Query psy5132
Match_columns 204
No_of_seqs 144 out of 972
Neff 6.4
Searched_HMMs 29240
Date Fri Aug 16 18:10:47 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5132.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/5132hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gdv_A L-asparaginase; NTN enz 100.0 2.2E-64 7.6E-69 444.0 21.4 200 1-202 111-310 (310)
2 3c17_A L-asparaginase precurso 100.0 7.4E-62 2.5E-66 429.8 18.7 196 1-196 113-314 (320)
3 1p4k_A N(4)-(beta-N-acetylgluc 100.0 1.2E-59 4E-64 411.0 23.0 185 1-190 96-288 (295)
4 2a8j_A Taspase 1, threonine as 100.0 3.2E-56 1.1E-60 405.3 16.8 194 1-195 157-397 (420)
5 1k2x_B Putative L-asparaginase 100.0 1.2E-49 4.1E-54 315.5 15.5 134 62-195 1-136 (143)
6 2gez_B L-asparaginase beta sub 100.0 2E-48 6.8E-53 305.2 13.2 130 62-194 1-132 (133)
7 1apy_B Aspartylglucosaminidase 100.0 1.3E-45 4.4E-50 291.3 14.9 123 62-184 1-128 (141)
8 2gez_A L-asparaginase alpha su 99.7 3.6E-19 1.2E-23 147.2 3.0 79 1-96 116-194 (195)
9 1k2x_A Putative L-asparaginase 99.2 4.3E-12 1.5E-16 103.4 2.4 46 1-46 113-158 (177)
10 1apy_A Aspartylglucosaminidase 99.0 1.1E-10 3.6E-15 93.9 4.1 44 1-47 96-139 (162)
11 2imh_A Hypothetical protein UN 91.0 0.6 2E-05 39.1 7.0 101 62-180 4-107 (231)
12 2qmc_B GGT, gamma-glutamyltran 83.0 12 0.0004 29.9 10.1 29 116-144 93-121 (188)
13 2nlz_A Cephalosporin acylase; 79.3 8.5 0.00029 35.8 9.1 79 59-144 355-468 (547)
14 2e0w_A Gamma-glutamyltranspept 78.7 10 0.00035 35.3 9.5 85 59-144 364-487 (556)
15 3g9k_S Capsule biosynthesis pr 78.6 22 0.00074 28.0 10.2 77 62-143 1-105 (177)
16 2dg5_B Gamma-glutamyltranspept 78.3 12 0.00039 30.0 8.6 28 116-144 94-121 (190)
17 2v36_B Gamma-glutamyltranspept 76.2 25 0.00084 28.2 10.0 28 117-144 84-111 (193)
18 4gdv_A L-asparaginase; NTN enz 70.5 2.8 9.4E-05 36.4 3.1 43 60-106 262-304 (310)
19 2i3o_A Gamma-glutamyltransfera 62.4 28 0.00097 32.0 8.4 84 59-144 328-441 (516)
20 2gez_B L-asparaginase beta sub 60.6 4.7 0.00016 30.7 2.4 25 156-180 1-25 (133)
21 1k2x_B Putative L-asparaginase 60.1 4.8 0.00016 31.1 2.4 25 156-180 1-25 (143)
22 1p4k_A N(4)-(beta-N-acetylgluc 57.3 7.6 0.00026 33.4 3.4 27 60-86 252-278 (295)
23 1apy_B Aspartylglucosaminidase 56.9 5.9 0.0002 30.5 2.4 24 156-179 1-24 (141)
24 3c17_A L-asparaginase precurso 45.9 11 0.00036 32.8 2.5 25 155-179 177-201 (320)
25 2a8j_A Taspase 1, threonine as 37.9 15 0.00051 33.1 2.3 25 155-179 233-257 (420)
26 3msh_A Hepatitis B virus X-int 36.2 26 0.0009 25.3 2.9 14 59-72 15-28 (99)
27 1m40_A TEM-1, beta-lactamase T 34.8 74 0.0025 25.1 5.9 36 141-176 3-39 (263)
28 1ryp_I 20S proteasome; multica 29.3 2E+02 0.0069 22.6 7.6 61 99-166 116-182 (222)
29 1uwz_A Cytidine deaminase; CDD 28.0 1E+02 0.0035 22.9 5.2 38 141-178 6-47 (136)
30 3k2n_A Sigma-54-dependent tran 26.8 1.7E+02 0.0058 20.6 7.2 47 123-169 6-53 (177)
31 3p01_A Two-component response 24.2 1.8E+02 0.0062 21.1 6.1 46 122-167 29-74 (184)
32 2kng_A Protein LSR2; DNA-bindi 24.0 1.1E+02 0.0038 19.6 4.0 31 13-44 17-47 (55)
33 1e25_A Extended-spectrum beta- 22.2 95 0.0033 24.8 4.4 35 140-175 3-38 (282)
34 2hz5_A Dynein light chain 2A, 21.8 58 0.002 23.5 2.6 28 141-169 13-40 (106)
35 1n9b_A Penicillinase, beta-lac 20.6 1.7E+02 0.0057 23.1 5.5 33 143-175 5-38 (265)
36 3ub6_A Chemoreceptor TLPB; hom 20.5 2.6E+02 0.0087 21.3 6.4 47 123-169 34-82 (181)
37 3qhy_A Beta-lactamase; enyzme- 20.4 91 0.0031 25.6 3.9 44 136-180 8-53 (271)
38 2wuq_A BLAB, beta-lactamase re 20.4 1.1E+02 0.0038 24.9 4.5 33 142-175 7-40 (318)
39 1ctt_A Cytidine deaminase; hyd 20.3 3.2E+02 0.011 23.0 7.5 43 134-176 45-92 (294)
40 3cpt_A Mitogen-activated prote 20.2 1.4E+02 0.0047 22.8 4.6 38 139-176 21-58 (143)
No 1
>4gdv_A L-asparaginase; NTN enzyme, homodimer, hydrolase, L-asparagine; 1.75A {Homo sapiens} PDB: 4gdu_A 4gdt_A 4gdw_A
Probab=100.00 E-value=2.2e-64 Score=444.03 Aligned_cols=200 Identities=46% Similarity=0.712 Sum_probs=183.7
Q ss_pred CCCCCCeEEecHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCccCCCCCCCceeEEEEcCCCCEEEEecC
Q psy5132 1 MEKTPHGILSGDGANEFGRRMGLPQIPDSELITENAKHALEKFLCEGQDPNVTEIGGGGVGTVGAVAVDARGHMVSCTST 80 (204)
Q Consensus 1 me~t~h~lLvG~gA~~fA~~~G~~~~~~~~l~T~~~~~~~~~~~~~~~~~~~~~~~~~~~dTVGaVa~D~~G~~AaatST 80 (204)
||++||+||+|+||++||+++||+.++|++|+|++++++|++|++... ....... ..+||||+||+|.+||+|++|||
T Consensus 111 me~t~h~~LvG~gA~~fA~~~G~~~~~~~~~~t~~~~~~~~~~~~~~~-~~~~~~~-~~~dTVG~ValD~~G~iaaaTST 188 (310)
T 4gdv_A 111 MEKTPHCFLTDQGAAQFAAAMGVPEIPGEKLVTERNKKRLEKEKHEKG-AQKTDCQ-KNLGTVGAVALDCKGNVAYATST 188 (310)
T ss_dssp HHHSSCSEEEHHHHHHHHHHTTCCCCCGGGTCCHHHHHHHHHHTC-------------CCCCEEEEEECTTSCEEEEEEE
T ss_pred HhcCCCccccCcHHHHHHHHhCCCccCCcccccHHHHHHHHHHHhhhc-ccccccc-cccCceeeEEEeCCCCEEEEECC
Confidence 689999999999999999999999999999999999999999976541 1111112 47999999999999999999999
Q ss_pred CCCCCCccccccCCCCcCCceeeeCCeeEEEecCchhHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCceeeE
Q psy5132 81 GGITGKMKGRVGDTPIPGSGGYCDDNIASVSTTGHGDSILRYCVAHRILHYIEQGLSATEASQKALDGMRTRVGKTAGAI 160 (204)
Q Consensus 81 GG~~~K~~GRVGdspi~GaG~yAd~~~~a~s~TG~GE~iir~~lA~~i~~~l~~g~~~~~A~~~~i~~~~~~~~~~~GvI 160 (204)
||+++|+|||||||||||||+||||+++||||||+||+|||+++|++|+++|++|++|++|++.+|+++.+++++++|+|
T Consensus 189 gG~~~K~~GRVGDspiiGaG~yAdn~~gavs~TG~GE~iir~~~A~~i~~~m~~G~s~~eA~~~~i~~~~~~~~g~gG~I 268 (310)
T 4gdv_A 189 GGIVNKMVGRVGDSPCLGAGGYADNDIGAVSTTGHGESILKVNLARLTLFHIEQGKTVEEAADLSLGYMKSRVKGLGGLI 268 (310)
T ss_dssp CCSTTCCTTBCCSTTSBTTTEEEETTTEEEEEEECHHHHHHHTHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHCCCEEEE
T ss_pred CCcccCCCCCCCCcCcCCceeEecCCcEEEEeecCcHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHhcCCcEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCcEEEEEcCCCCeeEEEeCCeEEEEEecCCCcccccc
Q psy5132 161 TVTKCGKVGVYFNSPKMAWAYIRGTKLHYGIYPGQDIEEDLA 202 (204)
Q Consensus 161 ~v~~~G~~~~a~~t~~m~~a~~~~~~~~~~~~~~~~~~~~~~ 202 (204)
+||++|+++++|||++|+|||+.+++++++++++|..+.++|
T Consensus 269 avd~~G~~~~~~nt~gM~~a~~~~G~~~~~i~~~~~~~~~~p 310 (310)
T 4gdv_A 269 VVSKTGDWVAKWTSTSMPWAAAKDGKLHFGIDPDDTTITDLP 310 (310)
T ss_dssp EEETTSCEEEEESSSBCCEEEEETTEEEEESSTTCCEEEECC
T ss_pred EEeCCCCEEEEECCCCceEEEEECCEEEEeECCCcccccCCC
Confidence 999999999999999999999999999999999998877665
No 2
>3c17_A L-asparaginase precursor; isoaspartyl peptidase, NTN-hydrolase, autoprot precursor, hydrolase; 1.95A {Escherichia coli} PDB: 2zak_A
Probab=100.00 E-value=7.4e-62 Score=429.79 Aligned_cols=196 Identities=32% Similarity=0.480 Sum_probs=176.9
Q ss_pred CCCCCCeEEecHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHHHHhcCCCCCC----ccCCCCCCCceeEEEEcCCCCEEE
Q psy5132 1 MEKTPHGILSGDGANEFGRRMGLPQIPDSELITENAKHALEKFLCEGQDPNV----TEIGGGGVGTVGAVAVDARGHMVS 76 (204)
Q Consensus 1 me~t~h~lLvG~gA~~fA~~~G~~~~~~~~l~T~~~~~~~~~~~~~~~~~~~----~~~~~~~~dTVGaVa~D~~G~~Aa 76 (204)
||++||+||||+||++||+++||+.++|++|+|++++++|++++++.....+ ...+...+|||||||+|.+|||||
T Consensus 113 me~t~h~lLvG~GA~~fA~~~G~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dTVGaValD~~G~lAa 192 (320)
T 3c17_A 113 MEQSPHVMMIGEGAENFAFARGMERVSPEIFSTSLRYEQLLAARKEGATVLDHSGAPLDEKQKMGAVGAVALDLDGNLAA 192 (320)
T ss_dssp HHHSSCSEEEHHHHHHHHHHTTCCCCCGGGGCCHHHHHHHHHHHCCCC--------SEECTTTCCCEEEEEECTTSCEEE
