
T ss_dssp GGSCT-TCBCTTTCCBG
T ss_pred hHCCC-CCcCCCCCCCH
Confidence 45554 89999998765
No 82
>1s24_A Rubredoxin 2; electron transport; NMR {Pseudomonas oleovorans} SCOP: g.41.5.1
Probab=59.47 E-value=3.3 Score=33.65 Aligned_cols=17 Identities=47% Similarity=1.126 Sum_probs=12.8
Q ss_pred CCCCCCCCcccccccccc
Q psy5116 364 LRDVPQEDWQCNLCKAHK 381 (422)
Q Consensus 364 l~~iP~g~W~C~~C~~~k 381 (422)
+..+|+ +|.||.|...+
T Consensus 62 fedlPd-dW~CPvCga~K 78 (87)
T 1s24_A 62 FEDIPD-DWCCPDCGATK 78 (87)
T ss_dssp GGGCCT-TCCCSSSCCCG
T ss_pred hhHCCC-CCCCCCCCCCH
Confidence 446665 79999998765
No 83
>2lq6_A Bromodomain-containing protein 1; PHD finger, metal binding protein; NMR {Homo sapiens}
Probab=59.09 E-value=3.1 Score=33.45 Aligned_cols=30 Identities=30% Similarity=0.910 Sum_probs=23.4
Q ss_pred cccccccccc--CCeeEeCCC--CCCccccccCC
Q psy5116 332 YDDHCRVCHR--VGELLCCET--CPAVFHLECVD 361 (422)
Q Consensus 332 ~dd~C~vC~~--gG~ll~Cd~--Cp~afHl~Cl~ 361 (422)
+...|.+|++ .|-.|.|.. |..+||..|.-
T Consensus 16 ~~l~C~iC~~~~~GAciqC~~~~C~~~fHv~CA~ 49 (87)
T 2lq6_A 16 WKLTCYLCKQKGVGASIQCHKANCYTAFHVTCAQ 49 (87)
T ss_dssp CCCCBTTTTBCCSSCEEECSCTTTCCEEEHHHHH
T ss_pred hcCCCcCCCCCCCcEeEecCCCCCCCcCcHHHHH
Confidence 4567999975 366777775 99999999953
No 84
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=58.30 E-value=2.2 Score=40.36 Aligned_cols=46 Identities=28% Similarity=0.651 Sum_probs=32.5
Q ss_pred cccccccccC-CeeEeCCCCCCccccccCCCCCCCCCCCCccccccccc
Q psy5116 333 DDHCRVCHRV-GELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAH 380 (422)
Q Consensus 333 dd~C~vC~~g-G~ll~Cd~Cp~afHl~Cl~Ppl~~iP~g~W~C~~C~~~ 380 (422)
-..|.+|+.- ..-+-|..|+..||..|+.--+.. .+.-.||.|...
T Consensus 180 i~~C~iC~~iv~~g~~C~~C~~~~H~~C~~~~~~~--~~~~~CP~C~~~ 226 (238)
T 3nw0_A 180 VKICNICHSLLIQGQSCETCGIRMHLPCVAKYFQS--NAEPRCPHCNDY 226 (238)
T ss_dssp CCBCTTTCSBCSSCEECSSSCCEECHHHHHHHTTT--CSSCBCTTTCCB
T ss_pred CCcCcchhhHHhCCcccCccChHHHHHHHHHHHHh--CCCCCCCCCCCC
Confidence 3479999872 234779999999999999743332 224579999664
No 85
>2v3b_B Rubredoxin 2, rubredoxin; alkane degradation, iron-sulfur protein, oxidoreductase, ELE transfer, electron transport, FAD, NAD, iron; HET: FAD; 2.45A {Pseudomonas aeruginosa}
Probab=56.85 E-value=4.6 Score=29.95 Aligned_cols=16 Identities=44% Similarity=1.080 Sum_probs=12.2
Q ss_pred CCCCCCCcccccccccc
Q psy5116 365 RDVPQEDWQCNLCKAHK 381 (422)
Q Consensus 365 ~~iP~g~W~C~~C~~~k 381 (422)
..+|+ +|.||.|...+
T Consensus 31 ~~lP~-dw~CP~Cga~K 46 (55)
T 2v3b_B 31 EDIPA-DWVCPDCGVGK 46 (55)
T ss_dssp GGSCT-TCCCTTTCCCG
T ss_pred hHCCC-CCcCCCCCCCH
Confidence 45554 89999998765
No 86
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=56.71 E-value=1.1 Score=37.24 Aligned_cols=28 Identities=25% Similarity=0.571 Sum_probs=21.8
Q ss_pred CCCCCccccccCCCCCCCCCCCCccccccccc
Q psy5116 349 ETCPAVFHLECVDPPLRDVPQEDWQCNLCKAH 380 (422)
Q Consensus 349 d~Cp~afHl~Cl~Ppl~~iP~g~W~C~~C~~~ 380 (422)
-.|.-.||..|+...+.. .-.||.|+..
T Consensus 71 ~~C~H~FH~~Ci~~Wl~~----~~~CP~Cr~~ 98 (106)
T 3dpl_R 71 GVCNHAFHFHCISRWLKT----RQVCPLDNRE 98 (106)
T ss_dssp ETTSCEEEHHHHHHHHTT----CSBCSSSCSB
T ss_pred cccCcEECHHHHHHHHHc----CCcCcCCCCc
Confidence 469999999999876543 3469999775
No 87
>4rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.20A {Clostridium pasteurianum} SCOP: g.41.5.1 PDB: 5rxn_A 1bfy_A 1fhh_A 1fhm_A 1irn_A 1iro_A 1r0f_A 1r0g_A 1r0h_A 1r0i_A 1r0j_A 1t9q_A 1c09_A 1b2j_A 1b13_A 1smm_A 1smu_A 1smw_A 1be7_A 1t9o_A ...
Probab=56.36 E-value=4 Score=30.25 Aligned_cols=16 Identities=50% Similarity=1.317 Sum_probs=12.1
Q ss_pred CCCCCCCcccccccccc
Q psy5116 365 RDVPQEDWQCNLCKAHK 381 (422)
Q Consensus 365 ~~iP~g~W~C~~C~~~k 381 (422)
..+|+ +|.||.|...|
T Consensus 31 e~lP~-dw~CP~Cg~~K 46 (54)
T 4rxn_A 31 KDIPD-DWVCPLCGVGK 46 (54)
T ss_dssp GGSCT-TCBCTTTCCBG
T ss_pred hHCCC-CCcCcCCCCcH
Confidence 45554 79999998765
No 88
>2k1p_A Zinc finger RAN-binding domain-containing protein 2; ZNF265, RNA binding, ranbp2, RBZ, ZIS, alternative splicing, metal-binding, mRNA processing; NMR {Homo sapiens} PDB: 3g9y_A
Probab=55.49 E-value=7.1 Score=25.83 Aligned_cols=23 Identities=26% Similarity=0.660 Sum_probs=17.7
Q ss_pred CCCcccccccccccCCcccCCch
Q psy5116 369 QEDWQCNLCKAHKVTGVTDCLPD 391 (422)
Q Consensus 369 ~g~W~C~~C~~~k~~g~~dc~~~ 391 (422)
.|||.|+.|..........|...
T Consensus 4 ~gDW~C~~C~~~Nfa~R~~C~~C 26 (33)
T 2k1p_A 4 ANDWQCKTCSNVNWARRSECNMC 26 (33)
T ss_dssp SSSCBCSSSCCBCCTTCSBCSSS
T ss_pred CCCcccCCCCCcccccccccccc
Confidence 57999999988876666666554
No 89
>2lk0_A RNA-binding protein 5; zinc finger; NMR {Homo sapiens} PDB: 2lk1_A*
Probab=53.89 E-value=3.6 Score=27.11 Aligned_cols=23 Identities=30% Similarity=0.673 Sum_probs=17.2
Q ss_pred CCCcccccccccccCCcccCCch
Q psy5116 369 QEDWQCNLCKAHKVTGVTDCLPD 391 (422)
Q Consensus 369 ~g~W~C~~C~~~k~~g~~dc~~~ 391 (422)
.|+|.|+.|..........|...
