Query psy5138
Match_columns 575
No_of_seqs 376 out of 3045
Neff 9.6
Searched_HMMs 29240
Date Fri Aug 16 18:17:56 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5138.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/5138hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2vig_A Short-chain specific ac 100.0 6.3E-55 2.2E-59 450.8 38.1 326 215-574 6-383 (391)
2 3pfd_A Acyl-COA dehydrogenase; 100.0 1.6E-55 5.6E-60 455.5 33.0 323 215-571 19-393 (393)
3 2jif_A Short/branched chain sp 100.0 4.1E-55 1.4E-59 453.3 35.9 325 214-573 28-404 (404)
4 1ukw_A Acyl-COA dehydrogenase; 100.0 7.7E-55 2.6E-59 448.5 36.7 323 215-571 5-378 (379)
5 1egd_A Medium chain acyl-COA d 100.0 1E-54 3.6E-59 449.9 37.7 327 215-575 16-396 (396)
6 2d29_A Acyl-COA dehydrogenase; 100.0 1.7E-54 5.9E-59 447.1 37.5 324 215-572 7-386 (387)
7 1ivh_A Isovaleryl-COA dehydrog 100.0 1.1E-54 3.7E-59 449.5 34.3 326 215-574 13-394 (394)
8 2dvl_A Acyl-COA dehydrogenase; 100.0 3.1E-54 1.1E-58 442.9 36.6 318 215-571 3-372 (372)
9 3r7k_A Probable acyl COA dehyd 100.0 2.2E-54 7.7E-59 448.2 35.9 320 215-569 29-401 (403)
10 3nf4_A Acyl-COA dehydrogenase; 100.0 2E-54 6.9E-59 446.9 33.7 322 214-571 15-387 (387)
11 3p4t_A Putative acyl-COA dehyd 100.0 6.6E-54 2.3E-58 444.7 36.9 320 215-569 26-399 (403)
12 4hr3_A Putative acyl-COA dehyd 100.0 4.1E-54 1.4E-58 448.5 34.0 327 215-575 9-414 (415)
13 1buc_A Butyryl-COA dehydrogena 100.0 7.3E-54 2.5E-58 442.1 35.0 323 215-571 5-383 (383)
14 1rx0_A Acyl-COA dehydrogenase 100.0 1.3E-53 4.4E-58 441.1 36.8 323 215-572 19-393 (393)
15 2pg0_A Acyl-COA dehydrogenase; 100.0 1.3E-53 4.6E-58 440.2 36.7 321 215-569 10-383 (385)
16 3sf6_A Glutaryl-COA dehydrogen 100.0 1.7E-53 5.7E-58 441.7 34.5 319 214-572 29-399 (403)
17 3swo_A Glutaryl-COA dehydrogen 100.0 2.2E-53 7.7E-58 440.4 34.0 319 214-572 25-394 (399)
18 3ii9_A Glutaryl-COA dehydrogen 100.0 3.7E-54 1.3E-58 445.8 27.9 322 215-572 19-392 (396)
19 3owa_A Acyl-COA dehydrogenase; 100.0 3.6E-53 1.2E-57 455.6 34.2 323 214-574 32-427 (597)
20 2ix5_A Acyl-coenzyme A oxidase 100.0 8.5E-53 2.9E-57 438.9 34.5 320 215-572 55-425 (436)
21 2eba_A Putative glutaryl-COA d 100.0 1.2E-52 4.1E-57 433.1 35.0 318 215-571 11-381 (385)
22 3mpi_A Glutaryl-COA dehydrogen 100.0 8.4E-53 2.9E-57 436.3 31.3 321 214-569 4-382 (397)
23 1r2j_A Protein FKBI; polyketid 100.0 5E-53 1.7E-57 432.7 28.7 309 227-572 3-364 (366)
24 1siq_A GCD, glutaryl-COA dehyd 100.0 2.2E-51 7.6E-56 424.6 34.7 318 215-571 14-384 (392)
25 2wbi_A Acyl-COA dehydrogenase 100.0 1E-51 3.6E-56 431.3 32.3 326 215-574 23-421 (428)
26 2z1q_A Acyl-COA dehydrogenase; 100.0 2.1E-51 7E-56 442.6 32.3 322 214-573 27-416 (577)
27 3mkh_A Nitroalkane oxidase; ox 100.0 4.3E-50 1.5E-54 421.2 31.7 323 215-572 7-417 (438)
28 2c12_A Nitroalkane oxidase; ox 100.0 5.6E-49 1.9E-53 412.6 32.8 322 215-570 6-418 (439)
29 2uxw_A VERY-long-chain specifi 100.0 6E-49 2E-53 424.0 33.6 310 226-569 59-428 (607)
30 3mxl_A Nitrososynthase; flavin 100.0 4E-47 1.4E-51 393.8 23.8 314 213-571 7-393 (395)
31 2or0_A Hydroxylase; APC7385, r 100.0 1.1E-46 3.8E-51 392.3 25.9 311 214-573 17-403 (414)
32 2jbr_A P-hydroxyphenylacetate 100.0 5.7E-46 2E-50 387.7 26.6 304 221-573 39-416 (422)
33 2rfq_A 3-HSA hydroxylase, oxyg 100.0 7.2E-46 2.5E-50 384.2 26.8 300 226-572 14-387 (394)
34 3m9v_A FAD-dependent oxidoredu 100.0 9.6E-46 3.3E-50 388.2 28.0 314 214-572 19-405 (439)
35 1w07_A Acyl-COA oxidase; oxido 100.0 5.3E-45 1.8E-49 397.4 27.5 280 263-574 114-443 (659)
36 3djl_A Protein AIDB; alpha hel 100.0 8.4E-44 2.9E-48 378.0 29.5 267 265-572 150-442 (541)
37 2ddh_A Acyl-COA oxidase; beta 100.0 8E-44 2.7E-48 387.3 27.3 281 262-574 114-440 (661)
38 3owa_A Acyl-COA dehydrogenase; 100.0 1.9E-37 6.7E-42 333.3 36.5 396 2-497 131-550 (597)
39 1ukw_A Acyl-COA dehydrogenase; 100.0 1.3E-37 4.5E-42 320.0 28.4 228 2-236 102-330 (379)
40 2d29_A Acyl-COA dehydrogenase; 100.0 2.4E-37 8.3E-42 318.9 30.0 227 2-235 105-336 (387)
41 2jif_A Short/branched chain sp 100.0 1.7E-37 5.7E-42 321.3 28.6 227 2-235 127-353 (404)
42 3r7k_A Probable acyl COA dehyd 100.0 2.3E-37 7.8E-42 320.6 29.5 226 2-235 128-354 (403)
43 3p4t_A Putative acyl-COA dehyd 100.0 3.1E-37 1.1E-41 319.5 29.7 226 2-235 125-352 (403)
44 1buc_A Butyryl-COA dehydrogena 100.0 3E-37 1E-41 317.9 28.9 227 2-235 106-334 (383)
45 1egd_A Medium chain acyl-COA d 100.0 4.8E-37 1.6E-41 317.6 30.2 228 2-236 113-344 (396)
46 2vig_A Short-chain specific ac 100.0 3.8E-37 1.3E-41 317.8 29.1 227 2-235 104-331 (391)
47 3pfd_A Acyl-COA dehydrogenase; 100.0 2.5E-37 8.6E-42 319.3 26.5 217 2-223 116-334 (393)
48 2pg0_A Acyl-COA dehydrogenase; 100.0 4.9E-37 1.7E-41 316.4 28.3 228 2-236 107-337 (385)
49 3nf4_A Acyl-COA dehydrogenase; 100.0 8.9E-37 3.1E-41 314.9 30.1 225 2-235 113-338 (387)
50 1ivh_A Isovaleryl-COA dehydrog 100.0 4.7E-37 1.6E-41 317.4 27.9 228 2-236 113-343 (394)
51 2dvl_A Acyl-COA dehydrogenase; 100.0 1.2E-36 4.2E-41 312.0 29.2 222 2-235 101-323 (372)
52 1r2j_A Protein FKBI; polyketid 100.0 5.4E-37 1.8E-41 313.8 26.3 223 2-235 90-314 (366)
