Your job contains 1 sequence.
>psy5134
MPLDRMTQNEECKHTITHAKTLVYMPRCPIQLINNILYSNWTRENLSNLILLSNSISTVV
DSNTDALCILALANVVKDKLKQKSIMCMTIRTTQLTPVMLAMVMMVHLHVTTSIFNSMMH
VYNELNIPTSWHILKCSFSIFRRIESVKEELGSSDYYLQLINLISKSLNLSSANSTTQGI
NQIICYGIGNFTDSIAAKYQFVLLLLLKIEYDCEILIYDPIFNELELELIEIFKLELIIQ
NEECKHTITHAKTLVYMPRCPIQLINNILYSNWTRENLSNLILLSNSISTVVDSNTDAFL
KSNLQFLFHIKEFLEEVPVVNNFKFNDIFNDTSLHCFLPTKLNSIEQDIWDLRFLEPEYT
ECNFEKTKSGAFVSSLIKVGAGLGETNVCGYKQLIKIKWKRPEPVAFNDPRKSGDQILEL
GPLELDKPTLEYAKCESLKSADEHVKKIFSCAHRGRKQAVELVKKKHVDSVKRHDLDDTS
REVLITKYTVSIRSLQEHHKAKPLDKRAKVWLKELIDKRNKHLRLLRTENYKVFEWLLDE
LKIVFRPGPTILNKVHRKESLRFLVDKHIGDVKTERLTQLRNKFNQEKINFYKKKAEFLE
WTMEQEKKYGKEPTVTKEEIESIWKKYEELAEKELEQYEPPKHYHQFA
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy5134
(648 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0026261 - symbol:bonsai "bonsai" species:7227 "Dro... 395 1.0e-36 1
UNIPROTKB|Q9UH36 - symbol:SRRD "SRR1-like protein" specie... 252 9.4e-21 1
ZFIN|ZDB-GENE-060825-269 - symbol:srrd "SRR1 domain conta... 208 5.5e-16 1
UNIPROTKB|E1BBB4 - symbol:MRPS15 "28S ribosomal protein S... 178 1.3e-11 1
ZFIN|ZDB-GENE-040718-188 - symbol:mrps15 "mitochondrial r... 179 1.5e-11 1
WB|WBGene00010624 - symbol:mrps-15 species:6239 "Caenorha... 180 5.0e-11 1
RGD|1359675 - symbol:Mrps15 "mitochondrial ribosomal prot... 169 2.4e-10 1
UNIPROTKB|I3L8X7 - symbol:MRPS15 "Uncharacterized protein... 168 2.9e-10 1
FB|FBgn0038582 - symbol:CG7988 species:7227 "Drosophila m... 167 7.2e-10 1
MGI|MGI:1913657 - symbol:Mrps15 "mitochondrial ribosomal ... 164 1.1e-09 1
UNIPROTKB|J9NTS2 - symbol:MRPS15 "Uncharacterized protein... 147 2.1e-09 1
UNIPROTKB|P82914 - symbol:MRPS15 "28S ribosomal protein S... 150 5.3e-08 1
MGI|MGI:1917368 - symbol:Srrd "SRR1 domain containing" sp... 146 1.5e-07 2
UNIPROTKB|F1N742 - symbol:F1N742 "Uncharacterized protein... 139 6.2e-07 1
TAIR|locus:2148333 - symbol:SRR1 "AT5G59560" species:3702... 114 0.00089 1
>FB|FBgn0026261 [details] [associations]
symbol:bonsai "bonsai" species:7227 "Drosophila melanogaster"
[GO:0040008 "regulation of growth" evidence=IMP] [GO:0003735
"structural constituent of ribosome" evidence=ISS] [GO:0005763
"mitochondrial small ribosomal subunit" evidence=ISS] [GO:0006412
"translation" evidence=ISS] [GO:0005739 "mitochondrion"
evidence=IDA] InterPro:IPR000589 Pfam:PF00312 EMBL:AE013599
GO:GO:0006412 GO:GO:0040008 GO:GO:0003735 GO:GO:0005763
Gene3D:1.10.287.10 InterPro:IPR009068 SUPFAM:SSF47060
HAMAP:MF_01343_B eggNOG:COG0184 GeneTree:ENSGT00390000001737
EMBL:AF435962 EMBL:AY060712 RefSeq:NP_611691.1 UniGene:Dm.3508
ProteinModelPortal:Q8WTC1 SMR:Q8WTC1 STRING:Q8WTC1 PaxDb:Q8WTC1
EnsemblMetazoa:FBtr0071860 GeneID:37587 KEGG:dme:Dmel_CG4207
UCSC:CG4207-RA CTD:37587 FlyBase:FBgn0026261 InParanoid:Q8WTC1
OMA:PEKSGDL OrthoDB:EOG4CC2HV PhylomeDB:Q8WTC1 GenomeRNAi:37587
NextBio:804427 Bgee:Q8WTC1 GermOnline:CG4207 Uniprot:Q8WTC1