T Consensus 3 ~gDW~C~~C~~~Nfa~r~~C~~C 25 (32)
T 2lk0_A 3 FEDWLCNKCCLNNFRKRLKCFRC 25 (32)
T ss_dssp CSEEECTTTCCEEETTCCBCTTT
T ss_pred CCCCCcCcCcCCcChhcceecCC
Confidence 37999999988776666666554
No 90
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=53.78 E-value=0.93 Score=34.07 Aligned_cols=46 Identities=26% Similarity=0.491 Sum_probs=30.0
Q ss_pred cccccccccccC---CeeEeCCCCCCccccccCCCCCCCCCCCCccccccccc
Q psy5116 331 QYDDHCRVCHRV---GELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAH 380 (422)
Q Consensus 331 ~~dd~C~vC~~g---G~ll~Cd~Cp~afHl~Cl~Ppl~~iP~g~W~C~~C~~~ 380 (422)
..+..|.+|... +..+.--.|...||..|+...+.. .-.||.|+..
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~C~H~f~~~Ci~~~~~~----~~~CP~Cr~~ 61 (74)
T 2ep4_A 13 NLHELCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEV----RKVCPLCNMP 61 (74)
T ss_dssp CCSCBCSSSCCBCCSSSCEEEETTTEEEEHHHHHHHHHH----CSBCTTTCCB
T ss_pred CCCCCCcCCCcccCCCCcEEEcCCCCEecHHHHHHHHHc----CCcCCCcCcc
Confidence 345689999773 222222258999999999754332 1279999765
No 91
>1weq_A PHD finger protein 7; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=52.02 E-value=9 Score=30.97 Aligned_cols=33 Identities=36% Similarity=0.887 Sum_probs=26.3
Q ss_pred eeEeCCCCC-CccccccCCCCCCCCCCCCcccccccc
Q psy5116 344 ELLCCETCP-AVFHLECVDPPLRDVPQEDWQCNLCKA 379 (422)
Q Consensus 344 ~ll~Cd~Cp-~afHl~Cl~Ppl~~iP~g~W~C~~C~~ 379 (422)
+||.|..|. ..-|..|.. +.. ....|.|..|..
T Consensus 45 ~L~lC~~Cgs~gtH~~Cs~--l~~-~~~~weC~~C~~ 78 (85)
T 1weq_A 45 RLILCATCGSHGTHRDCSS--LRP-NSKKWECNECLP 78 (85)
T ss_dssp BCEECSSSCCCEECSGGGT--CCT-TCSCCCCTTTSC
T ss_pred EEEeCcccCCchhHHHHhC--CcC-CCCCEECCcCcc
Confidence 589999999 678999988 332 345899999974
No 92
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=51.40 E-value=3.1 Score=31.01 Aligned_cols=44 Identities=23% Similarity=0.509 Sum_probs=30.3
Q ss_pred ccccccccccCC-eeEeCCCCCCccccccCCCCCCCCCCCCccccccccc
Q psy5116 332 YDDHCRVCHRVG-ELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAH 380 (422)
Q Consensus 332 ~dd~C~vC~~gG-~ll~Cd~Cp~afHl~Cl~Ppl~~iP~g~W~C~~C~~~ 380 (422)
.+..|.+|...- +.+.. .|.-.||..|+...+.. ...||.|+..
T Consensus 14 ~~~~C~IC~~~~~~~~~~-~CgH~fC~~Ci~~~~~~----~~~CP~Cr~~ 58 (71)
T 2d8t_A 14 TVPECAICLQTCVHPVSL-PCKHVFCYLCVKGASWL----GKRCALCRQE 58 (71)
T ss_dssp SCCBCSSSSSBCSSEEEE-TTTEEEEHHHHHHCTTC----SSBCSSSCCB
T ss_pred CCCCCccCCcccCCCEEc-cCCCHHHHHHHHHHHHC----CCcCcCcCch
Confidence 456799997742 22222 59999999999754432 2579999765
No 93
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=50.33 E-value=3.7 Score=30.70 Aligned_cols=47 Identities=15% Similarity=0.317 Sum_probs=32.2
Q ss_pred ccccccccccccCC-eeEeCCCCCCccccccCCCCCCCCCCCCccccccccc
Q psy5116 330 FQYDDHCRVCHRVG-ELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAH 380 (422)
Q Consensus 330 ~~~dd~C~vC~~gG-~ll~Cd~Cp~afHl~Cl~Ppl~~iP~g~W~C~~C~~~ 380 (422)
...+..|.+|...- +.+....|.-.||..|+...+.. .-.||.|+..
T Consensus 12 ~~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~----~~~CP~Cr~~ 59 (72)
T 2djb_A 12 LTPYILCSICKGYLIDATTITECLHTFCKSCIVRHFYY----SNRCPKCNIV 59 (72)
T ss_dssp CCGGGSCTTTSSCCSSCEECSSSCCEECHHHHHHHHHH----CSSCTTTCCC
T ss_pred cCCCCCCCCCChHHHCcCEECCCCCHHHHHHHHHHHHc----CCcCCCcCcc
Confidence 34566899998743 34445679999999998743321 2469999765
No 94
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=50.19 E-value=3.2 Score=30.24 Aligned_cols=46 Identities=24% Similarity=0.626 Sum_probs=31.3
Q ss_pred cccccccccccC-------CeeEeCCCCCCccccccCCCCCCCCCCCCccccccccc
Q psy5116 331 QYDDHCRVCHRV-------GELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAH 380 (422)
Q Consensus 331 ~~dd~C~vC~~g-------G~ll~Cd~Cp~afHl~Cl~Ppl~~iP~g~W~C~~C~~~ 380 (422)
..+..|.||... ++.+..-.|.-.||..|+...+.. .-.||.|+..
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~----~~~CP~Cr~~ 65 (69)
T 2ea6_A 13 SGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKN----ANTCPTCRKK 65 (69)
T ss_dssp TCCCCCTTTCCCHHHHTTTTCCEEECSSSCEEEHHHHHHHHHH----CSSCTTTCCC
T ss_pred CCCCCCcccCccccccccccCCeEeCCCCChhcHHHHHHHHHc----CCCCCCCCCc
Confidence 345679999763 344455689999999999743322 2369999764
No 95
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=49.62 E-value=15 Score=26.22 Aligned_cols=42 Identities=19% Similarity=0.425 Sum_probs=27.6
Q ss_pred cccccccccCCeeEeCCCCCCccccccCCCCCCCCCCCCcccccccccc
Q psy5116 333 DDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHK 381 (422)
Q Consensus 333 dd~C~vC~~gG~ll~Cd~Cp~afHl~Cl~Ppl~~iP~g~W~C~~C~~~k 381 (422)
+..|.+|...-....--.|.-.|+..|+.. ....||.|+..-
T Consensus 6 ~~~C~IC~~~~~~p~~l~CgH~fC~~Ci~~-------~~~~CP~Cr~~~ 47 (56)
T 1bor_A 6 FLRCQQCQAEAKCPKLLPCLHTLCSGCLEA-------SGMQCPICQAPW 47 (56)
T ss_dssp CSSCSSSCSSCBCCSCSTTSCCSBTTTCSS-------SSSSCSSCCSSS
T ss_pred CCCceEeCCccCCeEEcCCCCcccHHHHcc-------CCCCCCcCCcEe
Confidence 346999977432212235888899999864 245799997653
No 96
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=49.42 E-value=1.7 Score=37.92 Aligned_cols=47 Identities=19% Similarity=0.566 Sum_probs=33.8
Q ss_pred cccccccccccC-CeeEeCCCCCCccccccCCCCCCCCCCCCccccccccc
Q psy5116 331 QYDDHCRVCHRV-GELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAH 380 (422)
Q Consensus 331 ~~dd~C~vC~~g-G~ll~Cd~Cp~afHl~Cl~Ppl~~iP~g~W~C~~C~~~ 380 (422)
..+..|.+|... .+-+.+..|.-.||..|+...+. .+...||.|+..
T Consensus 52 ~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~---~~~~~CP~Cr~~ 99 (165)
T 2ckl_B 52 HSELMCPICLDMLKNTMTTKECLHRFCADCIITALR---SGNKECPTCRKK 99 (165)
T ss_dssp HHHHBCTTTSSBCSSEEEETTTCCEEEHHHHHHHHH---TTCCBCTTTCCB
T ss_pred CCCCCCcccChHhhCcCEeCCCCChhHHHHHHHHHH---hCcCCCCCCCCc
Confidence 345689999774 34455568999999999975443 234679999865
No 97
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=48.09 E-value=5.9 Score=32.28 Aligned_cols=45 Identities=16% Similarity=0.522 Sum_probs=31.6
Q ss_pred ccccccccccCC-eeEeCCCCCCccccccCCCCCCCCCCCCccccccccc
Q psy5116 332 YDDHCRVCHRVG-ELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAH 380 (422)
Q Consensus 332 ~dd~C~vC~~gG-~ll~Cd~Cp~afHl~Cl~Ppl~~iP~g~W~C~~C~~~ 380 (422)
.+..|.+|...- +-+. -.|.-.||..|+...+. .+...||.|+..