53 3sf6_A Glutaryl-COA dehydrogen 100.0 1.3E-36 4.3E-41 315.0 29.1 221 2-235 128-349 (403)
54 4hr3_A Putative acyl-COA dehyd 100.0 1.6E-36 5.6E-41 315.7 28.5 227 2-235 126-361 (415)
55 3swo_A Glutaryl-COA dehydrogen 100.0 2.1E-36 7E-41 313.1 29.0 222 2-236 123-345 (399)
56 3ii9_A Glutaryl-COA dehydrogen 100.0 1.8E-36 6.1E-41 313.3 28.5 226 2-236 117-343 (396)
57 2z1q_A Acyl-COA dehydrogenase; 100.0 2.3E-34 8E-39 309.8 43.9 202 2-212 126-330 (577)
58 2ix5_A Acyl-coenzyme A oxidase 100.0 4.7E-36 1.6E-40 312.6 29.5 223 2-235 152-375 (436)
59 3mpi_A Glutaryl-COA dehydrogen 100.0 2.3E-36 8E-41 312.8 26.2 226 2-235 106-334 (397)
60 1rx0_A Acyl-COA dehydrogenase 100.0 6.5E-36 2.2E-40 308.6 28.5 226 2-235 116-343 (393)
61 2eba_A Putative glutaryl-COA d 100.0 1.1E-35 3.8E-40 306.3 29.4 223 2-236 109-333 (385)
62 2uxw_A VERY-long-chain specifi 100.0 4.8E-35 1.7E-39 315.7 35.6 217 2-223 146-371 (607)
63 2wbi_A Acyl-COA dehydrogenase 100.0 5E-36 1.7E-40 312.8 25.9 217 2-223 132-359 (428)
64 2yyk_A 4-hydroxyphenylacetate- 100.0 5.6E-36 1.9E-40 313.8 25.3 290 265-568 123-455 (481)
65 1u8v_A Gamma-aminobutyrate met 100.0 6.5E-36 2.2E-40 313.6 24.8 247 262-516 123-404 (490)
66 1siq_A GCD, glutaryl-COA dehyd 100.0 5.5E-35 1.9E-39 301.9 28.0 222 2-235 111-335 (392)
67 3mkh_A Nitroalkane oxidase; ox 100.0 1.2E-33 4E-38 296.3 27.4 207 2-214 111-343 (438)
68 2c12_A Nitroalkane oxidase; ox 100.0 1.7E-33 5.7E-38 295.0 26.8 208 2-214 109-346 (439)
69 3djl_A Protein AIDB; alpha hel 100.0 1.7E-31 5.8E-36 283.5 25.4 197 3-213 150-366 (541)
70 3hwc_A Chlorophenol-4-monooxyg 100.0 2.8E-31 9.5E-36 277.3 23.4 245 265-519 132-403 (515)
71 2ddh_A Acyl-COA oxidase; beta 100.0 3.6E-31 1.2E-35 287.9 25.0 204 2-210 116-353 (661)
72 1w07_A Acyl-COA oxidase; oxido 100.0 3.6E-31 1.2E-35 288.5 22.5 204 2-210 115-356 (659)
73 3mxl_A Nitrososynthase; flavin 100.0 6.5E-31 2.2E-35 272.1 19.0 195 2-211 109-309 (395)
74 2rfq_A 3-HSA hydroxylase, oxyg 100.0 2.8E-30 9.6E-35 267.1 20.4 194 2-215 101-314 (394)
75 3m9v_A FAD-dependent oxidoredu 100.0 3.6E-30 1.2E-34 269.9 21.0 195 2-211 120-320 (439)
76 2or0_A Hydroxylase; APC7385, r 100.0 5E-30 1.7E-34 266.7 20.1 194 2-215 114-329 (414)
77 2jbr_A P-hydroxyphenylacetate 100.0 4.8E-30 1.6E-34 267.4 19.4 194 2-215 129-342 (422)
78 2yyk_A 4-hydroxyphenylacetate- 100.0 1.1E-28 3.7E-33 258.6 24.3 219 3-235 123-372 (481)
79 1u8v_A Gamma-aminobutyrate met 100.0 3.3E-28 1.1E-32 255.2 22.5 211 3-224 128-371 (490)
80 4g5e_A 2,4,6-trichlorophenol 4 100.0 5E-27 1.7E-31 245.6 24.4 291 266-567 134-460 (517)
81 3hwc_A Chlorophenol-4-monooxyg 100.0 5.7E-27 1.9E-31 244.8 24.5 210 3-225 132-368 (515)
82 4g5e_A 2,4,6-trichlorophenol 4 99.9 3.7E-21 1.3E-25 201.3 24.5 195 5-209 135-348 (517)
No 1
>2vig_A Short-chain specific acyl-COA dehydrogenase,; fatty acid metabolism, FAD, polymorphism, flavoprotein, mitochondrion, disease mutation; HET: FAD COS; 1.9A {Homo sapiens} PDB: 1jqi_A*
Probab=100.00 E-value=6.3e-55 Score=450.80 Aligned_cols=326 Identities=39% Similarity=0.634 Sum_probs=310.7
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhhHHHhchhcCCccHHHHHHHHHhCC--------------------------------
Q psy5138 215 FIKQASMAKYFASVAKLAKETIAPYVQKMESEEKIDETVLKTLFESGL-------------------------------- 262 (575)
Q Consensus 215 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~G~-------------------------------- 262 (575)
+++++.+++ ..+++|+.+.+.+.+.+.|+.+.+|+++|++|.+.||
T Consensus 6 ~~~~~~~l~--~~~r~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eel~~~~~~ 83 (391)
T 2vig_A 6 LPETHQMLL--QTCRDFAEKELFPIAAQVDKEHLFPAAQVKKMGGLGLLAMDVPEELGGAGLDYLAYAIAMEEISRGCAS 83 (391)
T ss_dssp CCHHHHHHH--HHHHHHHHHHTTTTHHHHHHHTCCCHHHHHHHHHHTTTSTTSCGGGTSCCCCHHHHHHHHHHHHHHCHH
T ss_pred CCHHHHHHH--HHHHHHHHHhCcccHHHHHhcCCCCHHHHHHHHHCCCCCCCCCHhhCCCCCCHHHHHHHHHHHHhhccH
Confidence 467777888 8999999999998888899999999999999999997
Q ss_pred -------------------CCHHHHHhcccc-cCCCceeEEeecCCCCCCccccceeEEEEeCCEEEEeeeeccccCCcc
Q psy5138 263 -------------------GTTEQKEKYLPR-LAQTDAGSFALSEPGSGSDAFAMKTTATKDGNHYILNGSKMWISNADI 322 (575)
Q Consensus 263 -------------------g~~~~~~~~l~~-~~~~~~~~~~~te~~~gs~~~~~~~~a~~~~~g~~l~G~k~~~s~~~~ 322 (575)
|+++|+++||++ ++|+.++++++|||++|||...+.|+|++++|||+|||+|.|+||+.+
T Consensus 84 ~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~ 163 (391)
T 2vig_A 84 TGVIMSVNNSLYLGPILKFGSKEQKQAWVTPFTSGDKIGCFALSEPGNGSDAGAASTTARAEGDSWVLNGTKAWITNAWE 163 (391)
T ss_dssp HHHHHHHHHHTTHHHHHHHCCHHHHHHHTGGGSSSSCCEEEECCBTTBSSSGGGCCCEEEEETTEEEEEEEEEEEETTTT
T ss_pred HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhCCCceEEEEecCCCCCCCcccceeEEEEeCCEEEEeeEEEeecCCCc
Confidence 899999999999 899999999999999999999999999999999999999999999999
Q ss_pred ccEEEEEEEeCCCCCCCceEEEEEeCCCCCeeecccCccCCCCCccceeEEEcceeeCCCCcccCCCchHHHHHHHHhhh
Q psy5138 323 ANIFLVMANVDVSKGYRGITCFIVERSMEGFSVGKKENKLGMKASGTCSLHFDNVRVPEENIISGVGEGYKIAAGFLNQG 402 (575)
Q Consensus 323 a~~~~v~a~~~~~~~~~~~~~~lv~~~~~gv~i~~~~~~~G~rg~~s~~l~f~~v~Vp~~~~l~~~~~~~~~~~~~~~~~ 402 (575)
|||++|.+++++++++.++++|+||++.|||++.+.|+++|+++++++++.||||+||++++||.++.|+......+...