Length = 280
Score = 395 (144.1 bits), Expect = 1.0e-36, P = 1.0e-36
Identities = 87/230 (37%), Positives = 131/230 (56%)
Query: 391 YKQLIKIKWKRPEPVAFNDPRKSGDQILELGPLELDKPTLEYAKCESLKSADEHVKKIFS 450
+K +KIKW RPE +A P KSGD + +L PL+ D+ EY C+ L ADE VK +F
Sbjct: 21 FKSDLKIKWMRPEKIACYKPEKSGD-LAKLPPLKADELLPEYRDCKELDKADESVKSLFK 79
Query: 451 CAHRGRKQAVELVKKKHVDSVKRHDLDDTSREVLITKYTVSIRSLQEHHKAKPLDKRAKV 510
++ + + + V V+RH D S E + K T IR QEH P DK KV
Sbjct: 80 LSNNASYLTTKFYRDEMVKEVQRHAQDFGSMEAKLAKMTAVIRRYQEHMDKHPRDKMIKV 139
Query: 511 WLKELIDKRNKHLRLLRTENYKVFEWLLDELKIVFRPGPTILNKVHRKESLRFLVDKHIG 570
LKELIDKR K L+ LR +Y FEW+L++L +V++P PT + + RKESL+ L D +
Sbjct: 140 RLKELIDKRKKFLKYLRRWDYPRFEWILEKLDLVYKPPPTHFHWITRKESLQKLTDIYCE 199
Query: 571 DVKTERLTQLRNKFNQEKINFYKKKAEFLEWTMEQEKKYGKEPTVTKEEI 620
++K ERL + ++I F ++ + +++ +++ TVT+E+I
Sbjct: 200 NLKEERLEAYHKQLQAQQIPFLEEAIKKMQFVRQEQISCDVPVTVTEEKI 249
>UNIPROTKB|Q9UH36 [details] [associations]
symbol:SRRD "SRR1-like protein" species:9606 "Homo sapiens"
[GO:0048511 "rhythmic process" evidence=IEA] GO:GO:0048511
EMBL:Z99714 eggNOG:NOG279172 InterPro:IPR012942 Pfam:PF07985
EMBL:BC066962 IPI:IPI00295865 RefSeq:NP_001013716.2
UniGene:Hs.709914 ProteinModelPortal:Q9UH36 STRING:Q9UH36
PhosphoSite:Q9UH36 DMDM:31340433 PRIDE:Q9UH36
Ensembl:ENST00000215917 GeneID:402055 KEGG:hsa:402055
UCSC:uc010gve.3 CTD:402055 GeneCards:GC22P026879 HGNC:HGNC:33910
HPA:HPA002945 neXtProt:NX_Q9UH36 PharmGKB:PA162404806
HOGENOM:HOG000154422 HOVERGEN:HBG062240 InParanoid:Q9UH36
OMA:IGNFATC OrthoDB:EOG48GW3S PhylomeDB:Q9UH36 GenomeRNAi:402055
NextBio:107272 Bgee:Q9UH36 CleanEx:HS_SRRD Genevestigator:Q9UH36
GermOnline:ENSG00000100104 Uniprot:Q9UH36
Length = 339
Score = 252 (93.8 bits), Expect = 9.4e-21, P = 9.4e-21
Identities = 61/184 (33%), Positives = 87/184 (47%)
Query: 184 ICYGIGNFTDSIAAKYQFVLLLLLKIEYDCEI-----LIYDPXXXXXXXXXXXXXXXXXX 238
+CYGIGNF I A+ Q LLLL +E C+I +YDP
Sbjct: 142 VCYGIGNFATCIVARNQLTFLLLL-LE-KCQIPRSHCWVYDPLFSQLEIEVLNTLGVTVL 199
Query: 239 XQNEECKHTITHAKTLVYMPRCPIQLINNILYSNWTREXXXXXXXXXXXXXTVVDSNTDA 298
+NEE K +I T+ YM C L NN+L+SNW+ + + +
Sbjct: 200 SENEEGKRSIRGEPTIFYMLHCGTALYNNLLWSNWSVDALSKMVIIGNSFKGLEERLLAR 259
Query: 299 FLKSNLQFLFHIKEFLEEVPVVNNFKFNDIFNDTSLHCFLPTKLNSIEQDIWDLRFLEPE 358
L+ N ++ I + LEE+ ++ DIFNDTS+H F KL + DIW+ R EP+
Sbjct: 260 ILQKNYPYIAKILKGLEELEFPQTSQYMDIFNDTSVHWFPVQKLEQLSIDIWEFRE-EPD 318
Query: 359 YTEC 362
Y +C
Sbjct: 319 YQDC 322
>ZFIN|ZDB-GENE-060825-269 [details] [associations]
symbol:srrd "SRR1 domain containing" species:7955
"Danio rerio" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] ZFIN:ZDB-GENE-060825-269
InterPro:IPR012942 Pfam:PF07985 CTD:402055 EMBL:BC122414
IPI:IPI00786537 RefSeq:NP_001038892.1 UniGene:Dr.82946
GeneID:751717 KEGG:dre:751717 HOVERGEN:HBG100667 InParanoid:Q0P3W1
NextBio:20917859 Uniprot:Q0P3W1
Length = 274
