BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5134
(648 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8WTC1|RT15_DROME 28S ribosomal protein S15, mitochondrial OS=Drosophila melanogaster
GN=bonsai PE=2 SV=2
Length = 280
Score = 144 bits (364), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 94/250 (37%), Positives = 141/250 (56%), Gaps = 3/250 (1%)
Query: 390 GYKQLIKIKWKRPEPVAFNDPRKSGDQILELGPLELDKPTLEYAKCESLKSADEHVKKIF 449
+K +KIKW RPE +A P KSGD + +L PL+ D+ EY C+ L ADE VK +F
Sbjct: 20 AFKSDLKIKWMRPEKIACYKPEKSGD-LAKLPPLKADELLPEYRDCKELDKADESVKSLF 78
Query: 450 SCAHRGRKQAVELVKKKHVDSVKRHDLDDTSREVLITKYTVSIRSLQEHHKAKPLDKRAK 509
++ + + + V V+RH D S E + K T IR QEH P DK K
Sbjct: 79 KLSNNASYLTTKFYRDEMVKEVQRHAQDFGSMEAKLAKMTAVIRRYQEHMDKHPRDKMIK 138
Query: 510 VWLKELIDKRNKHLRLLRTENYKVFEWLLDELKIVFRPGPTILNKVHRKESLRFLVDKHI 569
V LKELIDKR K L+ LR +Y FEW+L++L +V++P PT + + RKESL+ L D +
Sbjct: 139 VRLKELIDKRKKFLKYLRRWDYPRFEWILEKLDLVYKPPPTHFHWITRKESLQKLTDIYC 198
Query: 570 GDVKTERLTQLRNKFNQEKINFYKKKAEFLEWTMEQEKKYGKEPTVTKEEIESIWKKYEE 629
++K ERL + ++I F ++ + +++ +++ TVT+E+I ++ E
Sbjct: 199 ENLKEERLEAYHKQLQAQQIPFLEEAIKKMQFVRQEQISCDVPVTVTEEKIADSKRQLEM 258
Query: 630 LAEKELEQYE 639
L KEL+Q E
Sbjct: 259 L--KELQQAE 266
>sp|Q9UH36|SRR1L_HUMAN SRR1-like protein OS=Homo sapiens GN=SRRD PE=2 SV=1
Length = 339
Score = 121 bits (304), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 107/186 (57%), Gaps = 8/186 (4%)
Query: 182 QIICYGIGNFTDSIAAKYQFVLLLLLKIEYDCEI-----LIYDPIFNELELELIEIFKLE 236
+ +CYGIGNF I A+ Q L LL + C+I +YDP+F++LE+E++ +
Sbjct: 140 KCVCYGIGNFATCIVARNQ--LTFLLLLLEKCQIPRSHCWVYDPLFSQLEIEVLNTLGVT 197
Query: 237 LIIQNEECKHTITHAKTLVYMPRCPIQLINNILYSNWTRENLSNLILLSNSISTVVDSNT 296
++ +NEE K +I T+ YM C L NN+L+SNW+ + LS ++++ NS + +
Sbjct: 198 VLSENEEGKRSIRGEPTIFYMLHCGTALYNNLLWSNWSVDALSKMVIIGNSFKGLEERLL 257
Query: 297 DAFLKSNLQFLFHIKEFLEEVPVVNNFKFNDIFNDTSLHCFLPTKLNSIEQDIWDLRFLE 356
L+ N ++ I + LEE+ ++ DIFNDTS+H F KL + DIW+ R E
Sbjct: 258 ARILQKNYPYIAKILKGLEELEFPQTSQYMDIFNDTSVHWFPVQKLEQLSIDIWEFR-EE 316
Query: 357 PEYTEC 362
P+Y +C
Sbjct: 317 PDYQDC 322
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 33/51 (64%)
Query: 6 MTQNEECKHTITHAKTLVYMPRCPIQLINNILYSNWTRENLSNLILLSNSI 56
+++NEE K +I T+ YM C L NN+L+SNW+ + LS ++++ NS
Sbjct: 199 LSENEEGKRSIRGEPTIFYMLHCGTALYNNLLWSNWSVDALSKMVIIGNSF 249
>sp|Q9VEB5|SRR1L_DROME SRR1-like protein OS=Drosophila melanogaster GN=CG7988 PE=1 SV=1
Length = 276
Score = 107 bits (268), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 112/212 (52%), Gaps = 17/212 (8%)
Query: 143 RIESVKEELGSSDYYLQLINLISKSLNLSSANSTTQGINQIICYGIGNFTDSIAAKYQFV 202
R+E++ E+ SDY+L + + + L + + +I+C G+G F+ + A +Q
Sbjct: 49 RLENLCTEMCQSDYFLVAMEALQQQLE-----GIRKPLERIVCLGLGPFSRTYHALHQAA 103
Query: 203 LLLLLKIEYDC-EILIYDPIFNELELELIEIFKLELIIQNEECKHTITHAKTLVYMPRCP 261
++ L + E L +DP+F + E ELI +F ++ ++ KH T TL Y+P CP
Sbjct: 104 FVIGLHRHHKIREALYFDPVFRDSEKELIRLFDGCIMSKDCAGKHEAT-VPTLYYLPHCP 162
Query: 262 IQLINNILYSNWTRENLSNLILLSNSIS--TVVDSNTDAFLKSNLQFLFHIKEFLEEVPV 319
L++NIL+SNW RE L N+ L+SNS T+ N D + I E E P+
Sbjct: 163 YALMHNILWSNWKRETLPNVFLISNSFEMLTMTPRNQDDHITR-------IVEHCTETPL 215
Query: 320 VNNFKFNDIFNDTSLHCFLPTKL-NSIEQDIW 350
++++ +++FND SLH F L S ++ W
Sbjct: 216 EDDYEHHNVFNDLSLHTFPQESLPGSNDEAFW 247
Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
Query: 6 MTQNEECKHTITHAKTLVYMPRCPIQLINNILYSNWTRENLSNLILLSNSIS--TVVDSN 63
M+++ KH T TL Y+P CP L++NIL+SNW RE L N+ L+SNS T+ N
Sbjct: 140 MSKDCAGKHEAT-VPTLYYLPHCPYALMHNILWSNWKRETLPNVFLISNSFEMLTMTPRN 198