T Consensus 164 Ad~~~v~a~~~~~~~~~g~~~flV~~~~pGv~v~~~~~~~g~r~~~~~~v~fd~v~Vp~~~~lg~~g~g~~~~~~~l~~~ 243 (391)
T 2vig_A 164 ASAAVVFASTDRALQNKSISAFLVPMPTPGLTLGKKEDKLGIRGSSTANLIFEDCRIPKDSILGEPGMGFKIAMQTLDMG 243 (391)
T ss_dssp CSEEEEEEECCSSSTTSCEEEEEEESSCTTEEECCCCCBSSCTTSCEEEEEEEEEEEEGGGEESSTTBHHHHHHHHHHHH
T ss_pred CCEEEEEEEeCCCCCCCceEEEEEeCCCCCeEecCccccccCCCCCeeEEEECcEEECHHHcCCCCCchHHHHHHHHHHH
Confidence 99999999987544556799999999999999999999999999999999999999999999999999999888889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhccccCccCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHH
Q psy5138 403 RIGIAAQMTGLAQGCLDATIPYTLERSQFGHRIFDFQSVQHQISQAATQVECARLLTYNAARLLEAGQPFIKQASMAKYF 482 (575)
Q Consensus 403 r~~~~a~~~G~~~~al~~~~~~~~~r~~~g~~l~~~~~~~~~la~~~~~~~aar~~~~~a~~~~~~~~~~~~~~~~ak~~ 482 (575)
|+.+++.++|+++++++.+++|+++|++||+||+++|.+|++|++|.++++++|++++++++.++.+.+....++++|++
T Consensus 244 r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~~i~~~q~v~~~la~~~~~~~aar~~~~~aa~~~~~g~~~~~~~~~aK~~ 323 (391)
T 2vig_A 244 RIGIASQALGIAQTALDCAVNYAENRMAFGAPLTKLQVIQFKLADMALALESARLLTWRAAMLKDNKKPFIKEAAMAKLA 323 (391)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCccCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999877777789999999
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCcCCcchhhhhhhhcccccccccccccccccccCCChHHHHhhhhccceeccchHHHHH
Q psy5138 483 ASEMAGHITRQCIDWMGGLGFTKDYPQEKFYRDCKMAGHITRQCIDWMGGLGFTKDYPQEKYYRDCKVGTIYEGTSNIQL 562 (575)
Q Consensus 483 ~~~~~~~~~~~~~~~~G~~~~~~~~p~~R~~RD~~~~~~~~~~~~~~~Gg~g~~~~~~~~~~~rd~~~~~~~~G~~~~~~ 562 (575)
+++.+.++++.++|+ |||.||+.++++++++||++...+++|++++++
T Consensus 324 a~~~a~~~~~~a~q~--------------------------------~Gg~g~~~~~~~~r~~Rda~~~~i~~G~~~~~~ 371 (391)
T 2vig_A 324 ASEAATAISHQAIQI--------------------------------LGGMGYVTEMPAERHYRDARITEIYEGTSEIQR 371 (391)
T ss_dssp HHHHHHHHHHHHHHH--------------------------------HGGGGGBTTSSHHHHHHHHHHHTTTTSCHHHHH
T ss_pred HHHHHHHHHHHHHHh--------------------------------hCCeEecCCChHHHHHHHhhcceeecCHHHHHH
Confidence 999999999999999 999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhc
Q psy5138 563 STIAKYIAKEYT 574 (575)
Q Consensus 563 ~~i~~~~~~~~~ 574 (575)
..|++.++++|.
T Consensus 372 ~~ia~~~l~~~~ 383 (391)
T 2vig_A 372 LVIAGHLLRSYR 383 (391)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHhhcc
Confidence 999999999885
No 2
>3pfd_A Acyl-COA dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: FDA; 2.10A {Mycobacterium thermoresistibile}
Probab=100.00 E-value=1.6e-55 Score=455.46 Aligned_cols=323 Identities=40% Similarity=0.655 Sum_probs=305.6
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhhHHHhchhcCCccHHHHHHHHHhCC--------------------------------
Q psy5138 215 FIKQASMAKYFASVAKLAKETIAPYVQKMESEEKIDETVLKTLFESGL-------------------------------- 262 (575)
Q Consensus 215 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~G~-------------------------------- 262 (575)
+++++.+++ +.+++|+.+.+.+.+.+.|+.+.+|+++|++|.+.||
T Consensus 19 ~~~e~~~l~--~~~r~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~G~~~~~~P~~~GG~g~~~~~~~~v~eela~~~~~ 96 (393)
T 3pfd_A 19 LPEEHIALR--EAIRALAEKEIAPYAAEVDEKARFPEEALAALNSSGFSAIHVPEEYGGQGADSVATCIVIEEVARVDCS 96 (393)
T ss_dssp ---CHHHHH--HHHHHHHHHHTGGGHHHHHHTTCCCHHHHHHHHHHTCSCTTSCGGGTCCCCCHHHHHHHHHHHHTTCHH
T ss_pred CCHHHHHHH--HHHHHHHHHhCchHHHHHhhhCCCCHHHHHHHHHCCCCCCCCChhHCCCCCCHHHHHHHHHHHHhhCch
Confidence 467788888 9999999999999999999999999999999999998
Q ss_pred ------------------CCHHHHHhcccc-cCCCceeEEeecCCCCCCccccceeEEEEeCCEEEEeeeeccccCCccc
Q psy5138 263 ------------------GTTEQKEKYLPR-LAQTDAGSFALSEPGSGSDAFAMKTTATKDGNHYILNGSKMWISNADIA 323 (575)
Q Consensus 263 ------------------g~~~~~~~~l~~-~~~~~~~~~~~te~~~gs~~~~~~~~a~~~~~g~~l~G~k~~~s~~~~a 323 (575)
|+++|+++||++ ++|+.++++++|||++|||...+.|+|++++|||+|||+|.|+||+.+|
T Consensus 97 ~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~A 176 (393)
T 3pfd_A 97 ASLIPAVNKLGTMGLILRGSEELKKQVLPAVASGEAMASYALSEREAGSDAASMRTRAVADGDDWILNGSKCWITNGGKS 176 (393)
T ss_dssp HHHHHHHHHHTTHHHHHHCCHHHHHHHHHHHHTTSCCEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEEETTTTC
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhCCCceeEEEEcCCCCCCCcccCeeEEEEcCCEEEEeeEEEEecCCccc
Confidence 899999999999 8999999999999999999999999999999999999999999999999
Q ss_pred cEEEEEEEeCCCCCCCceEEEEEeCCCCCeeecccCccCCCCCccceeEEEcceeeCCCCcccCCCchHHHHHHHHhhhH
Q psy5138 324 NIFLVMANVDVSKGYRGITCFIVERSMEGFSVGKKENKLGMKASGTCSLHFDNVRVPEENIISGVGEGYKIAAGFLNQGR 403 (575)
Q Consensus 324 ~~~~v~a~~~~~~~~~~~~~~lv~~~~~gv~i~~~~~~~G~rg~~s~~l~f~~v~Vp~~~~l~~~~~~~~~~~~~~~~~r 403 (575)
||++|.++++++++..++++|+||++.|||++.+.|+++|+++++++++.||||+||++++||.++.|+......+...|
T Consensus 177 d~~~v~a~~~~~~~~~g~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fddv~Vp~~~~lg~~g~g~~~~~~~l~~~r 256 (393)
T 3pfd_A 177 TWYTVMAVTDPDKGANGISAFMVHKDDEGFTVGPKERKLGIKGSPTTELYFENCRIPGDRIIGEPGTGFKTALATLDHTR 256 (393)
T ss_dssp SEEEEEEESCGGGGGGGEEEEEEETTSTTEEEEEECCBSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHHHHTTH
T ss_pred CEEEEEEEeCCCCCCCceEEEEEECCCCCeEecCCCCcccCCCCCceEEEEccEEEcHHHcCCCCCchHHHHHHHHHHHH
Confidence 99999999876555678999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccccCccCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC-cHHHHHHHHHH
Q psy5138 404 IGIAAQMTGLAQGCLDATIPYTLERSQFGHRIFDFQSVQHQISQAATQVECARLLTYNAARLLEAGQP-FIKQASMAKYF 482 (575)
Q Consensus 404 ~~~~a~~~G~~~~al~~~~~~~~~r~~~g~~l~~~~~~~~~la~~~~~~~aar~~~~~a~~~~~~~~~-~~~~~~~ak~~ 482 (575)
+.+++.++|+++++++.+++|+++|++||+||+++|.+|++|++|.++++++|++++++++.++.+.+ .....+++|++
T Consensus 257 ~~~aa~~~G~a~~al~~a~~~a~~R~~fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~~~~~~~~~~~~aK~~ 336 (393)
T 3pfd_A 257 PTIGAQAVGIAQGALDAAIAYTKERKQFGRPVSDNQGVQFMLADMAMKIEAARLMVYSAAARAERGEGDLGFISAASKCF 336 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----CHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999998766 56788999999
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCcCCcchhhhhhhhcccccccccccccccccccCCChHHHHhhhhccceeccchHHHHH
Q psy5138 483 ASEMAGHITRQCIDWMGGLGFTKDYPQEKFYRDCKMAGHITRQCIDWMGGLGFTKDYPQEKYYRDCKVGTIYEGTSNIQL 562 (575)
Q Consensus 483 ~~~~~~~~~~~~~~~~G~~~~~~~~p~~R~~RD~~~~~~~~~~~~~~~Gg~g~~~~~~~~~~~rd~~~~~~~~G~~~~~~ 562 (575)
+++.+.++++.++|+ |||.||+.+++++++|||++...+++|++++++
T Consensus 337 a~~~a~~~~~~a~q~--------------------------------~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~ei~~ 384 (393)
T 3pfd_A 337 ASDVAMEVTTDAVQL--------------------------------FGGYGYTQDFPVERMMRDAKITQIYEGTNQIQR 384 (393)
T ss_dssp HHHHHHHHHHHHHHH--------------------------------TGGGGGBTTSSHHHHHHHHHHHTTSSSCHHHHH
T ss_pred HHHHHHHHHHHHHHH--------------------------------hchhhccCCChHHHHHHhhcceeeecCHHHHHH
Confidence 999999999999999 999999999999999999999999999999999
Q ss_pred HHHHHHHHh
Q psy5138 563 STIAKYIAK 571 (575)
Q Consensus 563 ~~i~~~~~~ 571 (575)
..|+|.+++
T Consensus 385 ~~ia~~ll~ 393 (393)
T 3pfd_A 385 VVMSRALLR 393 (393)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHHhC
Confidence 999999875
No 3
>2jif_A Short/branched chain specific acyl-COA dehydrogen; mitochondrion, oxidoreductase, transit peptide, fatty acid metabolism, FAD, flavoprotein; HET: FAD COS; 2.0A {Homo sapiens}
Probab=100.00 E-value=4.1e-55 Score=453.31 Aligned_cols=325 Identities=63% Similarity=1.062 Sum_probs=308.6
Q ss_pred CchHHHHHHHHHHHHHHHHHHHhhhHHHhchhcCCccHHHHHHHHHhCC-------------------------------
Q psy5138 214 PFIKQASMAKYFASVAKLAKETIAPYVQKMESEEKIDETVLKTLFESGL------------------------------- 262 (575)
Q Consensus 214 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~G~------------------------------- 262 (575)
.+++++.+++ +.+++|+.+.+.+...+.|+.+.+|+++|++|.+.||
T Consensus 28 ~~~~e~~~l~--~~~r~~~~~~~~p~~~~~d~~~~~~~~~~~~l~e~Gl~~l~~P~e~GG~g~~~~~~~~v~eel~~~~~ 105 (404)
T 2jif_A 28 TFTDEEMMIK--SSVKKFAQEQIAPLVSTMDENSKMEKSVIQGLFQQGLMGIEVDPEYGGTGASFLSTVLVIEELAKVDA 105 (404)
T ss_dssp CCCHHHHHHH--HHHHHHHHHHTGGGHHHHHHHTCCCHHHHHHHHHTTTTSSSSCGGGTCCCCCHHHHHHHHHHHHTTCH
T ss_pred CCCHHHHHHH--HHHHHHHHHhCcccHHHHhhcCCCCHHHHHHHHHCCCCccCCchhhCCCCCCHHHHHHHHHHHHhcCc
Confidence 3578888888 9999999999999888899999999999999999998
Q ss_pred --------------------CCHHHHHhcccc-cCCCceeEEeecCCCCCCccccceeEEEEeCCEEEEeeeeccccCCc
Q psy5138 263 --------------------GTTEQKEKYLPR-LAQTDAGSFALSEPGSGSDAFAMKTTATKDGNHYILNGSKMWISNAD 321 (575)
Q Consensus 263 --------------------g~~~~~~~~l~~-~~~~~~~~~~~te~~~gs~~~~~~~~a~~~~~g~~l~G~k~~~s~~~ 321 (575)
|+++|+++|||+ +.+ .++++++|||++|||...+.|+|++++|||+|||+|.|+||+.