T ss_pred HhcCCCeEEEcHHHHHHHHHcCCCccccccccCHHHHHHHHHHHhccccccCcccccccCcCCCCCEEEEEEeCCCCEEE
Confidence 6889999999999999999999999999999999999999998865410000 001123689999999999999999
Q ss_pred EecCCCCCCCccccccCCCCcCCceeeeCCeeEEEecCchhHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHcCC
Q psy5132 77 CTSTGGITGKMKGRVGDTPIPGSGGYCDDNIASVSTTGHGDSILRYCVAHRILHYIE-QGLSATEASQKALDGMRTRVGK 155 (204)
Q Consensus 77 atSTGG~~~K~~GRVGdspi~GaG~yAd~~~~a~s~TG~GE~iir~~lA~~i~~~l~-~g~~~~~A~~~~i~~~~~~~~~ 155 (204)
+|||||+++|+|||||||||||||+|||+..+||||||+||+|||+++|++|+++|+ +|++|++|++++|+++..++++
T Consensus 193 aTSTGG~~~K~~GRVGDspiiGaG~yAd~~~~avs~TG~GE~iir~~~A~~i~~~m~~~g~s~~~A~~~~i~~~~~~~~g 272 (320)
T 3c17_A 193 ATSTGGMTNKLPGRVGDSPLVGAGCYANNASVAVSCTGTGEVFIRALAAYDIAALMDYGGLSLAEACERVVMEKLPALGG 272 (320)
T ss_dssp EEEECCCTTBCTTEECSTTSBTTTEEECTTSEEEEEEECHHHHHHTTHHHHHHHHHHTTCCCHHHHHHHHHHTHHHHTTC
T ss_pred EEcCCCcCCCCCCcccCcCCcCceEeecCCcEEEEeecChHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHhcCC
Confidence 999999999999999999999999999999999999999999999999999999999 9999999999999877777788
Q ss_pred ceeeEEecCCCcEEEEEcCCCCeeEEEeC-CeEEEEEecCCC
Q psy5132 156 TAGAITVTKCGKVGVYFNSPKMAWAYIRG-TKLHYGIYPGQD 196 (204)
Q Consensus 156 ~~GvI~v~~~G~~~~a~~t~~m~~a~~~~-~~~~~~~~~~~~ 196 (204)
.+|+|+||++|+++++|||++|+|||+.. +.+++.++++|.
T Consensus 273 ~gGvIavd~~G~~~~~~nt~~m~~a~~~~~~~~~~~i~~~~~ 314 (320)
T 3c17_A 273 SGGLIAIDHEGNVALPFNTEGMYRAWGYAGDTPTTGIYREKG 314 (320)
T ss_dssp CEEEEEEETTCCEECCBSSSEEEEEEEETTSCCEEESSCCC-
T ss_pred ceEEEEEcCCCCEEEEecCCCceEEEEcCCCCEEEEEECCCC
Confidence 89999999999999999999999999976 688999998763
No 3
>1p4k_A N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase; alpha beta, beta alpha, sandwich, hydrolase; 1.90A {Elizabethkingia meningoseptica} SCOP: d.153.1.5 PDB: 1p4v_A 9gaa_A 9gaf_A 9gac_A 3ljq_A 2gl9_A* 1ayy_A 2gaw_A 2gac_A* 2gaw_B 1ayy_B 2gl9_B* 2gac_B*
Probab=100.00 E-value=1.2e-59 Score=410.99 Aligned_cols=185 Identities=31% Similarity=0.534 Sum_probs=167.6
Q ss_pred CCCCCCeEEecHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCccCCCCCCCceeEEEEcCCCCEEEEecC
Q psy5132 1 MEKTPHGILSGDGANEFGRRMGLPQIPDSELITENAKHALEKFLCEGQDPNVTEIGGGGVGTVGAVAVDARGHMVSCTST 80 (204)
Q Consensus 1 me~t~h~lLvG~gA~~fA~~~G~~~~~~~~l~T~~~~~~~~~~~~~~~~~~~~~~~~~~~dTVGaVa~D~~G~~AaatST 80 (204)
||++||+||+|+||++||+++||+ +++|+|++++++|++|++.....+. .+...||||||||+|.+|||||+|||
T Consensus 96 me~t~h~lLvG~gA~~fA~~~G~~---~~~l~T~~~~~~~~~~~~~~~~~~~--~~~~~~dTVGaValD~~G~lAaaTST 170 (295)
T 1p4k_A 96 MEKTPHVMLVGDGALEFALSQGFK---KENLLTAESEKEWKEWLKTSQYKPI--VNIENHNTIGMIALDAQGNLSGACTT 170 (295)
T ss_dssp HHHSSCSEEEHHHHHHHHHHTTCC---CCCCCCHHHHHHHHHHHTTCCCCCC--BSSSBBCCEEEEEECTTSCEEEEEEE
T ss_pred hhcCCCeEEECHHHHHHHHHcCCC---cccCCCHHHHHHHHHHHhhcccCcc--cccCCCCCEEEEEEcCCCCEEEEEcc
Confidence 689999999999999999999998 6899999999999999976521111 11236899999999999999999999
Q ss_pred CCCCCCccccccCCCCcCCceeeeCCeeEEEecCchhHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHc-------
Q psy5132 81 GGITGKMKGRVGDTPIPGSGGYCDDNIASVSTTGHGDSILRYCVAHRILHYIEQGLSATEASQKALDGMRTRV------- 153 (204)
Q Consensus 81 GG~~~K~~GRVGdspi~GaG~yAd~~~~a~s~TG~GE~iir~~lA~~i~~~l~~g~~~~~A~~~~i~~~~~~~------- 153 (204)
||+++|+|||||||||||||+||||.++||||||+||+|||.++|++|+++|++|++|++|++++|+++.+++
T Consensus 171 gG~~~K~~GRVGDspiiGaG~yAd~~~gavs~TG~GE~iir~~~A~~i~~~m~~G~s~~~A~~~ai~~~~~~~~~~~~~~ 250 (295)
T 1p4k_A 171 SGMAYKMHGRVGDSPIIGAGLFVDNEIGAATATGHGEEVIRTVGTHLVVELMNQGRTPQQACKEAVERIVKIVNRRGKNL 250 (295)
T ss_dssp CCSTTCCTTBCCSTTSBTTTEEEETTTEEEEEEECHHHHHHHTHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHTTCCG
T ss_pred CCccCCCCCccCCcCCCCceeeecCCcEEEEeecccHHHHhhhHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999988763
Q ss_pred -CCceeeEEecCCCcEEEEEcCCCCeeEEEeCCeEEEE
Q psy5132 154 -GKTAGAITVTKCGKVGVYFNSPKMAWAYIRGTKLHYG 190 (204)
Q Consensus 154 -~~~~GvI~v~~~G~~~~a~~t~~m~~a~~~~~~~~~~ 190 (204)
++.+|+|+||++|+++++|||+.|+|+|.+++.....
T Consensus 251 ~~~~gG~Iavd~~G~~~~~~nt~~m~~~~~~~~~~~~~ 288 (295)
T 1p4k_A 251 KDIQVGFIALNKKGEYGAYCIQDGFNFAVHDQKGNRLE 288 (295)
T ss_dssp GGCCEEEEEEETTSCEEEEESSTTCCEEEEETTEEEEE
T ss_pred CCceEEEEEEcCCCCEEEEecCCCceEEEEcCCCCcee
Confidence 3569999999999999999999999999988765543
No 4
>2a8j_A Taspase 1, threonine aspartase 1; MLL, glycosylspraginase, asparaginase, hydrolase; 1.90A {Homo sapiens} PDB: 2a8i_A 2a8m_A 2a8l_A
Probab=100.00 E-value=3.2e-56 Score=405.29 Aligned_cols=194 Identities=25% Similarity=0.377 Sum_probs=144.0
Q ss_pred CCCCCCeEEecHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHHHHhcCC--CCC--C-----c-------cCCCCCCCcee
Q psy5132 1 MEKTPHGILSGDGANEFGRRMGLPQIPDSELITENAKHALEKFLCEGQ--DPN--V-----T-------EIGGGGVGTVG 64 (204)
Q Consensus 1 me~t~h~lLvG~gA~~fA~~~G~~~~~~~~l~T~~~~~~~~~~~~~~~--~~~--~-----~-------~~~~~~~dTVG 64 (204)
||++||+||||+||++||+++||+.++|++|+|++++++|++|++... ++. + . +.....|||||
T Consensus 157 me~tpH~lLvGeGA~~FA~~~G~~~~~~~~l~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dTVG 236 (420)
T 2a8j_A 157 AGRIPPCFLVGEGAYRWAVDHGIPSCPPNIMTTRFSLAAFKRNKRKLELAERVDTDFMQLKKRRQSSEKENDSGTLDTVG 236 (420)
T ss_dssp -CCCCCSEEEHHHHHHHHHHTTCCBCC--------------------------------------------------CEE
T ss_pred ccCCCCeEEecHHHHHHHHHcCCCcCChhhcCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccCCCCEE
Confidence 789999999999999999999999999999999999999999987541 000 0 0 00113689999
Q ss_pred EEEEcCCCCEEEEecCCCCCCCccccccCCCCcCCceeeeCC------eeEEEecCchhHHHHHHHHHHHHHHHHcCCCH
Q psy5132 65 AVAVDARGHMVSCTSTGGITGKMKGRVGDTPIPGSGGYCDDN------IASVSTTGHGDSILRYCVAHRILHYIEQGLSA 138 (204)
Q Consensus 65 aVa~D~~G~~AaatSTGG~~~K~~GRVGdspi~GaG~yAd~~------~~a~s~TG~GE~iir~~lA~~i~~~l~~g~~~ 138 (204)
|||+|.+|||||||||||+++|+|||||||||||||+|||+. ++||||||+||+|||+++|++|+.+| .+.++
T Consensus 237 aVAlD~~G~lAAaTSTGG~~~K~pGRVGDSPiiGAG~yAd~~~~~~~~~~Avs~TG~GE~iiR~~~A~~~~~~~-~~~~a 315 (420)
T 2a8j_A 237 AVVVDHEGNVAAAVSSGGLALKHPGRVGQAALYGCGCWAENTGAHNPYSTAVSTSGCGEHLVRTILARECSHAL-QAEDA 315 (420)
T ss_dssp EEEEETTCCEEEEEEECCSTTCCTTBCCGGGSTTTSEEEECCBTTBSSEEEEEEEECHHHHHHTTHHHHHHHHT-TSSCH
T ss_pred EEEEeCCCCEEEEEcCCCCcCCCCCcccCCCcccceeeecCCCccCcceEEEEcccCchHHHHHHHHHHHHHHh-CcchH
Confidence 999999999999999999999999999999999999999998 89999999999999999999999998 67788
Q ss_pred HHHHHHHHHHHHH-------HcCCceeeEEecCC----------------CcEEEEEcCCCCeeEEEeC--CeEEEEEec
Q psy5132 139 TEASQKALDGMRT-------RVGKTAGAITVTKC----------------GKVGVYFNSPKMAWAYIRG--TKLHYGIYP 193 (204)
Q Consensus 139 ~~A~~~~i~~~~~-------~~~~~~GvI~v~~~----------------G~~~~a~~t~~m~~a~~~~--~~~~~~~~~ 193 (204)
.+|+..+|.+... ..++.+|+|+||++ |+++++|||++|+|||+.. +++++.+++
T Consensus 316 ~~a~~~~i~~~~~~~~~~~~~~gg~gGvIavd~~~~~~~~~~~~~~~g~~G~~~~~~nT~~M~~g~~~~~~~~~~~~i~~ 395 (420)
T 2a8j_A 316 HQALLETMQNKFISSPFLASEDGVLGGVIVLRSCRCSAEPDSSQNKQTLLVEFLWSHTTESMCVGYMSAQDGKAKTHISR 395 (420)
T ss_dssp HHHHHHHHHHTTTTCGGGTTCSSCCEEEEEEEEC--------------CEEEEEEEESSSEEEEEEEETTTCSCEEEEEE
T ss_pred HHHHHHHHHHHhhccccccccCCCcceEEEEEccccccccccccccccceEEEEEEeCCchhceEEEecCCCCcEEEEEe
Confidence 8887777743211 12567999999983 7999999999999999964 688888887
Q ss_pred CC
Q psy5132 194 GQ 195 (204)
Q Consensus 194 ~~ 195 (204)
..