T Consensus 14 ~~~~C~iC~~~~~~p~~-~~CgH~fC~~Ci~~~~~---~~~~~CP~Cr~~ 59 (115)
T 3l11_A 14 SECQCGICMEILVEPVT-LPCNHTLCKPCFQSTVE---KASLCCPFCRRR 59 (115)
T ss_dssp HHHBCTTTCSBCSSCEE-CTTSCEECHHHHCCCCC---TTTSBCTTTCCB
T ss_pred CCCCCccCCcccCceeE-cCCCCHHhHHHHHHHHh---HCcCCCCCCCcc
Confidence 456799998742 2221 17999999999986543 345789999875
No 98
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=47.93 E-value=3.4 Score=30.38 Aligned_cols=45 Identities=24% Similarity=0.641 Sum_probs=31.5
Q ss_pred ccccccccccC-------CeeEeCCCCCCccccccCCCCCCCCCCCCccccccccc
Q psy5116 332 YDDHCRVCHRV-------GELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAH 380 (422)
Q Consensus 332 ~dd~C~vC~~g-------G~ll~Cd~Cp~afHl~Cl~Ppl~~iP~g~W~C~~C~~~ 380 (422)
.+..|.+|... ++.+..-.|.-.||..|+...+... -.||.|+..
T Consensus 9 ~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~----~~CP~Cr~~ 60 (71)
T 3ng2_A 9 GTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNA----NTCPTCRKK 60 (71)
T ss_dssp TCCBCTTTCCBHHHHHTTTCCEEECTTSCEEEHHHHHHHHHHC----SBCTTTCCB
T ss_pred CCCCCcccChhhhccccccCCeEeCCCCChHhHHHHHHHHHcC----CCCCCCCCc
Confidence 34579999762 4455667899999999997433221 279999765
No 99
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=47.63 E-value=2.1 Score=31.64 Aligned_cols=44 Identities=18% Similarity=0.499 Sum_probs=30.9
Q ss_pred ccccccccccCCeeEeCCCCCCccccccCCCCCCCCCCCCccccccccc
Q psy5116 332 YDDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAH 380 (422)
Q Consensus 332 ~dd~C~vC~~gG~ll~Cd~Cp~afHl~Cl~Ppl~~iP~g~W~C~~C~~~ 380 (422)
.+..|.+|...-.. .--.|.-.||..|+...+. ....||.|+..
T Consensus 14 ~~~~C~IC~~~~~~-~~~~CgH~fc~~Ci~~~~~----~~~~CP~Cr~~ 57 (70)
T 2ecn_A 14 DEEECCICMDGRAD-LILPCAHSFCQKCIDKWSD----RHRNCPICRLQ 57 (70)
T ss_dssp CCCCCSSSCCSCCS-EEETTTEEECHHHHHHSSC----CCSSCHHHHHC
T ss_pred CCCCCeeCCcCccC-cccCCCCcccHHHHHHHHH----CcCcCCCcCCc
Confidence 45679999774322 2346889999999986544 35679999765
No 100
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=47.59 E-value=8.8 Score=28.67 Aligned_cols=50 Identities=18% Similarity=0.394 Sum_probs=32.8
Q ss_pred cccccccccccCC-eeEeCCCCCCccccccCCCCCCCCC---CCCcccccccccc
Q psy5116 331 QYDDHCRVCHRVG-ELLCCETCPAVFHLECVDPPLRDVP---QEDWQCNLCKAHK 381 (422)
Q Consensus 331 ~~dd~C~vC~~gG-~ll~Cd~Cp~afHl~Cl~Ppl~~iP---~g~W~C~~C~~~k 381 (422)
..+..|.+|...- +-+. -.|.-.||..|+...+.... .+.-.||.|+..-
T Consensus 10 ~~~~~C~IC~~~~~~p~~-l~CgH~fC~~Ci~~~~~~~~~~~~~~~~CP~Cr~~~ 63 (79)
T 2egp_A 10 QEEVTCPICLELLTEPLS-LDCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISY 63 (79)
T ss_dssp CCCCEETTTTEECSSCCC-CSSSCCCCHHHHSCCCCCCSSSCCCCCCCSSSCCCC
T ss_pred ccCCCCcCCCcccCCeeE-CCCCCHHHHHHHHHHHHhcccCCCCCCcCCCCCCcC
Confidence 3456799997732 2111 26999999999986654321 2356899998763
No 101
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=47.26 E-value=4.2 Score=30.11 Aligned_cols=48 Identities=23% Similarity=0.497 Sum_probs=32.5
Q ss_pred cccccccccccCC-eeEeCCCCCCccccccCCCCCCCCCCCCccccccccc
Q psy5116 331 QYDDHCRVCHRVG-ELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAH 380 (422)
Q Consensus 331 ~~dd~C~vC~~gG-~ll~Cd~Cp~afHl~Cl~Ppl~~iP~g~W~C~~C~~~ 380 (422)
..+..|.+|...- +.+.. .|.-.||..|+...+.. ..+.-.||.|+..
T Consensus 18 ~~~~~C~IC~~~~~~~~~~-~CgH~fC~~Ci~~~~~~-~~~~~~CP~Cr~~ 66 (73)
T 2ysl_A 18 QEEVICPICLDILQKPVTI-DCGHNFCLKCITQIGET-SCGFFKCPLCKTS 66 (73)
T ss_dssp CCCCBCTTTCSBCSSEEEC-TTCCEEEHHHHHHHCSS-SCSCCCCSSSCCC
T ss_pred ccCCEeccCCcccCCeEEc-CCCChhhHHHHHHHHHc-CCCCCCCCCCCCc
Confidence 4456899998742 22222 89999999999855431 1235679999765
No 102
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=46.33 E-value=1.9 Score=34.74 Aligned_cols=47 Identities=21% Similarity=0.469 Sum_probs=34.4
Q ss_pred ccccccccccC-CeeEeCCCCCCccccccCCCCCCCCCCCCcccccccccc
Q psy5116 332 YDDHCRVCHRV-GELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHK 381 (422)
Q Consensus 332 ~dd~C~vC~~g-G~ll~Cd~Cp~afHl~Cl~Ppl~~iP~g~W~C~~C~~~k 381 (422)
.+..|.+|... .+-+.|-.|.-.||..|+...+... ...||.|+..-
T Consensus 21 ~~~~C~IC~~~~~~p~~~~~CgH~FC~~Ci~~~~~~~---~~~CP~Cr~~~ 68 (100)
T 3lrq_A 21 EVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQ---RAQCPHCRAPL 68 (100)
T ss_dssp HHTBCTTTCSBCSSEEECTTTCCEEEHHHHHHHHHHT---CSBCTTTCCBC
T ss_pred CCCCCccCCccccCccccCCCCChhhHHHHHHHHHHC---cCCCCCCCCcC
Confidence 44579999874 4567778999999999997544322 15799998763
No 103
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=44.95 E-value=2.6 Score=30.96 Aligned_cols=47 Identities=21% Similarity=0.389 Sum_probs=30.6
Q ss_pred cccccccccccCCeeEeCCCCCCccccccCCCCCCCCCCCCccccccccc
Q psy5116 331 QYDDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAH 380 (422)
Q Consensus 331 ~~dd~C~vC~~gG~ll~Cd~Cp~afHl~Cl~Ppl~~iP~g~W~C~~C~~~ 380 (422)
..+..|.+|...-.-..--.|.-.||..|+...+. .+...||.|+..