T Consensus 106 ~~~~~~~~~~~~~~~~l~~~g~~~qk~~~l~~~~~g-~~~~~a~tEp~~Gsd~~~~~t~A~~~g~g~vlnG~K~~is~a~ 184 (404)
T 2jif_A 106 SVAVFCEIQNTLINTLIRKHGTEEQKATYLPQLTTE-KVGSFCLSEAGAGSDSFALKTRADKEGDYYVLNGSKMWISSAE 184 (404)
T ss_dssp HHHHHHHHHHHTHHHHHHHHCCHHHHHHHHHHHHHT-CCEEEECCBTTBSSSGGGCCCEEEEETTEEEEEEEEEEEETTT
T ss_pred HHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhCC-CcceEEecCCCCCCChhhceeEEEEeCCEEEEEeEEEeecCCc
Confidence 899999999999 665 5889999999999999999999999999999999999999999
Q ss_pred cccEEEEEEEeCCCCCCCceEEEEEeCCCCCeeecccCccCCCCCccceeEEEcceeeCCCCcccCCCchHHHHHHHHhh
Q psy5138 322 IANIFLVMANVDVSKGYRGITCFIVERSMEGFSVGKKENKLGMKASGTCSLHFDNVRVPEENIISGVGEGYKIAAGFLNQ 401 (575)
Q Consensus 322 ~a~~~~v~a~~~~~~~~~~~~~~lv~~~~~gv~i~~~~~~~G~rg~~s~~l~f~~v~Vp~~~~l~~~~~~~~~~~~~~~~ 401 (575)
+||+++|.++++++++..++++|+||++.|||++.+.|+++|+++++++++.||||+||++++||.++.|+......+..
T Consensus 185 ~Ad~~~v~ar~~~~~~~~g~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~g~g~~~~~~~l~~ 264 (404)
T 2jif_A 185 HAGLFLVMANVDPTIGYKGITSFLVDRDTPGLHIGKPENKLGLRASSTCPLTFENVKVPEANILGQIGHGYKYAIGSLNE 264 (404)
T ss_dssp TCSEEEEEEESCGGGGGGGEEEEEEETTCTTEEECCCCCBSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHHHHH
T ss_pred ccCEEEEEEEeCCCCCCCceEEEEEecCCCCeEeccCcccccCCCCceEEEEEccEEECHHHcCCCCCchHHHHHHHHHH
Confidence 99999999998654445678999999999999999999999999999999999999999999999999999988888999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhccccCccCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHH
Q psy5138 402 GRIGIAAQMTGLAQGCLDATIPYTLERSQFGHRIFDFQSVQHQISQAATQVECARLLTYNAARLLEAGQPFIKQASMAKY 481 (575)
Q Consensus 402 ~r~~~~a~~~G~~~~al~~~~~~~~~r~~~g~~l~~~~~~~~~la~~~~~~~aar~~~~~a~~~~~~~~~~~~~~~~ak~ 481 (575)
.|+.+++.++|+++++++.+++|+++|++||+||.++|.+|++|++|.++++++|++++++++.++.+.+....++++|+
T Consensus 265 ~r~~~aa~~~G~a~~al~~a~~ya~~R~~fG~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~g~~~~~~~~~aK~ 344 (404)
T 2jif_A 265 GRIGIAAQMLGLAQGCFDYTIPYIKERIQFGKRLFDFQGLQHQVAHVATQLEAARLLTYNAARLLEAGKPFIKEASMAKY 344 (404)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999988777778999999
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCcCCcchhhhhhhhcccccccccccccccccccCCChHHHHhhhhccceeccchHHHH
Q psy5138 482 FASEMAGHITRQCIDWMGGLGFTKDYPQEKFYRDCKMAGHITRQCIDWMGGLGFTKDYPQEKYYRDCKVGTIYEGTSNIQ 561 (575)
Q Consensus 482 ~~~~~~~~~~~~~~~~~G~~~~~~~~p~~R~~RD~~~~~~~~~~~~~~~Gg~g~~~~~~~~~~~rd~~~~~~~~G~~~~~ 561 (575)
++++.+.++++.++|+ |||.||+.++++++++||++...+++|+++++
T Consensus 345 ~a~e~a~~v~~~a~q~--------------------------------~Gg~G~~~~~~~~r~~Rda~~~~i~~Gt~ei~ 392 (404)
T 2jif_A 345 YASEIAGQTTSKCIEW--------------------------------MGGVGYTKDYPVEKYFRDAKIGTIYEGASNIQ 392 (404)
T ss_dssp HHHHHHHHHHHHHHHH--------------------------------HGGGGGBTTSSHHHHHHHHGGGGTTTSCHHHH
T ss_pred HHHHHHHHHHHHHHHh--------------------------------cCcceecCCCcHHHHHhhccceeecCCHHHHH
Confidence 9999999999999999 99999999999999999999999999999999
Q ss_pred HHHHHHHHHhhh
Q psy5138 562 LSTIAKYIAKEY 573 (575)
Q Consensus 562 ~~~i~~~~~~~~ 573 (575)
+..|++.++++|
T Consensus 393 ~~~ia~~~~~~~ 404 (404)
T 2jif_A 393 LNTIAKHIDAEY 404 (404)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHhhcC
Confidence 999999999886
No 4
>1ukw_A Acyl-COA dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: FAD; 2.40A {Thermus thermophilus} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=7.7e-55 Score=448.48 Aligned_cols=323 Identities=41% Similarity=0.650 Sum_probs=307.9
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhhHHHhchhcCCccHHHHHHHHHhCC--------------------------------
Q psy5138 215 FIKQASMAKYFASVAKLAKETIAPYVQKMESEEKIDETVLKTLFESGL-------------------------------- 262 (575)
Q Consensus 215 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~G~-------------------------------- 262 (575)
+++++.+++ ..+++|+.+.+.+.+.+.|+.+.+|+++|++|.+.||
T Consensus 5 ~~~~~~~l~--~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~~~eel~~~~~~ 82 (379)
T 1ukw_A 5 LTEEQRQLQ--ALARRFAKEVILPVAQEYDEKEEVPWPVIEKLHEVGLLNAIIPEEYGGMGLKMLDEVIVGEELAYACMG 82 (379)
T ss_dssp CCHHHHHHH--HHHHHHHHHTTGGGHHHHHHHTCCCHHHHHHHHHTTCTTTTSCGGGTSCCCCHHHHHHHHHHHHHHCHH
T ss_pred CCHHHHHHH--HHHHHHHHHhCchhHHHHhhcCCCCHHHHHHHHHCCCCCcCCChhhCCCCCCHHHHHHHHHHHHHhCch
Confidence 467788888 8999999999999888899999999999999999998
Q ss_pred ------------------CCHHHHHhcccc-cCCCceeEEeecCCCCCCccccceeEEEEeCCEEEEeeeeccccCCccc
Q psy5138 263 ------------------GTTEQKEKYLPR-LAQTDAGSFALSEPGSGSDAFAMKTTATKDGNHYILNGSKMWISNADIA 323 (575)
Q Consensus 263 ------------------g~~~~~~~~l~~-~~~~~~~~~~~te~~~gs~~~~~~~~a~~~~~g~~l~G~k~~~s~~~~a 323 (575)
|+++|+++||++ ++|+.++++++|||++|||...+.|+|++++|||+|||+|.|+||+.+|
T Consensus 83 ~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~A 162 (379)
T 1ukw_A 83 IYTIPMASDLGITPVLLAGTEEQKERFLRPLTEKPALAAFALSEPGNGSDAAALKTRAIRQGDHYVLNGTKMWISNGGEA 162 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHCCHHHHHHHHGGGTSSSCEEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEEETTTTE
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhCCCceEEEEecCCCCCcChhhCeEEEEEeCCEEEEEEEEecccCCCcC
Confidence 899999999999 8999999999999999999999999999999999999999999999999