T Consensus 396 ~~ 397 (420)
T 2a8j_A 396 LP 397 (420)
T ss_dssp CC
T ss_pred CC
Confidence 53
No 5
>1k2x_B Putative L-asparaginase; NTN hydrolase, asparginase, autoproteolysis, hydrolase; HET: CME; 1.65A {Escherichia coli} SCOP: d.153.1.5 PDB: 1jn9_B* 1t3m_B 2zal_B
Probab=100.00 E-value=1.2e-49 Score=315.46 Aligned_cols=134 Identities=37% Similarity=0.585 Sum_probs=128.1
Q ss_pred ceeEEEEcCCCCEEEEecCCCCCCCccccccCCCCcCCceeeeCCeeEEEecCchhHHHHHHHHHHHHHHHH-cCCCHHH
Q psy5132 62 TVGAVAVDARGHMVSCTSTGGITGKMKGRVGDTPIPGSGGYCDDNIASVSTTGHGDSILRYCVAHRILHYIE-QGLSATE 140 (204)
Q Consensus 62 TVGaVa~D~~G~~AaatSTGG~~~K~~GRVGdspi~GaG~yAd~~~~a~s~TG~GE~iir~~lA~~i~~~l~-~g~~~~~ 140 (204)
|||+||+|.+|||||+|||||+++|+|||||||||||||+|||++.+||||||+||+|||+++|++|+++|+ +|++|++
T Consensus 1 TVGaValD~~G~iAaaTSTgG~~~K~~GRVGDspiiGaG~yAd~~~~a~s~TG~GE~iir~~~A~~i~~~m~~~g~s~~e 80 (143)
T 1k2x_B 1 TVGAVALDLDGNLAAATSTGGMTNKLPGRVGDSPLVGAGCYANNASVAVSCTGTGEVFIRALAAYDIAALMDYGGLSLAE 80 (143)
T ss_dssp CEEEEEECTTSCEEEEEEECCCTTBCTTEECSTTSBTTTEEECTTSEEEEEEECHHHHHHTTHHHHHHHHHHTTCCCHHH
T ss_pred CeEEEEEeCCCCEEEEECCCCcCCCcCCcccCCCccceEEEEcCCcEEEEeccChHHHHHHHHHHHHHHHHHhcCCCHHH
Confidence 899999999999999999999999999999999999999999999999999999999999999999999999 8999999
Q ss_pred HHHHHHHHHHHHcCCceeeEEecCCCcEEEEEcCCCCeeEEEeC-CeEEEEEecCC
Q psy5132 141 ASQKALDGMRTRVGKTAGAITVTKCGKVGVYFNSPKMAWAYIRG-TKLHYGIYPGQ 195 (204)
Q Consensus 141 A~~~~i~~~~~~~~~~~GvI~v~~~G~~~~a~~t~~m~~a~~~~-~~~~~~~~~~~ 195 (204)
|++++|+++..++++.+|+|+||++|+++++|||++|+|+|+.. +++++.+++++
T Consensus 81 A~~~~i~~~~~~~~g~~GvIavd~~G~~~~~~nt~~m~~a~~~~~~~~~~~i~~~~ 136 (143)
T 1k2x_B 81 ACERVVMEKLPALGGSGGLIAIDHEGNVALPFNTEGMYRAWGYAGDTPTTGIYREK 136 (143)
T ss_dssp HHHHHHHTHHHHTTCCEEEEEEETTCCEECCBSSSEEEEEEEETTSCCEEEEECC-
T ss_pred HHHHHHHHHHHhcCCceEEEEECCCCCEEEEEcCCCceEEEEcCCCCEEEEEEcCC
Confidence 99999988777788899999999999999999999999999976 68899998864
No 6
>2gez_B L-asparaginase beta subunit; isoaspartyl aminopeptidase, NTN-hydrolase, autoproteolysis, taspase, sodium binding, hydrolase; 2.60A {Lupinus luteus}
Probab=100.00 E-value=2e-48 Score=305.23 Aligned_cols=130 Identities=39% Similarity=0.629 Sum_probs=123.1
Q ss_pred ceeEEEEcCCCCEEEEecCCCCCCCccccccCCCCcCCceeeeCCeeEEEecCchhHHHHHHHHHHHHHHHH-cCCCHHH
Q psy5132 62 TVGAVAVDARGHMVSCTSTGGITGKMKGRVGDTPIPGSGGYCDDNIASVSTTGHGDSILRYCVAHRILHYIE-QGLSATE 140 (204)
Q Consensus 62 TVGaVa~D~~G~~AaatSTGG~~~K~~GRVGdspi~GaG~yAd~~~~a~s~TG~GE~iir~~lA~~i~~~l~-~g~~~~~ 140 (204)
|||+||+|.+|||||+|||||+++|+|||||||||||||+|||++ +||||||+||+|||+++|++|+++|+ +|++|++
T Consensus 1 TVGaValD~~G~iAaatSTgG~~~K~~GRVGDspiiGaG~yAd~~-~a~s~TG~GE~iir~~~a~~i~~~m~~~g~~~~~ 79 (133)
T 2gez_B 1 TVGCVAVDSHGNLASATSTGGLVNKMVGRIGDTPLIGAGTYANEL-CAVSATGKGEEIIRATVARDVAALMEFKGLSLKE 79 (133)
T ss_dssp CEEEEEECTTCCEEEEEEECCSTTBCTTEECSTTSBTTTEEECSS-EEEEEEECHHHHHHTTHHHHHHHHHHHHCCCHHH
T ss_pred CEEEEEEeCCCCEEEEECCCCcCCCcCCEecCCCcccceeEEcCC-ceEEeecChHHHHHHHHHHHHHHHHHHcCCCHHH
Confidence 899999999999999999999999999999999999999999998 99999999999999999999999999 9999999
Q ss_pred HHHHHHHHHHHHcCCceeeEEecCCCcEEEEEcCCCCeeEEEeC-CeEEEEEecC
Q psy5132 141 ASQKALDGMRTRVGKTAGAITVTKCGKVGVYFNSPKMAWAYIRG-TKLHYGIYPG 194 (204)
Q Consensus 141 A~~~~i~~~~~~~~~~~GvI~v~~~G~~~~a~~t~~m~~a~~~~-~~~~~~~~~~ 194 (204)
|++++|+++.+ ++.+|+|+||++|+++++|||++|+|+|+.. +++++.++++
T Consensus 80 A~~~~i~~~~~--~g~~GvIavd~~G~~~~~~nt~~m~~a~~~~~~~~~~~i~~~ 132 (133)
T 2gez_B 80 AADFVIHERTP--KGTVGLIAVSAAGEIAMPFNTTGMFRACATEDGYSEIAIWPT 132 (133)
T ss_dssp HHHHHHHTSSC--TTSEEEEEEETTSCEECCBSSSEEEEEEEETTSCEEEESSCC
T ss_pred HHHHHHHHHhc--CCcEEEEEEeCCCcEEEEeCCCCceEEEEcCCCCEEEEEeCC
Confidence 99999987554 6779999999999999999999999999976 6888888754
No 7
>1apy_B Aspartylglucosaminidase; glycosylasparaginase, hydrolase; HET: NAG BMA; 2.00A {Homo sapiens} SCOP: d.153.1.5 PDB: 1apz_B*
Probab=100.00 E-value=1.3e-45 Score=291.31 Aligned_cols=123 Identities=32% Similarity=0.583 Sum_probs=117.1
Q ss_pred ceeEEEEcCCCCEEEEecCCCCCCCccccccCCCCcCCceeeeCCeeEEEecCchhHHHHHHHHHHHHHHHHcCCCHHHH
Q psy5132 62 TVGAVAVDARGHMVSCTSTGGITGKMKGRVGDTPIPGSGGYCDDNIASVSTTGHGDSILRYCVAHRILHYIEQGLSATEA 141 (204)
Q Consensus 62 TVGaVa~D~~G~~AaatSTGG~~~K~~GRVGdspi~GaG~yAd~~~~a~s~TG~GE~iir~~lA~~i~~~l~~g~~~~~A 141 (204)
|||+||+|.+|||||+|||||+++|+|||||||||||||+||||+++||||||+||+|||.++|++|+++|++|++|++|
T Consensus 1 TVGaValD~~G~lAaaTSTGG~~~K~~GRVGDspiiGaG~yAd~~~ga~s~TG~GE~iiR~~~A~~iv~~m~~G~~~~~A 80 (141)
T 1apy_B 1 TIGMVVIHKTGHIAAGTSTNGIKFKIHGRVGDSPIPGAGAYADDTAGAAAATGNGDILMRFLPSYQAVEYMRRGEDPTIA 80 (141)
T ss_dssp CEEEEEECTTSCEEEEEEECCSTTCCTTEECSTTSBTTTEEEETTTEEEEEEECHHHHGGGCHHHHHHHHHHTTCCHHHH
T ss_pred CEEEEEEeCCCCEEEEECCCCcCCccCceecCccccceeEEEcCCcEEEEeecChHHHHHHhHHHHHHHHHHcCCCHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcC-CceeeEEecCCCcEEEEEcC----CCCeeEEEeC
Q psy5132 142 SQKALDGMRTRVG-KTAGAITVTKCGKVGVYFNS----PKMAWAYIRG 184 (204)
Q Consensus 142 ~~~~i~~~~~~~~-~~~GvI~v~~~G~~~~a~~t----~~m~~a~~~~ 184 (204)
++++|+++.++++ ..+|+|+||++|+++++||+ ..|+|.+.++
T Consensus 81 ~~~~i~~~~~~~~~~~ggvIa~d~~G~~~~~~n~~~~~~~F~~~v~~~ 128 (141)
T 1apy_B 81 CQKVISRIQKHFPEFFGAVICANVTGSYGAACNKLSTFTQFSFMVYNS 128 (141)
T ss_dssp HHHHHHHHHHHCTTCCEEEEEEETTSCEEEEECCBTTBCEEEEEEECS
T ss_pred HHHHHHHHHHhcCCCcEEEEEEeCCCCEEEEeccCCCCCCeeEEEEcC