Score = 208 (78.3 bits), Expect = 5.5e-16, P = 5.5e-16
Identities = 52/184 (28%), Positives = 80/184 (43%)
Query: 182 QIICYGIGNFTDSIAAKYQFVLLLLLKIEYDCEI---LIYDPXXXXXXXXXXXXXXXXXX 238
Q +CYG+G+F ++A++Q +LLLL + +YDP
Sbjct: 82 QCVCYGLGHFESCVSARFQLAMLLLLLETLQIPMSSCCVYDPVFSPSECDALKELGFTVL 141
Query: 239 XQNEECKHTITHAKTLVYMPRCPIQLINNILYSNWTREXXXXXXXXXXXXXTVVDSNTDA 298
+NEE K + + TL Y+ C L NN+L+ NWT + +
Sbjct: 142 TENEEGKRAV-YQPTLFYLMHCGKALYNNLLWRNWTPRTLQKMTIIGNSFNGIQERMLQR 200
Query: 299 FLKSNLQFLFHIKEFLEEVPVVNNFKFNDIFNDTSLHCFLPTKLNSIEQDIWDLRFLEPE 358
L+ + FL H+ EE P+ + +F D+FNDT+L F LN + + W EP
Sbjct: 201 ELERDYSFLSHMIGVCEETPLSCSSRFLDVFNDTALIQFPLEDLNKLPECTWT-EPSEPL 259
Query: 359 YTEC 362
Y C
Sbjct: 260 YQHC 263
>UNIPROTKB|E1BBB4 [details] [associations]
symbol:MRPS15 "28S ribosomal protein S15, mitochondrial"
species:9913 "Bos taurus" [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR000589
Pfam:PF00312 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:1.10.287.10 InterPro:IPR009068 SUPFAM:SSF47060
GeneTree:ENSGT00390000001737 OMA:EKTCREL EMBL:DAAA02009202
IPI:IPI00700771 UniGene:Bt.27027 Ensembl:ENSBTAT00000033238
NextBio:20868740 Uniprot:E1BBB4
Length = 256
Score = 178 (67.7 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 43/128 (33%), Positives = 66/128 (51%)
Query: 431 EYAKCESLKSADEHVKKIFSCAHRGRKQAVELVKKKHVDSVKRHDLDDTSREVLITKYTV 490
+Y ++ D+ VK++ S +K+ +++ K++ + V + D +S E I TV
Sbjct: 74 DYQNVPGIEKVDDVVKRLISLEMANKKEMLKIKKEQLMSKVVENPKDTSSLEAQIVALTV 133
Query: 491 SIRSLQEHHKAKPLDKRAKVWLKELIDKRNKHLRLLRTENYKVFEWLLDELKIVFRPGPT 550
IRS +EH + DK K +L IDKR K L+ LR NY VFE EL I + P
Sbjct: 134 KIRSYEEHMQKHQKDKAHKRYLLMSIDKRQKMLKNLRKTNYPVFEKTCKELGIEYTFPPP 193
Query: 551 ILNKVHRK 558
K+HR+
Sbjct: 194 YHRKIHRR 201
>ZFIN|ZDB-GENE-040718-188 [details] [associations]
symbol:mrps15 "mitochondrial ribosomal protein S15"
species:7955 "Danio rerio" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR000589
InterPro:IPR005290 Pfam:PF00312 PROSITE:PS00362
ZFIN:ZDB-GENE-040718-188 GO:GO:0005739 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:1.10.287.10 InterPro:IPR009068 SUPFAM:SSF47060
HAMAP:MF_01343_B TIGRFAMs:TIGR00952 eggNOG:NOG298367
GeneTree:ENSGT00390000001737 EMBL:BC076324 IPI:IPI00501401
RefSeq:NP_001002485.1 UniGene:Dr.81859 HSSP:P80378
ProteinModelPortal:Q6DGL8 STRING:Q6DGL8 Ensembl:ENSDART00000128936
GeneID:436758 KEGG:dre:436758 CTD:64960 HOGENOM:HOG000231143
InParanoid:Q6DGL8 OMA:HHKDKAN OrthoDB:EOG40K815 NextBio:20831195
Bgee:Q6DGL8 Uniprot:Q6DGL8
Length = 263
Score = 179 (68.1 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 47/148 (31%), Positives = 71/148 (47%)
Query: 411 RKSGDQILELGPLELDKPTLEYAKCESLKSADEHVKKIFSCAHRGRKQAVELVKKKHVDS 470
RK + +L L+ EYA +S D+ VKK+ + + + L +++ +
Sbjct: 69 RKKQEFPSQLEDLKTSMLKHEYASVPLAQSVDDVVKKLLTLEFANHSEKLRLKEEQLIAK 128
Query: 471 VKRHDLDDTSREVLITKYTVSIRSLQEHHKAKPLDKRAKVWLKELIDKRNKHLRLLRTEN 530
