BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5121
(204 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8C8R3|ANK2_MOUSE Ankyrin-2 OS=Mus musculus GN=Ank2 PE=1 SV=2
Length = 3898
Score = 99.8 bits (247), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 47/74 (63%), Positives = 60/74 (81%), Gaps = 2/74 (2%)
Query: 62 ILDMPPPVEADPSRLTRILTMDFPHYFAVVSRVKQEVHAIGPEGGMVSSSVVPQVQAVFP 121
+LD P +E R+ RI+T DFP YFAVVSR+KQ+ + IGPEGG++SS+VV QVQAVFP
Sbjct: 1094 VLDSPEDLEK--KRICRIITRDFPQYFAVVSRIKQDSNLIGPEGGVLSSTVVSQVQAVFP 1151
Query: 122 QGALTKKIKVGLQV 135
+GALTK+I+VGLQ
Sbjct: 1152 EGALTKRIRVGLQA 1165
>sp|Q12955|ANK3_HUMAN Ankyrin-3 OS=Homo sapiens GN=ANK3 PE=1 SV=3
Length = 4377
Score = 99.0 bits (245), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 71/110 (64%), Gaps = 8/110 (7%)
Query: 48 QWPVNYKGILSVLTILD--MPPPVEADPSRLTRILTMDFPHYFAVVSRVKQEVHAIGPEG 105
Q+ + + +L +D + P E R+ RI+T DFP YFAVVSR+KQE + IGPEG
Sbjct: 1092 QFDSKNEDLTELLNGMDEELDSPEELGKKRICRIITKDFPQYFAVVSRIKQESNQIGPEG 1151
Query: 106 GMVSSSVVPQVQAVFPQGALTKKIKVGLQVNLFKPRKNVPPAALKKITVN 155
G++SS+ VP VQA FP+GALTK+I+VGLQ + VP +KKI N
Sbjct: 1152 GILSSTTVPLVQASFPEGALTKRIRVGLQA------QPVPDEIVKKILGN 1195
>sp|G5E8K5|ANK3_MOUSE Ankyrin-3 OS=Mus musculus GN=Ank3 PE=1 SV=1
Length = 1961
Score = 99.0 bits (245), Expect = 2e-20, Method: Composition-based stats.
Identities = 52/109 (47%), Positives = 70/109 (64%), Gaps = 15/109 (13%)
Query: 64 DMPPPVEADPSRLTRILTMDFPHYFAVVSRVKQEVHAIGPEGGMVSSSVVPQVQAVFPQG 123
++ P E R+ RI+T DFP YFAVVSR+KQE + IGPEGG++SS+ VP VQA FP+G
Sbjct: 1111 ELDSPEELGTKRICRIITKDFPQYFAVVSRIKQESNQIGPEGGILSSTTVPLVQASFPEG 1170
Query: 124 ALTKKIKVGLQVNLFKPRKNVPPAALKKITVNHI---------PKKKRF 163
ALTK+I+VGLQ + VP +KKI N P++++F
Sbjct: 1171 ALTKRIRVGLQA------QPVPEETVKKILGNKATFSPIVTVEPRRRKF 1213
>sp|Q01484|ANK2_HUMAN Ankyrin-2 OS=Homo sapiens GN=ANK2 PE=1 SV=4
Length = 3957
Score = 98.6 bits (244), Expect = 3e-20, Method: Composition-based stats.
Identities = 48/73 (65%), Positives = 61/73 (83%), Gaps = 2/73 (2%)
Query: 62 ILDMPPPVEADPSRLTRILTMDFPHYFAVVSRVKQEVHAIGPEGGMVSSSVVPQVQAVFP 121
+LD P +E R+ RI+T DFP YFAVVSR+KQ+ + IGPEGG++SS+VVPQVQAVFP
Sbjct: 1127 VLDSPEDLEK--KRICRIITRDFPQYFAVVSRIKQDSNLIGPEGGVLSSTVVPQVQAVFP 1184
Query: 122 QGALTKKIKVGLQ 134
+GALTK+I+VGLQ
Sbjct: 1185 EGALTKRIRVGLQ 1197
>sp|Q02357|ANK1_MOUSE Ankyrin-1 OS=Mus musculus GN=Ank1 PE=1 SV=2
Length = 1862
Score = 74.3 bits (181), Expect = 5e-13, Method: Composition-based stats.