Confidence 9999999998876 56899999999999999998 4677877665
No 8
>2gez_A L-asparaginase alpha subunit; isoaspartyl aminopeptidase, NTN-hydrolase, autoproteolysis, taspase, sodium binding, hydrolase; 2.60A {Lupinus luteus}
Probab=99.74 E-value=3.6e-19 Score=147.24 Aligned_cols=79 Identities=24% Similarity=0.291 Sum_probs=44.8
Q ss_pred CCCCCCeEEecHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCccCCCCCCCceeEEEEcCCCCEEEEecC
Q psy5132 1 MEKTPHGILSGDGANEFGRRMGLPQIPDSELITENAKHALEKFLCEGQDPNVTEIGGGGVGTVGAVAVDARGHMVSCTST 80 (204)
Q Consensus 1 me~t~h~lLvG~gA~~fA~~~G~~~~~~~~l~T~~~~~~~~~~~~~~~~~~~~~~~~~~~dTVGaVa~D~~G~~AaatST 80 (204)
||++||+||+|+||++||+++||+.++|++|+|++++++|++|++... ..++. ..++.-..++
T Consensus 116 me~t~hvlLvG~GA~~fA~~~G~~~~~~~~l~T~~~~~~~~~~~~~~~---------~~~~~--------~~~v~p~~~~ 178 (195)
T 2gez_A 116 MDKTPHIYLAFQGAQDFAKQQGVETVDSSHLITAENVERLKLAIEANR---------VQVDY--------SQYNYPEPVK 178 (195)
T ss_dssp HHHSSCSEEEHHHHHHHHHHHTCCBCCGGGGCCHHHHHHHHHHHHHC---------------------------------
T ss_pred HccCCCeEEEcHHHHHHHHHcCCCccChhhcCCHHHHHHHHHHHHhcc---------CCccc--------cccCCCCCcC
Confidence 688999999999999999999999999999999999999999997640 11221 2344445566
Q ss_pred CCCCCCccccccCCCC
Q psy5132 81 GGITGKMKGRVGDTPI 96 (204)
Q Consensus 81 GG~~~K~~GRVGdspi 96 (204)
.|+.+|+|||||||||
T Consensus 179 ~g~~~k~pgrvgd~~~ 194 (195)
T 2gez_A 179 DDAEKELPLTNGDSQI 194 (195)
T ss_dssp ----------------
T ss_pred CccccccCcccCCCCC
Confidence 6999999999999997
No 9
>1k2x_A Putative L-asparaginase; NTN hydrolase, asparginase, autoproteolysis, hydrolase; HET: CME; 1.65A {Escherichia coli} SCOP: d.153.1.5 PDB: 1jn9_A* 1t3m_A 2zal_A
Probab=99.19 E-value=4.3e-12 Score=103.42 Aligned_cols=46 Identities=26% Similarity=0.378 Sum_probs=42.4
Q ss_pred CCCCCCeEEecHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHHHHhc
Q psy5132 1 MEKTPHGILSGDGANEFGRRMGLPQIPDSELITENAKHALEKFLCE 46 (204)
Q Consensus 1 me~t~h~lLvG~gA~~fA~~~G~~~~~~~~l~T~~~~~~~~~~~~~ 46 (204)
||++||+||||+||++||+++||+.++|++|+|++++++|++|++.
T Consensus 113 me~t~hvlLvG~GA~~fA~~~G~~~~~~~~~~T~~~~~~~~~~~~~ 158 (177)
T 1k2x_A 113 MEQSPHVMMIGEGAENFAFARGMERVSPEIFSTSLRYEQLLAARKE 158 (177)
T ss_dssp HHHSSCSEEEHHHHHHHHHTTTCCCCCGGGGCCHHHHHHHHHHC--
T ss_pred HccCCCeEEEcHHHHHHHHHcCCCccCcccccCHHHHHHHHHHHhc
Confidence 6889999999999999999999999999999999999999998754
No 10
>1apy_A Aspartylglucosaminidase; glycosylasparaginase, hydrolase; HET: NAG BMA; 2.00A {Homo sapiens} SCOP: d.153.1.5 PDB: 1apz_A*
Probab=99.04 E-value=1.1e-10 Score=93.89 Aligned_cols=44 Identities=27% Similarity=0.519 Sum_probs=41.3
Q ss_pred CCCCCCeEEecHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHHHHhcC
Q psy5132 1 MEKTPHGILSGDGANEFGRRMGLPQIPDSELITENAKHALEKFLCEG 47 (204)
Q Consensus 1 me~t~h~lLvG~gA~~fA~~~G~~~~~~~~l~T~~~~~~~~~~~~~~ 47 (204)
||++||+||+|+||++||+++||+. ++|+|++++++|++|++..
T Consensus 96 me~t~HvlLvG~GA~~fA~~~G~~~---~~l~t~~~~~~~~~~~~~~ 139 (162)
T 1apy_A 96 LEHTTHTLLVGESATTFAQSMGFIN---EDLSTSASQALHSDWLARN 139 (162)
T ss_dssp HHHBSCSEEEHHHHHHHHHHTTCCC---CCCCCHHHHHHHHHHHHTT
T ss_pred HhcCCCeEEEcHHHHHHHHHcCCCc---cccCCHHHHHHHHHHHHhc
Confidence 6889999999999999999999985 7899999999999999866
No 11
>2imh_A Hypothetical protein UNP Q5LQD5_silpo; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.57A {Silicibacter pomeroyi} SCOP: d.153.1.7
Probab=91.02 E-value=0.6 Score=39.06 Aligned_cols=101 Identities=16% Similarity=0.171 Sum_probs=66.8
Q ss_pred ceeEEEEcCC-CCEEEEecCCCCCCCccccccCCCCcCCc-eeeeCCeeEEEecCchhHHHHHHH-HHHHHHHHHcCCCH
Q psy5132 62 TVGAVAVDAR-GHMVSCTSTGGITGKMKGRVGDTPIPGSG-GYCDDNIASVSTTGHGDSILRYCV-AHRILHYIEQGLSA 138 (204)
Q Consensus 62 TVGaVa~D~~-G~~AaatSTGG~~~K~~GRVGdspi~GaG-~yAd~~~~a~s~TG~GE~iir~~l-A~~i~~~l~~g~~~ 138 (204)
|--.|++|.. |.+.+|++|+-+. +|+= -|+...+|||++=. +..-.+ ...+.++|++|.++
T Consensus 4 TFSIvardp~tG~~GvAvaS~~~a------------VGa~vp~~~agvGAVATQ~----~tnp~l~G~~gL~lL~~G~~a 67 (231)
T 2imh_A 4 TFSILAHDPETGAIGGAAATGSLC------------VGGWVLRGDLNAGMSASQG----AAPSTFWGEEVLQHLRDGSHP 67 (231)
T ss_dssp EEEEEEEETTTTEEEEEEEESSSC------------HHHHHEEEETTTEEEEEES----SSCCHHHHHHHHHHHHTTCCH
T ss_pred EEEEEEEcCCCCcEEEEEEecCcc------------cccccccccCCcceEEecc----cCCccccCHHHHHHHHcCCCH
Confidence 6667888865 7788888876432 2221 35666677777654 234556 77889999999999
Q ss_pred HHHHHHHHHHHHHHcCCceeeEEecCCCcEEEEEcCCCCeeE
Q psy5132 139 TEASQKALDGMRTRVGKTAGAITVTKCGKVGVYFNSPKMAWA 180 (204)
Q Consensus 139 ~~A~~~~i~~~~~~~~~~~GvI~v~~~G~~~~a~~t~~m~~a 180 (204)
++|++..++.=..+ .+-=+.+||.+|+.+...-.+...|+
T Consensus 68 ~~al~~l~~~D~~~--~~RQ~~vvD~~G~~A~~TG~~~~~~~ 107 (231)
T 2imh_A 68 EDAVNHVTSQDSGR--AYRQLAAMDLLGNAAAFTGSENQDIK 107 (231)
T ss_dssp HHHHHHHHHTCTTG--GGCEEEEEETTSCEEEEECTTSCSSC
T ss_pred HHHHHHHHhcCCCc--ccceEEEECCCCCeEEEECCCchhhh
Confidence 99998887532211 12235667899987655445566663
No 12
>2qmc_B GGT, gamma-glutamyltranspeptidase; NTN-hydrolase, transferase; HET: GTB; 1.55A {Helicobacter pylori} PDB: 2qm6_B* 2nqo_B* 3fnm_B*
Probab=82.95 E-value=12 Score=29.90 Aligned_cols=29 Identities=24% Similarity=0.260 Sum_probs=22.3
Q ss_pred hhHHHHHHHHHHHHHHHHcCCCHHHHHHH
Q psy5132 116 GDSILRYCVAHRILHYIEQGLSATEASQK 144 (204)
Q Consensus 116 GE~iir~~lA~~i~~~l~~g~~~~~A~~~ 144 (204)
|=..|-...+.-++..+.-|+++++|++.
