Your job contains 1 sequence.
>psy5116
MYGRIKRRGRPPKTPNTERPKFQVHLLKKPQYLQNLEARGLNSPITSRTSSPQGSETSRR
STAKKGTKRKSNPPTRGGRGGNQKRKQTLETDYHYGSDFEDSTDHDDDLGLSESETEPEK
DDPLDEMSDSDLSLSSFSTTSGTNKKFSYISRMSPEPLWLQTERQIQPLELPRSSDDLLI
PREYVMQTLSIYEVLRHFKSLIRLSPFRFEDFCAVLNFEEQSNLLVEIHVSLLKTIFREE
DTQQTHFGPLDQKDSANSVLYFIDAMTWPEALRSYIESDKTFDEEVLNILNTCEYPFTNI
EKRLRVLQFLTDQILITSPVREDLIHEGGFQYDDHCRVCHRVGELLCCETCPAVFHLECV
DPPLRDVPQEDWQCNLCKAHKVTGVTDCLPDVEKSGLLCRQEHLGFDRAGRKYWFLSRRI
FM
The BLAST search returned 11 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy5116
(422 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0000541 - symbol:E(bx) "Enhancer of bithorax" spec... 977 2.0e-108 2
UNIPROTKB|F5GXF5 - symbol:BPTF "Nucleosome-remodeling fac... 861 3.2e-87 3
UNIPROTKB|Q12830 - symbol:BPTF "Nucleosome-remodeling fac... 861 9.8e-87 3
UNIPROTKB|F1LWS6 - symbol:F1LWS6 "Uncharacterized protein... 854 2.4e-85 1
UNIPROTKB|E1C5C7 - symbol:BPTF "Uncharacterized protein" ... 863 1.3e-84 1
UNIPROTKB|E1C5C8 - symbol:BPTF "Uncharacterized protein" ... 863 1.3e-84 1
UNIPROTKB|F1PFZ4 - symbol:BPTF "Uncharacterized protein" ... 862 1.5e-84 1
UNIPROTKB|J9JHE8 - symbol:BPTF "Uncharacterized protein" ... 862 1.7e-84 1
UNIPROTKB|E7ETD6 - symbol:BPTF "Nucleosome-remodeling fac... 861 2.0e-84 1
UNIPROTKB|F1N3U7 - symbol:BPTF "Uncharacterized protein" ... 861 2.2e-84 1
UNIPROTKB|F1LX76 - symbol:F1LX76 "Uncharacterized protein... 854 1.2e-83 1
UNIPROTKB|F1M1V5 - symbol:F1M1V5 "Uncharacterized protein... 854 1.3e-83 1
UNIPROTKB|F1M1V4 - symbol:F1M1V4 "Uncharacterized protein... 854 1.3e-83 1
WB|WBGene00009180 - symbol:nurf-1 species:6239 "Caenorhab... 466 8.6e-44 2
TAIR|locus:2162509 - symbol:AT5G22760 "AT5G22760" species... 173 2.8e-16 3
UNIPROTKB|J3QQU3 - symbol:PHF12 "PHD finger protein 12" s... 142 5.2e-11 2
UNIPROTKB|B1AHC5 - symbol:PHF21B "cDNA FLJ34161 fis, clon... 157 1.7e-10 2
UNIPROTKB|F1SJU8 - symbol:PHF21B "Uncharacterized protein... 162 3.0e-10 2
POMBASE|SPAC2F7.07c - symbol:cph2 "Clr6 histone deacetyla... 175 3.4e-10 1
UNIPROTKB|Q5TH12 - symbol:ZMYND8 "Protein kinase C-bindin... 150 5.0e-10 1
UNIPROTKB|C9JFR1 - symbol:AIRE "Autoimmune regulator" spe... 162 5.9e-10 1
UNIPROTKB|Q96EK2 - symbol:PHF21B "PHD finger protein 21B"... 157 1.2e-09 2
UNIPROTKB|F1NH78 - symbol:F1NH78 "Uncharacterized protein... 174 1.8e-09 1
ZFIN|ZDB-GENE-071008-4 - symbol:aire "autoimmune regulato... 167 2.0e-09 1
SGD|S000004680 - symbol:RCO1 "Essential subunit of the hi... 165 2.2e-09 2
UNIPROTKB|O43918 - symbol:AIRE "Autoimmune regulator" spe... 162 2.4e-09 2
UNIPROTKB|C9JL37 - symbol:AIRE "Autoimmune regulator" spe... 162 2.9e-09 1
UNIPROTKB|E9PU01 - symbol:Chd4 "Protein Chd4" species:101... 167 3.2e-09 2
RGD|1311139 - symbol:Aire "autoimmune regulator" species:... 165 3.7e-09 1
MGI|MGI:1338803 - symbol:Aire "autoimmune regulator (auto... 165 3.8e-09 1
UNIPROTKB|F5GWX5 - symbol:CHD4 "Chromodomain-helicase-DNA... 167 4.0e-09 2
MGI|MGI:1344380 - symbol:Chd4 "chromodomain helicase DNA ... 167 4.0e-09 2
UNIPROTKB|I3LQA6 - symbol:AIRE "Uncharacterized protein" ... 166 6.3e-09 2
UNIPROTKB|J9NRN3 - symbol:CHD5 "Uncharacterized protein" ... 167 6.7e-09 1
UNIPROTKB|F2Z2R5 - symbol:CHD5 "Chromodomain-helicase-DNA... 167 6.9e-09 1
UNIPROTKB|F1NME8 - symbol:Gga.29865 "Uncharacterized prot... 166 8.6e-09 1
UNIPROTKB|F1SSZ2 - symbol:CHD5 "Uncharacterized protein" ... 167 9.9e-09 1
UNIPROTKB|F1PPM4 - symbol:AIRE "Uncharacterized protein" ... 161 1.0e-08 1
UNIPROTKB|F1RIM3 - symbol:CHD5 "Uncharacterized protein" ... 167 1.0e-08 1
ZFIN|ZDB-GENE-030131-2199 - symbol:prkcbp1l "protein kina... 165 1.0e-08 1
UNIPROTKB|E2R1M3 - symbol:CHD5 "Uncharacterized protein" ... 167 1.1e-08 1
UNIPROTKB|Q9ULU4 - symbol:ZMYND8 "Protein kinase C-bindin... 165 1.1e-08 1
UNIPROTKB|F1MY77 - symbol:ZMYND8 "Uncharacterized protein... 165 1.1e-08 1
UNIPROTKB|F5H0X3 - symbol:ZMYND8 "Protein kinase C-bindin... 165 1.2e-08 1
ZFIN|ZDB-GENE-030131-4532 - symbol:chd4b "chromodomain he... 167 1.2e-08 1
UNIPROTKB|Q8TDI0 - symbol:CHD5 "Chromodomain-helicase-DNA... 167 1.2e-08 1
UNIPROTKB|E2RHA0 - symbol:CHD4 "Uncharacterized protein" ... 167 1.3e-08 2
UNIPROTKB|Q14839 - symbol:CHD4 "Chromodomain-helicase-DNA... 167 1.3e-08 2
UNIPROTKB|J9NW81 - symbol:CHD4 "Uncharacterized protein" ... 167 1.3e-08 2
UNIPROTKB|F1LM59 - symbol:Chd4 "Protein Chd4" species:101... 167 1.4e-08 2
ZFIN|ZDB-GENE-041119-1 - symbol:zmynd8 "zinc finger, MYND... 164 1.4e-08 1
UNIPROTKB|F1SLR5 - symbol:CHD4 "Uncharacterized protein" ... 167 1.7e-08 2
UNIPROTKB|F1N3F6 - symbol:CHD4 "Uncharacterized protein" ... 167 1.7e-08 2
UNIPROTKB|F1MFF9 - symbol:Bt.62145 "Uncharacterized prote... 165 1.9e-08 1
RGD|1582725 - symbol:Chd5 "chromodomain helicase DNA bind... 165 2.0e-08 1
UNIPROTKB|F1NX82 - symbol:PHF21B "Uncharacterized protein... 157 2.0e-08 1
FB|FBgn0023395 - symbol:Chd3 "Chd3" species:7227 "Drosoph... 161 2.1e-08 1
ZFIN|ZDB-GENE-040724-145 - symbol:trim66 "tripartite moti... 161 2.8e-08 1
UNIPROTKB|H7C4X9 - symbol:ZMYND8 "Protein kinase C-bindin... 160 3.6e-08 1
UNIPROTKB|K7EQP5 - symbol:PHF12 "PHD finger protein 12" s... 133 3.6e-08 1
UNIPROTKB|F1NH79 - symbol:CHD4 "Uncharacterized protein" ... 162 4.1e-08 1
FB|FBgn0262519 - symbol:Mi-2 species:7227 "Drosophila mel... 165 4.8e-08 2
UNIPROTKB|E1BIC4 - symbol:AIRE "Uncharacterized protein" ... 155 5.0e-08 1
UNIPROTKB|F1SNJ6 - symbol:LOC100620590 "Uncharacterized p... 149 6.4e-08 1
UNIPROTKB|D4A9U0 - symbol:Phf21b "PHD finger protein 21B ... 153 7.6e-08 2
UNIPROTKB|D5LMF5 - symbol:zmynd8 "Zinc finger and MYND do... 164 7.7e-08 2
DICTYBASE|DDB_G0277341 - symbol:DDB_G0277341 "PHD zinc fi... 156 7.8e-08 1
UNIPROTKB|K7EJ43 - symbol:PHF12 "PHD finger protein 12" s... 142 8.2e-08 1
ZFIN|ZDB-GENE-030131-6456 - symbol:phf21ab "PHD finger pr... 158 8.5e-08 2
RGD|1308739 - symbol:Phf21b "PHD finger protein 21B" spec... 153 8.6e-08 2
UNIPROTKB|F1NMG7 - symbol:F1NMG7 "Uncharacterized protein... 153 8.9e-08 1
UNIPROTKB|I3LDB0 - symbol:I3LDB0 "Uncharacterized protein... 153 9.1e-08 2
FB|FBgn0029861 - symbol:CG3815 species:7227 "Drosophila m... 155 9.5e-08 1
UNIPROTKB|H7C2H0 - symbol:CHD3 "Chromodomain-helicase-DNA... 152 9.6e-08 1
UNIPROTKB|F1M0S9 - symbol:Zmynd8 "Protein Zmynd8" species... 165 1.1e-07 2
UNIPROTKB|F1M5S0 - symbol:RGD1560612 "Protein RGD1560612"... 152 1.1e-07 1
UNIPROTKB|H0YF52 - symbol:TRIM66 "Tripartite motif-contai... 146 1.2e-07 1
MGI|MGI:2443812 - symbol:Phf21b "PHD finger protein 21B" ... 151 1.2e-07 2
UNIPROTKB|F1P5P6 - symbol:PHF21A "Uncharacterized protein... 153 1.4e-07 2
UNIPROTKB|F1NP02 - symbol:PHF21A "Uncharacterized protein... 153 1.4e-07 2
UNIPROTKB|F1LPP8 - symbol:Chd3 "Protein Chd3" species:101... 152 1.5e-07 1
UNIPROTKB|F1PQV6 - symbol:PHF21A "Uncharacterized protein... 153 1.6e-07 2
UNIPROTKB|Q96BD5 - symbol:PHF21A "PHD finger protein 21A"... 153 1.6e-07 2
UNIPROTKB|F1MS13 - symbol:PHF21A "Uncharacterized protein... 153 1.6e-07 2
UNIPROTKB|F1N7W5 - symbol:LOC788840 "Uncharacterized prot... 147 1.9e-07 2
ZFIN|ZDB-GENE-041111-187 - symbol:chd4a "chromodomain hel... 161 2.0e-07 2
UNIPROTKB|F1SBF4 - symbol:ZMYND8 "Uncharacterized protein... 150 3.6e-07 1
RGD|1560612 - symbol:Phf21a "PHD finger protein 21A" spec... 149 3.8e-07 2
UNIPROTKB|F1PT90 - symbol:TRIM66 "Uncharacterized protein... 148 3.9e-07 2
UNIPROTKB|I3LF49 - symbol:I3LF49 "Uncharacterized protein... 147 4.2e-07 1
UNIPROTKB|B7ZM62 - symbol:ZMYND8 "ZMYND8 protein" species... 150 4.3e-07 1
UNIPROTKB|F1NRM1 - symbol:F1NRM1 "Uncharacterized protein... 146 4.7e-07 1
UNIPROTKB|Q2HXV1 - symbol:ZMYND8 "RACK7 isoform l" specie... 150 4.7e-07 1
UNIPROTKB|Q2HXV3 - symbol:ZMYND8 "Protein kinase C-bindin... 150 4.7e-07 1
UNIPROTKB|E2R8R1 - symbol:ZMYND8 "Uncharacterized protein... 150 4.7e-07 1
ZFIN|ZDB-GENE-030131-2773 - symbol:trim33 "tripartite mot... 150 4.9e-07 1
UNIPROTKB|J3KPU3 - symbol:ZMYND8 "Protein kinase C-bindin... 150 4.9e-07 1
MGI|MGI:2384756 - symbol:Phf21a "PHD finger protein 21A" ... 149 5.2e-07 2
RGD|1311923 - symbol:Chd3 "chromodomain helicase DNA bind... 152 5.2e-07 1
UNIPROTKB|F1N544 - symbol:CHD3 "Uncharacterized protein" ... 152 5.4e-07 1
WARNING: Descriptions of 127 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0000541 [details] [associations]
symbol:E(bx) "Enhancer of bithorax" species:7227 "Drosophila
melanogaster" [GO:0042766 "nucleosome mobilization"
evidence=IDA;TAS] [GO:0006351 "transcription, DNA-dependent"
evidence=IMP;IDA] [GO:0016589 "NURF complex" evidence=NAS;IDA;TAS]
[GO:0006334 "nucleosome assembly" evidence=NAS] [GO:0030097
"hemopoiesis" evidence=IMP] [GO:0006338 "chromatin remodeling"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0035076 "ecdysone
receptor-mediated signaling pathway" evidence=IGI] [GO:0035073
"pupariation" evidence=IMP] [GO:0016922 "ligand-dependent nuclear
receptor binding" evidence=IPI] [GO:0048813 "dendrite
morphogenesis" evidence=IMP] [GO:0006325 "chromatin organization"
evidence=IMP] [GO:0045747 "positive regulation of Notch signaling
pathway" evidence=IGI;IMP] [GO:0007095 "mitotic G2 DNA damage
checkpoint" evidence=IGI] [GO:0046331 "lateral inhibition"
evidence=IMP] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR017956 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016 SMART:SM00249
SMART:SM00297 SMART:SM00384 GO:GO:0007095 EMBL:AE014296
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0045747 GO:GO:0006351 GO:GO:0048813 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0030097
GO:GO:0046331 GO:GO:0035073 InterPro:IPR019786 PROSITE:PS01359
GO:GO:0035076 GO:GO:0042766 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 eggNOG:COG5076 InterPro:IPR018359 GO:GO:0016589
InterPro:IPR004022 InterPro:IPR018500 InterPro:IPR018501
Pfam:PF02791 SMART:SM00571 PROSITE:PS50827 KO:K11728 OMA:DVIMEDF
GeneTree:ENSGT00660000095339 EMBL:AF417921 EMBL:AY051776
EMBL:BT023142 EMBL:BT022131 RefSeq:NP_001163304.1
RefSeq:NP_728505.1 RefSeq:NP_728507.1 RefSeq:NP_995946.1
UniGene:Dm.1449 HSSP:Q80TJ7 ProteinModelPortal:Q9W0T1 SMR:Q9W0T1
IntAct:Q9W0T1 MINT:MINT-1583525 STRING:Q9W0T1 PaxDb:Q9W0T1
EnsemblMetazoa:FBtr0072521 EnsemblMetazoa:FBtr0301348
EnsemblMetazoa:FBtr0332104 GeneID:44811 KEGG:dme:Dmel_CG32346
CTD:44811 FlyBase:FBgn0000541 InParanoid:Q9W0T1 OrthoDB:EOG466T1P
PhylomeDB:Q9W0T1 ChiTaRS:E(bx) GenomeRNAi:44811 NextBio:837653
Bgee:Q9W0T1 GermOnline:CG32346 Uniprot:Q9W0T1
Length = 2669
Score = 977 (349.0 bits), Expect = 2.0e-108, Sum P(2) = 2.0e-108
Identities = 172/269 (63%), Positives = 211/269 (78%)
Query: 154 SPEPLWLQTERQIQPLELPRSSDDLLIPREYVMQTLSIYEVLRHFKSLIRLSPFRFEDFC 213
SPEP+WLQ RQ L+LP SS+DL I +V++ LSIYEVLR F+ ++RLSPFRFED C
Sbjct: 160 SPEPVWLQEGRQYAALDLPDSSEDLFIANTHVLRALSIYEVLRRFRHMVRLSPFRFEDLC 219
Query: 214 AVLNFEEQSNLLVEIHVSLLKTIFREEDTQQTHFGPLDQKDSANSVLYFIDAMTWPEALR 273
A L EEQS LL E+H+ LLK I REED Q THFGPLDQKD+ N LY ID++TWPE LR
Sbjct: 220 AALACEEQSALLTEVHIMLLKAILREEDAQGTHFGPLDQKDTVNISLYLIDSITWPEVLR 279
Query: 274 SYIESDKTFDEEVLNILNTCEYPFTNIEKRLRVLQFLTDQILITSPVREDLIHEGGFQYD 333
SY+ESDKTFD V +IL+ EYP+T I+ RL VLQFL+DQ L ++ +R+ ++ EG YD
Sbjct: 280 SYVESDKTFDRNVFHILSHTEYPYTGIDNRLEVLQFLSDQFLTSNSIRDVMLQEGPIHYD 339
Query: 334 DHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHKVTGVTDCLPDVE 393
DHCRVCHR+G+LLCCETCPAV+HLECVDPP+ DVP EDWQC LC++HKV+GV DC+ E
Sbjct: 340 DHCRVCHRLGDLLCCETCPAVYHLECVDPPMNDVPTEDWQCGLCRSHKVSGVVDCVLPQE 399
Query: 394 KSGLLCRQEHLGFDRAGRKYWFLSRRIFM 422
K G+L R + LG DR GRKYWF++RRIF+
Sbjct: 400 KQGVLIRHDSLGVDRHGRKYWFIARRIFI 428
Score = 145 (56.1 bits), Expect = 2.0e-108, Sum P(2) = 2.0e-108
Identities = 45/111 (40%), Positives = 58/111 (52%)
Query: 1 MYGR-IKRRGRPPKTPNTERP--KFQVHLLKKPQYLQNLEARGLNSPITSRTSSPQGSET 57
M GR ++RGRPPKTPN ER +F LLKKP+YL +++ ++P SR SPQ E
Sbjct: 1 MSGRGSRKRGRPPKTPN-ERASGRFNYQLLKKPKYLSEGKSQP-STPSASRGISPQSDEG 58
Query: 58 SRRS-----------TAKKGTKRKSNPPTXXXXXXNQKRKQTLETDYHYGS 97
SR S AK+G RKS +K E++YHYGS
Sbjct: 59 SRSSHNNHTNRSRGSAAKRGRGRKSAVQPNTSSYSGRKG---YESEYHYGS 106
Score = 47 (21.6 bits), Expect = 8.9e-06, Sum P(2) = 8.9e-06
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 346 LCCETCPAVFHLECV 360
+CC+ C FH CV
Sbjct: 2511 ICCDKCQDWFHGRCV 2525
Score = 38 (18.4 bits), Expect = 4.0e-97, Sum P(2) = 4.0e-97
Identities = 6/10 (60%), Positives = 8/10 (80%)
Query: 9 GRPPKTPNTE 18
GRPP+ P+ E
Sbjct: 153 GRPPRPPSPE 162
Score = 38 (18.4 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 6/13 (46%), Positives = 8/13 (61%)
Query: 348 CETCPAVFHLECV 360
C+ C FH +CV
Sbjct: 2457 CDLCSNWFHGDCV 2469
>UNIPROTKB|F5GXF5 [details] [associations]
symbol:BPTF "Nucleosome-remodeling factor subunit BPTF"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 SMART:SM00249 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR004022 InterPro:IPR018500
InterPro:IPR018501 Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
EMBL:AC006534 EMBL:AC107377 EMBL:AC134407 HGNC:HGNC:3581
ChiTaRS:BPTF IPI:IPI00911006 Ensembl:ENST00000544778
UCSC:uc010wqm.1 ArrayExpress:F5GXF5 Uniprot:F5GXF5
Length = 2457
Score = 861 (308.1 bits), Expect = 3.2e-87, Sum P(3) = 3.2e-87
Identities = 150/260 (57%), Positives = 197/260 (75%)
Query: 163 ERQIQPLELPRSSDDLLIPREYVMQTLSIYEVLRHFKSLIRLSPFRFEDFCAVLNFEEQS 222
E+ I PLE P+SS+DL++P E++M ++IYEVLR+F +++RLSPFRFEDFCA L +EQ
Sbjct: 221 EKDIPPLEFPKSSEDLMVPNEHIMNVIAIYEVLRNFGTVLRLSPFRFEDFCAALVSQEQC 280
Query: 223 NLLVEIHVSLLKTIFREEDTQQTHFGPLDQKDSANSVLYFIDAMTWPEALRSYIESDKTF 282
L+ E+HV LLK + REEDT T FGP D KDS NS LYFID MTWPE LR Y ESDK +
Sbjct: 281 TLMAEMHVVLLKAVLREEDTSNTTFGPADLKDSVNSTLYFIDGMTWPEVLRVYCESDKEY 340
Query: 283 DEEVLNILNTCEYPFTNIEKRLRVLQFLTDQILITSPVREDLIHEGGFQYDDHCRVCHRV 342
VL +YP+ +E +++VLQFL DQ L T+ RE+L+ EG QYDDHCRVCH++
Sbjct: 341 -HHVLPYQEAEDYPYGPVENKIKVLQFLVDQFLTTNIAREELMSEGVIQYDDHCRVCHKL 399
Query: 343 GELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHKVTGVTDCLPDVEKSGLLCRQE 402
G+LLCCETC AV+HLECV PPL +VP+++WQC +C AHKV GVTDC+ +++K+ R E
Sbjct: 400 GDLLCCETCSAVYHLECVKPPLEEVPEDEWQCEVCVAHKVPGVTDCVAEIQKNKPYIRHE 459
Query: 403 HLGFDRAGRKYWFLSRRIFM 422
+G+DR+ RKYWFL+RR+ +
Sbjct: 460 PIGYDRSRRKYWFLNRRLII 479
Score = 46 (21.3 bits), Expect = 3.2e-87, Sum P(3) = 3.2e-87
Identities = 8/9 (88%), Positives = 8/9 (88%)
Query: 7 RRGRPPKTP 15
RRGRPPK P
Sbjct: 4 RRGRPPKQP 12
Score = 42 (19.8 bits), Expect = 3.2e-87, Sum P(3) = 3.2e-87
Identities = 8/14 (57%), Positives = 11/14 (78%)
Query: 47 SRTSSPQGSETSRR 60
+R SSP+G +SRR
Sbjct: 62 TRLSSPRGGSSSRR 75
>UNIPROTKB|Q12830 [details] [associations]
symbol:BPTF "Nucleosome-remodeling factor subunit BPTF"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0001892 "embryonic placenta development"
evidence=IEA] [GO:0007492 "endoderm development" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016589
"NURF complex" evidence=IDA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0008134 "transcription factor binding" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IDA] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007420 "brain development" evidence=IMP] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0006351 "transcription, DNA-dependent" evidence=IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=IMP;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00249 SMART:SM00297 GO:GO:0005737
GO:GO:0045893 GO:GO:0007420 GO:GO:0009952 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0006351 GO:GO:0006338
GO:GO:0000122 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0008134 GO:GO:0007492 GO:GO:0001892
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 eggNOG:COG5076
InterPro:IPR018359 GO:GO:0016589 InterPro:IPR004022
InterPro:IPR018500 InterPro:IPR018501 Pfam:PF02791 SMART:SM00571
PROSITE:PS50827 EMBL:AB032251 EMBL:AC006534 EMBL:AC107377
EMBL:AC134407 EMBL:U05237 EMBL:AY282495 EMBL:BC067234
IPI:IPI00254408 IPI:IPI00376404 IPI:IPI00785110 PIR:G01252
RefSeq:NP_004450.3 RefSeq:NP_872579.2 UniGene:Hs.444200 PDB:2F6J
PDB:2F6N PDB:2FSA PDB:2FUI PDB:2FUU PDB:2RI7 PDB:3QZS PDB:3QZT
PDB:3QZV PDB:3UV2 PDBsum:2F6J PDBsum:2F6N PDBsum:2FSA PDBsum:2FUI
PDBsum:2FUU PDBsum:2RI7 PDBsum:3QZS PDBsum:3QZT PDBsum:3QZV
PDBsum:3UV2 ProteinModelPortal:Q12830 SMR:Q12830 IntAct:Q12830
STRING:Q12830 PhosphoSite:Q12830 DMDM:215274183 PaxDb:Q12830
PRIDE:Q12830 Ensembl:ENST00000306378 Ensembl:ENST00000321892
Ensembl:ENST00000335221 Ensembl:ENST00000571054
Ensembl:ENST00000573834 Ensembl:ENST00000576412 GeneID:2186
KEGG:hsa:2186 UCSC:uc002jge.3 UCSC:uc002jgf.3 CTD:2186
GeneCards:GC17P065821 HGNC:HGNC:3581 HPA:HPA029069 MIM:601819
neXtProt:NX_Q12830 PharmGKB:PA162377557 HOGENOM:HOG000231041
HOVERGEN:HBG080062 KO:K11728 OMA:DVIMEDF ChiTaRS:BPTF
EvolutionaryTrace:Q12830 GenomeRNAi:2186 NextBio:8831
ArrayExpress:Q12830 Bgee:Q12830 CleanEx:HS_BPTF
Genevestigator:Q12830 GermOnline:ENSG00000171634 Uniprot:Q12830
Length = 3046
Score = 861 (308.1 bits), Expect = 9.8e-87, Sum P(3) = 9.8e-87
Identities = 150/260 (57%), Positives = 197/260 (75%)
Query: 163 ERQIQPLELPRSSDDLLIPREYVMQTLSIYEVLRHFKSLIRLSPFRFEDFCAVLNFEEQS 222
E+ I PLE P+SS+DL++P E++M ++IYEVLR+F +++RLSPFRFEDFCA L +EQ
Sbjct: 221 EKDIPPLEFPKSSEDLMVPNEHIMNVIAIYEVLRNFGTVLRLSPFRFEDFCAALVSQEQC 280
Query: 223 NLLVEIHVSLLKTIFREEDTQQTHFGPLDQKDSANSVLYFIDAMTWPEALRSYIESDKTF 282
L+ E+HV LLK + REEDT T FGP D KDS NS LYFID MTWPE LR Y ESDK +
Sbjct: 281 TLMAEMHVVLLKAVLREEDTSNTTFGPADLKDSVNSTLYFIDGMTWPEVLRVYCESDKEY 340
Query: 283 DEEVLNILNTCEYPFTNIEKRLRVLQFLTDQILITSPVREDLIHEGGFQYDDHCRVCHRV 342
VL +YP+ +E +++VLQFL DQ L T+ RE+L+ EG QYDDHCRVCH++
Sbjct: 341 -HHVLPYQEAEDYPYGPVENKIKVLQFLVDQFLTTNIAREELMSEGVIQYDDHCRVCHKL 399
Query: 343 GELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHKVTGVTDCLPDVEKSGLLCRQE 402
G+LLCCETC AV+HLECV PPL +VP+++WQC +C AHKV GVTDC+ +++K+ R E
Sbjct: 400 GDLLCCETCSAVYHLECVKPPLEEVPEDEWQCEVCVAHKVPGVTDCVAEIQKNKPYIRHE 459
Query: 403 HLGFDRAGRKYWFLSRRIFM 422
+G+DR+ RKYWFL+RR+ +
Sbjct: 460 PIGYDRSRRKYWFLNRRLII 479
Score = 46 (21.3 bits), Expect = 9.8e-87, Sum P(3) = 9.8e-87
Identities = 8/9 (88%), Positives = 8/9 (88%)
Query: 7 RRGRPPKTP 15
RRGRPPK P
Sbjct: 4 RRGRPPKQP 12
Score = 42 (19.8 bits), Expect = 9.8e-87, Sum P(3) = 9.8e-87
Identities = 8/14 (57%), Positives = 11/14 (78%)
Query: 47 SRTSSPQGSETSRR 60
+R SSP+G +SRR
Sbjct: 62 TRLSSPRGGSSSRR 75
>UNIPROTKB|F1LWS6 [details] [associations]
symbol:F1LWS6 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR004022
InterPro:IPR018500 InterPro:IPR018501 Pfam:PF02791 SMART:SM00571
PROSITE:PS50827 IPI:IPI00209838 Ensembl:ENSRNOT00000020980
ArrayExpress:F1LWS6 Uniprot:F1LWS6
Length = 822
Score = 854 (305.7 bits), Expect = 2.4e-85, P = 2.4e-85
Identities = 149/260 (57%), Positives = 197/260 (75%)
Query: 163 ERQIQPLELPRSSDDLLIPREYVMQTLSIYEVLRHFKSLIRLSPFRFEDFCAVLNFEEQS 222
E+ I PLE P+SS+DL++P E++M ++IYEV+R+F +++RLSPF FEDFCA L +EQ
Sbjct: 112 EKDIPPLEFPKSSEDLMVPNEHIMNVIAIYEVVRNFGNVLRLSPFCFEDFCAALVSQEQC 171
Query: 223 NLLVEIHVSLLKTIFREEDTQQTHFGPLDQKDSANSVLYFIDAMTWPEALRSYIESDKTF 282
L+ E+HV+LLK + REEDT T FGP D KDS NS LYFID MTWPE LR Y ESDK +
Sbjct: 172 TLMAEMHVALLKAVLREEDTSNTTFGPADLKDSVNSTLYFIDGMTWPEVLRVYCESDKEY 231
Query: 283 DEEVLNILNTCEYPFTNIEKRLRVLQFLTDQILITSPVREDLIHEGGFQYDDHCRVCHRV 342
VL +YP+ +E +++VLQFL DQ L T+ RE+L+ EG QYDDHCRVCH++
Sbjct: 232 -HHVLPYQEAEDYPYGPVESKIKVLQFLVDQFLTTNIAREELMSEGVIQYDDHCRVCHKL 290
Query: 343 GELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHKVTGVTDCLPDVEKSGLLCRQE 402
G+LLCCETC AV+HLECV PPL +VP+++WQC +C AHKV GVTDC+ +V+K+ R E
Sbjct: 291 GDLLCCETCSAVYHLECVKPPLEEVPEDEWQCEVCVAHKVPGVTDCVAEVQKNKPYVRHE 350
Query: 403 HLGFDRAGRKYWFLSRRIFM 422
+G+DR+ RKYWFL+RR+ +
Sbjct: 351 PIGYDRSRRKYWFLNRRLII 370
>UNIPROTKB|E1C5C7 [details] [associations]
symbol:BPTF "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00249 SMART:SM00297 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR004022 InterPro:IPR018500
InterPro:IPR018501 Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
GeneTree:ENSGT00660000095339 EMBL:AADN02030018 EMBL:AADN02030019
EMBL:AADN02030020 IPI:IPI00594126 Ensembl:ENSGALT00000005744
ArrayExpress:E1C5C7 Uniprot:E1C5C7
Length = 2789
Score = 863 (308.9 bits), Expect = 1.3e-84, P = 1.3e-84
Identities = 151/260 (58%), Positives = 197/260 (75%)
Query: 163 ERQIQPLELPRSSDDLLIPREYVMQTLSIYEVLRHFKSLIRLSPFRFEDFCAVLNFEEQS 222
E+ I PLE P+SS+DL++P E++M ++IYEVLR+F +++RLSPFRFEDFCA L +EQ
Sbjct: 81 EKDIPPLEFPKSSEDLMVPSEHIMNVIAIYEVLRNFGTVLRLSPFRFEDFCAALVSQEQC 140
Query: 223 NLLVEIHVSLLKTIFREEDTQQTHFGPLDQKDSANSVLYFIDAMTWPEALRSYIESDKTF 282
L+ E+H+ LLK + REEDT T FGP D KDS NS LYFID MTWPE LR Y ESDK +
Sbjct: 141 TLMAEMHIVLLKAVLREEDTSNTTFGPADLKDSVNSTLYFIDGMTWPEVLRVYCESDKEY 200
Query: 283 DEEVLNILNTCEYPFTNIEKRLRVLQFLTDQILITSPVREDLIHEGGFQYDDHCRVCHRV 342
VL T +YP+ +E +++VLQFL DQ L T+ RE+L+ EG QYDDHCRVCH++
Sbjct: 201 -HHVLPYQETEDYPYGPVENKIKVLQFLVDQFLTTNIAREELMSEGVIQYDDHCRVCHKL 259
Query: 343 GELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHKVTGVTDCLPDVEKSGLLCRQE 402
G+LLCCETC AV+HLECV PPL +VP+++WQC +C AHKV GVTDC+ +++K+ R E
Sbjct: 260 GDLLCCETCSAVYHLECVKPPLEEVPEDEWQCEVCVAHKVPGVTDCVAEIQKNKPYIRHE 319
Query: 403 HLGFDRAGRKYWFLSRRIFM 422
+G+DR RKYWFL+RRI +
Sbjct: 320 PIGYDRHRRKYWFLNRRIII 339
>UNIPROTKB|E1C5C8 [details] [associations]
symbol:BPTF "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0001892 "embryonic placenta
development" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007420 "brain development" evidence=IEA]
[GO:0007492 "endoderm development" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0016589 "NURF complex" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00249 SMART:SM00297 GO:GO:0045893
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0006351
GO:GO:0006338 GO:GO:0000122 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0016589 InterPro:IPR004022
InterPro:IPR018500 InterPro:IPR018501 Pfam:PF02791 SMART:SM00571
PROSITE:PS50827 OMA:DVIMEDF GO:GO:0008094
GeneTree:ENSGT00660000095339 EMBL:AADN02030018 EMBL:AADN02030019
EMBL:AADN02030020 IPI:IPI00601232 Ensembl:ENSGALT00000005741
ArrayExpress:E1C5C8 Uniprot:E1C5C8
Length = 2802
Score = 863 (308.9 bits), Expect = 1.3e-84, P = 1.3e-84
Identities = 151/260 (58%), Positives = 197/260 (75%)
Query: 163 ERQIQPLELPRSSDDLLIPREYVMQTLSIYEVLRHFKSLIRLSPFRFEDFCAVLNFEEQS 222
E+ I PLE P+SS+DL++P E++M ++IYEVLR+F +++RLSPFRFEDFCA L +EQ
Sbjct: 81 EKDIPPLEFPKSSEDLMVPSEHIMNVIAIYEVLRNFGTVLRLSPFRFEDFCAALVSQEQC 140
Query: 223 NLLVEIHVSLLKTIFREEDTQQTHFGPLDQKDSANSVLYFIDAMTWPEALRSYIESDKTF 282
L+ E+H+ LLK + REEDT T FGP D KDS NS LYFID MTWPE LR Y ESDK +
Sbjct: 141 TLMAEMHIVLLKAVLREEDTSNTTFGPADLKDSVNSTLYFIDGMTWPEVLRVYCESDKEY 200
Query: 283 DEEVLNILNTCEYPFTNIEKRLRVLQFLTDQILITSPVREDLIHEGGFQYDDHCRVCHRV 342
VL T +YP+ +E +++VLQFL DQ L T+ RE+L+ EG QYDDHCRVCH++
Sbjct: 201 -HHVLPYQETEDYPYGPVENKIKVLQFLVDQFLTTNIAREELMSEGVIQYDDHCRVCHKL 259
Query: 343 GELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHKVTGVTDCLPDVEKSGLLCRQE 402
G+LLCCETC AV+HLECV PPL +VP+++WQC +C AHKV GVTDC+ +++K+ R E
Sbjct: 260 GDLLCCETCSAVYHLECVKPPLEEVPEDEWQCEVCVAHKVPGVTDCVAEIQKNKPYIRHE 319
Query: 403 HLGFDRAGRKYWFLSRRIFM 422
+G+DR RKYWFL+RRI +
Sbjct: 320 PIGYDRHRRKYWFLNRRIII 339
>UNIPROTKB|F1PFZ4 [details] [associations]
symbol:BPTF "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00249 SMART:SM00297 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR004022 InterPro:IPR018500
InterPro:IPR018501 Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
GeneTree:ENSGT00660000095339 EMBL:AAEX03006365 EMBL:AAEX03006366
Ensembl:ENSCAFT00000018361 Uniprot:F1PFZ4
Length = 2716
Score = 862 (308.5 bits), Expect = 1.5e-84, P = 1.5e-84
Identities = 155/279 (55%), Positives = 204/279 (73%)
Query: 148 SYISRMSPE---PLW-LQTERQIQPLELPRSSDDLLIPREYVMQTLSIYEVLRHFKSLIR 203
S+I R P P + E+ I PLE P+SS+DL++P E++M ++IYEVLR+F +++R
Sbjct: 2 SFIGRRKPRVHRPRSPILEEKDIPPLEFPKSSEDLMVPNEHIMNVIAIYEVLRNFGTVLR 61
Query: 204 LSPFRFEDFCAVLNFEEQSNLLVEIHVSLLKTIFREEDTQQTHFGPLDQKDSANSVLYFI 263
LSPFRFEDFCA L +EQ L+ E+HV LLK + REEDT T FGP D KDS NS LYFI
Sbjct: 62 LSPFRFEDFCAALVSQEQCTLMAEMHVVLLKAVLREEDTSNTTFGPADLKDSVNSTLYFI 121
Query: 264 DAMTWPEALRSYIESDKTFDEEVLNILNTCEYPFTNIEKRLRVLQFLTDQILITSPVRED 323
D MTWPE LR Y ESDK + VL +YP+ +E +++VLQFL DQ L T+ RE+
Sbjct: 122 DGMTWPEVLRVYCESDKEY-HHVLPYQEAEDYPYGPVENKIKVLQFLVDQFLTTNIAREE 180
Query: 324 LIHEGGFQYDDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHKVT 383
L+ EG QYDDHCRVCH++G+LLCCETC AV+HLECV PPL +VP+++WQC +C AHKV
Sbjct: 181 LMSEGVIQYDDHCRVCHKLGDLLCCETCSAVYHLECVKPPLEEVPEDEWQCEVCVAHKVP 240
Query: 384 GVTDCLPDVEKSGLLCRQEHLGFDRAGRKYWFLSRRIFM 422
GVTDC+ +++K+ R E +G+DR+ RKYWFL+RR+ +
Sbjct: 241 GVTDCVAEIQKNKPYIRHEPIGYDRSRRKYWFLNRRLII 279
>UNIPROTKB|J9JHE8 [details] [associations]
symbol:BPTF "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00249 SMART:SM00297 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR004022 InterPro:IPR018500
InterPro:IPR018501 Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
OMA:DVIMEDF GeneTree:ENSGT00660000095339 EMBL:AAEX03006365
EMBL:AAEX03006366 Ensembl:ENSCAFT00000047847 Uniprot:J9JHE8
Length = 2842
Score = 862 (308.5 bits), Expect = 1.7e-84, P = 1.7e-84
Identities = 155/279 (55%), Positives = 204/279 (73%)
Query: 148 SYISRMSPE---PLW-LQTERQIQPLELPRSSDDLLIPREYVMQTLSIYEVLRHFKSLIR 203
S+I R P P + E+ I PLE P+SS+DL++P E++M ++IYEVLR+F +++R
Sbjct: 2 SFIGRRKPRVHRPRSPILEEKDIPPLEFPKSSEDLMVPNEHIMNVIAIYEVLRNFGTVLR 61
Query: 204 LSPFRFEDFCAVLNFEEQSNLLVEIHVSLLKTIFREEDTQQTHFGPLDQKDSANSVLYFI 263
LSPFRFEDFCA L +EQ L+ E+HV LLK + REEDT T FGP D KDS NS LYFI
Sbjct: 62 LSPFRFEDFCAALVSQEQCTLMAEMHVVLLKAVLREEDTSNTTFGPADLKDSVNSTLYFI 121
Query: 264 DAMTWPEALRSYIESDKTFDEEVLNILNTCEYPFTNIEKRLRVLQFLTDQILITSPVRED 323
D MTWPE LR Y ESDK + VL +YP+ +E +++VLQFL DQ L T+ RE+
Sbjct: 122 DGMTWPEVLRVYCESDKEY-HHVLPYQEAEDYPYGPVENKIKVLQFLVDQFLTTNIAREE 180
Query: 324 LIHEGGFQYDDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHKVT 383
L+ EG QYDDHCRVCH++G+LLCCETC AV+HLECV PPL +VP+++WQC +C AHKV
Sbjct: 181 LMSEGVIQYDDHCRVCHKLGDLLCCETCSAVYHLECVKPPLEEVPEDEWQCEVCVAHKVP 240
Query: 384 GVTDCLPDVEKSGLLCRQEHLGFDRAGRKYWFLSRRIFM 422
GVTDC+ +++K+ R E +G+DR+ RKYWFL+RR+ +
Sbjct: 241 GVTDCVAEIQKNKPYIRHEPIGYDRSRRKYWFLNRRLII 279
>UNIPROTKB|E7ETD6 [details] [associations]
symbol:BPTF "Nucleosome-remodeling factor subunit BPTF"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 SMART:SM00249 SMART:SM00297
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR004022 InterPro:IPR018500
InterPro:IPR018501 Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
EMBL:AC006534 EMBL:AC107377 EMBL:AC134407 HGNC:HGNC:3581
ChiTaRS:BPTF IPI:IPI00024532 ProteinModelPortal:E7ETD6
Ensembl:ENST00000424123 ArrayExpress:E7ETD6 Uniprot:E7ETD6
Length = 2764
Score = 861 (308.1 bits), Expect = 2.0e-84, P = 2.0e-84
Identities = 150/260 (57%), Positives = 197/260 (75%)
Query: 163 ERQIQPLELPRSSDDLLIPREYVMQTLSIYEVLRHFKSLIRLSPFRFEDFCAVLNFEEQS 222
E+ I PLE P+SS+DL++P E++M ++IYEVLR+F +++RLSPFRFEDFCA L +EQ
Sbjct: 82 EKDIPPLEFPKSSEDLMVPNEHIMNVIAIYEVLRNFGTVLRLSPFRFEDFCAALVSQEQC 141
Query: 223 NLLVEIHVSLLKTIFREEDTQQTHFGPLDQKDSANSVLYFIDAMTWPEALRSYIESDKTF 282
L+ E+HV LLK + REEDT T FGP D KDS NS LYFID MTWPE LR Y ESDK +
Sbjct: 142 TLMAEMHVVLLKAVLREEDTSNTTFGPADLKDSVNSTLYFIDGMTWPEVLRVYCESDKEY 201
Query: 283 DEEVLNILNTCEYPFTNIEKRLRVLQFLTDQILITSPVREDLIHEGGFQYDDHCRVCHRV 342
VL +YP+ +E +++VLQFL DQ L T+ RE+L+ EG QYDDHCRVCH++
Sbjct: 202 -HHVLPYQEAEDYPYGPVENKIKVLQFLVDQFLTTNIAREELMSEGVIQYDDHCRVCHKL 260
Query: 343 GELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHKVTGVTDCLPDVEKSGLLCRQE 402
G+LLCCETC AV+HLECV PPL +VP+++WQC +C AHKV GVTDC+ +++K+ R E
Sbjct: 261 GDLLCCETCSAVYHLECVKPPLEEVPEDEWQCEVCVAHKVPGVTDCVAEIQKNKPYIRHE 320
Query: 403 HLGFDRAGRKYWFLSRRIFM 422
+G+DR+ RKYWFL+RR+ +
Sbjct: 321 PIGYDRSRRKYWFLNRRLII 340
>UNIPROTKB|F1N3U7 [details] [associations]
symbol:BPTF "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0007492 "endoderm development" evidence=IEA]
[GO:0007420 "brain development" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006338 "chromatin
remodeling" evidence=IEA] [GO:0001892 "embryonic placenta
development" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016 SMART:SM00249
SMART:SM00297 GO:GO:0045893 GO:GO:0007420 GO:GO:0009952
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0006351
GO:GO:0006338 GO:GO:0000122 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0007492 GO:GO:0001892 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0016589
InterPro:IPR004022 InterPro:IPR018500 InterPro:IPR018501
Pfam:PF02791 SMART:SM00571 PROSITE:PS50827 OMA:DVIMEDF
GO:GO:0008094 GeneTree:ENSGT00660000095339 EMBL:DAAA02049354
IPI:IPI00698701 Ensembl:ENSBTAT00000019440 Uniprot:F1N3U7
Length = 2853
Score = 861 (308.1 bits), Expect = 2.2e-84, P = 2.2e-84
Identities = 150/260 (57%), Positives = 197/260 (75%)
Query: 163 ERQIQPLELPRSSDDLLIPREYVMQTLSIYEVLRHFKSLIRLSPFRFEDFCAVLNFEEQS 222
E+ I PLE P+SS+DL++P E++M ++IYEVLR+F +++RLSPFRFEDFCA L +EQ
Sbjct: 23 EKDIPPLEFPKSSEDLMVPNEHIMNVIAIYEVLRNFGTVLRLSPFRFEDFCAALVSQEQC 82
Query: 223 NLLVEIHVSLLKTIFREEDTQQTHFGPLDQKDSANSVLYFIDAMTWPEALRSYIESDKTF 282
L+ E+HV LLK + REEDT T FGP D KDS NS LYFID MTWPE LR Y ESDK +
Sbjct: 83 TLMAEMHVVLLKAVLREEDTSNTTFGPADLKDSVNSTLYFIDGMTWPEVLRVYCESDKEY 142
Query: 283 DEEVLNILNTCEYPFTNIEKRLRVLQFLTDQILITSPVREDLIHEGGFQYDDHCRVCHRV 342
VL +YP+ +E +++VLQFL DQ L T+ RE+L+ EG QYDDHCRVCH++
Sbjct: 143 -HHVLPYQEAEDYPYGPVENKIKVLQFLVDQFLTTNIAREELMSEGVIQYDDHCRVCHKL 201
Query: 343 GELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHKVTGVTDCLPDVEKSGLLCRQE 402
G+LLCCETC AV+HLECV PPL +VP+++WQC +C AHKV GVTDC+ +++K+ R E
Sbjct: 202 GDLLCCETCSAVYHLECVKPPLEEVPEDEWQCEVCVAHKVPGVTDCVAEIQKNKPYIRHE 261
Query: 403 HLGFDRAGRKYWFLSRRIFM 422
+G+DR+ RKYWFL+RR+ +
Sbjct: 262 PIGYDRSRRKYWFLNRRLII 281
>UNIPROTKB|F1LX76 [details] [associations]
symbol:F1LX76 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00249 SMART:SM00297 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR004022 InterPro:IPR018500
InterPro:IPR018501 Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
IPI:IPI00361297 Ensembl:ENSRNOT00000020904 ArrayExpress:F1LX76
Uniprot:F1LX76
Length = 2894
Score = 854 (305.7 bits), Expect = 1.2e-83, P = 1.2e-83
Identities = 149/260 (57%), Positives = 197/260 (75%)
Query: 163 ERQIQPLELPRSSDDLLIPREYVMQTLSIYEVLRHFKSLIRLSPFRFEDFCAVLNFEEQS 222
E+ I PLE P+SS+DL++P E++M ++IYEV+R+F +++RLSPF FEDFCA L +EQ
Sbjct: 199 EKDIPPLEFPKSSEDLMVPNEHIMNVIAIYEVVRNFGNVLRLSPFCFEDFCAALVSQEQC 258
Query: 223 NLLVEIHVSLLKTIFREEDTQQTHFGPLDQKDSANSVLYFIDAMTWPEALRSYIESDKTF 282
L+ E+HV+LLK + REEDT T FGP D KDS NS LYFID MTWPE LR Y ESDK +
Sbjct: 259 TLMAEMHVALLKAVLREEDTSNTTFGPADLKDSVNSTLYFIDGMTWPEVLRVYCESDKEY 318
Query: 283 DEEVLNILNTCEYPFTNIEKRLRVLQFLTDQILITSPVREDLIHEGGFQYDDHCRVCHRV 342
VL +YP+ +E +++VLQFL DQ L T+ RE+L+ EG QYDDHCRVCH++
Sbjct: 319 -HHVLPYQEAEDYPYGPVESKIKVLQFLVDQFLTTNIAREELMSEGVIQYDDHCRVCHKL 377
Query: 343 GELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHKVTGVTDCLPDVEKSGLLCRQE 402
G+LLCCETC AV+HLECV PPL +VP+++WQC +C AHKV GVTDC+ +V+K+ R E
Sbjct: 378 GDLLCCETCSAVYHLECVKPPLEEVPEDEWQCEVCVAHKVPGVTDCVAEVQKNKPYVRHE 437
Query: 403 HLGFDRAGRKYWFLSRRIFM 422
+G+DR+ RKYWFL+RR+ +
Sbjct: 438 PIGYDRSRRKYWFLNRRLII 457
>UNIPROTKB|F1M1V5 [details] [associations]
symbol:F1M1V5 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00249 SMART:SM00297 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR004022 InterPro:IPR018500
InterPro:IPR018501 Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
IPI:IPI00782357 Ensembl:ENSRNOT00000055099 ArrayExpress:F1M1V5
Uniprot:F1M1V5
Length = 2952
Score = 854 (305.7 bits), Expect = 1.3e-83, P = 1.3e-83
Identities = 149/260 (57%), Positives = 197/260 (75%)
Query: 163 ERQIQPLELPRSSDDLLIPREYVMQTLSIYEVLRHFKSLIRLSPFRFEDFCAVLNFEEQS 222
E+ I PLE P+SS+DL++P E++M ++IYEV+R+F +++RLSPF FEDFCA L +EQ
Sbjct: 199 EKDIPPLEFPKSSEDLMVPNEHIMNVIAIYEVVRNFGNVLRLSPFCFEDFCAALVSQEQC 258
Query: 223 NLLVEIHVSLLKTIFREEDTQQTHFGPLDQKDSANSVLYFIDAMTWPEALRSYIESDKTF 282
L+ E+HV+LLK + REEDT T FGP D KDS NS LYFID MTWPE LR Y ESDK +
Sbjct: 259 TLMAEMHVALLKAVLREEDTSNTTFGPADLKDSVNSTLYFIDGMTWPEVLRVYCESDKEY 318
Query: 283 DEEVLNILNTCEYPFTNIEKRLRVLQFLTDQILITSPVREDLIHEGGFQYDDHCRVCHRV 342
VL +YP+ +E +++VLQFL DQ L T+ RE+L+ EG QYDDHCRVCH++
Sbjct: 319 -HHVLPYQEAEDYPYGPVESKIKVLQFLVDQFLTTNIAREELMSEGVIQYDDHCRVCHKL 377
Query: 343 GELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHKVTGVTDCLPDVEKSGLLCRQE 402
G+LLCCETC AV+HLECV PPL +VP+++WQC +C AHKV GVTDC+ +V+K+ R E
Sbjct: 378 GDLLCCETCSAVYHLECVKPPLEEVPEDEWQCEVCVAHKVPGVTDCVAEVQKNKPYVRHE 437
Query: 403 HLGFDRAGRKYWFLSRRIFM 422
+G+DR+ RKYWFL+RR+ +
Sbjct: 438 PIGYDRSRRKYWFLNRRLII 457
>UNIPROTKB|F1M1V4 [details] [associations]
symbol:F1M1V4 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00249 SMART:SM00297 GO:GO:0045893
GO:GO:0007420 GO:GO:0009952 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0006351 GO:GO:0006338 GO:GO:0000122
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0007492
GO:GO:0001892 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0016589 InterPro:IPR004022
InterPro:IPR018500 InterPro:IPR018501 Pfam:PF02791 SMART:SM00571
PROSITE:PS50827 GO:GO:0008094 IPI:IPI00949885
Ensembl:ENSRNOT00000055100 ArrayExpress:F1M1V4 Uniprot:F1M1V4
Length = 3013
Score = 854 (305.7 bits), Expect = 1.3e-83, P = 1.3e-83
Identities = 149/260 (57%), Positives = 197/260 (75%)
Query: 163 ERQIQPLELPRSSDDLLIPREYVMQTLSIYEVLRHFKSLIRLSPFRFEDFCAVLNFEEQS 222
E+ I PLE P+SS+DL++P E++M ++IYEV+R+F +++RLSPF FEDFCA L +EQ
Sbjct: 199 EKDIPPLEFPKSSEDLMVPNEHIMNVIAIYEVVRNFGNVLRLSPFCFEDFCAALVSQEQC 258
Query: 223 NLLVEIHVSLLKTIFREEDTQQTHFGPLDQKDSANSVLYFIDAMTWPEALRSYIESDKTF 282
L+ E+HV+LLK + REEDT T FGP D KDS NS LYFID MTWPE LR Y ESDK +
Sbjct: 259 TLMAEMHVALLKAVLREEDTSNTTFGPADLKDSVNSTLYFIDGMTWPEVLRVYCESDKEY 318
Query: 283 DEEVLNILNTCEYPFTNIEKRLRVLQFLTDQILITSPVREDLIHEGGFQYDDHCRVCHRV 342
VL +YP+ +E +++VLQFL DQ L T+ RE+L+ EG QYDDHCRVCH++
Sbjct: 319 -HHVLPYQEAEDYPYGPVESKIKVLQFLVDQFLTTNIAREELMSEGVIQYDDHCRVCHKL 377
Query: 343 GELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHKVTGVTDCLPDVEKSGLLCRQE 402
G+LLCCETC AV+HLECV PPL +VP+++WQC +C AHKV GVTDC+ +V+K+ R E
Sbjct: 378 GDLLCCETCSAVYHLECVKPPLEEVPEDEWQCEVCVAHKVPGVTDCVAEVQKNKPYVRHE 437
Query: 403 HLGFDRAGRKYWFLSRRIFM 422
+G+DR+ RKYWFL+RR+ +
Sbjct: 438 PIGYDRSRRKYWFLNRRLII 457
>WB|WBGene00009180 [details] [associations]
symbol:nurf-1 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040027 "negative regulation of vulval
development" evidence=IMP] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR017956 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016 SMART:SM00249
SMART:SM00297 SMART:SM00384 GO:GO:0007275 GO:GO:0005634
GO:GO:0040010 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0000003 GO:GO:0006351 GO:GO:0016568
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 eggNOG:COG5076
InterPro:IPR004022 InterPro:IPR018500 InterPro:IPR018501
Pfam:PF02791 SMART:SM00571 PROSITE:PS50827 HSSP:Q8C9B9 EMBL:Z81515
PIR:T21430 PIR:T21432 PIR:T21433 PIR:T21435 RefSeq:NP_001022117.2
RefSeq:NP_001022118.2 RefSeq:NP_001022119.1 RefSeq:NP_001022120.1
RefSeq:NP_001022121.1 RefSeq:NP_001122607.1 RefSeq:NP_496994.3
RefSeq:NP_496995.3 DIP:DIP-25937N MINT:MINT-1051254 STRING:Q6BER5
PaxDb:Q6BER5 PRIDE:Q6BER5 GeneID:175098 KEGG:cel:CELE_F26H11.2
UCSC:F26H11.2a CTD:175098 WormBase:F26H11.2a WormBase:F26H11.2b
WormBase:F26H11.2c WormBase:F26H11.2d WormBase:F26H11.2e
WormBase:F26H11.2f WormBase:F26H11.2g WormBase:F26H11.2h
InParanoid:Q6BER5 OMA:RRIIRHK NextBio:886744 ArrayExpress:Q6BER5
Uniprot:Q6BER5
Length = 2194
Score = 466 (169.1 bits), Expect = 8.6e-44, Sum P(2) = 8.6e-44
Identities = 100/267 (37%), Positives = 155/267 (58%)
Query: 159 WLQTERQIQP-LELPRSSDDLLIPREYVMQTLSIYEVLRHFKSLIRLSPFRFEDFCAVLN 217
WL + P LELP SS D+ IP +M + IYE+LR + +R++PF FEDFCA L
Sbjct: 172 WLDEDPASLPKLELPESSQDIPIPTASIMDAVEIYEILRSYHRTLRITPFTFEDFCAALI 231
Query: 218 FEEQSNLLVEIHVSLLKTIFREEDTQQTHFGPLDQKDSANSVLYFIDAMTWPEALRSYIE 277
S ++ E+H++LL+ + +D +QTH+ + +S N +++ +D +T+ E LR YIE
Sbjct: 232 SHNNSCIMAEVHMALLRNCLKSDDEEQTHYSVTETNNSVNIMIHHMDTLTYAEILRQYIE 291
Query: 278 SDKTFDEEVLNILNTCEYPFTNIEKRLRVLQFLTDQILITSPVREDLIHEGGFQYDDHCR 337
+ D V + +N YPF + +L VL F++ + L +S ++ + + G FQ D++CR
Sbjct: 292 AYPFADASVRDAINVDNYPFVGYDAKLVVLLFMSYRFLYSSEFKKLVNNVGKFQNDENCR 351
Query: 338 VCHRV-GELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHK-VTGVTDCLPD--VE 393
VC + G ++ C C A FH+EC L+ P E CN+CK + V GV PD V+
Sbjct: 352 VCGKSSGRVVGCTQCEAAFHVECSH--LKPFP-EVLVCNICKKNSAVRGVLP--PDEAVD 406
Query: 394 KSGLLCRQEHLGFDRAGRKYWFLSRRI 420
+ L R + +G DR GR YWF+ RR+
Sbjct: 407 REPL--RSQPIGRDRYGRYYWFIVRRL 431
Score = 44 (20.5 bits), Expect = 8.6e-44, Sum P(2) = 8.6e-44
Identities = 9/16 (56%), Positives = 9/16 (56%)
Query: 6 KRRGRPPKTPNTERPK 21
K RGRP K P R K
Sbjct: 95 KARGRPKKNPTPPRRK 110
>TAIR|locus:2162509 [details] [associations]
symbol:AT5G22760 "AT5G22760" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0009630 "gravitropism" evidence=RCA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 Prosite:PS00018 EMBL:CP002688 GO:GO:0046872
GO:GO:0008270 InterPro:IPR018247 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR004022
InterPro:IPR018500 InterPro:IPR018501 Pfam:PF02791 SMART:SM00571
PROSITE:PS50827 IPI:IPI00532034 RefSeq:NP_197668.2 UniGene:At.43647
PRIDE:F4KBB1 EnsemblPlants:AT5G22760.1 GeneID:832339
KEGG:ath:AT5G22760 OMA:SHFPSIV Uniprot:F4KBB1
Length = 1566
Score = 173 (66.0 bits), Expect = 2.8e-16, Sum P(3) = 2.8e-16
Identities = 49/176 (27%), Positives = 82/176 (46%)
Query: 166 IQPLELPRSSDDLLIPREYVMQTLSIYEVLRHFKSLIRLSPFRFEDFCAVLNFEEQSNLL 225
+ P+ELP SS + IP E V+ LS+Y LR F + + PF +DF LNF ++LL
Sbjct: 170 VPPVELPSSSGTIGIPEEAVVYLLSVYGFLRSFSVQLYICPFGLDDFVGALNFLGPNSLL 229
Query: 226 VEIHVSLLKTIFREEDTQQTHFGPLDQKDSANSVLYFIDAMTWPEALRSYIESDKTFDEE 285
+HV+L++ + + + + K +DA+TWP L Y +
Sbjct: 230 DAVHVALMRALKGHLERLSSEGSEVASKCLRCIDWSLLDALTWPVYLVQYFAAMGHASGP 289
Query: 286 VLNILNTC----EYPFTNIEKRLRVLQFLTDQILITSPVREDLIH----EGGFQYD 333
+ N EY + + +L++LQ L D + + +R ++ + E GF D
Sbjct: 290 LWRFFNEFVVEKEYCSSPVVMKLKILQILCDDVFDVADLRAEIDNREESEVGFDTD 345
Score = 113 (44.8 bits), Expect = 2.8e-16, Sum P(3) = 2.8e-16
Identities = 18/49 (36%), Positives = 24/49 (48%)
Query: 334 DHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHKV 382
D CR+C G LLCC+ CP +H C+ +P W C C K+
Sbjct: 414 DECRLCGMDGTLLCCDGCPLAYHSRCIGVVKMYIPDGPWYCPECTIKKM 462
Score = 62 (26.9 bits), Expect = 4.3e-11, Sum P(3) = 4.3e-11
Identities = 16/56 (28%), Positives = 24/56 (42%)
Query: 330 FQYDDH--CRVCHRV--GELLCCETCPAVFHLECVDPPLRDVPQ---EDWQCNLCK 378
F Y++ C++C V G L C+TC H C P + W+C C+
Sbjct: 1510 FLYENTIPCQICKHVEPGPDLTCQTCNMTIHSHC--SPWEEESTCIGGSWRCGRCR 1563
Score = 48 (22.0 bits), Expect = 1.1e-09, Sum P(3) = 1.1e-09
Identities = 12/55 (21%), Positives = 26/55 (47%)
Query: 336 CRVCHRVG-ELLCCETCPAVFHLECVDPPLRDVPQE-DWQCNLCKAHKVTGVTDC 388
C++ + G + C +C +H+E V +P+ ++C C+ ++ DC
Sbjct: 1248 CKLPYNPGLTYIHCTSCDMWYHIEAVKLEESKIPEVVGFKC--CRCRRIRS-PDC 1299
Score = 47 (21.6 bits), Expect = 1.4e-09, Sum P(3) = 1.4e-09
Identities = 9/27 (33%), Positives = 12/27 (44%)
Query: 336 CRVCHR---VGELLCCETCPAVFHLEC 359
C CH + + + C TC H EC
Sbjct: 1085 CASCHLDVFLRDSITCSTCQGFCHKEC 1111
Score = 44 (20.5 bits), Expect = 2.8e-16, Sum P(3) = 2.8e-16
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 1 MYGRI-KRRGRPPKTPNTE 18
M G++ K RGRP K P E
Sbjct: 1 MEGKVAKPRGRPRKRPRPE 19
>UNIPROTKB|J3QQU3 [details] [associations]
symbol:PHF12 "PHD finger protein 12" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 EMBL:AC024267 HGNC:HGNC:20816
ChiTaRS:PHF12 ProteinModelPortal:J3QQU3 Ensembl:ENST00000583524
Uniprot:J3QQU3
Length = 129
Score = 142 (55.0 bits), Expect = 5.2e-11, Sum P(2) = 5.2e-11
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 334 DHCRVCHRVGELLCCETCPAVFHLECVDPPLRD--VPQEDWQCNLCKAHK 381
D C C G+LLCC+ CPA FHL+C +PPL + +P +W C+ C +
Sbjct: 57 DSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCTVRR 106
Score = 37 (18.1 bits), Expect = 5.2e-11, Sum P(2) = 5.2e-11
Identities = 10/36 (27%), Positives = 16/36 (44%)
Query: 40 GLNSPITSRTSSPQGSETSRRSTAKKGTKRKSNPPT 75
GL I + + P+ E +RS + R+S T
Sbjct: 19 GLMEQIQALLAPPKTDEAEKRSRKPEKEPRRSGRAT 54
>UNIPROTKB|B1AHC5 [details] [associations]
symbol:PHF21B "cDNA FLJ34161 fis, clone FCBBF3014229,
highly similar to PHD finger protein 21B" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 EMBL:CH471138
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 HOVERGEN:HBG080293 HOGENOM:HOG000231466
EMBL:AL049760 EMBL:Z83838 RefSeq:NP_001229379.1 UniGene:Hs.254097
DNASU:112885 GeneID:112885 KEGG:hsa:112885 CTD:112885
HGNC:HGNC:25161 ChiTaRS:PHF21B GenomeRNAi:112885 NextBio:78697
EMBL:AL079301 EMBL:AK091480 IPI:IPI00893566 SMR:B1AHC5
Ensembl:ENST00000403565 UCSC:uc003bfm.3 Uniprot:B1AHC5
Length = 327
Score = 157 (60.3 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 27/77 (35%), Positives = 41/77 (53%)
Query: 302 KRLRVLQFLTDQILITSPVREDLIHEGGFQYDDHCRVCHRVGELLCCETCPAVFHLECVD 361
KRL +L + + +T+ ED + +D+HC C R L C TCP +HL C++
Sbjct: 118 KRL-ASNYLNNPLFLTARANEDPCWKNEITHDEHCAACKRGANLQPCGTCPGAYHLSCLE 176
Query: 362 PPLRDVPQEDWQCNLCK 378
PPL+ P+ W C C+
Sbjct: 177 PPLKTAPKGVWVCPRCQ 193
Score = 55 (24.4 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 19/62 (30%), Positives = 31/62 (50%)
Query: 6 KRRGRPPKTPNTERPKFQVHL-LKKPQYLQNLEARGLNSPITSRTSSPQGS---ETSRRS 61
K+ RPP N E+ F V L L ++L+ ++++ S T++P S ET R+
Sbjct: 61 KKEDRPPTQENPEKIAFMVALGLVTTEHLEEIQSKRQERKRRS-TANPAYSGLLETERKR 119
Query: 62 TA 63
A
Sbjct: 120 LA 121
>UNIPROTKB|F1SJU8 [details] [associations]
symbol:PHF21B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 OMA:SDKQALG
GeneTree:ENSGT00530000063984 EMBL:CU633627
Ensembl:ENSSSCT00000000021 Uniprot:F1SJU8
Length = 450
Score = 162 (62.1 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 29/77 (37%), Positives = 40/77 (51%)
Query: 302 KRLRVLQFLTDQILITSPVREDLIHEGGFQYDDHCRVCHRVGELLCCETCPAVFHLECVD 361
KRL FL + +T+ ED + +D+HC C R L C TCP +HL C+D
Sbjct: 241 KRL-ASNFLNTPLFLTARANEDPCWKSEIAHDEHCATCKRGANLQPCGTCPGAYHLSCLD 299
Query: 362 PPLRDVPQEDWQCNLCK 378
PPL+ P+ W C C+
Sbjct: 300 PPLKTAPKGVWVCPKCQ 316
Score = 53 (23.7 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 19/62 (30%), Positives = 30/62 (48%)
Query: 6 KRRGRPPKTPNTERPKFQVHL-LKKPQYLQNLEARGLNSPITSRTSSPQGS---ETSRRS 61
K RPP N E+ F V L L ++L+ ++++ S T++P S ET R+
Sbjct: 184 KTEDRPPSQENPEKIAFMVALGLVTTEHLEEIQSKRQERKRRS-TANPAYSGLLETERKR 242
Query: 62 TA 63
A
Sbjct: 243 LA 244
Score = 41 (19.5 bits), Expect = 5.1e-09, Sum P(2) = 5.1e-09
Identities = 11/23 (47%), Positives = 13/23 (56%)
Query: 8 RGRPPKTPNTERPKFQVHLLKKP 30
R RPPK P T + K V +K P
Sbjct: 49 RDRPPKQPPTFQ-KATVVSIKNP 70
>POMBASE|SPAC2F7.07c [details] [associations]
symbol:cph2 "Clr6 histone deacetylase associated PHD
protein-2 Cph2" species:4896 "Schizosaccharomyces pombe"
[GO:0005634 "nucleus" evidence=IDA] [GO:0005819 "spindle"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016575 "histone
deacetylation" evidence=ISO] [GO:0019787 "small conjugating protein
ligase activity" evidence=ISM] [GO:0032221 "Rpd3S complex"
evidence=IDA] InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628
PROSITE:PS50016 SMART:SM00249 PomBase:SPAC2F7.07c EMBL:CU329670
GO:GO:0005819 GO:GO:0046872 GO:GO:0008270 GO:GO:0006338
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0019787