Query: 64 TD 65
D
Sbjct: 199 QD 200
>sp|Q8K2M3|SRR1L_MOUSE SRR1-like protein OS=Mus musculus GN=Srrd PE=2 SV=4
Length = 249
Score = 84.3 bits (207), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 99/202 (49%), Gaps = 28/202 (13%)
Query: 139 SIFRRIESVKEELGSSDYYLQLINLISKSL---------------------NLSSAN--- 174
++ RR+ +E+L SD+ + I++ L +L SA+
Sbjct: 41 AVLRRLREAEEDLRISDFCSSALETITECLRKQLEQLQPLTEALGRLHLGSSLPSASQEP 100
Query: 175 -STTQGINQIICYGIGNFTDSIAAKYQ--FVLLLLLKIEYD-CEILIYDPIFNELELELI 230
+++ + +CYG+G F A+ Q F+LL L K + +YDP+F++ E+ ++
Sbjct: 101 LASSASHVKCVCYGLGTFASCPTARIQLAFMLLFLEKCQVPRSHCWVYDPLFSQTEVSVL 160
Query: 231 EIFKLELIIQNEECKHTITHAKTLVYMPRCPIQLINNILYSNWTRENLSNLILLSNSIST 290
+ ++ +NEE K ++ T+ YMP C L NN+L+SNW+ + LS ++++ NS
Sbjct: 161 TSLGVTVLSENEEGKRSVQGQPTVFYMPHCGTALYNNLLWSNWSADALSRVLIIGNSFRG 220
Query: 291 VVDSNTDAFLKSNLQFLFHIKE 312
+ + L+ N ++ + +
Sbjct: 221 LEERLLARILQENYPYIAKVSD 242
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 34/51 (66%)
Query: 6 MTQNEECKHTITHAKTLVYMPRCPIQLINNILYSNWTRENLSNLILLSNSI 56
+++NEE K ++ T+ YMP C L NN+L+SNW+ + LS ++++ NS
Sbjct: 168 LSENEEGKRSVQGQPTVFYMPHCGTALYNNLLWSNWSADALSRVLIIGNSF 218
>sp|Q6DGL8|RT15_DANRE 28S ribosomal protein S15, mitochondrial OS=Danio rerio GN=mrps15
PE=2 SV=1
Length = 263
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 64/128 (50%)
Query: 431 EYAKCESLKSADEHVKKIFSCAHRGRKQAVELVKKKHVDSVKRHDLDDTSREVLITKYTV 490
EYA +S D+ VKK+ + + + L +++ + V+R + D +S EV + T
Sbjct: 89 EYASVPLAQSVDDVVKKLLTLEFANHSEKLRLKEEQLIAKVQRDENDRSSTEVKVAILTA 148
Query: 491 SIRSLQEHHKAKPLDKRAKVWLKELIDKRNKHLRLLRTENYKVFEWLLDELKIVFRPGPT 550
IR+ QEH P DK K W+ IDKR K L+ LR Y FE + EL I + P
Sbjct: 149 RIRNFQEHLHKHPKDKANKRWMLMTIDKRKKLLKFLRRTRYDSFEKVCKELGITYTFPPE 208
Query: 551 ILNKVHRK 558
+V R+
Sbjct: 209 YYRRVTRR 216
>sp|Q8GWZ6|SRR1_ARATH Protein SENSITIVITY TO RED LIGHT REDUCED 1 OS=Arabidopsis thaliana
GN=SRR1 PE=2 SV=2
Length = 275
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 57/110 (51%), Gaps = 4/110 (3%)
Query: 182 QIICYGIGNFTDSIAAKYQFVLLLLLKIEYDC---EILIYDPIFNELELELIEIFKLELI 238
Q++ YGIG+ + ++Q + +L+K E+D I ++DP+ + E +E ++
Sbjct: 102 QMVMYGIGSIESYESPRFQLSIAILMKREFDWVGDNIEVFDPVLSATESSYLESLGCSVL 161
Query: 239 IQNEECKHTITHAKTLVYMPRCPIQLINNILYSNWTRENLSNLILLSNSI 288
NE+ + TL +MP C L +N+L +NW + LS + L NS
Sbjct: 162 SVNEQARREALKP-TLFFMPHCEANLYSNLLQANWRMDRLSKIALFGNSF 210
Score = 38.5 bits (88), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 21 TLVYMPRCPIQLINNILYSNWTRENLSNLILLSNSISTVVDS-NTDALCILALANVV 76
TL +MP C L +N+L +NW + LS + L NS + + DA I A ++
Sbjct: 175 TLFFMPHCEANLYSNLLQANWRMDRLSKIALFGNSFQMYEEQVSFDAEVICATKRII 231
>sp|Q9NAP9|RT15_CAEEL 28S ribosomal protein S15, mitochondrial OS=Caenorhabditis elegans
GN=K07A12.7 PE=3 SV=1
Length = 330
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 87/179 (48%), Gaps = 17/179 (9%)
Query: 420 LGPLELDKPTLEYAKCESLKSADEHVKKIFSCAHRGRKQAVELVKKKHVDSVKRHDLDDT 479
L +E K +Y + L +A E VKKIFS RK+ + K+ + SV++H LD+
Sbjct: 87 LPRIEKSKTRAKYEDLDVLSNAPESVKKIFSVEMATRKELSQEWKQSLIKSVRQHSLDEN 146
Query: 480 SREVLITKYTVSIR-------SLQEHHKAKPLDKRAKVWLKELIDKRNKHLRLLRTENYK 532
S E+ I T IR + + K KP ++WL +I++R K LR+LR N
Sbjct: 147 SLEMKIAWLTALIRHWSLLVNDIGQETKKKPTWLTHRIWL--VINERRKALRILRERNET 204
Query: 533 VFEWLLDELKIVF----RPGPTILNKVHRKESLRFLVDKHIGDVKTERLTQLRNKFNQE 587
FE + LKI + +P K + L+ V+ + K +RL +L K+++E
Sbjct: 205 AFEKTIAALKISYHVPKQPAHVKTRKAWAEAQLKLRVE----NEKEKRLEELHEKYDKE 259
>sp|Q5XI37|RT15_RAT 28S ribosomal protein S15, mitochondrial OS=Rattus norvegicus