T Consensus 93 GG~~i~~~~~q~l~n~ld~gm~~q~Ai~a 121 (188)
T 2qmc_B 93 GGSRIITTVLQVISNVIDYNMNISEAVSA 121 (188)
T ss_dssp CGGGHHHHHHHHHHHHHHHCCCHHHHHHS
T ss_pred CcchHHHHHHHHHHHHHccCCCHHHHhhC
Confidence 44445567778888999999999999864
No 13
>2nlz_A Cephalosporin acylase; structural genomics, protein structure initiative, PSI, nysgxrc; 2.70A {Bacillus halodurans} SCOP: d.153.1.6
Probab=79.27 E-value=8.5 Score=35.78 Aligned_cols=79 Identities=24% Similarity=0.269 Sum_probs=47.4
Q ss_pred CCCceeEEEEcCCCCEEEEecCCCCCCCccccccCCCCcCCceeeeC---------------------------------
Q psy5132 59 GVGTVGAVAVDARGHMVSCTSTGGITGKMKGRVGDTPIPGSGGYCDD--------------------------------- 105 (204)
Q Consensus 59 ~~dTVGaVa~D~~G~~AaatSTGG~~~K~~GRVGdspi~GaG~yAd~--------------------------------- 105 (204)
.+||+-..++|++||..+.|+|-...|- .|.+ ++|.|+.-+|
T Consensus 355 ~~~Tth~svvD~~GnaVS~t~Si~~~FG-Sgv~----~pgtGi~LNN~~~~Fs~~p~~~N~i~PgKRP~ssm~Ptiv~~~ 429 (547)
T 2nlz_A 355 RGGTVYLATADGDGNMVSFIQSNYMGFG-SGVV----VPGTGIAMQNRGHNFSLDPNHDNALKPGKRTYHTIIPGFLTKN 429 (547)
T ss_dssp ---CEEEEEEETTSCEEEEEEECSSTTC-SSCE----ETTTTEEBCCGGGGSBCCTTSTTBCCTTCCCCBCCCCEEEEES
T ss_pred CCCCEEEEEEcCCCCEEEEEccCCCccC-Ceee----cCCceEEeeCCCCCCCCCCCCCCcCCCCCccccCCCCeEEEeC
Confidence 4799999999999999999998543331 0111 1222222221
Q ss_pred -C-eeEEEecCchhHHHHHHHHHHHHHHHHcCCCHHHHHHH
Q psy5132 106 -N-IASVSTTGHGDSILRYCVAHRILHYIEQGLSATEASQK 144 (204)
Q Consensus 106 -~-~~a~s~TG~GE~iir~~lA~~i~~~l~~g~~~~~A~~~ 144 (204)
+ ..++.+. =|..| -...+.-++..+..|+++++|++.
T Consensus 430 g~~~l~~Gs~-GG~~i-~~~~~qvl~n~ld~gm~~q~Ai~a 468 (547)
T 2nlz_A 430 DQPIGPFGVM-GGFMQ-PQGHMQVMMNTIDFGLNPQAALDA 468 (547)
T ss_dssp SCEEEEEEEC-SGGGH-HHHHHHHHHHHHTTCCCHHHHHHS
T ss_pred CceEEEEECC-chHHH-HHHHHHHHHHHHhcCCCHHHHHhC
Confidence 1 1222222 24444 466778888999899999999863
No 14
>2e0w_A Gamma-glutamyltranspeptidase; NTN hydrolase, precursor, gamma-GTP, post-translational PROC maturation, transferase; 2.55A {Escherichia coli K12} SCOP: d.153.1.6
Probab=78.67 E-value=10 Score=35.33 Aligned_cols=85 Identities=21% Similarity=0.238 Sum_probs=47.4
Q ss_pred CCCceeEEEEcCCCCEEEEecCCCC-----------CCCccccccC-CCCcCCc-----------ee-------------
Q psy5132 59 GVGTVGAVAVDARGHMVSCTSTGGI-----------TGKMKGRVGD-TPIPGSG-----------GY------------- 102 (204)
Q Consensus 59 ~~dTVGaVa~D~~G~~AaatSTGG~-----------~~K~~GRVGd-spi~GaG-----------~y------------- 102 (204)
.+||+-..++|++||..+.|+|=.. .+-+--|..| +..||.= +.
T Consensus 364 ~~~Tth~svvD~~GnaVS~t~Si~~~FGSgv~~p~tGi~lNN~~~dFs~~pg~~n~~gl~~~~~N~i~PgKRP~ssm~Pt 443 (556)
T 2e0w_A 364 SNQATHYSVVDKDGNAVAVTYTLNTTFGTGIVAGESGILLNNQMDDFSAKPGVPNVYGLVGGDANAVGPNKRPLSSMSPT 443 (556)
T ss_dssp CSCCEEEEEECTTCCEEEEEEECSSTTTTSCBCGGGCCBCCCCC---------------------------CCCBCCCCE
T ss_pred CCCCEEEEEEcCCCCEEEEeccCCCCcCCeEEcCCCceEecCCCCCcCCCCCCCccccCCCCcccccCCCCCccccCCCe
Confidence 4799999999999999999988221 1122223333 2233321 00
Q ss_pred ---eeCCeeEEEecCchhHHHHHHHHHHHHHHHHcCCCHHHHHHH
Q psy5132 103 ---CDDNIASVSTTGHGDSILRYCVAHRILHYIEQGLSATEASQK 144 (204)
Q Consensus 103 ---Ad~~~~a~s~TG~GE~iir~~lA~~i~~~l~~g~~~~~A~~~ 144 (204)
.+.+...+--|-=|.. |-...+..++..+..|+++++|++.
T Consensus 444 iv~~~g~~~l~~Gs~GG~~-i~~~~~q~l~n~ld~gm~~q~Ai~a 487 (556)
T 2e0w_A 444 IVVKDGKTWLVTGSPGGSR-IITTVLQMVVNSIDYGLNVAEATNA 487 (556)
T ss_dssp EEEETTEEEEEECCCSTTH-HHHHHHHHHHHHHTSCCCHHHHHHS
T ss_pred EEEeCCcEEEEEECCChHH-HHHHHHHHHHHHHhcCCCHHHHHhc
Confidence 1111111222222444 4567778888999999999999864
No 15
>3g9k_S Capsule biosynthesis protein CAPD; CAPD protein, the great lakes regional C excellence, GLRCE, capsule biogenesis/degradation; HET: GLU; 1.79A {Bacillus anthracis} PDB: 3ga9_S*
Probab=78.64 E-value=22 Score=28.05 Aligned_cols=77 Identities=17% Similarity=0.145 Sum_probs=45.8
Q ss_pred ceeEEEEcCCCCEEEEecCCCCCCC---------ccccccC-------------------CCCcCCceeeeCCeeEEEec
Q psy5132 62 TVGAVAVDARGHMVSCTSTGGITGK---------MKGRVGD-------------------TPIPGSGGYCDDNIASVSTT 113 (204)
Q Consensus 62 TVGaVa~D~~G~~AaatSTGG~~~K---------~~GRVGd-------------------spi~GaG~yAd~~~~a~s~T 113 (204)
|+-..++|++||..+.|+|-...|- +--|-.| +|.+ ..-+++..++. +
T Consensus 1 Tth~svvD~~GnaVS~T~Si~~~FGSgv~~tGi~LNN~m~dFsp~~~N~i~PgKRP~ssm~Pti---v~~~g~~l~~G-s 76 (177)
T 3g9k_S 1 TTHFVIIDRDGTVVSSTNTLSNFFGTGKYTAGFFLNNQLQNFGSEGFNSYEPGKRSRTFMAPTV---LKKDGETIGIG-S 76 (177)
T ss_dssp CEEEEEECTTCCEEEEEEECSSTTTTSCEETTEECCCCCCC----------CCCCCCCCCCCEE---EEETTEEEEEE-C
T ss_pred CeEEEEECCCCCEEEEEccCCCCCCcceEecceEEcCcccccCCCCCcccCCCCccccCCCCEE---EEcCCcEEEEE-C
Confidence 6677899999999999998654321 1111111 1111 01122222222 2
Q ss_pred CchhHHHHHHHHHHHHHHHHcCCCHHHHHH
Q psy5132 114 GHGDSILRYCVAHRILHYIEQGLSATEASQ 143 (204)
Q Consensus 114 G~GE~iir~~lA~~i~~~l~~g~~~~~A~~ 143 (204)
-=|.. |-...+.-++..+..|+++++|++
T Consensus 77 ~GG~~-i~~~~~q~l~n~ld~gm~~q~Ai~ 105 (177)
T 3g9k_S 77 PGGNR-IPQILTPILDKYTHGKGSLQDIIN 105 (177)
T ss_dssp CCGGG-HHHHHHHHHHHHHTTCSCHHHHHH
T ss_pred CCHHH-HHHHHHHHHHHHHhCCCCHHHHHh
Confidence 22444 455778888899999999999985
No 16
>2dg5_B Gamma-glutamyltranspeptidase; gamma-glutamyltransferase, GGT, gamma-GT, glutathione; HET: GLU; 1.60A {Escherichia coli K12} SCOP: d.153.1.6 PDB: 2dbu_B 2dbw_B* 2dbx_B* 2e0x_B 2e0y_B 2z8i_B* 2z8j_B* 2z8k_B*
Probab=78.31 E-value=12 Score=29.98 Aligned_cols=28 Identities=29% Similarity=0.441 Sum_probs=21.9
Q ss_pred hhHHHHHHHHHHHHHHHHcCCCHHHHHHH
Q psy5132 116 GDSILRYCVAHRILHYIEQGLSATEASQK 144 (204)
Q Consensus 116 GE~iir~~lA~~i~~~l~~g~~~~~A~~~ 144 (204)
|..| -...+.-++..+..|+++++|++.
T Consensus 94 G~~i-~~~~~q~l~n~ld~gm~~q~Ai~a 121 (190)
T 2dg5_B 94 GSRI-ITTVLQMVVNSIDYGLNVAEATNA 121 (190)
T ss_dssp GGGH-HHHHHHHHHHHHTSCCCHHHHHHS
T ss_pred cchH-HHHHHHHHHHHHccCCCHHHHhhC
Confidence 4555 456788888999999999999864
No 17
>2v36_B Gamma-glutamyltranspeptidase small chain; transferase, glutathione biosynthesis, gamma-glutamyl transferase, acyltransferase, zymogen; 1.85A {Bacillus subtilis} PDB: 3a75_B*
Probab=76.15 E-value=25 Score=28.19 Aligned_cols=28 Identities=25% Similarity=0.296 Sum_probs=21.7
Q ss_pred hHHHHHHHHHHHHHHHHcCCCHHHHHHH
Q psy5132 117 DSILRYCVAHRILHYIEQGLSATEASQK 144 (204)
Q Consensus 117 E~iir~~lA~~i~~~l~~g~~~~~A~~~ 144 (204)
=..|-...+.-++..+.-|+++++|++.