GO:GO:0016575 GO:GO:0032221 eggNOG:NOG145066 OrthoDB:EOG4TQQJV
PIR:T38555 RefSeq:NP_592978.1 ProteinModelPortal:Q09698
DIP:DIP-29347N STRING:Q09698 EnsemblFungi:SPAC2F7.07c.1
GeneID:2541422 KEGG:spo:SPAC2F7.07c NextBio:20802526 Uniprot:Q09698
Length = 607
Score = 175 (66.7 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 28/69 (40%), Positives = 42/69 (60%)
Query: 330 FQYD-DHCRVCHRVGELLCCETCPAVFHLECVDPPL--RDVPQEDWQCNLCKAHKVTGVT 386
++Y+ D+C CH G LCCETCP FH C+DPP+ +++P + W CN CK H +
Sbjct: 259 YRYNNDYCSACHGPGNFLCCETCPNSFHFTCIDPPIEEKNLPDDAWYCNECKHHSLYNEL 318
Query: 387 DCLPDVEKS 395
D ++E +
Sbjct: 319 DEQEELESN 327
>UNIPROTKB|Q5TH12 [details] [associations]
symbol:ZMYND8 "Protein kinase C-binding protein 1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00249 GO:GO:0046872 GO:GO:0008270
GO:GO:0016301 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370 EMBL:AL049540
EMBL:AL031666 UniGene:Hs.446240 UniGene:Hs.658553 UniGene:Hs.668465
HGNC:HGNC:9397 EMBL:AL390212 IPI:IPI00872983 SMR:Q5TH12
STRING:Q5TH12 Ensembl:ENST00000435836 HOVERGEN:HBG105145
Uniprot:Q5TH12
Length = 175
Score = 150 (57.9 bits), Expect = 5.0e-10, P = 5.0e-10
Identities = 29/74 (39%), Positives = 43/74 (58%)
Query: 333 DDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHKVTGVTDCLPDV 392
D +C VCHR G++LCCE CP V+H +C+ L P+ DW C C+ K+T V +C+
Sbjct: 63 DFYCWVCHREGQVLCCELCPRVYHAKCLR--LTSEPEGDWFCPECE--KIT-VAECIETQ 117
Query: 393 EKSGLLCRQEHLGF 406
K+ + E L +
Sbjct: 118 SKAMTMLTIEQLSY 131
>UNIPROTKB|C9JFR1 [details] [associations]
symbol:AIRE "Autoimmune regulator" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 EMBL:AP001060 IPI:IPI00031188
HGNC:HGNC:360 ProteinModelPortal:C9JFR1 SMR:C9JFR1 STRING:C9JFR1
Ensembl:ENST00000329347 HOGENOM:HOG000207903 ArrayExpress:C9JFR1
Bgee:C9JFR1 Uniprot:C9JFR1
Length = 244
Score = 162 (62.1 bits), Expect = 5.9e-10, P = 5.9e-10
Identities = 23/45 (51%), Positives = 31/45 (68%)
Query: 333 DDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLC 377
+D C VC GEL+CC+ CP FHL C+ PPLR++P W+C+ C
Sbjct: 89 EDECAVCRDGGELICCDGCPRAFHLACLSPPLREIPSGTWRCSSC 133
>UNIPROTKB|Q96EK2 [details] [associations]
symbol:PHF21B "PHD finger protein 21B" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 EMBL:CH471138
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS01359 HOVERGEN:HBG080293
HOGENOM:HOG000231466 EMBL:CR456448 EMBL:AK092243 EMBL:AK297317
EMBL:AL049760 EMBL:Z83838 EMBL:BC012187 IPI:IPI00738578
IPI:IPI00739761 IPI:IPI01009331 RefSeq:NP_001129334.1
RefSeq:NP_001229379.1 RefSeq:NP_612424.1 UniGene:Hs.254097
ProteinModelPortal:Q96EK2 SMR:Q96EK2 PhosphoSite:Q96EK2
DMDM:74731574 PRIDE:Q96EK2 DNASU:112885 Ensembl:ENST00000313237
Ensembl:ENST00000396103 Ensembl:ENST00000404079 GeneID:112885
KEGG:hsa:112885 UCSC:uc003bfn.3 UCSC:uc011aql.2 CTD:112885
GeneCards:GC22M045277 HGNC:HGNC:25161 neXtProt:NX_Q96EK2
PharmGKB:PA134872136 eggNOG:NOG291382 InParanoid:Q96EK2 OMA:SDKQALG
OrthoDB:EOG4P2Q2F PhylomeDB:Q96EK2 ChiTaRS:PHF21B GenomeRNAi:112885
NextBio:78697 ArrayExpress:Q96EK2 Bgee:Q96EK2 CleanEx:HS_PHF21B
Genevestigator:Q96EK2 GermOnline:ENSG00000056487 Uniprot:Q96EK2
Length = 531
Score = 157 (60.3 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 27/77 (35%), Positives = 41/77 (53%)
Query: 302 KRLRVLQFLTDQILITSPVREDLIHEGGFQYDDHCRVCHRVGELLCCETCPAVFHLECVD 361
KRL +L + + +T+ ED + +D+HC C R L C TCP +HL C++
Sbjct: 322 KRL-ASNYLNNPLFLTARANEDPCWKNEITHDEHCAACKRGANLQPCGTCPGAYHLSCLE 380
Query: 362 PPLRDVPQEDWQCNLCK 378
PPL+ P+ W C C+
Sbjct: 381 PPLKTAPKGVWVCPRCQ 397
Score = 55 (24.4 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 19/62 (30%), Positives = 31/62 (50%)
Query: 6 KRRGRPPKTPNTERPKFQVHL-LKKPQYLQNLEARGLNSPITSRTSSPQGS---ETSRRS 61
K+ RPP N E+ F V L L ++L+ ++++ S T++P S ET R+
Sbjct: 265 KKEDRPPTQENPEKIAFMVALGLVTTEHLEEIQSKRQERKRRS-TANPAYSGLLETERKR 323
Query: 62 TA 63
A
Sbjct: 324 LA 325
Score = 40 (19.1 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 11/23 (47%), Positives = 13/23 (56%)
Query: 8 RGRPPKTPNTERPKFQVHLLKKP 30
R RPPK P T + K V +K P
Sbjct: 88 RDRPPKQPPTFQ-KATVVSVKNP 109
>UNIPROTKB|F1NH78 [details] [associations]
symbol:F1NH78 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
EMBL:AADN02040929 EMBL:AADN02040930 IPI:IPI00571784
Ensembl:ENSGALT00000023340 ArrayExpress:F1NH78 Uniprot:F1NH78
Length = 1781
Score = 174 (66.3 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 31/60 (51%), Positives = 40/60 (66%)
Query: 322 EDLIHEGGFQY-DDH---CRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLC 377
ED EGG + DDH CRVC GELLCC+TCP+ +HL C++PPL ++P +W C C
Sbjct: 330 EDEEEEGGEEEEDDHMEFCRVCKDGGELLCCDTCPSSYHLHCLNPPLPEIPNGEWLCPRC 389
Score = 153 (58.9 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 28/75 (37%), Positives = 41/75 (54%)
Query: 325 IHEG-GFQYD--DHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHK 381
I EG G++ D D+C VC + GE++ C+TCP +HL C+DP L P+ W C C+
Sbjct: 262 IEEGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEG 321
Query: 382 VTGVTDCLPDVEKSG 396
+ D E+ G
Sbjct: 322 IQWEPKEEEDEEEEG 336
>ZFIN|ZDB-GENE-071008-4 [details] [associations]
symbol:aire "autoimmune regulator" species:7955
"Danio rerio" [GO:0045182 "translation regulator activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006959
"humoral immune response" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000770
InterPro:IPR001965 InterPro:IPR004865 InterPro:IPR008087
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01342 Pfam:PF03172
PRINTS:PR01711 PROSITE:PS50016 PROSITE:PS50864 PROSITE:PS51414
SMART:SM00184 SMART:SM00249 ZFIN:ZDB-GENE-071008-4 GO:GO:0005634
GO:GO:0005737 GO:GO:0006417 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0045182 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0006959 Gene3D:3.10.390.10 InterPro:IPR010919
SUPFAM:SSF63763 GeneTree:ENSGT00440000034278 EMBL:BX649390
IPI:IPI00876716 Ensembl:ENSDART00000079317 Bgee:F1Q623
Uniprot:F1Q623
Length = 513
Score = 167 (63.8 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 24/50 (48%), Positives = 35/50 (70%)
Query: 333 DDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHKV 382
DD C VC GEL+CC+ CP FHL C+ PPL +P+ W+C LC+++++
Sbjct: 294 DDECAVCKDGGELICCDGCPRAFHLSCLVPPLTSIPRGTWRCQLCQSNRL 343
>SGD|S000004680 [details] [associations]
symbol:RCO1 "Essential subunit of the histone deacetylase
Rpd3S complex" species:4932 "Saccharomyces cerevisiae" [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0060195 "negative regulation of
antisense RNA transcription" evidence=IMP] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0033698 "Rpd3L complex" evidence=IDA] [GO:0016575
"histone deacetylation" evidence=IMP] [GO:0032221 "Rpd3S complex"
evidence=IDA] [GO:0000118 "histone deacetylase complex"
evidence=IDA] [GO:0030174 "regulation of DNA-dependent DNA
replication initiation" evidence=IMP] [GO:0006368 "transcription
elongation from RNA polymerase II promoter" evidence=IGI]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00249
SGD:S000004680 GO:GO:0046872 GO:GO:0008270 EMBL:Z48952
EMBL:BK006946 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0006368 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0033698 GO:GO:0016575 GO:GO:0030174
GO:GO:0032221 GO:GO:0060195 eggNOG:NOG145066
GeneTree:ENSGT00440000033777 PIR:S52835 RefSeq:NP_013791.1
ProteinModelPortal:Q04779 SMR:Q04779 DIP:DIP-1959N IntAct:Q04779
MINT:MINT-497703 STRING:Q04779 PaxDb:Q04779 PeptideAtlas:Q04779
EnsemblFungi:YMR075W GeneID:855097 KEGG:sce:YMR075W CYGD:YMR075w
HOGENOM:HOG000066043 OMA:FLCCDTC OrthoDB:EOG4TQQJV NextBio:978414
Genevestigator:Q04779 GermOnline:YMR075W Uniprot:Q04779
Length = 684
Score = 165 (63.1 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 37/109 (33%), Positives = 55/109 (50%)
Query: 277 ESDKTFDEEVLNILNTCEYPFTNIEKRLRVLQFLTDQILITSPVREDLIHEGG-----FQ 331
ESD+ D + L+ + T TN + F + I TS E + + F+
Sbjct: 201 ESDR--DNKKLSNIRTKIILSTNATYDSKSKLFGQNSIKSTSNASEKIFRDKNNSTIDFE 258
Query: 332 YDDHCRVCHRVGELLCCETCPAVFHLECVDPPL--RDVPQEDWQCNLCK 378
+D C C++ G LCC+TCP FH C+DPP+ ++P+ DW CN CK
Sbjct: 259 NEDFCSACNQSGSFLCCDTCPKSFHFLCLDPPIDPNNLPKGDWHCNECK 307
Score = 47 (21.6 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 14/31 (45%), Positives = 17/31 (54%)
Query: 43 SPITSRTSSPQGSETSRRSTA-KKGTKRKSN 72
SP S +SSP S S S+ KK KR S+
Sbjct: 11 SPSHSNSSSPSSSSLSSSSSKEKKRPKRLSS 41
>UNIPROTKB|O43918 [details] [associations]
symbol:AIRE "Autoimmune regulator" species:9606 "Homo
sapiens" [GO:0045182 "translation regulator activity" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006959 "humoral immune response" evidence=IEA] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0003682 "chromatin binding" evidence=IDA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0042393 "histone binding" evidence=IDA]
[GO:0008270 "zinc ion binding" evidence=IDA] [GO:0006955 "immune
response" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0015629 "actin cytoskeleton" evidence=IDA] InterPro:IPR000770
InterPro:IPR001965 InterPro:IPR004865 InterPro:IPR008087
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01342 Pfam:PF03172
PRINTS:PR01711 PROSITE:PS50016 PROSITE:PS50864 PROSITE:PS51414
SMART:SM00249 SMART:SM00258 GO:GO:0005886 GO:GO:0005634
GO:GO:0005737 GO:GO:0045893 GO:GO:0006955 GO:GO:0006417
GO:GO:0046872 GO:GO:0015629 GO:GO:0008270 GO:GO:0045944
EMBL:CH471079 GO:GO:0006351 GO:GO:0003682 GO:GO:0045182
GO:GO:0044212 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 EMBL:AB006682 EMBL:AB006683 EMBL:AB006684
EMBL:AB006685 EMBL:Z97990 EMBL:AJ009610 EMBL:AP001754 EMBL:AP001060
EMBL:BC137268 EMBL:BC137270 IPI:IPI00015149 IPI:IPI00031178
IPI:IPI00031188 RefSeq:NP_000374.1 UniGene:Hs.129829 PDB:1XWH
PDB:2KE1 PDB:2KFT PDB:2LRI PDBsum:1XWH PDBsum:2KE1 PDBsum:2KFT
PDBsum:2LRI ProteinModelPortal:O43918 SMR:O43918 DIP:DIP-47504N
IntAct:O43918 MINT:MINT-6542056 STRING:O43918 PhosphoSite:O43918
PRIDE:O43918 Ensembl:ENST00000291582 Ensembl:ENST00000337909
Ensembl:ENST00000397994 Ensembl:ENST00000468282 GeneID:326
KEGG:hsa:326 UCSC:uc002zei.2 CTD:326 GeneCards:GC21P045705
HGNC:HGNC:360 HPA:HPA038267 MIM:109100 MIM:240300 MIM:607358
neXtProt:NX_O43918 Orphanet:3453 PharmGKB:PA24654 eggNOG:NOG317492
HOGENOM:HOG000060093 HOVERGEN:HBG014961 InParanoid:O43918 KO:K10603
OMA:NDDECAV OrthoDB:EOG4VX25M PhylomeDB:O43918
EvolutionaryTrace:O43918 GenomeRNAi:326 NextBio:1337
ArrayExpress:O43918 Bgee:O43918 CleanEx:HS_AIRE
Genevestigator:O43918 GermOnline:ENSG00000160224 GO:GO:0042393
GO:GO:0006959 Gene3D:3.10.390.10 InterPro:IPR010919 SUPFAM:SSF63763
Uniprot:O43918
Length = 545
Score = 162 (62.1 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 23/45 (51%), Positives = 31/45 (68%)
Query: 333 DDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLC 377
+D C VC GEL+CC+ CP FHL C+ PPLR++P W+C+ C
Sbjct: 296 EDECAVCRDGGELICCDGCPRAFHLACLSPPLREIPSGTWRCSSC 340
Score = 47 (21.6 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 11/39 (28%), Positives = 20/39 (51%)
Query: 47 SRTSSPQGSETSRRSTAKKGTKRKSNPPTXXXXXXNQKR 85
+R ++P + + R TA G++ K+ PP Q+R
Sbjct: 138 ARAAAP--AALTPRGTASPGSQLKAKPPKKPESSAEQQR 174
>UNIPROTKB|C9JL37 [details] [associations]
symbol:AIRE "Autoimmune regulator" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 EMBL:AP001060 HGNC:HGNC:360
HOGENOM:HOG000060093 IPI:IPI00480202 ProteinModelPortal:C9JL37
SMR:C9JL37 STRING:C9JL37 Ensembl:ENST00000355347
ArrayExpress:C9JL37 Bgee:C9JL37 Uniprot:C9JL37
Length = 338
Score = 162 (62.1 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 23/45 (51%), Positives = 31/45 (68%)
Query: 333 DDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLC 377
+D C VC GEL+CC+ CP FHL C+ PPLR++P W+C+ C
Sbjct: 89 EDECAVCRDGGELICCDGCPRAFHLACLSPPLREIPSGTWRCSSC 133
>UNIPROTKB|E9PU01 [details] [associations]
symbol:Chd4 "Protein Chd4" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 RGD:620064 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
IPI:IPI01016558 PRIDE:E9PU01 Ensembl:ENSRNOT00000055970
ArrayExpress:E9PU01 Uniprot:E9PU01
Length = 1915
Score = 167 (63.8 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 322 EDLIHE-GGF--QYDDH----CRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQC 374
E+++ E GG + DDH CRVC GELLCC+TCP+ +H+ C++PPL ++P +W C
Sbjct: 424 EEILEEVGGDPEEEDDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLC 483
Query: 375 NLCKAHKVTG 384
C + G
Sbjct: 484 PRCTCPALKG 493
Score = 144 (55.7 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 21/59 (35%), Positives = 36/59 (61%)
Query: 322 EDLIHEGGFQYD--DHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCK 378
E++ G++ D D+C VC + GE++ C+TCP +H+ C+DP + P+ W C C+
Sbjct: 350 EEVTAVDGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCE 408
Score = 54 (24.1 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 17/67 (25%), Positives = 32/67 (47%)
Query: 7 RRGRPPKTPNTERPKFQV--HLLKKPQYLQNLEARGLNSPITSRTSSPQGSETSRRSTAK 64
++ R PK P ++R K ++ + P++++ E L S +P G + ++ K
Sbjct: 58 KKPRDPKIPKSKRQKKELGDSSGEGPEFVEEDEEAALRSDSEGSDYTP-GKKKKKKLGPK 116
Query: 65 KGTKRKS 71
K K KS
Sbjct: 117 KEKKSKS 123
>RGD|1311139 [details] [associations]
symbol:Aire "autoimmune regulator" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0003682 "chromatin binding" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005622 "intracellular"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0005886 "plasma membrane"
evidence=IEA;ISO] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0006959 "humoral immune response"
evidence=IEA;ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0008270 "zinc ion binding" evidence=IEA;ISO] [GO:0015629 "actin
cytoskeleton" evidence=IEA;ISO] [GO:0042393 "histone binding"
evidence=IEA;ISO] [GO:0042802 "identical protein binding"
evidence=IEA;ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0045182 "translation regulator
activity" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000770 InterPro:IPR001965 InterPro:IPR004865
InterPro:IPR008087 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01342
Pfam:PF03172 PRINTS:PR01711 PROSITE:PS50016 PROSITE:PS50864
PROSITE:PS51414 SMART:SM00249 SMART:SM00258 RGD:1311139
GO:GO:0005886 GO:GO:0005634 GO:GO:0005737 GO:GO:0006417
GO:GO:0046872 GO:GO:0015629 GO:GO:0008270 GO:GO:0045944
GO:GO:0003682 GO:GO:0045182 GO:GO:0044212 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 OMA:NDDECAV OrthoDB:EOG4VX25M
GO:GO:0006959 Gene3D:3.10.390.10 InterPro:IPR010919 SUPFAM:SSF63763
GeneTree:ENSGT00440000034278 IPI:IPI00360526
Ensembl:ENSRNOT00000001611 UCSC:RGD:1311139 Uniprot:D3ZV49
Length = 551
Score = 165 (63.1 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 25/56 (44%), Positives = 37/56 (66%)
Query: 322 EDLIHEGGFQYDDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLC 377
E +H+ + +D C VCH GEL+CC+ CP FHL C+ PPL+++P W+C+ C
Sbjct: 290 EPQVHQ---KNEDECAVCHDGGELICCDGCPRAFHLACLSPPLQEIPSGLWRCSCC 342
>MGI|MGI:1338803 [details] [associations]
symbol:Aire "autoimmune regulator (autoimmune
polyendocrinopathy candidiasis ectodermal dystrophy)" species:10090
"Mus musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=ISO] [GO:0005622 "intracellular"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006959 "humoral
immune response" evidence=IMP] [GO:0008270 "zinc ion binding"
evidence=ISO] [GO:0042393 "histone binding" evidence=ISO]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0044212
"transcription regulatory region DNA binding" evidence=ISO]
[GO:0045182 "translation regulator activity" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IMP;IDA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000770 InterPro:IPR001965 InterPro:IPR004865
InterPro:IPR008087 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01342
Pfam:PF03172 PRINTS:PR01711 PROSITE:PS50016 PROSITE:PS50864
PROSITE:PS51414 SMART:SM00184 SMART:SM00249 SMART:SM00258
MGI:MGI:1338803 GO:GO:0005886 GO:GO:0005634 GO:GO:0005737
GO:GO:0006417 GO:GO:0046872 GO:GO:0015629 GO:GO:0008270
GO:GO:0045944 GO:GO:0006351 GO:GO:0003682 GO:GO:0045182
GO:GO:0044212 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 CTD:326 eggNOG:NOG317492 HOVERGEN:HBG014961
KO:K10603 OMA:NDDECAV GO:GO:0042393 GO:GO:0006959
Gene3D:3.10.390.10 InterPro:IPR010919 SUPFAM:SSF63763 EMBL:AF105002
EMBL:AF128772 EMBL:AF128773 EMBL:AJ007715 EMBL:AF079536
EMBL:AJ132243 EMBL:AF128115 EMBL:AF128116 EMBL:AF128117
EMBL:AF128118 EMBL:AF128119 EMBL:AF128120 EMBL:AF128121
EMBL:AF128122 EMBL:AF128123 EMBL:AF128124 EMBL:AF128125
EMBL:AJ243821 IPI:IPI00129025 IPI:IPI00223523 IPI:IPI00223524
IPI:IPI00223525 IPI:IPI00230215 IPI:IPI00230216 IPI:IPI00230217
IPI:IPI00230218 IPI:IPI00230219 IPI:IPI00230220 IPI:IPI00230221
IPI:IPI00400171 RefSeq:NP_001258478.1 RefSeq:NP_001258479.1
RefSeq:NP_001258480.1 RefSeq:NP_001258481.1 RefSeq:NP_001258482.1
RefSeq:NP_001258483.1 RefSeq:NP_001258484.1 RefSeq:NP_001258485.1
RefSeq:NP_001258486.1 RefSeq:NP_001258487.1 RefSeq:NP_001258488.1
RefSeq:NP_033776.1 UniGene:Mm.35300 ProteinModelPortal:Q9Z0E3
SMR:Q9Z0E3 DIP:DIP-31030N IntAct:Q9Z0E3 STRING:Q9Z0E3
PhosphoSite:Q9Z0E3 PRIDE:Q9Z0E3 Ensembl:ENSMUST00000019257
Ensembl:ENSMUST00000105395 Ensembl:ENSMUST00000105396
Ensembl:ENSMUST00000128241 Ensembl:ENSMUST00000130972
Ensembl:ENSMUST00000140636 Ensembl:ENSMUST00000145975
Ensembl:ENSMUST00000148469 Ensembl:ENSMUST00000154374
Ensembl:ENSMUST00000155021 Ensembl:ENSMUST00000156417 GeneID:11634
KEGG:mmu:11634 UCSC:uc007fws.1 UCSC:uc007fwt.1 UCSC:uc007fwu.1
UCSC:uc007fwv.1 UCSC:uc007fww.1 UCSC:uc007fwx.1 UCSC:uc007fwz.1
UCSC:uc007fxa.1 UCSC:uc007fxb.1 GeneTree:ENSGT00440000034278
InParanoid:Q9Z0E3 ChiTaRS:AIRE NextBio:279201 Bgee:Q9Z0E3
Genevestigator:Q9Z0E3 GermOnline:ENSMUSG00000000731 Uniprot:Q9Z0E3
Length = 552
Score = 165 (63.1 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 24/50 (48%), Positives = 34/50 (68%)
Query: 333 DDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHKV 382
+D C VCH GEL+CC+ CP FHL C+ PPL+++P W+C+ C +V
Sbjct: 298 EDECAVCHDGGELICCDGCPRAFHLACLSPPLQEIPSGLWRCSCCLQGRV 347
>UNIPROTKB|F5GWX5 [details] [associations]
symbol:CHD4 "Chromodomain-helicase-DNA-binding protein 4"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:AC006064
IPI:IPI00000846 HGNC:HGNC:1919 ChiTaRS:CHD4
ProteinModelPortal:F5GWX5 SMR:F5GWX5 PRIDE:F5GWX5
Ensembl:ENST00000544040 UCSC:uc001qpn.3 ArrayExpress:F5GWX5
Bgee:F5GWX5 Uniprot:F5GWX5
Length = 1905
Score = 167 (63.8 bits), Expect = 4.0e-09, Sum P(2) = 4.0e-09
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 322 EDLIHE-GGF--QYDDH----CRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQC 374
E+++ E GG + DDH CRVC GELLCC+TCP+ +H+ C++PPL ++P +W C
Sbjct: 424 EEILEEVGGDLEEEDDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLC 483
Query: 375 NLCKAHKVTG 384
C + G
Sbjct: 484 PRCTCPALKG 493
Score = 144 (55.7 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 21/59 (35%), Positives = 36/59 (61%)
Query: 322 EDLIHEGGFQYD--DHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCK 378
E++ G++ D D+C VC + GE++ C+TCP +H+ C+DP + P+ W C C+
Sbjct: 350 EEVTAVDGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCE 408
Score = 53 (23.7 bits), Expect = 4.0e-09, Sum P(2) = 4.0e-09
Identities = 17/67 (25%), Positives = 32/67 (47%)
Query: 7 RRGRPPKTPNTERPKFQV--HLLKKPQYLQNLEARGLNSPITSRTSSPQGSETSRRSTAK 64
++ R PK P ++R K ++ + P++++ E L S +P G + ++ K
Sbjct: 58 KKPRDPKIPKSKRQKKELGDSSGEGPEFVEEEEEVALRSDSEGSDYTP-GKKKKKKLGPK 116
Query: 65 KGTKRKS 71
K K KS
Sbjct: 117 KEKKSKS 123
>MGI|MGI:1344380 [details] [associations]
symbol:Chd4 "chromodomain helicase DNA binding protein 4"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001103 "RNA polymerase II repressing
transcription factor binding" evidence=ISO] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IPI] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=ISO;IDA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016818
"hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0043234
"protein complex" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 MGI:MGI:1344380 Pfam:PF00385
GO:GO:0005524 GO:GO:0005737 GO:GO:0005813 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006351
GO:GO:0016568 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 PROSITE:PS00598
GeneTree:ENSGT00560000076896 HOGENOM:HOG000231124
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
HOVERGEN:HBG005326 CTD:1108 KO:K11643 OrthoDB:EOG4WH8JX
ChiTaRS:CHD4 EMBL:BC058578 IPI:IPI00396802 RefSeq:NP_666091.1
UniGene:Mm.333388 ProteinModelPortal:Q6PDQ2 SMR:Q6PDQ2
DIP:DIP-59651N IntAct:Q6PDQ2 STRING:Q6PDQ2 PhosphoSite:Q6PDQ2
PaxDb:Q6PDQ2 PRIDE:Q6PDQ2 Ensembl:ENSMUST00000056889 GeneID:107932
KEGG:mmu:107932 UCSC:uc009dtk.1 NextBio:359735 PMAP-CutDB:Q6PDQ2
Bgee:Q6PDQ2 CleanEx:MM_CHD4 Genevestigator:Q6PDQ2
GermOnline:ENSMUSG00000063870 Uniprot:Q6PDQ2
Length = 1915
Score = 167 (63.8 bits), Expect = 4.0e-09, Sum P(2) = 4.0e-09
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 322 EDLIHE-GGF--QYDDH----CRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQC 374
E+++ E GG + DDH CRVC GELLCC+TCP+ +H+ C++PPL ++P +W C
Sbjct: 424 EEILEEVGGDPEEEDDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLC 483
Query: 375 NLCKAHKVTG 384
C + G
Sbjct: 484 PRCTCPALKG 493
Score = 144 (55.7 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 21/59 (35%), Positives = 36/59 (61%)
Query: 322 EDLIHEGGFQYD--DHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCK 378
E++ G++ D D+C VC + GE++ C+TCP +H+ C+DP + P+ W C C+
Sbjct: 350 EEVTAVDGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCE 408
Score = 53 (23.7 bits), Expect = 4.0e-09, Sum P(2) = 4.0e-09
Identities = 17/67 (25%), Positives = 32/67 (47%)
Query: 7 RRGRPPKTPNTERPKFQV--HLLKKPQYLQNLEARGLNSPITSRTSSPQGSETSRRSTAK 64
++ R PK P ++R K ++ + P++++ E L S +P G + ++ K
Sbjct: 58 KKPRDPKIPKSKRQKKELGDSSGEGPEFVEEEEEVALRSDSEGSDYTP-GKKKKKKLGPK 116
Query: 65 KGTKRKS 71
K K KS
Sbjct: 117 KEKKSKS 123
>UNIPROTKB|I3LQA6 [details] [associations]
symbol:AIRE "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0042802 "identical
protein binding" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006959 "humoral
immune response" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0045182 "translation regulator activity"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000770
InterPro:IPR001965 InterPro:IPR004865 InterPro:IPR008087
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01342 Pfam:PF03172
PRINTS:PR01711 PROSITE:PS50016 PROSITE:PS50864 PROSITE:PS51414
SMART:SM00184 SMART:SM00249 GO:GO:0005886 GO:GO:0005634
GO:GO:0005737 GO:GO:0006417 GO:GO:0046872 GO:GO:0015629
GO:GO:0008270 GO:GO:0045944 GO:GO:0003682 GO:GO:0045182
GO:GO:0044212 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 OMA:NDDECAV GO:GO:0006959 Gene3D:3.10.390.10
InterPro:IPR010919 SUPFAM:SSF63763 GeneTree:ENSGT00440000034278
EMBL:FP312783 Ensembl:ENSSSCT00000030488 Uniprot:I3LQA6
Length = 564
Score = 166 (63.5 bits), Expect = 6.3e-09, Sum P(2) = 6.3e-09
Identities = 24/45 (53%), Positives = 31/45 (68%)
Query: 333 DDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLC 377
+D C VC GEL+CC+ CP FHL C+ PPLRD+P W+C+ C
Sbjct: 304 EDECAVCRDGGELICCDGCPRAFHLACLSPPLRDIPSGTWRCSSC 348
Score = 39 (18.8 bits), Expect = 6.3e-09, Sum P(2) = 6.3e-09
Identities = 18/61 (29%), Positives = 27/61 (44%)
Query: 7 RRGRPPKTPNTERPKFQVHLLKKPQYLQNLEARGLNSP--ITSR-TSSPQGSETSRRSTA 63
R+ R P + K V L + P + LE P ++ R TSSP GS+ + +
Sbjct: 111 RKARKPLASS----KAAVLLPRPPAKRKALEEPRATPPTALSPRATSSPAGSQAKAKPSK 166
Query: 64 K 64
K
Sbjct: 167 K 167
>UNIPROTKB|J9NRN3 [details] [associations]
symbol:CHD5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 EMBL:AAEX03003895
EMBL:AAEX03003896 EMBL:AAEX03003897 Ensembl:ENSCAFT00000044104
Uniprot:J9NRN3
Length = 1195
Score = 167 (63.8 bits), Expect = 6.7e-09, P = 6.7e-09
Identities = 30/68 (44%), Positives = 41/68 (60%)
Query: 322 EDLIHEGGFQY--DDH---CRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNL 376
+D EGG + DDH CRVC GELLCC+ CP+ +HL C++PPL ++P +W C
Sbjct: 374 DDEEEEGGCEEEEDDHMEFCRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPR 433
Query: 377 CKAHKVTG 384
C + G
Sbjct: 434 CTCPPLKG 441
Score = 155 (59.6 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 32/90 (35%), Positives = 48/90 (53%)
Query: 325 IHEG-GFQYD--DHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHK 381
I +G G++ D D+C VC + GE++ C+TCP +HL C+DP L P+ W C C+
Sbjct: 306 IDDGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEG 365
Query: 382 VTGVTDCLPDVEKSGLLCRQE---HLGFDR 408
+ D E+ G C +E H+ F R
Sbjct: 366 IQWEPKDDDDEEEEGG-CEEEEDDHMEFCR 394
>UNIPROTKB|F2Z2R5 [details] [associations]
symbol:CHD5 "Chromodomain-helicase-DNA-binding protein 5"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:AL031847
GO:GO:0008026 InterPro:IPR023780 EMBL:AL035406 HGNC:HGNC:16816
ChiTaRS:CHD5 IPI:IPI00444866 ProteinModelPortal:F2Z2R5 SMR:F2Z2R5
Ensembl:ENST00000496404 ArrayExpress:F2Z2R5 Bgee:F2Z2R5
Uniprot:F2Z2R5
Length = 1225
Score = 167 (63.8 bits), Expect = 6.9e-09, P = 6.9e-09
Identities = 30/68 (44%), Positives = 41/68 (60%)
Query: 322 EDLIHEGGFQY--DDH---CRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNL 376
+D EGG + DDH CRVC GELLCC+ CP+ +HL C++PPL ++P +W C
Sbjct: 400 DDEEEEGGCEEEEDDHMEFCRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPR 459
Query: 377 CKAHKVTG 384
C + G
Sbjct: 460 CTCPPLKG 467
Score = 155 (59.6 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 32/90 (35%), Positives = 48/90 (53%)
Query: 325 IHEG-GFQYD--DHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHK 381
I +G G++ D D+C VC + GE++ C+TCP +HL C+DP L P+ W C C+
Sbjct: 332 IDDGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEG 391
Query: 382 VTGVTDCLPDVEKSGLLCRQE---HLGFDR 408
+ D E+ G C +E H+ F R
Sbjct: 392 IQWEPKDDDDEEEEGG-CEEEEDDHMEFCR 420
>UNIPROTKB|F1NME8 [details] [associations]
symbol:Gga.29865 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR002893
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF01753
PRINTS:PR00503 PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50865 SMART:SM00249 SMART:SM00297 Pfam:PF00855
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 InterPro:IPR021931 Pfam:PF12064
GeneTree:ENSGT00530000063428 OMA:VDNIRRK EMBL:AADN02019301
IPI:IPI00581329 Ensembl:ENSGALT00000007232 Uniprot:F1NME8
Length = 1197
Score = 166 (63.5 bits), Expect = 8.6e-09, P = 8.6e-09
Identities = 36/94 (38%), Positives = 54/94 (57%)
Query: 313 QILITSPVREDLIHEGGFQYDDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDW 372
Q L T PV D++ + G + D +C VCHR G++LCCE CP V+H +C+ L P+ DW
Sbjct: 89 QPLTTDPV--DVVPQDG-RNDFYCWVCHREGQVLCCELCPRVYHAKCLK--LTAEPEGDW 143
Query: 373 QCNLCKAHKVTGVTDCLPDVEKSGLLCRQEHLGF 406
C C+ K+T V +C+ K+ + E L +
Sbjct: 144 FCPECE--KIT-VAECIETQSKAMTMLTTEQLSY 174
>UNIPROTKB|F1SSZ2 [details] [associations]
symbol:CHD5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
EMBL:FP102454 Ensembl:ENSSSCT00000019561 Uniprot:F1SSZ2
Length = 1667
Score = 167 (63.8 bits), Expect = 9.9e-09, P = 9.9e-09
Identities = 30/68 (44%), Positives = 41/68 (60%)
Query: 322 EDLIHEGGFQY--DDH---CRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNL 376
+D EGG + DDH CRVC GELLCC+ CP+ +HL C++PPL ++P +W C
Sbjct: 316 DDEEEEGGCEEEEDDHMEFCRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPR 375
Query: 377 CKAHKVTG 384
C + G
Sbjct: 376 CTCPPLKG 383
Score = 155 (59.6 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 32/90 (35%), Positives = 48/90 (53%)
Query: 325 IHEG-GFQYD--DHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHK 381
I +G G++ D D+C VC + GE++ C+TCP +HL C+DP L P+ W C C+
Sbjct: 248 IDDGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEG 307
Query: 382 VTGVTDCLPDVEKSGLLCRQE---HLGFDR 408
+ D E+ G C +E H+ F R
Sbjct: 308 IQWEPKDDDDEEEEGG-CEEEEDDHMEFCR 336
>UNIPROTKB|F1PPM4 [details] [associations]
symbol:AIRE "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045182 "translation regulator activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006959 "humoral immune response" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000770
InterPro:IPR001965 InterPro:IPR004865 InterPro:IPR008087
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01342 Pfam:PF03172
PRINTS:PR01711 PROSITE:PS50016 PROSITE:PS50864 PROSITE:PS51414
SMART:SM00249 SMART:SM00258 GO:GO:0005634 GO:GO:0005737
GO:GO:0006417 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0045182 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 OMA:NDDECAV GO:GO:0006959 Gene3D:3.10.390.10
InterPro:IPR010919 SUPFAM:SSF63763 GeneTree:ENSGT00440000034278
EMBL:AAEX03016632 Ensembl:ENSCAFT00000017065 Uniprot:F1PPM4
Length = 547
Score = 161 (61.7 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 23/45 (51%), Positives = 30/45 (66%)
Query: 333 DDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLC 377
+D C VC GEL+CC+ CP FHL C+ PPL D+P W+C+ C
Sbjct: 296 EDECAVCRDGGELICCDGCPRAFHLACLSPPLHDIPSGTWRCSSC 340
>UNIPROTKB|F1RIM3 [details] [associations]
symbol:CHD5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:KRIDDGD EMBL:FP102454 Ensembl:ENSSSCT00000003736 Uniprot:F1RIM3
Length = 1723
Score = 167 (63.8 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 30/68 (44%), Positives = 41/68 (60%)
Query: 322 EDLIHEGGFQY--DDH---CRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNL 376
+D EGG + DDH CRVC GELLCC+ CP+ +HL C++PPL ++P +W C
Sbjct: 332 DDEEEEGGCEEEEDDHMEFCRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPR 391
Query: 377 CKAHKVTG 384
C + G
Sbjct: 392 CTCPPLKG 399
Score = 155 (59.6 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 32/90 (35%), Positives = 48/90 (53%)
Query: 325 IHEG-GFQYD--DHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHK 381
I +G G++ D D+C VC + GE++ C+TCP +HL C+DP L P+ W C C+
Sbjct: 264 IDDGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEG 323
Query: 382 VTGVTDCLPDVEKSGLLCRQE---HLGFDR 408
+ D E+ G C +E H+ F R
Sbjct: 324 IQWEPKDDDDEEEEGG-CEEEEDDHMEFCR 352
>ZFIN|ZDB-GENE-030131-2199 [details] [associations]
symbol:prkcbp1l "protein kinase C binding protein
1, like" species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0016310
"phosphorylation" evidence=IEA] InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR002893 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF01753 PRINTS:PR00503
PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50865
SMART:SM00249 SMART:SM00297 Pfam:PF00855 ZFIN:ZDB-GENE-030131-2199
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 InterPro:IPR021931 Pfam:PF12064
GeneTree:ENSGT00530000063428 EMBL:BX324190 IPI:IPI00611878
Ensembl:ENSDART00000124510 ArrayExpress:F1QYK7 Bgee:F1QYK7
Uniprot:F1QYK7
Length = 1131
Score = 165 (63.1 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 35/98 (35%), Positives = 55/98 (56%)
Query: 309 FLTDQILITSPVREDLIHEGGFQYDDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVP 368
++ L T PV D++ + G + D +C VCHR G++LCCE CP V+H +C+ L P
Sbjct: 87 YVKQPALTTDPV--DVVPQDG-RNDFYCWVCHREGQVLCCELCPRVYHAKCLK--LAAEP 141
Query: 369 QEDWQCNLCKAHKVTGVTDCLPDVEKSGLLCRQEHLGF 406
+ DW C C+ K+T V +C+ K+ + E L +
Sbjct: 142 EGDWFCPECE--KIT-VAECIETQSKAMTMLNLEQLSY 176
>UNIPROTKB|E2R1M3 [details] [associations]
symbol:CHD5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:KRIDDGD EMBL:AAEX03003895 EMBL:AAEX03003896 EMBL:AAEX03003897
Ensembl:ENSCAFT00000031086 Uniprot:E2R1M3
Length = 1812
Score = 167 (63.8 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 30/68 (44%), Positives = 41/68 (60%)
Query: 322 EDLIHEGGFQY--DDH---CRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNL 376
+D EGG + DDH CRVC GELLCC+ CP+ +HL C++PPL ++P +W C
Sbjct: 263 DDEEEEGGCEEEEDDHMEFCRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPR 322
Query: 377 CKAHKVTG 384
C + G
Sbjct: 323 CTCPPLKG 330
Score = 155 (59.6 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 32/90 (35%), Positives = 48/90 (53%)
Query: 325 IHEG-GFQYD--DHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHK 381
I +G G++ D D+C VC + GE++ C+TCP +HL C+DP L P+ W C C+
Sbjct: 195 IDDGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEG 254
Query: 382 VTGVTDCLPDVEKSGLLCRQE---HLGFDR 408
+ D E+ G C +E H+ F R
Sbjct: 255 IQWEPKDDDDEEEEGG-CEEEEDDHMEFCR 283
>UNIPROTKB|Q9ULU4 [details] [associations]
symbol:ZMYND8 "Protein kinase C-binding protein 1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISS] [GO:0070491 "repressing
transcription factor binding" evidence=ISS] [GO:0001106 "RNA
polymerase II transcription corepressor activity" evidence=ISS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISS] InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR002893 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF01753 PROSITE:PS01360
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50865 SMART:SM00249
SMART:SM00297 EMBL:U48251 Pfam:PF00855 GO:GO:0005634 EMBL:CH471077
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0001106 Gene3D:1.20.920.10 SUPFAM:SSF47370
eggNOG:COG5076 InterPro:IPR000313 PROSITE:PS50812 GO:GO:0070491
EMBL:AL049540 EMBL:AL022342 EMBL:AF233453 EMBL:AF454056
EMBL:AF273045 EMBL:DQ082998 EMBL:DQ082999 EMBL:DQ368673
EMBL:DQ368674 EMBL:DQ368679 EMBL:DQ368669 EMBL:DQ368670
EMBL:DQ368671 EMBL:AB032951 EMBL:AK299899 EMBL:BX641005
EMBL:AL031666 EMBL:BC030721 IPI:IPI00385321 IPI:IPI00418316
IPI:IPI00640598 IPI:IPI00718938 IPI:IPI00719508 IPI:IPI00741204
IPI:IPI00789719 IPI:IPI00941061 IPI:IPI00946867 IPI:IPI01008745
IPI:IPI01008942 IPI:IPI01008945 IPI:IPI01008959 IPI:IPI01014325
RefSeq:NP_036540.3 RefSeq:NP_898868.1 RefSeq:NP_898869.1
UniGene:Hs.446240 UniGene:Hs.658553 UniGene:Hs.668465
ProteinModelPortal:Q9ULU4 SMR:Q9ULU4 IntAct:Q9ULU4
MINT:MINT-1183677 STRING:Q9ULU4 PhosphoSite:Q9ULU4 DMDM:25453223
PaxDb:Q9ULU4 PRIDE:Q9ULU4 Ensembl:ENST00000311275
Ensembl:ENST00000352431 Ensembl:ENST00000355972
Ensembl:ENST00000360911 Ensembl:ENST00000461685 GeneID:23613
KEGG:hsa:23613 UCSC:uc002xsu.1 UCSC:uc002xsw.1 UCSC:uc002xsx.1
UCSC:uc002xta.1 UCSC:uc002xtb.1 UCSC:uc002xtc.1 UCSC:uc002xtd.1
UCSC:uc002xte.1 UCSC:uc002xtf.1 UCSC:uc010zya.1 CTD:23613
GeneCards:GC20M045837 H-InvDB:HIX0015888 HGNC:HGNC:9397
HPA:HPA020949 neXtProt:NX_Q9ULU4 PharmGKB:PA162409890
HOVERGEN:HBG031823 GenomeRNAi:23613 NextBio:46322
ArrayExpress:Q9ULU4 Bgee:Q9ULU4 CleanEx:HS_ZMYND8
Genevestigator:Q9ULU4 GermOnline:ENSG00000101040 InterPro:IPR021931
Pfam:PF12064 Uniprot:Q9ULU4
Length = 1186
Score = 165 (63.1 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 36/94 (38%), Positives = 54/94 (57%)
Query: 313 QILITSPVREDLIHEGGFQYDDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDW 372
Q L T PV D++ + G + D +C VCHR G++LCCE CP V+H +C+ L P+ DW
Sbjct: 71 QPLTTDPV--DVVPQDG-RNDFYCWVCHREGQVLCCELCPRVYHAKCLR--LTSEPEGDW 125
Query: 373 QCNLCKAHKVTGVTDCLPDVEKSGLLCRQEHLGF 406
C C+ K+T V +C+ K+ + E L +
Sbjct: 126 FCPECE--KIT-VAECIETQSKAMTMLTIEQLSY 156
>UNIPROTKB|F1MY77 [details] [associations]
symbol:ZMYND8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR002893
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF01753
PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50865
SMART:SM00249 SMART:SM00297 Pfam:PF00855 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 InterPro:IPR021931 Pfam:PF12064
GeneTree:ENSGT00530000063428 OMA:VDNIRRK EMBL:DAAA02036805
IPI:IPI00727342 UniGene:Bt.52435 Ensembl:ENSBTAT00000004258
NextBio:20867417 Uniprot:F1MY77
Length = 1193
Score = 165 (63.1 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 36/94 (38%), Positives = 54/94 (57%)
Query: 313 QILITSPVREDLIHEGGFQYDDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDW 372
Q L T PV D++ + G + D +C VCHR G++LCCE CP V+H +C+ L P+ DW
Sbjct: 91 QPLTTDPV--DVVPQDG-RNDFYCWVCHREGQVLCCELCPRVYHAKCLR--LTSEPEGDW 145
Query: 373 QCNLCKAHKVTGVTDCLPDVEKSGLLCRQEHLGF 406
C C+ K+T V +C+ K+ + E L +
Sbjct: 146 FCPECE--KIT-VAECIETQSKAMTMLTIEQLSY 176
>UNIPROTKB|F5H0X3 [details] [associations]
symbol:ZMYND8 "Protein kinase C-binding protein 1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR002893 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF01753 PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50865 SMART:SM00249 SMART:SM00297 Pfam:PF00855
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 EMBL:AL049540 EMBL:AL031666
IPI:IPI00418316 HGNC:HGNC:9397 InterPro:IPR021931 Pfam:PF12064
EMBL:AL390212 ProteinModelPortal:F5H0X3 SMR:F5H0X3 PRIDE:F5H0X3
Ensembl:ENST00000536340 UCSC:uc010zxy.1 OMA:VDNIRRK
ArrayExpress:F5H0X3 Bgee:F5H0X3 Uniprot:F5H0X3
Length = 1241
Score = 165 (63.1 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 36/94 (38%), Positives = 54/94 (57%)
Query: 313 QILITSPVREDLIHEGGFQYDDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDW 372
Q L T PV D++ + G + D +C VCHR G++LCCE CP V+H +C+ L P+ DW
Sbjct: 98 QPLTTDPV--DVVPQDG-RNDFYCWVCHREGQVLCCELCPRVYHAKCLR--LTSEPEGDW 152
Query: 373 QCNLCKAHKVTGVTDCLPDVEKSGLLCRQEHLGF 406
C C+ K+T V +C+ K+ + E L +
Sbjct: 153 FCPECE--KIT-VAECIETQSKAMTMLTIEQLSY 183
>ZFIN|ZDB-GENE-030131-4532 [details] [associations]
symbol:chd4b "chromodomain helicase DNA binding
protein 4b" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 ZFIN:ZDB-GENE-030131-4532
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:BX511250
IPI:IPI00931161 RefSeq:XP_685699.4 UniGene:Dr.75373
Ensembl:ENSDART00000092902 Ensembl:ENSDART00000148389 GeneID:560622
KEGG:dre:560622 CTD:560622 NextBio:20883532 Uniprot:F1RBT2
Length = 1953
Score = 167 (63.8 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 28/56 (50%), Positives = 37/56 (66%)
Query: 333 DDH----CRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHKVTG 384
DDH CRVC GELLCC+TCP+ +HL C++PPL D+P +W C C + + G
Sbjct: 453 DDHHMEFCRVCKDGGELLCCDTCPSSYHLHCLNPPLPDIPNGEWICPRCLSPPLKG 508
Score = 141 (54.7 bits), Expect = 8.5e-06, P = 8.5e-06
Identities = 20/52 (38%), Positives = 33/52 (63%)
Query: 329 GFQYD--DHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCK 378
G++ D D+C VC + GE++ C+TCP +H+ C+DP + P+ W C C+
Sbjct: 369 GYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMERAPEGTWSCPHCE 420
>UNIPROTKB|Q8TDI0 [details] [associations]
symbol:CHD5 "Chromodomain-helicase-DNA-binding protein 5"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
EMBL:AF425231 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:AL031847
GO:GO:0008026 InterPro:IPR023780 PROSITE:PS00598
HOGENOM:HOG000231124 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 HOVERGEN:HBG005326 OrthoDB:EOG4WH8JX
EMBL:AL035406 EMBL:AL117491 EMBL:AB007913 IPI:IPI00152535
PIR:T17269 RefSeq:NP_056372.1 UniGene:Hs.522898
ProteinModelPortal:Q8TDI0 SMR:Q8TDI0 IntAct:Q8TDI0 STRING:Q8TDI0
PhosphoSite:Q8TDI0 DMDM:51701343 PaxDb:Q8TDI0 PRIDE:Q8TDI0
DNASU:26038 Ensembl:ENST00000262450 GeneID:26038 KEGG:hsa:26038
UCSC:uc001amb.2 CTD:26038 GeneCards:GC01M006096 HGNC:HGNC:16816
HPA:HPA015809 MIM:610771 neXtProt:NX_Q8TDI0 PharmGKB:PA134969178
InParanoid:Q8TDI0 KO:K14435 OMA:KRIDDGD PhylomeDB:Q8TDI0
ChiTaRS:CHD5 GenomeRNAi:26038 NextBio:47863 ArrayExpress:Q8TDI0
Bgee:Q8TDI0 CleanEx:HS_CHD5 Genevestigator:Q8TDI0
GermOnline:ENSG00000116254 Uniprot:Q8TDI0
Length = 1954
Score = 167 (63.8 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 30/68 (44%), Positives = 41/68 (60%)
Query: 322 EDLIHEGGFQY--DDH---CRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNL 376
+D EGG + DDH CRVC GELLCC+ CP+ +HL C++PPL ++P +W C
Sbjct: 400 DDEEEEGGCEEEEDDHMEFCRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPR 459
Query: 377 CKAHKVTG 384
C + G
Sbjct: 460 CTCPPLKG 467
Score = 155 (59.6 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 32/90 (35%), Positives = 48/90 (53%)
Query: 325 IHEG-GFQYD--DHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHK 381
I +G G++ D D+C VC + GE++ C+TCP +HL C+DP L P+ W C C+
Sbjct: 332 IDDGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEG 391
Query: 382 VTGVTDCLPDVEKSGLLCRQE---HLGFDR 408
+ D E+ G C +E H+ F R
Sbjct: 392 IQWEPKDDDDEEEEGG-CEEEEDDHMEFCR 420
>UNIPROTKB|E2RHA0 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1108 KO:K11643 EMBL:AAEX03015287 RefSeq:XP_867754.2
Ensembl:ENSCAFT00000023774 GeneID:477714 KEGG:cfa:477714
Uniprot:E2RHA0
Length = 1912
Score = 167 (63.8 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 322 EDLIHE-GGF--QYDDH----CRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQC 374
E+++ E GG + DDH CRVC GELLCC+TCP+ +H+ C++PPL ++P +W C
Sbjct: 431 EEILEEVGGDPEEEDDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLC 490
Query: 375 NLCKAHKVTG 384
C + G
Sbjct: 491 PRCTCPALKG 500
Score = 144 (55.7 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 21/59 (35%), Positives = 36/59 (61%)
Query: 322 EDLIHEGGFQYD--DHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCK 378
E++ G++ D D+C VC + GE++ C+TCP +H+ C+DP + P+ W C C+
Sbjct: 357 EEVTAVDGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCE 415
Score = 48 (22.0 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 19/74 (25%), Positives = 33/74 (44%)
Query: 7 RRGRPPKTPNTERPKFQVHLLKK---------PQYLQNLEARGLNSPITSRTSSPQGSET 57
++ R PK P ++R K + LL + P++++ E L S +P G +
Sbjct: 58 KKPRDPKIPKSKRQKKERMLLCRQLGDSSGEGPEFVEEEEEVALRSDSEGSDYTP-GKKK 116
Query: 58 SRRSTAKKGTKRKS 71
++ KK K KS
Sbjct: 117 KKKLGPKKEKKSKS 130
>UNIPROTKB|Q14839 [details] [associations]
symbol:CHD4 "Chromodomain-helicase-DNA-binding protein 4"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005813 "centrosome" evidence=IDA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=TAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0001103 "RNA polymerase II repressing
transcription factor binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006357 GO:GO:0006351 GO:GO:0016568
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0004003 InterPro:IPR019786 PROSITE:PS01359
Pathway_Interaction_DB:hdac_classi_pathway InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016581 InterPro:IPR023780 PROSITE:PS00598
HOGENOM:HOG000231124 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 HOVERGEN:HBG005326 EMBL:X86691
EMBL:AC006064 EMBL:BC038596 IPI:IPI00000846 IPI:IPI00455210
RefSeq:NP_001264.2 UniGene:Hs.162233 PDB:1MM2 PDB:1MM3 PDB:2EE1
PDB:2L5U PDB:2L75 PDBsum:1MM2 PDBsum:1MM3 PDBsum:2EE1 PDBsum:2L5U
PDBsum:2L75 ProteinModelPortal:Q14839 SMR:Q14839 DIP:DIP-31183N
IntAct:Q14839 MINT:MINT-349766 STRING:Q14839 PhosphoSite:Q14839
DMDM:311033360 PaxDb:Q14839 PRIDE:Q14839 DNASU:1108
Ensembl:ENST00000309577 Ensembl:ENST00000357008
Ensembl:ENST00000544484 GeneID:1108 KEGG:hsa:1108 UCSC:uc001qpo.3
UCSC:uc001qpp.3 CTD:1108 GeneCards:GC12M006679 H-InvDB:HIX0201859
HGNC:HGNC:1919 HPA:HPA012008 MIM:603277 neXtProt:NX_Q14839
PharmGKB:PA26455 KO:K11643 OMA:ERMLLCR OrthoDB:EOG4WH8JX
ChiTaRS:CHD4 EvolutionaryTrace:Q14839 GenomeRNAi:1108 NextBio:4598
PMAP-CutDB:Q14839 ArrayExpress:Q14839 Bgee:Q14839 CleanEx:HS_CHD4
Genevestigator:Q14839 GermOnline:ENSG00000111642 Uniprot:Q14839
Length = 1912
Score = 167 (63.8 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 322 EDLIHE-GGF--QYDDH----CRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQC 374
E+++ E GG + DDH CRVC GELLCC+TCP+ +H+ C++PPL ++P +W C
Sbjct: 431 EEILEEVGGDLEEEDDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLC 490
Query: 375 NLCKAHKVTG 384
C + G
Sbjct: 491 PRCTCPALKG 500