Q ss_pred cEEEEEEEeCCCCCCCceEEEEEeCCCCCeeecccCccCCCCCccceeEEEcceeeCCCCcccCCCchHHHHHHHHhhhH
Q psy5138 324 NIFLVMANVDVSKGYRGITCFIVERSMEGFSVGKKENKLGMKASGTCSLHFDNVRVPEENIISGVGEGYKIAAGFLNQGR 403 (575)
Q Consensus 324 ~~~~v~a~~~~~~~~~~~~~~lv~~~~~gv~i~~~~~~~G~rg~~s~~l~f~~v~Vp~~~~l~~~~~~~~~~~~~~~~~r 403 (575)
||++|.+++++++++.++++|+||++.|||++.+.|+++|+++++++++.||||+||++++||.++.|+......+...|
T Consensus 163 d~~~v~a~~~~~~~~~g~~~flV~~~~~Gv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~~g~~~~~~~l~~~r 242 (379)
T 1ukw_A 163 EWVVVFATVNPELRHKGVVALVVERGTPGFKAIKIHGKMGQRASGTYELVFEDVKVPVENRLGEEGEGFKIAMQTLNKTR 242 (379)
T ss_dssp EEEEEEEESCGGGGGGGEEEEEEETTCTTEEEEECCCCSSCTTSCEEEEEEEEEEEEGGGEESCTTCHHHHHHHHHHHHH
T ss_pred CEEEEEEEcCCCCCCCceEEEEEeCCCCCeEecCccccccCCCCCeeEEEEeeEEecHHhcCCCCCchHHHHHHHHHHHH
Confidence 99999999865444567899999999999999999999999999999999999999999999999999998888899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccccCccCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Q psy5138 404 IGIAAQMTGLAQGCLDATIPYTLERSQFGHRIFDFQSVQHQISQAATQVECARLLTYNAARLLEAGQPFIKQASMAKYFA 483 (575)
Q Consensus 404 ~~~~a~~~G~~~~al~~~~~~~~~r~~~g~~l~~~~~~~~~la~~~~~~~aar~~~~~a~~~~~~~~~~~~~~~~ak~~~ 483 (575)
+.+++.++|+++++++.+++|+++|++||+||.++|.+|++|++|.++++++|++++++++.++.+.+....++++|.++
T Consensus 243 ~~~aa~~~G~a~~al~~~~~ya~~R~~fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~g~~~~~~~~~aK~~a 322 (379)
T 1ukw_A 243 IPVAAGSVGVARRALDEARKYAKEREAFGEPIANFQAIQFKLVDMLIGIETARMYTYYAAWLADQGLPHAHASAIAKAYA 322 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCBSSSSBGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCeeCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999998777778899999999
Q ss_pred HHHHHHHHHHHHhhcCCCCCCcCCcchhhhhhhhcccccccccccccccccccCCChHHHHhhhhccceeccchHHHHHH
Q psy5138 484 SEMAGHITRQCIDWMGGLGFTKDYPQEKFYRDCKMAGHITRQCIDWMGGLGFTKDYPQEKYYRDCKVGTIYEGTSNIQLS 563 (575)
Q Consensus 484 ~~~~~~~~~~~~~~~G~~~~~~~~p~~R~~RD~~~~~~~~~~~~~~~Gg~g~~~~~~~~~~~rd~~~~~~~~G~~~~~~~ 563 (575)
++.+.++++.++|+ |||.||+.+++++++|||++...+++|++++++.
T Consensus 323 ~~~a~~~~~~a~q~--------------------------------~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~~i~~~ 370 (379)
T 1ukw_A 323 SEIAFEAANQAIQI--------------------------------HGGYGYVREFPVEKLLRDVKLNQIYEGTNEIQRL 370 (379)
T ss_dssp HHHHHHHHHHHHHH--------------------------------HGGGGGSTTSSHHHHHHHHHGGGTTTSCHHHHHH
T ss_pred HHHHHHHHHHHHHh--------------------------------hCCeecCCCChHHHHHHHhcCceecCCHHHHHHH
Confidence 99999999999999 9999999999999999999999999999999999
Q ss_pred HHHHHHHh
Q psy5138 564 TIAKYIAK 571 (575)
Q Consensus 564 ~i~~~~~~ 571 (575)
.|++.+++
T Consensus 371 ~ia~~~l~ 378 (379)
T 1ukw_A 371 IIARHILA 378 (379)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHhc
Confidence 99999875
No 5
>1egd_A Medium chain acyl-COA dehydrogenase; flavoprotein, electron transfer; HET: FAD; 2.40A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1 PDB: 1egc_A* 1ege_A* 1t9g_A* 2a1t_A* 1udy_A* 3mdd_A* 3mde_A*
Probab=100.00 E-value=1e-54 Score=449.90 Aligned_cols=327 Identities=36% Similarity=0.609 Sum_probs=311.5
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhhHHHhchhcCCccHHHHHHHHHhCC--------------------------------
Q psy5138 215 FIKQASMAKYFASVAKLAKETIAPYVQKMESEEKIDETVLKTLFESGL-------------------------------- 262 (575)
Q Consensus 215 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~G~-------------------------------- 262 (575)
+++++.+++ ..+++|+.+.+.+...+.|+.+.+|+++|++|.+.||
T Consensus 16 ~~~~~~~l~--~~~r~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eel~~~~~~ 93 (396)
T 1egd_A 16 FTEQQKEFQ--ATARKFAREEIIPVAAEYDKTGEYPVPLIRRAWELGLMNTHIPENCGGLGLGTFDACLISEELAYGCTG 93 (396)
T ss_dssp CCHHHHHHH--HHHHHHHHHHTHHHHHHHHHHCCCCHHHHHHHHHHTCSSTTSCGGGTSCCCCHHHHHHHHHHHHHHCHH
T ss_pred CCHHHHHHH--HHHHHHHHHhCchhHHHHHhhCCCCHHHHHHHHHCCCCCCCCchhhCCCCCCHHHHHHHHHHHHhhCcc
Confidence 577888888 9999999999999888999999999999999999997
Q ss_pred ------------------CCHHHHHhcccc-cCCCceeEEeecCCCCCCccccceeEEEEeCCEEEEeeeeccccCCccc
Q psy5138 263 ------------------GTTEQKEKYLPR-LAQTDAGSFALSEPGSGSDAFAMKTTATKDGNHYILNGSKMWISNADIA 323 (575)
Q Consensus 263 ------------------g~~~~~~~~l~~-~~~~~~~~~~~te~~~gs~~~~~~~~a~~~~~g~~l~G~k~~~s~~~~a 323 (575)
|+++|+++||++ ++|+.++++++|||++|||...+.|+|++++|||+|||+|.|+||+.+|
T Consensus 94 ~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~A 173 (396)
T 1egd_A 94 VQTAIEGNSLGQMPIIIAGNDQQKKKYLGRMTEEPLMCAYCVTEPGAGSDVAGIKTKAEKKGDEYIINGQKMWITNGGKA 173 (396)
T ss_dssp HHHHHHHHHHHTHHHHHHCCHHHHHHHHHHHHHSCCCEEEECCBTTBSSSGGGCCCEEEECSSEEEEEEEEEEEETTTTC
T ss_pred HHHHHHhhhHHHHHHHHhCCHHHHHHHHHHHhCCCceEEEEecCCCCCcchhhCeeEEEEeCCEEEEEEEEEcccCCccc
Confidence 899999999999 8999999999999999999999999999999999999999999999999
Q ss_pred cEEEEEEEeCCCCCC---CceEEEEEeCCCCCeeecccCccCCCCCccceeEEEcceeeCCCCcccCCCchHHHHHHHHh
Q psy5138 324 NIFLVMANVDVSKGY---RGITCFIVERSMEGFSVGKKENKLGMKASGTCSLHFDNVRVPEENIISGVGEGYKIAAGFLN 400 (575)
Q Consensus 324 ~~~~v~a~~~~~~~~---~~~~~~lv~~~~~gv~i~~~~~~~G~rg~~s~~l~f~~v~Vp~~~~l~~~~~~~~~~~~~~~ 400 (575)
||++|.++++++++. .++++|+||++.|||++.+.|+++|+++++++++.||||+||++++||.++.|+......+.