GN=Mrps15 PE=2 SV=1
Length = 257
Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 69/133 (51%), Gaps = 4/133 (3%)
Query: 437 SLKSADEHVKKIFSCAHRGRKQAVELVKKKHVDSVKRHDLDDTSREVLITKYTVSIRSLQ 496
+++ D+ VK+I S RK+ +++ +++ ++ + + D + E I TV IR+ +
Sbjct: 81 NMEKVDDVVKRILSLEMASRKEKLKIKREQLMNKIAENPEDYRTLEARIVALTVKIRNYE 140
Query: 497 EHHKAKPLDKRAKVWLKELIDKRNKHLRLLRTENYKVFEWLLDELKIVFRPGPTILNKVH 556
EH + DK K L ID+R K LRLLR NY VFE EL + + P +VH
Sbjct: 141 EHMQKHRKDKVHKRHLLMSIDQRKKFLRLLRQTNYDVFEKTCKELGVEYALPPLHFQRVH 200
Query: 557 RKESLRFLVDKHI 569
R RFL K +
Sbjct: 201 R----RFLAKKAL 209
>sp|Q9DC71|RT15_MOUSE 28S ribosomal protein S15, mitochondrial OS=Mus musculus GN=Mrps15
PE=2 SV=2
Length = 258
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 69/133 (51%), Gaps = 4/133 (3%)
Query: 437 SLKSADEHVKKIFSCAHRGRKQAVELVKKKHVDSVKRHDLDDTSREVLITKYTVSIRSLQ 496
+++ D+ VK+I S RK+ +++ +++ ++ + + D + E I TV IR+ +
Sbjct: 82 NIEKVDDVVKRILSLEMASRKEKLKIKQEQLMNKIVENPEDSRTLEAQIIALTVRIRNYE 141
Query: 497 EHHKAKPLDKRAKVWLKELIDKRNKHLRLLRTENYKVFEWLLDELKIVFRPGPTILNKVH 556
EH + DK K L ID+R K L++LR NY VFE EL + + P KVH
Sbjct: 142 EHMQKHRKDKAHKRHLLMSIDRRKKLLKILRQTNYDVFEKTCKELGVEYTLPPLHFQKVH 201
Query: 557 RKESLRFLVDKHI 569
R RFL K +
Sbjct: 202 R----RFLAKKAL 210
>sp|Q06688|SRR1L_YEAST SRR1-like protein BER1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=BER1 PE=1 SV=1
Length = 274
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 67/133 (50%), Gaps = 17/133 (12%)
Query: 179 GINQIICYGIGNFTDSIAAKYQFVLLLLL------KIEYDCEILIYDPIFNELELELIEI 232
I +I C IGNF + A YQF LLL + + E D + +YDPIF + E++ ++
Sbjct: 53 NIKKIRCVAIGNFKEDFPATYQFALLLEITDYIKSEDERDVVVSLYDPIFTKEEIQYLKS 112
Query: 233 FKLELIIQNEECKH-TITHAKTLVYMPRCPIQLINNILYSNWTRENLSNLILLSNSISTV 291
+ +I+ E ++ I + L ++P P+ L NIL S +L L +N I
Sbjct: 113 LGSKWLIEEEFSENDAIDYESVLYFLPHAPLDLTENILSS-----QRPHLWLANNMI--- 164
Query: 292 VDSNTDAFLKSNL 304
S+TD + K+ L
Sbjct: 165 --SHTDRYTKAKL 175
>sp|P82914|RT15_HUMAN 28S ribosomal protein S15, mitochondrial OS=Homo sapiens GN=MRPS15
PE=1 SV=1
Length = 257
Score = 52.8 bits (125), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 68/139 (48%), Gaps = 4/139 (2%)
Query: 431 EYAKCESLKSADEHVKKIFSCAHRGRKQAVELVKKKHVDSVKRHDLDDTSREVLITKYTV 490
+Y ++ D+ VK++ S +K+ +++ +++ + + + D S E I +V
Sbjct: 75 DYQNVPGIEKVDDVVKRLLSLEMANKKEMLKIKQEQFMKKIVANPEDTRSLEARIIALSV 134
Query: 491 SIRSLQEHHKAKPLDKRAKVWLKELIDKRNKHLRLLRTENYKVFEWLLDELKIVFRPGPT 550
IRS +EH + DK K +L ID+R K L+ LR NY VFE + L I + P
Sbjct: 135 KIRSYEEHLEKHRKDKAHKRYLLMSIDQRKKMLKNLRNTNYDVFEKICWGLGIEYTFPPL 194
Query: 551 ILNKVHRKESLRFLVDKHI 569
+ HR RF+ K +
Sbjct: 195 YYRRAHR----RFVTKKAL 209
>sp|Q7VIR3|RS15_HELHP 30S ribosomal protein S15 OS=Helicobacter hepaticus (strain ATCC
51449 / 3B1) GN=rpsO PE=3 SV=1
Length = 90
Score = 42.7 bits (99), Expect = 0.008, Method: Composition-based stats.
Identities = 29/86 (33%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 459 AVELVKKKHVDSVKRHDLDDT-SREVLITKYTVSIRSLQEHHKAKPLDKRAKVWLKELID 517
A+++ KKK + + D DT S EV I + I L EH KA P D +++ L +L+
Sbjct: 2 ALDMAKKKEIIAKFARDSKDTGSSEVQIALLSQRIADLTEHLKANPKDHSSRLGLLKLVG 61
Query: 518 KRNKHLRLLRTENYKVFEWLLDELKI 543
+R L L+ Y + L+ ELK+
Sbjct: 62 QRKSLLSYLKKTQYNRYAKLIGELKL 87
>sp|A7I1V7|RS15_CAMHC 30S ribosomal protein S15 OS=Campylobacter hominis (strain ATCC
BAA-381 / LMG 19568 / NCTC 13146 / CH001A) GN=rpsO PE=3
SV=1
Length = 90
Score = 42.0 bits (97), Expect = 0.017, Method: Composition-based stats.