Identities = 33/60 (55%), Positives = 45/60 (75%)
Query: 75 RLTRILTMDFPHYFAVVSRVKQEVHAIGPEGGMVSSSVVPQVQAVFPQGALTKKIKVGLQ 134
R+ RI+T DFP YF ++SR+ Q+ IGPEGG + S +VP VQA FP+ A+TKK+K+ LQ
Sbjct: 1046 RVCRIITTDFPLYFVIMSRLCQDYDTIGPEGGSLRSKLVPLVQATFPENAVTKKVKLALQ 1105
>sp|P16157|ANK1_HUMAN Ankyrin-1 OS=Homo sapiens GN=ANK1 PE=1 SV=3
Length = 1881
Score = 73.9 bits (180), Expect = 7e-13, Method: Composition-based stats.
Identities = 32/60 (53%), Positives = 45/60 (75%)
Query: 75 RLTRILTMDFPHYFAVVSRVKQEVHAIGPEGGMVSSSVVPQVQAVFPQGALTKKIKVGLQ 134
R+ RI+T DFP YF ++SR+ Q+ IGPEGG + S +VP VQA FP+ A+TK++K+ LQ
Sbjct: 1050 RVCRIITTDFPLYFVIMSRLCQDYDTIGPEGGSLKSKLVPLVQATFPENAVTKRVKLALQ 1109
>sp|Q9HB75|PIDD_HUMAN p53-induced protein with a death domain OS=Homo sapiens GN=PIDD
PE=1 SV=2
Length = 910
Score = 37.4 bits (85), Expect = 0.071, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 33/66 (50%)
Query: 70 EADPSRLTRILTMDFPHYFAVVSRVKQEVHAIGPEGGMVSSSVVPQVQAVFPQGALTKKI 129
E P RL + +F VVSR + PEG ++ SS P V+ +FP GA +
Sbjct: 430 EEAPQRLWAHCQVPHFSWFLVVSRPVSNACLVPPEGTLLCSSGHPGVKVIFPPGATEEPR 489
Query: 130 KVGLQV 135
+V +QV
Sbjct: 490 RVSMQV 495
>sp|A5LFX5|KCNU1_MACFA Potassium channel subfamily U member 1 OS=Macaca fascicularis
GN=KCNU1 PE=2 SV=1
Length = 1149
Score = 36.2 bits (82), Expect = 0.17, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 35/84 (41%), Gaps = 22/84 (26%)
Query: 3 PPLITSTWARHLPALGVSRNMVDRPSIEQVKLCYPGSVNVSVDIDQWPVNYKGILSVLTI 62
P LIT+ + SR V P+++ VK C KG+ S +
Sbjct: 613 PELITNCGCK-----SRSRQHVTVPAVKIVKKCM-----------------KGLSSHMAG 650
Query: 63 LDMPPPVEADPSRLTRILTMDFPH 86
D PP V A PSR++ T FPH
Sbjct: 651 QDSPPRVHASPSRISDFTTRTFPH 674
>sp|Q4VZL0|YCF1_CUCSA Putative membrane protein ycf1 OS=Cucumis sativus GN=ycf1-A PE=3
SV=2
Length = 1879
Score = 33.5 bits (75), Expect = 1.0, Method: Composition-based stats.
Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 16/100 (16%)
Query: 74 SRLTRILTMDFPHYFAVVSRVKQEVHAIGPEGGMVSSSVVPQVQAVFPQGALTKKIKVGL 133
+ LTRIL + PH+F K+E++ + + +P + FPQ LT G+
Sbjct: 848 ANLTRILLLSPPHFFEDFKNWKKEIYV------KCTYNAIPLAENEFPQNWLTD----GI 897
Query: 134 QVNLFKPRKNVPPAALKKITVNHIPKKKRFSLVWVGGGAT 173
Q+ + P + KKI +KK F + V G T
Sbjct: 898 QIKILFPFRLQSWHRSKKI------EKKDFCFLTVFGTET 931
>sp|Q9ERV7|PIDD_MOUSE p53-induced protein with a death domain OS=Mus musculus GN=Pidd
PE=1 SV=1
Length = 915
Score = 32.3 bits (72), Expect = 2.1, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 30/66 (45%)
Query: 70 EADPSRLTRILTMDFPHYFAVVSRVKQEVHAIGPEGGMVSSSVVPQVQAVFPQGALTKKI 129
E P RL + +F VV R + PEG ++ SS P V+ FP G +
Sbjct: 435 EEAPKRLWARCQVPHFSWFLVVLRPVSNTCLLPPEGALLCSSGHPGVRVTFPPGVTEEPR 494
Query: 130 KVGLQV 135
+V +QV
Sbjct: 495 QVSMQV 500
>sp|B9LTS6|PSB_HALLT Proteasome subunit beta OS=Halorubrum lacusprofundi (strain ATCC
49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=psmB PE=3 SV=1
Length = 243
Score = 31.6 bits (70), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 21/38 (55%)
Query: 105 GGMVSSSVVPQVQAVFPQGALTKKIKVGLQVNLFKPRK 142
GGMVSS V +V+ V P+GALT V NL K
Sbjct: 72 GGMVSSKDVQKVEEVHPRGALTIAGSVSAAQNLISTLK 109
>sp|A4FWR5|GATD_METM5 Glutamyl-tRNA(Gln) amidotransferase subunit D OS=Methanococcus
maripaludis (strain C5 / ATCC BAA-1333) GN=gatD PE=3
SV=1
Length = 418
Score = 31.2 bits (69), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 9/90 (10%)
Query: 109 SSSVVPQVQAVFPQGALTKKIK-VGLQVNLFKPRKNVPPAALKKITVNHIPKKKRFSLVW 167
+VV ++++ + G KKIK + + + KP+ +PP L+K PK K S++
Sbjct: 26 EDTVVIKMKSGYNVGLDKKKIKNIEILESGDKPKYGLPPLNLEKN-----PKLKNISILS 80
Query: 168 VGGGATVRSGEKSGKTDPVKPGFPSSRLTR 197
GG R K+G V P F + L R
Sbjct: 81 TGGTVASRVDYKTG---AVHPAFTADDLIR 107
>sp|P61400|GATD_METMP Glutamyl-tRNA(Gln) amidotransferase subunit D OS=Methanococcus
maripaludis (strain S2 / LL) GN=gatD PE=3 SV=1
Length = 418
Score = 31.2 bits (69), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 9/90 (10%)
Query: 109 SSSVVPQVQAVFPQGALTKKIK-VGLQVNLFKPRKNVPPAALKKITVNHIPKKKRFSLVW 167
+VV ++++ + G KKIK + + + KP+ +PP L+K PK K S++
Sbjct: 26 EDTVVIKMKSGYNVGIDKKKIKNIEILESGDKPKYGLPPLNLEKN-----PKLKNISILS 80
Query: 168 VGGGATVRSGEKSGKTDPVKPGFPSSRLTR 197
GG R K+G V P F + L R
Sbjct: 81 TGGTVASRVDYKTG---AVHPAFTADDLIR 107
>sp|A9AA46|GATD_METM6 Glutamyl-tRNA(Gln) amidotransferase subunit D OS=Methanococcus
maripaludis (strain C6 / ATCC BAA-1332) GN=gatD PE=3
SV=1
Length = 418
Score = 30.8 bits (68), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 9/90 (10%)