T Consensus 13 ~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~---~~~~~CP~Cr~~ 59 (66)
T 2ecy_A 13 EDKYKCEKCHLVLCSPKQTECGHRFCESCMAALLS---SSSPKCTACQES 59 (66)
T ss_dssp CCCEECTTTCCEESSCCCCSSSCCCCHHHHHHHHT---TSSCCCTTTCCC
T ss_pred CcCCCCCCCChHhcCeeECCCCCHHHHHHHHHHHH---hCcCCCCCCCcC
Confidence 34567999977321111137999999999885443 234579999765
No 104
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1
Probab=42.05 E-value=2.4 Score=31.12 Aligned_cols=45 Identities=22% Similarity=0.527 Sum_probs=30.5
Q ss_pred cccccccccCC-eeEeCCCCCCccccccCCCCCCCCCCCCcccccccccc
Q psy5116 333 DDHCRVCHRVG-ELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHK 381 (422)
Q Consensus 333 dd~C~vC~~gG-~ll~Cd~Cp~afHl~Cl~Ppl~~iP~g~W~C~~C~~~k 381 (422)
+..|.+|...- +....-.|.-.||..|+...+.. ...||.|+..-
T Consensus 5 ~~~C~IC~~~~~~~~~~~~C~H~fc~~Ci~~~~~~----~~~CP~Cr~~~ 50 (68)
T 1chc_A 5 AERCPICLEDPSNYSMALPCLHAFCYVCITRWIRQ----NPTCPLCKVPV 50 (68)
T ss_dssp CCCCSSCCSCCCSCEEETTTTEEESTTHHHHHHHH----SCSTTTTCCCC
T ss_pred CCCCeeCCccccCCcEecCCCCeeHHHHHHHHHhC----cCcCcCCChhh
Confidence 45799998753 22344569999999998743321 24799997653
No 105
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=41.70 E-value=3.1 Score=35.40 Aligned_cols=43 Identities=19% Similarity=0.576 Sum_probs=29.0
Q ss_pred cccccccccCC-eeEeCCCCCCccccccCCCCCCCCCCCCccccccccc
Q psy5116 333 DDHCRVCHRVG-ELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAH 380 (422)
Q Consensus 333 dd~C~vC~~gG-~ll~Cd~Cp~afHl~Cl~Ppl~~iP~g~W~C~~C~~~ 380 (422)
+..|.+|...- +.+. -.|+-.||..|+...+.. .-.||.|+..
T Consensus 53 ~~~C~iC~~~~~~~~~-~~CgH~fc~~Ci~~~~~~----~~~CP~Cr~~ 96 (138)
T 4ayc_A 53 ELQCIICSEYFIEAVT-LNCAHSFCSYCINEWMKR----KIECPICRKD 96 (138)
T ss_dssp HSBCTTTCSBCSSEEE-ETTSCEEEHHHHHHHTTT----CSBCTTTCCB
T ss_pred cCCCcccCcccCCceE-CCCCCCccHHHHHHHHHc----CCcCCCCCCc
Confidence 34699998742 2222 258999999998754432 2469999765
No 106
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=40.02 E-value=3.7 Score=29.38 Aligned_cols=43 Identities=26% Similarity=0.699 Sum_probs=29.4
Q ss_pred ccccccccC-------CeeEeCCCCCCccccccCCCCCCCCCCCCccccccccc
Q psy5116 334 DHCRVCHRV-------GELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAH 380 (422)
Q Consensus 334 d~C~vC~~g-------G~ll~Cd~Cp~afHl~Cl~Ppl~~iP~g~W~C~~C~~~ 380 (422)
..|.+|... ++.+..-.|.-.||..|+...+.. ...||.|+..
T Consensus 4 ~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~----~~~CP~Cr~~ 53 (64)
T 2xeu_A 4 VSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKN----ANTCPTCRKK 53 (64)
T ss_dssp CBCTTTCCBHHHHHHTTCCEEEETTSCEEEHHHHHHHHHH----CSBCTTTCCB
T ss_pred CCCCccChhhhCccccCCCEEeCCCCCchhHHHHHHHHHc----CCCCCCCCcc
Confidence 468888762 334455689999999999743322 2379999765
No 107
>1n0z_A ZNF265; zinc finger, RNA splicing, transcription; NMR {Homo sapiens} SCOP: g.41.11.1
Probab=39.34 E-value=16 Score=25.93 Aligned_cols=26 Identities=27% Similarity=0.502 Sum_probs=19.4
Q ss_pred CCCCCcccc--cccccccCCcccCCchh
Q psy5116 367 VPQEDWQCN--LCKAHKVTGVTDCLPDV 392 (422)
Q Consensus 367 iP~g~W~C~--~C~~~k~~g~~dc~~~~ 392 (422)
.-.|||.|+ .|..........|.+..
T Consensus 10 ~~~GDW~C~~~~C~~~Nfa~R~~C~~C~ 37 (45)
T 1n0z_A 10 VSDGDWICPDKKCGNVNFARRTSCDRCG 37 (45)
T ss_dssp SCSSSCBCSSTTTCCBCCSSCSBCSSSC
T ss_pred CCCCCcCCCCCCCCCEEccccccccccC
Confidence 345899999 89888777767776553
No 108
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=38.90 E-value=7 Score=27.40 Aligned_cols=45 Identities=22% Similarity=0.534 Sum_probs=26.9
Q ss_pred ccccccccccCCeeEeCCCCCCccccccCCCCCCCCCCCCcccccc
Q psy5116 332 YDDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLC 377 (422)
Q Consensus 332 ~dd~C~vC~~gG~ll~Cd~Cp~afHl~Cl~Ppl~~iP~g~W~C~~C 377 (422)
.+..|.+|...-....--.|.-.||..|+...+... .....||.|
T Consensus 14 ~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~-~~~~~CP~C 58 (58)
T 2ecj_A 14 VEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDL-ERDFPCPVC 58 (58)
T ss_dssp CCCBCSSSCCBCSSCCCCSSCCCCCHHHHHHHTTSS-CCSCCCSCC
T ss_pred cCCCCccCCcccCccEeCCCCCccCHHHHHHHHHhc-CCCCCCCCC
Confidence 455799997732111112588889999987543322 234567766
No 109
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=36.19 E-value=5.7 Score=29.88 Aligned_cols=49 Identities=16% Similarity=0.541 Sum_probs=32.4
Q ss_pred ccccccccccccC-CeeEeCCCCCCccccccCCCCCCCCCCCCccccccccc
Q psy5116 330 FQYDDHCRVCHRV-GELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAH 380 (422)
Q Consensus 330 ~~~dd~C~vC~~g-G~ll~Cd~Cp~afHl~Cl~Ppl~~iP~g~W~C~~C~~~ 380 (422)
...+..|.+|... .+-+.-..|...||..|+...+... +...||.|+..