V+R + D +S EV + T IR+ QEH P DK K W+ IDKR K L+ LR
Sbjct: 129 VQRDENDRSSTEVKVAILTARIRNFQEHLHKHPKDKANKRWMLMTIDKRKKLLKFLRRTR 188
Query: 531 YKVFEWLLDELKIVFRPGPTILNKVHRK 558
Y FE + EL I + P +V R+
Sbjct: 189 YDSFEKVCKELGITYTFPPEYYRRVTRR 216
>WB|WBGene00010624 [details] [associations]
symbol:mrps-15 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] PROSITE:PS00362 GO:GO:0005739 GO:GO:0009792
GO:GO:0005840 EMBL:Z81098 Gene3D:1.10.287.10 InterPro:IPR009068
SUPFAM:SSF47060 RefSeq:NP_492351.1 ProteinModelPortal:Q9NAP9
SMR:Q9NAP9 MINT:MINT-3386096 PaxDb:Q9NAP9 EnsemblMetazoa:K07A12.7
GeneID:187087 KEGG:cel:CELE_K07A12.7 UCSC:K07A12.7 CTD:187087
WormBase:K07A12.7 eggNOG:NOG298367 GeneTree:ENSGT00390000001737
HOGENOM:HOG000019683 InParanoid:Q9NAP9 OMA:NDIGQET NextBio:934056
Uniprot:Q9NAP9
Length = 330
Score = 180 (68.4 bits), Expect = 5.0e-11, P = 5.0e-11
Identities = 62/225 (27%), Positives = 107/225 (47%)
Query: 412 KSGDQIL----ELG-P-LELDKPTLEYAKCESLKSADEHVKKIFSCAHRGRKQAVELVKK 465
K+ D ++ E G P +E K +Y + L +A E VKKIFS RK+ + K+
Sbjct: 73 KAADNLILEKTEFGLPRIEKSKTRAKYEDLDVLSNAPESVKKIFSVEMATRKELSQEWKQ 132
Query: 466 KHVDSVKRHDLDDTSREV-------LITKYTVSIRSLQEHHKAKPLDKRAKVWLKELIDK 518
+ SV++H LD+ S E+ LI +++ + + + K KP ++WL +I++
Sbjct: 133 SLIKSVRQHSLDENSLEMKIAWLTALIRHWSLLVNDIGQETKKKPTWLTHRIWL--VINE 190
Query: 519 RNKHLRLLRTENYKVFEWLLDELKIVFRPGPTILNKVHRKESLRFLVDKHIGDVKTERLT 578
R K LR+LR N FE + LKI + + RK + + + K +RL
Sbjct: 191 RRKALRILRERNETAFEKTIAALKISYHVPKQPAHVKTRKAWAEAQLKLRVENEKEKRLE 250
Query: 579 QLRNKFNQEKINFYKKKAEFLEWTMEQEKKYGKEPTVTKEEIESI 623
+L K+++E + +K++ T E+ K E +E+ I
Sbjct: 251 ELHEKYDKE-VEEHKRE------TQEKRKALNNELDKLAQEMRQI 288
>RGD|1359675 [details] [associations]
symbol:Mrps15 "mitochondrial ribosomal protein S15"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISO] [GO:0005763 "mitochondrial small ribosomal subunit"
evidence=IEA;ISO] [GO:0006412 "translation" evidence=IEA]
[GO:0031965 "nuclear membrane" evidence=IEA;ISO] InterPro:IPR000589
Pfam:PF00312 PROSITE:PS00362 RGD:1359675 GO:GO:0006412
GO:GO:0031965 GO:GO:0003735 GO:GO:0005763 Gene3D:1.10.287.10
InterPro:IPR009068 SUPFAM:SSF47060 HAMAP:MF_01343_B
eggNOG:NOG298367 GeneTree:ENSGT00390000001737 CTD:64960
HOGENOM:HOG000231143 OrthoDB:EOG40K815 OMA:EKTCREL EMBL:BC083856
IPI:IPI00365253 RefSeq:NP_001007654.1 UniGene:Rn.12127
ProteinModelPortal:Q5XI37 PhosphoSite:Q5XI37
Ensembl:ENSRNOT00000011565 GeneID:298517 KEGG:rno:298517
InParanoid:Q5XI37 NextBio:643835 Genevestigator:Q5XI37
Uniprot:Q5XI37
Length = 257
Score = 169 (64.5 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 45/145 (31%), Positives = 76/145 (52%)
Query: 437 SLKSADEHVKKIFSCAHRGRKQAVELVKKKHVDSVKRHDLDDTSREVLITKYTVSIRSLQ 496
+++ D+ VK+I S RK+ +++ +++ ++ + + D + E I TV IR+ +
Sbjct: 81 NMEKVDDVVKRILSLEMASRKEKLKIKREQLMNKIAENPEDYRTLEARIVALTVKIRNYE 140