T Consensus 84 G~~i~~~~~q~l~n~ld~gm~~q~Ai~a 111 (193)
T 2v36_B 84 GATIISSVLQTILYHIEYGMELKAAVEE 111 (193)
T ss_dssp GGGHHHHHHHHHHHHHTSCCCHHHHHHS
T ss_pred cchhHHHHHHHHHHHHccCCCHHHHhhC
Confidence 3444566778888999999999999864
No 18
>4gdv_A L-asparaginase; NTN enzyme, homodimer, hydrolase, L-asparagine; 1.75A {Homo sapiens} PDB: 4gdu_A 4gdt_A 4gdw_A
Probab=70.52 E-value=2.8 Score=36.42 Aligned_cols=43 Identities=21% Similarity=0.175 Sum_probs=30.5
Q ss_pred CCceeEEEEcCCCCEEEEecCCCCCCCccccccCCCCcCCceeeeCC
Q psy5132 60 VGTVGAVAVDARGHMVSCTSTGGITGKMKGRVGDTPIPGSGGYCDDN 106 (204)
Q Consensus 60 ~dTVGaVa~D~~G~~AaatSTGG~~~K~~GRVGdspi~GaG~yAd~~ 106 (204)
.++.|+|++|.+|+++++.+|.|+..-.. +-|. +=.|.|.|+.
T Consensus 262 ~g~gG~Iavd~~G~~~~~~nt~gM~~a~~-~~G~---~~~~i~~~~~ 304 (310)
T 4gdv_A 262 KGLGGLIVVSKTGDWVAKWTSTSMPWAAA-KDGK---LHFGIDPDDT 304 (310)
T ss_dssp CCCEEEEEEETTSCEEEEESSSBCCEEEE-ETTE---EEEESSTTCC
T ss_pred CCcEEEEEEeCCCCEEEEECCCCceEEEE-ECCE---EEEeECCCcc
Confidence 47899999999999999999999865443 2221 1235666554
No 19
>2i3o_A Gamma-glutamyltransferase related protein; structural genomics, PSI, protein structure initiative; 2.03A {Thermoplasma acidophilum} SCOP: d.153.1.6
Probab=62.43 E-value=28 Score=31.97 Aligned_cols=84 Identities=14% Similarity=0.051 Sum_probs=48.9
Q ss_pred CCCceeEEEEcCCCCEEEEecCCCCCC-----------CccccccC-CCCcCCce-----------------eeeCC-ee
Q psy5132 59 GVGTVGAVAVDARGHMVSCTSTGGITG-----------KMKGRVGD-TPIPGSGG-----------------YCDDN-IA 108 (204)
Q Consensus 59 ~~dTVGaVa~D~~G~~AaatSTGG~~~-----------K~~GRVGd-spi~GaG~-----------------yAd~~-~~ 108 (204)
.+||+-..++|++||..+.|+|-...| -+--|..| +..||.=. ..+.+ ..
T Consensus 328 ~~~Tth~svvD~~GnaVS~t~Si~~~FGSgv~~p~tGi~lnN~~~~Fs~~p~~~N~i~PgKRP~ssm~Ptiv~~~g~~~l 407 (516)
T 2i3o_A 328 IGDTTYFSISDSEGRSVSIIQSNYMGFGSGIVPKGTGFVLQNRGSYFTLQRDHPNALMPGKRTFHTLAACMVEKEHDLYA 407 (516)
T ss_dssp CCEEEEEEEEETTSCEEEEEEEEESTTCSSCCCTTSCCCCCCGGGGSBCCTTSTTBCCTTCCCCBCCCCEEEEETTEEEE
T ss_pred CCCCEEEEEEcCCCCEEEEeccCCCCcCCeeeeCCCceEEeCCCCccCCCCCCCCcCCCCCCcccCCCCeEEEeCCceEE
Confidence 479999999999999999998832221 11122222 11111100 01111 22
Q ss_pred EEEecCchhHHHHHHHHHHHHHHHHcCCCHHHHHHH
Q psy5132 109 SVSTTGHGDSILRYCVAHRILHYIEQGLSATEASQK 144 (204)
Q Consensus 109 a~s~TG~GE~iir~~lA~~i~~~l~~g~~~~~A~~~ 144 (204)
++.+. =|..| -...+.-++..+..|+++++|++.
T Consensus 408 ~~Gs~-GG~~i-~~~~~q~l~n~ld~gm~~q~Ai~a 441 (516)
T 2i3o_A 408 SLGSM-GGDIQ-PQVQMQILMEILKDNTDPQAILDK 441 (516)
T ss_dssp EEEEC-CSTTH-HHHHHHHHHHHTTCCSCHHHHHHS
T ss_pred EEECC-CcHHH-HHHHHHHHHHHHhcCCCHHHHHhC
Confidence 22222 24444 466778888889899999999864
No 20
>2gez_B L-asparaginase beta subunit; isoaspartyl aminopeptidase, NTN-hydrolase, autoproteolysis, taspase, sodium binding, hydrolase; 2.60A {Lupinus luteus}
Probab=60.62 E-value=4.7 Score=30.72 Aligned_cols=25 Identities=16% Similarity=0.248 Sum_probs=21.9
Q ss_pred ceeeEEecCCCcEEEEEcCCCCeeE
Q psy5132 156 TAGAITVTKCGKVGVYFNSPKMAWA 180 (204)
Q Consensus 156 ~~GvI~v~~~G~~~~a~~t~~m~~a 180 (204)
+.|+|+||.+|+++.+.+|-++.+=
T Consensus 1 TVGaValD~~G~iAaatSTgG~~~K 25 (133)
T 2gez_B 1 TVGCVAVDSHGNLASATSTGGLVNK 25 (133)
T ss_dssp CEEEEEECTTCCEEEEEEECCSTTB
T ss_pred CEEEEEEeCCCCEEEEECCCCcCCC
Confidence 3699999999999999999988653
No 21
>1k2x_B Putative L-asparaginase; NTN hydrolase, asparginase, autoproteolysis, hydrolase; HET: CME; 1.65A {Escherichia coli} SCOP: d.153.1.5 PDB: 1jn9_B* 1t3m_B 2zal_B
Probab=60.11 E-value=4.8 Score=31.06 Aligned_cols=25 Identities=20% Similarity=0.239 Sum_probs=21.9
Q ss_pred ceeeEEecCCCcEEEEEcCCCCeeE
Q psy5132 156 TAGAITVTKCGKVGVYFNSPKMAWA 180 (204)
Q Consensus 156 ~~GvI~v~~~G~~~~a~~t~~m~~a 180 (204)
+.|+|+||.+|+++.+.+|-++.+=
T Consensus 1 TVGaValD~~G~iAaaTSTgG~~~K 25 (143)
T 1k2x_B 1 TVGAVALDLDGNLAAATSTGGMTNK 25 (143)
T ss_dssp CEEEEEECTTSCEEEEEEECCCTTB
T ss_pred CeEEEEEeCCCCEEEEECCCCcCCC
Confidence 3699999999999999999988653
No 22
>1p4k_A N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase; alpha beta, beta alpha, sandwich, hydrolase; 1.90A {Elizabethkingia meningoseptica} SCOP: d.153.1.5 PDB: 1p4v_A 9gaa_A 9gaf_A 9gac_A 3ljq_A 2gl9_A* 1ayy_A 2gaw_A 2gac_A* 2gaw_B 1ayy_B 2gl9_B* 2gac_B*
Probab=57.29 E-value=7.6 Score=33.41 Aligned_cols=27 Identities=19% Similarity=0.206 Sum_probs=23.5
Q ss_pred CCceeEEEEcCCCCEEEEecCCCCCCC
Q psy5132 60 VGTVGAVAVDARGHMVSCTSTGGITGK 86 (204)
Q Consensus 60 ~dTVGaVa~D~~G~~AaatSTGG~~~K 86 (204)
..++|.|++|.+|+++++.+|.++.+-
T Consensus 252 ~~~gG~Iavd~~G~~~~~~nt~~m~~~ 278 (295)
T 1p4k_A 252 DIQVGFIALNKKGEYGAYCIQDGFNFA 278 (295)
T ss_dssp GCCEEEEEEETTSCEEEEESSTTCCEE
T ss_pred CceEEEEEEcCCCCEEEEecCCCceEE
Confidence 478999999999999999999876643
No 23
>1apy_B Aspartylglucosaminidase; glycosylasparaginase, hydrolase; HET: NAG BMA; 2.00A {Homo sapiens} SCOP: d.153.1.5 PDB: 1apz_B*
Probab=56.92 E-value=5.9 Score=30.51 Aligned_cols=24 Identities=17% Similarity=0.376 Sum_probs=21.4
Q ss_pred ceeeEEecCCCcEEEEEcCCCCee
Q psy5132 156 TAGAITVTKCGKVGVYFNSPKMAW 179 (204)
Q Consensus 156 ~~GvI~v~~~G~~~~a~~t~~m~~ 179 (204)
+.|+|++|.+|+++.+.+|-++.+
T Consensus 1 TVGaValD~~G~lAaaTSTGG~~~ 24 (141)
T 1apy_B 1 TIGMVVIHKTGHIAAGTSTNGIKF 24 (141)
T ss_dssp CEEEEEECTTSCEEEEEEECCSTT
T ss_pred CEEEEEEeCCCCEEEEECCCCcCC
Confidence 369999999999999999998865
No 24
>3c17_A L-asparaginase precursor; isoaspartyl peptidase, NTN-hydrolase, autoprot precursor, hydrolase; 1.95A {Escherichia coli} PDB: 2zak_A
Probab=45.88 E-value=11 Score=32.82 Aligned_cols=25 Identities=16% Similarity=0.205 Sum_probs=23.0
Q ss_pred CceeeEEecCCCcEEEEEcCCCCee
Q psy5132 155 KTAGAITVTKCGKVGVYFNSPKMAW 179 (204)
Q Consensus 155 ~~~GvI~v~~~G~~~~a~~t~~m~~ 179 (204)
++.|+|+||.+|+++.+.+|-+|.+
T Consensus 177 dTVGaValD~~G~lAaaTSTGG~~~ 201 (320)
T 3c17_A 177 GAVGAVALDLDGNLAAATSTGGMTN 201 (320)
T ss_dssp CCEEEEEECTTSCEEEEEEECCCTT
T ss_pred CCEEEEEEeCCCCEEEEEcCCCcCC
Confidence 5799999999999999999998875
No 25
>2a8j_A Taspase 1, threonine aspartase 1; MLL, glycosylspraginase, asparaginase, hydrolase; 1.90A {Homo sapiens} PDB: 2a8i_A 2a8m_A 2a8l_A
Probab=37.92 E-value=15 Score=33.10 Aligned_cols=25 Identities=32% Similarity=0.407 Sum_probs=22.2
Q ss_pred CceeeEEecCCCcEEEEEcCCCCee
Q psy5132 155 KTAGAITVTKCGKVGVYFNSPKMAW 179 (204)
Q Consensus 155 ~~~GvI~v~~~G~~~~a~~t~~m~~ 179 (204)
++.|+|+||.+|+++.+.+|-+|.+
T Consensus 233 dTVGaVAlD~~G~lAAaTSTGG~~~ 257 (420)
T 2a8j_A 233 DTVGAVVVDHEGNVAAAVSSGGLAL 257 (420)
T ss_dssp -CEEEEEEETTCCEEEEEEECCSTT
T ss_pred CCEEEEEEeCCCCEEEEEcCCCCcC
Confidence 6799999999999999999998865
No 26
>3msh_A Hepatitis B virus X-interacting protein; alpha-beta proteins, profilin-like fold, roadblock/LC7 domai superfamily, protein binding; HET: PG4; 1.51A {Homo sapiens} PDB: 3ms6_A*
Probab=36.23 E-value=26 Score=25.29 Aligned_cols=14 Identities=29% Similarity=0.589 Sum_probs=13.0
Q ss_pred CCCceeEEEEcCCC
Q psy5132 59 GVGTVGAVAVDARG 72 (204)
Q Consensus 59 ~~dTVGaVa~D~~G 72 (204)
..++||++|.|++|
T Consensus 15 ~pgvvGvlc~D~qG 28 (99)
T 3msh_A 15 NPSIVGVLCTDSQG 28 (99)
T ss_dssp STTEEEEEEECTTC
T ss_pred cCCcEEEEEECCCC
Confidence 57899999999999
No 27
>1m40_A TEM-1, beta-lactamase TEM; acylation mechanism, ultra- high resolution, hydrolase; HET: CB4; 0.85A {Escherichia coli} SCOP: e.3.1.1 PDB: 1jwp_A* 1nxy_A* 1ny0_A* 1nym_A* 1nyy_A* 1pzo_A* 1erm_A* 1ero_A* 1erq_A* 1s0w_A 1xpb_A 1li0_A 1htz_A 1jtd_A 1esu_A 1jwz_A* 1li9_A 1jwv_A* 1jtg_A 1axb_A* ...