Score = 144 (55.7 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 21/59 (35%), Positives = 36/59 (61%)
Query: 322 EDLIHEGGFQYD--DHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCK 378
E++ G++ D D+C VC + GE++ C+TCP +H+ C+DP + P+ W C C+
Sbjct: 357 EEVTAVDGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCE 415
Score = 48 (22.0 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 19/74 (25%), Positives = 33/74 (44%)
Query: 7 RRGRPPKTPNTERPKFQVHLLKK---------PQYLQNLEARGLNSPITSRTSSPQGSET 57
++ R PK P ++R K + LL + P++++ E L S +P G +
Sbjct: 58 KKPRDPKIPKSKRQKKERMLLCRQLGDSSGEGPEFVEEEEEVALRSDSEGSDYTP-GKKK 116
Query: 58 SRRSTAKKGTKRKS 71
++ KK K KS
Sbjct: 117 KKKLGPKKEKKSKS 130
>UNIPROTKB|J9NW81 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:ERMLLCR EMBL:AAEX03015287 Ensembl:ENSCAFT00000048002
Uniprot:J9NW81
Length = 1932
Score = 167 (63.8 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 322 EDLIHE-GGF--QYDDH----CRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQC 374
E+++ E GG + DDH CRVC GELLCC+TCP+ +H+ C++PPL ++P +W C
Sbjct: 451 EEILEEVGGDPEEEDDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLC 510
Query: 375 NLCKAHKVTG 384
C + G
Sbjct: 511 PRCTCPALKG 520
Score = 144 (55.7 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 21/59 (35%), Positives = 36/59 (61%)
Query: 322 EDLIHEGGFQYD--DHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCK 378
E++ G++ D D+C VC + GE++ C+TCP +H+ C+DP + P+ W C C+
Sbjct: 377 EEVTAVDGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCE 435
Score = 48 (22.0 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 19/74 (25%), Positives = 33/74 (44%)
Query: 7 RRGRPPKTPNTERPKFQVHLLKK---------PQYLQNLEARGLNSPITSRTSSPQGSET 57
++ R PK P ++R K + LL + P++++ E L S +P G +
Sbjct: 78 KKPRDPKIPKSKRQKKERMLLCRQLGDSSGEGPEFVEEEEEVALRSDSEGSDYTP-GKKK 136
Query: 58 SRRSTAKKGTKRKS 71
++ KK K KS
Sbjct: 137 KKKLGPKKEKKSKS 150
>UNIPROTKB|F1LM59 [details] [associations]
symbol:Chd4 "Protein Chd4" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 RGD:620064 GO:GO:0005524 GO:GO:0005737 GO:GO:0005813
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
IPI:IPI00365698 PRIDE:F1LM59 Ensembl:ENSRNOT00000024864
ArrayExpress:F1LM59 Uniprot:F1LM59
Length = 1945
Score = 167 (63.8 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 322 EDLIHE-GGF--QYDDH----CRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQC 374
E+++ E GG + DDH CRVC GELLCC+TCP+ +H+ C++PPL ++P +W C
Sbjct: 452 EEILEEVGGDPEEEDDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLC 511
Query: 375 NLCKAHKVTG 384
C + G
Sbjct: 512 PRCTCPALKG 521
Score = 144 (55.7 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 21/59 (35%), Positives = 36/59 (61%)
Query: 322 EDLIHEGGFQYD--DHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCK 378
E++ G++ D D+C VC + GE++ C+TCP +H+ C+DP + P+ W C C+
Sbjct: 378 EEVTAVDGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCE 436
Score = 48 (22.0 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 19/74 (25%), Positives = 33/74 (44%)
Query: 7 RRGRPPKTPNTERPKFQVHLLKK---------PQYLQNLEARGLNSPITSRTSSPQGSET 57
++ R PK P ++R K + LL + P++++ E L S +P G +
Sbjct: 79 KKPRDPKIPKSKRQKKERLLLCRQLGDSSGEGPEFVEEDEEAALRSDSEGSDYTP-GKKK 137
Query: 58 SRRSTAKKGTKRKS 71
++ KK K KS
Sbjct: 138 KKKLGPKKEKKSKS 151
>ZFIN|ZDB-GENE-041119-1 [details] [associations]
symbol:zmynd8 "zinc finger, MYND-type containing 8"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR002893
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF01753
PRINTS:PR00503 PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50865 SMART:SM00249 SMART:SM00297 Pfam:PF00855
ZFIN:ZDB-GENE-041119-1 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.20.920.10 SUPFAM:SSF47370 InterPro:IPR000313
PROSITE:PS50812 InterPro:IPR021931 Pfam:PF12064
GeneTree:ENSGT00530000063428 EMBL:BX296530 IPI:IPI00512740
Ensembl:ENSDART00000040235 Bgee:E7FBQ3 Uniprot:E7FBQ3
Length = 1201
Score = 164 (62.8 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 35/98 (35%), Positives = 55/98 (56%)
Query: 309 FLTDQILITSPVREDLIHEGGFQYDDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVP 368
++ L T PV D++ + G + D +C VCHR G++LCCE CP V+H +C+ L P
Sbjct: 88 YVKQPALTTDPV--DVVPQDG-RNDFYCWVCHREGQVLCCELCPRVYHAKCLK--LAAEP 142
Query: 369 QEDWQCNLCKAHKVTGVTDCLPDVEKSGLLCRQEHLGF 406
+ DW C C+ K+T V +C+ K+ + + L F
Sbjct: 143 EGDWFCPECE--KIT-VAECIETQSKAMTMLTLDQLSF 177
>UNIPROTKB|F1SLR5 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1108 KO:K11643 OMA:ERMLLCR EMBL:CU914489 EMBL:GACC01000070
RefSeq:XP_003126577.3 UniGene:Ssc.25044 Ensembl:ENSSSCT00000000759
GeneID:100515610 KEGG:ssc:100515610 Uniprot:F1SLR5
Length = 1912
Score = 167 (63.8 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 322 EDLIHE-GGF--QYDDH----CRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQC 374
E+++ E GG + DDH CRVC GELLCC+TCP+ +H+ C++PPL ++P +W C
Sbjct: 431 EEILEEVGGDPEEEDDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLC 490
Query: 375 NLCKAHKVTG 384
C + G
Sbjct: 491 PRCTCPALKG 500
Score = 144 (55.7 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 21/59 (35%), Positives = 36/59 (61%)
Query: 322 EDLIHEGGFQYD--DHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCK 378
E++ G++ D D+C VC + GE++ C+TCP +H+ C+DP + P+ W C C+
Sbjct: 357 EEVTAVDGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCE 415
Score = 47 (21.6 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 19/74 (25%), Positives = 33/74 (44%)
Query: 7 RRGRPPKTPNTERPKFQVHLLKK---------PQYLQNLEARGLNSPITSRTSSPQGSET 57
++ R PK P ++R K + LL + P++++ E L S +P G +
Sbjct: 58 KKPRDPKIPKSKRQKKERVLLCRQLGDSSGEGPEFVEEEEEVALRSDSEGSDYTP-GKKK 116
Query: 58 SRRSTAKKGTKRKS 71
++ KK K KS
Sbjct: 117 KKKLGPKKEKKSKS 130
>UNIPROTKB|F1N3F6 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:ERMLLCR EMBL:DAAA02014463 IPI:IPI00877578
Ensembl:ENSBTAT00000019612 ArrayExpress:F1N3F6 Uniprot:F1N3F6
Length = 1934
Score = 167 (63.8 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 322 EDLIHE-GGF--QYDDH----CRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQC 374
E+++ E GG + DDH CRVC GELLCC+TCP+ +H+ C++PPL ++P +W C
Sbjct: 453 EEILEEVGGDPEEEDDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLC 512
Query: 375 NLCKAHKVTG 384
C + G
Sbjct: 513 PRCTCPALKG 522
Score = 144 (55.7 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 21/59 (35%), Positives = 36/59 (61%)
Query: 322 EDLIHEGGFQYD--DHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCK 378
E++ G++ D D+C VC + GE++ C+TCP +H+ C+DP + P+ W C C+
Sbjct: 379 EEVTAVDGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCE 437
Score = 47 (21.6 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 19/74 (25%), Positives = 33/74 (44%)
Query: 7 RRGRPPKTPNTERPKFQVHLLKK---------PQYLQNLEARGLNSPITSRTSSPQGSET 57
++ R PK P ++R K + LL + P++++ E L S +P G +
Sbjct: 78 KKPRDPKIPKSKRQKKERLLLCRQLGDSSGEGPEFVEEEEEVALRSDSEGSDYTP-GKKK 136
Query: 58 SRRSTAKKGTKRKS 71
++ KK K KS
Sbjct: 137 KKKLGPKKEKKSKS 150
>UNIPROTKB|F1MFF9 [details] [associations]
symbol:Bt.62145 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:KRIDDGD EMBL:DAAA02043090 IPI:IPI00688794
Ensembl:ENSBTAT00000010688 Uniprot:F1MFF9
Length = 1852
Score = 165 (63.1 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 29/63 (46%), Positives = 39/63 (61%)
Query: 327 EGGFQY--DDH---CRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHK 381
EGG + DDH CRVC GELLCC+ CP+ +HL C++PPL ++P +W C C
Sbjct: 350 EGGCEEEEDDHMEFCRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCTCPP 409
Query: 382 VTG 384
+ G
Sbjct: 410 LKG 412
Score = 154 (59.3 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 32/96 (33%), Positives = 47/96 (48%)
Query: 318 SPVREDLIHEGGFQYD--DHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCN 375
SP + G++ D D+C VC + GE++ C+TCP +HL C+DP L P+ W C
Sbjct: 271 SPAHSPVDDGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCP 330
Query: 376 LCKAHKVTGVTDCLPDVEKSGLLCRQE---HLGFDR 408
C+ + D E G C +E H+ F R
Sbjct: 331 HCEKEGIQWEPKDDDDDEDEGG-CEEEEDDHMEFCR 365
>RGD|1582725 [details] [associations]
symbol:Chd5 "chromodomain helicase DNA binding protein 5"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1582725 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 OrthoDB:EOG4WH8JX
IPI:IPI00948282 Ensembl:ENSRNOT00000067364 UCSC:RGD:1582725
ArrayExpress:D4A5U0 Uniprot:D4A5U0
Length = 1940
Score = 165 (63.1 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 29/63 (46%), Positives = 39/63 (61%)
Query: 327 EGGFQY--DDH---CRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHK 381
EGG + DDH CRVC GELLCC+ CP+ +HL C++PPL ++P +W C C
Sbjct: 403 EGGCEEEEDDHMEFCRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCTCPP 462
Query: 382 VTG 384
+ G
Sbjct: 463 LKG 465
Score = 151 (58.2 bits), Expect = 6.8e-07, P = 6.8e-07
Identities = 31/90 (34%), Positives = 48/90 (53%)
Query: 325 IHEG-GFQYD--DHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHK 381
I +G G++ D D+C VC + GE++ C+TCP +HL C+DP L P+ W C C+
Sbjct: 330 IDDGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEG 389
Query: 382 VTGVTDCLPDVEKSGLLCRQE---HLGFDR 408
+ + E+ G C +E H+ F R
Sbjct: 390 IQWEPKDDDEEEEEGG-CEEEEDDHMEFCR 418
>UNIPROTKB|F1NX82 [details] [associations]
symbol:PHF21B "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 OMA:SDKQALG
GeneTree:ENSGT00530000063984 EMBL:AADN02006727 IPI:IPI00584515
Ensembl:ENSGALT00000022994 Uniprot:F1NX82
Length = 447
Score = 157 (60.3 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 31/89 (34%), Positives = 46/89 (51%)
Query: 302 KRLRVLQFLTDQILITSPVREDLIHEGGFQYDDHCRVCHRVGELLCCETCPAVFHLECVD 361
KRL FL + + +++ ED + +D++C C R L C TCP +HL C+D
Sbjct: 236 KRL-ASNFLNNPLFLSTRANEDPFWKNEIHHDEYCTACKRGVNLQPCGTCPRAYHLNCLD 294
Query: 362 PPLRDVPQEDWQCNLCKAHKVTGVTDCLP 390
PPL+ P+ W C C+ KV D +P
Sbjct: 295 PPLKTAPKGVWVCPKCQ-QKVLKKDDNVP 322
>FB|FBgn0023395 [details] [associations]
symbol:Chd3 "Chd3" species:7227 "Drosophila melanogaster"
[GO:0006333 "chromatin assembly or disassembly" evidence=ISS;NAS]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0004386 "helicase
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 EMBL:AE014296 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006351 GO:GO:0006333
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0004386 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 PROSITE:PS00598 GeneTree:ENSGT00560000076896
InterPro:IPR009463 Pfam:PF06465 EMBL:AY071503 EMBL:AF007780
RefSeq:NP_649111.1 ProteinModelPortal:O16102 SMR:O16102
DIP:DIP-21327N MINT:MINT-1651376 STRING:O16102 PaxDb:O16102
EnsemblMetazoa:FBtr0074998 GeneID:40111 KEGG:dme:Dmel_CG9594
UCSC:CG9594-RA CTD:1107 FlyBase:FBgn0023395 InParanoid:O16102
OMA:IKWRDLA OrthoDB:EOG4JH9WN PhylomeDB:O16102 GenomeRNAi:40111
NextBio:817050 Bgee:O16102 GermOnline:CG9594 Uniprot:O16102
Length = 892
Score = 161 (61.7 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 22/48 (45%), Positives = 36/48 (75%)
Query: 330 FQYDDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLC 377
F+ +++C+VC G+LLCC++CP+V+H C+ PPL+ +P+ DW C C
Sbjct: 32 FRDEEYCKVCSDGGDLLCCDSCPSVYHRTCLSPPLKSIPKGDWICPRC 79
>ZFIN|ZDB-GENE-040724-145 [details] [associations]
symbol:trim66 "tripartite motif containing 66"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF00643
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50119 SMART:SM00249
SMART:SM00297 SMART:SM00336 SMART:SM00502 ZFIN:ZDB-GENE-040724-145
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.20.920.10
SUPFAM:SSF47370 GeneTree:ENSGT00530000062982 EMBL:BX323591
IPI:IPI00516161 Ensembl:ENSDART00000076510 Uniprot:F1QYE4
Length = 1119
Score = 161 (61.7 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 40/114 (35%), Positives = 56/114 (49%)
Query: 269 PEALRSY--IESDKTFDEEV-LNILNTCEYPFTN-IEKRLRVLQFLTDQILITSPVREDL 324
PE++ S +ESD EV LN+ CE+ + + + + + ++ P E
Sbjct: 839 PESVLSEQEMESDPDSTAEVNLNLEPECEWETEQPVSPQSSGFENVPEPVVEHQPSEESP 898
Query: 325 IHEGGFQYDDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCK 378
E +D C VC G+LLCC+ CP VFHL C PPL P DW C LC+
Sbjct: 899 EIEN----EDFCAVCLIGGDLLCCDRCPKVFHLSCHVPPLHSFPVGDWICTLCR 948
>UNIPROTKB|H7C4X9 [details] [associations]
symbol:ZMYND8 "Protein kinase C-binding protein 1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR002893 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF01753 PRINTS:PR00503 PROSITE:PS01360 PROSITE:PS50014
PROSITE:PS50016 PROSITE:PS50865 SMART:SM00249 SMART:SM00297
Pfam:PF00855 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.20.920.10
SUPFAM:SSF47370 InterPro:IPR000313 PROSITE:PS50812 EMBL:AL049540
EMBL:AL031666 HGNC:HGNC:9397 InterPro:IPR021931 Pfam:PF12064
EMBL:AL390212 ProteinModelPortal:H7C4X9 PRIDE:H7C4X9
Ensembl:ENST00000467200 Uniprot:H7C4X9
Length = 1096
Score = 160 (61.4 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 34/90 (37%), Positives = 52/90 (57%)
Query: 317 TSPVREDLIHEGGFQYDDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNL 376
T PV D++ + G + D +C VCHR G++LCCE CP V+H +C+ L P+ DW C
Sbjct: 2 TDPV--DVVPQDG-RNDFYCWVCHREGQVLCCELCPRVYHAKCLR--LTSEPEGDWFCPE 56
Query: 377 CKAHKVTGVTDCLPDVEKSGLLCRQEHLGF 406
C+ K+T V +C+ K+ + E L +
Sbjct: 57 CE--KIT-VAECIETQSKAMTMLTIEQLSY 83
>UNIPROTKB|K7EQP5 [details] [associations]
symbol:PHF12 "PHD finger protein 12" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 EMBL:AC024267 HGNC:HGNC:20816
Ensembl:ENST00000583747 Uniprot:K7EQP5
Length = 117
Score = 133 (51.9 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 21/43 (48%), Positives = 28/43 (65%)
Query: 334 DHCRVCHRVGELLCCETCPAVFHLECVDPPLRD--VPQEDWQC 374
D C C G+LLCC+ CPA FHL+C +PPL + +P +W C
Sbjct: 75 DSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMC 117
>UNIPROTKB|F1NH79 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
SMART:SM00249 SMART:SM00298 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
EMBL:AADN02061139 EMBL:AADN02061140 EMBL:AADN02061141
EMBL:AADN02061142 EMBL:AADN02061143 IPI:IPI00598956
Ensembl:ENSGALT00000023339 OMA:DGEHEHQ Uniprot:F1NH79
Length = 1895
Score = 162 (62.1 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 26/68 (38%), Positives = 41/68 (60%)
Query: 320 VREDLIHEGGFQYDDH---CRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNL 376
+ ED++ + + D H CRVC GELLCC+ CP+ +H+ C++PPL ++P +W C
Sbjct: 403 ILEDVVGDAEEEDDHHMEFCRVCKDGGELLCCDACPSSYHIHCLNPPLPEIPNGEWLCPR 462
Query: 377 CKAHKVTG 384
C + G
Sbjct: 463 CTCPALKG 470
Score = 142 (55.0 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 20/52 (38%), Positives = 33/52 (63%)
Query: 329 GFQYD--DHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCK 378
G++ D D+C VC + GE++ C+TCP +H+ C+DP + P+ W C C+
Sbjct: 334 GYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCE 385
>FB|FBgn0262519 [details] [associations]
symbol:Mi-2 species:7227 "Drosophila melanogaster"
[GO:0016887 "ATPase activity" evidence=IDA;NAS] [GO:0005634
"nucleus" evidence=ISS;IDA;NAS] [GO:0004003 "ATP-dependent DNA
helicase activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=ISS] [GO:0016581 "NuRD complex" evidence=ISS;TAS]
[GO:0006333 "chromatin assembly or disassembly" evidence=ISS]
[GO:0003682 "chromatin binding" evidence=ISS;IDA] [GO:0003678 "DNA
helicase activity" evidence=ISS] [GO:0005700 "polytene chromosome"
evidence=IDA] [GO:0042766 "nucleosome mobilization" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0007517 "muscle
organ development" evidence=IMP] [GO:0048813 "dendrite
morphogenesis" evidence=IMP] [GO:0031491 "nucleosome binding"
evidence=IDA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0070615
"nucleosome-dependent ATPase activity" evidence=IDA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 EMBL:AE014296 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006351 GO:GO:0000122
GO:GO:0048813 GO:GO:0007517 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0004003 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0005700 GO:GO:0042766 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0016581 InterPro:IPR023780
PROSITE:PS00598 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 KO:K11643
EMBL:AF119716 EMBL:AY113368 RefSeq:NP_001163476.1
RefSeq:NP_649154.2 UniGene:Dm.28317 ProteinModelPortal:O97159
SMR:O97159 DIP:DIP-22862N IntAct:O97159 MINT:MINT-864813
STRING:O97159 PaxDb:O97159 EnsemblMetazoa:FBtr0074919
EnsemblMetazoa:FBtr0302046 GeneID:40170 KEGG:dme:Dmel_CG8103
CTD:40170 FlyBase:FBgn0262519 InParanoid:O97159 OrthoDB:EOG4T76J4
ChiTaRS:Mi-2 GenomeRNAi:40170 NextBio:817384 Bgee:O97159
GermOnline:CG8103 Uniprot:O97159
Length = 1982
Score = 165 (63.1 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 24/54 (44%), Positives = 36/54 (66%)
Query: 331 QYDDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHKVTG 384
++ + CRVC GELLCC++CP+ +H C++PPL +P DW+C C +TG
Sbjct: 435 EHQEFCRVCKDGGELLCCDSCPSAYHTFCLNPPLDTIPDGDWRCPRCSCPPLTG 488
Score = 150 (57.9 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 21/53 (39%), Positives = 35/53 (66%)
Query: 327 EGGFQYDDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKA 379
+G ++ D+C VC + GE++ C+TCP +HL C++P L + P+ W C C+A
Sbjct: 371 DGEHEHQDYCEVCQQGGEIILCDTCPRAYHLVCLEPELDEPPEGKWSCPHCEA 423
Score = 45 (20.9 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 13/37 (35%), Positives = 17/37 (45%)
Query: 56 ETSRRSTAKKGTKRKSNPPTXXXXXXNQKRKQTLETD 92
E SRR KKG KRK+ +++K E D
Sbjct: 48 EDSRRK--KKGKKRKTRKGEEKGRKKKKRKKNESEED 82
Score = 38 (18.4 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 56 ETSRRSTAKKGTKRK 70
E ST+K+G KRK
Sbjct: 91 EVEYPSTSKRGRKRK 105
>UNIPROTKB|E1BIC4 [details] [associations]
symbol:AIRE "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0042802 "identical
protein binding" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006959 "humoral
immune response" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0045182 "translation regulator activity"
evidence=IEA] InterPro:IPR000770 InterPro:IPR001965
InterPro:IPR004865 InterPro:IPR008087 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01342 Pfam:PF03172 PRINTS:PR01711
PROSITE:PS50016 PROSITE:PS50864 PROSITE:PS51414 SMART:SM00249
SMART:SM00258 GO:GO:0005886 GO:GO:0005634 GO:GO:0005737
GO:GO:0006417 GO:GO:0046872 GO:GO:0015629 GO:GO:0008270
GO:GO:0045944 GO:GO:0003682 GO:GO:0045182 GO:GO:0044212
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 OMA:NDDECAV
GO:GO:0006959 Gene3D:3.10.390.10 InterPro:IPR010919 SUPFAM:SSF63763
GeneTree:ENSGT00440000034278 EMBL:DAAA02003438 EMBL:DAAA02003439
IPI:IPI00693894 Ensembl:ENSBTAT00000031852 Uniprot:E1BIC4
Length = 561
Score = 155 (59.6 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 27/62 (43%), Positives = 35/62 (56%)
Query: 333 DDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHKVTGVTDCLPDV 392
+D C C GELLCC+ CP FHL C+ PPL ++P W+C+ C T D LP
Sbjct: 304 EDECAACRDGGELLCCDGCPRAFHLACLTPPLSEIPSGTWRCSNC-VQGTTAQRD-LPRA 361
Query: 393 EK 394
E+
Sbjct: 362 EQ 363
>UNIPROTKB|F1SNJ6 [details] [associations]
symbol:LOC100620590 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0004672 "protein kinase activity" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0002039 "p53
binding" evidence=IEA] [GO:0071391 "cellular response to estrogen
stimulus" evidence=IEA] [GO:0070577 "histone acetyl-lysine binding"
evidence=IEA] [GO:0070562 "regulation of vitamin D receptor
signaling pathway" evidence=IEA] [GO:0055074 "calcium ion
homeostasis" evidence=IEA] [GO:0046777 "protein
autophosphorylation" evidence=IEA] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0042981 "regulation of apoptotic process" evidence=IEA]
[GO:0034056 "estrogen response element binding" evidence=IEA]
[GO:0031647 "regulation of protein stability" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0016922
"ligand-dependent nuclear receptor binding" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005726 "perichromatin
fibrils" evidence=IEA] [GO:0005719 "nuclear euchromatin"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 SMART:SM00249 SMART:SM00297
GO:GO:0005737 GO:GO:0045892 GO:GO:0045893 GO:GO:0008285
GO:GO:0042981 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0046777 GO:GO:0003682 GO:GO:0004672 GO:GO:0031647
GO:GO:0030163 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0005719 GO:GO:0004842 GO:GO:0055074
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0071391 GO:GO:0034056 GO:GO:0070562
GO:GO:0005726 EMBL:FP236752 Ensembl:ENSSSCT00000017986
Uniprot:F1SNJ6
Length = 301
Score = 149 (57.5 bits), Expect = 6.4e-08, P = 6.4e-08
Identities = 24/46 (52%), Positives = 28/46 (60%)
Query: 333 DDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCK 378
+D C VC GELLCCE CP VFHL C P L + P +W C C+
Sbjct: 77 EDWCAVCQNGGELLCCEKCPKVFHLSCHVPTLANFPSGEWICTFCR 122
>UNIPROTKB|D4A9U0 [details] [associations]
symbol:Phf21b "PHD finger protein 21B (Predicted)"
species:10116 "Rattus norvegicus" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628
PROSITE:PS50016 SMART:SM00249 RGD:1308739 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 EMBL:CH473950 CTD:112885
OrthoDB:EOG4P2Q2F GeneTree:ENSGT00530000063984 IPI:IPI00361455
RefSeq:NP_001124152.1 UniGene:Rn.198794 Ensembl:ENSRNOT00000017906
GeneID:300117 KEGG:rno:300117 NextBio:646365 Uniprot:D4A9U0
Length = 494
Score = 153 (58.9 bits), Expect = 7.6e-08, Sum P(2) = 7.6e-08
Identities = 38/144 (26%), Positives = 64/144 (44%)
Query: 239 EEDTQQTHFGPLDQ---KDSANSVLYFID-AMTWPEALRSYIESDKTFDEEVLNILNTCE 294
EE +Q DQ K++ + + + + E L I+S K + + + N
Sbjct: 211 EEPSQGAQDTKEDQPPSKENPEKIAFMVALGLVTTEHLEE-IQS-KRQERKRRSTANPAY 268
Query: 295 YPFTNIEKRLRVLQFLTDQILITSPVREDLIHEGGFQYDDHCRVCHRVGELLCCETCPAV 354
F E++ +L + + +T+ ED +G +D+ C C R L C TC
Sbjct: 269 SGFLETERKRLASSYLHNPLFLTARANEDPCWKGEITHDEFCAACKRGASLQPCGTCSGA 328
Query: 355 FHLECVDPPLRDVPQEDWQCNLCK 378
+HL C+DPPL+ P+ W C C+
Sbjct: 329 YHLSCLDPPLKTAPKGVWVCPKCQ 352
Score = 41 (19.5 bits), Expect = 7.6e-08, Sum P(2) = 7.6e-08
Identities = 11/23 (47%), Positives = 13/23 (56%)
Query: 8 RGRPPKTPNTERPKFQVHLLKKP 30
R RPPK P T + K V +K P
Sbjct: 88 RDRPPKQPPTFQ-KATVVSIKNP 109
>UNIPROTKB|D5LMF5 [details] [associations]
symbol:zmynd8 "Zinc finger and MYND domain containing
protein 8" species:8355 "Xenopus laevis" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0007399 "nervous system development"
evidence=IMP] [GO:0070491 "repressing transcription factor binding"
evidence=IPI] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR002893 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF01753 PRINTS:PR00503 PROSITE:PS01360 PROSITE:PS50014
PROSITE:PS50016 PROSITE:PS50865 SMART:SM00249 SMART:SM00297
Pfam:PF00855 GO:GO:0005634 GO:GO:0007399 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0001106 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 CTD:23613 InterPro:IPR021931
Pfam:PF12064 EMBL:GU942747 RefSeq:NP_001170911.1 UniGene:Xl.18946
GeneID:733267 KEGG:xla:733267 Xenbase:XB-GENE-6253445
Uniprot:D5LMF5
Length = 1165
Score = 164 (62.8 bits), Expect = 7.7e-08, Sum P(2) = 7.7e-08
Identities = 36/94 (38%), Positives = 54/94 (57%)
Query: 313 QILITSPVREDLIHEGGFQYDDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDW 372
Q L T PV D++ + G + D +C VCHR G++LCCE CP V+H +C+ L P+ DW
Sbjct: 111 QPLTTDPV--DVVPQDG-RNDFYCWVCHREGQVLCCELCPRVYHAKCLK--LTAEPEGDW 165
Query: 373 QCNLCKAHKVTGVTDCLPDVEKSGLLCRQEHLGF 406
C C+ K+T V +C+ K+ + E L +
Sbjct: 166 FCPECE--KIT-VAECIETQSKAMTMLTIEQLSY 196
Score = 39 (18.8 bits), Expect = 7.7e-08, Sum P(2) = 7.7e-08
Identities = 14/37 (37%), Positives = 16/37 (43%)
Query: 37 EARGLNSPI-TSRTSSPQGSETSRRSTAKKGTKRKSN 72
+ R SP +S SPQ S TS KK SN
Sbjct: 58 QKRRFPSPQHSSNGHSPQDSSTSPSKKKKKPIMINSN 94
>DICTYBASE|DDB_G0277341 [details] [associations]
symbol:DDB_G0277341 "PHD zinc finger-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628
PROSITE:PS50016 SMART:SM00249 dictyBase:DDB_G0277341 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 EMBL:AAFI02000019 eggNOG:NOG145066
RefSeq:XP_642746.2 ProteinModelPortal:Q86K47 SMR:Q86K47
EnsemblProtists:DDB0219998 GeneID:8620936 KEGG:ddi:DDB_G0277341
InParanoid:Q86K47 OMA:ASMPSEF Uniprot:Q86K47
Length = 914
Score = 156 (60.0 bits), Expect = 7.8e-08, P = 7.8e-08
Identities = 26/61 (42%), Positives = 38/61 (62%)
Query: 321 REDLIHEGGFQYDDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAH 380
+ +L ++ G DD+C C G+LLCC+ C A FHL C++PPL ++P DW C+ C
Sbjct: 49 KTNLKNKRGVINDDYCSGCGDGGDLLCCDNCQASFHLICLNPPLNEIPSGDWFCDSCTYK 108
Query: 381 K 381
K
Sbjct: 109 K 109
>UNIPROTKB|K7EJ43 [details] [associations]
symbol:PHF12 "PHD finger protein 12" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 EMBL:AC024267 HGNC:HGNC:20816
Ensembl:ENST00000584685 Uniprot:K7EJ43
Length = 215
Score = 142 (55.0 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 334 DHCRVCHRVGELLCCETCPAVFHLECVDPPLRD--VPQEDWQCNLCKAHK 381
D C C G+LLCC+ CPA FHL+C +PPL + +P +W C+ C +
Sbjct: 81 DSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCTVRR 130
>ZFIN|ZDB-GENE-030131-6456 [details] [associations]
symbol:phf21ab "PHD finger protein 21Ab"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0060324
"face development" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR017956 InterPro:IPR019787 Pfam:PF00628 Pfam:PF02178
PROSITE:PS50016 SMART:SM00184 SMART:SM00249 SMART:SM00384
ZFIN:ZDB-GENE-030131-6456 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0060324
GeneTree:ENSGT00530000063984 EMBL:BX088562 IPI:IPI00499307
UniGene:Dr.80349 Ensembl:ENSDART00000021577 NextBio:20885937
Bgee:E7F750 Uniprot:E7F750
Length = 796
Score = 158 (60.7 bits), Expect = 8.5e-08, Sum P(2) = 8.5e-08
Identities = 23/47 (48%), Positives = 35/47 (74%)
Query: 332 YDDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCK 378
++D C VC R G+LL C+TC V+HL+C+DPPL+++P+ W C C+
Sbjct: 460 HEDFCTVCRRSGQLLMCDTCSRVYHLDCLDPPLKNIPKGMWICPKCQ 506
Score = 41 (19.5 bits), Expect = 8.5e-08, Sum P(2) = 8.5e-08
Identities = 7/12 (58%), Positives = 9/12 (75%)
Query: 6 KRRGRPPKTPNT 17
++RGRPPK T
Sbjct: 387 RKRGRPPKYSTT 398
Score = 39 (18.8 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 14/53 (26%), Positives = 22/53 (41%)
Query: 11 PPKTPNTERPKFQVHLLKKPQYLQNLEARGLNSPITSRTSSPQGSETSRRSTA 63
P +P P +V + PQ L + + GL + + E RR+TA
Sbjct: 305 PSSSPPLPPPPAKVKREESPQKLAFMVSLGLVTHDHLEEIQSRRQERKRRTTA 357
>RGD|1308739 [details] [associations]
symbol:Phf21b "PHD finger protein 21B" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 RGD:1308739 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 OMA:SDKQALG IPI:IPI00566233
Ensembl:ENSRNOT00000046327 Uniprot:F1LTZ7
Length = 512
Score = 153 (58.9 bits), Expect = 8.6e-08, Sum P(2) = 8.6e-08
Identities = 38/144 (26%), Positives = 64/144 (44%)
Query: 239 EEDTQQTHFGPLDQ---KDSANSVLYFID-AMTWPEALRSYIESDKTFDEEVLNILNTCE 294
EE +Q DQ K++ + + + + E L I+S K + + + N
Sbjct: 229 EEPSQGAQDTKEDQPPSKENPEKIAFMVALGLVTTEHLEE-IQS-KRQERKRRSTANPAY 286
Query: 295 YPFTNIEKRLRVLQFLTDQILITSPVREDLIHEGGFQYDDHCRVCHRVGELLCCETCPAV 354
F E++ +L + + +T+ ED +G +D+ C C R L C TC
Sbjct: 287 SGFLETERKRLASSYLHNPLFLTARANEDPCWKGEITHDEFCAACKRGASLQPCGTCSGA 346
Query: 355 FHLECVDPPLRDVPQEDWQCNLCK 378
+HL C+DPPL+ P+ W C C+
Sbjct: 347 YHLSCLDPPLKTAPKGVWVCPKCQ 370
Score = 41 (19.5 bits), Expect = 8.6e-08, Sum P(2) = 8.6e-08
Identities = 11/23 (47%), Positives = 13/23 (56%)
Query: 8 RGRPPKTPNTERPKFQVHLLKKP 30
R RPPK P T + K V +K P
Sbjct: 106 RDRPPKQPPTFQ-KATVVSIKNP 127
>UNIPROTKB|F1NMG7 [details] [associations]
symbol:F1NMG7 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0045182 "translation regulator activity"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006959 "humoral immune response" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0015629 "actin cytoskeleton"
evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR001965
InterPro:IPR004865 InterPro:IPR008087 InterPro:IPR019787
Pfam:PF00628 Pfam:PF03172 PRINTS:PR01711 PROSITE:PS50016
PROSITE:PS51414 SMART:SM00249 GO:GO:0005886 GO:GO:0005634
GO:GO:0005737 GO:GO:0006417 GO:GO:0046872 GO:GO:0015629
GO:GO:0008270 GO:GO:0045944 GO:GO:0003682 GO:GO:0045182
GO:GO:0044212 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 OMA:NDDECAV GO:GO:0006959
GeneTree:ENSGT00440000034278 EMBL:AADN02024441 EMBL:AADN02024442
IPI:IPI00575755 Ensembl:ENSGALT00000002020 ArrayExpress:F1NMG7
Uniprot:F1NMG7
Length = 584
Score = 153 (58.9 bits), Expect = 8.9e-08, P = 8.9e-08
Identities = 25/47 (53%), Positives = 30/47 (63%)
Query: 333 DDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKA 379
+D C VC GEL+CC+ CP FHL C+ PPL VP WQC+ C A
Sbjct: 456 EDECAVCGDGGELICCDGCPRAFHLPCLVPPLPRVPSGTWQCSSCVA 502
Score = 131 (51.2 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 25/58 (43%), Positives = 29/58 (50%)
Query: 333 DDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQED----WQCNLCKAHKVTGVT 386
+D C VC GEL+CC+ CP FHL C+ PPL VP W C H G T
Sbjct: 301 EDECAVCGDGGELICCDGCPRAFHLPCLVPPLPRVPSPATAPLWNCTHTAHHSTDGRT 358
>UNIPROTKB|I3LDB0 [details] [associations]
symbol:I3LDB0 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003682 "chromatin binding" evidence=IEA] [GO:0001967
"suckling behavior" evidence=IEA] [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000118 "histone deacetylase complex" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR017956 InterPro:IPR019787 Pfam:PF00628 Pfam:PF02178
PROSITE:PS50016 SMART:SM00184 SMART:SM00249 SMART:SM00384
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 OMA:SCTVNCN
GeneTree:ENSGT00530000063984 EMBL:FP101987
Ensembl:ENSSSCT00000023373 Uniprot:I3LDB0
Length = 563
Score = 153 (58.9 bits), Expect = 9.1e-08, Sum P(2) = 9.1e-08
Identities = 22/47 (46%), Positives = 34/47 (72%)
Query: 332 YDDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCK 378
++D C VC + G+LL C+TC V+HL+C+DPPL+ +P+ W C C+
Sbjct: 367 HEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQ 413
Score = 42 (19.8 bits), Expect = 9.1e-08, Sum P(2) = 9.1e-08
Identities = 18/77 (23%), Positives = 34/77 (44%)
Query: 10 RPPKTPNTERPKFQVHL-LKKPQYLQNLEA-------RGLNSPITS-RTSSPQGSE---T 57
+P + N ++ F V L L +L+ +++ R +P+ S P+ + T
Sbjct: 236 KPKREENPQKLAFMVSLGLVTHDHLEEIQSKRQERKRRTTANPVYSGAVFEPERKKSAVT 295
Query: 58 SRRSTAKKGTKRKSNPP 74
ST GT+++ PP
Sbjct: 296 YLNSTMHPGTRKRGRPP 312
Score = 41 (19.5 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 1 MYGRIKRRGRPPK 13
M+ ++RGRPPK
Sbjct: 301 MHPGTRKRGRPPK 313
>FB|FBgn0029861 [details] [associations]
symbol:CG3815 species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0070822 "Sin3-type complex" evidence=IDA]
InterPro:IPR000253 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50006 PROSITE:PS50016 SMART:SM00249
GO:GO:0046872 EMBL:AE014298 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0070822 HSSP:Q14839
eggNOG:NOG145066 GeneTree:ENSGT00440000033777 EMBL:AY069054
RefSeq:NP_572311.1 UniGene:Dm.2312 SMR:Q9W410 IntAct:Q9W410
MINT:MINT-921456 STRING:Q9W410 EnsemblMetazoa:FBtr0070899
GeneID:31571 KEGG:dme:Dmel_CG3815 UCSC:CG3815-RA
FlyBase:FBgn0029861 InParanoid:Q9W410 OMA:SEFGTEV OrthoDB:EOG45HQC9
GenomeRNAi:31571 NextBio:774240 Uniprot:Q9W410
Length = 878
Score = 155 (59.6 bits), Expect = 9.5e-08, P = 9.5e-08
Identities = 24/52 (46%), Positives = 33/52 (63%)
Query: 334 DHCRVCHRVGELLCCETCPAVFHLECVDPPL--RDVPQEDWQCNLCKAHKVT 383
D+C C G LLCC+ CP+ FHL+C DPPL D+P W C+ C+ K++
Sbjct: 54 DYCDACEEGGNLLCCDRCPSSFHLQCHDPPLSEEDIPSGQWLCHSCRMSKLS 105
>UNIPROTKB|H7C2H0 [details] [associations]
symbol:CHD3 "Chromodomain-helicase-DNA-binding protein 3"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001841
InterPro:IPR009071 InterPro:IPR000953 InterPro:IPR001965
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00628 Pfam:PF08073
PROSITE:PS50013 PROSITE:PS50016 SMART:SM00184 SMART:SM00249
SMART:SM00298 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR023780 HGNC:HGNC:1918 ChiTaRS:CHD3 EMBL:AC104581
GO:GO:0016818 Ensembl:ENST00000452447 Uniprot:H7C2H0
Length = 525
Score = 152 (58.6 bits), Expect = 9.6e-08, P = 9.6e-08
Identities = 25/55 (45%), Positives = 34/55 (61%)
Query: 333 DDH---CRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHKVTG 384
DDH CRVC GELLCC+ C + +H+ C++PPL D+P +W C C + G
Sbjct: 324 DDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCTCPVLKG 378
Score = 144 (55.7 bits), Expect = 7.5e-07, P = 7.5e-07
Identities = 23/56 (41%), Positives = 34/56 (60%)
Query: 329 GFQYD--DHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHKV 382
G++ D D+C VC + GE++ C+TCP +HL C+DP L P+ W C C+ V
Sbjct: 244 GYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGV 299
>UNIPROTKB|F1M0S9 [details] [associations]
symbol:Zmynd8 "Protein Zmynd8" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR002893
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF01753
PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50865
SMART:SM00249 SMART:SM00297 Pfam:PF00855 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 InterPro:IPR021931 Pfam:PF12064
RGD:1309544 IPI:IPI00949507 Ensembl:ENSRNOT00000065165
ArrayExpress:F1M0S9 Uniprot:F1M0S9
Length = 1226
Score = 165 (63.1 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 36/94 (38%), Positives = 54/94 (57%)
Query: 313 QILITSPVREDLIHEGGFQYDDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDW 372
Q L T PV D++ + G + D +C VCHR G++LCCE CP V+H +C+ L P+ DW
Sbjct: 68 QPLTTDPV--DVVPQDG-RNDFYCWVCHREGQVLCCELCPRVYHAKCLR--LTSEPEGDW 122
Query: 373 QCNLCKAHKVTGVTDCLPDVEKSGLLCRQEHLGF 406
C C+ K+T V +C+ K+ + E L +
Sbjct: 123 FCPECE--KIT-VAECIETQSKAMTMLTIEQLSY 153
Score = 37 (18.1 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 10/22 (45%), Positives = 11/22 (50%)
Query: 44 PITSRTSSPQGSETSRRSTAKK 65
P +S SPQ S TS KK
Sbjct: 23 PHSSNGHSPQDSSTSPIKKKKK 44
>UNIPROTKB|F1M5S0 [details] [associations]
symbol:RGD1560612 "Protein RGD1560612" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 SMART:SM00184 SMART:SM00249
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GeneTree:ENSGT00530000063984 IPI:IPI00947688
Ensembl:ENSRNOT00000066219 ArrayExpress:F1M5S0 Uniprot:F1M5S0
Length = 573
Score = 152 (58.6 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 31/95 (32%), Positives = 51/95 (53%)
Query: 284 EEVLNILNTCEYPFTNIEKRLRVLQFLTDQILITSPVREDLIHEGGFQYDDHCRVCHRVG 343
+ + LN+ +P T KR + + + SP D G ++D C VC + G
Sbjct: 341 KSAVTYLNSTMHPGTR--KRANE-EHWPKPVSLPSPTSTD-----GDIHEDFCSVCRKSG 392
Query: 344 ELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCK 378
+LL C+TC V+HL+C++PPL+ +P+ W C C+
Sbjct: 393 QLLMCDTCSRVYHLDCLEPPLKTIPKGMWICPRCQ 427
>UNIPROTKB|H0YF52 [details] [associations]
symbol:TRIM66 "Tripartite motif-containing protein 66"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 SMART:SM00249 SMART:SM00297
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370 EMBL:AC091053
EMBL:AC104360 HGNC:HGNC:29005 Ensembl:ENST00000530502
Uniprot:H0YF52
Length = 286
Score = 146 (56.5 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 24/47 (51%), Positives = 29/47 (61%)
Query: 333 DDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKA 379
+D C VC GELLCC+ CP VFHL C P L P +W C LC++
Sbjct: 102 EDFCAVCLNGGELLCCDRCPKVFHLSCHVPALLSFPGGEWVCTLCRS 148
>MGI|MGI:2443812 [details] [associations]
symbol:Phf21b "PHD finger protein 21B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00249
MGI:MGI:2443812 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
PROSITE:PS01359 HOVERGEN:HBG080293 CTD:112885 eggNOG:NOG291382
OMA:SDKQALG EMBL:AK042863 IPI:IPI00227362 RefSeq:NP_001074635.2
UniGene:Mm.101022 ProteinModelPortal:Q8C966 SMR:Q8C966
STRING:Q8C966 PhosphoSite:Q8C966 PRIDE:Q8C966
Ensembl:ENSMUST00000159939 GeneID:271305 KEGG:mmu:271305
UCSC:uc007xco.2 GeneTree:ENSGT00530000063984 NextBio:393443
Bgee:Q8C966 CleanEx:MM_PHF21B Genevestigator:Q8C966
GermOnline:ENSMUSG00000016624 Uniprot:Q8C966
Length = 487
Score = 151 (58.2 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 38/144 (26%), Positives = 64/144 (44%)
Query: 239 EEDTQQTHFGPLDQ---KDSANSVLYFID-AMTWPEALRSYIESDKTFDEEVLNILNTCE 294
EE +Q DQ K++ + + + + E L I+S K + + + N
Sbjct: 211 EEPSQGAQATKEDQPPSKENPEKIAFMVALGLVTTEHLEE-IQS-KRQERKRRSTANPAY 268
Query: 295 YPFTNIEKRLRVLQFLTDQILITSPVREDLIHEGGFQYDDHCRVCHRVGELLCCETCPAV 354
F E++ +L + + +T+ ED +G +D+ C C R L C TC
Sbjct: 269 SGFLETERKRLASSYLHNPLFLTARANEDPCWKGEITHDEFCAACKRGASLQPCGTCSGA 328
Query: 355 FHLECVDPPLRDVPQEDWQCNLCK 378
+HL C+DPPL+ P+ W C C+
Sbjct: 329 YHLSCLDPPLKTPPKGLWVCPKCQ 352
Score = 41 (19.5 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 11/23 (47%), Positives = 13/23 (56%)
Query: 8 RGRPPKTPNTERPKFQVHLLKKP 30
R RPPK P T + K V +K P
Sbjct: 88 RDRPPKQPPTFQ-KATVVSIKNP 109
>UNIPROTKB|F1P5P6 [details] [associations]
symbol:PHF21A "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR001965 InterPro:IPR017956 InterPro:IPR019787
Pfam:PF00628 Pfam:PF02178 PROSITE:PS50016 SMART:SM00184
SMART:SM00249 SMART:SM00384 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003682 GO:GO:0000122 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0000118
GeneTree:ENSGT00530000063984 EMBL:AADN02033506 EMBL:AADN02033505
IPI:IPI00574652 Ensembl:ENSGALT00000013689 ArrayExpress:F1P5P6
Uniprot:F1P5P6
Length = 651
Score = 153 (58.9 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 22/47 (46%), Positives = 34/47 (72%)
Query: 332 YDDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCK 378
++D C VC + G+LL C+TC V+HL+C+DPPL+ +P+ W C C+
Sbjct: 459 HEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPKCQ 505
Score = 42 (19.8 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 18/77 (23%), Positives = 34/77 (44%)
Query: 10 RPPKTPNTERPKFQVHL-LKKPQYLQNLEA-------RGLNSPITS-RTSSPQGSE---T 57
+P + N ++ F V L L +L+ +++ R +P+ S P+ + T
Sbjct: 328 KPKREENPQKLAFMVSLGLVTHDHLEEIQSKRQERKRRTTANPVYSGAVFEPERKKSAVT 387
Query: 58 SRRSTAKKGTKRKSNPP 74
ST GT+++ PP
Sbjct: 388 YLNSTMHPGTRKRGRPP 404
Score = 41 (19.5 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 1 MYGRIKRRGRPPK 13
M+ ++RGRPPK
Sbjct: 393 MHPGTRKRGRPPK 405
>UNIPROTKB|F1NP02 [details] [associations]
symbol:PHF21A "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR001965 InterPro:IPR017956 InterPro:IPR019787
Pfam:PF00628 Pfam:PF02178 PROSITE:PS50016 SMART:SM00184
SMART:SM00249 SMART:SM00384 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GeneTree:ENSGT00530000063984 EMBL:AADN02033506
EMBL:AADN02033505 IPI:IPI00680686 Ensembl:ENSGALT00000030514
ArrayExpress:F1NP02 Uniprot:F1NP02
Length = 603
Score = 153 (58.9 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 22/47 (46%), Positives = 34/47 (72%)
Query: 332 YDDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCK 378
++D C VC + G+LL C+TC V+HL+C+DPPL+ +P+ W C C+
Sbjct: 411 HEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPKCQ 457
Score = 41 (19.5 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 1 MYGRIKRRGRPPK 13
M+ ++RGRPPK
Sbjct: 345 MHPGTRKRGRPPK 357
Score = 39 (18.8 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 14/54 (25%), Positives = 23/54 (42%)
Query: 25 HLLKKPQYLQNLEARGLNSPITS-RTSSPQGSE---TSRRSTAKKGTKRKSNPP 74
HL + Q + R +P+ S P+ + T ST GT+++ PP
Sbjct: 303 HLEEIQSKRQERKRRTTANPVYSGAVFEPERKKSAVTYLNSTMHPGTRKRGRPP 356
>UNIPROTKB|F1LPP8 [details] [associations]
symbol:Chd3 "Protein Chd3" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016818 "hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] InterPro:IPR001841
InterPro:IPR009071 InterPro:IPR000953 InterPro:IPR001965
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00628 Pfam:PF08073
PROSITE:PS50013 PROSITE:PS50016 SMART:SM00184 SMART:SM00249
SMART:SM00298 Pfam:PF00385 RGD:1311923 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
GeneTree:ENSGT00560000076896 GO:GO:0016818 IPI:IPI00779114
Ensembl:ENSRNOT00000057058 ArrayExpress:F1LPP8 Uniprot:F1LPP8
Length = 710
Score = 152 (58.6 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 25/55 (45%), Positives = 34/55 (61%)
Query: 333 DDH---CRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHKVTG 384
DDH CRVC GELLCC+ C + +H+ C++PPL D+P +W C C + G
Sbjct: 466 DDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCTCPVLKG 520
Score = 144 (55.7 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 23/56 (41%), Positives = 34/56 (60%)
Query: 329 GFQYD--DHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHKV 382
G++ D D+C VC + GE++ C+TCP +HL C+DP L P+ W C C+ V
Sbjct: 387 GYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGV 442
>UNIPROTKB|F1PQV6 [details] [associations]
symbol:PHF21A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR001965 InterPro:IPR017956 InterPro:IPR019787
Pfam:PF00628 Pfam:PF02178 PROSITE:PS50016 SMART:SM00184
SMART:SM00249 SMART:SM00384 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 OMA:SCTVNCN GeneTree:ENSGT00530000063984
EMBL:AAEX03011503 EMBL:AAEX03011502 Ensembl:ENSCAFT00000014853
Uniprot:F1PQV6
Length = 680
Score = 153 (58.9 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 22/47 (46%), Positives = 34/47 (72%)
Query: 332 YDDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCK 378
++D C VC + G+LL C+TC V+HL+C+DPPL+ +P+ W C C+
Sbjct: 487 HEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQ 533
Score = 42 (19.8 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 18/77 (23%), Positives = 34/77 (44%)
Query: 10 RPPKTPNTERPKFQVHL-LKKPQYLQNLEA-------RGLNSPITS-RTSSPQGSE---T 57
+P + N ++ F V L L +L+ +++ R +P+ S P+ + T
Sbjct: 356 KPKREENPQKLAFMVSLGLVTHDHLEEIQSKRQERKRRTTANPVYSGAVFEPERKKSAVT 415
Query: 58 SRRSTAKKGTKRKSNPP 74
ST GT+++ PP
Sbjct: 416 YLNSTMHPGTRKRGRPP 432
Score = 41 (19.5 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 1 MYGRIKRRGRPPK 13
M+ ++RGRPPK
Sbjct: 421 MHPGTRKRGRPPK 433
>UNIPROTKB|Q96BD5 [details] [associations]
symbol:PHF21A "PHD finger protein 21A" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0001967 "suckling behavior"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0000118 "histone deacetylase complex" evidence=IDA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0007596 "blood coagulation" evidence=TAS] Reactome:REACT_604
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR017956
InterPro:IPR019787 Pfam:PF00628 Pfam:PF02178 PROSITE:PS50016
SMART:SM00184 SMART:SM00249 SMART:SM00384 EMBL:CH471064
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0007596
GO:GO:0008270 GO:GO:0001967 GO:GO:0006351 GO:GO:0003682
GO:GO:0016568 GO:GO:0000122 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0000118 EMBL:AY090777 EMBL:AB051483
EMBL:AK021530 EMBL:AK023258 EMBL:BC015714 EMBL:BX648236
EMBL:AF208848 IPI:IPI00041959 IPI:IPI00054460 IPI:IPI00737174
RefSeq:NP_001095272.1 RefSeq:NP_057705.3 UniGene:Hs.502458 PDB:2PUY
PDB:2YQL PDBsum:2PUY PDBsum:2YQL ProteinModelPortal:Q96BD5
SMR:Q96BD5 IntAct:Q96BD5 MINT:MINT-1469147 STRING:Q96BD5
PhosphoSite:Q96BD5 DMDM:74731224 PaxDb:Q96BD5 PRIDE:Q96BD5
DNASU:51317 Ensembl:ENST00000257821 Ensembl:ENST00000323180
Ensembl:ENST00000418153 GeneID:51317 KEGG:hsa:51317 UCSC:uc001ncb.4
UCSC:uc001ncc.4 UCSC:uc001nce.2 CTD:51317 GeneCards:GC11M045950
HGNC:HGNC:24156 HPA:HPA023580 MIM:608325 neXtProt:NX_Q96BD5
PharmGKB:PA134977844 eggNOG:NOG310379 HOVERGEN:HBG080293
InParanoid:Q96BD5 OMA:SCTVNCN OrthoDB:EOG4KWJSH PhylomeDB:Q96BD5
EvolutionaryTrace:Q96BD5 GenomeRNAi:51317 NextBio:54681
ArrayExpress:Q96BD5 Bgee:Q96BD5 CleanEx:HS_PHF21A
Genevestigator:Q96BD5 GermOnline:ENSG00000135365 Uniprot:Q96BD5
Length = 680