Query: 497 EHHKAKPLDKRAKVWLKELIDKRNKHLRLLRTENYKVFEWLLDELKIVFRPGPTILNKVH 556
EH + DK K L ID+R K LRLLR NY VFE EL + + P +VH
Sbjct: 141 EHMQKHRKDKVHKRHLLMSIDQRKKFLRLLRQTNYDVFEKTCKELGVEYALPPLHFQRVH 200
Query: 557 R----KESLRFLVDKHIGDVKTERL 577
R K++L V + + +K +R+
Sbjct: 201 RRFLAKKALCIQVFQEVQKLKKQRM 225
>UNIPROTKB|I3L8X7 [details] [associations]
symbol:MRPS15 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031965 "nuclear membrane" evidence=IEA] [GO:0005763
"mitochondrial small ribosomal subunit" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000589 Pfam:PF00312
GO:GO:0006412 GO:GO:0031965 GO:GO:0003735 GO:GO:0005763
Gene3D:1.10.287.10 InterPro:IPR009068 SUPFAM:SSF47060
GeneTree:ENSGT00390000001737 OMA:EKTCREL Ensembl:ENSSSCT00000026104
Uniprot:I3L8X7
Length = 253
Score = 168 (64.2 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 42/129 (32%), Positives = 66/129 (51%)
Query: 430 LEYAKCESLKSADEHVKKIFSCAHRGRKQAVELVKKKHVDSVKRHDLDDTSREVLITKYT 489
L+Y + D+ VK++ S +K+ +++ K + ++ V + D +S E I T
Sbjct: 75 LDYQNVPGIHKVDDVVKRLLSLEMANQKEKLKIKKMQLMNKVLENPEDTSSLEARIVALT 134
Query: 490 VSIRSLQEHHKAKPLDKRAKVWLKELIDKRNKHLRLLRTENYKVFEWLLDELKIVFRPGP 549
V IR+ +EH + DK K +L ID+R K L+ LR NY VFE + EL I + P
Sbjct: 135 VKIRNYEEHMQKHRKDKAHKRFLLMSIDQRKKMLKNLRETNYAVFEKICKELGIEYTFPP 194
Query: 550 TILNKVHRK 558
K HR+
Sbjct: 195 PYHRKAHRR 203
>FB|FBgn0038582 [details] [associations]
symbol:CG7988 species:7227 "Drosophila melanogaster"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0007623 "circadian rhythm"
evidence=ISS] EMBL:AE014297 GO:GO:0007623 EMBL:AY118957
RefSeq:NP_650691.1 UniGene:Dm.20211 PRIDE:Q9VEB5
EnsemblMetazoa:FBtr0083561 GeneID:42180 KEGG:dme:Dmel_CG7988
UCSC:CG7988-RA FlyBase:FBgn0038582 eggNOG:NOG279172
GeneTree:ENSGT00390000003948 InParanoid:Q9VEB5 OMA:NSFEMLT
OrthoDB:EOG46Q588 PhylomeDB:Q9VEB5 GenomeRNAi:42180 NextBio:827543
Bgee:Q9VEB5 GermOnline:CG7988 InterPro:IPR012942 Pfam:PF07985
Uniprot:Q9VEB5
Length = 276
Score = 167 (63.8 bits), Expect = 7.2e-10, P = 7.2e-10
Identities = 53/212 (25%), Positives = 88/212 (41%)
Query: 143 RIESVKEELGSSDYYXXXXXXXXXXXXXXXXXXTTQGINQIICYGIGNFTDSIAAKYQFV 202
R+E++ E+ SDY+ + + +I+C G+G F+ + A +Q
Sbjct: 49 RLENLCTEMCQSDYFLVAMEALQQQLEGIR-----KPLERIVCLGLGPFSRTYHALHQAA 103
Query: 203 LLLLLKIEYDC-EILIYDPXXXXXXXXXXXXXXXXXXXQNEECKHTITHAKTLVYMPRCP 261
++ L + E L +DP ++ KH T TL Y+P CP
Sbjct: 104 FVIGLHRHHKIREALYFDPVFRDSEKELIRLFDGCIMSKDCAGKHEAT-VPTLYYLPHCP 162
Query: 262 IQLINNILYSNWTREXX--XXXXXXXXXXXTVVDSNTDAFLKSNLQFLFHIKEFLEEVPV 319
L++NIL+SNW RE T+ N D + I E E P+
Sbjct: 163 YALMHNILWSNWKRETLPNVFLISNSFEMLTMTPRNQD-------DHITRIVEHCTETPL 215
Query: 320 VNNFKFNDIFNDTSLHCFLPTKL-NSIEQDIW 350
++++ +++FND SLH F L S ++ W
Sbjct: 216 EDDYEHHNVFNDLSLHTFPQESLPGSNDEAFW 247
>MGI|MGI:1913657 [details] [associations]
symbol:Mrps15 "mitochondrial ribosomal protein S15"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005763 "mitochondrial small