T Consensus 12 ~~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~--~~~~CP~Cr~~ 61 (74)
T 2yur_A 12 IPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTALLES--DEHTCPTCHQN 61 (74)
T ss_dssp SCGGGSCSSSCCCCTTCEECSSSCCEECTTHHHHHHHHS--SSSCCSSSCCS
T ss_pred CCCCCCCcCCChHHhCCeEcCCCCCHHHHHHHHHHHHhc--CCCcCCCCCCc
Confidence 3455689999774 2333334499999999987544321 23579999875
No 110
>2y9y_B IOC3, ISWI one complex protein 3; transcription, nuclear protein complex, chromatin remodeling nucleosome remodeling; 3.25A {Saccharomyces cerevisiae} PDB: 2y9z_B
Probab=36.00 E-value=56 Score=34.88 Aligned_cols=56 Identities=21% Similarity=0.385 Sum_probs=45.8
Q ss_pred HhHHHHHHHHHHHHhcccc--cccCCcCHHHHHHHHccCCCc---------------------------------chHHH
Q psy5116 183 EYVMQTLSIYEVLRHFKSL--IRLSPFRFEDFCAVLNFEEQS---------------------------------NLLVE 227 (422)
Q Consensus 183 e~vg~~L~v~efL~~F~~~--L~LsPFtledf~~AL~~~~~~---------------------------------~LL~E 227 (422)
-.-++.+-|-.|++.|..+ -.|..|.+.||+..|..-... ..+.-
T Consensus 52 PYA~DIifImsFinKF~~vf~~~l~nlgpQDfE~GL~L~p~~~~~~~~~~~~g~~~~~~~lY~d~~~~k~~~~~qD~Mnl 131 (624)
T 2y9y_B 52 PYAGDIIKLMAFINKFSSFFHSDLQNLSFQDFEVGLDLYPGDPNGSAAGIVKGPEDTSLLLYPDFMAIKDIVYCQDKMNL 131 (624)
T ss_dssp TTHHHHHHHHHHHHHTTTTSCTTTTTCCHHHHHHHHTCCSSCSSSSCSSEECSSSCCCEECHHHHSCSHHHHHHHHHHHH
T ss_pred CCCcchHHHHHHHHHHHhhccCcccCcChHhhhccccCCCCccccccccccccccccchhhhcccccccccccchHHHHH
Confidence 4568999999999999999 578899999999999755321 25666
Q ss_pred HHHHHHHhhhc
Q psy5116 228 IHVSLLKTIFR 238 (422)
Q Consensus 228 iHiaLLk~ll~ 238 (422)
++++||+++|+
T Consensus 132 Lf~~LL~LvLN 142 (624)
T 2y9y_B 132 LFLSLLDLTFT 142 (624)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHHcC
Confidence 88999999887
No 111
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=34.82 E-value=3.6 Score=31.45 Aligned_cols=45 Identities=18% Similarity=0.441 Sum_probs=30.6
Q ss_pred ccccccccccCC-eeEeCCCCCCccccccCCCCCCCCCCCCcccccccccc
Q psy5116 332 YDDHCRVCHRVG-ELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHK 381 (422)
Q Consensus 332 ~dd~C~vC~~gG-~ll~Cd~Cp~afHl~Cl~Ppl~~iP~g~W~C~~C~~~k 381 (422)
....|.+|...- +.+. -.|.-.||..|+...+.. ...||.|+..-
T Consensus 14 ~~~~C~IC~~~~~~p~~-~~CgH~fC~~Ci~~~~~~----~~~CP~Cr~~~ 59 (81)
T 2csy_A 14 IPFRCFICRQAFQNPVV-TKCRHYFCESCALEHFRA----TPRCYICDQPT 59 (81)
T ss_dssp CCSBCSSSCSBCCSEEE-CTTSCEEEHHHHHHHHHH----CSBCSSSCCBC
T ss_pred CCCCCcCCCchhcCeeE-ccCCCHhHHHHHHHHHHC----CCcCCCcCccc
Confidence 445799997742 2222 479999999998744322 34799998764
No 112
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=34.53 E-value=3.9 Score=31.32 Aligned_cols=49 Identities=14% Similarity=0.310 Sum_probs=31.9
Q ss_pred cccccccccccCCe-----eEeCCCCCCccccccCCCCCCCCCCCCcccccccccc
Q psy5116 331 QYDDHCRVCHRVGE-----LLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHK 381 (422)
Q Consensus 331 ~~dd~C~vC~~gG~-----ll~Cd~Cp~afHl~Cl~Ppl~~iP~g~W~C~~C~~~k 381 (422)
.....|.+|...-. .+. -.|.-.||..|+...+... .+...||.|+..-
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~-~~CgH~fC~~Ci~~~~~~~-~~~~~CP~Cr~~~ 66 (88)
T 2ct2_A 13 REVLECPICMESFTEEQLRPKL-LHCGHTICRQCLEKLLASS-INGVRCPFCSKIT 66 (88)
T ss_dssp CSCCBCTTTCCBCCTTSSCEEE-CSSSCEEEHHHHHHHHHHC-SSCBCCTTTCCCB
T ss_pred cCCCCCccCCccccccCCCeEE-CCCCChhhHHHHHHHHHcC-CCCcCCCCCCCcc
Confidence 34567999977321 222 2699999999987543321 1246899998753
No 113
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=33.12 E-value=5 Score=30.21 Aligned_cols=46 Identities=7% Similarity=0.094 Sum_probs=31.4
Q ss_pred cccccccccccCC-eeEeCCCCCCccccccCCCCCCCCCCCCccccccccc
Q psy5116 331 QYDDHCRVCHRVG-ELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAH 380 (422)
Q Consensus 331 ~~dd~C~vC~~gG-~ll~Cd~Cp~afHl~Cl~Ppl~~iP~g~W~C~~C~~~ 380 (422)
..+..|.+|...- +-+.. .|+..|+..|+...+. .+...||.|...
T Consensus 6 ~~~~~C~IC~~~~~~Pv~~-~CgH~fc~~Ci~~~~~---~~~~~CP~C~~~ 52 (78)
T 1t1h_A 6 PEYFRCPISLELMKDPVIV-STGQTYERSSIQKWLD---AGHKTCPKSQET 52 (78)
T ss_dssp SSSSSCTTTSCCCSSEEEE-TTTEEEEHHHHHHHHT---TTCCBCTTTCCB
T ss_pred cccCCCCCccccccCCEEc-CCCCeecHHHHHHHHH---HCcCCCCCCcCC
Confidence 3456799998742 22222 6999999999875443 235689999765
No 114
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=33.09 E-value=4.1 Score=30.73 Aligned_cols=49 Identities=16% Similarity=0.463 Sum_probs=31.6
Q ss_pred cccccccccccCC-eeEeCCCCCCccccccCCCCCCCC--CCCCccccccccc
Q psy5116 331 QYDDHCRVCHRVG-ELLCCETCPAVFHLECVDPPLRDV--PQEDWQCNLCKAH 380 (422)
Q Consensus 331 ~~dd~C~vC~~gG-~ll~Cd~Cp~afHl~Cl~Ppl~~i--P~g~W~C~~C~~~ 380 (422)
..+..|.+|...- +-+. -.|...||..|+...+... ..+...||.|+..
T Consensus 17 ~~~~~C~IC~~~~~~p~~-~~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~ 68 (85)
T 2ecw_A 17 KEEVTCPICLELLKEPVS-ADCNHSFCRACITLNYESNRNTDGKGNCPVCRVP 68 (85)
T ss_dssp CTTTSCTTTCSCCSSCEE-CTTSCCBCHHHHHHHHHHSBCTTSCBCCTTTCCC
T ss_pred ccCCCCcCCChhhCccee-CCCCCHHHHHHHHHHHHhccCCCCCCCCCCCCCc
Confidence 3456899998742 2222 2599999999987433221 1235789999765
No 115
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=32.77 E-value=4.4 Score=32.73 Aligned_cols=47 Identities=17% Similarity=0.332 Sum_probs=32.7
Q ss_pred cccccccccccC-CeeEeCCCCCCccccccCCCCCCCCCCCCcccccccccc
Q psy5116 331 QYDDHCRVCHRV-GELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHK 381 (422)
Q Consensus 331 ~~dd~C~vC~~g-G~ll~Cd~Cp~afHl~Cl~Ppl~~iP~g~W~C~~C~~~k 381 (422)
..+..|.+|... .+-+....|.-.||..|+...+.. .-.||.|+..-
T Consensus 13 ~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~----~~~CP~Cr~~~ 60 (108)
T 2ckl_A 13 NPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET----SKYCPICDVQV 60 (108)
T ss_dssp GGGTBCTTTSSBCSSEEEETTTCCEEEHHHHHHHHTS----CSBCTTTCCBS
T ss_pred CCcCCCccCChHHhCcCEeCCCCChhhHHHHHHHHHh----CCcCcCCCccc
Confidence 345679999774 334445689999999998744332 25799998763
No 116
>2zet_C Melanophilin; complex, GTP-binding protein, GTPase, G-protein, RAB, RAB27B, effector, SLP homology domain, acetylation, lipoprotein, membrane; HET: GTP; 3.00A {Mus musculus}
Probab=32.37 E-value=17 Score=32.10 Aligned_cols=47 Identities=19% Similarity=0.598 Sum_probs=35.2
Q ss_pred ccccccccccC-----CeeEeCCCCCCccccccCCCCCCCCCCCCcccccccccc
Q psy5116 332 YDDHCRVCHRV-----GELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHK 381 (422)
Q Consensus 332 ~dd~C~vC~~g-----G~ll~Cd~Cp~afHl~Cl~Ppl~~iP~g~W~C~~C~~~k 381 (422)
++..|..|+.. +.-..|..|..-.-..|-. ...++..|.|..|....