Score = 153 (58.9 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 22/47 (46%), Positives = 34/47 (72%)
Query: 332 YDDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCK 378
++D C VC + G+LL C+TC V+HL+C+DPPL+ +P+ W C C+
Sbjct: 487 HEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQ 533
Score = 42 (19.8 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 18/77 (23%), Positives = 34/77 (44%)
Query: 10 RPPKTPNTERPKFQVHL-LKKPQYLQNLEA-------RGLNSPITS-RTSSPQGSE---T 57
+P + N ++ F V L L +L+ +++ R +P+ S P+ + T
Sbjct: 356 KPKREENPQKLAFMVSLGLVTHDHLEEIQSKRQERKRRTTANPVYSGAVFEPERKKSAVT 415
Query: 58 SRRSTAKKGTKRKSNPP 74
ST GT+++ PP
Sbjct: 416 YLNSTMHPGTRKRGRPP 432
Score = 41 (19.5 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 1 MYGRIKRRGRPPK 13
M+ ++RGRPPK
Sbjct: 421 MHPGTRKRGRPPK 433
>UNIPROTKB|F1MS13 [details] [associations]
symbol:PHF21A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003682 "chromatin binding" evidence=IEA] [GO:0001967
"suckling behavior" evidence=IEA] [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000118 "histone deacetylase complex" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR017956 InterPro:IPR019787 Pfam:PF00628 Pfam:PF02178
PROSITE:PS50016 SMART:SM00184 SMART:SM00249 SMART:SM00384
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0001967
GO:GO:0003682 GO:GO:0000122 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0000118 OMA:SCTVNCN
GeneTree:ENSGT00530000063984 EMBL:DAAA02041566 EMBL:DAAA02041567
IPI:IPI00716921 Ensembl:ENSBTAT00000012652 Uniprot:F1MS13
Length = 631
Score = 153 (58.9 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 22/47 (46%), Positives = 34/47 (72%)
Query: 332 YDDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCK 378
++D C VC + G+LL C+TC V+HL+C+DPPL+ +P+ W C C+
Sbjct: 435 HEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQ 481
Score = 41 (19.5 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 1 MYGRIKRRGRPPK 13
M+ ++RGRPPK
Sbjct: 369 MHPGTRKRGRPPK 381
Score = 38 (18.4 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 57 TSRRSTAKKGTKRKSNPP 74
T ST GT+++ PP
Sbjct: 363 TYLNSTMHPGTRKRGRPP 380
>UNIPROTKB|F1N7W5 [details] [associations]
symbol:LOC788840 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 OMA:SDKQALG
GeneTree:ENSGT00530000063984 EMBL:DAAA02014921 IPI:IPI00842008
Ensembl:ENSBTAT00000042589 Uniprot:F1N7W5
Length = 501
Score = 147 (56.8 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 31/85 (36%), Positives = 42/85 (49%)
Query: 302 KRLRVLQFLTDQILITSPVREDLIHEGGFQYDDHCRVCHRVGELLCCETCPAVFHLECVD 361
KRL +L + +T+ ED + +D+ C C R L C TCP +HL C+D
Sbjct: 292 KRL-ASNYLNTPLFLTARANEDPCWKNEITHDELCAACKRGTNLQPCGTCPRAYHLSCLD 350
Query: 362 PPLRDVPQEDWQCNLC--KAHKVTG 384
PPL+ P+ W C C KA K G
Sbjct: 351 PPLKTAPKGVWVCPKCQQKALKKDG 375
Score = 44 (20.5 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 18/67 (26%), Positives = 35/67 (52%)
Query: 11 PPKTPNTERPKFQVHLLK---KPQYLQNLEARGLNSPITSRTSSP-QGSETSRRSTAKKG 66
P +TP+ P FQV +++ +PQ E+R +P T P +G++ S + ++
Sbjct: 188 PLRTPSPLHPIFQVIIIQSQVQPQPENTTESR---AP----TEEPNRGAQASNKRKEERP 240
Query: 67 TKRKSNP 73
+ ++ NP
Sbjct: 241 SSQE-NP 246
Score = 41 (19.5 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 11/23 (47%), Positives = 13/23 (56%)
Query: 8 RGRPPKTPNTERPKFQVHLLKKP 30
R RPPK P T + K V +K P
Sbjct: 49 RDRPPKQPPTFQ-KATVVSIKNP 70
>ZFIN|ZDB-GENE-041111-187 [details] [associations]
symbol:chd4a "chromodomain helicase DNA binding
protein 4a" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 ZFIN:ZDB-GENE-041111-187
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:BX004850
IPI:IPI00962864 Ensembl:ENSDART00000005453 ArrayExpress:F1QWV5
Bgee:F1QWV5 Uniprot:F1QWV5
Length = 1930
Score = 161 (61.7 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 28/67 (41%), Positives = 40/67 (59%)
Query: 322 EDLIHEGGFQYDDH----CRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLC 377
ED G + DDH CRVC GELLCC++CP+ +H+ C++PPL ++P +W C C
Sbjct: 415 EDNEAGGEAEEDDHHMEFCRVCKDGGELLCCDSCPSSYHIHCLNPPLPEIPNGEWICPRC 474
Query: 378 KAHKVTG 384
+ G
Sbjct: 475 TCPSMKG 481
Score = 142 (55.0 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 20/52 (38%), Positives = 33/52 (63%)
Query: 329 GFQYD--DHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCK 378
G++ D D+C VC + GE++ C+TCP +H+ C+DP + P+ W C C+
Sbjct: 347 GYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGTWSCPHCE 398
Score = 43 (20.2 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 41 LNSPITSRTSSPQGSETSRRSTAKKGTKR 69
+NS S S+ + S +S + KK TK+
Sbjct: 313 INSVSVSNGSNSRSSRSSAKKKPKKKTKK 341
Score = 41 (19.5 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 45 ITSRTSSPQGSETSRRSTAKKGTKRKS 71
I S + S + S RS+AKK K+K+
Sbjct: 313 INSVSVSNGSNSRSSRSSAKKKPKKKT 339
>UNIPROTKB|F1SBF4 [details] [associations]
symbol:ZMYND8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00249 SMART:SM00297 Pfam:PF00855
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 InterPro:IPR021931 Pfam:PF12064
GeneTree:ENSGT00530000063428 OMA:VDNIRRK EMBL:CU607040
Ensembl:ENSSSCT00000008158 Uniprot:F1SBF4
Length = 931
Score = 150 (57.9 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 29/74 (39%), Positives = 43/74 (58%)
Query: 333 DDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHKVTGVTDCLPDV 392
D +C VCHR G++LCCE CP V+H +C+ L P+ DW C C+ K+T V +C+
Sbjct: 63 DFYCWVCHREGQVLCCELCPRVYHAKCLR--LTSEPEGDWFCPECE--KIT-VAECIETQ 117
Query: 393 EKSGLLCRQEHLGF 406
K+ + E L +
Sbjct: 118 SKAMTMLTIEQLSY 131
>RGD|1560612 [details] [associations]
symbol:Phf21a "PHD finger protein 21A" species:10116 "Rattus
norvegicus" [GO:0000118 "histone deacetylase complex"
evidence=IEA;ISO] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0001967
"suckling behavior" evidence=IEA;ISO] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR017956 InterPro:IPR019787 Pfam:PF00628 Pfam:PF02178
PROSITE:PS50016 SMART:SM00184 SMART:SM00249 SMART:SM00384
RGD:1560612 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
GeneTree:ENSGT00530000063984 IPI:IPI00952132
Ensembl:ENSRNOT00000067664 UCSC:RGD:1560612 ArrayExpress:F1M6K4
Uniprot:F1M6K4
Length = 639
Score = 149 (57.5 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 21/47 (44%), Positives = 34/47 (72%)
Query: 332 YDDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCK 378
++D C VC + G+LL C+TC V+HL+C++PPL+ +P+ W C C+
Sbjct: 447 HEDFCSVCRKSGQLLMCDTCSRVYHLDCLEPPLKTIPKGMWICPRCQ 493
Score = 42 (19.8 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 18/77 (23%), Positives = 34/77 (44%)
Query: 10 RPPKTPNTERPKFQVHL-LKKPQYLQNLEA-------RGLNSPITS-RTSSPQGSE---T 57
+P + N ++ F V L L +L+ +++ R +P+ S P+ + T
Sbjct: 316 KPKREENPQKLAFMVSLGLVTHDHLEEIQSKRQERKRRTTANPVYSGAVFEPERKKSAVT 375
Query: 58 SRRSTAKKGTKRKSNPP 74
ST GT+++ PP
Sbjct: 376 YLNSTMHPGTRKRGRPP 392
Score = 41 (19.5 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 1 MYGRIKRRGRPPK 13
M+ ++RGRPPK
Sbjct: 381 MHPGTRKRGRPPK 393
>UNIPROTKB|F1PT90 [details] [associations]
symbol:TRIM66 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR003649 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF00643 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00249 SMART:SM00297
SMART:SM00336 SMART:SM00502 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
GeneTree:ENSGT00530000062982 OMA:HMENERA EMBL:AAEX03012891
Ensembl:ENSCAFT00000011106 Uniprot:F1PT90
Length = 1374
Score = 148 (57.2 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 25/47 (53%), Positives = 29/47 (61%)
Query: 333 DDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKA 379
+D C VC GELLCC+ CP VFHL C P L P DW C LC++
Sbjct: 1128 EDFCAVCLNGGELLCCDRCPKVFHLSCHLPALLGFPGGDWVCTLCRS 1174
Score = 51 (23.0 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 15/60 (25%), Positives = 28/60 (46%)
Query: 18 ERPKFQVHLLKKPQYLQNLEARGLNSPITSRTSSP---QGSETSRRSTAKKGTKRKSNPP 74
++P Q++ K PQ+LQ +N + R +P Q E + +++ + T PP
Sbjct: 657 QQPSLQLNQTKSPQHLQQTIVGQINYIV--RQPAPVQSQSQEDAAQASDEHPTSEGPKPP 714
>UNIPROTKB|I3LF49 [details] [associations]
symbol:I3LF49 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00249 SMART:SM00297 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
GeneTree:ENSGT00530000062982 Ensembl:ENSSSCT00000030965
Uniprot:I3LF49
Length = 591
Score = 147 (56.8 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 24/46 (52%), Positives = 27/46 (58%)
Query: 333 DDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCK 378
+D C VC G+LLCCE CP VFHL C P L P DW C C+
Sbjct: 368 EDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFCR 413
>UNIPROTKB|B7ZM62 [details] [associations]
symbol:ZMYND8 "ZMYND8 protein" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR002893 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF01753 PRINTS:PR00503
PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50865
SMART:SM00249 SMART:SM00297 Pfam:PF00855 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 EMBL:AL049540 EMBL:AL031666
UniGene:Hs.446240 UniGene:Hs.658553 UniGene:Hs.668465
HGNC:HGNC:9397 HOVERGEN:HBG031823 InterPro:IPR021931 Pfam:PF12064
EMBL:AL390212 EMBL:BC136608 EMBL:BC144289 IPI:IPI00922821
SMR:B7ZM62 STRING:B7ZM62 Ensembl:ENST00000458360 UCSC:uc010zxz.1
HOGENOM:HOG000230951 Uniprot:B7ZM62
Length = 1054
Score = 150 (57.9 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 29/74 (39%), Positives = 43/74 (58%)
Query: 333 DDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHKVTGVTDCLPDV 392
D +C VCHR G++LCCE CP V+H +C+ L P+ DW C C+ K+T V +C+
Sbjct: 83 DFYCWVCHREGQVLCCELCPRVYHAKCLR--LTSEPEGDWFCPECE--KIT-VAECIETQ 137
Query: 393 EKSGLLCRQEHLGF 406
K+ + E L +
Sbjct: 138 SKAMTMLTIEQLSY 151
>UNIPROTKB|F1NRM1 [details] [associations]
symbol:F1NRM1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006959 "humoral immune response" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0045182 "translation regulator
activity" evidence=IEA] InterPro:IPR001965 InterPro:IPR004865
InterPro:IPR008087 InterPro:IPR019787 Pfam:PF00628 Pfam:PF03172
PRINTS:PR01711 PROSITE:PS50016 PROSITE:PS51414 SMART:SM00249
GO:GO:0005634 GO:GO:0005737 GO:GO:0006417 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0045182 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0006959
GeneTree:ENSGT00440000034278 EMBL:AADN02024441 EMBL:AADN02024442
IPI:IPI01017196 Ensembl:ENSGALT00000041318 ArrayExpress:F1NRM1
Uniprot:F1NRM1
Length = 537
Score = 146 (56.5 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 25/52 (48%), Positives = 31/52 (59%)
Query: 333 DDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHKVTG 384
+D C VC GEL+CC+ CP FHL C+ PPL VP+ W C+ C TG
Sbjct: 424 EDECAVCGDGGELICCDGCPRAFHLPCLVPPLPRVPRGLWLCSSCTGIPETG 475
Score = 131 (51.2 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 25/58 (43%), Positives = 29/58 (50%)
Query: 333 DDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQED----WQCNLCKAHKVTGVT 386
+D C VC GEL+CC+ CP FHL C+ PPL VP W C H G T
Sbjct: 292 EDECAVCGDGGELICCDGCPRAFHLPCLVPPLPRVPSPATAPLWNCTHTAHHSTDGRT 349
>UNIPROTKB|Q2HXV1 [details] [associations]
symbol:ZMYND8 "RACK7 isoform l" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR002893 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF01753 PROSITE:PS01360
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50865 SMART:SM00249
SMART:SM00297 Pfam:PF00855 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.20.920.10 SUPFAM:SSF47370 InterPro:IPR000313
PROSITE:PS50812 EMBL:AL049540 EMBL:AL031666 UniGene:Hs.446240
UniGene:Hs.658553 UniGene:Hs.668465 HGNC:HGNC:9397
HOVERGEN:HBG031823 InterPro:IPR021931 Pfam:PF12064 EMBL:AL390212
EMBL:DQ368680 IPI:IPI01009867 SMR:Q2HXV1 Ensembl:ENST00000540497
UCSC:uc002xsv.1 Uniprot:Q2HXV1
Length = 1134
Score = 150 (57.9 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 29/74 (39%), Positives = 43/74 (58%)
Query: 333 DDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHKVTGVTDCLPDV 392
D +C VCHR G++LCCE CP V+H +C+ L P+ DW C C+ K+T V +C+
Sbjct: 83 DFYCWVCHREGQVLCCELCPRVYHAKCLR--LTSEPEGDWFCPECE--KIT-VAECIETQ 137
Query: 393 EKSGLLCRQEHLGF 406
K+ + E L +
Sbjct: 138 SKAMTMLTIEQLSY 151
>UNIPROTKB|Q2HXV3 [details] [associations]
symbol:ZMYND8 "Protein kinase C-binding protein 1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR002893 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF01753 PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50865 SMART:SM00249 SMART:SM00297 Pfam:PF00855
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 EMBL:AL049540 EMBL:AL031666
UniGene:Hs.446240 UniGene:Hs.658553 UniGene:Hs.668465
HGNC:HGNC:9397 HOVERGEN:HBG031823 InterPro:IPR021931 Pfam:PF12064
EMBL:AL390212 EMBL:DQ368678 IPI:IPI00941004 SMR:Q2HXV3
STRING:Q2HXV3 Ensembl:ENST00000372023 UCSC:uc010ghr.1
Uniprot:Q2HXV3
Length = 1136
Score = 150 (57.9 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 29/74 (39%), Positives = 43/74 (58%)
Query: 333 DDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHKVTGVTDCLPDV 392
D +C VCHR G++LCCE CP V+H +C+ L P+ DW C C+ K+T V +C+
Sbjct: 83 DFYCWVCHREGQVLCCELCPRVYHAKCLR--LTSEPEGDWFCPECE--KIT-VAECIETQ 137
Query: 393 EKSGLLCRQEHLGF 406
K+ + E L +
Sbjct: 138 SKAMTMLTIEQLSY 151
>UNIPROTKB|E2R8R1 [details] [associations]
symbol:ZMYND8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR002893
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF01753
PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50865
SMART:SM00249 SMART:SM00297 Pfam:PF00855 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 InterPro:IPR021931 Pfam:PF12064
GeneTree:ENSGT00530000063428 EMBL:AAEX03013984 EMBL:AAEX03013985
Ensembl:ENSCAFT00000017108 OMA:PTINKGR Uniprot:E2R8R1
Length = 1143
Score = 150 (57.9 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 29/74 (39%), Positives = 43/74 (58%)
Query: 333 DDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHKVTGVTDCLPDV 392
D +C VCHR G++LCCE CP V+H +C+ L P+ DW C C+ K+T V +C+
Sbjct: 83 DFYCWVCHREGQVLCCELCPRVYHAKCLR--LTSEPEGDWFCPECE--KIT-VAECIETQ 137
Query: 393 EKSGLLCRQEHLGF 406
K+ + E L +
Sbjct: 138 SKAMTMLTIEQLSY 151
>ZFIN|ZDB-GENE-030131-2773 [details] [associations]
symbol:trim33 "tripartite motif-containing 33"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0033333
"fin development" evidence=IMP] [GO:0030218 "erythrocyte
differentiation" evidence=IGI;IMP] [GO:0034243 "regulation of
transcription elongation from RNA polymerase II promoter"
evidence=IGI] [GO:0035162 "embryonic hemopoiesis" evidence=IMP]
[GO:0035166 "post-embryonic hemopoiesis" evidence=IMP] [GO:0060215
"primitive hemopoiesis" evidence=IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF00643
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00249 SMART:SM00297 SMART:SM00336
SMART:SM00502 Prosite:PS00518 ZFIN:ZDB-GENE-030131-2773
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 GO:GO:0030218
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR017907 Gene3D:1.20.920.10 SUPFAM:SSF47370 GO:GO:0034243
GO:GO:0035166 GO:GO:0060215 HOGENOM:HOG000252971 HOVERGEN:HBG054599
GeneTree:ENSGT00530000062982 CTD:51592 KO:K08883 GO:GO:0033333
EMBL:BX321886 IPI:IPI00512685 RefSeq:NP_001002871.2
UniGene:Dr.80165 SMR:B0S5U2 Ensembl:ENSDART00000020116
GeneID:324053 KEGG:dre:324053 NextBio:20808565 Uniprot:B0S5U2
Length = 1176
Score = 150 (57.9 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 23/46 (50%), Positives = 28/46 (60%)
Query: 333 DDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCK 378
+D C VC GELLCC+ CP VFH+ C P L+ P DW C C+
Sbjct: 934 EDWCAVCQNGGELLCCDHCPKVFHITCHIPTLKSSPSGDWMCTFCR 979
>UNIPROTKB|J3KPU3 [details] [associations]
symbol:ZMYND8 "Protein kinase C-binding protein 1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR002893 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF01753 PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50865 SMART:SM00249 SMART:SM00297 Pfam:PF00855
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 EMBL:AL049540 EMBL:AL031666
HGNC:HGNC:9397 InterPro:IPR021931 Pfam:PF12064 EMBL:AL390212
ProteinModelPortal:J3KPU3 Ensembl:ENST00000396281 Uniprot:J3KPU3
Length = 1186
Score = 150 (57.9 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 29/74 (39%), Positives = 43/74 (58%)
Query: 333 DDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHKVTGVTDCLPDV 392
D +C VCHR G++LCCE CP V+H +C+ L P+ DW C C+ K+T V +C+
Sbjct: 88 DFYCWVCHREGQVLCCELCPRVYHAKCLR--LTSEPEGDWFCPECE--KIT-VAECIETQ 142
Query: 393 EKSGLLCRQEHLGF 406
K+ + E L +
Sbjct: 143 SKAMTMLTIEQLSY 156
>MGI|MGI:2384756 [details] [associations]
symbol:Phf21a "PHD finger protein 21A" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=ISO]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0001967 "suckling
behavior" evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR001965 InterPro:IPR017956 InterPro:IPR019787
Pfam:PF00628 Pfam:PF02178 PROSITE:PS50016 SMART:SM00184
SMART:SM00249 SMART:SM00384 MGI:MGI:2384756 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0001967 GO:GO:0006351 GO:GO:0003682 GO:GO:0016568
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 CTD:51317
eggNOG:NOG310379 HOVERGEN:HBG080293 EMBL:AB105178 EMBL:AK129424
EMBL:AK037174 EMBL:BC019181 EMBL:AY206982 IPI:IPI00124469
IPI:IPI00228265 IPI:IPI00453806 IPI:IPI00742280 IPI:IPI00742299
IPI:IPI00742330 IPI:IPI00742344 IPI:IPI00742352 IPI:IPI00742439
RefSeq:NP_001103161.1 RefSeq:NP_620094.2 UniGene:Mm.330408
ProteinModelPortal:Q6ZPK0 SMR:Q6ZPK0 STRING:Q6ZPK0
PhosphoSite:Q6ZPK0 PRIDE:Q6ZPK0 GeneID:192285 KEGG:mmu:192285
UCSC:uc008kxi.2 HOGENOM:HOG000231466 ChiTaRS:PHF21A NextBio:371282
CleanEx:MM_PHF21A Genevestigator:Q6ZPK0
GermOnline:ENSMUSG00000058318 Uniprot:Q6ZPK0
Length = 659
Score = 149 (57.5 bits), Expect = 5.2e-07, Sum P(2) = 5.2e-07
Identities = 21/47 (44%), Positives = 34/47 (72%)
Query: 332 YDDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCK 378
++D C VC + G+LL C+TC V+HL+C++PPL+ +P+ W C C+
Sbjct: 467 HEDFCSVCRKSGQLLMCDTCSRVYHLDCLEPPLKTIPKGMWICPRCQ 513
Score = 41 (19.5 bits), Expect = 5.2e-07, Sum P(2) = 5.2e-07
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 1 MYGRIKRRGRPPK 13
M+ ++RGRPPK
Sbjct: 401 MHPGTRKRGRPPK 413
Score = 39 (18.8 bits), Expect = 8.3e-07, Sum P(2) = 8.3e-07
Identities = 14/54 (25%), Positives = 23/54 (42%)
Query: 25 HLLKKPQYLQNLEARGLNSPITS-RTSSPQGSE---TSRRSTAKKGTKRKSNPP 74
HL + Q + R +P+ S P+ + T ST GT+++ PP
Sbjct: 359 HLEEIQSKRQERKRRTTANPVYSGAVFEPERKKSAVTYLNSTMHPGTRKRGRPP 412
>RGD|1311923 [details] [associations]
symbol:Chd3 "chromodomain helicase DNA binding protein 3"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005813 "centrosome" evidence=ISO]
[GO:0006333 "chromatin assembly or disassembly" evidence=ISO]
[GO:0007051 "spindle organization" evidence=ISO] [GO:0016581 "NuRD
complex" evidence=ISO] [GO:0045111 "intermediate filament
cytoskeleton" evidence=ISO] [GO:0051297 "centrosome organization"
evidence=ISO] InterPro:IPR001841 InterPro:IPR009071
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR012957
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
SMART:SM00249 SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1311923
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:1.10.30.10 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 HOVERGEN:HBG005326
IPI:IPI00369880 EMBL:AY903245 EMBL:AY903246 UniGene:Rn.232095
STRING:Q2KML1 UCSC:RGD:1311923 Genevestigator:Q2KML1 Uniprot:Q2KML1
Length = 1925
Score = 152 (58.6 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 25/55 (45%), Positives = 34/55 (61%)
Query: 333 DDH---CRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHKVTG 384
DDH CRVC GELLCC+ C + +H+ C++PPL D+P +W C C + G
Sbjct: 409 DDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCTCPVLKG 463
Score = 144 (55.7 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 23/56 (41%), Positives = 34/56 (60%)
Query: 329 GFQYD--DHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHKV 382
G++ D D+C VC + GE++ C+TCP +HL C+DP L P+ W C C+ V
Sbjct: 330 GYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGV 385
>UNIPROTKB|F1N544 [details] [associations]
symbol:CHD3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0006333
"chromatin assembly or disassembly" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 GO:GO:0006333 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
GeneTree:ENSGT00560000076896 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 OMA:EPEPGYR EMBL:DAAA02048806
IPI:IPI00716282 Ensembl:ENSBTAT00000019119 ArrayExpress:F1N544
Uniprot:F1N544
Length = 1998
Score = 152 (58.6 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 25/55 (45%), Positives = 34/55 (61%)
Query: 333 DDH---CRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHKVTG 384
DDH CRVC GELLCC+ C + +H+ C++PPL D+P +W C C + G
Sbjct: 449 DDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCTCPVLKG 503
Score = 144 (55.7 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 23/56 (41%), Positives = 34/56 (60%)
Query: 329 GFQYD--DHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHKV 382
G++ D D+C VC + GE++ C+TCP +HL C+DP L P+ W C C+ V
Sbjct: 369 GYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGV 424
>UNIPROTKB|E2RTI2 [details] [associations]
symbol:CHD3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0006333
"chromatin assembly or disassembly" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 GO:GO:0006333 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
GeneTree:ENSGT00560000076896 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 OMA:EPEPGYR EMBL:AAEX03003635
EMBL:AAEX03003636 Ensembl:ENSCAFT00000026729 Uniprot:E2RTI2
Length = 1998
Score = 152 (58.6 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 25/55 (45%), Positives = 34/55 (61%)
Query: 333 DDH---CRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHKVTG 384
DDH CRVC GELLCC+ C + +H+ C++PPL D+P +W C C + G
Sbjct: 451 DDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCTCPVLKG 505
Score = 144 (55.7 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 23/56 (41%), Positives = 34/56 (60%)
Query: 329 GFQYD--DHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHKV 382
G++ D D+C VC + GE++ C+TCP +HL C+DP L P+ W C C+ V
Sbjct: 372 GYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGV 427
>UNIPROTKB|Q12873 [details] [associations]
symbol:CHD3 "Chromodomain-helicase-DNA-binding protein 3"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0004386 "helicase activity" evidence=NAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0008270
"zinc ion binding" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0007051 "spindle organization" evidence=IDA]
[GO:0005813 "centrosome" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0051297 "centrosome organization" evidence=IDA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=TAS] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=TAS] [GO:0016581 "NuRD complex" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0045111 "intermediate
filament cytoskeleton" evidence=IDA] InterPro:IPR001841
InterPro:IPR009071 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005737 GO:GO:0005813
EMBL:CH471108 GO:GO:0005730 GO:GO:0051297 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006357 GO:GO:0006351
GO:GO:0016568 Gene3D:1.10.30.10 GO:GO:0045111 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0004003
InterPro:IPR019786 PROSITE:PS01359
Pathway_Interaction_DB:hdac_classi_pathway InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0007051 GO:GO:0016581 InterPro:IPR023780
InterPro:IPR023779 PROSITE:PS00598 HOGENOM:HOG000231124
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1107 EMBL:U91543 EMBL:AF006515 EMBL:U08379 IPI:IPI00373870
IPI:IPI00411592 RefSeq:NP_001005271.2 RefSeq:NP_001005273.1
RefSeq:NP_005843.2 UniGene:Hs.25601 ProteinModelPortal:Q12873
SMR:Q12873 DIP:DIP-32496N IntAct:Q12873 MINT:MINT-1185641
STRING:Q12873 PhosphoSite:Q12873 DMDM:88911273 PaxDb:Q12873
PRIDE:Q12873 Ensembl:ENST00000330494 Ensembl:ENST00000358181
GeneID:1107 KEGG:hsa:1107 UCSC:uc002gje.2 UCSC:uc002gjf.2
GeneCards:GC17P007788 H-InvDB:HIX0013516 HGNC:HGNC:1918
HPA:HPA043368 MIM:602120 neXtProt:NX_Q12873 PharmGKB:PA26454
HOVERGEN:HBG005326 KO:K11642 PhylomeDB:Q12873 ChiTaRS:CHD3
GenomeRNAi:1107 NextBio:4590 ArrayExpress:Q12873 Bgee:Q12873
CleanEx:HS_CHD3 Genevestigator:Q12873 GermOnline:ENSG00000170004
Uniprot:Q12873
Length = 2000
Score = 152 (58.6 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 25/55 (45%), Positives = 34/55 (61%)
Query: 333 DDH---CRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHKVTG 384
DDH CRVC GELLCC+ C + +H+ C++PPL D+P +W C C + G
Sbjct: 453 DDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCTCPVLKG 507
Score = 144 (55.7 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 23/56 (41%), Positives = 34/56 (60%)
Query: 329 GFQYD--DHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHKV 382
G++ D D+C VC + GE++ C+TCP +HL C+DP L P+ W C C+ V
Sbjct: 373 GYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGV 428
>UNIPROTKB|F1ST12 [details] [associations]
symbol:CHD3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0006333
"chromatin assembly or disassembly" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 GO:GO:0006333 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
GeneTree:ENSGT00560000076896 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 CTD:1107 KO:K11642 OMA:EPEPGYR
EMBL:CU972380 RefSeq:XP_003132000.1 UniGene:Ssc.1663
Ensembl:ENSSSCT00000019548 GeneID:100188906 KEGG:ssc:100188906
Uniprot:F1ST12
Length = 2002
Score = 152 (58.6 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 25/55 (45%), Positives = 34/55 (61%)
Query: 333 DDH---CRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHKVTG 384
DDH CRVC GELLCC+ C + +H+ C++PPL D+P +W C C + G
Sbjct: 453 DDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCTCPVLKG 507
Score = 144 (55.7 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 23/56 (41%), Positives = 34/56 (60%)
Query: 329 GFQYD--DHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHKV 382
G++ D D+C VC + GE++ C+TCP +HL C+DP L P+ W C C+ V
Sbjct: 373 GYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGV 428
>UNIPROTKB|F1LPP7 [details] [associations]
symbol:Chd3 "Protein Chd3" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1311923 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:1.10.30.10 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 IPI:IPI00369880
Ensembl:ENSRNOT00000057060 Uniprot:F1LPP7
Length = 2020
Score = 152 (58.6 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 25/55 (45%), Positives = 34/55 (61%)
Query: 333 DDH---CRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHKVTG 384
DDH CRVC GELLCC+ C + +H+ C++PPL D+P +W C C + G
Sbjct: 504 DDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCTCPVLKG 558
Score = 144 (55.7 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 23/56 (41%), Positives = 34/56 (60%)
Query: 329 GFQYD--DHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHKV 382
G++ D D+C VC + GE++ C+TCP +HL C+DP L P+ W C C+ V
Sbjct: 425 GYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGV 480
>UNIPROTKB|F1M7Q0 [details] [associations]
symbol:Chd3 "Protein Chd3" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1311923 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:1.10.30.10 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 OMA:EPEPGYR
IPI:IPI00959834 Ensembl:ENSRNOT00000012983 Uniprot:F1M7Q0
Length = 2054
Score = 152 (58.6 bits), Expect = 5.6e-07, P = 5.6e-07
Identities = 25/55 (45%), Positives = 34/55 (61%)
Query: 333 DDH---CRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHKVTG 384
DDH CRVC GELLCC+ C + +H+ C++PPL D+P +W C C + G
Sbjct: 504 DDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCTCPVLKG 558
Score = 144 (55.7 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 23/56 (41%), Positives = 34/56 (60%)
Query: 329 GFQYD--DHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHKV 382
G++ D D+C VC + GE++ C+TCP +HL C+DP L P+ W C C+ V
Sbjct: 425 GYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGV 480
>UNIPROTKB|E9PG89 [details] [associations]
symbol:CHD3 "Chromodomain-helicase-DNA-binding protein 3"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0006333 "chromatin assembly or
disassembly" evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0045111 "intermediate filament cytoskeleton"
evidence=IDA] InterPro:IPR001841 InterPro:IPR009071
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR012957
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
SMART:SM00249 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0005730 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:1.10.30.10 GO:GO:0045111
GO:GO:0006333 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1107 RefSeq:NP_001005271.2 UniGene:Hs.25601 GeneID:1107
KEGG:hsa:1107 HGNC:HGNC:1918 KO:K11642 ChiTaRS:CHD3 GenomeRNAi:1107
NextBio:4590 EMBL:AC104581 IPI:IPI00465222
ProteinModelPortal:E9PG89 SMR:E9PG89 PRIDE:E9PG89
Ensembl:ENST00000380358 UCSC:uc002gjd.2 OMA:EPEPGYR
ArrayExpress:E9PG89 Bgee:E9PG89 Uniprot:E9PG89
Length = 2059
Score = 152 (58.6 bits), Expect = 5.6e-07, P = 5.6e-07
Identities = 25/55 (45%), Positives = 34/55 (61%)
Query: 333 DDH---CRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHKVTG 384
DDH CRVC GELLCC+ C + +H+ C++PPL D+P +W C C + G
Sbjct: 512 DDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCTCPVLKG 566
Score = 144 (55.7 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 23/56 (41%), Positives = 34/56 (60%)
Query: 329 GFQYD--DHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHKV 382
G++ D D+C VC + GE++ C+TCP +HL C+DP L P+ W C C+ V
Sbjct: 432 GYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGV 487
>UNIPROTKB|E7EN20 [details] [associations]
symbol:TRIM33 "E3 ubiquitin-protein ligase TRIM33"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
PROSITE:PS50014 PROSITE:PS50016 SMART:SM00249 SMART:SM00297
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.20.920.10
SUPFAM:SSF47370 EMBL:AL390241 EMBL:AL035410 HGNC:HGNC:16290
ChiTaRS:TRIM33 IPI:IPI00748247 ProteinModelPortal:E7EN20 SMR:E7EN20
Ensembl:ENST00000450349 UCSC:uc010owr.2 ArrayExpress:E7EN20
Bgee:E7EN20 Uniprot:E7EN20
Length = 759
Score = 147 (56.8 bits), Expect = 6.0e-07, P = 6.0e-07
Identities = 24/46 (52%), Positives = 27/46 (58%)
Query: 333 DDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCK 378
+D C VC G+LLCCE CP VFHL C P L P DW C C+
Sbjct: 519 EDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFCR 564
>ZFIN|ZDB-GENE-030131-3876 [details] [associations]
symbol:phf12a "PHD finger protein 12a"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR000253 InterPro:IPR001965 InterPro:IPR008984
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50006 PROSITE:PS50016
SMART:SM00249 ZFIN:ZDB-GENE-030131-3876 GO:GO:0046872 GO:GO:0008270
Gene3D:2.60.200.20 SUPFAM:SSF49879 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GeneTree:ENSGT00440000033777
EMBL:CU694807 IPI:IPI00897047 RefSeq:XP_001919955.3
UniGene:Dr.79049 Ensembl:ENSDART00000111104 GeneID:562152
KEGG:dre:562152 CTD:562152 NextBio:20884273 Uniprot:E7EXI6
Length = 941
Score = 148 (57.2 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 25/50 (50%), Positives = 32/50 (64%)
Query: 334 DHCRVCHRVGELLCCETCPAVFHLECVDPPL-RDV-PQEDWQCNLCKAHK 381
D C C G+LLCC+ CPA FHL+C +PPL R++ P DW C+ C K
Sbjct: 57 DICDSCREGGDLLCCDHCPAAFHLQCCNPPLSREMLPSGDWMCHRCTVRK 106
>UNIPROTKB|F1P4C7 [details] [associations]
symbol:TRIM24 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0002039 "p53 binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003713 "transcription
coactivator activity" evidence=IEA] [GO:0004672 "protein kinase
activity" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0005719 "nuclear euchromatin"
evidence=IEA] [GO:0005726 "perichromatin fibrils" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0031647 "regulation
of protein stability" evidence=IEA] [GO:0034056 "estrogen response
element binding" evidence=IEA] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0046777 "protein
autophosphorylation" evidence=IEA] [GO:0055074 "calcium ion
homeostasis" evidence=IEA] [GO:0070562 "regulation of vitamin D
receptor signaling pathway" evidence=IEA] [GO:0070577 "histone
acetyl-lysine binding" evidence=IEA] [GO:0071391 "cellular response
to estrogen stimulus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0016922 "ligand-dependent nuclear receptor
binding" evidence=ISS] InterPro:IPR000315 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR003649 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF00643 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50119 SMART:SM00249
SMART:SM00297 SMART:SM00336 SMART:SM00502 GO:GO:0005737
GO:GO:0045892 GO:GO:0045893 GO:GO:0008285 GO:GO:0042981
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0046777
GO:GO:0003682 GO:GO:0004672 GO:GO:0031647 GO:GO:0030163
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0005719
GO:GO:0004842 GO:GO:0055074 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0016922 GO:GO:0071391
GO:GO:0034056 GO:GO:0070562 GO:GO:0005726 OMA:FWAQNIF
GeneTree:ENSGT00530000062982 EMBL:AADN02006351 EMBL:AADN02006352
IPI:IPI00591737 Ensembl:ENSGALT00000020916 Uniprot:F1P4C7
Length = 928
Score = 148 (57.2 bits), Expect = 6.3e-07, Sum P(2) = 6.3e-07
Identities = 24/46 (52%), Positives = 27/46 (58%)
Query: 333 DDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCK 378
+D C VC GELLCCE CP VFHL C P L P +W C C+
Sbjct: 704 EDWCAVCQNGGELLCCEKCPKVFHLSCHVPSLMSFPSGEWICTFCR 749
Score = 45 (20.9 bits), Expect = 6.3e-07, Sum P(2) = 6.3e-07
Identities = 12/55 (21%), Positives = 23/55 (41%)
Query: 10 RPPKTPNTERPKFQVHLLKKPQYLQNLEARGLNSPITSRTSSPQGSETSRRSTAK 64
+PP + P V P + ++ P+ S ++S GS S S+++
Sbjct: 534 KPPSNRTVQSPNSSV---PSPGISGGVSVTSIHPPVRSPSASSVGSRESSSSSSR 585
Score = 39 (18.8 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 14/45 (31%), Positives = 22/45 (48%)
Query: 25 HLLKKPQYLQNLEARGLNSPITSRTSSPQGSETSRRSTAKKGTKR 69
H +K Q Q LE GL+ + + + + +S STA +KR
Sbjct: 221 HRMKLMQ--QQLEVAGLSKQLEHAMNFSKWAVSSGSSTALLYSKR 263
>UNIPROTKB|H0Y612 [details] [associations]
symbol:TRIM33 "E3 ubiquitin-protein ligase TRIM33"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF00643
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50119 SMART:SM00249
SMART:SM00297 SMART:SM00336 SMART:SM00502 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370 EMBL:AL390241
EMBL:AL035410 HGNC:HGNC:16290 ChiTaRS:TRIM33
ProteinModelPortal:H0Y612 PRIDE:H0Y612 Ensembl:ENST00000448034
Bgee:H0Y612 Uniprot:H0Y612
Length = 888
Score = 147 (56.8 bits), Expect = 7.3e-07, P = 7.3e-07
Identities = 24/46 (52%), Positives = 27/46 (58%)
Query: 333 DDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCK 378
+D C VC G+LLCCE CP VFHL C P L P DW C C+
Sbjct: 648 EDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFCR 693
>UNIPROTKB|I3LBT0 [details] [associations]
symbol:I3LBT0 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR000315 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR003649 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF00643 PROSITE:PS50014
PROSITE:PS50016 PROSITE:PS50119 SMART:SM00249 SMART:SM00297
SMART:SM00336 SMART:SM00502 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
GeneTree:ENSGT00530000062982 Ensembl:ENSSSCT00000029002
Uniprot:I3LBT0
Length = 945
Score = 147 (56.8 bits), Expect = 7.9e-07, P = 7.9e-07
Identities = 24/46 (52%), Positives = 27/46 (58%)
Query: 333 DDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCK 378
+D C VC G+LLCCE CP VFHL C P L P DW C C+
Sbjct: 705 EDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFCR 750
>UNIPROTKB|F1P5H8 [details] [associations]
symbol:TRIM33 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0017015 "regulation of
transforming growth factor beta receptor signaling pathway"
evidence=IEA] [GO:0030514 "negative regulation of BMP signaling
pathway" evidence=IEA] [GO:0070410 "co-SMAD binding" evidence=IEA]
[GO:0070412 "R-SMAD binding" evidence=IEA] InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF00643
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50119
SMART:SM00249 SMART:SM00297 SMART:SM00336 SMART:SM00502
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.20.920.10
SUPFAM:SSF47370 GO:GO:0030514 GO:GO:0017015
GeneTree:ENSGT00530000062982 OMA:PIRSLMH EMBL:AADN02045019
IPI:IPI00589805 Ensembl:ENSGALT00000003070 Uniprot:F1P5H8
Length = 947
Score = 147 (56.8 bits), Expect = 8.0e-07, P = 8.0e-07
Identities = 24/46 (52%), Positives = 27/46 (58%)
Query: 333 DDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCK 378
+D C VC G+LLCCE CP VFHL C P L P DW C C+
Sbjct: 724 EDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFCR 769
>UNIPROTKB|I3LD78 [details] [associations]
symbol:I3LD78 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR000315 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR003649 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF00643 PROSITE:PS50014
PROSITE:PS50016 PROSITE:PS50119 SMART:SM00249 SMART:SM00297
SMART:SM00336 SMART:SM00502 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
GeneTree:ENSGT00530000062982 Ensembl:ENSSSCT00000022292 OMA:HCLELED
Uniprot:I3LD78
Length = 948
Score = 147 (56.8 bits), Expect = 8.0e-07, P = 8.0e-07
Identities = 24/46 (52%), Positives = 27/46 (58%)
Query: 333 DDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCK 378
+D C VC G+LLCCE CP VFHL C P L P DW C C+
Sbjct: 708 EDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFCR 753
>UNIPROTKB|F1PLN6 [details] [associations]
symbol:TRIM33 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070412 "R-SMAD binding" evidence=IEA]
[GO:0070410 "co-SMAD binding" evidence=IEA] [GO:0030514 "negative
regulation of BMP signaling pathway" evidence=IEA] [GO:0017015
"regulation of transforming growth factor beta receptor signaling
pathway" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF00643
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50119 SMART:SM00184
SMART:SM00249 SMART:SM00297 SMART:SM00336 SMART:SM00502
Prosite:PS00518 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR017907 Gene3D:1.20.920.10 SUPFAM:SSF47370 GO:GO:0030514
GO:GO:0017015 GeneTree:ENSGT00530000062982 OMA:PIRSLMH
EMBL:AAEX03010993 Ensembl:ENSCAFT00000015037 Uniprot:F1PLN6
Length = 995
Score = 147 (56.8 bits), Expect = 8.5e-07, P = 8.5e-07
Identities = 24/46 (52%), Positives = 27/46 (58%)
Query: 333 DDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCK 378
+D C VC G+LLCCE CP VFHL C P L P DW C C+
Sbjct: 755 EDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFCR 800
>ZFIN|ZDB-GENE-121031-4 [details] [associations]
symbol:chd3 "chromodomain helicase DNA binding
protein 3" species:7955 "Danio rerio" [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR001965
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00628 Pfam:PF08073
PROSITE:PS50016 SMART:SM00184 SMART:SM00249 ZFIN:ZDB-GENE-121031-4
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:1.10.30.10 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0016818 EMBL:BC127572
EMBL:BC127574 IPI:IPI00488488 UniGene:Dr.66871 eggNOG:NOG299768
InParanoid:A0PJQ7 OMA:DSTHEET Uniprot:A0PJQ7
Length = 430
Score = 142 (55.0 bits), Expect = 8.9e-07, P = 8.9e-07
Identities = 21/52 (40%), Positives = 33/52 (63%)
Query: 329 GFQYD--DHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCK 378
G++ D D+C VC + GE++ C+TCP +HL C++P L P+ W C C+
Sbjct: 377 GYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLEPELEKAPEGKWSCPHCE 428
>UNIPROTKB|F1MNE1 [details] [associations]
symbol:TRIM33 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070412 "R-SMAD binding" evidence=IEA] [GO:0070410
"co-SMAD binding" evidence=IEA] [GO:0030514 "negative regulation of
BMP signaling pathway" evidence=IEA] [GO:0017015 "regulation of
transforming growth factor beta receptor signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF00643
Pfam:PF13639 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00249
SMART:SM00297 SMART:SM00336 SMART:SM00502 Prosite:PS00518
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR017907
Gene3D:1.20.920.10 SUPFAM:SSF47370 GO:GO:0030514 GO:GO:0017015
GeneTree:ENSGT00530000062982 CTD:51592 KO:K08883 OMA:PIRSLMH
EMBL:DAAA02007465 EMBL:DAAA02007466 EMBL:DAAA02007467
IPI:IPI00717094 RefSeq:NP_001192947.1 UniGene:Bt.91873
ProteinModelPortal:F1MNE1 PRIDE:F1MNE1 Ensembl:ENSBTAT00000001967
GeneID:533296 KEGG:bta:533296 NextBio:20875989 Uniprot:F1MNE1
Length = 1126
Score = 147 (56.8 bits), Expect = 9.9e-07, P = 9.9e-07
Identities = 24/46 (52%), Positives = 27/46 (58%)
Query: 333 DDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCK 378
+D C VC G+LLCCE CP VFHL C P L P DW C C+
Sbjct: 886 EDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFCR 931
>UNIPROTKB|Q9UPN9 [details] [associations]
symbol:TRIM33 "E3 ubiquitin-protein ligase TRIM33"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0008270 "zinc ion binding" evidence=NAS]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0017015
"regulation of transforming growth factor beta receptor signaling
pathway" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0030514 "negative regulation of BMP signaling pathway"
evidence=IDA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=TAS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0006351 "transcription,
DNA-dependent" evidence=TAS] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=TAS] [GO:0007179
"transforming growth factor beta receptor signaling pathway"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0070410 "co-SMAD
binding" evidence=IPI] [GO:0070412 "R-SMAD binding" evidence=IPI]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] Reactome:REACT_71
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR003649 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF00643 Pfam:PF13639 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00249 SMART:SM00297 SMART:SM00336
SMART:SM00502 UniPathway:UPA00143 EMBL:AF119043 Prosite:PS00518
Reactome:REACT_111102 GO:GO:0005654 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0000122 GO:GO:0007179 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0004842 GO:GO:0006367
InterPro:IPR017907 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 eggNOG:COG5076 GO:GO:0030514 GO:GO:0017015
MIM:188550 Orphanet:146 PDB:3U5N PDB:3U5O PDB:3U5P PDBsum:3U5N
PDBsum:3U5O PDBsum:3U5P EMBL:AL390241 HOVERGEN:HBG054599
EMBL:AF220136 EMBL:AF220137 EMBL:AB029036 EMBL:AL035410
EMBL:AJ132948 IPI:IPI00010252 IPI:IPI00221114 RefSeq:NP_056990.3
RefSeq:NP_148980.2 UniGene:Hs.26837 PDB:3U5M PDBsum:3U5M
ProteinModelPortal:Q9UPN9 SMR:Q9UPN9 DIP:DIP-54262N IntAct:Q9UPN9
STRING:Q9UPN9 PhosphoSite:Q9UPN9 DMDM:12643365 PaxDb:Q9UPN9
PRIDE:Q9UPN9 Ensembl:ENST00000358465 Ensembl:ENST00000369543
GeneID:51592 KEGG:hsa:51592 UCSC:uc001eew.3 UCSC:uc001eex.3
CTD:51592 GeneCards:GC01M114935 H-InvDB:HIX0000910 HGNC:HGNC:16290
HPA:HPA004345 MIM:605769 neXtProt:NX_Q9UPN9 PharmGKB:PA38118
InParanoid:Q9UPN9 KO:K08883 OMA:PIRSLMH OrthoDB:EOG4SN1N0
PhylomeDB:Q9UPN9 ChiTaRS:TRIM33 GenomeRNAi:51592 NextBio:55433
PMAP-CutDB:Q9UPN9 ArrayExpress:Q9UPN9 Bgee:Q9UPN9 CleanEx:HS_TRIM33