ribosomal subunit" evidence=ISO] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] InterPro:IPR000589 Pfam:PF00312
PROSITE:PS00362 MGI:MGI:1913657 GO:GO:0005739 GO:GO:0006412
GO:GO:0031965 GO:GO:0003735 GO:GO:0005763 Gene3D:1.10.287.10
InterPro:IPR009068 SUPFAM:SSF47060 HAMAP:MF_01343_B
eggNOG:NOG298367 GeneTree:ENSGT00390000001737 CTD:64960
HOGENOM:HOG000231143 OrthoDB:EOG40K815 HOVERGEN:HBG017757
OMA:EKTCREL EMBL:AB049947 EMBL:AK003126 EMBL:AK010330 EMBL:AK008623
EMBL:AK050396 EMBL:BC029193 EMBL:BC055861 IPI:IPI00321858
RefSeq:NP_079820.2 UniGene:Mm.195628 ProteinModelPortal:Q9DC71
SMR:Q9DC71 STRING:Q9DC71 PhosphoSite:Q9DC71 PaxDb:Q9DC71
PRIDE:Q9DC71 Ensembl:ENSMUST00000030675 GeneID:66407 KEGG:mmu:66407
InParanoid:Q9DC71 NextBio:321595 Bgee:Q9DC71 CleanEx:MM_MRPS15
Genevestigator:Q9DC71 GermOnline:ENSMUSG00000028861 Uniprot:Q9DC71
Length = 258
Score = 164 (62.8 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 43/131 (32%), Positives = 68/131 (51%)
Query: 437 SLKSADEHVKKIFSCAHRGRKQAVELVKKKHVDSVKRHDLDDTSREVLITKYTVSIRSLQ 496
+++ D+ VK+I S RK+ +++ +++ ++ + + D + E I TV IR+ +
Sbjct: 82 NIEKVDDVVKRILSLEMASRKEKLKIKQEQLMNKIVENPEDSRTLEAQIIALTVRIRNYE 141
Query: 497 EHHKAKPLDKRAKVWLKELIDKRNKHLRLLRTENYKVFEWLLDELKIVFRPGPTILNKVH 556
EH + DK K L ID+R K L++LR NY VFE EL + + P KVH
Sbjct: 142 EHMQKHRKDKAHKRHLLMSIDRRKKLLKILRQTNYDVFEKTCKELGVEYTLPPLHFQKVH 201
Query: 557 RKESLRFLVDK 567
R RFL K
Sbjct: 202 R----RFLAKK 208
>UNIPROTKB|J9NTS2 [details] [associations]
symbol:MRPS15 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000589 Pfam:PF00312
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:1.10.287.10
InterPro:IPR009068 SUPFAM:SSF47060 GeneTree:ENSGT00390000001737
OMA:EKTCREL EMBL:AAEX03009633 Ensembl:ENSCAFT00000046432
Uniprot:J9NTS2
Length = 187
Score = 147 (56.8 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 51/189 (26%), Positives = 87/189 (46%)
Query: 431 EYAKCESLKSADEHVKKIFSCAHRGRKQAVELVKKKHVDSVKRHDLDDTSREVLITKYTV 490
+Y ++ D+ V+++ S +K+ +++ ++ + + + D +S E I TV
Sbjct: 12 DYQNVPDIEKVDDVVRRLLSLEMASQKEKLKIKHQQLMSKIVANPEDTSSLEARIVALTV 71
Query: 491 SIRSLQEHHKAKPLDKRAKVWLKELIDKRNKHLRLLRTENYKVFEWLLDELKIVFRPGPT 550
IR+ +EH + DK K +L ID+R K L+ LR NY VFE EL I + P
Sbjct: 72 KIRNFEEHMQKHRKDKVHKRYLLMSIDQRKKLLKNLRKTNYSVFEKTCKELGIEYTFPPL 131
Query: 551 ILNKVHRKESLRFLVDKHIGDVKTERLTQLRNKFNQEKINFYKKKAEFLEWTMEQEKKYG 610
HRK R++ K + R+ Q K ++K K KA +Q +K
Sbjct: 132 Y----HRKGHQRWVTKKAL----CIRVFQEAQKLKKQK-RALKAKAA----AQKQGQKNP 178
Query: 611 KEPTVTKEE 619
+ P+ + E
Sbjct: 179 ESPSKAEPE 187
>UNIPROTKB|P82914 [details] [associations]
symbol:MRPS15 "28S ribosomal protein S15, mitochondrial"
species:9606 "Homo sapiens" [GO:0005763 "mitochondrial small
ribosomal subunit" evidence=IDA] [GO:0006412 "translation"
evidence=NAS] [GO:0003735 "structural constituent of ribosome"