T Consensus 174 d~~~v~a~~~~~~~~~~~~g~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~~g~~~~~~~l~ 253 (396)
T 1egd_A 174 NWYFLLARSDPDPKAPANKAFTGFIVEADTPGIQIGRKELNMGQRCSDTRGIVFEDVKVPKENVLIGDGAGFKVAMGAFD 253 (396)
T ss_dssp SEEEEEEECCCCTTSCGGGTEEEEEEETTCTTEEECCCCCBSSCTTSCEEEEEEEEEEEEGGGBSSSTTBHHHHHHHHHH
T ss_pred CEEEEEEEeCCCCCCCCCCCeEEEEEeCCCCCeeeCCccccccccCCCeeEEEECcEEECHHHcCCCCCccHHHHHHHHH
Confidence 999999998754333 57899999999999999999999999999999999999999999999999999998888899
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhhccccCccCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHH
Q psy5138 401 QGRIGIAAQMTGLAQGCLDATIPYTLERSQFGHRIFDFQSVQHQISQAATQVECARLLTYNAARLLEAGQPFIKQASMAK 480 (575)
Q Consensus 401 ~~r~~~~a~~~G~~~~al~~~~~~~~~r~~~g~~l~~~~~~~~~la~~~~~~~aar~~~~~a~~~~~~~~~~~~~~~~ak 480 (575)
..|+.+++.++|+++++++.+++|+++|++||+||+++|.+|++|++|.++++++|++++++++.++.+.+....++++|
T Consensus 254 ~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fG~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~g~~~~~~~~~aK 333 (396)
T 1egd_A 254 KERPVVAAGAVGLAQRALDEATKYALERKTFGKLLVEHQAISFMLAEMAMKVELARMSYQRAAWEVDSGRRNTYYASIAK 333 (396)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999998877777899999
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCCcCCcchhhhhhhhcccccccccccccccccccCCChHHHHhhhhccceeccchHHH
Q psy5138 481 YFASEMAGHITRQCIDWMGGLGFTKDYPQEKFYRDCKMAGHITRQCIDWMGGLGFTKDYPQEKYYRDCKVGTIYEGTSNI 560 (575)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~G~~~~~~~~p~~R~~RD~~~~~~~~~~~~~~~Gg~g~~~~~~~~~~~rd~~~~~~~~G~~~~ 560 (575)
+++++.+.++++.++|+ |||.||+.++++++++||++...+++|++++
T Consensus 334 ~~a~~~a~~~~~~a~q~--------------------------------~Gg~g~~~~~~l~r~~Rda~~~~i~~Gt~~i 381 (396)
T 1egd_A 334 AFAGDIANQLATDAVQI--------------------------------LGGNGFNTEYPVEKLMRDAKIYQIYGGTSQI 381 (396)
T ss_dssp HHHHHHHHHHHHHHHHH--------------------------------HGGGTTBTTSSHHHHHHHHGGGGTTTSCHHH
T ss_pred HHHHHHHHHHHHHHHHH--------------------------------hCcccccCCChHHHHHHHhhCeeecCCHHHH
Confidence 99999999999999999 9999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhcC
Q psy5138 561 QLSTIAKYIAKEYTS 575 (575)
Q Consensus 561 ~~~~i~~~~~~~~~~ 575 (575)
++..|++.++++|..
T Consensus 382 ~~~~ia~~~l~~~~~ 396 (396)
T 1egd_A 382 QRLIVAREHIDKYKN 396 (396)
T ss_dssp HHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHhhcCC
Confidence 999999999999863
No 6
>2d29_A Acyl-COA dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; HET: FAD; 1.65A {Thermus thermophilus} SCOP: a.29.3.1 e.6.1.1 PDB: 1ws9_A 2cx9_A*
Probab=100.00 E-value=1.7e-54 Score=447.12 Aligned_cols=324 Identities=38% Similarity=0.603 Sum_probs=308.6
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhhHHHhchhcCCccHHHHHHHHHhCC--------------------------------
Q psy5138 215 FIKQASMAKYFASVAKLAKETIAPYVQKMESEEKIDETVLKTLFESGL-------------------------------- 262 (575)
Q Consensus 215 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~G~-------------------------------- 262 (575)
+++++.+++ +.+++|+.+.+.+.+.+.|+.+.+|+++|++|.+.||
T Consensus 7 ~~~~~~~l~--~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eel~~~~~~ 84 (387)
T 2d29_A 7 EGAEERQVL--GPFREFLKAEVAPGAAERDRTGAFPWDLVRKLAEFGVFGALVPEAYGGAGLSTRLFARMVEAIAYYDGA 84 (387)
T ss_dssp CCHHHHHHH--HHHHHHHHHHTGGGHHHHHHHCCCCHHHHHHHHTTTGGGSSSCGGGTCCCCCHHHHHHHHHHHHHHCHH
T ss_pred CCHHHHHHH--HHHHHHHHHhcchhHHHHhhcCCCCHHHHHHHHHCCCCCCCCChhhCCCCCCHHHHHHHHHHHHhhChH
Confidence 567788888 8999999999999888899999999999999999997
Q ss_pred -------------------CCHHHHHhcccc-cCCCceeEEeecCCCCCCccccceeEEEEeCCEEEEeeeeccccCCcc
Q psy5138 263 -------------------GTTEQKEKYLPR-LAQTDAGSFALSEPGSGSDAFAMKTTATKDGNHYILNGSKMWISNADI 322 (575)
Q Consensus 263 -------------------g~~~~~~~~l~~-~~~~~~~~~~~te~~~gs~~~~~~~~a~~~~~g~~l~G~k~~~s~~~~ 322 (575)
|+++|+++||++ ++|+.++++++|||++|||...+.|+|++++|||+|||+|.|+||+.+
T Consensus 85 ~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~ 164 (387)
T 2d29_A 85 LALTVASHNSLATGHILLAGSEAQKEAFLPKLASGEALGAWGLTEPGSGSDAAALKTKAEKVEGGWRLNGTKQFITQGSV 164 (387)
T ss_dssp HHHHHHHHHHTHHHHHHHHCCHHHHHHHHHHHHTSSSCEEEECCBTTBSSSGGGCCCEEEEETTEEEEEEEEEEEETTTT
T ss_pred HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhCCCceEEEEeCCCCCCCCHhhCceEEEEeCCEEEEEeEEeccCCCCc
Confidence 899999999999 899999999999999999999999999999999999999999999999
Q ss_pred ccEEEEEEEeCCCC----CCCceEEEEEeCCCCCeeecccCccCCCCCccceeEEEcceeeCCCCcccCCCchHHHHHHH
Q psy5138 323 ANIFLVMANVDVSK----GYRGITCFIVERSMEGFSVGKKENKLGMKASGTCSLHFDNVRVPEENIISGVGEGYKIAAGF 398 (575)
Q Consensus 323 a~~~~v~a~~~~~~----~~~~~~~~lv~~~~~gv~i~~~~~~~G~rg~~s~~l~f~~v~Vp~~~~l~~~~~~~~~~~~~ 398 (575)
|||++|.+++++++ ++.++++|+||++.|||++.+.|+++|+++++++++.||||+||++++||.++.|+......