Genevestigator:Q9UPN9 GermOnline:ENSG00000197323 Uniprot:Q9UPN9
Length = 1127
Score = 147 (56.8 bits), Expect = 9.9e-07, P = 9.9e-07
Identities = 24/46 (52%), Positives = 27/46 (58%)
Query: 333 DDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCK 378
+D C VC G+LLCCE CP VFHL C P L P DW C C+
Sbjct: 887 EDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFCR 932
>RGD|1307339 [details] [associations]
symbol:Trim33 "tripartite motif-containing 33" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0008150 "biological_process" evidence=ND] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO] [GO:0017015 "regulation of transforming growth factor
beta receptor signaling pathway" evidence=ISO] [GO:0030514
"negative regulation of BMP signaling pathway" evidence=ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0070410 "co-SMAD binding" evidence=ISO]
[GO:0070412 "R-SMAD binding" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF00643
Pfam:PF13639 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00249
SMART:SM00297 SMART:SM00336 SMART:SM00502 RGD:1307339
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR017907 Gene3D:1.20.920.10 SUPFAM:SSF47370
GeneTree:ENSGT00530000062982 IPI:IPI00957392
Ensembl:ENSRNOT00000025600 UCSC:RGD:1307339 NextBio:688291
ArrayExpress:D3ZUM5 Uniprot:D3ZUM5
Length = 1127
Score = 147 (56.8 bits), Expect = 9.9e-07, P = 9.9e-07
Identities = 24/46 (52%), Positives = 27/46 (58%)
Query: 333 DDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCK 378
+D C VC G+LLCCE CP VFHL C P L P DW C C+
Sbjct: 904 EDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFCR 949
>MGI|MGI:2137357 [details] [associations]
symbol:Trim33 "tripartite motif-containing 33" species:10090
"Mus musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0017015 "regulation
of transforming growth factor beta receptor signaling pathway"
evidence=ISO] [GO:0030514 "negative regulation of BMP signaling
pathway" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0070410 "co-SMAD binding" evidence=ISO]
[GO:0070412 "R-SMAD binding" evidence=ISO] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR003649 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF00643 Pfam:PF13639 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
SMART:SM00249 SMART:SM00297 SMART:SM00336 SMART:SM00502
UniPathway:UPA00143 MGI:MGI:2137357 Prosite:PS00518 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0016874
GO:GO:0008270 GO:GO:0006351 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0070412 InterPro:IPR017907
Gene3D:1.20.920.10 SUPFAM:SSF47370 eggNOG:COG5076 GO:GO:0030514
GO:GO:0017015 GO:GO:0070410 HOGENOM:HOG000252971 HOVERGEN:HBG054599
CTD:51592 KO:K08883 OrthoDB:EOG4SN1N0 EMBL:AY458590 EMBL:AK129293
EMBL:AF220138 IPI:IPI00409904 IPI:IPI00480381 RefSeq:NP_001073299.1
RefSeq:NP_444400.2 UniGene:Mm.195036 ProteinModelPortal:Q99PP7
SMR:Q99PP7 DIP:DIP-59674N IntAct:Q99PP7 STRING:Q99PP7
PhosphoSite:Q99PP7 PaxDb:Q99PP7 PRIDE:Q99PP7 GeneID:94093
KEGG:mmu:94093 UCSC:uc008qsv.1 UCSC:uc008qsw.1 InParanoid:Q99PP7
NextBio:352085 Bgee:Q99PP7 CleanEx:MM_TRIM33 Genevestigator:Q99PP7
GermOnline:ENSMUSG00000033014 Uniprot:Q99PP7
Length = 1142
Score = 147 (56.8 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 24/46 (52%), Positives = 27/46 (58%)
Query: 333 DDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCK 378
+D C VC G+LLCCE CP VFHL C P L P DW C C+
Sbjct: 902 EDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFCR 947
>ZFIN|ZDB-GENE-030131-5913 [details] [associations]
symbol:trim24 "tripartite motif-containing 24"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR003649 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF00643 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00249
SMART:SM00297 SMART:SM00336 SMART:SM00502 Prosite:PS00518
ZFIN:ZDB-GENE-030131-5913 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR017907 Gene3D:1.20.920.10 SUPFAM:SSF47370 EMBL:AY598454
IPI:IPI00483547 UniGene:Dr.16482 ProteinModelPortal:Q6E2N2
SMR:Q6E2N2 HOVERGEN:HBG097569 ArrayExpress:Q6E2N2 Uniprot:Q6E2N2
Length = 961
Score = 146 (56.5 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 23/46 (50%), Positives = 28/46 (60%)
Query: 333 DDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCK 378
+D C VC GEL+CC+ CP VFHL C P L P +W C LC+
Sbjct: 697 EDWCAVCQNGGELICCDKCPKVFHLSCHVPSLTASPSGEWYCTLCR 742
>WB|WBGene00002637 [details] [associations]
symbol:let-418 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016818 "hydrolase activity,
acting on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0048557 "embryonic digestive tract
morphogenesis" evidence=IGI] [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=IDA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0008134 "transcription
factor binding" evidence=IPI] [GO:0016581 "NuRD complex"
evidence=ISS] [GO:0040027 "negative regulation of vulval
development" evidence=IMP] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0009792 GO:GO:0040007 GO:GO:0002119 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0000122 GO:GO:0040035
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
PROSITE:PS00598 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 KO:K11643
GO:GO:0048557 HSSP:Q14839 EMBL:AF308445 EMBL:FO080294 PIR:T34239
RefSeq:NP_504523.1 UniGene:Cel.16862 ProteinModelPortal:G5EBZ4
SMR:G5EBZ4 IntAct:G5EBZ4 STRING:Q19815 EnsemblMetazoa:F26F12.7
GeneID:178970 KEGG:cel:CELE_F26F12.7 CTD:178970 WormBase:F26F12.7
OMA:VTQDATE NextBio:903342 Uniprot:G5EBZ4
Length = 1829
Score = 140 (54.3 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 22/52 (42%), Positives = 32/52 (61%)
Query: 331 QYDDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQED-WQCNLCKAHK 381
Q D+ C++C LL C++C FH C+DPPL +VP+E+ W C C+ K
Sbjct: 315 QNDEFCKICKETENLLLCDSCVCSFHAYCIDPPLTEVPKEETWSCPRCETVK 366
Score = 137 (53.3 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 20/48 (41%), Positives = 29/48 (60%)
Query: 333 DDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAH 380
+D+C C + GELL C+TCP +H C+D + + P+ DW C C H
Sbjct: 256 NDYCEECKQDGELLLCDTCPRAYHTVCIDENMEEPPEGDWSCAHCIEH 303
Score = 58 (25.5 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 19/74 (25%), Positives = 39/74 (52%)
Query: 21 KFQVHLLKKPQYLQNLEARGLNSP-ITSRTSSPQGSETSRRSTAKKGTKRKSNPP-TXXX 78
++Q H+ + + +Q +ARG +P +++ P+ + T RS +K +R S+ P +
Sbjct: 142 EYQDHMAAQGKPVQK-QARGSKTPAVSTPVIPPRSAPTKTRSARRK--RRDSDAPDSDQE 198
Query: 79 XXXNQKRKQTLETD 92
K+++ LE D
Sbjct: 199 FEAFIKQQEQLEDD 212
>UNIPROTKB|G5EBZ4 [details] [associations]
symbol:let-418 "Protein let-418" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0009792 GO:GO:0040007 GO:GO:0002119 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0000122 GO:GO:0040035
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
PROSITE:PS00598 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 KO:K11643
GO:GO:0048557 HSSP:Q14839 EMBL:AF308445 EMBL:FO080294 PIR:T34239
RefSeq:NP_504523.1 UniGene:Cel.16862 ProteinModelPortal:G5EBZ4
SMR:G5EBZ4 IntAct:G5EBZ4 STRING:Q19815 EnsemblMetazoa:F26F12.7
GeneID:178970 KEGG:cel:CELE_F26F12.7 CTD:178970 WormBase:F26F12.7
OMA:VTQDATE NextBio:903342 Uniprot:G5EBZ4
Length = 1829
Score = 140 (54.3 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 22/52 (42%), Positives = 32/52 (61%)
Query: 331 QYDDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQED-WQCNLCKAHK 381
Q D+ C++C LL C++C FH C+DPPL +VP+E+ W C C+ K
Sbjct: 315 QNDEFCKICKETENLLLCDSCVCSFHAYCIDPPLTEVPKEETWSCPRCETVK 366
Score = 137 (53.3 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 20/48 (41%), Positives = 29/48 (60%)
Query: 333 DDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAH 380
+D+C C + GELL C+TCP +H C+D + + P+ DW C C H
Sbjct: 256 NDYCEECKQDGELLLCDTCPRAYHTVCIDENMEEPPEGDWSCAHCIEH 303
Score = 58 (25.5 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 19/74 (25%), Positives = 39/74 (52%)
Query: 21 KFQVHLLKKPQYLQNLEARGLNSP-ITSRTSSPQGSETSRRSTAKKGTKRKSNPP-TXXX 78
++Q H+ + + +Q +ARG +P +++ P+ + T RS +K +R S+ P +
Sbjct: 142 EYQDHMAAQGKPVQK-QARGSKTPAVSTPVIPPRSAPTKTRSARRK--RRDSDAPDSDQE 198
Query: 79 XXXNQKRKQTLETD 92
K+++ LE D
Sbjct: 199 FEAFIKQQEQLEDD 212
>UNIPROTKB|O15164 [details] [associations]
symbol:TRIM24 "Transcription intermediary factor 1-alpha"
species:9606 "Homo sapiens" [GO:0004672 "protein kinase activity"
evidence=IEA] [GO:0005719 "nuclear euchromatin" evidence=IEA]
[GO:0005726 "perichromatin fibrils" evidence=IEA] [GO:0008285
"negative regulation of cell proliferation" evidence=IEA]
[GO:0016922 "ligand-dependent nuclear receptor binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0046777 "protein
autophosphorylation" evidence=IEA] [GO:0055074 "calcium ion
homeostasis" evidence=IEA] [GO:0070562 "regulation of vitamin D
receptor signaling pathway" evidence=IEA] [GO:0070577 "histone
acetyl-lysine binding" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0003713 "transcription coactivator activity"
evidence=IDA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0071391 "cellular response to estrogen stimulus" evidence=IDA]
[GO:0034056 "estrogen response element binding" evidence=IDA]
[GO:0008270 "zinc ion binding" evidence=IDA] [GO:0035064
"methylated histone residue binding" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0002039 "p53 binding"
evidence=IPI] [GO:0042981 "regulation of apoptotic process"
evidence=IMP] [GO:0031647 "regulation of protein stability"
evidence=IMP] [GO:0030163 "protein catabolic process" evidence=IMP]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005102
"receptor binding" evidence=TAS] [GO:0006366 "transcription from
RNA polymerase II promoter" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF00643
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00249 SMART:SM00297
SMART:SM00336 SMART:SM00502 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0005829 GO:GO:0005634 Reactome:REACT_116125 GO:GO:0045892
GO:GO:0045893 GO:GO:0008285 GO:GO:0042981 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0005102 GO:GO:0046777
GO:GO:0003682 GO:GO:0004672 GO:GO:0031647 GO:GO:0003713
GO:GO:0006366 GO:GO:0030163 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0005719 GO:GO:0004842 EMBL:CH236950
EMBL:CH471070 GO:GO:0055074 InterPro:IPR017907 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 eggNOG:COG5076 GO:GO:0070577
InterPro:IPR018359 GO:GO:0071391 MIM:188550 Orphanet:146
GO:GO:0034056 PDB:3O34 PDB:3O35 PDB:3O37 PDBsum:3O34 PDBsum:3O35
PDBsum:3O37 PDB:3O36 PDBsum:3O36 GO:GO:0070562 GO:GO:0005726
EMBL:AC013429 EMBL:AF009353 EMBL:AF119042 EMBL:AK075306
EMBL:AC008265 EMBL:BC028689 IPI:IPI00005184 IPI:IPI00184317
RefSeq:NP_003843.3 RefSeq:NP_056989.2 UniGene:Hs.490287 PDB:2YYN
PDB:3O33 PDBsum:2YYN PDBsum:3O33 ProteinModelPortal:O15164
SMR:O15164 DIP:DIP-52713N IntAct:O15164 STRING:O15164
PhosphoSite:O15164 PaxDb:O15164 PRIDE:O15164 DNASU:8805
Ensembl:ENST00000343526 Ensembl:ENST00000415680 GeneID:8805
KEGG:hsa:8805 UCSC:uc003vub.3 UCSC:uc003vuc.3 CTD:8805
GeneCards:GC07P138144 HGNC:HGNC:11812 HPA:HPA043495 MIM:603406
neXtProt:NX_O15164 PharmGKB:PA36519 HOGENOM:HOG000252971
HOVERGEN:HBG054599 InParanoid:O15164 KO:K08881 OMA:FWAQNIF
OrthoDB:EOG4P8FH9 PhylomeDB:O15164 ChiTaRS:TRIM24
EvolutionaryTrace:O15164 GenomeRNAi:8805 NextBio:33028
ArrayExpress:O15164 Bgee:O15164 CleanEx:HS_TRIM24
Genevestigator:O15164 GermOnline:ENSG00000122779 Uniprot:O15164
Length = 1050
Score = 149 (57.5 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 24/46 (52%), Positives = 28/46 (60%)
Query: 333 DDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCK 378
+D C VC GELLCCE CP VFHL C P L + P +W C C+
Sbjct: 826 EDWCAVCQNGGELLCCEKCPKVFHLSCHVPTLTNFPSGEWICTFCR 871
Score = 43 (20.2 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 277 ESDKTFDEEVLNILNTCEYPFTNIEKR 303
+S++ + LN+L+TC NI+ R
Sbjct: 40 DSERGGEAARLNLLDTCAVCHQNIQSR 66
Score = 43 (20.2 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 10/35 (28%), Positives = 15/35 (42%)
Query: 40 GLNSPITSRTSSPQGSETSRRSTAKKGTKRKSNPP 74
GL P+T + P S S +G+ S+ P
Sbjct: 669 GLAGPVTMTSVHPPIRSPSASSVGSRGSSGSSSKP 703
>UNIPROTKB|E2RNG5 [details] [associations]
symbol:LOC609728 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR003649 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF00643 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00249 SMART:SM00297 SMART:SM00336
SMART:SM00502 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR017907 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 OMA:FWAQNIF
GeneTree:ENSGT00530000062982 EMBL:AAEX03010233
Ensembl:ENSCAFT00000006974 Uniprot:E2RNG5
Length = 1052
Score = 149 (57.5 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 24/46 (52%), Positives = 28/46 (60%)
Query: 333 DDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCK 378
+D C VC GELLCCE CP VFHL C P L + P +W C C+
Sbjct: 828 EDWCAVCQNGGELLCCEKCPKVFHLSCHVPTLANFPSGEWICTFCR 873
Score = 43 (20.2 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 277 ESDKTFDEEVLNILNTCEYPFTNIEKR 303
+S++ + LN+L+TC NI+ R
Sbjct: 42 DSERGGEAARLNLLDTCAVCHQNIQSR 68
Score = 43 (20.2 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 10/35 (28%), Positives = 15/35 (42%)
Query: 40 GLNSPITSRTSSPQGSETSRRSTAKKGTKRKSNPP 74
GL P+T + P S S +G+ S+ P
Sbjct: 671 GLAGPVTMTSVHPPIRSPSASSVGSRGSSGSSSKP 705
>UNIPROTKB|F1MP49 [details] [associations]
symbol:TRIM24 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071391 "cellular response to estrogen stimulus"
evidence=IEA] [GO:0070577 "histone acetyl-lysine binding"
evidence=IEA] [GO:0070562 "regulation of vitamin D receptor
signaling pathway" evidence=IEA] [GO:0055074 "calcium ion
homeostasis" evidence=IEA] [GO:0046777 "protein
autophosphorylation" evidence=IEA] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0042981 "regulation of apoptotic process" evidence=IEA]
[GO:0034056 "estrogen response element binding" evidence=IEA]
[GO:0031647 "regulation of protein stability" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0016922
"ligand-dependent nuclear receptor binding" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005726 "perichromatin
fibrils" evidence=IEA] [GO:0005719 "nuclear euchromatin"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0004672 "protein kinase activity" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0002039 "p53
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF00643
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00249 SMART:SM00297
SMART:SM00336 SMART:SM00502 Prosite:PS00518 GO:GO:0005737
GO:GO:0045892 GO:GO:0045893 GO:GO:0008285 GO:GO:0042981
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0046777
GO:GO:0003682 GO:GO:0004672 GO:GO:0031647 GO:GO:0030163
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0005719
GO:GO:0004842 GO:GO:0055074 InterPro:IPR017907 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071391
GO:GO:0034056 GO:GO:0070562 GO:GO:0005726 OMA:FWAQNIF
GeneTree:ENSGT00530000062982 EMBL:DAAA02011697 EMBL:DAAA02011696
IPI:IPI01000481 Ensembl:ENSBTAT00000003151 Uniprot:F1MP49
Length = 1053
Score = 149 (57.5 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 24/46 (52%), Positives = 28/46 (60%)
Query: 333 DDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCK 378
+D C VC GELLCCE CP VFHL C P L + P +W C C+
Sbjct: 829 EDWCAVCQNGGELLCCEKCPKVFHLSCHVPTLANFPSGEWICTFCR 874
Score = 43 (20.2 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 277 ESDKTFDEEVLNILNTCEYPFTNIEKR 303
+S++ + LN+L+TC NI+ R
Sbjct: 40 DSERGGEAARLNLLDTCAVCHQNIQSR 66
Score = 43 (20.2 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 10/35 (28%), Positives = 15/35 (42%)
Query: 40 GLNSPITSRTSSPQGSETSRRSTAKKGTKRKSNPP 74
GL P+T + P S S +G+ S+ P
Sbjct: 672 GLAGPVTMTSVHPPIRSPSASSVGSRGSSGSSSKP 706
>MGI|MGI:109275 [details] [associations]
symbol:Trim24 "tripartite motif-containing 24" species:10090
"Mus musculus" [GO:0002039 "p53 binding" evidence=ISO;IPI]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=ISO;IDA] [GO:0003713 "transcription coactivator
activity" evidence=ISO;IDA] [GO:0004672 "protein kinase activity"
evidence=IDA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005719 "nuclear euchromatin" evidence=IDA]
[GO:0005726 "perichromatin fibrils" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006468 "protein phosphorylation" evidence=IDA]
[GO:0008270 "zinc ion binding" evidence=ISO] [GO:0008285 "negative
regulation of cell proliferation" evidence=IGI;IMP] [GO:0010628
"positive regulation of gene expression" evidence=IGI;IMP]
[GO:0016567 "protein ubiquitination" evidence=ISO;IDA] [GO:0016874
"ligase activity" evidence=IEA] [GO:0016922 "ligand-dependent
nuclear receptor binding" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=ISO;IMP] [GO:0031647 "regulation of
protein stability" evidence=ISO;IMP] [GO:0034056 "estrogen response
element binding" evidence=ISO] [GO:0042981 "regulation of apoptotic
process" evidence=ISO;IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IGI]
[GO:0046777 "protein autophosphorylation" evidence=IDA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0055074 "calcium ion
homeostasis" evidence=IMP] [GO:0070562 "regulation of vitamin D
receptor signaling pathway" evidence=IMP] [GO:0070577 "histone
acetyl-lysine binding" evidence=ISO] [GO:0071391 "cellular response
to estrogen stimulus" evidence=ISO] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR003649 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF00643 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00249
SMART:SM00297 SMART:SM00336 SMART:SM00502 UniPathway:UPA00143
MGI:MGI:109275 Prosite:PS00518 GO:GO:0005737 GO:GO:0045892
GO:GO:0045893 GO:GO:0008285 GO:GO:0042981 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0046777 GO:GO:0006351
GO:GO:0003682 GO:GO:0004672 GO:GO:0031647 GO:GO:0003713
GO:GO:0030163 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0005719 GO:GO:0004842 GO:GO:0055074
InterPro:IPR017907 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 eggNOG:COG5076 GO:GO:0070577 InterPro:IPR018359
GO:GO:0016922 GO:GO:0071391 GO:GO:0034056 GO:GO:0070562
GO:GO:0005726 CTD:8805 HOGENOM:HOG000252971 HOVERGEN:HBG054599
KO:K08881 OMA:FWAQNIF OrthoDB:EOG4P8FH9 ChiTaRS:TRIM24 EMBL:S78221
EMBL:S78219 EMBL:BC056959 IPI:IPI00131130 IPI:IPI00227778
PIR:S55259 RefSeq:NP_001258993.1 RefSeq:NP_659542.3
UniGene:Mm.41063 ProteinModelPortal:Q64127 SMR:Q64127
DIP:DIP-31476N IntAct:Q64127 STRING:Q64127 PhosphoSite:Q64127
PaxDb:Q64127 PRIDE:Q64127 Ensembl:ENSMUST00000031859
Ensembl:ENSMUST00000120428 GeneID:21848 KEGG:mmu:21848
UCSC:uc009bjk.1 UCSC:uc009bjl.1 GeneTree:ENSGT00530000062982
InParanoid:Q64127 NextBio:301326 Bgee:Q64127 CleanEx:MM_TRIM24
Genevestigator:Q64127 GermOnline:ENSMUSG00000029833 Uniprot:Q64127
Length = 1051
Score = 148 (57.2 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 24/46 (52%), Positives = 28/46 (60%)
Query: 333 DDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCK 378
+D C VC GELLCCE CP VFHL C P L + P +W C C+
Sbjct: 827 EDWCAVCQNGGELLCCEKCPKVFHLTCHVPTLTNFPSGEWICTFCR 872
Score = 43 (20.2 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 9/28 (32%), Positives = 16/28 (57%)
Query: 277 ESDKTFDEEVLNILNTCEYPFTNIEKRL 304
+S+ + LN+L+TC NI+ R+
Sbjct: 36 DSESGGEASRLNLLDTCAVCHQNIQSRV 63
Score = 43 (20.2 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 10/35 (28%), Positives = 15/35 (42%)
Query: 40 GLNSPITSRTSSPQGSETSRRSTAKKGTKRKSNPP 74
GL P+T + P S S +G+ S+ P
Sbjct: 670 GLAGPVTMTSVHPPIRSPSASSVGSRGSSGSSSKP 704
>UNIPROTKB|D4AB82 [details] [associations]
symbol:Trim24 "Protein Trim24" species:10116 "Rattus
norvegicus" [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR003649 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF00643 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00249
SMART:SM00297 SMART:SM00336 SMART:SM00502 RGD:1560596
Prosite:PS00518 GO:GO:0005737 GO:GO:0045892 GO:GO:0045893
GO:GO:0008285 GO:GO:0042981 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0046777 GO:GO:0003682 GO:GO:0004672
GO:GO:0031647 GO:GO:0030163 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0005719 GO:GO:0004842 GO:GO:0055074
InterPro:IPR017907 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071391 GO:GO:0034056
GO:GO:0070562 GO:GO:0005726 OrthoDB:EOG4P8FH9 IPI:IPI00566577
Ensembl:ENSRNOT00000017848 ArrayExpress:D4AB82 Uniprot:D4AB82
Length = 1048
Score = 146 (56.5 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 24/46 (52%), Positives = 27/46 (58%)
Query: 333 DDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCK 378
+D C VC GELLCCE CP VFHL C P L P +W C C+
Sbjct: 825 EDWCAVCQNGGELLCCEKCPKVFHLTCHVPTLTHFPSGEWICTFCR 870
Score = 45 (20.9 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 14/60 (23%), Positives = 24/60 (40%)
Query: 15 PNTERPKFQVHLLKKPQYLQNLEARGLNSPITSRTSSPQGSETSRRSTAKKGTKRKSNPP 74
P RP ++ P ++ + GL P+T + P S S +G+ S+ P
Sbjct: 646 PGQPRPPSN-RTVQSPN--SSVPSPGLAGPVTMTSVHPPIRSPSASSVGSRGSSGSSSKP 702
Score = 42 (19.8 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 287 LNILNTCEYPFTNIEKRL 304
LN+L+TC NI+ R+
Sbjct: 46 LNLLDTCAVCHQNIQSRV 63
>UNIPROTKB|O15016 [details] [associations]
symbol:TRIM66 "Tripartite motif-containing protein 66"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0016235 "aggresome" evidence=IDA]
InterPro:IPR000315 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR003649 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF00643 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50119
SMART:SM00249 SMART:SM00297 SMART:SM00502 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0016235 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 eggNOG:COG5076 EMBL:AJ400879 EMBL:AC091053
EMBL:AB002296 EMBL:AC104360 IPI:IPI00004420 IPI:IPI00941834
RefSeq:NP_055633.1 UniGene:Hs.130836 ProteinModelPortal:O15016
SMR:O15016 STRING:O15016 PhosphoSite:O15016 PaxDb:O15016
PRIDE:O15016 Ensembl:ENST00000299550 GeneID:9866 KEGG:hsa:9866
UCSC:uc010rbo.2 CTD:9866 GeneCards:GC11M008595 H-InvDB:HIX0201585
HGNC:HGNC:29005 HPA:HPA027420 MIM:612000 neXtProt:NX_O15016
PharmGKB:PA134954583 HOGENOM:HOG000074104 HOVERGEN:HBG057849
KO:K12032 GenomeRNAi:9866 NextBio:37189 ArrayExpress:O15016
Bgee:O15016 CleanEx:HS_TRIM66 Genevestigator:O15016
GermOnline:ENSG00000166436 Uniprot:O15016
Length = 1216
Score = 146 (56.5 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 24/47 (51%), Positives = 29/47 (61%)
Query: 333 DDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKA 379
+D C VC GELLCC+ CP VFHL C P L P +W C LC++
Sbjct: 970 EDFCAVCLNGGELLCCDRCPKVFHLSCHVPALLSFPGGEWVCTLCRS 1016
Score = 46 (21.3 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 15/59 (25%), Positives = 27/59 (45%)
Query: 18 ERPKFQVHLLKKPQYLQNLEARGLNSPITSRTSSP---QGSETSRRSTAKKGTKRKSNP 73
++P Q+ K PQ+LQ +N + R +P Q E + ++T + + S P
Sbjct: 528 QQPSLQLSQTKSPQHLQQTIVGQINYIV--RQPAPVQSQSQEETLQATDEPPASQGSKP 584
>UNIPROTKB|B5MCJ9 [details] [associations]
symbol:TRIM66 "Tripartite motif-containing protein 66"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0010369 "chromocenter" evidence=IEA] [GO:0042803
"protein homodimerization activity" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0016235 "aggresome" evidence=IDA]
InterPro:IPR000315 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR003649 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF00643 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50119
SMART:SM00249 SMART:SM00297 SMART:SM00336 SMART:SM00502
GO:GO:0005634 GO:GO:0045892 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0016235
Gene3D:1.20.920.10 SUPFAM:SSF47370 GO:GO:0010369 EMBL:AC091053
EMBL:AC104360 IPI:IPI00941834 HGNC:HGNC:29005 HOGENOM:HOG000074104
HOVERGEN:HBG057849 ProteinModelPortal:B5MCJ9 SMR:B5MCJ9
STRING:B5MCJ9 PRIDE:B5MCJ9 Ensembl:ENST00000402157 OMA:HMENERA
OrthoDB:EOG42V8FR ArrayExpress:B5MCJ9 Bgee:B5MCJ9 Uniprot:B5MCJ9
Length = 1245
Score = 146 (56.5 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 24/47 (51%), Positives = 29/47 (61%)
Query: 333 DDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKA 379
+D C VC GELLCC+ CP VFHL C P L P +W C LC++
Sbjct: 999 EDFCAVCLNGGELLCCDRCPKVFHLSCHVPALLSFPGGEWVCTLCRS 1045
Score = 46 (21.3 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 15/59 (25%), Positives = 27/59 (45%)
Query: 18 ERPKFQVHLLKKPQYLQNLEARGLNSPITSRTSSP---QGSETSRRSTAKKGTKRKSNP 73
++P Q+ K PQ+LQ +N + R +P Q E + ++T + + S P
Sbjct: 526 QQPSLQLSQTKSPQHLQQTIVGQINYIV--RQPAPVQSQSQEETLQATDEPPASQGSKP 582
>UNIPROTKB|Q9HB58 [details] [associations]
symbol:SP110 "Sp110 nuclear body protein" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0019048 "virus-host
interaction" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=TAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0007165 "signal transduction"
evidence=TAS] InterPro:IPR000770 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR004865 InterPro:IPR019787
Pfam:PF01342 Pfam:PF03172 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50864 PROSITE:PS51414 SMART:SM00249 SMART:SM00258
SMART:SM00297 GO:GO:0019048 GO:GO:0005730 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 EMBL:CH471063 GO:GO:0008270
GO:GO:0006351 GO:GO:0004871 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR019786 PROSITE:PS01359 Gene3D:3.10.390.10
InterPro:IPR010919 SUPFAM:SSF63763 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 HOGENOM:HOG000089984 EMBL:AC009950
HOVERGEN:HBG006294 EMBL:L22342 EMBL:L22343 EMBL:AF280094
EMBL:AF280095 EMBL:AK026488 EMBL:BC019059 IPI:IPI00162549
IPI:IPI00220746 IPI:IPI00398959 IPI:IPI00472430 IPI:IPI00873254
IPI:IPI00913939 PIR:A49515 RefSeq:NP_001171944.1 RefSeq:NP_004500.3
RefSeq:NP_536349.2 UniGene:Hs.145150 ProteinModelPortal:Q9HB58
SMR:Q9HB58 IntAct:Q9HB58 MINT:MINT-1401836 STRING:Q9HB58
PhosphoSite:Q9HB58 DMDM:209572781 PaxDb:Q9HB58 PRIDE:Q9HB58
DNASU:3431 Ensembl:ENST00000258381 Ensembl:ENST00000258382
Ensembl:ENST00000358662 GeneID:3431 KEGG:hsa:3431 UCSC:uc002vqg.3
UCSC:uc002vqh.3 UCSC:uc010fxj.3 UCSC:uc010fxk.3 CTD:3431
GeneCards:GC02M230997 HGNC:HGNC:5401 HPA:HPA047036 MIM:235550
MIM:604457 neXtProt:NX_Q9HB58 Orphanet:79124 PharmGKB:PA35104
eggNOG:NOG306672 OMA:DGTSEMN GenomeRNAi:3431 NextBio:13528
ArrayExpress:Q9HB58 Bgee:Q9HB58 CleanEx:HS_SP110
Genevestigator:Q9HB58 GermOnline:ENSG00000135899 Uniprot:Q9HB58
Length = 689
Score = 139 (54.0 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 23/55 (41%), Positives = 32/55 (58%)
Query: 334 DHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHKVTGVTDC 388
D C VC + G+LLCC TCP VFH +C PP+ + + W C C+ + +G C
Sbjct: 535 DECEVCCQGGQLLCCGTCPRVFHEDCHIPPV-EAKRMLWSCTFCRMKRSSGSQQC 588
Score = 47 (21.6 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 13/29 (44%), Positives = 15/29 (51%)
Query: 42 NSPITSRTSSPQGSETSRRSTAKKGTKRK 70
NSP + PQ E S + KKG KRK
Sbjct: 255 NSPEPNDPEEPQ--EVSSTPSDKKGKKRK 281
>UNIPROTKB|F1NBP6 [details] [associations]
symbol:F1NBP6 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0010369 "chromocenter"
evidence=IEA] [GO:0016235 "aggresome" evidence=IEA] [GO:0042803
"protein homodimerization activity" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR003649 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF00643 PROSITE:PS50014
PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
SMART:SM00249 SMART:SM00297 SMART:SM00336 SMART:SM00502
Prosite:PS00518 GO:GO:0005634 GO:GO:0045892 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0016235 InterPro:IPR017907 Gene3D:1.20.920.10
SUPFAM:SSF47370 GO:GO:0010369 GeneTree:ENSGT00530000062982
OMA:HMENERA EMBL:AADN02030565 IPI:IPI00595769
Ensembl:ENSGALT00000009581 Uniprot:F1NBP6
Length = 1025
Score = 144 (55.7 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 24/46 (52%), Positives = 28/46 (60%)
Query: 333 DDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCK 378
+D C VC GELLCC+ CP VFHL C P L P +W C LC+
Sbjct: 783 EDFCAVCLNGGELLCCDHCPKVFHLSCHVPALLSFPVGEWVCTLCR 828
>UNIPROTKB|E1BJG5 [details] [associations]
symbol:E1BJG5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070087 "chromo shadow domain binding" evidence=IEA]
[GO:0060669 "embryonic placenta morphogenesis" evidence=IEA]
[GO:0060028 "convergent extension involved in axis elongation"
evidence=IEA] [GO:0051259 "protein oligomerization" evidence=IEA]
[GO:0046777 "protein autophosphorylation" evidence=IEA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045739 "positive regulation of DNA repair" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0005720 "nuclear heterochromatin"
evidence=IEA] [GO:0005719 "nuclear euchromatin" evidence=IEA]
[GO:0005654 "nucleoplasm" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0003713 "transcription
coactivator activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0001837 "epithelial to mesenchymal transition" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00628 Pfam:PF00643 PROSITE:PS50016
PROSITE:PS50119 SMART:SM00249 SMART:SM00297 SMART:SM00336
SMART:SM00502 GO:GO:0051259 GO:GO:0003714 GO:GO:0045893
GO:GO:0005654 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0006281 GO:GO:0005720 GO:GO:0003700 GO:GO:0046777
GO:GO:0000122 GO:GO:0004672 GO:GO:0003713 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0005719 GO:GO:0004842
GO:GO:0001837 GO:GO:0045739 Gene3D:1.20.920.10 GO:GO:0060028
GO:GO:0060669 GeneTree:ENSGT00530000062982 OMA:PGMAIVK
EMBL:DAAA02047920 EMBL:DAAA02047921 IPI:IPI01018577
Ensembl:ENSBTAT00000008424 Uniprot:E1BJG5
Length = 814
Score = 141 (54.7 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 22/42 (52%), Positives = 29/42 (69%)
Query: 336 CRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLC 377
CRVC + G+L+ C C FHL+C P L+DVP E+W C+LC
Sbjct: 607 CRVCQKPGDLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLC 648
>UNIPROTKB|F1NX04 [details] [associations]
symbol:PHF12 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0001106
"RNA polymerase II transcription corepressor activity"
evidence=IEA] [GO:0001222 "transcription corepressor binding"
evidence=IEA] [GO:0016580 "Sin3 complex" evidence=IEA] [GO:0017053
"transcriptional repressor complex" evidence=IEA] [GO:0035091
"phosphatidylinositol binding" evidence=IEA] InterPro:IPR000253
InterPro:IPR001965 InterPro:IPR008984 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50006 PROSITE:PS50016 SMART:SM00240
SMART:SM00249 GO:GO:0017053 GO:GO:0046872 GO:GO:0008270
Gene3D:2.60.200.20 SUPFAM:SSF49879 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0035091 GO:GO:0001106
GO:GO:0016580 OMA:MSSQAQG GeneTree:ENSGT00440000033777
EMBL:AADN02025853 IPI:IPI00589363 Ensembl:ENSGALT00000006417
Uniprot:F1NX04
Length = 1007
Score = 142 (55.0 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 334 DHCRVCHRVGELLCCETCPAVFHLECVDPPLRD--VPQEDWQCNLCKAHK 381
D C C G+LLCC+ CPA FHL+C +PPL + +P +W C+ C +
Sbjct: 55 DSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCTVRR 104
>UNIPROTKB|F1PJT2 [details] [associations]
symbol:TRIM28 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR003649 InterPro:IPR019787 Pfam:PF00628 Pfam:PF00643
PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
SMART:SM00249 SMART:SM00297 SMART:SM00336 SMART:SM00502
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.20.920.10
GeneTree:ENSGT00530000062982 OMA:PGMAIVK EMBL:AAEX03000691
EMBL:AAEX03000690 Ensembl:ENSCAFT00000003688 Uniprot:F1PJT2
Length = 834
Score = 141 (54.7 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 22/42 (52%), Positives = 29/42 (69%)
Query: 336 CRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLC 377
CRVC + G+L+ C C FHL+C P L+DVP E+W C+LC
Sbjct: 627 CRVCQKPGDLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLC 668
>MGI|MGI:109274 [details] [associations]
symbol:Trim28 "tripartite motif-containing 28" species:10090
"Mus musculus" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IGI;IDA] [GO:0000785
"chromatin" evidence=IDA] [GO:0001837 "epithelial to mesenchymal
transition" evidence=IDA] [GO:0003677 "DNA binding" evidence=ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0003714 "transcription corepressor
activity" evidence=ISO] [GO:0004672 "protein kinase activity"
evidence=IDA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005654 "nucleoplasm" evidence=IDA]
[GO:0005719 "nuclear euchromatin" evidence=IDA] [GO:0005720
"nuclear heterochromatin" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0006281 "DNA repair" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006468 "protein phosphorylation" evidence=IDA] [GO:0008270
"zinc ion binding" evidence=ISO] [GO:0016567 "protein
ubiquitination" evidence=ISO] [GO:0016874 "ligase activity"
evidence=IEA] [GO:0016925 "protein sumoylation" evidence=ISO]
[GO:0031625 "ubiquitin protein ligase binding" evidence=ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0045739 "positive regulation of DNA repair" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO;IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0046777 "protein
autophosphorylation" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051259 "protein oligomerization" evidence=ISO]
[GO:0060028 "convergent extension involved in axis elongation"
evidence=IMP] [GO:0060669 "embryonic placenta morphogenesis"
evidence=IMP] [GO:0070087 "chromo shadow domain binding"
evidence=ISO] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00628 Pfam:PF00643 PROSITE:PS50014
PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
SMART:SM00249 SMART:SM00297 SMART:SM00336 SMART:SM00502
UniPathway:UPA00886 MGI:MGI:109274 Prosite:PS00518 GO:GO:0051259
GO:GO:0003714 GO:GO:0045893 GO:GO:0005654 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006281 GO:GO:0005720
GO:GO:0046777 GO:GO:0006351 GO:GO:0000122 GO:GO:0004672
GO:GO:0003713 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0005719 GO:GO:0004842 GO:GO:0001837
GO:GO:0045739 Gene3D:1.20.920.10 PROSITE:PS00633 GO:GO:0016925
GO:GO:0060028 GO:GO:0060669 GeneTree:ENSGT00530000062982 CTD:10155
eggNOG:NOG284491 HOGENOM:HOG000137674 HOVERGEN:HBG055353 KO:K08882
OMA:PGMAIVK OrthoDB:EOG4320XK EMBL:X99644 EMBL:U67303 EMBL:AF230878
EMBL:AF230391 EMBL:AF230392 EMBL:BC058391 EMBL:AK089084
IPI:IPI00312128 IPI:IPI00453895 RefSeq:NP_035718.2 UniGene:Mm.15701
UniGene:Mm.398345 ProteinModelPortal:Q62318 SMR:Q62318
DIP:DIP-31477N IntAct:Q62318 STRING:Q62318 PhosphoSite:Q62318
REPRODUCTION-2DPAGE:IPI00312128 REPRODUCTION-2DPAGE:Q62318
PaxDb:Q62318 PRIDE:Q62318 Ensembl:ENSMUST00000005705 GeneID:21849
KEGG:mmu:21849 InParanoid:Q62318 ChiTaRS:TRIM28 NextBio:301330
PMAP-CutDB:Q62318 Bgee:Q62318 CleanEx:MM_TRIM28
Genevestigator:Q62318 GermOnline:ENSMUSG00000005566 Uniprot:Q62318
Length = 834
Score = 141 (54.7 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 22/42 (52%), Positives = 29/42 (69%)
Query: 336 CRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLC 377
CRVC + G+L+ C C FHL+C P L+DVP E+W C+LC
Sbjct: 628 CRVCQKPGDLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLC 669
>UNIPROTKB|Q13263 [details] [associations]
symbol:TRIM28 "Transcription intermediary factor 1-beta"
species:9606 "Homo sapiens" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=IEA]
[GO:0004672 "protein kinase activity" evidence=IEA] [GO:0005719
"nuclear euchromatin" evidence=IEA] [GO:0005720 "nuclear
heterochromatin" evidence=IEA] [GO:0046777 "protein
autophosphorylation" evidence=IEA] [GO:0060028 "convergent
extension involved in axis elongation" evidence=IEA] [GO:0060669
"embryonic placenta morphogenesis" evidence=IEA] [GO:0016925
"protein sumoylation" evidence=IEA;IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0003677 "DNA
binding" evidence=IDA] [GO:0005634 "nucleus" evidence=ISS;IDA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IDA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
[GO:0003714 "transcription corepressor activity" evidence=IDA]
[GO:0045739 "positive regulation of DNA repair" evidence=IDA]
[GO:0006281 "DNA repair" evidence=IDA] [GO:0051259 "protein
oligomerization" evidence=IDA] [GO:0008270 "zinc ion binding"
evidence=IDA] [GO:0001837 "epithelial to mesenchymal transition"
evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=ISS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006367 "transcription
initiation from RNA polymerase II promoter" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0070087 "chromo
shadow domain binding" evidence=IPI] [GO:0016567 "protein
ubiquitination" evidence=IDA] Reactome:REACT_71 InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR003649 InterPro:IPR019787 Pfam:PF00628 Pfam:PF00643
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00249 SMART:SM00297 SMART:SM00336
SMART:SM00502 UniPathway:UPA00886 Prosite:PS00518 GO:GO:0051259
GO:GO:0003714 GO:GO:0045892 GO:GO:0045893 GO:GO:0005654
GO:GO:0046872 GO:GO:0003677 GO:GO:0043565 GO:GO:0008270
GO:GO:0006281 GO:GO:0005720 GO:GO:0003700 GO:GO:0046777
GO:GO:0000122 GO:GO:0004672 GO:GO:0003713 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0005719 GO:GO:0004842
GO:GO:0001837 GO:GO:0006367 GO:GO:0045739 GO:GO:0031625
Gene3D:1.20.920.10 PROSITE:PS00633 GO:GO:0016925 GO:GO:0060028
GO:GO:0060669 EMBL:U78773 EMBL:X97548 EMBL:U95040 EMBL:BC004978
EMBL:BC007390 EMBL:BC052986 EMBL:U31657 IPI:IPI00438229
IPI:IPI00438230 PIR:G01950 RefSeq:NP_005753.1 UniGene:Hs.467408
PDB:1FP0 PDB:2RO1 PDB:2YVR PDBsum:1FP0 PDBsum:2RO1 PDBsum:2YVR
ProteinModelPortal:Q13263 SMR:Q13263 DIP:DIP-30891N IntAct:Q13263
MINT:MINT-5001244 STRING:Q13263 PhosphoSite:Q13263 DMDM:3183179
PaxDb:Q13263 PeptideAtlas:Q13263 PRIDE:Q13263 DNASU:10155
Ensembl:ENST00000253024 Ensembl:ENST00000341753 GeneID:10155
KEGG:hsa:10155 UCSC:uc002qtg.1 UCSC:uc010eut.1 CTD:10155
GeneCards:GC19P059055 HGNC:HGNC:16384 HPA:CAB010066 MIM:601742
neXtProt:NX_Q13263 PharmGKB:PA38131 eggNOG:NOG284491
HOGENOM:HOG000137674 HOVERGEN:HBG055353 InParanoid:Q13263 KO:K08882
OMA:PGMAIVK OrthoDB:EOG4320XK PhylomeDB:Q13263
EvolutionaryTrace:Q13263 GenomeRNAi:10155 NextBio:38440
PMAP-CutDB:Q13263 Bgee:Q13263 CleanEx:HS_TRIM28
Genevestigator:Q13263 GermOnline:ENSG00000130726 Uniprot:Q13263
Length = 835
Score = 141 (54.7 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 22/42 (52%), Positives = 29/42 (69%)
Query: 336 CRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLC 377
CRVC + G+L+ C C FHL+C P L+DVP E+W C+LC
Sbjct: 628 CRVCQKPGDLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLC 669
>RGD|620289 [details] [associations]
symbol:Trim28 "tripartite motif-containing 28" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0000785 "chromatin" evidence=ISO] [GO:0001837 "epithelial to
mesenchymal transition" evidence=ISO;ISS] [GO:0003677 "DNA binding"
evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO;ISS] [GO:0003713
"transcription coactivator activity" evidence=IEA;ISO] [GO:0003714
"transcription corepressor activity" evidence=IEA;ISO] [GO:0004672
"protein kinase activity" evidence=IEA;ISO] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;ISO] [GO:0005634
"nucleus" evidence=ISO;ISS] [GO:0005654 "nucleoplasm"
evidence=IEA;ISO] [GO:0005719 "nuclear euchromatin"
evidence=IEA;ISO] [GO:0005720 "nuclear heterochromatin"
evidence=IEA;ISO] [GO:0006281 "DNA repair" evidence=IEA;ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006468 "protein phosphorylation" evidence=ISO] [GO:0008270
"zinc ion binding" evidence=IEA;ISO] [GO:0016567 "protein
ubiquitination" evidence=ISO] [GO:0016925 "protein sumoylation"
evidence=IEA;ISO] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=ISO;ISS] [GO:0045739 "positive regulation of DNA repair"
evidence=IEA;ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO;ISS]
[GO:0046777 "protein autophosphorylation" evidence=IEA;ISO]
[GO:0051259 "protein oligomerization" evidence=IEA;ISO] [GO:0060028
"convergent extension involved in axis elongation"
evidence=IEA;ISO] [GO:0060669 "embryonic placenta morphogenesis"
evidence=IEA;ISO] [GO:0070087 "chromo shadow domain binding"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR003649 InterPro:IPR019787
Pfam:PF00628 Pfam:PF00643 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00249
SMART:SM00297 SMART:SM00336 SMART:SM00502 UniPathway:UPA00886
RGD:620289 Prosite:PS00518 GO:GO:0005634 GO:GO:0045893
GO:GO:0046872 GO:GO:0016874 GO:GO:0008270 GO:GO:0006351
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0001837
Gene3D:1.20.920.10 PROSITE:PS00633 GO:GO:0016925
GeneTree:ENSGT00530000062982 CTD:10155 eggNOG:NOG284491
HOGENOM:HOG000137674 HOVERGEN:HBG055353 KO:K08882 OrthoDB:EOG4320XK
EMBL:BC166843 EMBL:U95041 IPI:IPI00194567 RefSeq:NP_446368.1
UniGene:Rn.198494 ProteinModelPortal:O08629 SMR:O08629
STRING:O08629 PhosphoSite:O08629 PRIDE:O08629
Ensembl:ENSRNOT00000029996 GeneID:116698 KEGG:rno:116698
UCSC:RGD:620289 InParanoid:O08629 NextBio:619598
Genevestigator:O08629 GermOnline:ENSRNOG00000027487 Uniprot:O08629
Length = 835
Score = 141 (54.7 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 22/42 (52%), Positives = 29/42 (69%)
Query: 336 CRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLC 377
CRVC + G+L+ C C FHL+C P L+DVP E+W C+LC
Sbjct: 629 CRVCQKPGDLVMCNQCEFCFHLDCHLPSLQDVPGEEWSCSLC 670
>CGD|CAL0003038 [details] [associations]
symbol:orf19.6506 species:5476 "Candida albicans" [GO:0032221
"Rpd3S complex" evidence=IEA] [GO:0033698 "Rpd3L complex"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0006368 "transcription elongation from RNA
polymerase II promoter" evidence=IEA] [GO:0060195 "negative
regulation of antisense RNA transcription" evidence=IEA]
[GO:0030174 "regulation of DNA-dependent DNA replication
initiation" evidence=IEA] [GO:0016575 "histone deacetylation"
evidence=IEA] InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628
PROSITE:PS50016 SMART:SM00249 CGD:CAL0003038 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 EMBL:AACQ01000020 EMBL:AACQ01000016
eggNOG:NOG145066 RefSeq:XP_720831.1 RefSeq:XP_721344.1
RefSeq:XP_888831.1 ProteinModelPortal:Q5AH34 GeneID:3637022
GeneID:3637451 GeneID:3703842 KEGG:cal:CaO19.13859
KEGG:cal:CaO19.6506 KEGG:cal:CaO19_6506 Uniprot:Q5AH34
Length = 688
Score = 146 (56.5 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 22/50 (44%), Positives = 28/50 (56%)
Query: 333 DDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLC--KAH 380
DD C C G +CCE CP FH C DPP+ + P+++W C C K H
Sbjct: 270 DDFCFACGMPGIFICCEKCPKSFHFTCCDPPIEEAPEDEWYCRECYTKVH 319
Score = 37 (18.1 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 53 QGSETSRRSTAKKGTKRKSN 72
+ S++SR STA G + +N
Sbjct: 130 KSSDSSRESTATPGDEIDTN 149
>UNIPROTKB|H0YEK2 [details] [associations]
symbol:PHF21A "PHD finger protein 21A" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 EMBL:AC068385
HGNC:HGNC:24156 EMBL:AC024475 EMBL:AC129913 Ensembl:ENST00000530587
Bgee:H0YEK2 Uniprot:H0YEK2
Length = 116
Score = 115 (45.5 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 345 LLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCK 378
LL C+TC V+HL+C+DPPL+ +P+ W C C+
Sbjct: 1 LLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQ 34
>UNIPROTKB|F8W6B8 [details] [associations]