T Consensus 67 ~~~~C~~C~~~fg~l~~~g~~C~~C~~~VC~~C~~---~~~~~~~W~C~vC~k~r 118 (153)
T 2zet_C 67 NETHCARCLQPYRLLLNSRRQCLECSLFVCKSCSH---AHPEEQGWLCDPCHLAR 118 (153)
T ss_dssp GGTBCTTTCCBGGGCSSCCEECTTTCCEECGGGEE---CCSSSSSCEEHHHHHHH
T ss_pred CCccchhhcCccccccCCCCcCCCCCchhhccccc---ccCCCCcEeeHHHHHHH
Confidence 45689999884 4456899999888888874 22345689999997654
No 117
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=31.60 E-value=4.5 Score=33.54 Aligned_cols=45 Identities=18% Similarity=0.532 Sum_probs=30.5
Q ss_pred cccccccccCC-eeEeCCCCCCccccccCCCCCCCCCCCCcccccccccc
Q psy5116 333 DDHCRVCHRVG-ELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHK 381 (422)
Q Consensus 333 dd~C~vC~~gG-~ll~Cd~Cp~afHl~Cl~Ppl~~iP~g~W~C~~C~~~k 381 (422)
+..|.+|...- +-+. -.|.-.||..|+...+. .....||.|+..-
T Consensus 52 ~~~C~IC~~~~~~p~~-~~CgH~fC~~Ci~~~~~---~~~~~CP~Cr~~~ 97 (124)
T 3fl2_A 52 TFQCICCQELVFRPIT-TVCQHNVCKDCLDRSFR---AQVFSCPACRYDL 97 (124)
T ss_dssp HTBCTTTSSBCSSEEE-CTTSCEEEHHHHHHHHH---TTCCBCTTTCCBC
T ss_pred CCCCCcCChHHcCcEE-eeCCCcccHHHHHHHHh---HCcCCCCCCCccC
Confidence 45799997742 2222 27999999999975433 2345899998764
No 118
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=30.68 E-value=22 Score=29.04 Aligned_cols=43 Identities=23% Similarity=0.550 Sum_probs=29.3
Q ss_pred cccccccccCC-eeEeCCCCCCccccccCCCCCCCCCCCCcccccccccc
Q psy5116 333 DDHCRVCHRVG-ELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHK 381 (422)
Q Consensus 333 dd~C~vC~~gG-~ll~Cd~Cp~afHl~Cl~Ppl~~iP~g~W~C~~C~~~k 381 (422)
+..|.+|...- +-+.-..|.-.|+..|+...+. ..||.|+..-
T Consensus 22 ~~~C~IC~~~~~~pv~~~~CgH~fC~~Ci~~~~~------~~CP~Cr~~~ 65 (117)
T 1jm7_B 22 LLRCSRCTNILREPVCLGGCEHIFCSNCVSDCIG------TGCPVCYTPA 65 (117)
T ss_dssp TTSCSSSCSCCSSCBCCCSSSCCBCTTTGGGGTT------TBCSSSCCBC
T ss_pred CCCCCCCChHhhCccEeCCCCCHHHHHHHHHHhc------CCCcCCCCcC
Confidence 45799997743 2222226899999999874433 4799998753
No 119
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=29.66 E-value=6.5 Score=31.52 Aligned_cols=48 Identities=23% Similarity=0.411 Sum_probs=30.4
Q ss_pred cccccccccCCeeEeCCCCCCccccccCCCCCCCCCCCCcccccccccc
Q psy5116 333 DDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHK 381 (422)
Q Consensus 333 dd~C~vC~~gG~ll~Cd~Cp~afHl~Cl~Ppl~~iP~g~W~C~~C~~~k 381 (422)
...|.+|...-.-..--.|...||..|+...+... .+...||.|+..-
T Consensus 21 ~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~-~~~~~CP~Cr~~~ 68 (112)
T 1jm7_A 21 ILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQK-KGPSQCPLCKNDI 68 (112)
T ss_dssp HTSCSSSCCCCSSCCBCTTSCCCCSHHHHHHHHSS-SSSCCCTTTSCCC
T ss_pred CCCCcccChhhcCeEECCCCCHHHHHHHHHHHHhC-CCCCCCcCCCCcC
Confidence 34699997742211113699999999987443321 2346899997753
No 120
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=29.45 E-value=5.9 Score=29.84 Aligned_cols=50 Identities=16% Similarity=0.475 Sum_probs=31.0
Q ss_pred cccccccccccCC-eeEeCCCCCCccccccCCCCCCC--CCCCCcccccccccc
Q psy5116 331 QYDDHCRVCHRVG-ELLCCETCPAVFHLECVDPPLRD--VPQEDWQCNLCKAHK 381 (422)
Q Consensus 331 ~~dd~C~vC~~gG-~ll~Cd~Cp~afHl~Cl~Ppl~~--iP~g~W~C~~C~~~k 381 (422)
..+..|.+|...- +.+. -.|.-.||..|+...+.. ...+...||.|+..-
T Consensus 17 ~~~~~C~IC~~~~~~p~~-~~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~ 69 (85)
T 2ecv_A 17 KEEVTCPICLELLTQPLS-LDCGHSFCQACLTANHKKSMLDKGESSCPVCRISY 69 (85)
T ss_dssp CCCCCCTTTCSCCSSCBC-CSSSCCBCTTHHHHHHHHHHHTTSCCCCTTTCCSS
T ss_pred cCCCCCCCCCcccCCcee-CCCCCHHHHHHHHHHHHHhhcCCCCCcCCCCCCcc
Confidence 3456799998742 2122 269999999998643221 012356799997653
No 121
>1weo_A Cellulose synthase, catalytic subunit (IRX3); structure genomics, ring-finger, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.44.1.1
Probab=28.45 E-value=6.7 Score=32.15 Aligned_cols=47 Identities=19% Similarity=0.565 Sum_probs=35.9
Q ss_pred ccccccccccC------Ce-eEeCCCCCCccccccCCCCCCCCCCCCcccccccccc
Q psy5116 332 YDDHCRVCHRV------GE-LLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHK 381 (422)
Q Consensus 332 ~dd~C~vC~~g------G~-ll~Cd~Cp~afHl~Cl~Ppl~~iP~g~W~C~~C~~~k 381 (422)
+..+|.+|++. |+ .+-|..|.-.....|+. -...+|.-.||.|....
T Consensus 15 ~~qiCqiCGD~VG~~~~Ge~FVAC~eC~FPvCrpCyE---YErkeG~q~CpqCktrY 68 (93)
T 1weo_A 15 DGQFCEICGDQIGLTVEGDLFVACNECGFPACRPCYE---YERREGTQNCPQCKTRY 68 (93)
T ss_dssp SSCBCSSSCCBCCBCSSSSBCCSCSSSCCCCCHHHHH---HHHHTSCSSCTTTCCCC
T ss_pred CCCccccccCccccCCCCCEEEeeeccCChhhHHHHH---HHHhccCccccccCCcc
Confidence 45689999883 44 57899998888888886 34556788999997653
No 122
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=28.11 E-value=4.3 Score=33.23 Aligned_cols=45 Identities=24% Similarity=0.638 Sum_probs=32.4
Q ss_pred ccccccccccC-------CeeEeCCCCCCccccccCCCCCCCCCCCCccccccccc
Q psy5116 332 YDDHCRVCHRV-------GELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAH 380 (422)
Q Consensus 332 ~dd~C~vC~~g-------G~ll~Cd~Cp~afHl~Cl~Ppl~~iP~g~W~C~~C~~~ 380 (422)
....|.+|... +..+..-.|.-.||..|+...+.. ...||.|+..