evidence=NAS] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IDA] InterPro:IPR000589 Pfam:PF00312
PROSITE:PS00362 EMBL:CH471059 GO:GO:0006412 GO:GO:0031965
GO:GO:0003735 GO:GO:0005763 Gene3D:1.10.287.10 InterPro:IPR009068
SUPFAM:SSF47060 HAMAP:MF_01343_B eggNOG:NOG298367 CTD:64960
HOGENOM:HOG000231143 OrthoDB:EOG40K815 EMBL:AB049946 EMBL:AF265439
EMBL:AK315441 EMBL:BC031336 IPI:IPI00550037 RefSeq:NP_112570.2
UniGene:Hs.352839 ProteinModelPortal:P82914 SMR:P82914
IntAct:P82914 STRING:P82914 PhosphoSite:P82914 DMDM:13633907
PaxDb:P82914 PRIDE:P82914 Ensembl:ENST00000373116 GeneID:64960
KEGG:hsa:64960 UCSC:uc001cas.2 GeneCards:GC01M036921
HGNC:HGNC:14504 HPA:HPA028100 HPA:HPA028134 MIM:611979
neXtProt:NX_P82914 PharmGKB:PA30999 HOVERGEN:HBG017757
InParanoid:P82914 OMA:EKTCREL PhylomeDB:P82914 ChiTaRS:MRPS15
GenomeRNAi:64960 NextBio:67134 ArrayExpress:P82914 Bgee:P82914
CleanEx:HS_MRPS15 Genevestigator:P82914 GermOnline:ENSG00000116898
Uniprot:P82914
Length = 257
Score = 150 (57.9 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 42/140 (30%), Positives = 70/140 (50%)
Query: 423 LELDKP--TL--EYAKCESLKSADEHVKKIFSCAHRGRKQAVELVKKKHVDSVKRHDLDD 478
L+ D P TL +Y ++ D+ VK++ S +K+ +++ +++ + + + D
Sbjct: 63 LDDDPPPSTLLKDYQNVPGIEKVDDVVKRLLSLEMANKKEMLKIKQEQFMKKIVANPEDT 122
Query: 479 TSREVLITKYTVSIRSLQEHHKAKPLDKRAKVWLKELIDKRNKHLRLLRTENYKVFEWLL 538
S E I +V IRS +EH + DK K +L ID+R K L+ LR NY VFE +
Sbjct: 123 RSLEARIIALSVKIRSYEEHLEKHRKDKAHKRYLLMSIDQRKKMLKNLRNTNYDVFEKIC 182
Query: 539 DELKIVFRPGPTILNKVHRK 558
L I + P + HR+
Sbjct: 183 WGLGIEYTFPPLYYRRAHRR 202
>MGI|MGI:1917368 [details] [associations]
symbol:Srrd "SRR1 domain containing" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0048511 "rhythmic process" evidence=IEA]
MGI:MGI:1917368 GO:GO:0048511 eggNOG:NOG279172
GeneTree:ENSGT00390000003948 InterPro:IPR012942 Pfam:PF07985
CTD:402055 HOGENOM:HOG000154422 HOVERGEN:HBG062240
OrthoDB:EOG48GW3S EMBL:AC123848 EMBL:BC030678 EMBL:BC125007
EMBL:AK012640 IPI:IPI00659252 IPI:IPI00659764 RefSeq:NP_081599.2
UniGene:Mm.172947 UniGene:Mm.486479 PhosphoSite:Q8K2M3 PRIDE:Q8K2M3
Ensembl:ENSMUST00000031289 GeneID:70118 KEGG:mmu:70118
UCSC:uc008ysz.2 InParanoid:Q8K2M3 ChiTaRS:SRRD NextBio:331024
Bgee:Q8K2M3 CleanEx:MM_SRRD Genevestigator:Q8K2M3
GermOnline:ENSMUSG00000029346 Uniprot:Q8K2M3
Length = 249
Score = 146 (56.5 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 31/96 (32%), Positives = 45/96 (46%)
Query: 184 ICYGIGNFTDSIAAKYQ--FVLLLLLKIEYD-CEILIYDPXXXXXXXXXXXXXXXXXXXQ 240
+CYG+G F A+ Q F+LL L K + +YDP +
Sbjct: 111 VCYGLGTFASCPTARIQLAFMLLFLEKCQVPRSHCWVYDPLFSQTEVSVLTSLGVTVLSE 170
Query: 241 NEECKHTITHAKTLVYMPRCPIQLINNILYSNWTRE 276
NEE K ++ T+ YMP C L NN+L+SNW+ +
Sbjct: 171 NEEGKRSVQGQPTVFYMPHCGTALYNNLLWSNWSAD 206
Score = 37 (18.1 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 6/18 (33%), Positives = 12/18 (66%)
Query: 139 SIFRRIESVKEELGSSDY 156