Probab=34.78 E-value=74 Score=25.15 Aligned_cols=36 Identities=17% Similarity=0.311 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHcCCceeeEEec-CCCcEEEEEcCCC
Q psy5132 141 ASQKALDGMRTRVGKTAGAITVT-KCGKVGVYFNSPK 176 (204)
Q Consensus 141 A~~~~i~~~~~~~~~~~GvI~v~-~~G~~~~a~~t~~ 176 (204)
++++.|+++.+.+++..|++++| .+|++.+.+|...
T Consensus 3 ~l~~~l~~~~~~~~~~~~~~v~d~~tG~~l~~~~~~~ 39 (263)
T 1m40_A 3 ETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEE 39 (263)
T ss_dssp HHHHHHHHHHHHHTSEEEEEEEETTTCCEEEEESTTS
T ss_pred hHHHHHHHHHHhcCCeEEEEEEECCCCCEeeeeCCCC
Confidence 45666777777777888999998 5799887887653
No 28
>1ryp_I 20S proteasome; multicatalytic proteinase, protein degradation, antigen processing, hydrolase, protease; 1.90A {Saccharomyces cerevisiae} SCOP: d.153.1.4 PDB: 1g0u_H* 1jd2_H* 1g65_H 1vsy_I 1z7q_I 2f16_H* 2fak_H* 2fny_H* 2gpl_H* 3d29_H* 3dy3_H* 3dy4_H* 3e47_H* 3gpj_H* 3gpt_H* 3gpw_H* 3hye_H* 3l5q_M 3mg0_H* 3mg4_H* ...
Probab=29.34 E-value=2e+02 Score=22.57 Aligned_cols=61 Identities=16% Similarity=0.155 Sum_probs=38.1
Q ss_pred CceeeeCCeeEEEecCchhHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHc------CCceeeEEecCCC
Q psy5132 99 SGGYCDDNIASVSTTGHGDSILRYCVAHRILHYIEQGLSATEASQKALDGMRTRV------GKTAGAITVTKCG 166 (204)
Q Consensus 99 aG~yAd~~~~a~s~TG~GE~iir~~lA~~i~~~l~~g~~~~~A~~~~i~~~~~~~------~~~~GvI~v~~~G 166 (204)
.|.|-... ..+.|.|...++..|=+. .+..++.+||.+.+++-|...+ +...=|.+++++|
T Consensus 116 ~G~~~~~~---~~aiGsgs~~a~~~Le~~----~~~~ms~eeA~~la~~al~~~~~~d~~sg~~i~v~vi~~~g 182 (222)
T 1ryp_I 116 HGSTDVGY---YLSLGSGSLAAMAVLESH----WKQDLTKEEAIKLASDAIQAGIWNDLGSGSNVDVCVMEIGK 182 (222)
T ss_dssp TSCEEECS---EEEESTTHHHHHHHHHHH----CCSSCCHHHHHHHHHHHHHHHHHHCTTCCSCEEEEEEETTS
T ss_pred CCCEEecC---EEEECCCHHHHHHHHHhh----CCCCcCHHHHHHHHHHHHHHHHhccccCCCcEEEEEEECCC
Confidence 45565544 355799888766655433 3457899999888876665432 1223355677777
No 29
>1uwz_A Cytidine deaminase; CDD, tetramer, zinc binding, pyrimidine metabolism, salvage, hydrolase; HET: THU; 1.99A {Bacillus subtilis} SCOP: c.97.1.1 PDB: 1ux0_A* 1jtk_A* 1ux1_A*
Probab=27.97 E-value=1e+02 Score=22.89 Aligned_cols=38 Identities=32% Similarity=0.200 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHc---CC-ceeeEEecCCCcEEEEEcCCCCe
Q psy5132 141 ASQKALDGMRTRV---GK-TAGAITVTKCGKVGVYFNSPKMA 178 (204)
Q Consensus 141 A~~~~i~~~~~~~---~~-~~GvI~v~~~G~~~~a~~t~~m~ 178 (204)
-.+.+++...+.+ +. ..|.++++++|++..++|-+.-.
T Consensus 6 l~~~A~~aa~~ayapYs~~~VGAal~~~dG~i~~G~Nvena~ 47 (136)
T 1uwz_A 6 LITEALKARDMAYAPYSKFQVGAALLTKDGKVYRGCNIENAA 47 (136)
T ss_dssp HHHHHHHHHTTCBCTTTCCCEEEEEEETTSCEEEEECBCCSS
T ss_pred HHHHHHHHHHhccCccCCCCEEEEEEeCCCeEEEEeCcccCC
Confidence 3444444444433 23 38999999999999999988443
No 30
>3k2n_A Sigma-54-dependent transcriptional regulator; PSI-2, protein structure initiative, structural genomics; 2.50A {Chlorobium tepidum tls}
Probab=26.82 E-value=1.7e+02 Score=20.64 Aligned_cols=47 Identities=15% Similarity=0.033 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCce-eeEEecCCCcEE
Q psy5132 123 CVAHRILHYIEQGLSATEASQKALDGMRTRVGKTA-GAITVTKCGKVG 169 (204)
Q Consensus 123 ~lA~~i~~~l~~g~~~~~A~~~~i~~~~~~~~~~~-GvI~v~~~G~~~ 169 (204)
.+-++|...+....++++.++.+++.+.+.++... .|..+|.++...
T Consensus 6 ~ll~~i~~~l~~~~d~~~~l~~i~~~~~~~~~~~~~~i~l~d~~~~~l 53 (177)
T 3k2n_A 6 KLMQYIGDAIGTIRDPQELFRTVTDKLRLLFAFDSAVIITIDRERREA 53 (177)
T ss_dssp HHHHHHHHHHTTCCSHHHHHHHHHHHHTTTCCCSEEEEEEEETTTTEE
T ss_pred HHHHHHHHHHhcccCHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCCeE
Confidence 45567888888888999999999999988887664 455567766443
No 31
>3p01_A Two-component response regulator; PSI-2, midwest center for structural genomics, protein struc initiative, MCSG, signali protein; 2.65A {Nostoc SP}
Probab=24.19 E-value=1.8e+02 Score=21.09 Aligned_cols=46 Identities=4% Similarity=-0.010 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCceeeEEecCCCc
Q psy5132 122 YCVAHRILHYIEQGLSATEASQKALDGMRTRVGKTAGAITVTKCGK 167 (204)
Q Consensus 122 ~~lA~~i~~~l~~g~~~~~A~~~~i~~~~~~~~~~~GvI~v~~~G~ 167 (204)
..+-.+|...+....++++.++.+++.+.+.++...+.|.+-.+++
T Consensus 29 ~~~L~~is~~l~~~~dl~~il~~i~~~l~~~l~~d~~~i~l~~~~~ 74 (184)
T 3p01_A 29 MSLLTVLVQVTQASNSLEAILTPIATAFAESFAVNACILQMLEGQT 74 (184)
T ss_dssp HHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHTCSEEEEEEEETTE
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhCCCeEEEEEecCCc
Confidence 3455667777887889999999999999988887656555544444
No 32
>2kng_A Protein LSR2; DNA-binding domain, immune response, DNA binding protein; NMR {Mycobacterium tuberculosis}
Probab=24.04 E-value=1.1e+02 Score=19.64 Aligned_cols=31 Identities=19% Similarity=0.194 Sum_probs=22.5
Q ss_pred HHHHHHHHcCCCCCCCCCCCCHHHHHHHHHHH
Q psy5132 13 GANEFGRRMGLPQIPDSELITENAKHALEKFL 44 (204)
Q Consensus 13 gA~~fA~~~G~~~~~~~~l~T~~~~~~~~~~~ 44 (204)
-..+||+++|+++ ++---|..+-.+.|+...