symbol:SP140 "Nuclear body protein SP140" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000770 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR004865 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF01342 Pfam:PF03172 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50864 PROSITE:PS51414 SMART:SM00249 SMART:SM00258
SMART:SM00297 GO:GO:0005737 GO:GO:0005730 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:3.10.390.10 InterPro:IPR010919
SUPFAM:SSF63763 Gene3D:1.20.920.10 SUPFAM:SSF47370 EMBL:AC009949
EMBL:AC009950 HGNC:HGNC:17133 ChiTaRS:SP140 IPI:IPI01025902
ProteinModelPortal:F8W6B8 SMR:F8W6B8 PRIDE:F8W6B8
Ensembl:ENST00000350136 ArrayExpress:F8W6B8 Bgee:F8W6B8
Uniprot:F8W6B8
Length = 736
Score = 140 (54.3 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 26/72 (36%), Positives = 36/72 (50%)
Query: 334 DHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHKVTGVTDCLPDVE 393
D C VC GEL CC+TC VFH +C PP+ + + W C C+ + G C + E
Sbjct: 560 DECEVCRDGGELFCCDTCSRVFHEDCHIPPV-EAERTPWNCIFCRMKESPGSQQCCQESE 618
Query: 394 K-SGLLCRQEHL 404
+C +E L
Sbjct: 619 VLERQMCPEEQL 630
>WB|WBGene00000482 [details] [associations]
symbol:chd-3 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016818 "hydrolase activity,
acting on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=TAS]
[GO:0040027 "negative regulation of vulval development"
evidence=IMP] [GO:0046580 "negative regulation of Ras protein
signal transduction" evidence=IMP] [GO:0001709 "cell fate
determination" evidence=IMP] [GO:0000118 "histone deacetylase
complex" evidence=ISS] [GO:0003682 "chromatin binding"
evidence=TAS] [GO:0003678 "DNA helicase activity" evidence=ISS]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003682 GO:GO:0006338
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0001709 GO:GO:0046580 GO:GO:0008026 InterPro:IPR023780
PROSITE:PS00598 GO:GO:0000118 GeneTree:ENSGT00560000076896
EMBL:AF308444 EMBL:Z67884 EMBL:Z67881 PIR:T20160 RefSeq:NP_510140.1
UniGene:Cel.16950 ProteinModelPortal:Q22516 SMR:Q22516
STRING:Q22516 PaxDb:Q22516 EnsemblMetazoa:T14G8.1 GeneID:181421
KEGG:cel:CELE_T14G8.1 UCSC:T14G8.1 CTD:181421 WormBase:T14G8.1
HOGENOM:HOG000231124 InParanoid:Q22516 OMA:INIIMEL NextBio:913870
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
Uniprot:Q22516
Length = 1787
Score = 151 (58.2 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 19/44 (43%), Positives = 30/44 (68%)
Query: 334 DHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLC 377
D+CR+C +L C+TCP+ +H C+DPPL ++P+ +W C C
Sbjct: 329 DYCRICKETSNILLCDTCPSSYHAYCIDPPLTEIPEGEWSCPRC 372
Score = 136 (52.9 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 18/49 (36%), Positives = 31/49 (63%)
Query: 332 YDDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAH 380
+ ++C VC++ GEL+ C+TC +H+ C+D + P+ DW C C+ H
Sbjct: 264 HQENCEVCNQDGELMLCDTCTRAYHVACIDENMEQPPEGDWSCPHCEEH 312
Score = 41 (19.5 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 11/36 (30%), Positives = 19/36 (52%)
Query: 37 EARGLNSPITSRTSSPQGSETSRRSTAKKGTKRKSN 72
E++G+ P TS P ++ KK +K+K+N
Sbjct: 43 ESQGV--PTTSEKKKPP---PKKKKGGKKSSKKKNN 73
>UNIPROTKB|Q22516 [details] [associations]
symbol:chd-3 "Chromodomain-helicase-DNA-binding protein 3
homolog" species:6239 "Caenorhabditis elegans" [GO:0032508 "DNA
duplex unwinding" evidence=ISS] InterPro:IPR001841
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR012957
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
SMART:SM00249 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003682 GO:GO:0006338 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0001709 GO:GO:0046580
GO:GO:0008026 InterPro:IPR023780 PROSITE:PS00598 GO:GO:0000118
GeneTree:ENSGT00560000076896 EMBL:AF308444 EMBL:Z67884 EMBL:Z67881
PIR:T20160 RefSeq:NP_510140.1 UniGene:Cel.16950
ProteinModelPortal:Q22516 SMR:Q22516 STRING:Q22516 PaxDb:Q22516
EnsemblMetazoa:T14G8.1 GeneID:181421 KEGG:cel:CELE_T14G8.1
UCSC:T14G8.1 CTD:181421 WormBase:T14G8.1 HOGENOM:HOG000231124
InParanoid:Q22516 OMA:INIIMEL NextBio:913870 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 Uniprot:Q22516
Length = 1787
Score = 151 (58.2 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 19/44 (43%), Positives = 30/44 (68%)
Query: 334 DHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLC 377
D+CR+C +L C+TCP+ +H C+DPPL ++P+ +W C C
Sbjct: 329 DYCRICKETSNILLCDTCPSSYHAYCIDPPLTEIPEGEWSCPRC 372
Score = 136 (52.9 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 18/49 (36%), Positives = 31/49 (63%)
Query: 332 YDDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAH 380
+ ++C VC++ GEL+ C+TC +H+ C+D + P+ DW C C+ H
Sbjct: 264 HQENCEVCNQDGELMLCDTCTRAYHVACIDENMEQPPEGDWSCPHCEEH 312
Score = 41 (19.5 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 11/36 (30%), Positives = 19/36 (52%)
Query: 37 EARGLNSPITSRTSSPQGSETSRRSTAKKGTKRKSN 72
E++G+ P TS P ++ KK +K+K+N
Sbjct: 43 ESQGV--PTTSEKKKPP---PKKKKGGKKSSKKKNN 73
>UNIPROTKB|E7ESH9 [details] [associations]
symbol:SP140 "Nuclear body protein SP140" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000770 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR004865 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF01342 Pfam:PF03172 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50864 PROSITE:PS51414 SMART:SM00249 SMART:SM00258
SMART:SM00297 GO:GO:0005737 GO:GO:0005730 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:3.10.390.10 InterPro:IPR010919
SUPFAM:SSF63763 Gene3D:1.20.920.10 SUPFAM:SSF47370 EMBL:AC009949
EMBL:AC009950 HGNC:HGNC:17133 ChiTaRS:SP140 IPI:IPI01025902
ProteinModelPortal:E7ESH9 SMR:E7ESH9 Ensembl:ENST00000417495
ArrayExpress:E7ESH9 Bgee:E7ESH9 Uniprot:E7ESH9
Length = 753
Score = 140 (54.3 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 26/72 (36%), Positives = 36/72 (50%)
Query: 334 DHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHKVTGVTDCLPDVE 393
D C VC GEL CC+TC VFH +C PP+ + + W C C+ + G C + E
Sbjct: 577 DECEVCRDGGELFCCDTCSRVFHEDCHIPPV-EAERTPWNCIFCRMKESPGSQQCCQESE 635
Query: 394 K-SGLLCRQEHL 404
+C +E L
Sbjct: 636 VLERQMCPEEQL 647
>UNIPROTKB|E9PTL0 [details] [associations]
symbol:Zmynd8 "Protein Zmynd8" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR002893
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF01753
PRINTS:PR00503 PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50865 SMART:SM00249 SMART:SM00297 Pfam:PF00855
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 InterPro:IPR021931 Pfam:PF12064
IPI:IPI00769023 Ensembl:ENSRNOT00000055139 RGD:1309544
ArrayExpress:E9PTL0 Uniprot:E9PTL0
Length = 1073
Score = 150 (57.9 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 29/74 (39%), Positives = 43/74 (58%)
Query: 333 DDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHKVTGVTDCLPDV 392
D +C VCHR G++LCCE CP V+H +C+ L P+ DW C C+ K+T V +C+
Sbjct: 63 DFYCWVCHREGQVLCCELCPRVYHAKCLR--LTSEPEGDWFCPECE--KIT-VAECIETQ 117
Query: 393 EKSGLLCRQEHLGF 406
K+ + E L +
Sbjct: 118 SKAMTMLTIEQLSY 131
Score = 37 (18.1 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 10/22 (45%), Positives = 11/22 (50%)
Query: 44 PITSRTSSPQGSETSRRSTAKK 65
P +S SPQ S TS KK
Sbjct: 26 PHSSNGHSPQDSSTSPIKKKKK 47
>UNIPROTKB|F5GY84 [details] [associations]
symbol:SP140 "Nuclear body protein SP140" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000770 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR004865 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF01342 Pfam:PF03172 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50864 PROSITE:PS51414 SMART:SM00249 SMART:SM00258
SMART:SM00297 GO:GO:0005737 GO:GO:0005730 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:3.10.390.10 InterPro:IPR010919
SUPFAM:SSF63763 Gene3D:1.20.920.10 SUPFAM:SSF47370 EMBL:AC009949
EMBL:AC009950 HGNC:HGNC:17133 ChiTaRS:SP140 IPI:IPI00908574
ProteinModelPortal:F5GY84 SMR:F5GY84 Ensembl:ENST00000486687
ArrayExpress:F5GY84 Bgee:F5GY84 Uniprot:F5GY84
Length = 768
Score = 140 (54.3 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 26/72 (36%), Positives = 36/72 (50%)
Query: 334 DHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHKVTGVTDCLPDVE 393
D C VC GEL CC+TC VFH +C PP+ + + W C C+ + G C + E
Sbjct: 615 DECEVCRDGGELFCCDTCSRVFHEDCHIPPV-EAERTPWNCIFCRMKESPGSQQCCQESE 673
Query: 394 K-SGLLCRQEHL 404
+C +E L
Sbjct: 674 VLERQMCPEEQL 685
>UNIPROTKB|E9PFJ6 [details] [associations]
symbol:SP140 "Nuclear body protein SP140" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000770 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR004865 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF01342 Pfam:PF03172 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50864 PROSITE:PS51414 SMART:SM00249 SMART:SM00258
SMART:SM00297 GO:GO:0005737 GO:GO:0005730 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:3.10.390.10 InterPro:IPR010919
SUPFAM:SSF63763 Gene3D:1.20.920.10 SUPFAM:SSF47370 EMBL:AC009949
EMBL:AC009950 HGNC:HGNC:17133 ChiTaRS:SP140 IPI:IPI00784584
ProteinModelPortal:E9PFJ6 SMR:E9PFJ6 PRIDE:E9PFJ6
Ensembl:ENST00000343805 UCSC:uc002vqm.3 ArrayExpress:E9PFJ6
Bgee:E9PFJ6 Uniprot:E9PFJ6
Length = 807
Score = 140 (54.3 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 26/72 (36%), Positives = 36/72 (50%)
Query: 334 DHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHKVTGVTDCLPDVE 393
D C VC GEL CC+TC VFH +C PP+ + + W C C+ + G C + E
Sbjct: 631 DECEVCRDGGELFCCDTCSRVFHEDCHIPPV-EAERTPWNCIFCRMKESPGSQQCCQESE 689
Query: 394 K-SGLLCRQEHL 404
+C +E L
Sbjct: 690 VLERQMCPEEQL 701
>UNIPROTKB|E7EUR5 [details] [associations]
symbol:SP140 "Nuclear body protein SP140" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000770 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR004865 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF01342 Pfam:PF03172 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50864 PROSITE:PS51414 SMART:SM00249 SMART:SM00258
SMART:SM00297 GO:GO:0005737 GO:GO:0005730 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:3.10.390.10 InterPro:IPR010919
SUPFAM:SSF63763 Gene3D:1.20.920.10 SUPFAM:SSF47370 EMBL:AC009949
EMBL:AC009950 HGNC:HGNC:17133 ChiTaRS:SP140 IPI:IPI01011082
ProteinModelPortal:E7EUR5 SMR:E7EUR5 Ensembl:ENST00000420434
UCSC:uc010fxl.3 ArrayExpress:E7EUR5 Bgee:E7EUR5 Uniprot:E7EUR5
Length = 840
Score = 140 (54.3 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 26/72 (36%), Positives = 36/72 (50%)
Query: 334 DHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHKVTGVTDCLPDVE 393
D C VC GEL CC+TC VFH +C PP+ + + W C C+ + G C + E
Sbjct: 664 DECEVCRDGGELFCCDTCSRVFHEDCHIPPV-EAERTPWNCIFCRMKESPGSQQCCQESE 722
Query: 394 K-SGLLCRQEHL 404
+C +E L
Sbjct: 723 VLERQMCPEEQL 734
>UNIPROTKB|Q13342 [details] [associations]
symbol:SP140 "Nuclear body protein SP140" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=TAS] [GO:0005634 "nucleus" evidence=TAS] [GO:0005635
"nuclear envelope" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006952 "defense response" evidence=TAS]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] InterPro:IPR000770 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR004865 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF01342 Pfam:PF03172 PROSITE:PS50014
PROSITE:PS50016 PROSITE:PS50864 PROSITE:PS51414 SMART:SM00249
SMART:SM00258 SMART:SM00297 GO:GO:0005737 GO:GO:0005635
GO:GO:0005654 GO:GO:0006952 GO:GO:0005730 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003700 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:3.10.390.10
InterPro:IPR010919 SUPFAM:SSF63763 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 OrthoDB:EOG44QT09 EMBL:AC009949
eggNOG:NOG300534 HOGENOM:HOG000089984 EMBL:U36499 EMBL:U36500
EMBL:U63420 EMBL:AC009950 EMBL:BC070160 IPI:IPI00012793
IPI:IPI00219535 IPI:IPI00219536 IPI:IPI00431685 PIR:G02099
RefSeq:NP_001005176.1 RefSeq:NP_009168.4 UniGene:Hs.632549
ProteinModelPortal:Q13342 SMR:Q13342 IntAct:Q13342 STRING:Q13342
PhosphoSite:Q13342 DMDM:218511671 PRIDE:Q13342
Ensembl:ENST00000373645 Ensembl:ENST00000392045 GeneID:11262
KEGG:hsa:11262 UCSC:uc002vql.3 UCSC:uc002vqn.3 CTD:11262
GeneCards:GC02P231090 HGNC:HGNC:17133 HPA:HPA006162 MIM:608602
neXtProt:NX_Q13342 PharmGKB:PA38205 HOVERGEN:HBG006294
InParanoid:Q13342 OMA:MCFSEEV ChiTaRS:SP140 GenomeRNAi:11262
NextBio:42859 ArrayExpress:Q13342 Bgee:Q13342 CleanEx:HS_SP140
Genevestigator:Q13342 GermOnline:ENSG00000079263 Uniprot:Q13342
Length = 867
Score = 140 (54.3 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 26/72 (36%), Positives = 36/72 (50%)
Query: 334 DHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHKVTGVTDCLPDVE 393
D C VC GEL CC+TC VFH +C PP+ + + W C C+ + G C + E
Sbjct: 691 DECEVCRDGGELFCCDTCSRVFHEDCHIPPV-EAERTPWNCIFCRMKESPGSQQCCQESE 749
Query: 394 K-SGLLCRQEHL 404
+C +E L
Sbjct: 750 VLERQMCPEEQL 761
>UNIPROTKB|F1MD96 [details] [associations]
symbol:F1MD96 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0042803 "protein homodimerization
activity" evidence=IEA] [GO:0016235 "aggresome" evidence=IEA]
[GO:0010369 "chromocenter" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000315 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR003649 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF00643 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50119
SMART:SM00249 SMART:SM00297 SMART:SM00336 SMART:SM00502
GO:GO:0005634 GO:GO:0045892 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0016235
Gene3D:1.20.920.10 SUPFAM:SSF47370 GO:GO:0010369
GeneTree:ENSGT00530000062982 OMA:HMENERA EMBL:DAAA02040745
EMBL:DAAA02040746 IPI:IPI01003121 Ensembl:ENSBTAT00000027831
Uniprot:F1MD96
Length = 1268
Score = 146 (56.5 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 24/47 (51%), Positives = 29/47 (61%)
Query: 333 DDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKA 379
+D C VC GELLCC+ CP V+HL C P L P DW C LC++
Sbjct: 1022 EDFCAVCLNGGELLCCDRCPKVYHLSCHLPALLSFPGGDWVCTLCRS 1068
Score = 42 (19.8 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 13/47 (27%), Positives = 23/47 (48%)
Query: 18 ERPKFQVHLLKKPQYLQNLEARGLNSPITSRTSSPQGSETSRRSTAK 64
++P Q+ K PQ+LQ +N + R +P S+ S+ T +
Sbjct: 543 QQPSLQLSQTKSPQHLQQTIVGQINYIV--RQPAPVQSQ-SQEDTVQ 586
Score = 37 (18.1 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 5/15 (33%), Positives = 10/15 (66%)
Query: 159 WLQTERQIQPLELPR 173
WL+T+ ++P P+
Sbjct: 408 WLETQPPVEPESTPQ 422
>RGD|1595847 [details] [associations]
symbol:Trim66 "tripartite motif-containing 66" species:10116
"Rattus norvegicus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0010369 "chromocenter" evidence=ISO] [GO:0016235
"aggresome" evidence=ISO] [GO:0042803 "protein homodimerization
activity" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR000315 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR003649 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF00643 PROSITE:PS50014
PROSITE:PS50016 PROSITE:PS50119 SMART:SM00249 SMART:SM00297
SMART:SM00336 SMART:SM00502 RGD:1595847 GO:GO:0005634 GO:GO:0045892
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0016235 Gene3D:1.20.920.10 SUPFAM:SSF47370
GO:GO:0010369 GeneTree:ENSGT00530000062982 IPI:IPI00366002
PRIDE:F1M6Z0 Ensembl:ENSRNOT00000019368 UCSC:RGD:1595847
NextBio:676966 ArrayExpress:F1M6Z0 Uniprot:F1M6Z0
Length = 1307
Score = 143 (55.4 bits), Expect = 6.8e-06, Sum P(3) = 6.8e-06
Identities = 23/47 (48%), Positives = 29/47 (61%)
Query: 333 DDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKA 379
+D C VC GELLCC+ CP V+HL C P L P +W C LC++
Sbjct: 1061 EDFCAVCINGGELLCCDRCPKVYHLSCHVPALLSFPGGEWVCTLCRS 1107
Score = 43 (20.2 bits), Expect = 6.8e-06, Sum P(3) = 6.8e-06
Identities = 20/50 (40%), Positives = 25/50 (50%)
Query: 167 QPLELPRSSDD-LLIPREYVMQTLSIYEVLRHFKSLIRLSPFRFEDFCAV 215
+PLE+ +SD+ LIPR TL K I +P EDFCAV
Sbjct: 1030 RPLEVDGTSDEHRLIPR-----TLGA-------KKCIP-APIENEDFCAV 1066
Score = 42 (19.8 bits), Expect = 6.8e-06, Sum P(3) = 6.8e-06
Identities = 14/57 (24%), Positives = 25/57 (43%)
Query: 18 ERPKFQVHLLKKPQYLQNLEARGLN------SPITSRTSSPQGSETSRRSTAKKGTK 68
++P Q+ K PQ+LQ +N +P+ S+ S + + A +G K
Sbjct: 587 QQPSLQLSQTKSPQHLQQTIVGQINYIVRQPAPVQSQ-SQEDTLQVTEEPPASEGPK 642
>UNIPROTKB|F1RGC2 [details] [associations]
symbol:TRIM66 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0042803 "protein homodimerization
activity" evidence=IEA] [GO:0016235 "aggresome" evidence=IEA]
[GO:0010369 "chromocenter" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000315 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR003649 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF00643 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50119
SMART:SM00249 SMART:SM00297 SMART:SM00502 GO:GO:0005634
GO:GO:0045892 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0016235 Gene3D:1.20.920.10
SUPFAM:SSF47370 GO:GO:0010369 GeneTree:ENSGT00530000062982
OMA:HMENERA EMBL:FP102759 Ensembl:ENSSSCT00000015917 Uniprot:F1RGC2
Length = 1238
Score = 146 (56.5 bits), Expect = 6.8e-06, Sum P(2) = 6.8e-06
Identities = 24/47 (51%), Positives = 29/47 (61%)
Query: 333 DDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKA 379
+D C VC GELLCC+ CP V+HL C P L P DW C LC++
Sbjct: 992 EDFCAVCLNGGELLCCDRCPKVYHLSCHLPALLSFPGGDWVCTLCRS 1038
Score = 40 (19.1 bits), Expect = 6.8e-06, Sum P(2) = 6.8e-06
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 18 ERPKFQVHLLKKPQYLQ 34
++P Q+ K PQ+LQ
Sbjct: 530 QQPSLQLSQTKSPQHLQ 546
>MGI|MGI:2152406 [details] [associations]
symbol:Trim66 "tripartite motif-containing 66" species:10090
"Mus musculus" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0010369 "chromocenter" evidence=IDA] [GO:0042803 "protein
homodimerization activity" evidence=IPI] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF00643
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50119 SMART:SM00249
SMART:SM00297 SMART:SM00502 MGI:MGI:2152406 GO:GO:0005634
GO:GO:0045892 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 eggNOG:COG5076 GO:GO:0010369
EMBL:AJ307670 GeneTree:ENSGT00530000062982 CTD:9866
HOGENOM:HOG000074104 HOVERGEN:HBG057849 KO:K12032 EMBL:AY572455
EMBL:AC124457 IPI:IPI00776191 IPI:IPI00853877 RefSeq:NP_862901.3
UniGene:Mm.183528 ProteinModelPortal:Q924W6 SMR:Q924W6
STRING:Q924W6 PhosphoSite:Q924W6 PRIDE:Q924W6
Ensembl:ENSMUST00000033339 GeneID:330627 KEGG:mmu:330627
InParanoid:Q924W6 NextBio:399482 Bgee:Q924W6 CleanEx:MM_TRIM66
Genevestigator:Q924W6 Uniprot:Q924W6
Length = 1242
Score = 143 (55.4 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
Identities = 23/47 (48%), Positives = 29/47 (61%)
Query: 333 DDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKA 379
+D C VC GELLCC+ CP V+HL C P L P +W C LC++
Sbjct: 996 EDFCAVCINGGELLCCDRCPKVYHLSCHVPALLSFPGGEWVCTLCRS 1042
Score = 43 (20.2 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
Identities = 14/57 (24%), Positives = 26/57 (45%)
Query: 18 ERPKFQVHLLKKPQYLQNLEARGLN------SPITSRTSSPQGSETSRRSTAKKGTK 68
++P Q+ K PQ+LQ +N +P+ S+ S + + + A +G K
Sbjct: 522 QQPSLQLSQTKSPQHLQQTIVGQINYIVRQPAPVQSQ-SQEETLQVTEEPPAPEGPK 577
>UNIPROTKB|H0Y9U6 [details] [associations]
symbol:WHSC1 "Histone-lysine N-methyltransferase NSD2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628
PROSITE:PS50016 SMART:SM00249 Pfam:PF00855 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR000313
PROSITE:PS50812 SMART:SM00293 EMBL:AL132868 EMBL:AC105448
HGNC:HGNC:12766 ChiTaRS:WHSC1 Ensembl:ENST00000514329
Uniprot:H0Y9U6
Length = 284
Score = 128 (50.1 bits), Expect = 7.8e-06, Sum P(2) = 7.8e-06
Identities = 22/46 (47%), Positives = 30/46 (65%)
Query: 336 CRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHK 381
C VC + G LLCCE+CPA FH +C++ ++P W CN C+A K
Sbjct: 158 CFVCSKGGSLLCCESCPAAFHPDCLNI---EMPDGSWFCNDCRAGK 200
Score = 40 (19.1 bits), Expect = 7.8e-06, Sum P(2) = 7.8e-06
Identities = 12/46 (26%), Positives = 21/46 (45%)
Query: 29 KPQYLQNLEARGLNSPIT-SRTSSPQGSETSRRSTAKKGTKRKSNP 73
KP +N + +S + S++SSP S T + G + +P
Sbjct: 8 KPLKKRNRASTAASSALGFSKSSSPSASLTENEVSDSPGDEPSESP 53
>MGI|MGI:2141847 [details] [associations]
symbol:Phrf1 "PHD and ring finger domains 1" species:10090
"Mus musculus" [GO:0005634 "nucleus" evidence=ISO] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0006397 "mRNA processing" evidence=ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=ISO] [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0070063 "RNA polymerase binding" evidence=ISO]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR002219
InterPro:IPR019787 Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016
PROSITE:PS50089 SMART:SM00109 SMART:SM00184 SMART:SM00249
MGI:MGI:2141847 Prosite:PS00518 GO:GO:0005634 GO:GO:0035556
GO:GO:0046872 GO:GO:0008270 GO:GO:0006397 GO:GO:0006366
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS01359 InterPro:IPR017907 CTD:57661
eggNOG:NOG300312 HOVERGEN:HBG108250 OMA:YMKKLHM ChiTaRS:PHRF1
GO:GO:0070063 EMBL:AC108908 EMBL:AC163434 EMBL:BC094566
EMBL:BC138446 EMBL:BC145719 EMBL:AK129387 IPI:IPI00881116
IPI:IPI00881246 RefSeq:NP_001074587.1 UniGene:Mm.248656
ProteinModelPortal:A6H619 SMR:A6H619 STRING:A6H619 PRIDE:A6H619
Ensembl:ENSMUST00000106027 Ensembl:ENSMUST00000122143 GeneID:101471
KEGG:mmu:101471 UCSC:uc009kkb.1 UCSC:uc009kkc.1
GeneTree:ENSGT00530000063661 HOGENOM:HOG000082501 InParanoid:Q505G1
NextBio:354944 Bgee:A6H619 Genevestigator:A6H619 Uniprot:A6H619
Length = 1682
Score = 140 (54.3 bits), Expect = 9.3e-06, P = 9.3e-06
Identities = 38/113 (33%), Positives = 52/113 (46%)
Query: 291 NTCEYPFTNIEKRLRVLQFLTDQILITSPVREDLIHEGGFQYDDHCRVC---HRVGELLC 347
N+C T + K + + +IL PV E + C VC R LL
Sbjct: 144 NSCPVDRT-VFKCICIRAQFNGKILKKIPVENTKACEAEEEDPTFCEVCGRSDREDRLLL 202
Query: 348 CETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHKVTGVTDCLP--DVEKSGLL 398
C+ C A +H+EC+DPPL++VP ++W C C V D P D E S LL
Sbjct: 203 CDGCDAGYHMECLDPPLQEVPVDEWFCPECTVPGVDPTHDAAPVSDEEVSLLL 255
>UNIPROTKB|C9J9G2 [details] [associations]
symbol:PHF12 "PHD finger protein 12" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 EMBL:AC024267 HGNC:HGNC:20816
HOGENOM:HOG000220810 ChiTaRS:PHF12 IPI:IPI00952567
ProteinModelPortal:C9J9G2 STRING:C9J9G2 Ensembl:ENST00000378879
UCSC:uc002hdh.1 ArrayExpress:C9J9G2 Uniprot:C9J9G2
Length = 705
Score = 142 (55.0 bits), Expect = 9.5e-06, Sum P(2) = 9.5e-06
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 334 DHCRVCHRVGELLCCETCPAVFHLECVDPPLRD--VPQEDWQCNLCKAHK 381
D C C G+LLCC+ CPA FHL+C +PPL + +P +W C+ C +
Sbjct: 57 DSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCTVRR 106
Score = 37 (18.1 bits), Expect = 9.5e-06, Sum P(2) = 9.5e-06
Identities = 10/36 (27%), Positives = 16/36 (44%)
Query: 40 GLNSPITSRTSSPQGSETSRRSTAKKGTKRKSNPPT 75
GL I + + P+ E +RS + R+S T
Sbjct: 19 GLMEQIQALLAPPKTDEAEKRSRKPEKEPRRSGRAT 54
>UNIPROTKB|D4AC30 [details] [associations]
symbol:D4AC30 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 IPI:IPI00781625
Ensembl:ENSRNOT00000035130 ArrayExpress:D4AC30 Uniprot:D4AC30
Length = 786
Score = 142 (55.0 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 334 DHCRVCHRVGELLCCETCPAVFHLECVDPPLRD--VPQEDWQCNLCKAHK 381
D C C G+LLCC+ CPA FHL+C +PPL + +P +W C+ C +
Sbjct: 57 DSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCTVRR 106
Score = 38 (18.4 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 10/36 (27%), Positives = 16/36 (44%)
Query: 40 GLNSPITSRTSSPQGSETSRRSTAKKGTKRKSNPPT 75
GL I + + P+ E +RS + R+S T
Sbjct: 19 GLMEQIQALLAPPKTDEAEKRSRKPEKESRRSGRAT 54
>MGI|MGI:1276545 [details] [associations]
symbol:Nsd1 "nuclear receptor-binding SET-domain protein 1"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0001702 "gastrulation with mouth forming second" evidence=IMP]
[GO:0003682 "chromatin binding" evidence=IDA] [GO:0003712
"transcription cofactor activity" evidence=ISO;IDA] [GO:0003714
"transcription corepressor activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IC;IDA] [GO:0005694 "chromosome" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0008168 "methyltransferase activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=ISO] [GO:0010452 "histone H3-K36
methylation" evidence=ISO] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016571 "histone methylation" evidence=IDA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016922
"ligand-dependent nuclear receptor binding" evidence=IPI]
[GO:0018024 "histone-lysine N-methyltransferase activity"
evidence=IEA] [GO:0030331 "estrogen receptor binding" evidence=IPI]
[GO:0032259 "methylation" evidence=IEA] [GO:0035097 "histone
methyltransferase complex" evidence=IC] [GO:0042054 "histone
methyltransferase activity" evidence=IDA] [GO:0042799 "histone
methyltransferase activity (H4-K20 specific)" evidence=IDA]
[GO:0042974 "retinoic acid receptor binding" evidence=IPI]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0046965 "retinoid X receptor binding" evidence=IPI] [GO:0046966
"thyroid hormone receptor binding" evidence=IPI] [GO:0046975
"histone methyltransferase activity (H3-K36 specific)"
evidence=ISO;IDA] [GO:0050681 "androgen receptor binding"
evidence=ISO] InterPro:IPR001841 Pfam:PF00856 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR006560 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50280 PROSITE:PS51215
SMART:SM00184 SMART:SM00249 SMART:SM00317 SMART:SM00570
EMBL:AF064553 MGI:MGI:1276545 Pfam:PF00855 GO:GO:0003714
GO:GO:0005694 GO:GO:0045893 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 GO:GO:0003682 GO:GO:0000122 UniGene:Mm.12964
GO:GO:0001702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0050681 eggNOG:COG2940 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GO:GO:0042799 InterPro:IPR000313
PROSITE:PS50812 SMART:SM00293 GO:GO:0046975 GO:GO:0035097
HOGENOM:HOG000113857 HOVERGEN:HBG007518 OrthoDB:EOG49GKFN
ChiTaRS:NSD1 EMBL:AK082820 EMBL:AK004485 IPI:IPI00131111 PIR:T14342
UniGene:Mm.168965 ProteinModelPortal:O88491 SMR:O88491
STRING:O88491 PhosphoSite:O88491 PaxDb:O88491 PRIDE:O88491
UCSC:uc007qqd.1 CleanEx:MM_NSD1 Genevestigator:O88491
GermOnline:ENSMUSG00000021488 Uniprot:O88491
Length = 2588
Score = 141 (54.7 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 24/46 (52%), Positives = 31/46 (67%)
Query: 336 CRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHK 381
C VC G LLCC++CPA FH EC++ D+P+ +W CN CKA K
Sbjct: 1608 CFVCSEGGSLLCCDSCPAAFHRECLNI---DIPEGNWYCNDCKAGK 1650
>UNIPROTKB|E1BM66 [details] [associations]
symbol:NSD1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050681 "androgen receptor binding" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003712 "transcription cofactor activity" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0001702
"gastrulation with mouth forming second" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] Pfam:PF00856
InterPro:IPR001214 InterPro:IPR001965 InterPro:IPR006560
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50280
PROSITE:PS51215 SMART:SM00249 SMART:SM00317 SMART:SM00570
Pfam:PF00855 GO:GO:0005634 GO:GO:0045893 GO:GO:0046872
GO:GO:0008270 GO:GO:0003682 GO:GO:0001702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0003712
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968
InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
GeneTree:ENSGT00700000104009 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 OMA:NIDKMRH EMBL:DAAA02020051 EMBL:DAAA02020048
EMBL:DAAA02020049 EMBL:DAAA02020050 IPI:IPI00716946
Ensembl:ENSBTAT00000034204 Uniprot:E1BM66
Length = 2698
Score = 141 (54.7 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 24/46 (52%), Positives = 31/46 (67%)
Query: 336 CRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHK 381
C VC G LLCC++CPA FH EC++ D+P+ +W CN CKA K
Sbjct: 1713 CFVCSEGGSLLCCDSCPAAFHRECLNI---DIPEGNWYCNDCKAGK 1755
>UNIPROTKB|Q9H930 [details] [associations]
symbol:SP140L "Nuclear body protein SP140-like protein"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000770 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR004865 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF01342 Pfam:PF03172 PROSITE:PS50014
PROSITE:PS50016 PROSITE:PS50864 PROSITE:PS51414 SMART:SM00249
SMART:SM00258 SMART:SM00297 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:3.10.390.10 InterPro:IPR010919
SUPFAM:SSF63763 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
HSSP:O43918 OrthoDB:EOG44QT09 EMBL:AC009949 EMBL:BC004921
EMBL:BC105007 EMBL:BQ690359 EMBL:AK023116 IPI:IPI00027693
IPI:IPI00719187 IPI:IPI00884908 IPI:IPI01009049 RefSeq:NP_612411.4
UniGene:Hs.589661 ProteinModelPortal:Q9H930 SMR:Q9H930
STRING:Q9H930 PhosphoSite:Q9H930 DMDM:182705269 PRIDE:Q9H930
Ensembl:ENST00000243810 Ensembl:ENST00000415673
Ensembl:ENST00000444636 Ensembl:ENST00000458341 GeneID:93349
KEGG:hsa:93349 UCSC:uc010fxm.1 UCSC:uc010fxn.2 UCSC:uc010fxo.1
CTD:93349 GeneCards:GC02P231191 HGNC:HGNC:25105 neXtProt:NX_Q9H930
PharmGKB:PA164726206 eggNOG:NOG300534 HOGENOM:HOG000089984
OMA:QETNGNS GenomeRNAi:93349 NextBio:78053 Bgee:Q9H930
CleanEx:HS_SP140L Genevestigator:Q9H930 Uniprot:Q9H930
Length = 580
Score = 138 (53.6 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 26/72 (36%), Positives = 35/72 (48%)
Query: 334 DHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHKVTGVTDCLPDVE 393
D C VC GEL CC+TC VFH +C PP+ + W C C+ + G C + E
Sbjct: 404 DECEVCRDGGELFCCDTCSRVFHEDCHIPPVES-EKTPWNCIFCRMKESPGSQQCCQESE 462
Query: 394 K-SGLLCRQEHL 404
+C +E L
Sbjct: 463 VLERQMCPEEQL 474
Score = 38 (18.4 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 300 IEKRLRVLQFLTDQILITSPVRED 323
I+K L+ L D+ LIT+ + ED
Sbjct: 68 IKKTFPFLEGLRDRELITNKMFED 91
>POMBASE|SPAC16C9.05 [details] [associations]
symbol:cph1 "Clr6 histone deacetylase associated PHD
protein-1 Cph1" species:4896 "Schizosaccharomyces pombe"
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IPI]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016575 "histone deacetylation" evidence=ISO]
[GO:0019787 "small conjugating protein ligase activity"
evidence=ISM] [GO:0032221 "Rpd3S complex" evidence=IDA] [GO:0071276
"cellular response to cadmium ion" evidence=IMP] [GO:0071585
"detoxification of cadmium ion" evidence=IMP] InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00249
PomBase:SPAC16C9.05 GO:GO:0005829 EMBL:CU329670 GO:GO:0046872
GO:GO:0071276 GO:GO:0071585 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0006368
InterPro:IPR019786 PROSITE:PS01359 eggNOG:NOG317492 GO:GO:0019787
GO:GO:0016575 GO:GO:0032221 PIR:T37778 RefSeq:NP_593079.1
ProteinModelPortal:Q09819 STRING:Q09819 EnsemblFungi:SPAC16C9.05.1
GeneID:2542318 KEGG:spo:SPAC16C9.05 OrthoDB:EOG4N6053
NextBio:20803379 Uniprot:Q09819
Length = 404
Score = 131 (51.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 22/51 (43%), Positives = 30/51 (58%)
Query: 334 DHCRVCHRVGELLCCETCPAVFHLECVDPPL--RDVPQEDWQCNLC--KAH 380
D+C C G +CCE CP FHL C++PPL ++P+ W C C K+H
Sbjct: 118 DYCSACGGRGLFICCEGCPCSFHLSCLEPPLTPENIPEGSWFCVTCSIKSH 168
>UNIPROTKB|F1SMZ0 [details] [associations]
symbol:SP140 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000770 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR004865 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF01342 Pfam:PF03172 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50864 PROSITE:PS51414 SMART:SM00249 SMART:SM00258
SMART:SM00297 GO:GO:0005737 GO:GO:0005730 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:3.10.390.10 InterPro:IPR010919
SUPFAM:SSF63763 Gene3D:1.20.920.10 SUPFAM:SSF47370 OMA:QETNGNS
GeneTree:ENSGT00510000046835 EMBL:CU683888
Ensembl:ENSSSCT00000017707 Uniprot:F1SMZ0
Length = 839
Score = 135 (52.6 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 25/68 (36%), Positives = 36/68 (52%)
Query: 334 DHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHKVTGVTDCLPDVE 393
D C VC R G+L CC+TC FH +C PP+ + + W C C +++ CL + E
Sbjct: 660 DVCEVCRREGKLFCCDTCSRSFHEDCHIPPV-ETERTPWSCTFCSMKEISESQPCLRESE 718
Query: 394 KSGLLCRQ 401
+L RQ
Sbjct: 719 ---VLARQ 723
>UNIPROTKB|F1RNA4 [details] [associations]
symbol:PHF12 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0035091 "phosphatidylinositol binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0016580 "Sin3 complex" evidence=IEA] [GO:0001222 "transcription
corepressor binding" evidence=IEA] [GO:0001106 "RNA polymerase II
transcription corepressor activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR000253 InterPro:IPR001965
InterPro:IPR008984 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50006
PROSITE:PS50016 SMART:SM00249 GO:GO:0017053 GO:GO:0046872
GO:GO:0008270 Gene3D:2.60.200.20 SUPFAM:SSF49879 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0035091 GO:GO:0001106
GO:GO:0016580 CTD:57649 OMA:MSSQAQG GeneTree:ENSGT00440000033777
EMBL:FP236132 RefSeq:XP_003131823.2 UniGene:Ssc.50204
Ensembl:ENSSSCT00000019351 GeneID:100515341 KEGG:ssc:100515341
Uniprot:F1RNA4
Length = 1004
Score = 142 (55.0 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 334 DHCRVCHRVGELLCCETCPAVFHLECVDPPLRD--VPQEDWQCNLCKAHK 381
D C C G+LLCC+ CPA FHL+C +PPL + +P +W C+ C +
Sbjct: 57 DSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCTVRR 106
Score = 39 (18.8 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 10/36 (27%), Positives = 16/36 (44%)
Query: 40 GLNSPITSRTSSPQGSETSRRSTAKKGTKRKSNPPT 75
GL I + + P+ E +RS + R+S T
Sbjct: 19 GLMEQIQALLAPPKADEAEKRSRKPEKEPRRSGRAT 54
>UNIPROTKB|G3MZ32 [details] [associations]
symbol:G3MZ32 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 PROSITE:PS50014 PROSITE:PS50016
SMART:SM00249 SMART:SM00297 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.20.920.10 SUPFAM:SSF47370 GeneTree:ENSGT00510000046835
EMBL:DAAA02006184 Ensembl:ENSBTAT00000063110 Uniprot:G3MZ32
Length = 218
Score = 120 (47.3 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 22/69 (31%), Positives = 34/69 (49%)
Query: 334 DHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHKVTGVTDCLPDVE 393
D C C G+L CC+TC FH +C PP+ + ++ W C C+ + +G L + E
Sbjct: 38 DVCETCRDGGKLFCCDTCSRSFHEDCHIPPV-ETEKDPWSCTFCRMKESSGNQQGLGESE 96
Query: 394 KSGLLCRQE 402
L + E
Sbjct: 97 VLARLMQSE 105
Score = 40 (19.1 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 10/17 (58%), Positives = 13/17 (76%)
Query: 2 YGRIKRRGRPPKTP-NT 17
YGR K++ R PK+P NT
Sbjct: 13 YGRRKKK-RGPKSPDNT 28
>UNIPROTKB|Q2TAK2 [details] [associations]
symbol:PHF12 "PHF12 protein" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00249
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 EMBL:AC024267 UniGene:Hs.444173 HGNC:HGNC:20816
HOVERGEN:HBG057884 ChiTaRS:PHF12 IPI:IPI00952567 EMBL:BC110882
ProteinModelPortal:Q2TAK2 SMR:Q2TAK2 STRING:Q2TAK2
Ensembl:ENST00000577226 UCSC:uc002hdi.1 Bgee:Q2TAK2 Uniprot:Q2TAK2
Length = 849
Score = 142 (55.0 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 334 DHCRVCHRVGELLCCETCPAVFHLECVDPPLRD--VPQEDWQCNLCKAHK 381
D C C G+LLCC+ CPA FHL+C +PPL + +P +W C+ C +
Sbjct: 57 DSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCTVRR 106
Score = 37 (18.1 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 10/36 (27%), Positives = 16/36 (44%)
Query: 40 GLNSPITSRTSSPQGSETSRRSTAKKGTKRKSNPPT 75
GL I + + P+ E +RS + R+S T
Sbjct: 19 GLMEQIQALLAPPKTDEAEKRSRKPEKEPRRSGRAT 54
>ZFIN|ZDB-GENE-080519-2 [details] [associations]
symbol:nsd1b "nuclear receptor binding SET domain
protein 1b" species:7955 "Danio rerio" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0032259 "methylation" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] Pfam:PF00856 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR006560 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50280 PROSITE:PS51215
SMART:SM00249 SMART:SM00317 SMART:SM00570 Pfam:PF00855
ZFIN:ZDB-GENE-080519-2 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0018024
GO:GO:0034968 InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
GeneTree:ENSGT00700000104009 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 EMBL:BX842703 IPI:IPI00488658
Ensembl:ENSDART00000131188 Bgee:F1Q9U9 Uniprot:F1Q9U9
Length = 1873
Score = 138 (53.6 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 24/46 (52%), Positives = 30/46 (65%)
Query: 336 CRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHK 381
C VC G LLCCE+CPA FH EC++ D+P+ W CN C+A K
Sbjct: 1263 CFVCSEGGSLLCCESCPAAFHRECLNI---DMPEGSWYCNDCRAGK 1305
>MGI|MGI:1924057 [details] [associations]
symbol:Phf12 "PHD finger protein 12" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0001106 "RNA
polymerase II transcription corepressor activity" evidence=ISO]
[GO:0001222 "transcription corepressor binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016580 "Sin3 complex" evidence=ISO]
[GO:0017053 "transcriptional repressor complex" evidence=ISO]
[GO:0035091 "phosphatidylinositol binding" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR000253 InterPro:IPR001965 InterPro:IPR008984
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50006 PROSITE:PS50016
SMART:SM00249 MGI:MGI:1924057 GO:GO:0017053 GO:GO:0046872
GO:GO:0008270 Gene3D:2.60.200.20 SUPFAM:SSF49879 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0035091 GO:GO:0001106
GO:GO:0016580 EMBL:AL669840 CTD:57649 eggNOG:NOG145066
HOGENOM:HOG000220810 HOVERGEN:HBG057884 OMA:MSSQAQG
OrthoDB:EOG4VHK63 ChiTaRS:PHF12 EMBL:AL845484 EMBL:BC043080
EMBL:AK129383 IPI:IPI00330525 IPI:IPI00515364 RefSeq:NP_777277.2
UniGene:Mm.274329 ProteinModelPortal:Q5SPL2 SMR:Q5SPL2
DIP:DIP-59633N PhosphoSite:Q5SPL2 PRIDE:Q5SPL2
Ensembl:ENSMUST00000049167 Ensembl:ENSMUST00000108360 GeneID:268448
KEGG:mmu:268448 GeneTree:ENSGT00440000033777 InParanoid:Q5SPL2
NextBio:392291 Bgee:Q5SPL2 CleanEx:MM_PHF12 Genevestigator:Q5SPL2
GermOnline:ENSMUSG00000037791 Uniprot:Q5SPL2
Length = 1003
Score = 142 (55.0 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 334 DHCRVCHRVGELLCCETCPAVFHLECVDPPLRD--VPQEDWQCNLCKAHK 381
D C C G+LLCC+ CPA FHL+C +PPL + +P +W C+ C +
Sbjct: 57 DSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCTVRR 106
Score = 38 (18.4 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 10/36 (27%), Positives = 16/36 (44%)
Query: 40 GLNSPITSRTSSPQGSETSRRSTAKKGTKRKSNPPT 75
GL I + + P+ E +RS + R+S T
Sbjct: 19 GLMEQIQALLAPPKTDEAEKRSRKPEKESRRSGRAT 54
>UNIPROTKB|F1LM99 [details] [associations]
symbol:F1LM99 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000253 InterPro:IPR001965 InterPro:IPR008984
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50006 PROSITE:PS50016
SMART:SM00249 GO:GO:0017053 GO:GO:0046872 GO:GO:0008270
Gene3D:2.60.200.20 SUPFAM:SSF49879 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0035091 GO:GO:0001106
GO:GO:0016580 OMA:MSSQAQG GeneTree:ENSGT00440000033777
IPI:IPI00369959 Ensembl:ENSRNOT00000056234 ArrayExpress:F1LM99
Uniprot:F1LM99
Length = 1003
Score = 142 (55.0 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 334 DHCRVCHRVGELLCCETCPAVFHLECVDPPLRD--VPQEDWQCNLCKAHK 381
D C C G+LLCC+ CPA FHL+C +PPL + +P +W C+ C +
Sbjct: 57 DSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCTVRR 106
Score = 38 (18.4 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 10/36 (27%), Positives = 16/36 (44%)
Query: 40 GLNSPITSRTSSPQGSETSRRSTAKKGTKRKSNPPT 75
GL I + + P+ E +RS + R+S T
Sbjct: 19 GLMEQIQALLAPPKTDEAEKRSRKPEKESRRSGRAT 54
>UNIPROTKB|E2QYC0 [details] [associations]
symbol:PHF12 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 OMA:MSSQAQG
GeneTree:ENSGT00440000033777 EMBL:AAEX03006672
Ensembl:ENSCAFT00000029911 Uniprot:E2QYC0
Length = 910
Score = 142 (55.0 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 334 DHCRVCHRVGELLCCETCPAVFHLECVDPPLRD--VPQEDWQCNLCKAHK 381
D C C G+LLCC+ CPA FHL+C +PPL + +P +W C+ C +
Sbjct: 57 DSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCTVRR 106
Score = 37 (18.1 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 10/36 (27%), Positives = 16/36 (44%)
Query: 40 GLNSPITSRTSSPQGSETSRRSTAKKGTKRKSNPPT 75
GL I + + P+ E +RS + R+S T
Sbjct: 19 GLMEQIQALLAPPKTDEAEKRSRKPEKEPRRSGRAT 54
>UNIPROTKB|E1B7A1 [details] [associations]
symbol:PHF12 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0035091 "phosphatidylinositol binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0016580 "Sin3 complex" evidence=IEA] [GO:0001222 "transcription
corepressor binding" evidence=IEA] [GO:0001106 "RNA polymerase II
transcription corepressor activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR000253 InterPro:IPR001965
InterPro:IPR008984 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50006
PROSITE:PS50016 SMART:SM00249 GO:GO:0017053 GO:GO:0046872
GO:GO:0008270 Gene3D:2.60.200.20 SUPFAM:SSF49879 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0035091 GO:GO:0001106
GO:GO:0016580 CTD:57649 OMA:MSSQAQG GeneTree:ENSGT00440000033777
EMBL:DAAA02048610 IPI:IPI00688031 RefSeq:NP_001179060.1
UniGene:Bt.52047 PRIDE:E1B7A1 Ensembl:ENSBTAT00000021255
GeneID:507057 KEGG:bta:507057 NextBio:20867881 Uniprot:E1B7A1
Length = 1004
Score = 142 (55.0 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 334 DHCRVCHRVGELLCCETCPAVFHLECVDPPLRD--VPQEDWQCNLCKAHK 381
D C C G+LLCC+ CPA FHL+C +PPL + +P +W C+ C +
Sbjct: 57 DSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCTVRR 106
Score = 37 (18.1 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 10/36 (27%), Positives = 16/36 (44%)
Query: 40 GLNSPITSRTSSPQGSETSRRSTAKKGTKRKSNPPT 75
GL I + + P+ E +RS + R+S T
Sbjct: 19 GLMEQIQALLAPPKTDEAEKRSRKPEKEPRRSGRAT 54
>UNIPROTKB|Q96QT6 [details] [associations]
symbol:PHF12 "PHD finger protein 12" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0001222
"transcription corepressor binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0017053 "transcriptional repressor complex" evidence=IDA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0035091 "phosphatidylinositol binding"
evidence=IDA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0001106 "RNA
polymerase II transcription corepressor activity" evidence=IDA]
[GO:0016580 "Sin3 complex" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR000253 InterPro:IPR001965
InterPro:IPR008984 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50006
PROSITE:PS50016 SMART:SM00249 GO:GO:0017053 GO:GO:0046872
GO:GO:0008270 Gene3D:2.60.200.20 SUPFAM:SSF49879 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0035091 EMBL:CH471159
GO:GO:0001106 GO:GO:0016580 PDB:2LKM PDBsum:2LKM EMBL:AY030283
EMBL:AK024290 EMBL:AK160370 EMBL:BC001657 EMBL:BC121044
EMBL:AB040956 IPI:IPI00290033 IPI:IPI00292750 IPI:IPI00441976
IPI:IPI00607816 RefSeq:NP_001028733.1 RefSeq:NP_065940.1
UniGene:Hs.444173 PDB:2L9S PDBsum:2L9S ProteinModelPortal:Q96QT6
SMR:Q96QT6 DIP:DIP-59632N IntAct:Q96QT6 STRING:Q96QT6
PhosphoSite:Q96QT6 DMDM:71153050 PaxDb:Q96QT6 PRIDE:Q96QT6
Ensembl:ENST00000268756 Ensembl:ENST00000332830 GeneID:57649
KEGG:hsa:57649 UCSC:uc002hdg.1 UCSC:uc002hdj.1 CTD:57649
GeneCards:GC17M027232 H-InvDB:HIX0202392 HGNC:HGNC:20816
HPA:HPA021410 neXtProt:NX_Q96QT6 PharmGKB:PA134954478
eggNOG:NOG145066 HOGENOM:HOG000220810 HOVERGEN:HBG057884
InParanoid:Q96QT6 OMA:MSSQAQG OrthoDB:EOG4VHK63 ChiTaRS:PHF12
EvolutionaryTrace:Q96QT6 GenomeRNAi:57649 NextBio:64390
ArrayExpress:Q96QT6 Bgee:Q96QT6 CleanEx:HS_PHF12
Genevestigator:Q96QT6 GermOnline:ENSG00000109118 Uniprot:Q96QT6
Length = 1004
Score = 142 (55.0 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 334 DHCRVCHRVGELLCCETCPAVFHLECVDPPLRD--VPQEDWQCNLCKAHK 381
D C C G+LLCC+ CPA FHL+C +PPL + +P +W C+ C +
Sbjct: 57 DSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCTVRR 106