T Consensus 165 Ad~~~v~a~~~~~~~~~~~~~g~~~flV~~~~pGv~v~~~~~~~g~~~~~~~~v~f~~v~Vp~~~~lg~~~~g~~~~~~~ 244 (387)
T 2d29_A 165 AGVYVVMARTDPPPSPERKHQGISAFAFFRPERGLKVGRKEEKLGLTASDTAQLILEDLFVPEEALLGERGKGFYDVLRV 244 (387)
T ss_dssp CSEEEEEEECSCCSCGGGTTTTEEEEEEECCSSSEEECCCCCCSSCTTSCEEEEEEEEEEEEGGGEESSTTBHHHHHHHH
T ss_pred CCEEEEEEEeCCccccCCCCCCeEEEEEeCCCCCeeccCcccccCCCCCCeeEEEEeeEEECHHHcCCCCCccHHHHHHH
Confidence 99999999987442 45579999999999999999999999999999999999999999999999999999988889
Q ss_pred HhhhHHHHHHHHHHHHHHHHHHHHHHhhhccccCccCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHH
Q psy5138 399 LNQGRIGIAAQMTGLAQGCLDATIPYTLERSQFGHRIFDFQSVQHQISQAATQVECARLLTYNAARLLEAGQPFIKQASM 478 (575)
Q Consensus 399 ~~~~r~~~~a~~~G~~~~al~~~~~~~~~r~~~g~~l~~~~~~~~~la~~~~~~~aar~~~~~a~~~~~~~~~~~~~~~~ 478 (575)
+...|+.+++.++|+++++++.+++|+++|++||+||+++|.+|++|++|.++++++|++++++++.++.+.+....+++
T Consensus 245 l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~g~~~~~~~~~ 324 (387)
T 2d29_A 245 LDGGRIGIAAMAVGLGQAALDYALAYAKGREAFGRPIAEFEGVSFKLAEAATELEAARLLYLKAAELKDAGRPFTLEAAQ 324 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccCCcchHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999988777788999
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCCcCCcchhhhhhhhcccccccccccccccccccCCChHHHHhhhhccceeccchH
Q psy5138 479 AKYFASEMAGHITRQCIDWMGGLGFTKDYPQEKFYRDCKMAGHITRQCIDWMGGLGFTKDYPQEKYYRDCKVGTIYEGTS 558 (575)
Q Consensus 479 ak~~~~~~~~~~~~~~~~~~G~~~~~~~~p~~R~~RD~~~~~~~~~~~~~~~Gg~g~~~~~~~~~~~rd~~~~~~~~G~~ 558 (575)
+|+++++.+.++++.++|+ |||.||+.+++++++|||++...+++|++
T Consensus 325 aK~~a~~~a~~~~~~a~q~--------------------------------~Gg~g~~~~~~~~r~~Rda~~~~i~~G~~ 372 (387)
T 2d29_A 325 AKLFASEAAVKACDEAIQI--------------------------------LGGYGYVKDYPVERYWRDARLTRIGEGTS 372 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHH--------------------------------HGGGGGSTTSSHHHHHHHHGGGGTTTSCH
T ss_pred HHHHHHHHHHHHHHHHHHh--------------------------------cCCeecCCCChHHHHHHHhhCccccCCHH
Confidence 9999999999999999999 99999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhh
Q psy5138 559 NIQLSTIAKYIAKE 572 (575)
Q Consensus 559 ~~~~~~i~~~~~~~ 572 (575)
++++..|++.++++
T Consensus 373 ~i~~~~ia~~~l~~ 386 (387)
T 2d29_A 373 EILKLVIARRLLEA 386 (387)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhhc
Confidence 99999999999874
No 7
>1ivh_A Isovaleryl-COA dehydrogenase; oxidoreductase, acyl-COA dehydrogenase, flavoprotein, isovaleric acidemia; HET: FAD COS; 2.60A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=1.1e-54 Score=449.53 Aligned_cols=326 Identities=35% Similarity=0.602 Sum_probs=309.5
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhhHHHhchhcCCccH--HHHHHHHHhCC------------------------------
Q psy5138 215 FIKQASMAKYFASVAKLAKETIAPYVQKMESEEKIDE--TVLKTLFESGL------------------------------ 262 (575)
Q Consensus 215 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~--~~~~~l~~~G~------------------------------ 262 (575)
+++++.+++ +.+++|+.+.+.+.+.+.|+.+.+|. ++|++|.+.||
T Consensus 13 ~~~e~~~l~--~~~r~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~eel~~~~ 90 (394)
T 1ivh_A 13 LSEEQRQLR--QTMAKFLQEHLAPKAQEIDRSNEFKNLREFWKQLGNLGVLGITAPVQYGGSGLGYLEHVLVMEEISRAS 90 (394)
T ss_dssp CCHHHHHHH--HHHHHHHHHHTTTTHHHHHHHTCCTTHHHHHHHHHHHTCTTTTSCGGGTCCCCCHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHH--HHHHHHHHHhCChhHHHHHhcCCCCchHHHHHHHHHCCCCCCCCCcccCCCCCCHHHHHHHHHHHHhhc
Confidence 577888888 99999999999998888999999999 99999999997
Q ss_pred ---------------------CCHHHHHhcccc-cCCCceeEEeecCCCCCCccccceeEEEEeCCEEEEeeeeccccCC
Q psy5138 263 ---------------------GTTEQKEKYLPR-LAQTDAGSFALSEPGSGSDAFAMKTTATKDGNHYILNGSKMWISNA 320 (575)
Q Consensus 263 ---------------------g~~~~~~~~l~~-~~~~~~~~~~~te~~~gs~~~~~~~~a~~~~~g~~l~G~k~~~s~~ 320 (575)
|+++|+++||++ ++|+.++++++|||++|||...+.|+|++++|||+|||+|.|+||+
T Consensus 91 ~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~l~~G~~~~~~a~tEp~~gsd~~~~~t~A~~~~~g~~lnG~K~~vs~~ 170 (394)
T 1ivh_A 91 GAVGLSYGAHSNLCINQLVRNGNEAQKEKYLPKLISGEYIGALAMSEPNAGSDVVSMKLKAEKKGNHYILNGNKFWITNG 170 (394)
T ss_dssp HHHHHHHHHHHTTTHHHHHHHCCHHHHHHHHHHHHHTSSCEEEECCBTTBSSSGGGCCCEEEECSSEEEEEEEEEEEETG
T ss_pred hhHHHHHHHhhHHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEecCCCCCcCcccceEEEEEcCCEEEEEeEEEeeCCC
Confidence 899999999999 8999999999999999999999999999999999999999999999
Q ss_pred ccccEEEEEEEeCCC--CCCCceEEEEEeCCCCCeeecccCccCCCCCccceeEEEcceeeCCCCcccCCCchHHHHHHH
Q psy5138 321 DIANIFLVMANVDVS--KGYRGITCFIVERSMEGFSVGKKENKLGMKASGTCSLHFDNVRVPEENIISGVGEGYKIAAGF 398 (575)
Q Consensus 321 ~~a~~~~v~a~~~~~--~~~~~~~~~lv~~~~~gv~i~~~~~~~G~rg~~s~~l~f~~v~Vp~~~~l~~~~~~~~~~~~~ 398 (575)
.+|||++|.++++++ +++.++++|+||++.|||++.+.|+++|+++++++++.||||+||++++||.++.|+......
T Consensus 171 ~~Ad~~~v~ar~~~~~~~~~~g~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~~g~~~~~~~ 250 (394)
T 1ivh_A 171 PDADVLIVYAKTDLAAVPASRGITAFIVEKGMPGFSTSKKLDKLGMRGSNTCELIFEDCKIPAANILGHENKGVYVLMSG 250 (394)
T ss_dssp GGCSEEEEEEESCTTCSSGGGGEEEEEEETTCTTEEECCCCCBSSCTTSCEEEEEEEEEEEEGGGEESCTTCHHHHHHHH
T ss_pred CcCCEEEEEEEeCCcccCCCCCeEEEEEeCCCCCeEeccccccccCCCCCeeEEEECcEEEcHHHcCCCCCchHHHHHHH
Confidence 999999999998754 344578999999999999999999999999999999999999999999999999999988888
Q ss_pred HhhhHHHHHHHHHHHHHHHHHHHHHHhhhccccCccCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHH
Q psy5138 399 LNQGRIGIAAQMTGLAQGCLDATIPYTLERSQFGHRIFDFQSVQHQISQAATQVECARLLTYNAARLLEAGQPFIKQASM 478 (575)
Q Consensus 399 ~~~~r~~~~a~~~G~~~~al~~~~~~~~~r~~~g~~l~~~~~~~~~la~~~~~~~aar~~~~~a~~~~~~~~~~~~~~~~ 478 (575)
+...|+.+++.++|+++++++.+++|+++|++||+||+++|.+|++|++|.++++++|++++++++.++.+.+....+++
T Consensus 251 l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~g~~~~~~~~~ 330 (394)
T 1ivh_A 251 LDLERLVLAGGPLGLMQAVLDHTIPYLHVREAFGQKIGHFQLMQGKMADMYTRLMACRQYVYNVAKACDEGHCTAKDCAG 330 (394)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHHHHHHTTCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCeeCCcchhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcchHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999988777788999
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCCcCCcchhhhhhhhcccccccccccccccccccCCChHHHHhhhhccceeccchH
Q psy5138 479 AKYFASEMAGHITRQCIDWMGGLGFTKDYPQEKFYRDCKMAGHITRQCIDWMGGLGFTKDYPQEKYYRDCKVGTIYEGTS 558 (575)
Q Consensus 479 ak~~~~~~~~~~~~~~~~~~G~~~~~~~~p~~R~~RD~~~~~~~~~~~~~~~Gg~g~~~~~~~~~~~rd~~~~~~~~G~~ 558 (575)
+|.++++.+.++++.++|+ |||.||+.++++++++||++...+++|++
T Consensus 331 aK~~a~~~a~~~~~~a~q~--------------------------------~Gg~g~~~~~~l~r~~Rda~~~~i~~Gt~ 378 (394)
T 1ivh_A 331 VILYSAECATQVALDGIQC--------------------------------FGGNGYINDFPMGRFLRDAKLYEIGAGTS 378 (394)
T ss_dssp HHHHHHHHHHHHHHHHHHH--------------------------------HGGGGGBTTSTHHHHHHHHHHTTTTTSCH
T ss_pred HHHHHHHHHHHHHHHHHHh--------------------------------cCCccccCCchHHHHHHhcccccccCChH
Confidence 9999999999999999999 99999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhc
Q psy5138 559 NIQLSTIAKYIAKEYT 574 (575)
Q Consensus 559 ~~~~~~i~~~~~~~~~ 574 (575)
++++..|++.++++|.