Identities = 23/80 (28%), Positives = 43/80 (53%)
Query: 464 KKKHVDSVKRHDLDDTSREVLITKYTVSIRSLQEHHKAKPLDKRAKVWLKELIDKRNKHL 523
K + V R + D S EV I + I S+ EH + P D +++ L +L+ +R + +
Sbjct: 8 KAQIVAKFARKEKDTGSSEVQIALLSARIDSITEHMQNNPKDFSSRLGLLKLVGQRKRLM 67
Query: 524 RLLRTENYKVFEWLLDELKI 543
+ L++ NY + L++EL +
Sbjct: 68 KYLKSTNYGAYSKLVNELNL 87
>sp|A5D2S5|RS15_PELTS 30S ribosomal protein S15 OS=Pelotomaculum thermopropionicum
(strain DSM 13744 / JCM 10971 / SI) GN=rpsO PE=3 SV=1
Length = 89
Score = 40.4 bits (93), Expect = 0.044, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 39/78 (50%)
Query: 464 KKKHVDSVKRHDLDDTSREVLITKYTVSIRSLQEHHKAKPLDKRAKVWLKELIDKRNKHL 523
KK + K HD D S EV + T I SL EH K D ++ L +++ +R L
Sbjct: 8 KKNVISRYKLHDNDTGSPEVQVAILTERINSLTEHLKLHKGDHHSRRGLLKMVGQRRALL 67
Query: 524 RLLRTENYKVFEWLLDEL 541
LR +Y+ + L+D+L
Sbjct: 68 NYLRDRHYERYRALIDKL 85
>sp|B4UHG4|RS15_ANASK 30S ribosomal protein S15 OS=Anaeromyxobacter sp. (strain K)
GN=rpsO PE=3 SV=1
Length = 89
Score = 40.0 bits (92), Expect = 0.054, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 44/84 (52%)
Query: 460 VELVKKKHVDSVKRHDLDDTSREVLITKYTVSIRSLQEHHKAKPLDKRAKVWLKELIDKR 519
V+ K++ V KRH+ D S EV + + I L EH K D ++ L +L+ +R
Sbjct: 4 VQEKKQELVQKYKRHEKDTGSPEVQVALLSERIAYLTEHFKTHKKDHHSRRGLLKLVGQR 63
Query: 520 NKHLRLLRTENYKVFEWLLDELKI 543
+ L LRT + ++ L+D+L I
Sbjct: 64 RRLLDYLRTIDQGRYKTLIDQLGI 87
>sp|Q2IQ02|RS15_ANADE 30S ribosomal protein S15 OS=Anaeromyxobacter dehalogenans (strain
2CP-C) GN=rpsO PE=3 SV=1
Length = 89
Score = 40.0 bits (92), Expect = 0.054, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 44/84 (52%)
Query: 460 VELVKKKHVDSVKRHDLDDTSREVLITKYTVSIRSLQEHHKAKPLDKRAKVWLKELIDKR 519
V+ K++ V KRH+ D S EV + + I L EH K D ++ L +L+ +R
Sbjct: 4 VQEKKQELVQKYKRHEKDTGSPEVQVALLSERIAYLTEHFKTHKKDHHSRRGLLKLVGQR 63
Query: 520 NKHLRLLRTENYKVFEWLLDELKI 543
+ L LRT + ++ L+D+L I
Sbjct: 64 RRLLDYLRTIDQGRYKTLIDQLGI 87
>sp|B8JFZ0|RS15_ANAD2 30S ribosomal protein S15 OS=Anaeromyxobacter dehalogenans (strain
2CP-1 / ATCC BAA-258) GN=rpsO PE=3 SV=1
Length = 89
Score = 40.0 bits (92), Expect = 0.054, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 44/84 (52%)
Query: 460 VELVKKKHVDSVKRHDLDDTSREVLITKYTVSIRSLQEHHKAKPLDKRAKVWLKELIDKR 519
V+ K++ V KRH+ D S EV + + I L EH K D ++ L +L+ +R
Sbjct: 4 VQEKKQELVQKYKRHEKDTGSPEVQVALLSERIAYLTEHFKTHKKDHHSRRGLLKLVGQR 63
Query: 520 NKHLRLLRTENYKVFEWLLDELKI 543
+ L LRT + ++ L+D+L I
Sbjct: 64 RRLLDYLRTIDQGRYKTLIDQLGI 87
>sp|A7H9F7|RS15_ANADF 30S ribosomal protein S15 OS=Anaeromyxobacter sp. (strain Fw109-5)
GN=rpsO PE=3 SV=1
Length = 89
Score = 40.0 bits (92), Expect = 0.064, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 44/84 (52%)
Query: 460 VELVKKKHVDSVKRHDLDDTSREVLITKYTVSIRSLQEHHKAKPLDKRAKVWLKELIDKR 519
V+ K++ V KRH+ D S EV + T I L EH K D ++ L +L+ +R
Sbjct: 4 VQERKQELVTKYKRHEKDTGSPEVQVALLTERIAYLTEHFKTHKKDHHSRRGLLKLVGQR 63
Query: 520 NKHLRLLRTENYKVFEWLLDELKI 543
+ L LR+ + ++ L+D+L I
Sbjct: 64 RRLLDYLRSIDQGRYKTLIDQLGI 87
>sp|A6LJ39|RS15_THEM4 30S ribosomal protein S15 OS=Thermosipho melanesiensis (strain
BI429 / DSM 12029) GN=rpsO PE=3 SV=1
Length = 84
Score = 39.3 bits (90), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 39/70 (55%)
Query: 474 HDLDDTSREVLITKYTVSIRSLQEHHKAKPLDKRAKVWLKELIDKRNKHLRLLRTENYKV 533
H+ D S EV + T I+ L EH K P D ++ L +L+ +R K L+ LR +N +
Sbjct: 13 HEGDTGSAEVQVALLTARIKHLTEHLKKHPKDYHSRRGLMKLVGRRRKILKYLRNKNPEA 72
Query: 534 FEWLLDELKI 543
++ ++ +L +
Sbjct: 73 YKEVIQKLGL 82
>sp|B1GZG7|RS15_UNCTG 30S ribosomal protein S15 OS=Uncultured termite group 1 bacterium
phylotype Rs-D17 GN=rpsO PE=3 SV=1
Length = 86
Score = 38.5 bits (88), Expect = 0.15, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 37/78 (47%)
Query: 464 KKKHVDSVKRHDLDDTSREVLITKYTVSIRSLQEHHKAKPLDKRAKVWLKELIDKRNKHL 523
KK VD K H D S EV I T I+ L +H K P D ++V ++I +R + L
Sbjct: 5 KKTVVDQFKVHATDTGSSEVQIAILTTRIKYLSDHFKKFPKDFASRVGFLKMIGQRRQLL 64
Query: 524 RLLRTENYKVFEWLLDEL 541
L+ N + L+ L
Sbjct: 65 DYLKKYNKDSYSSLIKRL 82