Score = 37 (18.1 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 10/36 (27%), Positives = 16/36 (44%)
Query: 40 GLNSPITSRTSSPQGSETSRRSTAKKGTKRKSNPPT 75
GL I + + P+ E +RS + R+S T
Sbjct: 19 GLMEQIQALLAPPKTDEAEKRSRKPEKEPRRSGRAT 54
>UNIPROTKB|J9NVX7 [details] [associations]
symbol:NSD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF00856 InterPro:IPR001214 InterPro:IPR001965
InterPro:IPR006560 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184 SMART:SM00249
SMART:SM00317 SMART:SM00570 Pfam:PF00855 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GeneTree:ENSGT00700000104009
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 EMBL:AAEX03002967
EMBL:AAEX03002968 EMBL:AAEX03002969 EMBL:AAEX03002970
Ensembl:ENSCAFT00000045272 Uniprot:J9NVX7
Length = 2429
Score = 141 (54.7 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 24/46 (52%), Positives = 31/46 (67%)
Query: 336 CRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHK 381
C VC G LLCC++CPA FH EC++ D+P+ +W CN CKA K
Sbjct: 1442 CFVCSEGGSLLCCDSCPAAFHRECLNI---DIPEGNWYCNDCKAGK 1484
Score = 46 (21.3 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 19/79 (24%), Positives = 33/79 (41%)
Query: 235 TIFREEDTQQTHFGPLDQK-DSANSVLYFIDAMTWPEALRSYIESDKTFDEEVLNILNTC 293
+I D + P+D +S NSVL DA E + S +++K +
Sbjct: 368 SICTTSDDGSSDLDPIDNSSESDNSVLEITDAFDRTENMLSVQKNEK---------VKYT 418
Query: 294 EYPFTNIEKRLRVLQFLTD 312
YP TN + + + +T+
Sbjct: 419 RYPATNTKVKAKQKSLITN 437
>UNIPROTKB|F1N9E9 [details] [associations]
symbol:Gga.18314 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] InterPro:IPR001841
Pfam:PF00856 InterPro:IPR001214 InterPro:IPR001965
InterPro:IPR006560 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184 SMART:SM00249
SMART:SM00317 SMART:SM00570 Pfam:PF00855 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968
GeneTree:ENSGT00700000104009 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 EMBL:AADN02028734 EMBL:AADN02028735 EMBL:AADN02028736
EMBL:AADN02028737 EMBL:AADN02028738 EMBL:AADN02028739
EMBL:AADN02028740 EMBL:AADN02028741 EMBL:AADN02028742
EMBL:AADN02028743 EMBL:AADN02070525 IPI:IPI00597924
Ensembl:ENSGALT00000004685 ArrayExpress:F1N9E9 Uniprot:F1N9E9
Length = 2114
Score = 137 (53.3 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 24/46 (52%), Positives = 30/46 (65%)
Query: 336 CRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHK 381
C VC G LLCCE+CPA FH EC++ ++P+ W CN CKA K
Sbjct: 1314 CFVCSEGGSLLCCESCPAAFHRECLNI---EMPEGSWYCNDCKAGK 1356
>UNIPROTKB|F1N972 [details] [associations]
symbol:Gga.18314 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IEA]
[GO:0001702 "gastrulation with mouth forming second" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0003712
"transcription cofactor activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0050681 "androgen
receptor binding" evidence=IEA] InterPro:IPR001841 Pfam:PF00856
InterPro:IPR001214 InterPro:IPR001965 InterPro:IPR006560
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50280
PROSITE:PS51215 SMART:SM00184 SMART:SM00249 SMART:SM00317
SMART:SM00570 Pfam:PF00855 GO:GO:0005634 GO:GO:0045893
GO:GO:0046872 GO:GO:0008270 GO:GO:0003682 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0003712
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968
GeneTree:ENSGT00700000104009 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 EMBL:AADN02028734 EMBL:AADN02028735 EMBL:AADN02028736
EMBL:AADN02028737 EMBL:AADN02028738 EMBL:AADN02028739
EMBL:AADN02028740 EMBL:AADN02028741 EMBL:AADN02028742
EMBL:AADN02028743 EMBL:AADN02070525 IPI:IPI00581947
Ensembl:ENSGALT00000004699 OMA:KYYHEEC ArrayExpress:F1N972
Uniprot:F1N972
Length = 2205
Score = 137 (53.3 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 24/46 (52%), Positives = 30/46 (65%)
Query: 336 CRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHK 381
C VC G LLCCE+CPA FH EC++ ++P+ W CN CKA K
Sbjct: 1421 CFVCSEGGSLLCCESCPAAFHRECLNI---EMPEGSWYCNDCKAGK 1463
>FB|FBgn0023097 [details] [associations]
symbol:bon "bonus" species:7227 "Drosophila melanogaster"
[GO:0003713 "transcription coactivator activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS;IDA] [GO:0007422 "peripheral
nervous system development" evidence=TAS] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0006325 "chromatin organization" evidence=IMP]
[GO:0048813 "dendrite morphogenesis" evidence=IMP] [GO:0048666
"neuron development" evidence=IMP] [GO:0007411 "axon guidance"
evidence=IMP] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF00643
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00249 SMART:SM00297
SMART:SM00336 SMART:SM00502 GO:GO:0005634 GO:GO:0007411
GO:GO:0046872 GO:GO:0008270 GO:GO:0007422 GO:GO:0003682
GO:GO:0048813 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0006325 Gene3D:1.20.920.10 SUPFAM:SSF47370
HSSP:Q9UIG0 FlyBase:FBgn0023097 EMBL:AF210315
ProteinModelPortal:Q9U3Y7 SMR:Q9U3Y7 STRING:Q9U3Y7 PRIDE:Q9U3Y7
InParanoid:Q9U3Y7 OrthoDB:EOG48KPS6 ArrayExpress:Q9U3Y7 Bgee:Q9U3Y7
Uniprot:Q9U3Y7
Length = 1133
Score = 133 (51.9 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 23/47 (48%), Positives = 28/47 (59%)
Query: 333 DDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQED--WQCNLC 377
+D C VC GEL+CC+ CP VFH C P + +P E WQC LC
Sbjct: 897 EDWCAVCLDGGELMCCDKCPKVFHQNCHIPAISSLPDESESWQCLLC 943
Score = 47 (21.6 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 18/68 (26%), Positives = 27/68 (39%)
Query: 11 PPKTPNTERPKFQVHLLKK---PQYLQNLEARGLNSPITSRTSSPQGSETSRRSTAKKGT 67
PP+T + + +H L K PQ Q P+ + Q SE + S T
Sbjct: 709 PPQT-SPQLGGGGMHSLAKWHIPQSAQQSNMCSQQGPLLPFANGRQTSENFKISLKSPNT 767
Query: 68 KRKSNPPT 75
+ S PP+
Sbjct: 768 LKNSTPPS 775
>UNIPROTKB|E2R3Q9 [details] [associations]
symbol:NSD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF00856 InterPro:IPR001214 InterPro:IPR001965
InterPro:IPR006560 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184 SMART:SM00249
SMART:SM00317 SMART:SM00570 Pfam:PF00855 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GeneTree:ENSGT00700000104009
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 CTD:64324
KO:K15588 OMA:NIDKMRH EMBL:AAEX03002967 EMBL:AAEX03002968
EMBL:AAEX03002969 EMBL:AAEX03002970 RefSeq:XP_865778.1
Ensembl:ENSCAFT00000026110 GeneID:489094 KEGG:cfa:489094
Uniprot:E2R3Q9
Length = 2698
Score = 141 (54.7 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 24/46 (52%), Positives = 31/46 (67%)
Query: 336 CRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHK 381
C VC G LLCC++CPA FH EC++ D+P+ +W CN CKA K
Sbjct: 1711 CFVCSEGGSLLCCDSCPAAFHRECLNI---DIPEGNWYCNDCKAGK 1753
Score = 46 (21.3 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 19/79 (24%), Positives = 33/79 (41%)
Query: 235 TIFREEDTQQTHFGPLDQK-DSANSVLYFIDAMTWPEALRSYIESDKTFDEEVLNILNTC 293
+I D + P+D +S NSVL DA E + S +++K +
Sbjct: 637 SICTTSDDGSSDLDPIDNSSESDNSVLEITDAFDRTENMLSVQKNEK---------VKYT 687
Query: 294 EYPFTNIEKRLRVLQFLTD 312
YP TN + + + +T+
Sbjct: 688 RYPATNTKVKAKQKSLITN 706
>UNIPROTKB|H7C0U2 [details] [associations]
symbol:ZMYND8 "Protein kinase C-binding protein 1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR002893
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF01753
PRINTS:PR00503 PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50865 SMART:SM00249 SMART:SM00297 Pfam:PF00855
EMBL:CH471077 GO:GO:0046872 GO:GO:0008270 GO:GO:0016301
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.20.920.10 SUPFAM:SSF47370 InterPro:IPR000313
PROSITE:PS50812 EMBL:AL049540 EMBL:AL031666 UniGene:Hs.446240
UniGene:Hs.658553 UniGene:Hs.668465 HGNC:HGNC:9397
InterPro:IPR021931 Pfam:PF12064 EMBL:AL390212 SMR:H7C0U2
Ensembl:ENST00000446994 Uniprot:H7C0U2
Length = 1105
Score = 133 (51.9 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 22/46 (47%), Positives = 30/46 (65%)
Query: 333 DDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCK 378
D +C VCHR G++LCCE CP V+H +C+ L P+ DW C C+
Sbjct: 63 DFYCWVCHREGQVLCCELCPRVYHAKCLR--LTSEPEGDWFCPECE 106
>POMBASE|SPBP19A11.06 [details] [associations]
symbol:lid2 "Lid2 complex subunit, predicted histone
demethylase Lid2" species:4896 "Schizosaccharomyces pombe"
[GO:0000070 "mitotic sister chromatid segregation" evidence=IMP]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0019787 "small conjugating protein ligase
activity" evidence=ISM] [GO:0030466 "chromatin silencing at silent
mating-type cassette" evidence=IMP] [GO:0030702 "chromatin
silencing at centromere" evidence=IMP] [GO:0031507 "heterochromatin
assembly" evidence=IMP] [GO:0031618 "nuclear centromeric
heterochromatin" evidence=IDA] [GO:0031934 "mating-type region
heterochromatin" evidence=IDA] [GO:0034630 "RITS complex
localization" evidence=IMP] [GO:0034647 "histone demethylase
activity (H3-trimethyl-K4 specific)" evidence=IDA] [GO:0048189
"Lid2 complex" evidence=IDA] [GO:0051567 "histone H3-K9
methylation" evidence=IMP] [GO:0051572 "negative regulation of
histone H3-K4 methylation" evidence=IMP] InterPro:IPR001841
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51011 PROSITE:PS51184
SMART:SM00184 SMART:SM00249 SMART:SM00558 PomBase:SPBP19A11.06
Prosite:PS00518 GO:GO:0046872 GO:GO:0003677 EMBL:CU329671
GO:GO:0008270 GO:GO:0006351 GenomeReviews:CU329671_GR GO:GO:0030466
GO:GO:0030702 GO:GO:0000070 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0031934 GO:GO:0051567
Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0048189 GO:GO:0019787
GO:GO:0031507 GO:GO:0051572 GO:GO:0031618 PROSITE:PS51183
GO:GO:0034630 eggNOG:NOG327026 GO:GO:0034647 OrthoDB:EOG44N21B
KO:K11446 PIR:T50313 RefSeq:NP_596174.1 ProteinModelPortal:Q9HDV4
IntAct:Q9HDV4 STRING:Q9HDV4 EnsemblFungi:SPBP19A11.06.1
GeneID:2541299 KEGG:spo:SPBP19A11.06 OMA:LPCVIRE NextBio:20802409
Uniprot:Q9HDV4
Length = 1513
Score = 134 (52.2 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 23/68 (33%), Positives = 39/68 (57%)
Query: 311 TDQILITSPVREDLIHEGGFQYDDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQE 370
T Q+ ++ ++ LI G + ++C + +L C+ C A +H C+DPPL +P+E
Sbjct: 251 TIQVNGSTSLKRPLIERG--EQCEYCGLDKNPETILLCDGCEAAYHTSCLDPPLTSIPKE 308
Query: 371 DWQCNLCK 378
DW C+ CK
Sbjct: 309 DWYCDACK 316
>UNIPROTKB|J9P712 [details] [associations]
symbol:PHRF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016 PROSITE:PS50089
SMART:SM00184 SMART:SM00249 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR017907
GeneTree:ENSGT00530000063661 EMBL:AAEX03011329
Ensembl:ENSCAFT00000046673 Uniprot:J9P712
Length = 1626
Score = 133 (51.9 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 35/107 (32%), Positives = 49/107 (45%)
Query: 291 NTCEYPFTNIEKRLRVLQFLTDQILITSPVREDLIHEGGFQYDDHCRVC---HRVGELLC 347
N+C T I K + + +IL PV E + C VC R LL
Sbjct: 138 NSCPVDRT-IFKCICIRARFGGKILKKIPVENARAGEEEEEDPTFCEVCGRSDREDRLLL 196
Query: 348 CETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHKVTGVTDCLPDVEK 394
C+ C A +H+EC+DPPL++VP ++W C C A D P E+
Sbjct: 197 CDGCDAGYHMECLDPPLQEVPVDEWFCPECAAPGAAADADAGPVSEE 243
>UNIPROTKB|F1PXY6 [details] [associations]
symbol:PHRF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016 PROSITE:PS50089
SMART:SM00184 SMART:SM00249 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR017907 OMA:YMKKLHM
GeneTree:ENSGT00530000063661 EMBL:AAEX03011329
Ensembl:ENSCAFT00000010559 Uniprot:F1PXY6
Length = 1637
Score = 133 (51.9 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 35/107 (32%), Positives = 49/107 (45%)
Query: 291 NTCEYPFTNIEKRLRVLQFLTDQILITSPVREDLIHEGGFQYDDHCRVC---HRVGELLC 347
N+C T I K + + +IL PV E + C VC R LL
Sbjct: 147 NSCPVDRT-IFKCICIRARFGGKILKKIPVENARAGEEEEEDPTFCEVCGRSDREDRLLL 205
Query: 348 CETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHKVTGVTDCLPDVEK 394
C+ C A +H+EC+DPPL++VP ++W C C A D P E+
Sbjct: 206 CDGCDAGYHMECLDPPLQEVPVDEWFCPECAAPGAAADADAGPVSEE 252
>UNIPROTKB|I3LU11 [details] [associations]
symbol:PHRF1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR002219
InterPro:IPR019787 Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016
PROSITE:PS50089 SMART:SM00109 SMART:SM00184 SMART:SM00249
Prosite:PS00518 GO:GO:0035556 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR017907 OMA:YMKKLHM
GeneTree:ENSGT00530000063661 EMBL:FP015900
Ensembl:ENSSSCT00000024857 Uniprot:I3LU11
Length = 1643
Score = 133 (51.9 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 31/92 (33%), Positives = 47/92 (51%)
Query: 291 NTCEYPFTNIEKRLRVLQFLTDQILITSPVREDLIHEGGFQYDDHCRVC---HRVGELLC 347
N+C T + K + + L +IL PV + E + C VC R LL
Sbjct: 141 NSCPVDRT-VFKCICIRAQLGGKILRKIPVENPRLGEHEEEDPTFCEVCGRSDREDRLLL 199
Query: 348 CETCPAVFHLECVDPPLRDVPQEDWQCNLCKA 379
C+ C A +H+EC++PPL++VP ++W C C A
Sbjct: 200 CDGCDAGYHMECLEPPLQEVPVDEWFCPECTA 231
>UNIPROTKB|E9PJ24 [details] [associations]
symbol:PHRF1 "PHD and RING finger domain-containing protein
1" species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016
PROSITE:PS50089 SMART:SM00184 SMART:SM00249 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR017907 EMBL:AP006284 HGNC:HGNC:24351
ChiTaRS:PHRF1 IPI:IPI00978364 Ensembl:ENST00000533464
UCSC:uc010qwe.2 ArrayExpress:E9PJ24 Bgee:E9PJ24 Uniprot:E9PJ24
Length = 1645
Score = 133 (51.9 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 26/62 (41%), Positives = 35/62 (56%)
Query: 336 CRVC---HRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHKVTGVTDCLPDV 392
C VC R LL C+ C A +H+EC+DPPL++VP ++W C C A V D P
Sbjct: 182 CEVCGRSDREDRLLLCDGCDAGYHMECLDPPLQEVPVDEWFCPECAAPGVVLAADAGPVS 241
Query: 393 EK 394
E+
Sbjct: 242 EE 243
>UNIPROTKB|F8WEF5 [details] [associations]
symbol:PHRF1 "PHD and RING finger domain-containing protein
1" species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016
PROSITE:PS50089 SMART:SM00184 SMART:SM00249 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR017907 EMBL:AP006284
HGNC:HGNC:24351 ChiTaRS:PHRF1 IPI:IPI01013297
Ensembl:ENST00000413872 UCSC:uc009ybz.1 ArrayExpress:F8WEF5
Bgee:F8WEF5 Uniprot:F8WEF5
Length = 1647
Score = 133 (51.9 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 26/62 (41%), Positives = 35/62 (56%)
Query: 336 CRVC---HRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHKVTGVTDCLPDV 392
C VC R LL C+ C A +H+EC+DPPL++VP ++W C C A V D P
Sbjct: 185 CEVCGRSDREDRLLLCDGCDAGYHMECLDPPLQEVPVDEWFCPECAAPGVVLAADAGPVS 244
Query: 393 EK 394
E+
Sbjct: 245 EE 246
>UNIPROTKB|Q9P1Y6 [details] [associations]
symbol:PHRF1 "PHD and RING finger domain-containing protein
1" species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=IEA]
[GO:0070063 "RNA polymerase binding" evidence=ISS]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016 PROSITE:PS50089
SMART:SM00184 SMART:SM00249 Prosite:PS00518 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 GO:GO:0006397 GO:GO:0006366
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS01359 InterPro:IPR017907 EMBL:AP006284
PharmGKB:PA164718737 HSSP:Q9UIG0 EMBL:AB040975 EMBL:BC004950
EMBL:BC013381 EMBL:BC029651 EMBL:BC041631 EMBL:BC136615
EMBL:BC144293 EMBL:BC146771 IPI:IPI00001813 IPI:IPI00827706
IPI:IPI00942878 RefSeq:NP_065952.2 UniGene:Hs.325838
ProteinModelPortal:Q9P1Y6 SMR:Q9P1Y6 IntAct:Q9P1Y6 STRING:Q9P1Y6
PhosphoSite:Q9P1Y6 DMDM:296439275 PaxDb:Q9P1Y6 PRIDE:Q9P1Y6
Ensembl:ENST00000264555 Ensembl:ENST00000416188
Ensembl:ENST00000534320 GeneID:57661 KEGG:hsa:57661 UCSC:uc001lqe.3
UCSC:uc010qwc.2 CTD:57661 GeneCards:GC11P000567 H-InvDB:HIX0201594
HGNC:HGNC:24351 HPA:HPA019867 MIM:611780 neXtProt:NX_Q9P1Y6
PharmGKB:PA164724459 eggNOG:NOG300312 HOVERGEN:HBG108250
InParanoid:Q9P1Y6 OMA:YMKKLHM OrthoDB:EOG4MSD0F ChiTaRS:PHRF1
GenomeRNAi:57661 NextBio:64425 ArrayExpress:Q9P1Y6 Bgee:Q9P1Y6
CleanEx:HS_PHRF1 Genevestigator:Q9P1Y6 GO:GO:0070063 Uniprot:Q9P1Y6
Length = 1649
Score = 133 (51.9 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 26/62 (41%), Positives = 35/62 (56%)
Query: 336 CRVC---HRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHKVTGVTDCLPDV 392
C VC R LL C+ C A +H+EC+DPPL++VP ++W C C A V D P
Sbjct: 186 CEVCGRSDREDRLLLCDGCDAGYHMECLDPPLQEVPVDEWFCPECAAPGVVLAADAGPVS 245
Query: 393 EK 394
E+
Sbjct: 246 EE 247
>DICTYBASE|DDB_G0282237 [details] [associations]
symbol:DDB_G0282237 "DDT domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] dictyBase:DDB_G0282237 GO:GO:0005634
EMBL:AAFI02000046 InterPro:IPR004022 InterPro:IPR018501
InterPro:IPR013136 Pfam:PF02791 Pfam:PF10537 PROSITE:PS50827
PROSITE:PS51136 eggNOG:NOG302161 RefSeq:XP_640302.1 PRIDE:Q54ST3
EnsemblProtists:DDB0216395 GeneID:8623478 KEGG:ddi:DDB_G0282237
InParanoid:Q54ST3 OMA:LYRQRVW Uniprot:Q54ST3
Length = 885
Score = 121 (47.7 bits), Expect = 5.8e-05, Sum P(3) = 5.8e-05
Identities = 31/110 (28%), Positives = 51/110 (46%)
Query: 170 ELPRSSDDLLIPREYVMQTLSIYEVLRHFKSLIRLSPFRFEDFCAVLNFEEQSNLLVEIH 229
E P +S D L ++ L HF+ ++ LSPF +DF + ++N+LVE H
Sbjct: 431 ERPIASSDFFCLSNTFGDFLMVWHFLNHFEKVLLLSPFPLDDFEMAIQHHTETNILVESH 490
Query: 230 VSLLKTIFREEDTQQTHFGPLDQKDSANSVLYFIDAMTWPEALRSYIESD 279
+ L+KTIF T ++ +K I W LR+Y +++
Sbjct: 491 IRLMKTIF----TLPSYSSGTPKKTFGGKA---ITDRNWLATLRAYFQNE 533
Score = 48 (22.0 bits), Expect = 5.8e-05, Sum P(3) = 5.8e-05
Identities = 9/39 (23%), Positives = 21/39 (53%)
Query: 286 VLNILNTCEYPFTNIEKRLRVLQFLTDQILITSPVREDL 324
+ +L Y ++E+R+ +L +L Q + + +R+ L
Sbjct: 644 ICKVLKKKNYFKLSVEERIYILAYLVKQTIASEKIRKHL 682
Score = 46 (21.3 bits), Expect = 5.8e-05, Sum P(3) = 5.8e-05
Identities = 9/16 (56%), Positives = 10/16 (62%)
Query: 400 RQEHLGFDRAGRKYWF 415
R E LG DR R YW+
Sbjct: 773 RLESLGRDRNYRNYWY 788
>ZFIN|ZDB-GENE-080519-3 [details] [associations]
symbol:nsd1a "nuclear receptor binding SET domain
protein 1a" species:7955 "Danio rerio" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0032259 "methylation" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] InterPro:IPR001841 Pfam:PF00856 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR006560 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50280 PROSITE:PS51215
SMART:SM00184 SMART:SM00249 SMART:SM00317 SMART:SM00570
Pfam:PF00855 ZFIN:ZDB-GENE-080519-3 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GeneTree:ENSGT00700000104009
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 KO:K15588
EMBL:CU633762 EMBL:CU655965 EMBL:CU659412 IPI:IPI00512787
RefSeq:XP_683890.4 UniGene:Dr.83733 Ensembl:ENSDART00000084114
GeneID:556086 KEGG:dre:556086 CTD:556086 NextBio:20881309
ArrayExpress:F1QA79 Bgee:F1QA79 Uniprot:F1QA79
Length = 2055
Score = 137 (53.3 bits), Expect = 7.7e-05, Sum P(2) = 7.7e-05
Identities = 26/54 (48%), Positives = 32/54 (59%)
Query: 336 CRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHKVTGVTDCL 389
C VC G LLCCE+CPA FH EC++ ++PQ W CN C+A K D L
Sbjct: 1393 CFVCSEGGSLLCCESCPAAFHRECLNI---EMPQGSWFCNDCRAGKKPHYKDIL 1443
Score = 44 (20.5 bits), Expect = 7.7e-05, Sum P(2) = 7.7e-05
Identities = 10/32 (31%), Positives = 18/32 (56%)
Query: 43 SPITSRTSSPQGSETSRRSTAKKGTKRKSNPP 74
S + +TS+P S+ S+ + K K++S P
Sbjct: 821 SSLPGKTSTPNNSKQSK-AKLKSTVKKESQKP 851
Score = 42 (19.8 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 14/40 (35%), Positives = 20/40 (50%)
Query: 144 NKKFSYISRMSPEPLWLQTERQIQPLELPRSSDDLLIPRE 183
N KFS + + L E++ +PL LP +S LI E
Sbjct: 759 NYKFSTFLMLLKD-LHDSREKEGKPLTLPPTSPSSLIKEE 797
>UNIPROTKB|E1C6X8 [details] [associations]
symbol:WHSC1L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] InterPro:IPR001841
Pfam:PF00856 InterPro:IPR001214 InterPro:IPR001965
InterPro:IPR006560 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184 SMART:SM00249
SMART:SM00317 SMART:SM00570 Pfam:PF00855 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0018024 InterPro:IPR003616 SMART:SM00508
PROSITE:PS50868 GeneTree:ENSGT00700000104009 InterPro:IPR000313
PROSITE:PS50812 SMART:SM00293 CTD:54904 KO:K11425 OMA:MEKDIHK
EMBL:AADN02054858 IPI:IPI00603343 RefSeq:XP_001232891.1
UniGene:Gga.29652 UniGene:Gga.53440 Ensembl:ENSGALT00000005228
GeneID:426778 KEGG:gga:426778 NextBio:20828194 Uniprot:E1C6X8
Length = 1436
Score = 130 (50.8 bits), Expect = 8.0e-05, Sum P(2) = 8.0e-05
Identities = 23/43 (53%), Positives = 30/43 (69%)
Query: 339 CHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHK 381
C + G+LLCCE+CPA FH EC++ D+P+ W CN CKA K
Sbjct: 916 CEKGGKLLCCESCPASFHPECLNI---DMPEGCWNCNDCKAGK 955
Score = 48 (22.0 bits), Expect = 8.0e-05, Sum P(2) = 8.0e-05
Identities = 14/62 (22%), Positives = 25/62 (40%)
Query: 13 KTPNTERPKFQVHLLKKPQYLQNLEARGLNSPITSRTSSPQGSETSRRSTAKKGTKRKSN 72
K T K + ++P+ N + N T SP +E R+S ++ + +
Sbjct: 405 KAKKTTASKSETKKNRRPKPALNTQTEHANVV----TGSPSSAELRRQSQRRQSSAEEEE 460
Query: 73 PP 74
PP
Sbjct: 461 PP 462
Score = 41 (19.5 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 12/58 (20%), Positives = 27/58 (46%)
Query: 31 QYLQNLEARGLNSPITSRTSSPQGSETSRRST-AKKGTKRKSNPPTXXXXXXNQKRKQ 87
Q++ + + G + I+ + S +S+R+ A + S+P T + ++KQ
Sbjct: 517 QFVYSTKGVGNKAEISVKGQEKLNSSSSQRNEKATCNVQNASSPETTSGSAGSVEKKQ 574
>UNIPROTKB|J9NUG7 [details] [associations]
symbol:WHSC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF00856 InterPro:IPR009071 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR006560 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS50280
PROSITE:PS51215 SMART:SM00184 SMART:SM00249 SMART:SM00317
SMART:SM00570 Pfam:PF00855 Pfam:PF00505 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GeneTree:ENSGT00700000104009
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 EMBL:AAEX03002459
Ensembl:ENSCAFT00000043831 Uniprot:J9NUG7
Length = 1359
Score = 132 (51.5 bits), Expect = 8.7e-05, Sum P(2) = 8.7e-05
Identities = 23/46 (50%), Positives = 30/46 (65%)
Query: 336 CRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHK 381
C VC + G LLCCE+CPA FH +C++ D+P W CN C+A K
Sbjct: 828 CFVCSKGGSLLCCESCPAAFHPDCLNI---DMPDGSWFCNDCRAGK 870
Score = 45 (20.9 bits), Expect = 8.7e-05, Sum P(2) = 8.7e-05
Identities = 17/47 (36%), Positives = 21/47 (44%)
Query: 50 SSPQGSETSRRSTAKKG--TKRKSNPPTXXXXXXNQKRKQTLETDYH 94
+S Q E S KK TKR + PT + RK+ L TD H
Sbjct: 505 ASSQSEEDSGNINGKKRIHTKR-TQEPTEDADGEDAPRKR-LRTDKH 549
Score = 40 (19.1 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 12/45 (26%), Positives = 20/45 (44%)
Query: 29 KPQYLQNLEARGLNSPITSRTSSPQGSETSRRSTAKKGTKRKSNP 73
KP +N + +S S++SSP S T + G + +P
Sbjct: 590 KPLKKRNRASTAASSTPFSKSSSPSASLTENEVSDGPGDEPLESP 634
>UNIPROTKB|F1PK46 [details] [associations]
symbol:WHSC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF00856 InterPro:IPR009071 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR006560 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS50280
PROSITE:PS51215 SMART:SM00184 SMART:SM00249 SMART:SM00317
SMART:SM00570 Pfam:PF00855 Pfam:PF00505 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GeneTree:ENSGT00700000104009
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 OMA:DVKRCVV
EMBL:AAEX03002459 Ensembl:ENSCAFT00000023738 Uniprot:F1PK46
Length = 1362
Score = 132 (51.5 bits), Expect = 8.8e-05, Sum P(2) = 8.8e-05
Identities = 23/46 (50%), Positives = 30/46 (65%)
Query: 336 CRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHK 381
C VC + G LLCCE+CPA FH +C++ D+P W CN C+A K
Sbjct: 831 CFVCSKGGSLLCCESCPAAFHPDCLNI---DMPDGSWFCNDCRAGK 873
Score = 45 (20.9 bits), Expect = 8.8e-05, Sum P(2) = 8.8e-05
Identities = 17/47 (36%), Positives = 21/47 (44%)
Query: 50 SSPQGSETSRRSTAKKG--TKRKSNPPTXXXXXXNQKRKQTLETDYH 94
+S Q E S KK TKR + PT + RK+ L TD H
Sbjct: 508 ASSQSEEDSGNINGKKRIHTKR-TQEPTEDADGEDAPRKR-LRTDKH 552
Score = 40 (19.1 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 12/45 (26%), Positives = 20/45 (44%)
Query: 29 KPQYLQNLEARGLNSPITSRTSSPQGSETSRRSTAKKGTKRKSNP 73
KP +N + +S S++SSP S T + G + +P
Sbjct: 593 KPLKKRNRASTAASSTPFSKSSSPSASLTENEVSDGPGDEPLESP 637
>UNIPROTKB|G3N175 [details] [associations]
symbol:G3N175 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR000770 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF01342 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50864
SMART:SM00249 SMART:SM00297 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:3.10.390.10 InterPro:IPR010919
SUPFAM:SSF63763 Gene3D:1.20.920.10 SUPFAM:SSF47370
GeneTree:ENSGT00510000046835 EMBL:DAAA02006184
Ensembl:ENSBTAT00000064013 OMA:NCKKFNK Uniprot:G3N175
Length = 258
Score = 120 (47.3 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 22/69 (31%), Positives = 34/69 (49%)
Query: 334 DHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHKVTGVTDCLPDVE 393
D C C G+L CC+TC FH +C PP+ + ++ W C C+ + +G L + E
Sbjct: 78 DVCETCRDGGKLFCCDTCSRSFHEDCHIPPV-ETEKDPWSCTFCRMKESSGNQQGLGESE 136
Query: 394 KSGLLCRQE 402
L + E
Sbjct: 137 VLARLMQSE 145
>UNIPROTKB|E2R0A1 [details] [associations]
symbol:SP110 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005730 "nucleolus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000770 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR004865 InterPro:IPR019787
Pfam:PF01342 Pfam:PF03172 PROSITE:PS50016 PROSITE:PS50864
PROSITE:PS51414 SMART:SM00249 SMART:SM00258 SMART:SM00297
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:3.10.390.10 InterPro:IPR010919 SUPFAM:SSF63763
Gene3D:1.20.920.10 SUPFAM:SSF47370 GeneTree:ENSGT00510000046835
OMA:DGTSEMN EMBL:AAEX03014424 Ensembl:ENSCAFT00000016996
Uniprot:E2R0A1
Length = 682
Score = 126 (49.4 bits), Expect = 0.00011, P = 0.00011
Identities = 20/43 (46%), Positives = 25/43 (58%)
Query: 336 CRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCK 378
C VC R G LLCC+TCP FH +C PP + + W C C+
Sbjct: 532 CEVCCRGGPLLCCDTCPRAFHEDCHIPPA-EAERSPWSCTFCR 573
>WB|WBGene00008081 [details] [associations]
symbol:athp-1 species:6239 "Caenorhabditis elegans"
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0000003 "reproduction" evidence=IMP]
InterPro:IPR000253 InterPro:IPR001965 InterPro:IPR017956
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50006 PROSITE:PS50016
SMART:SM00240 SMART:SM00249 SMART:SM00384 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0000003 Gene3D:2.60.200.20
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 eggNOG:NOG145066
EMBL:Z73424 HSSP:Q13263 PIR:T19918 RefSeq:NP_499397.2
ProteinModelPortal:Q18605 SMR:Q18605 DIP:DIP-27259N IntAct:Q18605
MINT:MINT-1045880 STRING:Q18605 PaxDb:Q18605 EnsemblMetazoa:C44B9.4
GeneID:176517 KEGG:cel:CELE_C44B9.4 UCSC:C44B9.4 CTD:176517
WormBase:C44B9.4 GeneTree:ENSGT00530000069671 HOGENOM:HOG000021274
InParanoid:Q18605 OMA:IAIQRCL NextBio:892916 Uniprot:Q18605
Length = 1150
Score = 128 (50.1 bits), Expect = 0.00012, P = 0.00012
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 336 CRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCK 378
C +C G +LCCE CPA FHL C+ D+P +++ CN C+
Sbjct: 62 CGICSSGGNILCCEQCPASFHLACIGYESSDLPDDNFYCNRCR 104
>UNIPROTKB|Q18605 [details] [associations]
symbol:athp-1 "Protein ATHP-1" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000253 InterPro:IPR001965 InterPro:IPR017956
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50006 PROSITE:PS50016
SMART:SM00240 SMART:SM00249 SMART:SM00384 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0000003 Gene3D:2.60.200.20
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 eggNOG:NOG145066
EMBL:Z73424 HSSP:Q13263 PIR:T19918 RefSeq:NP_499397.2
ProteinModelPortal:Q18605 SMR:Q18605 DIP:DIP-27259N IntAct:Q18605
MINT:MINT-1045880 STRING:Q18605 PaxDb:Q18605 EnsemblMetazoa:C44B9.4
GeneID:176517 KEGG:cel:CELE_C44B9.4 UCSC:C44B9.4 CTD:176517
WormBase:C44B9.4 GeneTree:ENSGT00530000069671 HOGENOM:HOG000021274
InParanoid:Q18605 OMA:IAIQRCL NextBio:892916 Uniprot:Q18605
Length = 1150
Score = 128 (50.1 bits), Expect = 0.00012, P = 0.00012
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 336 CRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCK 378
C +C G +LCCE CPA FHL C+ D+P +++ CN C+
Sbjct: 62 CGICSSGGNILCCEQCPASFHLACIGYESSDLPDDNFYCNRCR 104
>ASPGD|ASPL0000065953 [details] [associations]
symbol:AN7300 species:162425 "Emericella nidulans"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0035556 "intracellular signal
transduction" evidence=IEA] InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 SMART:SM00249 GO:GO:0046872
GO:GO:0008270 EMBL:BN001304 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 EMBL:AACD01000127 eggNOG:NOG145066
OrthoDB:EOG4N6053 RefSeq:XP_680569.1 ProteinModelPortal:Q5AWN0
EnsemblFungi:CADANIAT00000138 GeneID:2870174 KEGG:ani:AN7300.2
HOGENOM:HOG000168186 OMA:PPEGDWF Uniprot:Q5AWN0
Length = 841
Score = 129 (50.5 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 24/65 (36%), Positives = 35/65 (53%)
Query: 333 DDHCRVCHRVGELLCCETCPAVFHLECVDPPL--RDVPQEDWQCNLCKAHKVTGVTDCLP 390
+D CR C + G LLCC+ C +H C++PPL + P+ DW C C K + L
Sbjct: 450 NDFCRQCEKSGRLLCCDGCVYSYHFSCLNPPLDPANPPEGDWFCPKCSVSK--SLNTLLG 507
Query: 391 DVEKS 395
+EK+
Sbjct: 508 GMEKT 512
Score = 42 (19.8 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 13/38 (34%), Positives = 17/38 (44%)
Query: 48 RTSSPQGSETSRRSTAKKGTKRKSNPPTXXXXXXNQKR 85
R+SS S SR ST T ++P T Q+R
Sbjct: 6 RSSSHARSNDSRPSTPVPHTANMASPFTESTRPRKQRR 43
Score = 38 (18.4 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 7/29 (24%), Positives = 12/29 (41%)
Query: 47 SRTSSPQGSETSRRSTAKKGTKRKSNPPT 75
S +P + +G K+ +PPT
Sbjct: 140 SHPGTPSIPAVKEKQPVSEGEKKDDSPPT 168
>RGD|1307748 [details] [associations]
symbol:Nsd1 "nuclear receptor binding SET domain protein 1"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0001702 "gastrulation with mouth forming second"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003682 "chromatin binding" evidence=IEA;ISO] [GO:0003712
"transcription cofactor activity" evidence=IEA;ISO] [GO:0003714
"transcription corepressor activity" evidence=ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0008270 "zinc ion binding" evidence=IEA;ISO] [GO:0010452
"histone H3-K36 methylation" evidence=ISO] [GO:0016571 "histone
methylation" evidence=ISO] [GO:0016922 "ligand-dependent nuclear
receptor binding" evidence=ISO] [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] [GO:0030331 "estrogen
receptor binding" evidence=ISO] [GO:0042054 "histone
methyltransferase activity" evidence=ISO] [GO:0042799 "histone
methyltransferase activity (H4-K20 specific)" evidence=ISO]
[GO:0042974 "retinoic acid receptor binding" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA;ISO] [GO:0046965 "retinoid X receptor binding"
evidence=ISO] [GO:0046966 "thyroid hormone receptor binding"
evidence=ISO] [GO:0046975 "histone methyltransferase activity
(H3-K36 specific)" evidence=ISO] [GO:0050681 "androgen receptor
binding" evidence=IEA;ISO] InterPro:IPR001841 Pfam:PF00856
InterPro:IPR001214 InterPro:IPR001965 InterPro:IPR006560
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50089
PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184 SMART:SM00249
SMART:SM00317 SMART:SM00570 Pfam:PF00855 RGD:1307748 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GeneTree:ENSGT00700000104009
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 EMBL:CH474032
CTD:64324 KO:K15588 OrthoDB:EOG49GKFN IPI:IPI00779102
RefSeq:NP_001100807.1 UniGene:Rn.224915 Ensembl:ENSRNOT00000060928
GeneID:306764 KEGG:rno:306764 UCSC:RGD:1307748 NextBio:656473
Uniprot:D4AA06
Length = 2381
Score = 141 (54.7 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 24/46 (52%), Positives = 31/46 (67%)
Query: 336 CRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHK 381
C VC G LLCC++CPA FH EC++ D+P+ +W CN CKA K
Sbjct: 1400 CFVCSEGGSLLCCDSCPAAFHRECLNI---DIPEGNWYCNDCKAGK 1442
Score = 39 (18.8 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 6/24 (25%), Positives = 13/24 (54%)
Query: 2 YGRIKRRGRPPKTPNTERPKFQVH 25
Y R+K+ +TP++ + +H
Sbjct: 1172 YKRVKKEDSARETPSSAEGELMIH 1195
Score = 38 (18.4 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 10/24 (41%), Positives = 12/24 (50%)
Query: 6 KRRGRPPKTPNTERPKFQVHLLKK 29
K G P TP T+ P+ V KK
Sbjct: 938 KETGIPSLTPQTKIPEPAVRSEKK 961
>UNIPROTKB|G3V661 [details] [associations]
symbol:Baz1b "Bromodomain adjacent to zinc finger domain
protein 1B" species:10116 "Rattus norvegicus" [GO:0000793
"condensed chromosome" evidence=IEA] [GO:0003007 "heart
morphogenesis" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0004713 "protein tyrosine kinase activity"
evidence=IEA] [GO:0005721 "centromeric heterochromatin"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0032947 "protein complex scaffold" evidence=IEA] [GO:0034725
"DNA replication-dependent nucleosome disassembly" evidence=IEA]
[GO:0035173 "histone kinase activity" evidence=IEA] [GO:0042809
"vitamin D receptor binding" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0043596
"nuclear replication fork" evidence=IEA] [GO:0048096
"chromatin-mediated maintenance of transcription" evidence=IEA]
[GO:0070577 "histone acetyl-lysine binding" evidence=IEA]
[GO:0071778 "WINAC complex" evidence=IEA] [GO:0071884 "vitamin D
receptor activator activity" evidence=IEA] InterPro:IPR001841
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 PROSITE:PS50089 SMART:SM00184 SMART:SM00249
SMART:SM00297 RGD:1597089 GO:GO:0046872 GO:GO:0008270 EMBL:CH473973
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR018500 InterPro:IPR018501
InterPro:IPR013136 Pfam:PF10537 SMART:SM00571 PROSITE:PS50827
PROSITE:PS51136 GeneTree:ENSGT00660000095335 CTD:9031 KO:K11658
OMA:CNKAFHL EMBL:AC090529 RefSeq:NP_001178845.1 UniGene:Rn.7043
Ensembl:ENSRNOT00000001975 GeneID:368002 KEGG:rno:368002
NextBio:691979 Uniprot:G3V661
Length = 1476
Score = 119 (46.9 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 20/46 (43%), Positives = 28/46 (60%)
Query: 336 CRVCHRVGE---LLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCK 378
C+VC + GE L+ C+ C FHL C+ P L +VP +WQC C+
Sbjct: 1184 CKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEVPDGEWQCPACQ 1229
Score = 60 (26.2 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 15/46 (32%), Positives = 25/46 (54%)
Query: 279 DKTFDEEVLNILNTCEYPFTNIEKRLRVLQFLTDQILITSPVREDL 324
D +E L L T E+ E++LR+L L +IL+T V++ +
Sbjct: 719 DNEVQDEFLEKLETSEFFELTSEEKLRILTALCHRILMTYSVQDHM 764
Score = 40 (19.1 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 10/36 (27%), Positives = 17/36 (47%)
Query: 19 RPKFQVHLLKKPQYLQNLEARGLNSPITSRTSSPQG 54
R K + L+K + ++ E G N P +P+G
Sbjct: 564 REKEMLERLEKQKRYEDQELGGRNLPTFRLVDTPEG 599
>MGI|MGI:1353499 [details] [associations]
symbol:Baz1b "bromodomain adjacent to zinc finger domain,
1B" species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000793 "condensed chromosome" evidence=IDA]
[GO:0003007 "heart morphogenesis" evidence=IMP] [GO:0003682
"chromatin binding" evidence=ISO] [GO:0004713 "protein tyrosine
kinase activity" evidence=ISO] [GO:0004715 "non-membrane spanning
protein tyrosine kinase activity" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005721
"centromeric heterochromatin" evidence=IDA] [GO:0006302
"double-strand break repair" evidence=IMP] [GO:0006333 "chromatin
assembly or disassembly" evidence=IDA] [GO:0006337 "nucleosome
disassembly" evidence=ISO] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0006468 "protein phosphorylation"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0016310
"phosphorylation" evidence=IEA] [GO:0016572 "histone
phosphorylation" evidence=ISO] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0032947 "protein complex scaffold" evidence=ISO]
[GO:0034725 "DNA replication-dependent nucleosome disassembly"
evidence=ISO] [GO:0035173 "histone kinase activity" evidence=ISO]
[GO:0042393 "histone binding" evidence=IPI] [GO:0042809 "vitamin D
receptor binding" evidence=ISO] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0048096 "chromatin-mediated maintenance of
transcription" evidence=IMP] [GO:0070577 "histone acetyl-lysine
binding" evidence=ISO] [GO:0071778 "WINAC complex" evidence=ISO]
[GO:0071884 "vitamin D receptor activator activity"
evidence=ISO;IMP] InterPro:IPR001841 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016 SMART:SM00184
SMART:SM00249 SMART:SM00297 MGI:MGI:1353499 GO:GO:0005524
GO:GO:0046872 GO:GO:0003007 GO:GO:0008270 EMBL:CH466529
GO:GO:0006351 GO:GO:0003682 GO:GO:0004715 GO:GO:0004713
GO:GO:0043596 GO:GO:0006333 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0006302 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0005721 GO:GO:0000793 GO:GO:0048096
GO:GO:0016585 GO:GO:0043044 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 eggNOG:COG5076 GO:GO:0070577 InterPro:IPR018359
InterPro:IPR018500 InterPro:IPR018501 InterPro:IPR013136
Pfam:PF10537 SMART:SM00571 PROSITE:PS50827 PROSITE:PS51136
GeneTree:ENSGT00660000095335 CTD:9031 HOVERGEN:HBG050668 KO:K11658
OMA:CNKAFHL OrthoDB:EOG4MKNFK ChiTaRS:BAZ1B GO:GO:0071778
GO:GO:0035173 GO:GO:0071884 GO:GO:0034725 EMBL:AF084480
EMBL:BC141399 EMBL:AK017894 EMBL:AK037737 EMBL:AK137139
EMBL:AK140172 EMBL:AK141305 IPI:IPI00923656 IPI:IPI00930843
PIR:T17401 RefSeq:NP_035844.2 UniGene:Mm.40331
ProteinModelPortal:Q9Z277 SMR:Q9Z277 DIP:DIP-36072N IntAct:Q9Z277
STRING:Q9Z277 PhosphoSite:Q9Z277 PaxDb:Q9Z277 PRIDE:Q9Z277
Ensembl:ENSMUST00000002825 GeneID:22385 KEGG:mmu:22385
UCSC:uc008zxz.2 InParanoid:Q3USR7 NextBio:302753 Bgee:Q9Z277
CleanEx:MM_BAZ1B Genevestigator:Q9Z277
GermOnline:ENSMUSG00000002748 Uniprot:Q9Z277
Length = 1479
Score = 119 (46.9 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 20/46 (43%), Positives = 28/46 (60%)
Query: 336 CRVCHRVGE---LLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCK 378
C+VC + GE L+ C+ C FHL C+ P L +VP +WQC C+
Sbjct: 1187 CKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEVPDGEWQCPACQ 1232
Score = 60 (26.2 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 15/46 (32%), Positives = 25/46 (54%)
Query: 279 DKTFDEEVLNILNTCEYPFTNIEKRLRVLQFLTDQILITSPVREDL 324
D +E L L T E+ E++LR+L L +IL+T V++ +
Sbjct: 722 DNEVQDEFLEKLETSEFFELTSEEKLRILTALCHRILMTYSVQDHM 767
Score = 40 (19.1 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 13/50 (26%), Positives = 21/50 (42%)
Query: 5 IKRRGRPPKTPNTERPKFQVHLLKKPQYLQNLEARGLNSPITSRTSSPQG 54
+K R R ER + L+K + ++ E G N P +P+G
Sbjct: 555 LKERLREKAKERREREMLE--RLEKQKRFEDQELGGRNLPAFRLVDTPEG 602
>UNIPROTKB|D4A3R4 [details] [associations]
symbol:Whsc1l1 "Protein Whsc1l1" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] InterPro:IPR001841
Pfam:PF00856 InterPro:IPR001214 InterPro:IPR001965
InterPro:IPR006560 InterPro:IPR019787 PROSITE:PS50016
PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184 SMART:SM00249
SMART:SM00317 SMART:SM00570 Pfam:PF00855 RGD:1308980 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 IPI:IPI00393216 Ensembl:ENSRNOT00000031675
ArrayExpress:D4A3R4 Uniprot:D4A3R4
Length = 1439
Score = 128 (50.1 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 23/43 (53%), Positives = 28/43 (65%)
Query: 339 CHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHK 381
C + G LLCCE+CPA FH EC+ D+P+ W CN CKA K
Sbjct: 917 CEKGGRLLCCESCPASFHPECLSI---DMPEGCWNCNDCKAGK 956
Score = 48 (22.0 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 18/90 (20%), Positives = 36/90 (40%)
Query: 11 PPKTPNTERPKFQVHLLKKPQYLQNLEARGLNSPITSRTSSPQGSETSRRSTAKKGTK-R 69
P + + K +V ++P+ + N + ++ +SPQ S RR + ++ T
Sbjct: 403 PSQAKKSVTSKAEVKKPRRPRSVGNSQPEQTSA---GEVASPQSSTDPRRQSQRRHTSVE 459
Query: 70 KSNPPTXXXXXXNQKRKQTLETDY--HYGS 97
+ PP +++L H GS
Sbjct: 460 EDGPPPVKIAWRTAAARKSLPASITMHKGS 489
>RGD|1308980 [details] [associations]
symbol:Whsc1l1 "Wolf-Hirschhorn syndrome candidate 1-like 1"
species:10116 "Rattus norvegicus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016571 "histone methylation" evidence=ISO]
[GO:0018024 "histone-lysine N-methyltransferase activity"
evidence=IEA;ISO] [GO:0034968 "histone lysine methylation"
evidence=ISO] InterPro:IPR001841 Pfam:PF00856 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR006560 InterPro:IPR019787
PROSITE:PS50016 PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184
SMART:SM00249 SMART:SM00317 SMART:SM00570 Pfam:PF00855 RGD:1308980
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0018024 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 IPI:IPI00204321 Ensembl:ENSRNOT00000021053
UCSC:RGD:1308980 ArrayExpress:D4AC06 Uniprot:D4AC06
Length = 1443
Score = 128 (50.1 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 23/43 (53%), Positives = 28/43 (65%)
Query: 339 CHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHK 381
C + G LLCCE+CPA FH EC+ D+P+ W CN CKA K
Sbjct: 924 CEKGGRLLCCESCPASFHPECLSI---DMPEGCWNCNDCKAGK 963
Score = 48 (22.0 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 18/90 (20%), Positives = 36/90 (40%)
Query: 11 PPKTPNTERPKFQVHLLKKPQYLQNLEARGLNSPITSRTSSPQGSETSRRSTAKKGTK-R 69
P + + K +V ++P+ + N + ++ +SPQ S RR + ++ T
Sbjct: 410 PSQAKKSVTSKAEVKKPRRPRSVGNSQPEQTSA---GEVASPQSSTDPRRQSQRRHTSVE 466
Query: 70 KSNPPTXXXXXXNQKRKQTLETDY--HYGS 97
+ PP +++L H GS
Sbjct: 467 EDGPPPVKIAWRTAAARKSLPASITMHKGS 496
>UNIPROTKB|F1SMZ1 [details] [associations]
symbol:SP110 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005730 "nucleolus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000770 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR004865 InterPro:IPR019787 Pfam:PF01342 Pfam:PF03172
PROSITE:PS50016 PROSITE:PS50864 PROSITE:PS51414 SMART:SM00249
SMART:SM00258 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:3.10.390.10 InterPro:IPR010919
SUPFAM:SSF63763 Gene3D:1.20.920.10 SUPFAM:SSF47370
GeneTree:ENSGT00510000046835 OMA:DGTSEMN EMBL:CU683888
Ensembl:ENSSSCT00000017706 Uniprot:F1SMZ1
Length = 679
Score = 125 (49.1 bits), Expect = 0.00014, P = 0.00014
Identities = 22/54 (40%), Positives = 27/54 (50%)
Query: 336 CRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHKVTGVTDCL 389
C VC G LLCC+TCP FH C PP + W C C+ + +G CL
Sbjct: 546 CEVCCGGGLLLCCDTCPRAFHENCHIPPAV-AKRRPWSCTFCRMREASGSQRCL 598
>UNIPROTKB|E1BNH7 [details] [associations]
symbol:WHSC1L1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0018024 "histone-lysine N-methyltransferase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF00856
InterPro:IPR001214 InterPro:IPR001965 InterPro:IPR006560
InterPro:IPR019787 PROSITE:PS50016 PROSITE:PS50280 PROSITE:PS51215
SMART:SM00184 SMART:SM00249 SMART:SM00317 SMART:SM00570
Pfam:PF00855 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0018024
InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
GeneTree:ENSGT00700000104009 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 OMA:MEKDIHK EMBL:DAAA02060851 EMBL:DAAA02060847
EMBL:DAAA02060848 EMBL:DAAA02060849 EMBL:DAAA02060850
IPI:IPI00924282 Ensembl:ENSBTAT00000061245 Uniprot:E1BNH7
Length = 1440
Score = 123 (48.4 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 22/43 (51%), Positives = 27/43 (62%)
Query: 339 CHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHK 381
C + G LLCCE+CPA FH EC+ + P+ W CN CKA K
Sbjct: 919 CEKGGRLLCCESCPASFHPECLSI---ETPEGCWNCNDCKAGK 958
Score = 53 (23.7 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 20/79 (25%), Positives = 30/79 (37%)
Query: 21 KFQVHLLKKPQYLQNLEARGLNSPITSRTSSPQGSETSRRSTAKK-GTKRKSNPPTXXXX 79
K +V ++P+ + N++ N+ SSP G+E R S + G PP
Sbjct: 414 KAEVKKPRRPRSVLNVQPEQTNAG--EAASSPSGTEMRRHSQRRHTGVDEDEPPPVKVAW 471
Query: 80 XXNQKRKQT-LETDYHYGS 97
RK H GS
Sbjct: 472 KTAAARKSLPASITMHKGS 490
>RGD|1307955 [details] [associations]
symbol:Whsc1 "Wolf-Hirschhorn syndrome candidate 1"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003149 "membranous septum morphogenesis" evidence=ISO]