T Consensus 71 ~~~~C~iC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~----~~~CP~Cr~~ 122 (133)
T 4ap4_A 71 GTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKN----ANTCPTCRKK 122 (133)
T ss_dssp SSCBCTTTCCBHHHHHHTTCCEEEETTSBEEEHHHHHHHHHH----CSBCTTTCCB
T ss_pred CCCCCCCCCCccccccccCcceEeCCCCChhhHHHHHHHHHc----CCCCCCCCCc
Confidence 34569999763 334456689999999999865543 2489999765
No 123
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=26.95 E-value=4.9 Score=29.01 Aligned_cols=45 Identities=22% Similarity=0.504 Sum_probs=27.2
Q ss_pred cccccccccccCC-eeEeCCCCCCccccccCCCCCCCCCCCCcccccc
Q psy5116 331 QYDDHCRVCHRVG-ELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLC 377 (422)
Q Consensus 331 ~~dd~C~vC~~gG-~ll~Cd~Cp~afHl~Cl~Ppl~~iP~g~W~C~~C 377 (422)
..+..|.+|...- +.+.. .|.-.||..|+...+.. ......||.|
T Consensus 18 ~~~~~C~IC~~~~~~p~~~-~CgH~fC~~Ci~~~~~~-~~~~~~CP~C 63 (63)
T 2ysj_A 18 QEEVICPICLDILQKPVTI-DCGHNFCLKCITQIGET-SCGFFKCPLC 63 (63)
T ss_dssp CCCCBCTTTCSBCSSCEEC-TTSSEECHHHHHHHHHH-CSSCCCCSCC
T ss_pred ccCCCCCcCCchhCCeEEe-CCCCcchHHHHHHHHHc-CCCCCcCcCC
Confidence 4456899997742 22222 78999999998744321 1123457766
No 124
>2d8v_A Zinc finger FYVE domain-containing protein 19; zfyve19, ZF- B_BOX, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.43.1.1
Probab=26.11 E-value=27 Score=27.03 Aligned_cols=17 Identities=29% Similarity=0.886 Sum_probs=11.0
Q ss_pred ccccccccCCeeEeCCCC
Q psy5116 334 DHCRVCHRVGELLCCETC 351 (422)
Q Consensus 334 d~C~vC~~gG~ll~Cd~C 351 (422)
..|.+|..... |-|.+|
T Consensus 9 pWC~ICneDAt-lrC~gC 25 (67)
T 2d8v_A 9 PWCCICNEDAT-LRCAGC 25 (67)
T ss_dssp SSCTTTCSCCC-EEETTT
T ss_pred CeeEEeCCCCe-EEecCC
Confidence 36888877654 456666
No 125
>2ebv_A Nuclear pore complex protein NUP153; ZF-ranbp domain, nucleoporin NUP153, 153 kDa nucleoporin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=25.17 E-value=49 Score=24.69 Aligned_cols=28 Identities=18% Similarity=0.528 Sum_probs=21.0
Q ss_pred CCCCCCCCcccccccccccCCcccCCch
Q psy5116 364 LRDVPQEDWQCNLCKAHKVTGVTDCLPD 391 (422)
Q Consensus 364 l~~iP~g~W~C~~C~~~k~~g~~dc~~~ 391 (422)
+...+.|.|-|..|..........|+-+
T Consensus 24 ~FK~~~GsWeC~~C~V~N~a~~~kC~AC 51 (57)
T 2ebv_A 24 KFKRPIGSWECSVCCVSNNAEDNKCVSC 51 (57)
T ss_dssp CCCCCSSSCCCSSSCCCCCSSCSBCSSS
T ss_pred hcCCCCCeeeCCeeEccCccCCceeeEc
Confidence 3466778999999998876666666654
No 126
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=24.82 E-value=11 Score=29.71 Aligned_cols=46 Identities=17% Similarity=0.329 Sum_probs=31.7
Q ss_pred ccccccccccC-CeeEeCCCCCCccccccCCCCCCCCCCCCcccccccccc
Q psy5116 332 YDDHCRVCHRV-GELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHK 381 (422)
Q Consensus 332 ~dd~C~vC~~g-G~ll~Cd~Cp~afHl~Cl~Ppl~~iP~g~W~C~~C~~~k 381 (422)
.+..|.+|... .+-+..-.|...||..|+...+.. .-.||.|+..-
T Consensus 21 ~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~----~~~CP~Cr~~~ 67 (99)
T 2y43_A 21 DLLRCGICFEYFNIAMIIPQCSHNYCSLCIRKFLSY----KTQCPTCCVTV 67 (99)
T ss_dssp HHTBCTTTCSBCSSEEECTTTCCEEEHHHHHHHHTT----CCBCTTTCCBC
T ss_pred CCCCcccCChhhCCcCEECCCCCHhhHHHHHHHHHC----CCCCCCCCCcC
Confidence 34579999874 333444579999999998754432 24799997753
No 127
>1zbd_B Rabphilin-3A; G protein, effector, RABCDR, synaptic exocytosis, RAB protein, RAB3A; HET: GTP; 2.60A {Rattus norvegicus} SCOP: g.50.1.1
Probab=24.32 E-value=28 Score=30.02 Aligned_cols=50 Identities=20% Similarity=0.585 Sum_probs=35.0
Q ss_pred ccccccccccC-----CeeEeCCCCCCccccccCCCCCCCCCCCCcccccccccc
Q psy5116 332 YDDHCRVCHRV-----GELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHK 381 (422)
Q Consensus 332 ~dd~C~vC~~g-----G~ll~Cd~Cp~afHl~Cl~Ppl~~iP~g~W~C~~C~~~k 381 (422)
++..|.+|+.. +.-..|..|..-+-..|-.-....-....|.|..|....
T Consensus 54 ~~~~C~~C~~~~g~l~~~g~~C~~C~~~VC~~C~~~~~~~~~~~~W~C~vC~k~r 108 (134)
T 1zbd_B 54 GVNRCILCGEQLGMLGSASVVCEDCKKNVCTKCGVETSNNRPHPVWLCKICLEQR 108 (134)
T ss_dssp SSSBCSSSCCBCSTTSCCEEECTTTCCEEETTSEEECCCSSSSCCEEEHHHHHHH
T ss_pred CCccccccCCCcccccCCCCCCCCCCcccccccCCccCCCCCccceechhhHHHH
Confidence 45679999873 345689999988888887632222233479999997654
No 128
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=24.20 E-value=17 Score=28.08 Aligned_cols=49 Identities=16% Similarity=0.549 Sum_probs=31.8
Q ss_pred ccccccccccccC-CeeEeCCCCCCccccccCCCCCCCCCCCCccccccccc
Q psy5116 330 FQYDDHCRVCHRV-GELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAH 380 (422)
Q Consensus 330 ~~~dd~C~vC~~g-G~ll~Cd~Cp~afHl~Cl~Ppl~~iP~g~W~C~~C~~~ 380 (422)
...+..|.+|... .+-+....|...|+..|+...+.. .+...||.|+..
T Consensus 10 ~~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~--~~~~~CP~Cr~~ 59 (92)
T 3ztg_A 10 IPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTALLE--SDEHTCPTCHQN 59 (92)
T ss_dssp CCTTTEETTTTEECSSCEECTTTCCEECHHHHHHHHHH--CTTCCCTTTCCS
T ss_pred CCcCCCCCCCChhhcCceECCCCCCHHHHHHHHHHHHh--cCCCcCcCCCCc
Confidence 3445689999873 233333449999999998744321 123589999876
No 129
>2a20_A Regulating synaptic membrane exocytosis protein 2; zinc-finger domain, metal binding protein; NMR {Rattus norvegicus} PDB: 2cjs_C
Probab=24.02 E-value=11 Score=28.70 Aligned_cols=49 Identities=27% Similarity=0.661 Sum_probs=29.1
Q ss_pred cccccccccC----CeeEeCCCCCCccccccCCCCCCCCCCCCcccccccccc
Q psy5116 333 DDHCRVCHRV----GELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHK 381 (422)
Q Consensus 333 dd~C~vC~~g----G~ll~Cd~Cp~afHl~Cl~Ppl~~iP~g~W~C~~C~~~k 381 (422)
...|.+|++. |---.|.-|..-+-..|-+-.-.....-.|.|..|...+
T Consensus 9 ~~~C~iC~KTKFADG~Gh~C~yCk~r~CaRCGg~v~lr~~k~~WvC~lC~k~q 61 (62)
T 2a20_A 9 APTCGICHKTKFADGCGHNCSYCQTKFCARCGGRVSLRSNKVMWVCNLCRKQQ 61 (62)
T ss_dssp CCCCSSSSCSCCCSSCCEEBTTTCCEECTTSEEEEESSTTCEEEEEHHHHHHT
T ss_pred cchhhhhccceeccCCCccccccCCeeecccCCEeeecCCeEEEEehhhhhcc
Confidence 3479999872 333456666666666664421111122369999997643
No 130
>2ebr_A Nuclear pore complex protein NUP153; ZF-ranbp domain, nucleoporin NUP153, 153 kDa nucleoporin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=24.01 E-value=63 Score=23.11 Aligned_cols=29 Identities=28% Similarity=0.700 Sum_probs=21.6
Q ss_pred CCCCCCCcccccccccccCCcccCCchhh
Q psy5116 365 RDVPQEDWQCNLCKAHKVTGVTDCLPDVE 393 (422)
Q Consensus 365 ~~iP~g~W~C~~C~~~k~~g~~dc~~~~e 393 (422)
...+.|.|-|..|..........|+-...
T Consensus 5 fk~~~gsW~C~~C~v~N~a~~~kC~aC~~ 33 (47)
T 2ebr_A 5 SSGPEGSWDCELCLVQNKADSTKCLACES 33 (47)
T ss_dssp CSSCCSSCCCSSSCCCCCSSCSBCSSSCC
T ss_pred ccCCCCeeECCeeecCCcCCcceecCcCC
Confidence 35567899999999887666677766543
No 131
>2enn_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=23.19 E-value=36 Score=26.22 Aligned_cols=29 Identities=34% Similarity=0.848 Sum_probs=23.8
Q ss_pred ccccccccc-----CCeeEeCCCCCCccccccCC
Q psy5116 333 DDHCRVCHR-----VGELLCCETCPAVFHLECVD 361 (422)
Q Consensus 333 dd~C~vC~~-----gG~ll~Cd~Cp~afHl~Cl~ 361 (422)
-.+|.+|++ .-+-+.|..|....|..|+.