>sp|A7HNS0|RS15_FERNB 30S ribosomal protein S15 OS=Fervidobacterium nodosum (strain ATCC
35602 / DSM 5306 / Rt17-B1) GN=rpsO PE=3 SV=1
Length = 84
Score = 38.1 bits (87), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 39/70 (55%)
Query: 474 HDLDDTSREVLITKYTVSIRSLQEHHKAKPLDKRAKVWLKELIDKRNKHLRLLRTENYKV 533
HD D S V I T IR L EH K P D ++ L +++ +R K L+ L ++ ++
Sbjct: 13 HDTDTGSTAVQIALLTARIRHLTEHLKNHPKDFHSRRGLMKMVGRRRKMLKYLMKKDPEL 72
Query: 534 FEWLLDELKI 543
++ LL++L +
Sbjct: 73 YKQLLEKLSL 82
>sp|A1VG87|RS15_DESVV 30S ribosomal protein S15 OS=Desulfovibrio vulgaris subsp. vulgaris
(strain DP4) GN=rpsO PE=3 SV=1
Length = 89
Score = 37.7 bits (86), Expect = 0.32, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 40/78 (51%)
Query: 464 KKKHVDSVKRHDLDDTSREVLITKYTVSIRSLQEHHKAKPLDKRAKVWLKELIDKRNKHL 523
KK +D+ +H+ D S EV + T I L H K D ++ L +L+ +R K L
Sbjct: 8 KKAVIDAHAKHEGDTGSPEVQVALLTARIEQLTGHFKVHKKDYHSRTGLLKLVGQRRKLL 67
Query: 524 RLLRTENYKVFEWLLDEL 541
L+ ++ + + L+++L
Sbjct: 68 NYLKKKDVQRYRALIEKL 85
>sp|Q72ER5|RS15_DESVH 30S ribosomal protein S15 OS=Desulfovibrio vulgaris (strain
Hildenborough / ATCC 29579 / NCIMB 8303) GN=rpsO PE=3
SV=1
Length = 89
Score = 37.7 bits (86), Expect = 0.32, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 40/78 (51%)
Query: 464 KKKHVDSVKRHDLDDTSREVLITKYTVSIRSLQEHHKAKPLDKRAKVWLKELIDKRNKHL 523
KK +D+ +H+ D S EV + T I L H K D ++ L +L+ +R K L
Sbjct: 8 KKAVIDAHAKHEGDTGSPEVQVALLTARIEQLTGHFKVHKKDYHSRTGLLKLVGQRRKLL 67
Query: 524 RLLRTENYKVFEWLLDEL 541
L+ ++ + + L+++L
Sbjct: 68 NYLKKKDVQRYRALIEKL 85
>sp|B1LBY1|RS15_THESQ 30S ribosomal protein S15 OS=Thermotoga sp. (strain RQ2) GN=rpsO
PE=3 SV=1
Length = 90
Score = 37.4 bits (85), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%)
Query: 474 HDLDDTSREVLITKYTVSIRSLQEHHKAKPLDKRAKVWLKELIDKRNKHLRLLRTENYKV 533
H+ D S EV I T I+ L EH + P D ++ L ++I +R K L+ LR + +V
Sbjct: 19 HENDTGSVEVQIALLTARIKHLTEHLRKHPKDFHSRRGLMKMIGRRRKMLKYLRHKKPEV 78
Query: 534 FEWLLDELKI 543
+ L+ +L I
Sbjct: 79 YRELIAKLGI 88
>sp|A5IMM9|RS15_THEP1 30S ribosomal protein S15 OS=Thermotoga petrophila (strain RKU-1 /
ATCC BAA-488 / DSM 13995) GN=rpsO PE=3 SV=1
Length = 90
Score = 37.4 bits (85), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%)
Query: 474 HDLDDTSREVLITKYTVSIRSLQEHHKAKPLDKRAKVWLKELIDKRNKHLRLLRTENYKV 533
H+ D S EV I T I+ L EH + P D ++ L ++I +R K L+ LR + +V
Sbjct: 19 HENDTGSVEVQIALLTARIKHLTEHLRKHPKDFHSRRGLMKMIGRRRKMLKYLRHKKPEV 78
Query: 534 FEWLLDELKI 543
+ L+ +L I
Sbjct: 79 YRELIAKLGI 88
>sp|Q9X165|RS15_THEMA 30S ribosomal protein S15 OS=Thermotoga maritima (strain ATCC 43589
/ MSB8 / DSM 3109 / JCM 10099) GN=rpsO PE=3 SV=1
Length = 90
Score = 37.4 bits (85), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%)
Query: 474 HDLDDTSREVLITKYTVSIRSLQEHHKAKPLDKRAKVWLKELIDKRNKHLRLLRTENYKV 533
H+ D S EV I T I+ L EH + P D ++ L ++I +R K L+ LR + +V
Sbjct: 19 HENDTGSVEVQIALLTARIKHLTEHLRKHPKDFHSRRGLMKMIGRRRKMLKYLRHKKPEV 78
Query: 534 FEWLLDELKI 543
+ L+ +L I
Sbjct: 79 YRELIAKLGI 88
>sp|Q5X1C6|RS15_LEGPA 30S ribosomal protein S15 OS=Legionella pneumophila (strain Paris)
GN=rpsO PE=3 SV=1
Length = 91
Score = 37.4 bits (85), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 41/76 (53%)
Query: 468 VDSVKRHDLDDTSREVLITKYTVSIRSLQEHHKAKPLDKRAKVWLKELIDKRNKHLRLLR 527
++ KR D D S EV ++ T I+ L +H K D ++ L+EL++KR K L+ L+
Sbjct: 12 INEYKRGDKDTGSPEVQVSLITGRIKYLTDHFKENKKDFHSRRGLQELVNKRRKLLKYLK 71
Query: 528 TENYKVFEWLLDELKI 543
+ ++ L+ L +
Sbjct: 72 RNDQARYQTLIQNLGL 87
>sp|Q5WT39|RS15_LEGPL 30S ribosomal protein S15 OS=Legionella pneumophila (strain Lens)
GN=rpsO PE=3 SV=1
Length = 91
Score = 37.0 bits (84), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 41/76 (53%)
Query: 468 VDSVKRHDLDDTSREVLITKYTVSIRSLQEHHKAKPLDKRAKVWLKELIDKRNKHLRLLR 527
++ KR D D S EV ++ T I+ L +H K D ++ L+EL++KR K L+ L+
Sbjct: 12 INEYKRGDKDTGSPEVQVSLITSRIKYLTDHFKENKKDFHSRRGLQELVNKRRKLLKYLK 71
Query: 528 TENYKVFEWLLDELKI 543
+ ++ L+ L +
Sbjct: 72 RNDQDRYQTLIQNLGL 87
>sp|Q5ZRV7|RS15_LEGPH 30S ribosomal protein S15 OS=Legionella pneumophila subsp.
pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM
7513) GN=rpsO PE=3 SV=1
Length = 91
Score = 37.0 bits (84), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 41/76 (53%)
Query: 468 VDSVKRHDLDDTSREVLITKYTVSIRSLQEHHKAKPLDKRAKVWLKELIDKRNKHLRLLR 527
++ KR D D S EV ++ T I+ L +H K D ++ L+EL++KR K L+ L+
Sbjct: 12 INEYKRGDKDTGSPEVQVSLITSRIKYLTDHFKENKKDFHSRRGLQELVNKRRKLLKYLK 71
Query: 528 TENYKVFEWLLDELKI 543
+ ++ L+ L +
Sbjct: 72 RNDQDRYQTLIQNLGL 87
>sp|A5IHU4|RS15_LEGPC 30S ribosomal protein S15 OS=Legionella pneumophila (strain Corby)
GN=rpsO PE=3 SV=1
Length = 91
Score = 37.0 bits (84), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 41/76 (53%)
Query: 468 VDSVKRHDLDDTSREVLITKYTVSIRSLQEHHKAKPLDKRAKVWLKELIDKRNKHLRLLR 527
++ KR D D S EV ++ T I+ L +H K D ++ L+EL++KR K L+ L+
Sbjct: 12 INEYKRGDKDTGSPEVQVSLITSRIKYLTDHFKENKKDFHSRRGLQELVNKRRKLLKYLK 71
Query: 528 TENYKVFEWLLDELKI 543
+ ++ L+ L +
Sbjct: 72 RNDQDRYQTLIQNLGL 87
>sp|B8DN08|RS15_DESVM 30S ribosomal protein S15 OS=Desulfovibrio vulgaris (strain
Miyazaki F / DSM 19637) GN=rpsO PE=3 SV=1
Length = 89
Score = 36.6 bits (83), Expect = 0.59, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 40/78 (51%)
Query: 464 KKKHVDSVKRHDLDDTSREVLITKYTVSIRSLQEHHKAKPLDKRAKVWLKELIDKRNKHL 523
KK +D +H+ D S EV + T I L H K D ++ L +++ +R K L
Sbjct: 8 KKSIIDVHAKHEGDTGSPEVQVALLTARIEQLTGHFKTHKKDFHSRTGLLKMVGQRRKLL 67
Query: 524 RLLRTENYKVFEWLLDEL 541
+ L+ ++ + + L+++L
Sbjct: 68 KYLKAKDVQRYRALIEKL 85
>sp|B0JPD9|RS15_MICAN 30S ribosomal protein S15 OS=Microcystis aeruginosa (strain
NIES-843) GN=rpsO PE=3 SV=1
Length = 89
Score = 36.6 bits (83), Expect = 0.73, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 41/80 (51%)
Query: 464 KKKHVDSVKRHDLDDTSREVLITKYTVSIRSLQEHHKAKPLDKRAKVWLKELIDKRNKHL 523
K++ + + H+ D S E+ + T I L EH KA P D ++ L ++I +R L
Sbjct: 8 KQELISQYQAHETDTGSSELQVAFLTERINQLTEHLKANPKDHASRRGLLQMIGRRRGLL 67
Query: 524 RLLRTENYKVFEWLLDELKI 543
++ ++ + ++ L+ L I
Sbjct: 68 TYIQKKDQQRYQTLIGRLGI 87
>sp|A9BH72|RS15_PETMO 30S ribosomal protein S15 OS=Petrotoga mobilis (strain DSM 10674 /
SJ95) GN=rpsO PE=3 SV=1
Length = 91
Score = 36.2 bits (82), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%)
Query: 468 VDSVKRHDLDDTSREVLITKYTVSIRSLQEHHKAKPLDKRAKVWLKELIDKRNKHLRLLR 527
++ K +D D S EV + + I+ L EH K P D ++ L ++ KR K L+ LR
Sbjct: 14 IEEFKINDKDTGSVEVQVALLSARIKHLTEHLKQHPKDYHSRRGLMMMVGKRRKMLKYLR 73
Query: 528 TENYKVFEWLLDELKI 543
V++ ++++L I
Sbjct: 74 KSKPLVYQEIINKLGI 89
>sp|B7IFB5|RS15_THEAB 30S ribosomal protein S15 OS=Thermosipho africanus (strain TCF52B)
GN=rpsO PE=3 SV=1
Length = 84
Score = 36.2 bits (82), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 39/70 (55%)
Query: 474 HDLDDTSREVLITKYTVSIRSLQEHHKAKPLDKRAKVWLKELIDKRNKHLRLLRTENYKV 533
H+ D S EV I T I+ L EH K P D ++ L +L+ +R K L+ LR ++ +
Sbjct: 13 HEGDTGSTEVQIALLTARIKHLTEHLKKHPKDYHSRRGLMKLVGRRRKILKYLRNKDPES 72
Query: 534 FEWLLDELKI 543
++ ++ +L +
Sbjct: 73 YKNVIQKLGL 82
>sp|A1AMM5|RS15_PELPD 30S ribosomal protein S15 OS=Pelobacter propionicus (strain DSM
2379) GN=rpsO PE=3 SV=1
Length = 88
Score = 36.2 bits (82), Expect = 0.90, Method: Composition-based stats.