T Consensus 17 aIR~WAr~nG~~V-sdRGRIp~~V~eAY~aA~ 47 (55)
T 2kng_A 17 AIREWARRNGHNV-STRGRIPADVIDAYHAAT 47 (55)
T ss_dssp HHHHHHHHTTCCC-CSSSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHcCCcC-CCCCCCCHHHHHHHHHcC
Confidence 3578999999987 445567777777776643
No 33
>1e25_A Extended-spectrum beta-lactamase PER-1; hydrolase, antibiotic resistance, class A cephalosporinase; 1.9A {Pseudomonas aeruginosa} SCOP: e.3.1.1
Probab=22.23 E-value=95 Score=24.78 Aligned_cols=35 Identities=9% Similarity=0.008 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHHHcCCceeeEEec-CCCcEEEEEcCC
Q psy5132 140 EASQKALDGMRTRVGKTAGAITVT-KCGKVGVYFNSP 175 (204)
Q Consensus 140 ~A~~~~i~~~~~~~~~~~GvI~v~-~~G~~~~a~~t~ 175 (204)
.++++.|+++.+.+++..|++++| .+|++ +++|..
T Consensus 3 ~~l~~~l~~~~~~~~~~~~v~v~d~~tg~~-~~~~~~ 38 (282)
T 1e25_A 3 PLLKEQIESIVIGKKATVGVAVWGPDDLEP-LLINPF 38 (282)
T ss_dssp HHHHHHHHHHHTTSSSEEEEEEECTTCSSC-EEESTT
T ss_pred hhHHHHHHHHHHhcCCeEEEEEEECCCCCE-EEECCC
Confidence 356677777777777788999998 46777 567654
No 34
>2hz5_A Dynein light chain 2A, cytoplasmic; DNLC2A, transport protein; 2.10A {Homo sapiens} SCOP: d.110.7.1 PDB: 2b95_A
Probab=21.82 E-value=58 Score=23.54 Aligned_cols=28 Identities=18% Similarity=0.239 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHHcCCceeeEEecCCCcEE
Q psy5132 141 ASQKALDGMRTRVGKTAGAITVTKCGKVG 169 (204)
Q Consensus 141 A~~~~i~~~~~~~~~~~GvI~v~~~G~~~ 169 (204)
.+++.++++.+. ++-.|+|++|++|.+.
T Consensus 13 evEe~l~RI~~~-kgV~G~iIln~~G~pI 40 (106)
T 2hz5_A 13 EVEETLKRLQSQ-KGVQGIIVVNTEGIPI 40 (106)
T ss_dssp --CHHHHHHHTS-TTEEEEEEECTTCCEE
T ss_pred HHHHHHHHHhcC-CCceEEEEEcCCCCeE
Confidence 457788888753 6789999999999665
No 35
>1n9b_A Penicillinase, beta-lactamase SHV-2; beta-lactam hydrolase, detergent binding, drug design, radiation damage; HET: MA4 EPE; 0.90A {Klebsiella pneumoniae} SCOP: e.3.1.1 PDB: 3d4f_A* 2zd8_A* 1q2p_A* 1shv_A* 1vm1_A* 2g2u_A 2h5s_A* 1ong_A* 3c4o_A 3c4p_A 3mke_A* 3mkf_A* 3mxr_A* 3mxs_A* 3n4i_A 2a3u_A* 3opr_A* 3opl_A* 3oph_A* 3opp_A* ...
Probab=20.62 E-value=1.7e+02 Score=23.07 Aligned_cols=33 Identities=9% Similarity=0.198 Sum_probs=23.4
Q ss_pred HHHHHHHHHHcCCceeeEEec-CCCcEEEEEcCC
Q psy5132 143 QKALDGMRTRVGKTAGAITVT-KCGKVGVYFNSP 175 (204)
Q Consensus 143 ~~~i~~~~~~~~~~~GvI~v~-~~G~~~~a~~t~ 175 (204)
++.|+++.+.+++..|++++| .+|++.+.+|..
T Consensus 5 ~~~l~~~~~~~~~~~~v~v~d~~tg~~l~~~~~~ 38 (265)
T 1n9b_A 5 LEQIKLSESQLSGRVGMIEMDLASGRTLTAWRAD 38 (265)
T ss_dssp HHHHHHHHHHHTSEEEEEEEETTTCCEEEEESTT
T ss_pred HHHHHHHHHhcCCcEEEEEEECCCCcEeeeeCCC
Confidence 344555555667788999998 478888777654
No 36
>3ub6_A Chemoreceptor TLPB; homodimer, four-helix bundle, PAS domain, membrane protein; 1.38A {Helicobacter pylori} PDB: 3ub7_A 3ub8_A 3ub9_A*
Probab=20.51 E-value=2.6e+02 Score=21.31 Aligned_cols=47 Identities=21% Similarity=0.159 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHH-HcCCcee-eEEecCCCcEE
Q psy5132 123 CVAHRILHYIEQGLSATEASQKALDGMRT-RVGKTAG-AITVTKCGKVG 169 (204)
Q Consensus 123 ~lA~~i~~~l~~g~~~~~A~~~~i~~~~~-~~~~~~G-vI~v~~~G~~~ 169 (204)
-+|..++..+.+.++.++|-+.+++.+.. +++...| +.++|.+|.+.
T Consensus 34 ~~a~~~i~~~~~~~~~~ea~~~a~~~l~~~r~g~~~gY~fv~d~~g~~l 82 (181)
T 3ub6_A 34 KILEQGIHEYYKSFDNDTARKMALDYFKRINDDKGMIYMVVVDKNGVVL 82 (181)
T ss_dssp HHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTCSSCEEEEECTTCBEE
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHhCccCCCCCEEEEEeCCCCEE
Confidence 35666666665556888887777766654 3554423 45667777654
No 37
>3qhy_A Beta-lactamase; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Bacillus anthracis}
Probab=20.43 E-value=91 Score=25.58 Aligned_cols=44 Identities=11% Similarity=0.273 Sum_probs=29.5
Q ss_pred CCHHHHHHHHHHHHHHHcCCceeeEEecC-CCcEEEEEcCC-CCeeE
Q psy5132 136 LSATEASQKALDGMRTRVGKTAGAITVTK-CGKVGVYFNSP-KMAWA 180 (204)
Q Consensus 136 ~~~~~A~~~~i~~~~~~~~~~~GvI~v~~-~G~~~~a~~t~-~m~~a 180 (204)
..+..++++.|+.+.+.+++..||.++|. +|++. .+|.. .|+.|
T Consensus 8 ~~~~~~l~~~l~~l~~~~~~~~gv~v~d~~tg~~l-~~n~d~~~~~A 53 (271)
T 3qhy_A 8 KHKNQATHKEFSQLEKKFDARLGVYAIDTGTNQTI-AYRPNERFAFA 53 (271)
T ss_dssp ------CHHHHHHHHHHHTCEEEEEEEETTTCCEE-EESTTCCEECG
T ss_pred CCchHHHHHHHHHHHHhcCCeEEEEEEECCCCCEE-EECCCCcccch
Confidence 45677888899999988899999999985 67776 67654 44443
No 38
>2wuq_A BLAB, beta-lactamase regulatory protein BLAB; class A beta-lactamase fold, transcription regulation, beta-lactamase induction, transcription; 1.80A {Streptomyces cacaoi}
Probab=20.37 E-value=1.1e+02 Score=24.89 Aligned_cols=33 Identities=12% Similarity=0.074 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHcCCceeeEEec-CCCcEEEEEcCC
Q psy5132 142 SQKALDGMRTRVGKTAGAITVT-KCGKVGVYFNSP 175 (204)
Q Consensus 142 ~~~~i~~~~~~~~~~~GvI~v~-~~G~~~~a~~t~ 175 (204)
+++.|+++.+..+..+|++++| ++|++ +++|..
T Consensus 7 l~~~l~~~~~~~~~~~~vvv~d~~tG~i-~a~~~~ 40 (318)
T 2wuq_A 7 LLRELRDALHEGGLTGSFLVRDLYTGEE-LGIDPD 40 (318)
T ss_dssp HHHHHHHHHHHTTEEEEEEEEETTTCCE-EEESTT
T ss_pred HHHHHHHHHHhcCCeEEEEEEECCCCCE-EEECCC
Confidence 4444555555566778899998 56888 677654
No 39
>1ctt_A Cytidine deaminase; hydrolase; HET: DHZ; 2.20A {Escherichia coli} SCOP: c.97.1.1 c.97.1.1 PDB: 1aln_A* 1af2_A* 1ctu_A*
Probab=20.29 E-value=3.2e+02 Score=23.01 Aligned_cols=43 Identities=19% Similarity=0.013 Sum_probs=31.3
Q ss_pred cCCCHHHHHHHHHHHHHHH-c---CCc-eeeEEecCCCcEEEEEcCCC
Q psy5132 134 QGLSATEASQKALDGMRTR-V---GKT-AGAITVTKCGKVGVYFNSPK 176 (204)
Q Consensus 134 ~g~~~~~A~~~~i~~~~~~-~---~~~-~GvI~v~~~G~~~~a~~t~~ 176 (204)
.|++.++-+..+.....++ + ..+ .|.++++++|++..++|-+.
T Consensus 45 ~~~~~~~ll~~~a~~a~~~AyaPyS~f~VGAall~~dG~i~~G~NvEn 92 (294)
T 1ctt_A 45 TGLDEDALAFALLPLAAACARTPLSNFNVGAIARGVSGTWYFGANMEF 92 (294)
T ss_dssp SCCCHHHHHHHHHHHHHHTCBCTTTCCCCEEEEEETTSCEEEEECBCC
T ss_pred cCCCHHHHHHHHHHHHHHhccCccCCCcEEEEEEeCCCCEEEEEcCCc
Confidence 5778777666666555442 2 233 89999999999999999874
No 40
>3cpt_A Mitogen-activated protein kinase kinase 1- interacting protein 1; scaffold, complex, alpha/beta, endosome, membrane, lysosome; 1.90A {Homo sapiens} SCOP: d.110.7.1 PDB: 1sko_A 2zl1_A 1vet_A 1veu_A
Probab=20.23 E-value=1.4e+02 Score=22.84 Aligned_cols=38 Identities=8% Similarity=0.016 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHHHHcCCceeeEEecCCCcEEEEEcCCC
Q psy5132 139 TEASQKALDGMRTRVGKTAGAITVTKCGKVGVYFNSPK 176 (204)
Q Consensus 139 ~~A~~~~i~~~~~~~~~~~GvI~v~~~G~~~~a~~t~~ 176 (204)
.+.+++-+.++.++++|--+|++-|++|-+.+.-+.+.
T Consensus 21 ~~~Lq~~L~~ll~rv~Gl~aI~ItDrDGVpi~kv~~~~ 58 (143)
T 3cpt_A 21 ADDLKRFLYKKLPSVEGLHAIVVSDRDGVPVIKVANDN 58 (143)
T ss_dssp -CHHHHHHHHHGGGSTTEEEEEEECTTSCEEEEEECTT
T ss_pred HHHHHHHHHHHHhccCCeEEEEEECCCCcEEEEecCCC
Confidence 35677888888888888888999999997776555444
Done!