Query: 109 SSSVVPQVQAVFPQGALTKKIK-VGLQVNLFKPRKNVPPAALKKITVNHIPKKKRFSLVW 167
+++V ++++ + G KKIK + + + KP+ +PP L+K PK K S++
Sbjct: 26 ENTIVIKMKSGYNVGLDKKKIKNIEILESGDKPKYGLPPLNLEKN-----PKLKNISILS 80
Query: 168 VGGGATVRSGEKSGKTDPVKPGFPSSRLTR 197
GG R K+G V P F + L R
Sbjct: 81 TGGTVASRVDYKTG---AVHPAFTADDLIR 107
>sp|O02828|TAU_CAPHI Microtubule-associated protein tau OS=Capra hircus GN=MAPT PE=2
SV=3
Length = 403
Score = 30.8 bits (68), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Query: 135 VNLFKPRKNVPPAALKKITVNHIPKKKRFS-LVWVGGGATVRSGEKSGKTDPVKPGFPSS 193
+ PR PP + IP K + G G + +SG++SG + P PG P S
Sbjct: 111 TKIATPRGAAPPGQKGQANATRIPAKTTPTPKTSPGTGESGKSGDRSGYSSPGSPGTPGS 170
Query: 194 R 194
R
Sbjct: 171 R 171
>sp|Q6TS35|TAU_SPECI Microtubule-associated protein tau OS=Spermophilus citellus GN=MAPT
PE=1 SV=3
Length = 430
Score = 30.8 bits (68), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 25/61 (40%), Gaps = 1/61 (1%)
Query: 135 VNLFKPRKNVPPAALKKITVNHIPKKKRFS-LVWVGGGATVRSGEKSGKTDPVKPGFPSS 193
+ PR PP IP K S G G +SG++SG + P PG P S
Sbjct: 138 TKIATPRGTAPPGQKGTANATRIPAKTTPSPKTPPGTGEPAKSGDRSGYSSPGSPGTPGS 197
Query: 194 R 194
R
Sbjct: 198 R 198
>sp|A2QGF0|NAGS_ASPNC Amino-acid acetyltransferase, mitochondrial OS=Aspergillus niger
(strain CBS 513.88 / FGSC A1513) GN=arg2 PE=3 SV=1
Length = 726
Score = 30.4 bits (67), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 52/126 (41%), Gaps = 25/126 (19%)
Query: 11 ARHLPALGVSRNMVDRPSIEQVKLCY--PGSVNVSVDIDQWPVNYKGILSVLTIL----- 63
A+ P LG+ D PSI+ +L + S N +D+ + G L+ L I
Sbjct: 545 AKDRPRLGL-----DDPSIDLPRLVHLIEDSFNRKLDVQDYLNRVNGRLAGLIIAGEYEG 599
Query: 64 ------DMPPPVEADPSRLTRILTMDFPHYFAVVSRVKQEVHAIGPEGGMVSSSVVPQVQ 117
++PP VE D S ++ + + FAV+ R + GG+ V+
Sbjct: 600 GAILTWELPPGVEDDGSEASQARMVPYLDKFAVLKRSQG-------AGGVADIVFNAMVR 652
Query: 118 AVFPQG 123
+ FP G
Sbjct: 653 SCFPNG 658
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.136 0.420
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80,096,119
Number of Sequences: 539616
Number of extensions: 3190428
Number of successful extensions: 6647
Number of sequences better than 100.0: 24
Number of HSP's better than 100.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 6633
Number of HSP's gapped (non-prelim): 25
length of query: 204
length of database: 191,569,459
effective HSP length: 112
effective length of query: 92
effective length of database: 131,132,467
effective search space: 12064186964
effective search space used: 12064186964
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)