Identities = 23/80 (28%), Positives = 41/80 (51%)
Query: 464 KKKHVDSVKRHDLDDTSREVLITKYTVSIRSLQEHHKAKPLDKRAKVWLKELIDKRNKHL 523
K++ + + K+HD D S EV I T I L EH K D ++ L +L+ +R + L
Sbjct: 7 KQEIIKAFKKHDSDTGSPEVQIAILTERITYLTEHFKVHKKDHHSRRGLLKLVGQRRRLL 66
Query: 524 RLLRTENYKVFEWLLDELKI 543
L+ + ++ +++ L I
Sbjct: 67 DYLKGKEVARYKAVIERLGI 86
>sp|C0QTM4|RS15_PERMH 30S ribosomal protein S15 OS=Persephonella marina (strain DSM 14350
/ EX-H1) GN=rpsO PE=3 SV=1
Length = 94
Score = 35.8 bits (81), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%)
Query: 473 RHDLDDTSREVLITKYTVSIRSLQEHHKAKPLDKRAKVWLKELIDKRNKHLRLLRTENYK 532
RH+ D S EV I T I++L EH K D ++ L +++KR K L L+ +++
Sbjct: 17 RHEGDTGSPEVQIAILTERIKNLTEHIKKNKKDLHSRRGLIGMVNKRRKLLNYLKRTDFE 76
Query: 533 VFEWLLDELKI 543
++ ++ EL I
Sbjct: 77 RYQKIIQELNI 87
>sp|C4XJA5|RS15_DESMR 30S ribosomal protein S15 OS=Desulfovibrio magneticus (strain ATCC
700980 / DSM 13731 / RS-1) GN=rpsO PE=3 SV=1
Length = 89
Score = 35.8 bits (81), Expect = 1.1, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 36/70 (51%)
Query: 472 KRHDLDDTSREVLITKYTVSIRSLQEHHKAKPLDKRAKVWLKELIDKRNKHLRLLRTENY 531
K+HD D S EV + T I L H K+ P D ++ L +L+ +R K L L+ +
Sbjct: 16 KKHDGDTGSPEVQVALLTSRIVYLTGHFKSHPKDFHSRTGLLKLVGQRRKLLNYLKKTDV 75
Query: 532 KVFEWLLDEL 541
+ + L+ +L
Sbjct: 76 QRYRDLIAKL 85
>sp|B3EAF1|RS15_GEOLS 30S ribosomal protein S15 OS=Geobacter lovleyi (strain ATCC
BAA-1151 / DSM 17278 / SZ) GN=rpsO PE=3 SV=1
Length = 88
Score = 35.8 bits (81), Expect = 1.2, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 44/80 (55%)
Query: 464 KKKHVDSVKRHDLDDTSREVLITKYTVSIRSLQEHHKAKPLDKRAKVWLKELIDKRNKHL 523
K++ +++ K+H+ D S EV I T I L +H K D ++ L +L+ +R + L
Sbjct: 7 KQEIINNFKKHEGDTGSPEVQIAILTARIVYLTDHFKIHKKDHHSRRGLLKLVGQRRRML 66
Query: 524 RLLRTENYKVFEWLLDELKI 543
L++ + ++ ++++L I
Sbjct: 67 DYLKSRDLDRYKKVIEQLGI 86
>sp|Q3A4A2|RS15_PELCD 30S ribosomal protein S15 OS=Pelobacter carbinolicus (strain DSM
2380 / Gra Bd 1) GN=rpsO PE=3 SV=1
Length = 88
Score = 35.4 bits (80), Expect = 1.3, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 41/80 (51%)
Query: 464 KKKHVDSVKRHDLDDTSREVLITKYTVSIRSLQEHHKAKPLDKRAKVWLKELIDKRNKHL 523
K++ +D KRH+ D S EV I + I L EH + D ++ L +++ +R + L
Sbjct: 7 KQELIDQYKRHEGDTGSPEVQIALLSERITYLTEHFRTHKKDHHSRRGLLKIVGQRRRLL 66
Query: 524 RLLRTENYKVFEWLLDELKI 543
L++ + + + ++ L I
Sbjct: 67 DYLKSNDVERYRAIIKSLGI 86
>sp|A4VPN7|RS15_PSEU5 30S ribosomal protein S15 OS=Pseudomonas stutzeri (strain A1501)
GN=rpsO PE=3 SV=1
Length = 89
Score = 35.4 bits (80), Expect = 1.4, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 40/78 (51%)
Query: 464 KKKHVDSVKRHDLDDTSREVLITKYTVSIRSLQEHHKAKPLDKRAKVWLKELIDKRNKHL 523
K + V+ K+ + D S EV + T +I LQ+H KA D ++ L ++++R K L
Sbjct: 8 KAQIVNEYKQAEGDTGSPEVQVALLTANINKLQDHFKANGKDHHSRRGLIRMVNQRRKLL 67
Query: 524 RLLRTENYKVFEWLLDEL 541
L+ ++ + L+ L
Sbjct: 68 DYLKGKDTTRYSALIGRL 85
>sp|C1DFK6|RS15_AZOVD 30S ribosomal protein S15 OS=Azotobacter vinelandii (strain DJ /
ATCC BAA-1303) GN=rpsO PE=3 SV=1
Length = 89
Score = 35.4 bits (80), Expect = 1.6, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 40/78 (51%)
Query: 464 KKKHVDSVKRHDLDDTSREVLITKYTVSIRSLQEHHKAKPLDKRAKVWLKELIDKRNKHL 523
K + V+ K+ + D S EV + T +I LQ+H KA D ++ L ++++R K L
Sbjct: 8 KAQIVNEYKQAEGDTGSPEVQVALLTANINKLQDHFKANGKDHHSRRGLIRMVNQRRKLL 67
Query: 524 RLLRTENYKVFEWLLDEL 541
L+ ++ + L+ L
Sbjct: 68 DYLKGKDTTRYSTLIGRL 85
>sp|Q1QSZ3|RS15_CHRSD 30S ribosomal protein S15 OS=Chromohalobacter salexigens (strain
DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=rpsO PE=3 SV=1
Length = 89
Score = 35.0 bits (79), Expect = 1.8, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 40/74 (54%)
Query: 468 VDSVKRHDLDDTSREVLITKYTVSIRSLQEHHKAKPLDKRAKVWLKELIDKRNKHLRLLR 527
V+ R + D S EV + + +I LQ+H K+ D ++ L ++++R K L L+
Sbjct: 12 VNEYGRGENDTGSPEVQVALLSANIDGLQDHFKSNKQDHHSRRGLIRMVNQRRKLLDYLK 71
Query: 528 TENYKVFEWLLDEL 541
++++ ++ L+ L
Sbjct: 72 RKDFERYQSLIQRL 85
>sp|B2V901|RS15_SULSY 30S ribosomal protein S15 OS=Sulfurihydrogenibium sp. (strain
YO3AOP1) GN=rpsO PE=3 SV=1
Length = 95
Score = 35.0 bits (79), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%)
Query: 474 HDLDDTSREVLITKYTVSIRSLQEHHKAKPLDKRAKVWLKELIDKRNKHLRLLRTENYKV 533
H+ D S EV I T IR+L EH KA D ++ L +++KR K L L+ E+ +
Sbjct: 18 HENDTGSPEVQIAVLTERIRNLTEHIKANKKDLHSRRGLIGMVNKRRKLLNYLKRESEER 77