T Consensus 34 pt~C~~C~~~lwGl~kqG~~C~~C~~~~Hk~C~~ 67 (77)
T 2enn_A 34 PTFCSVCHEFVWGLNKQGYQCRQCNAAIHKKCID 67 (77)
T ss_dssp CEECSSSCCEECCTTCCEEECSSSCCEEESGGGS
T ss_pred CcCccccChhhccccccccCcCCCCCcCCHhHHh
Confidence 347999977 23678999999999999987
No 132
>2ebq_A Nuclear pore complex protein NUP153; ZF-ranbp domain, nucleoporin NUP153, 153 kDa nucleoporin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.85 E-value=55 Score=23.48 Aligned_cols=28 Identities=14% Similarity=0.450 Sum_probs=20.8
Q ss_pred CCCCCCcccccccccccCCcccCCchhh
Q psy5116 366 DVPQEDWQCNLCKAHKVTGVTDCLPDVE 393 (422)
Q Consensus 366 ~iP~g~W~C~~C~~~k~~g~~dc~~~~e 393 (422)
..+.|.|-|..|..........|.-...
T Consensus 6 ~~~~g~W~C~~C~v~N~a~~~kC~aCet 33 (47)
T 2ebq_A 6 SGVIGTWDCDTCLVQNKPEAIKCVACET 33 (47)
T ss_dssp CCCSSSEECSSSCCEECSSCSBCSSSCC
T ss_pred CCCCCceECCeeeccCccCCceecCcCC
Confidence 4567899999998887666667766544
No 133
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=21.40 E-value=21 Score=27.64 Aligned_cols=46 Identities=22% Similarity=0.390 Sum_probs=30.4
Q ss_pred ccccccccccCCe-----eEeCCCCCCccccccCCCCCCCCCCCCcccccccccc
Q psy5116 332 YDDHCRVCHRVGE-----LLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHK 381 (422)
Q Consensus 332 ~dd~C~vC~~gG~-----ll~Cd~Cp~afHl~Cl~Ppl~~iP~g~W~C~~C~~~k 381 (422)
.+..|.||...-. ++-| .|+-.|+..|+.--+. .+...||.|+..-
T Consensus 10 ~~~~CpICle~~~~~d~~~~p~-~CGH~fC~~Cl~~~~~---~~~~~CP~CR~~~ 60 (78)
T 1e4u_A 10 DPVECPLCMEPLEIDDINFFPC-TCGYQICRFCWHRIRT---DENGLCPACRKPY 60 (78)
T ss_dssp CCCBCTTTCCBCCTTTTTCCSS-TTSCCCCHHHHHHHTT---SSCSBCTTTCCBC
T ss_pred cCCcCCccCccCcccccccccc-CCCCCcCHHHHHHHHh---cCCCCCCCCCCcc
Confidence 3457999987321 1122 4888999999864332 2467899998765
No 134
>2enz_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=21.40 E-value=43 Score=24.76 Aligned_cols=28 Identities=25% Similarity=0.660 Sum_probs=23.0
Q ss_pred ccccccccC-----CeeEeCCCCCCccccccCC
Q psy5116 334 DHCRVCHRV-----GELLCCETCPAVFHLECVD 361 (422)
Q Consensus 334 d~C~vC~~g-----G~ll~Cd~Cp~afHl~Cl~ 361 (422)
.+|.+|+.- -+-+.|..|....|..|..
T Consensus 24 t~C~~C~~~l~Gl~~qg~~C~~C~~~~Hk~C~~ 56 (65)
T 2enz_A 24 TFCEHCGTLLWGLARQGLKCDACGMNVHHRCQT 56 (65)
T ss_dssp CBCSSSCCBCCCSSSCSEEESSSCCEECTTTTT
T ss_pred cCchhcChhheecCCcccccCCCCCccCHhHHh
Confidence 478888772 2568899999999999986
No 135
>1faq_A RAF-1; transferase, serine/threonine-protein kinase, proto- oncogene, zinc, ATP-binding, phorbol-ester binding; NMR {Homo sapiens} SCOP: g.49.1.1 PDB: 1far_A
Probab=21.15 E-value=60 Score=22.59 Aligned_cols=28 Identities=29% Similarity=0.763 Sum_probs=22.4
Q ss_pred ccccccccC-CeeEeCCCCCCccccccCC
Q psy5116 334 DHCRVCHRV-GELLCCETCPAVFHLECVD 361 (422)
Q Consensus 334 d~C~vC~~g-G~ll~Cd~Cp~afHl~Cl~ 361 (422)
.+|.+|++- -+-+.|..|....|..|..
T Consensus 15 t~C~~C~~~l~qG~~C~~C~~~~H~~C~~ 43 (52)
T 1faq_A 15 AFCDICQKFLLNGFRCQTCGYKFHEHCST 43 (52)
T ss_dssp EECTTSSSEECSEEECTTTTCCBCSTTSS
T ss_pred cCCCCcccccccCCEeCCCCCeEChhHHh
Confidence 468888662 2567999999999999987
No 136
>1z6u_A NP95-like ring finger protein isoform B; structural genomics consortium, ligase, ubiquitin-protein ligase, cell cycle regulation, SGC; 2.10A {Homo sapiens}
Probab=20.98 E-value=9.5 Score=33.11 Aligned_cols=45 Identities=13% Similarity=0.462 Sum_probs=30.4
Q ss_pred cccccccccCC-eeEeCCCCCCccccccCCCCCCCCCCCCcccccccccc
Q psy5116 333 DDHCRVCHRVG-ELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHK 381 (422)
Q Consensus 333 dd~C~vC~~gG-~ll~Cd~Cp~afHl~Cl~Ppl~~iP~g~W~C~~C~~~k 381 (422)
+..|.+|...- +-+. -.|.-.|+..|+...+.. +...||.|+..-
T Consensus 78 ~~~C~IC~~~~~~pv~-~~CgH~fC~~Ci~~~~~~---~~~~CP~Cr~~~ 123 (150)
T 1z6u_A 78 SFMCVCCQELVYQPVT-TECFHNVCKDCLQRSFKA---QVFSCPACRHDL 123 (150)
T ss_dssp HTBCTTTSSBCSSEEE-CTTSCEEEHHHHHHHHHT---TCCBCTTTCCBC
T ss_pred CCEeecCChhhcCCEE-cCCCCchhHHHHHHHHHh---CCCcCCCCCccC
Confidence 45799997742 2222 479999999998744332 345799998764
No 137
>3gj5_B Nuclear pore complex protein NUP153; G protein, GDP, RAN, zinc finger, acetylation, cytoplasm, GTP-binding, HOST-virus interaction; HET: GDP; 1.79A {Rattus norvegicus} SCOP: g.41.11.1
Probab=20.73 E-value=37 Score=22.75 Aligned_cols=25 Identities=20% Similarity=0.662 Sum_probs=18.0
Q ss_pred CCCCcccccccccccCCcccCCchh
Q psy5116 368 PQEDWQCNLCKAHKVTGVTDCLPDV 392 (422)
Q Consensus 368 P~g~W~C~~C~~~k~~g~~dc~~~~ 392 (422)
..|.|-|..|..........|+-..
T Consensus 4 ~~G~W~C~~C~v~N~~~~~kC~aCe 28 (34)
T 3gj5_B 4 GSGSWDCEVCLVQNKADSTKCIACE 28 (34)
T ss_dssp --CCEECTTTCCEECSSCSBCTTTC
T ss_pred CCCceECCeeEeECccccCEEcccC
Confidence 4689999999988766666776653
No 138
>2yuu_A NPKC-delta, protein kinase C delta type; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.18 E-value=40 Score=26.22 Aligned_cols=28 Identities=32% Similarity=0.837 Sum_probs=23.3
Q ss_pred ccccccccC-----CeeEeCCCCCCccccccCC
Q psy5116 334 DHCRVCHRV-----GELLCCETCPAVFHLECVD 361 (422)
Q Consensus 334 d~C~vC~~g-----G~ll~Cd~Cp~afHl~Cl~ 361 (422)
.+|.+|+.- -+-+.|..|....|..|..
T Consensus 29 t~C~~C~~~lwGl~kqg~~C~~C~~~~Hk~C~~ 61 (83)
T 2yuu_A 29 TFCSVCKDFVWGLNKQGYKCRQCNAAIHKKCID 61 (83)
T ss_dssp CCCSSSCCCCCSSSCCEEEETTTCCEECTTGGG
T ss_pred cChhhcChhhccccccccccCCcCCeeChhhhh
Confidence 479999772 2578899999999999987
Done!