++ RR+ +E+L SD+
Sbjct: 41 AVLRRLREAEEDLRISDF 58
>UNIPROTKB|F1N742 [details] [associations]
symbol:F1N742 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000589 Pfam:PF00312
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:1.10.287.10
InterPro:IPR009068 SUPFAM:SSF47060 GeneTree:ENSGT00390000001737
EMBL:DAAA02042475 IPI:IPI00714074 Ensembl:ENSBTAT00000010514
OMA:PEMIKEN Uniprot:F1N742
Length = 230
Score = 139 (54.0 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 52/178 (29%), Positives = 81/178 (45%)
Query: 390 GYKQLIKIKWKRPEPVAFNDPRKSGDQILELGPLELDKPTLEYAKCESLKSADEHVKKIF 449
G+ +L+ I+W ++ + + Q E P L +Y D+ VK++
Sbjct: 29 GWAKLLSIQWDLKSWRSYPLDQTT-QQSQEDDP-PLSMLLKDYQNIPGTAKVDDVVKRLL 86
Query: 450 SCAHRGRKQAVELVKKKHVDSVKRHDLDDTSREVLITKYTVSIRSLQEHHKAKPLDKRAK 509
S +K+ +++ K++ ++ V + D +S E I V I S +EH + DK K
Sbjct: 87 SLEMANKKEMLKIKKEQLMNKVVENLKDTSSLEARIVALVVKICSYEEHRQ----DKAHK 142
Query: 510 VWLKELIDKRNKHLRLLRTENYKVFEWLLDELKI--VFRPGPTILNKVHR-KESLRFL 564
+L IDKR K LR LR NY VFE EL I F P +V + K+ R L
Sbjct: 143 HYLLMSIDKRQKMLRNLRETNYPVFEKTCKELGIEDTFPPPYHFFQEVQKLKKQKRAL 200
>TAIR|locus:2148333 [details] [associations]
symbol:SRR1 "AT5G59560" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0007623 "circadian rhythm" evidence=IMP] [GO:0009585 "red,
far-red light phototransduction" evidence=IMP] [GO:0010017 "red or
far-red light signaling pathway" evidence=IMP] [GO:0042752
"regulation of circadian rhythm" evidence=IMP] EMBL:AY127047
GO:GO:0005634 GO:GO:0005737 EMBL:CP002688 GO:GO:0007623
GO:GO:0042752 EMBL:AB025604 GO:GO:0009585 eggNOG:NOG279172
InterPro:IPR012942 Pfam:PF07985 EMBL:AY084714 EMBL:AK118532
IPI:IPI00534448 RefSeq:NP_200764.1 RefSeq:NP_851224.1
UniGene:At.28233 STRING:Q8GWZ6 EnsemblPlants:AT5G59560.1
EnsemblPlants:AT5G59560.2 GeneID:836075 KEGG:ath:AT5G59560
TAIR:At5g59560 InParanoid:Q8GWZ6 OMA:CEASLYD PhylomeDB:Q8GWZ6
ProtClustDB:PLN03093 Genevestigator:Q8GWZ6 GermOnline:AT5G59560
Uniprot:Q8GWZ6
Length = 275
Score = 114 (45.2 bits), Expect = 0.00089, P = 0.00089
Identities = 25/95 (26%), Positives = 43/95 (45%)
Query: 182 QIICYGIGNFTDSIAAKYQFVLLLLLKIEYDC---EILIYDPXXXXXXXXXXXXXXXXXX 238
Q++ YGIG+ + ++Q + +L+K E+D I ++DP
Sbjct: 102 QMVMYGIGSIESYESPRFQLSIAILMKREFDWVGDNIEVFDPVLSATESSYLESLGCSVL 161
Query: 239 XQNEECKHTITHAKTLVYMPRCPIQLINNILYSNW 273
NE+ + TL +MP C L +N+L +NW
Sbjct: 162 SVNEQARREALKP-TLFFMPHCEANLYSNLLQANW 195
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.135 0.408 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 648 557 0.00098 119 3 11 22 0.38 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 15
No. of states in DFA: 628 (67 KB)
Total size of DFA: 348 KB (2172 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 46.43u 0.10s 46.53t Elapsed: 00:00:17
Total cpu time: 46.43u 0.10s 46.53t Elapsed: 00:00:20
Start: Thu Aug 15 12:52:16 2013 End: Thu Aug 15 12:52:36 2013