Query: 534 FEWLLDELKI 543
+ +++ L I
Sbjct: 78 YRKIIEALNI 87
>sp|A1U5Z7|RS15_MARAV 30S ribosomal protein S15 OS=Marinobacter aquaeolei (strain ATCC
700491 / DSM 11845 / VT8) GN=rpsO PE=3 SV=1
Length = 89
Score = 35.0 bits (79), Expect = 2.0, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 39/78 (50%)
Query: 464 KKKHVDSVKRHDLDDTSREVLITKYTVSIRSLQEHHKAKPLDKRAKVWLKELIDKRNKHL 523
K + V ++ D D S EV + + +I LQ+H KA D ++ L ++++R K L
Sbjct: 8 KAQIVKDFQQGDGDTGSPEVQVALLSANINKLQDHFKANKQDHHSRRGLIRMVNQRRKLL 67
Query: 524 RLLRTENYKVFEWLLDEL 541
L+ +N + L+ L
Sbjct: 68 DYLKRKNADRYLELIQRL 85
>sp|B8J1Y0|RS15_DESDA 30S ribosomal protein S15 OS=Desulfovibrio desulfuricans (strain
ATCC 27774 / DSM 6949) GN=rpsO PE=3 SV=1
Length = 89
Score = 34.7 bits (78), Expect = 2.6, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 38/78 (48%)
Query: 464 KKKHVDSVKRHDLDDTSREVLITKYTVSIRSLQEHHKAKPLDKRAKVWLKELIDKRNKHL 523
KK +D+ +H+ D S EV + T I L H K D ++ L +L+ +R L
Sbjct: 8 KKSVIDAHAKHEGDTGSPEVQVALLTARIEDLTGHFKEHKKDFHSRTGLLKLVGRRRNIL 67
Query: 524 RLLRTENYKVFEWLLDEL 541
L+ + + + L+++L
Sbjct: 68 NYLKKTDVQRYRALIEKL 85
>sp|Q38WR4|RS15_LACSS 30S ribosomal protein S15 OS=Lactobacillus sakei subsp. sakei
(strain 23K) GN=rpsO PE=3 SV=1
Length = 89
Score = 34.3 bits (77), Expect = 2.9, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 34/78 (43%)
Query: 464 KKKHVDSVKRHDLDDTSREVLITKYTVSIRSLQEHHKAKPLDKRAKVWLKELIDKRNKHL 523
K + ++ RH+ D S EV I T I SL EH D + V + I R L
Sbjct: 8 KNEIINEYARHEGDTGSAEVQIAVLTAEINSLNEHLSVHKKDHHSYVGQMKKIGHRRNLL 67
Query: 524 RLLRTENYKVFEWLLDEL 541
R LR + + + L+ L
Sbjct: 68 RYLRDNDIQRYRELIKSL 85
>sp|Q2JPU2|RS15_SYNJB 30S ribosomal protein S15 OS=Synechococcus sp. (strain
JA-2-3B'a(2-13)) GN=rpsO PE=3 SV=1
Length = 91
Score = 34.3 bits (77), Expect = 3.0, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 38/80 (47%)
Query: 464 KKKHVDSVKRHDLDDTSREVLITKYTVSIRSLQEHHKAKPLDKRAKVWLKELIDKRNKHL 523
K++ ++S + HD D S EV + T I L +H + P D ++ L +I +R + L
Sbjct: 8 KQQIIESYRLHDTDTGSAEVQVALLTSRINQLSQHLQRNPKDFNSRRGLLMMIGRRKRLL 67
Query: 524 RLLRTENYKVFEWLLDELKI 543
+ + F L + L I
Sbjct: 68 NYIAKHSPDRFRELAERLNI 87
>sp|B5YEA9|RS15_DICT6 30S ribosomal protein S15 OS=Dictyoglomus thermophilum (strain ATCC
35947 / DSM 3960 / H-6-12) GN=rpsO PE=3 SV=1
Length = 89
Score = 34.3 bits (77), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 45/78 (57%)
Query: 464 KKKHVDSVKRHDLDDTSREVLITKYTVSIRSLQEHHKAKPLDKRAKVWLKELIDKRNKHL 523
KK+ ++ + ++ D S EV I T I+ L EH K D ++V L ++I +R K L
Sbjct: 8 KKQIIEKFRLNENDSGSPEVQIALLTERIKRLTEHLKVHKKDYHSRVGLLKMIGRRRKLL 67
Query: 524 RLLRTENYKVFEWLLDEL 541
+ L+ ++++ ++ L+ EL
Sbjct: 68 KYLQEKDFERYKKLIQEL 85
>sp|Q6MDI1|RS15_PARUW 30S ribosomal protein S15 OS=Protochlamydia amoebophila (strain
UWE25) GN=rpsO PE=3 SV=1
Length = 89
Score = 33.9 bits (76), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 39/70 (55%)
Query: 474 HDLDDTSREVLITKYTVSIRSLQEHHKAKPLDKRAKVWLKELIDKRNKHLRLLRTENYKV 533
H+ D S +V I T I L EH K P D +++ L +L+ +R + L L + + K
Sbjct: 18 HEKDTGSADVQIAILTERITELTEHLKRAPKDHGSRLALLKLVGQRRRLLDYLNSTDTKR 77
Query: 534 FEWLLDELKI 543
++ L+++LK+
Sbjct: 78 YQTLINKLKL 87
>sp|B9M1G4|RS15_GEOSF 30S ribosomal protein S15 OS=Geobacter sp. (strain FRC-32) GN=rpsO
PE=3 SV=1
Length = 88
Score = 33.9 bits (76), Expect = 4.6, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 41/80 (51%)
Query: 464 KKKHVDSVKRHDLDDTSREVLITKYTVSIRSLQEHHKAKPLDKRAKVWLKELIDKRNKHL 523
K++ + + K HD D S EV I T I L EH K D ++ L +++ +R L
Sbjct: 7 KQEIIGAYKLHDSDTGSPEVQIAILTERITYLTEHFKTHKKDHHSRRGLLKIVGQRRGLL 66
Query: 524 RLLRTENYKVFEWLLDELKI 543
L+ ++ + + ++++L I
Sbjct: 67 DYLKKKDVERYRSIIEKLGI 86
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.135 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 232,658,399
Number of Sequences: 539616
Number of extensions: 9741108
Number of successful extensions: 31488
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 145
Number of HSP's successfully gapped in prelim test: 124
Number of HSP's that attempted gapping in prelim test: 31078
Number of HSP's gapped (non-prelim): 495
length of query: 648
length of database: 191,569,459
effective HSP length: 124
effective length of query: 524
effective length of database: 124,657,075
effective search space: 65320307300
effective search space used: 65320307300
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)