[GO:0003289 "atrial septum primum morphogenesis" evidence=ISO]
[GO:0003290 "atrial septum secundum morphogenesis" evidence=ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003682
"chromatin binding" evidence=ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0016568 "chromatin modification" evidence=ISO]
[GO:0018022 "peptidyl-lysine methylation" evidence=ISO] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=ISO]
[GO:0031965 "nuclear membrane" evidence=ISO] [GO:0034968 "histone
lysine methylation" evidence=ISO] [GO:0060348 "bone development"
evidence=ISO] REFSEQ:NM_001191552 Ncbi:NP_001178481
Length = 1346
Score = 126 (49.4 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 22/46 (47%), Positives = 28/46 (60%)
Query: 336 CRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHK 381
C VC + G LLCCE CPA FH +C+ ++P W CN C+A K
Sbjct: 815 CFVCSKGGSLLCCEACPAAFHPDCLSI---EMPDGSWFCNDCRAGK 857
Score = 49 (22.3 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 17/46 (36%), Positives = 22/46 (47%)
Query: 51 SPQGSETSRRSTAKKGT--KRKSNPPTXXXXXXNQKRKQTLETDYH 94
S Q E S ++ KK T KR +PP + RK+ L TD H
Sbjct: 491 SAQSEEDSGNTSGKKRTHTKRTDDPPEDVDVE-DAPRKR-LRTDKH 534
>UNIPROTKB|F1S8S0 [details] [associations]
symbol:WHSC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060348 "bone development" evidence=IEA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003290 "atrial septum secundum morphogenesis" evidence=IEA]
[GO:0003289 "atrial septum primum morphogenesis" evidence=IEA]
[GO:0003149 "membranous septum morphogenesis" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 Pfam:PF00856
InterPro:IPR009071 InterPro:IPR001214 InterPro:IPR001965
InterPro:IPR006560 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184
SMART:SM00249 SMART:SM00317 SMART:SM00570 Pfam:PF00855 Pfam:PF00505
GO:GO:0005730 GO:GO:0046872 GO:GO:0008270 GO:GO:0031965
GO:GO:0003682 GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0003289 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0060348 GO:GO:0018024
InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
GeneTree:ENSGT00700000104009 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 GO:GO:0003149 GO:GO:0003290 OMA:DVKRCVV EMBL:FP102229
EMBL:FP102127 Ensembl:ENSSSCT00000009499 Uniprot:F1S8S0
Length = 1361
Score = 128 (50.1 bits), Expect = 0.00015, P = 0.00015
Identities = 22/46 (47%), Positives = 30/46 (65%)
Query: 336 CRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHK 381
C VC + G LLCCE+CPA FH +C++ ++P W CN C+A K
Sbjct: 830 CFVCSKGGSLLCCESCPAAFHPDCLNI---EMPDGSWFCNDCRAGK 872
>RGD|1583154 [details] [associations]
symbol:LOC686349 "similar to Wolf-Hirschhorn syndrome candidate
1 protein isoform 3" species:10116 "Rattus norvegicus" [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0003149 "membranous septum
morphogenesis" evidence=IEA] [GO:0003289 "atrial septum primum
morphogenesis" evidence=IEA] [GO:0003290 "atrial septum secundum
morphogenesis" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0060348 "bone development"
evidence=IEA] InterPro:IPR001841 Pfam:PF00856 InterPro:IPR009071
InterPro:IPR001214 InterPro:IPR001965 InterPro:IPR006560
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50089
PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184 SMART:SM00249
SMART:SM00317 SMART:SM00570 Pfam:PF00855 Pfam:PF00505 RGD:1583154
GO:GO:0005730 GO:GO:0046872 GO:GO:0008270 GO:GO:0031965
GO:GO:0003682 GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0003289 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0060348 GO:GO:0018024
InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
GeneTree:ENSGT00700000104009 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 GO:GO:0003149 GO:GO:0003290 IPI:IPI00779496
Ensembl:ENSRNOT00000021952 OrthoDB:EOG4V6ZFW ArrayExpress:D4A9J4
Uniprot:D4A9J4
Length = 1366
Score = 126 (49.4 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 22/46 (47%), Positives = 28/46 (60%)
Query: 336 CRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHK 381
C VC + G LLCCE CPA FH +C+ ++P W CN C+A K
Sbjct: 835 CFVCSKGGSLLCCEACPAAFHPDCLSI---EMPDGSWFCNDCRAGK 877
Score = 49 (22.3 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 17/46 (36%), Positives = 22/46 (47%)
Query: 51 SPQGSETSRRSTAKKGT--KRKSNPPTXXXXXXNQKRKQTLETDYH 94
S Q E S ++ KK T KR +PP + RK+ L TD H
Sbjct: 511 SAQSEEDSGNTSGKKRTHTKRTDDPPEDVDVE-DAPRKR-LRTDKH 554
>TAIR|locus:2135575 [details] [associations]
symbol:ORC1B "origin of replication complex 1B"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000808 "origin recognition complex"
evidence=IEA;ISS] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IEA;ISS] [GO:0006260 "DNA replication"
evidence=IEA;ISS] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0009567 "double fertilization forming a zygote and endosperm"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0010385 "double-stranded methylated DNA binding"
evidence=IDA] InterPro:IPR001025 InterPro:IPR001965
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR019787
InterPro:IPR020793 Pfam:PF00004 Pfam:PF00628 Pfam:PF01426
PROSITE:PS50016 PROSITE:PS51038 SMART:SM00249 SMART:SM00382
SMART:SM00439 GO:GO:0005524 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006355 GO:GO:0046872 GO:GO:0006260
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0017111 EMBL:AL161534 eggNOG:COG1474
GO:GO:0009567 EMBL:AL049730 HSSP:Q9UIG0 GO:GO:0010385 KO:K02603
PANTHER:PTHR10763:SF6 GO:GO:0000808 HOGENOM:HOG000030288
ProtClustDB:CLSN2685758 EMBL:AJ426477 IPI:IPI00542580 PIR:E85135
RefSeq:NP_192999.1 UniGene:At.48852 ProteinModelPortal:Q9SU24
SMR:Q9SU24 DIP:DIP-46671N IntAct:Q9SU24 STRING:Q9SU24 PRIDE:Q9SU24
EnsemblPlants:AT4G12620.1 GeneID:826875 KEGG:ath:AT4G12620
TAIR:At4g12620 InParanoid:Q9SU24 OMA:RIILCEP PhylomeDB:Q9SU24
ArrayExpress:Q9SU24 Genevestigator:Q9SU24 Uniprot:Q9SU24
Length = 813
Score = 124 (48.7 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 29/91 (31%), Positives = 48/91 (52%)
Query: 334 DHCRVCHR--VGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHKVTGVTDCL-- 389
+ C++C + ++ C+ C FHL+C+ PPL++VP+ DW C C+ K +G + L
Sbjct: 167 EDCQICFKSDTNIMIECDDCLGGFHLKCLKPPLKEVPEGDWICQFCEVKK-SGQSQTLDL 225
Query: 390 ---PDVEKSGLLCRQEHLGFDR-AGR--KYW 414
P+ +K R++ L D A R K W
Sbjct: 226 PKPPEGKKLARTMREKLLSGDLWAARIDKLW 256
Score = 46 (21.3 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 12/45 (26%), Positives = 23/45 (51%)
Query: 5 IKRRGRPPKTPNTERPKFQVHLLKKPQYLQNLEARGLNSPITSRT 49
I++R R P+ P T+ + + P+ + +++ SPI S T
Sbjct: 76 IRKRERAPRKPTTDVVPSKSKKTETPKKKKKIDSFTPVSPIRSET 120
>MGI|MGI:2142581 [details] [associations]
symbol:Whsc1l1 "Wolf-Hirschhorn syndrome candidate 1-like 1
(human)" species:10090 "Mus musculus" [GO:0005634 "nucleus"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008168 "methyltransferase activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016571 "histone methylation"
evidence=ISO] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0018024 "histone-lysine N-methyltransferase activity"
evidence=ISO] [GO:0032259 "methylation" evidence=IEA] [GO:0034968
"histone lysine methylation" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] Pfam:PF00856 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR006560 InterPro:IPR019787
PROSITE:PS50016 PROSITE:PS50280 PROSITE:PS51215 SMART:SM00249
SMART:SM00317 SMART:SM00570 MGI:MGI:2142581 Pfam:PF00855
GO:GO:0005634 GO:GO:0005694 GO:GO:0006355 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 eggNOG:COG2940 GO:GO:0018024 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GeneTree:ENSGT00700000104009
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 EMBL:AC156990
HOGENOM:HOG000230893 HOVERGEN:HBG079979 CTD:54904 KO:K11425
ChiTaRS:WHSC1L1 EMBL:AK079952 EMBL:AK132725 EMBL:AK156746
EMBL:AK170040 EMBL:AC162367 EMBL:BC064447 IPI:IPI00353681
IPI:IPI00625887 IPI:IPI00974621 IPI:IPI00987793
RefSeq:NP_001001735.1 UniGene:Mm.217337 ProteinModelPortal:Q6P2L6
SMR:Q6P2L6 STRING:Q6P2L6 PhosphoSite:Q6P2L6 PaxDb:Q6P2L6
PRIDE:Q6P2L6 DNASU:234135 Ensembl:ENSMUST00000146919
Ensembl:ENSMUST00000155861 GeneID:234135 KEGG:mmu:234135
UCSC:uc009lgk.1 UCSC:uc009lgm.1 UCSC:uc009lgp.1 InParanoid:Q6P2L6
NextBio:382034 Bgee:Q6P2L6 Genevestigator:Q6P2L6
GermOnline:ENSMUSG00000054823 Uniprot:Q6P2L6
Length = 1439
Score = 128 (50.1 bits), Expect = 0.00016, P = 0.00016
Identities = 23/43 (53%), Positives = 28/43 (65%)
Query: 339 CHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHK 381
C + G LLCCE+CPA FH EC+ D+P+ W CN CKA K
Sbjct: 917 CEKGGRLLCCESCPASFHPECLSI---DMPEGCWNCNDCKAGK 956
>ZFIN|ZDB-GENE-050324-2 [details] [associations]
symbol:whsc1l1 "Wolf-Hirschhorn syndrome candidate
1-like 1" species:7955 "Danio rerio" [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0032259 "methylation" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] InterPro:IPR001841 Pfam:PF00856 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR006560 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50280 PROSITE:PS51215
SMART:SM00184 SMART:SM00249 SMART:SM00317 SMART:SM00570
Pfam:PF00855 ZFIN:ZDB-GENE-050324-2 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GeneTree:ENSGT00700000104009
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 EMBL:BX294119
EMBL:CT027767 IPI:IPI00803597 Ensembl:ENSDART00000091115
Bgee:F1QV68 Uniprot:F1QV68
Length = 1521
Score = 106 (42.4 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 19/39 (48%), Positives = 24/39 (61%)
Query: 343 GELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHK 381
G LLCCE CPA FH EC+ ++P+ W C CK+ K
Sbjct: 993 GRLLCCEACPASFHPECLKI---EMPEGTWLCGECKSGK 1028
Score = 71 (30.1 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 22/75 (29%), Positives = 35/75 (46%)
Query: 11 PPKTPNTERPKFQVHLLKKPQYLQN-LEARGLNSPITSRTSSPQGSETSRRSTAKKGTKR 69
P KT + ERP +V K P+ N EA +S R +SP G ++A++ T+R
Sbjct: 630 PKKTESEERPSSRV---KSPEGSSNKAEAETCSSE-EERAASPSGWSDQEHTSAEQSTER 685
Query: 70 KSNPPTXXXXXXNQK 84
K + ++K
Sbjct: 686 KQQRRSVRSRSESEK 700
>UNIPROTKB|Q96L73 [details] [associations]
symbol:NSD1 "Histone-lysine N-methyltransferase, H3
lysine-36 and H4 lysine-20 specific" species:9606 "Homo sapiens"
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0001702 "gastrulation with mouth forming second" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0016571 "histone methylation" evidence=ISS] [GO:0016922
"ligand-dependent nuclear receptor binding" evidence=ISS]
[GO:0042799 "histone methyltransferase activity (H4-K20 specific)"
evidence=ISS] [GO:0042974 "retinoic acid receptor binding"
evidence=ISS] [GO:0046965 "retinoid X receptor binding"
evidence=ISS] [GO:0046966 "thyroid hormone receptor binding"
evidence=ISS] [GO:0046975 "histone methyltransferase activity
(H3-K36 specific)" evidence=ISS;IDA] [GO:0050681 "androgen receptor
binding" evidence=IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0003712
"transcription cofactor activity" evidence=IDA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0030331 "estrogen receptor binding"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=IDA]
[GO:0010452 "histone H3-K36 methylation" evidence=ISS;IDA]
[GO:0034770 "histone H4-K20 methylation" evidence=ISS]
InterPro:IPR001841 Pfam:PF00856 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR006560 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50280 PROSITE:PS51215
SMART:SM00184 SMART:SM00249 SMART:SM00317 SMART:SM00570
Pfam:PF00855 GO:GO:0005634 GO:GO:0003714 GO:GO:0005694
GO:GO:0045893 GO:GO:0046872 GO:GO:0008270 GO:GO:0006351
GO:GO:0003682 GO:GO:0000122 GO:GO:0001702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0050681 GO:GO:0030331
GO:GO:0046966 eggNOG:COG2940 InterPro:IPR003616 SMART:SM00508
PROSITE:PS50868 GO:GO:0042799 InterPro:IPR000313 PROSITE:PS50812
GO:GO:0016922 GO:GO:0046965 SMART:SM00293 GO:GO:0046975 MIM:130650
Orphanet:3447 Orphanet:821 EMBL:AF380302 EMBL:AY049721
EMBL:AF395588 EMBL:AF322907 IPI:IPI00102107 IPI:IPI00173901
IPI:IPI00332367 RefSeq:NP_071900.2 RefSeq:NP_758859.1
UniGene:Hs.106861 PDB:3OOI PDBsum:3OOI ProteinModelPortal:Q96L73
SMR:Q96L73 DIP:DIP-58517N IntAct:Q96L73 STRING:Q96L73
PhosphoSite:Q96L73 DMDM:32469769 PaxDb:Q96L73 PRIDE:Q96L73
Ensembl:ENST00000347982 Ensembl:ENST00000354179
Ensembl:ENST00000361032 Ensembl:ENST00000439151 GeneID:64324
KEGG:hsa:64324 UCSC:uc003mfr.4 UCSC:uc003mfs.1 UCSC:uc003mft.4
CTD:64324 GeneCards:GC05P176560 HGNC:HGNC:14234 MIM:117550
MIM:277590 MIM:606681 neXtProt:NX_Q96L73 Orphanet:228415
Orphanet:238613 PharmGKB:PA31790 HOGENOM:HOG000113857
HOVERGEN:HBG007518 InParanoid:Q96L73 KO:K15588 OMA:NIDKMRH
OrthoDB:EOG49GKFN PhylomeDB:Q96L73 ChiTaRS:NSD1 GenomeRNAi:64324
NextBio:66241 ArrayExpress:Q96L73 Bgee:Q96L73 CleanEx:HS_NSD1
Genevestigator:Q96L73 GermOnline:ENSG00000165671 Uniprot:Q96L73
Length = 2696
Score = 141 (54.7 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 24/46 (52%), Positives = 31/46 (67%)
Query: 336 CRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHK 381
C VC G LLCC++CPA FH EC++ D+P+ +W CN CKA K
Sbjct: 1710 CFVCSEGGSLLCCDSCPAAFHRECLNI---DIPEGNWYCNDCKAGK 1752
Score = 39 (18.8 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 13/47 (27%), Positives = 22/47 (46%)
Query: 235 TIFREEDTQQTHFGPLDQK-DSANSVLYFIDAMTWPEALRSYIESDK 280
+I D + P++ +S NSVL DA E + S +++K
Sbjct: 637 SICTTSDDGSSDLDPIEHSSESDNSVLEIPDAFDRTENMLSMQKNEK 683
Score = 38 (18.4 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 9/32 (28%), Positives = 12/32 (37%)
Query: 42 NSPITSRTSSPQGSETSRRSTAKKGTKRKSNP 73
NSP+ G T GT+ +NP
Sbjct: 947 NSPVGVSKVLVSGGSTHNSEKKGDGTQNSANP 978
Score = 37 (18.1 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 10/24 (41%), Positives = 11/24 (45%)
Query: 6 KRRGRPPKTPNTERPKFQVHLLKK 29
K G P TP E P+ V KK
Sbjct: 1249 KEPGIPSLTPQAELPEPAVRSEKK 1272
>MGI|MGI:1276574 [details] [associations]
symbol:Whsc1 "Wolf-Hirschhorn syndrome candidate 1 (human)"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0003149 "membranous septum morphogenesis" evidence=IMP]
[GO:0003289 "atrial septum primum morphogenesis" evidence=IMP]
[GO:0003290 "atrial septum secundum morphogenesis" evidence=IMP]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005694 "chromosome" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IDA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0018022 "peptidyl-lysine methylation" evidence=IDA] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IDA]
[GO:0032259 "methylation" evidence=IEA] [GO:0034968 "histone lysine
methylation" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0060348 "bone development" evidence=IMP]
InterPro:IPR001841 Pfam:PF00856 InterPro:IPR009071
InterPro:IPR001214 InterPro:IPR001965 InterPro:IPR006560
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50280
PROSITE:PS51215 SMART:SM00184 SMART:SM00249 SMART:SM00317
SMART:SM00570 MGI:MGI:1276574 Pfam:PF00855 Pfam:PF00505
GO:GO:0005634 GO:GO:0005694 GO:GO:0005730 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0031965 GO:GO:0006351
GO:GO:0003682 GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0003289 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0060348 eggNOG:COG2940
GO:GO:0018024 InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
GeneTree:ENSGT00700000104009 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 GO:GO:0003149 GO:GO:0003290 KO:K11424
UniGene:Mm.332320 HSSP:Q9BYU8 CTD:7468 OMA:DVKRCVV ChiTaRS:WHSC1
EMBL:EU733655 EMBL:AK129287 EMBL:AC163329 EMBL:AK078622
EMBL:BC046473 EMBL:BC053454 IPI:IPI00107975 IPI:IPI00671804
IPI:IPI00762411 IPI:IPI00902751 RefSeq:NP_001074571.2
RefSeq:NP_780440.2 UniGene:Mm.19892 UniGene:Mm.490310
ProteinModelPortal:Q8BVE8 SMR:Q8BVE8 STRING:Q8BVE8
PhosphoSite:Q8BVE8 PaxDb:Q8BVE8 PRIDE:Q8BVE8
Ensembl:ENSMUST00000058096 Ensembl:ENSMUST00000066854
Ensembl:ENSMUST00000075812 GeneID:107823 KEGG:mmu:107823
UCSC:uc008xbm.2 UCSC:uc012duw.1 HOGENOM:HOG000230893
HOVERGEN:HBG079979 NextBio:359529 Bgee:Q8BVE8 CleanEx:MM_WHSC1
Genevestigator:Q8BVE8 GermOnline:ENSMUSG00000057406 Uniprot:Q8BVE8
Length = 1365
Score = 127 (49.8 bits), Expect = 0.00019, P = 0.00019
Identities = 22/46 (47%), Positives = 29/46 (63%)
Query: 336 CRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHK 381
C VC + G LLCCE CPA FH +C++ ++P W CN C+A K
Sbjct: 834 CFVCSKGGSLLCCEACPAAFHPDCLNI---EMPDGSWFCNDCRAGK 876
>UNIPROTKB|F1S3C1 [details] [associations]
symbol:NSD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050681 "androgen receptor binding" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003712 "transcription cofactor activity" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0001702
"gastrulation with mouth forming second" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] InterPro:IPR001841
Pfam:PF00856 InterPro:IPR001214 InterPro:IPR001965
InterPro:IPR006560 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184 SMART:SM00249
SMART:SM00317 SMART:SM00570 Pfam:PF00855 GO:GO:0005634
GO:GO:0045893 GO:GO:0046872 GO:GO:0008270 GO:GO:0003682
GO:GO:0001702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0003712 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GeneTree:ENSGT00700000104009
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 OMA:NIDKMRH
EMBL:CU915382 Ensembl:ENSSSCT00000015341 Uniprot:F1S3C1
Length = 2394
Score = 141 (54.7 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 24/46 (52%), Positives = 31/46 (67%)
Query: 336 CRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHK 381
C VC G LLCC++CPA FH EC++ D+P+ +W CN CKA K
Sbjct: 1407 CFVCSEGGSLLCCDSCPAAFHRECLNI---DIPEGNWYCNDCKAGK 1449
Score = 37 (18.1 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 13/51 (25%), Positives = 19/51 (37%)
Query: 39 RGLNSPITSRTSSPQGSETSRRSTAKKGTKRKSNP-PTXXXXXXNQKRKQT 88
R S + S+ G T R K KRK N P Q+ +++
Sbjct: 714 RSKPSKLRDGFSAQVGRNTVNRKALKTERKRKLNRLPAVTLEAALQRERES 764
>UNIPROTKB|J9P6F3 [details] [associations]
symbol:WHSC1L1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0018024 "histone-lysine N-methyltransferase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF00856 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR006560 InterPro:IPR019787
PROSITE:PS50016 PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184
SMART:SM00249 SMART:SM00317 SMART:SM00570 Pfam:PF00855
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968
InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
GeneTree:ENSGT00700000104009 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 EMBL:AAEX03010393 Ensembl:ENSCAFT00000048373
Uniprot:J9P6F3
Length = 850
Score = 124 (48.7 bits), Expect = 0.00023, P = 0.00023
Identities = 22/43 (51%), Positives = 28/43 (65%)
Query: 339 CHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHK 381
C + G LLCCE+CPA FH EC+ ++P+ W CN CKA K
Sbjct: 330 CEKGGRLLCCESCPASFHPECLSI---EMPEGCWNCNDCKAGK 369
>ZFIN|ZDB-GENE-030131-624 [details] [associations]
symbol:phrf1 "PHD and ring finger domains 1"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016 PROSITE:PS50089
SMART:SM00184 SMART:SM00249 Prosite:PS00518
ZFIN:ZDB-GENE-030131-624 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR017907 GeneTree:ENSGT00530000063661 EMBL:AL928892
Ensembl:ENSDART00000150719 Bgee:H0WEE0 Uniprot:H0WEE0
Length = 1670
Score = 127 (49.8 bits), Expect = 0.00024, P = 0.00024
Identities = 25/65 (38%), Positives = 36/65 (55%)
Query: 336 CRVC---HRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHKVTGVTDCLPDV 392
C +C R LL C+ C A +H+EC+ PPL VP E+W C C A+ T ++ + +
Sbjct: 185 CEICGGRDREDRLLLCDGCDAGYHMECLTPPLDAVPVEEWFCPECIANNRTSGSEQISEE 244
Query: 393 EKSGL 397
E S L
Sbjct: 245 ESSSL 249
>SGD|S000003880 [details] [associations]
symbol:JHD2 "JmjC domain family histone demethylase specific
for H3-K4" species:4932 "Saccharomyces cerevisiae" [GO:0032453
"histone demethylase activity (H3-K4 specific)" evidence=IDA;IMP]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0016577 "histone demethylation" evidence=IDA;IMP] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR019787 Pfam:PF00628 Pfam:PF02373 PROSITE:PS50016
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 SGD:S000003880
GO:GO:0005634 GO:GO:0005737 EMBL:BK006943 GO:GO:0046872
GO:GO:0008270 GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 eggNOG:NOG327026 GeneTree:ENSGT00530000063118
EMBL:Z49619 EMBL:Z49620 PIR:S57142 RefSeq:NP_012653.1
ProteinModelPortal:P47156 SMR:P47156 DIP:DIP-4835N IntAct:P47156
MINT:MINT-537060 STRING:P47156 PaxDb:P47156 EnsemblFungi:YJR119C
GeneID:853583 KEGG:sce:YJR119C CYGD:YJR119c HOGENOM:HOG000113131
OMA:RNISGMT OrthoDB:EOG44N21B NextBio:974376 Genevestigator:P47156
GermOnline:YJR119C GO:GO:0032453 Uniprot:P47156
Length = 728
Score = 123 (48.4 bits), Expect = 0.00025, P = 0.00025
Identities = 20/48 (41%), Positives = 27/48 (56%)
Query: 333 DDHCRVCHRVGE---LLCCETCPAVFHLECVDPPLRDVPQEDWQCNLC 377
DD C VC + + + C++C FH+ C+ PPL VP DW CN C
Sbjct: 235 DDACIVCRKTNDPKRTILCDSCDKPFHIYCLSPPLERVPSGDWICNTC 282
>TAIR|locus:2178828 [details] [associations]
symbol:AT5G58610 "AT5G58610" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0010200 "response to chitin" evidence=IEP] [GO:0042991
"transcription factor import into nucleus" evidence=RCA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 INTERPRO:IPR008395 EMBL:CP002688 GO:GO:0046872
GO:GO:0008270 Gene3D:3.40.630.30 InterPro:IPR016181 SUPFAM:SSF55729
GO:GO:0010200 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 Pfam:PF05641 InterPro:IPR014002
SMART:SM00743 IPI:IPI00519073 RefSeq:NP_200669.1 UniGene:At.55614
ProteinModelPortal:F4KGA3 SMR:F4KGA3 EnsemblPlants:AT5G58610.1
GeneID:835975 KEGG:ath:AT5G58610 OMA:RITQDWN Uniprot:F4KGA3
Length = 1065
Score = 124 (48.7 bits), Expect = 0.00031, P = 0.00031
Identities = 21/45 (46%), Positives = 26/45 (57%)
Query: 333 DDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLC 377
D C VCH G+L+ C+ CP+ FH C+ L DVP DW C C
Sbjct: 694 DVFCSVCHYGGKLILCDGCPSAFHANCLG--LEDVPDGDWFCQSC 736
>RGD|708360 [details] [associations]
symbol:Phrf1 "PHD and ring finger domains 1" species:10116
"Rattus norvegicus" [GO:0006366 "transcription from RNA polymerase
II promoter" evidence=IMP] [GO:0006397 "mRNA processing"
evidence=IMP] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=IMP]
[GO:0070063 "RNA polymerase binding" evidence=IPI]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016 PROSITE:PS50089
SMART:SM00184 SMART:SM00249 RGD:708360 Prosite:PS00518
GO:GO:0019904 GO:GO:0046872 GO:GO:0008270 GO:GO:0006397
GO:GO:0006366 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR017907 EMBL:AC118351 CTD:57661
eggNOG:NOG300312 HOVERGEN:HBG108250 OMA:YMKKLHM OrthoDB:EOG4MSD0F
GeneTree:ENSGT00530000063661 HOGENOM:HOG000082501 EMBL:U49057
IPI:IPI00211009 IPI:IPI00915115 PIR:T31422 RefSeq:NP_620793.1
UniGene:Rn.10530 ProteinModelPortal:Q63625 STRING:Q63625
PRIDE:Q63625 Ensembl:ENSRNOT00000023376 Ensembl:ENSRNOT00000051755
GeneID:245925 KEGG:rno:245925 UCSC:RGD:708360 InParanoid:Q63625
NextBio:623186 ArrayExpress:Q63625 Genevestigator:Q63625
Uniprot:Q63625
Length = 1685
Score = 134 (52.2 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 29/68 (42%), Positives = 37/68 (54%)
Query: 336 CRVC---HRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHKVTGVTDCLP-- 390
C VC R LL C+ C A +H+EC+DPPL++VP ++W C C V D P
Sbjct: 191 CEVCGRSDREDRLLLCDGCDAGYHMECLDPPLQEVPVDEWFCPECAVPGVDPTHDAAPVS 250
Query: 391 DVEKSGLL 398
D E S LL
Sbjct: 251 DEEVSLLL 258
Score = 39 (18.8 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 6/18 (33%), Positives = 12/18 (66%)
Query: 160 LQTERQIQPLELPRSSDD 177
++T+R+++ P S DD
Sbjct: 88 VETQRKLEASSTPNSDDD 105
>UNIPROTKB|Q63625 [details] [associations]
symbol:Phrf1 "PHD and RING finger domain-containing protein
1" species:10116 "Rattus norvegicus" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016
PROSITE:PS50089 SMART:SM00184 SMART:SM00249 RGD:708360
Prosite:PS00518 GO:GO:0019904 GO:GO:0046872 GO:GO:0008270
GO:GO:0006397 GO:GO:0006366 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR017907 EMBL:AC118351 CTD:57661
eggNOG:NOG300312 HOVERGEN:HBG108250 OMA:YMKKLHM OrthoDB:EOG4MSD0F
GeneTree:ENSGT00530000063661 HOGENOM:HOG000082501 EMBL:U49057
IPI:IPI00211009 IPI:IPI00915115 PIR:T31422 RefSeq:NP_620793.1
UniGene:Rn.10530 ProteinModelPortal:Q63625 STRING:Q63625
PRIDE:Q63625 Ensembl:ENSRNOT00000023376 Ensembl:ENSRNOT00000051755
GeneID:245925 KEGG:rno:245925 UCSC:RGD:708360 InParanoid:Q63625
NextBio:623186 ArrayExpress:Q63625 Genevestigator:Q63625
Uniprot:Q63625
Length = 1685
Score = 134 (52.2 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 29/68 (42%), Positives = 37/68 (54%)
Query: 336 CRVC---HRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHKVTGVTDCLP-- 390
C VC R LL C+ C A +H+EC+DPPL++VP ++W C C V D P
Sbjct: 191 CEVCGRSDREDRLLLCDGCDAGYHMECLDPPLQEVPVDEWFCPECAVPGVDPTHDAAPVS 250
Query: 391 DVEKSGLL 398
D E S LL
Sbjct: 251 DEEVSLLL 258
Score = 39 (18.8 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 6/18 (33%), Positives = 12/18 (66%)
Query: 160 LQTERQIQPLELPRSSDD 177
++T+R+++ P S DD
Sbjct: 88 VETQRKLEASSTPNSDDD 105
>UNIPROTKB|H7C212 [details] [associations]
symbol:MLL3 "Histone-lysine N-methyltransferase MLL3"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628
PROSITE:PS50016 SMART:SM00249 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 EMBL:AC005631 EMBL:AC006017 EMBL:AC104692
HGNC:HGNC:13726 ChiTaRS:MLL3 EMBL:AC006474
ProteinModelPortal:H7C212 Ensembl:ENST00000418673 Uniprot:H7C212
Length = 228
Score = 113 (44.8 bits), Expect = 0.00040, P = 0.00040
Identities = 20/54 (37%), Positives = 28/54 (51%)
Query: 336 CRVCHRV---GELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHKVTGVT 386
C C + G LL C+ C +H C+DPPL+ VP+ W+C C + G T
Sbjct: 166 CEACGKATDPGRLLLCDDCDISYHTYCLDPPLQTVPKGGWKCKWCVWCRHCGAT 219
>TAIR|locus:2147391 [details] [associations]
symbol:AT5G36740 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR017956
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00249
SMART:SM00384 EMBL:CP002688 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 InterPro:IPR020478 PRINTS:PR00929 Gene3D:3.40.630.30
InterPro:IPR016181 SUPFAM:SSF55729 GO:GO:0016746 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 UniGene:At.55161 IPI:IPI00544011
RefSeq:NP_568540.1 UniGene:At.55166 ProteinModelPortal:F4K4H9
SMR:F4K4H9 EnsemblPlants:AT5G36740.1 GeneID:833643
KEGG:ath:AT5G36740 OMA:IDTWTSG Uniprot:F4K4H9
Length = 1179
Score = 116 (45.9 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 18/45 (40%), Positives = 26/45 (57%)
Query: 333 DDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLC 377
DD C +C G+L+CC+ CP+ FH C+D ++ P W C C
Sbjct: 650 DDTCGICGDGGDLICCDGCPSTFHQSCLD--IKKFPSGAWYCYNC 692
Score = 54 (24.1 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 19/66 (28%), Positives = 25/66 (37%)
Query: 8 RGRPPKTPNTERPKFQVHLLKKPQYLQNLEARGLNSPITSRTSSPQGSETSRRSTAKKGT 67
RGRPPKT T +++ K P+ R P T + G AKK
Sbjct: 292 RGRPPKTKETS---VSLYIEKGPESNGRRMVRKRGRPPTPQKKRKSGMTDESDWKAKKRL 348
Query: 68 KRKSNP 73
K +P
Sbjct: 349 KLCESP 354
>TAIR|locus:2832118 [details] [associations]
symbol:AT5G36670 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR017956
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00249
SMART:SM00384 EMBL:CP002688 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 InterPro:IPR020478 PRINTS:PR00929 Gene3D:3.40.630.30
InterPro:IPR016181 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 IPI:IPI00527539 RefSeq:NP_568537.1 UniGene:At.55161
ProteinModelPortal:F4K4G6 SMR:F4K4G6 EnsemblPlants:AT5G36670.1
GeneID:833632 KEGG:ath:AT5G36670 ArrayExpress:F4K4G6 Uniprot:F4K4G6
Length = 1193
Score = 116 (45.9 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 18/45 (40%), Positives = 26/45 (57%)
Query: 333 DDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLC 377
DD C +C G+L+CC+ CP+ FH C+D ++ P W C C
Sbjct: 650 DDTCGICGDGGDLICCDGCPSTFHQSCLD--IKKFPSGAWYCYNC 692
Score = 54 (24.1 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 19/66 (28%), Positives = 25/66 (37%)
Query: 8 RGRPPKTPNTERPKFQVHLLKKPQYLQNLEARGLNSPITSRTSSPQGSETSRRSTAKKGT 67
RGRPPKT T +++ K P+ R P T + G AKK
Sbjct: 292 RGRPPKTKETS---VSLYIEKGPESNGRRMVRKRGRPPTPQKKRKSGMTDESDWKAKKRL 348
Query: 68 KRKSNP 73
K +P
Sbjct: 349 KLCESP 354
>UNIPROTKB|I3L9M6 [details] [associations]
symbol:BAZ2A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001739 InterPro:IPR001965
InterPro:IPR016177 InterPro:IPR017956 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF01429 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50982 SMART:SM00249
SMART:SM00297 SMART:SM00384 SMART:SM00391 GO:GO:0005634
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 SUPFAM:SSF54171
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR004022 InterPro:IPR018500
InterPro:IPR018501 Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
GeneTree:ENSGT00660000095335 Gene3D:3.30.890.10 EMBL:CU468457
Ensembl:ENSSSCT00000032195 Uniprot:I3L9M6
Length = 1750
Score = 106 (42.4 bits), Expect = 0.00045, Sum P(3) = 0.00045
Identities = 30/89 (33%), Positives = 41/89 (46%)
Query: 336 CRVCHRVGE----LLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHKVTGVTDCLPD 391
C VC R G+ LL C+ C H+ C P + VP+ DW C +C + +V G P
Sbjct: 1525 CLVC-RKGDNDEFLLLCDGCDRGCHIYCHRPKMEAVPEGDWFCAVCLSQQVEGELTQKPG 1583
Query: 392 VEKSGLLCRQEH-LGFDRA-GRKYWFLSR 418
K G + + L F GR+ LSR
Sbjct: 1584 FPKRGQKRKSSYMLTFPEGDGRRRRLLSR 1612
Score = 70 (29.7 bits), Expect = 0.00045, Sum P(3) = 0.00045
Identities = 26/74 (35%), Positives = 37/74 (50%)
Query: 4 RIKR-RGRPPKTPNTER-PKFQVHLLKK--PQYLQNLEARGLNSPITSRTSSPQGSETSR 59
++KR RGRPPK TE K + LLKK Q N E + S I + ++ +
Sbjct: 560 KVKRGRGRPPKVKITEMLNKTENRLLKKLEAQETLNEEDKAKMSKIKKKIKQKARNKRKQ 619
Query: 60 --RSTAKKGTKRKS 71
+S +K TK+KS
Sbjct: 620 ETKSLKQKETKKKS 633
Score = 41 (19.5 bits), Expect = 0.00045, Sum P(3) = 0.00045
Identities = 10/22 (45%), Positives = 12/22 (54%)
Query: 160 LQTERQIQPLELPRSSDDLLIP 181
LQ + Q QPL P S + L P
Sbjct: 1073 LQPQPQPQPLSHPHSHNGFLEP 1094
>UNIPROTKB|E1C765 [details] [associations]
symbol:WHSC1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0003149 "membranous septum
morphogenesis" evidence=IEA] [GO:0003289 "atrial septum primum
morphogenesis" evidence=IEA] [GO:0003290 "atrial septum secundum
morphogenesis" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IEA]
[GO:0031965 "nuclear membrane" evidence=IEA] [GO:0060348 "bone
development" evidence=IEA] InterPro:IPR001841 Pfam:PF00856
InterPro:IPR009071 InterPro:IPR001214 InterPro:IPR001965
InterPro:IPR006560 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184
SMART:SM00249 SMART:SM00317 SMART:SM00570 Pfam:PF00855 Pfam:PF00505
GO:GO:0005730 GO:GO:0046872 GO:GO:0008270 GO:GO:0031965
GO:GO:0003682 GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0018024 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GeneTree:ENSGT00700000104009
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 OMA:DVKRCVV
EMBL:AADN02014946 IPI:IPI00588925 Ensembl:ENSGALT00000025327
Uniprot:E1C765
Length = 1372
Score = 122 (48.0 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 22/47 (46%), Positives = 30/47 (63%)
Query: 336 CRVCHRVG-ELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHK 381
C VC + G LLCCE+CPA FH +C++ ++P W CN C+A K
Sbjct: 839 CFVCSKEGGSLLCCESCPAAFHPDCLNI---EMPDGSWYCNDCRAGK 882
Score = 48 (22.0 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 19/73 (26%), Positives = 36/73 (49%)
Query: 1 MYGRIKRRGRPPKTPNTERPKFQVHLLKKPQY-LQNLEARGLNSPITSRTSSPQGSETSR 59
++G + + + K P TE + Q K+ + QN R ++ T++T+S + +ETS
Sbjct: 526 LHGNKRNQKKRTKEP-TEDFEVQEAPRKRLRMDKQNNRKRETSNDKTAKTNSTKVTETSS 584
Query: 60 RSTAKKGTKRKSN 72
+ TK S+
Sbjct: 585 SQKNQSATKNLSD 597
>TAIR|locus:2086395 [details] [associations]
symbol:ROS4 "AT3G14980" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0007267 "cell-cell signaling"
evidence=RCA] [GO:0009616 "virus induced gene silencing"
evidence=RCA] [GO:0010267 "production of ta-siRNAs involved in RNA
interference" evidence=RCA] [GO:0035196 "production of miRNAs
involved in gene silencing by miRNA" evidence=RCA] [GO:0004402
"histone acetyltransferase activity" evidence=IDA] [GO:0010385
"double-stranded methylated DNA binding" evidence=IPI] [GO:0042393
"histone binding" evidence=IDA] [GO:0043971 "histone H3-K18
acetylation" evidence=IDA] [GO:0043972 "histone H3-K23 acetylation"
evidence=IDA] [GO:0044030 "regulation of DNA methylation"
evidence=IMP] [GO:0044154 "histone H3-K14 acetylation"
evidence=IDA] [GO:0080188 "RNA-directed DNA methylation"
evidence=IMP] InterPro:IPR001841 InterPro:IPR000182
InterPro:IPR001739 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 PROSITE:PS51186 SMART:SM00184
SMART:SM00249 GO:GO:0009506 GO:GO:0005634 EMBL:CP002686
GO:GO:0046872 GO:GO:0008270 Gene3D:3.40.630.30 InterPro:IPR016181
SUPFAM:SSF55729 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0042393 Gene3D:3.30.890.10
GO:GO:0044030 GO:GO:0044154 GO:GO:0004402 GO:GO:0010385
GO:GO:0043971 UniGene:At.53322 UniGene:At.73310 IPI:IPI00540986
RefSeq:NP_188116.1 ProteinModelPortal:F4IXE7 SMR:F4IXE7
PRIDE:F4IXE7 EnsemblPlants:AT3G14980.1 GeneID:820727
KEGG:ath:AT3G14980 OMA:AECNSKL GO:GO:0043972 GO:GO:0080188
Uniprot:F4IXE7
Length = 1189
Score = 123 (48.4 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 19/45 (42%), Positives = 28/45 (62%)
Query: 333 DDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLC 377
DD C VC GEL+CC+ CP+ FH C+ ++ +P+ W C+ C
Sbjct: 726 DDSCGVCGDGGELICCDNCPSTFHQACLS--MQVLPEGSWYCSSC 768
Score = 45 (20.9 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 13/30 (43%), Positives = 16/30 (53%)
Query: 42 NSPITSRTSSPQGSETSR-RSTAKKGTKRK 70
NS +TS + PQG E S R + TK K
Sbjct: 64 NSVVTSGYACPQGFEASASRDGSDFNTKAK 93
>ZFIN|ZDB-GENE-030131-5695 [details] [associations]
symbol:trim33l "tripartite motif-containing
33-like" species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 Pfam:PF00643 PROSITE:PS50016 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00249 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-030131-5695 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR017907 GeneTree:ENSGT00530000062982
EMBL:CR388365 IPI:IPI00618952 Ensembl:ENSDART00000122433
Bgee:E7FDQ1 Uniprot:E7FDQ1
Length = 1293
Score = 122 (48.0 bits), Expect = 0.00064, P = 0.00064
Identities = 23/62 (37%), Positives = 33/62 (53%)
Query: 336 CRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHKVTGVTDCLPDVEKS 395
C VC G L C C + FH +C PP+ P+EDW C LC+ T + D +++ +
Sbjct: 1072 CVVCQSAGASLLCAKCGSAFHSDCHIPPIFTKPREDWVCLLCQDVSETLMIDSGEEMKTT 1131
Query: 396 GL 397
GL
Sbjct: 1132 GL 1133
>UNIPROTKB|O96028 [details] [associations]
symbol:WHSC1 "Histone-lysine N-methyltransferase NSD2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0003149 "membranous
septum morphogenesis" evidence=IEA] [GO:0003289 "atrial septum
primum morphogenesis" evidence=IEA] [GO:0003290 "atrial septum
secundum morphogenesis" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0060348 "bone development" evidence=IEA]
[GO:0005694 "chromosome" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0009653 "anatomical structure morphogenesis"
evidence=TAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0031965 "nuclear membrane"
evidence=IDA] InterPro:IPR001841 Pfam:PF00856 InterPro:IPR009071
InterPro:IPR001214 InterPro:IPR001965 InterPro:IPR006560
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50280
PROSITE:PS51215 SMART:SM00184 SMART:SM00249 SMART:SM00317
SMART:SM00570 Pfam:PF00855 Pfam:PF00505 GO:GO:0005737 GO:GO:0005694
GO:GO:0005730 EMBL:CH471131 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0031965 GO:GO:0006351 GO:GO:0003682
GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0003289 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0009653 GO:GO:0060348 eggNOG:COG2940
GO:GO:0018024 InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 EMBL:AL132868
GO:GO:0003149 GO:GO:0003290 Orphanet:280 KO:K11424 EMBL:AF071593
EMBL:AF071594 EMBL:AF083386 EMBL:AF083387 EMBL:AF083388
EMBL:AF083389 EMBL:AF083390 EMBL:AF083391 EMBL:AF178206
EMBL:AF178199 EMBL:AF178198 EMBL:AF178202 EMBL:AF178204
EMBL:AF178205 EMBL:AF178203 EMBL:AF178201 EMBL:AF178200
EMBL:AF178219 EMBL:AF178207 EMBL:AF178216 EMBL:AF178215
EMBL:AF178214 EMBL:AF178213 EMBL:AF178212 EMBL:AF178211
EMBL:AF178210 EMBL:AF178209 EMBL:AF178208 EMBL:AF178218
EMBL:AF178217 EMBL:AF330040 EMBL:AY694128 EMBL:AJ007042
EMBL:AB029013 EMBL:AK289697 EMBL:AC105448 EMBL:BC052254
EMBL:BC070176 EMBL:BC094825 EMBL:BC141815 EMBL:BC152412
IPI:IPI00107486 IPI:IPI00107487 IPI:IPI00218240 IPI:IPI00334604
IPI:IPI00470433 IPI:IPI00790144 IPI:IPI00792674
RefSeq:NP_001035889.1 RefSeq:NP_015627.1 RefSeq:NP_579877.1
RefSeq:NP_579878.1 RefSeq:NP_579889.1 RefSeq:NP_579890.1
UniGene:Hs.113876 HSSP:Q9BYU8 ProteinModelPortal:O96028 SMR:O96028
IntAct:O96028 MINT:MINT-7103764 STRING:O96028 PhosphoSite:O96028
PaxDb:O96028 PRIDE:O96028 DNASU:7468 Ensembl:ENST00000312087
Ensembl:ENST00000353275 Ensembl:ENST00000382888
Ensembl:ENST00000382891 Ensembl:ENST00000382892
Ensembl:ENST00000382895 Ensembl:ENST00000398261
Ensembl:ENST00000420906 Ensembl:ENST00000436793
Ensembl:ENST00000503128 Ensembl:ENST00000508803
Ensembl:ENST00000512700 Ensembl:ENST00000514045 GeneID:7468
KEGG:hsa:7468 UCSC:uc003gdx.3 UCSC:uc003gdy.1 UCSC:uc003gdz.4
UCSC:uc003geg.1 UCSC:uc003geh.1 UCSC:uc003gei.4 CTD:7468
GeneCards:GC04P001840 HGNC:HGNC:12766 HPA:HPA015315 HPA:HPA015801
MIM:602952 neXtProt:NX_O96028 PharmGKB:PA37369 HOVERGEN:HBG053345
InParanoid:O96028 OMA:DVKRCVV ChiTaRS:WHSC1 GenomeRNAi:7468
NextBio:29246 ArrayExpress:O96028 Bgee:O96028 Genevestigator:O96028
GermOnline:ENSG00000109685 Uniprot:O96028
Length = 1365
Score = 128 (50.1 bits), Expect = 0.00077, Sum P(2) = 0.00077
Identities = 22/46 (47%), Positives = 30/46 (65%)
Query: 336 CRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHK 381
C VC + G LLCCE+CPA FH +C++ ++P W CN C+A K
Sbjct: 834 CFVCSKGGSLLCCESCPAAFHPDCLNI---EMPDGSWFCNDCRAGK 876
Score = 40 (19.1 bits), Expect = 0.00077, Sum P(2) = 0.00077
Identities = 12/46 (26%), Positives = 21/46 (45%)
Query: 29 KPQYLQNLEARGLNSPIT-SRTSSPQGSETSRRSTAKKGTKRKSNP 73
KP +N + +S + S++SSP S T + G + +P
Sbjct: 595 KPLKKRNRASTAASSALGFSKSSSPSASLTENEVSDSPGDEPSESP 640
>UNIPROTKB|E2QZB0 [details] [associations]
symbol:SP140 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000770 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR004865 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF01342 Pfam:PF03172 PROSITE:PS50014
PROSITE:PS50016 PROSITE:PS50864 PROSITE:PS51414 SMART:SM00249
SMART:SM00258 SMART:SM00297 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:3.10.390.10 InterPro:IPR010919
SUPFAM:SSF63763 Gene3D:1.20.920.10 SUPFAM:SSF47370
Ensembl:ENSCAFT00000017034 Uniprot:E2QZB0
Length = 728
Score = 123 (48.4 bits), Expect = 0.00078, Sum P(2) = 0.00078
Identities = 23/69 (33%), Positives = 31/69 (44%)
Query: 321 REDLIH-EGGFQYDDHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKA 379
RE + H D C C GEL CC+TC FH +C PP+ + + W C C+
Sbjct: 539 REKITHFMSNLGNSDECETCRDGGELFCCDTCSRSFHEDCHIPPV-ETERSPWSCTFCRI 597
Query: 380 HKVTGVTDC 388
+ G C
Sbjct: 598 ESL-GRQQC 605
Score = 39 (18.8 bits), Expect = 0.00078, Sum P(2) = 0.00078
Identities = 8/14 (57%), Positives = 11/14 (78%)
Query: 277 ESDKTFDEEVLNIL 290
E +KTFD+ VL+ L
Sbjct: 81 ELEKTFDKTVLDAL 94
>UNIPROTKB|I3LTW3 [details] [associations]
symbol:I3LTW3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 SMART:SM00249
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GeneTree:ENSGT00390000008296
EMBL:AEMK01185240 EMBL:CU928954 Ensembl:ENSSSCT00000025343
Uniprot:I3LTW3
Length = 113
Score = 93 (37.8 bits), Expect = 0.00079, P = 0.00079
Identities = 14/32 (43%), Positives = 21/32 (65%)
Query: 348 CETCPAVFHLECVDPPLRDVPQED-WQCNLCK 378
C+ C +H+ C++PPL VP+E+ W C CK
Sbjct: 5 CDECNMAYHIYCLNPPLDKVPEEEYWYCPSCK 36
>UNIPROTKB|F6XUE7 [details] [associations]
symbol:SP140 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000770 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR004865 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF01342 Pfam:PF03172 PROSITE:PS50014
PROSITE:PS50016 PROSITE:PS50864 PROSITE:PS51414 SMART:SM00249
SMART:SM00258 SMART:SM00297 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:3.10.390.10 InterPro:IPR010919
SUPFAM:SSF63763 Gene3D:1.20.920.10 SUPFAM:SSF47370 OMA:MCFSEEV
GeneTree:ENSGT00510000046835 Ensembl:ENSCAFT00000017034
EMBL:AAEX03014424 Uniprot:F6XUE7
Length = 551
Score = 120 (47.3 bits), Expect = 0.00081, Sum P(2) = 0.00081
Identities = 20/55 (36%), Positives = 27/55 (49%)
Query: 334 DHCRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHKVTGVTDC 388
D C C GEL CC+TC FH +C PP+ + + W C C+ + G C
Sbjct: 376 DECETCRDGGELFCCDTCSRSFHEDCHIPPV-ETERSPWSCTFCRIESL-GRQQC 428
Score = 39 (18.8 bits), Expect = 0.00081, Sum P(2) = 0.00081
Identities = 8/14 (57%), Positives = 11/14 (78%)
Query: 277 ESDKTFDEEVLNIL 290
E +KTFD+ VL+ L
Sbjct: 81 ELEKTFDKTVLDAL 94
>UNIPROTKB|F1MMY4 [details] [associations]
symbol:WHSC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060348 "bone development" evidence=IEA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003290 "atrial septum secundum morphogenesis" evidence=IEA]
[GO:0003289 "atrial septum primum morphogenesis" evidence=IEA]
[GO:0003149 "membranous septum morphogenesis" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 Pfam:PF00856
InterPro:IPR009071 InterPro:IPR001214 InterPro:IPR001965
InterPro:IPR006560 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184
SMART:SM00249 SMART:SM00317 SMART:SM00570 Pfam:PF00855 Pfam:PF00505
GO:GO:0005730 GO:GO:0046872 GO:GO:0008270 GO:GO:0031965
GO:GO:0003682 GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0003289 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0060348 GO:GO:0018024
InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
GeneTree:ENSGT00700000104009 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 GO:GO:0003149 GO:GO:0003290 OMA:DVKRCVV
EMBL:DAAA02018575 IPI:IPI00714897 Ensembl:ENSBTAT00000010497
Uniprot:F1MMY4
Length = 1368
Score = 127 (49.8 bits), Expect = 0.00098, Sum P(2) = 0.00098
Identities = 22/46 (47%), Positives = 29/46 (63%)
Query: 336 CRVCHRVGELLCCETCPAVFHLECVDPPLRDVPQEDWQCNLCKAHK 381
C VC + G LLCCE+CPA FH +C+ ++P W CN C+A K
Sbjct: 837 CFVCSKGGSLLCCESCPAAFHPDCLSI---EMPDGSWFCNDCRAGK 879
Score = 40 (19.1 bits), Expect = 0.00098, Sum P(2) = 0.00098
Identities = 11/43 (25%), Positives = 15/43 (34%)
Query: 52 PQGSETSRRSTAKKGTKRKSNPPTXXXXXXNQKRKQTLETDYH 94
PQ E S KK + K + ++ L TD H
Sbjct: 515 PQSEEDSGNLNGKKRSHTKRTQGLRGDAEVEEAPRKRLRTDRH 557
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.136 0.416 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 422 382 0.00091 117 3 11 22 0.39 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 227
No. of states in DFA: 615 (65 KB)
Total size of DFA: 272 KB (2144 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:02
No. of threads or processors used: 24
Search cpu time: 33.11u 0.09s 33.20t Elapsed: 00:00:18
Total cpu time: 33.14u 0.09s 33.23t Elapsed: 00:00:20
Start: Thu Aug 15 12:12:24 2013 End: Thu Aug 15 12:12:44 2013
WARNINGS ISSUED: 1