T Consensus 379 ~i~~~~ia~~ll~~~~ 394 (394)
T 1ivh_A 379 EVRRLVIGRAFNADFH 394 (394)
T ss_dssp HHHHHHHHHHHHTC--
T ss_pred HHHHHHHHHHHHhhcC
Confidence 9999999999999884
No 8
>2dvl_A Acyl-COA dehydrogenase; structural genomics, NPPSFA, national project on protein STR and functional analyses; HET: FAD; 2.50A {Thermus thermophilus}
Probab=100.00 E-value=3.1e-54 Score=442.87 Aligned_cols=318 Identities=36% Similarity=0.633 Sum_probs=304.5
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhhHHHhchhcCCccHHHHHHHHHhCC--------------------------------
Q psy5138 215 FIKQASMAKYFASVAKLAKETIAPYVQKMESEEKIDETVLKTLFESGL-------------------------------- 262 (575)
Q Consensus 215 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~G~-------------------------------- 262 (575)
+++++.+++ ..+++|+.+.+.+.+.+.|+.+.+|+++|++|.+.||
T Consensus 3 ~~~e~~~l~--~~~r~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eel~~~~~~ 80 (372)
T 2dvl_A 3 LTQEQRLVL--DAVRRVAREVLYPLAPEYDRKAEYPWPQLKALAELGLLGMTTPEEWGGVGLDSVTWALALEELAAADPS 80 (372)
T ss_dssp CCHHHHHHH--HHHHHHHHHTHHHHHHHHHHTTCCCHHHHHHHHHTTGGGTTSCGGGTSCCCCHHHHHHHHHHHHHHCHH
T ss_pred CCHHHHHHH--HHHHHHHHHhCchhHHHHHhhCCCCHHHHHHHHhCCCCCCCCChhhCCCCCCHHHHHHHHHHHHhcCcH
Confidence 457777888 8999999999999888899999999999999999997
Q ss_pred -------------------CCHHHHHhcccc-cCCCceeEEeecCCCCCCccccceeEEEEeCCEEEEeeeeccccCCcc
Q psy5138 263 -------------------GTTEQKEKYLPR-LAQTDAGSFALSEPGSGSDAFAMKTTATKDGNHYILNGSKMWISNADI 322 (575)
Q Consensus 263 -------------------g~~~~~~~~l~~-~~~~~~~~~~~te~~~gs~~~~~~~~a~~~~~g~~l~G~k~~~s~~~~ 322 (575)
|+++|+++||++ ++|+.++++++|||.+|||...+.|+|++++|||+|||+|.|+||+.+
T Consensus 81 ~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~ 160 (372)
T 2dvl_A 81 VAVIVSVTSGLPQYMLLRFGSEAQKRRYLVPLARGEWIGAFCLTEPQAGSDAKSLRAEARRVKGGFVLNGVKSWITSAGH 160 (372)
T ss_dssp HHHHHHHHTSHHHHHHHHHCCHHHHHHTHHHHHTTSSCEEEECCCSSCSSCGGGCCCEEEEETTEEEEEEEEEEEETTTT
T ss_pred HHHHHHHhhhHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEecCCCCCCChhhCeeEEEEECCEEEEEeEEEeecCCCc
Confidence 899999999999 899999999999999999999999999999999999999999999999
Q ss_pred ccEEEEEEEeCCCCCCCceEEEEEeCCCCCeeecccCccCCCCCccceeEEEcceeeCCCCcccCCCchHHHHHHHHhhh
Q psy5138 323 ANIFLVMANVDVSKGYRGITCFIVERSMEGFSVGKKENKLGMKASGTCSLHFDNVRVPEENIISGVGEGYKIAAGFLNQG 402 (575)
Q Consensus 323 a~~~~v~a~~~~~~~~~~~~~~lv~~~~~gv~i~~~~~~~G~rg~~s~~l~f~~v~Vp~~~~l~~~~~~~~~~~~~~~~~ 402 (575)
|||++|.+++++ ++++|+||++.|||++.+.|+++|+++++++++.||||+||++++||.++.|+......+...
T Consensus 161 Ad~~~v~a~~~~-----g~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~~g~~~~~~~l~~~ 235 (372)
T 2dvl_A 161 AHLYVVMARTEK-----GISAFLVEKGTPGLSFGRPEEKMGLHAAHTAEVRLEEVFVPEENLLGEEGRGLAYALAGLDSG 235 (372)
T ss_dssp CSEEEEEEEETT-----EEEEEEEETTCTTEEECCCCCCSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHHHHHH
T ss_pred CCEEEEEEEeCC-----CcEEEEEeCCCCCeEecCcccccccCcCCeeEEEECcEEeCHHHcCCCCCchHHHHHHHHHHH
Confidence 999999999853 689999999999999999999999999999999999999999999999999999888899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhccccCccCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHH
Q psy5138 403 RIGIAAQMTGLAQGCLDATIPYTLERSQFGHRIFDFQSVQHQISQAATQVECARLLTYNAARLLEAGQPFIKQASMAKYF 482 (575)
Q Consensus 403 r~~~~a~~~G~~~~al~~~~~~~~~r~~~g~~l~~~~~~~~~la~~~~~~~aar~~~~~a~~~~~~~~~~~~~~~~ak~~ 482 (575)
|+.+++.++|+++++++.+++|+++|++||+||.++|.+|++|++|.++++++|++++++++.++.+.+....++++|.+
T Consensus 236 r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~g~~~~~~~~~aK~~ 315 (372)
T 2dvl_A 236 RVGVAAQAVGIARGAFEIAKAYAEEREQFGKKLKEHQAIAFKIADMHVKIAAARALVLEAARKKDRGERFTLEASAAKLF 315 (372)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCcccCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999887777889999999
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCcCCcchhhhhhhhcccccccccccccccccccCCChHHHHhhhhccceeccchHHHHH
Q psy5138 483 ASEMAGHITRQCIDWMGGLGFTKDYPQEKFYRDCKMAGHITRQCIDWMGGLGFTKDYPQEKYYRDCKVGTIYEGTSNIQL 562 (575)
Q Consensus 483 ~~~~~~~~~~~~~~~~G~~~~~~~~p~~R~~RD~~~~~~~~~~~~~~~Gg~g~~~~~~~~~~~rd~~~~~~~~G~~~~~~ 562 (575)
+++.+.++++.++|+ |||.||+.++++++++||++...+++|++++++
T Consensus 316 a~~~a~~~~~~a~q~--------------------------------~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~~i~~ 363 (372)
T 2dvl_A 316 ASAAAVEVTREAVQV--------------------------------LGGYGYHRDYRVERYYRDAKVTEIYEGTSEIQR 363 (372)
T ss_dssp HHHHHHHHHHHHHHH--------------------------------TGGGGGSGGGSHHHHHHHHHGGGTTTSCHHHHH
T ss_pred HHHHHHHHHHHHHHh--------------------------------hcCeecCCCCcHHHHHHHhhcceecCCHHHHHH
Confidence 999999999999999 999999999999999999999999999999999
Q ss_pred HHHHHHHHh
Q psy5138 563 STIAKYIAK 571 (575)
Q Consensus 563 ~~i~~~~~~ 571 (575)
..|++.+++
T Consensus 364 ~~ia~~~l~ 372 (372)
T 2dvl_A 364 LVIARELYR 372 (372)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHhhC
Confidence 999998874
No 9
>3r7k_A Probable acyl COA dehydrogenase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: FDA; 2.50A {Mycobacterium abscessus}
Probab=100.00 E-value=2.2e-54 Score=448.22 Aligned_cols=320 Identities=28% Similarity=0.475 Sum_probs=308.7
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhhHHHhchhcCCccHHHHHHHHHhCC--------------------------------
Q psy5138 215 FIKQASMAKYFASVAKLAKETIAPYVQKMESEEKIDETVLKTLFESGL-------------------------------- 262 (575)
Q Consensus 215 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~G~-------------------------------- 262 (575)
+++++.+++ +.+++|+.+.+.+.+.+.|+.+.+|+++|++|.+.||
T Consensus 29 ~~~e~~~l~--~~~r~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~eela~~~~~ 106 (403)
T 3r7k_A 29 TTPERRALS--QMARSFVEREIAPKLAEWEHVGEIPRDLHLNAAEVGLLGIGFPEEVGGSGGNAIDSALVTEAILAAGGS 106 (403)
T ss_dssp GCHHHHHHH--HHHHHHHHHHTTTTHHHHHHHTSCCTHHHHHHHHHTCTTBTSCGGGTCCBCCHHHHHHHHHHHHHTTCC
T ss_pred CCHHHHHHH--HHHHHHHHHhCChhHHHHHhcCCCCHHHHHHHHhCCCCcCCCChhhCCCCCCHHHHHHHHHHHHhcCCc
Confidence 578888888 9999999999999999999999999999999999998
Q ss_pred --------------------CCHHHHHhcccc-cCCCceeEEeecCCCCCCccccceeEEEEeCCEEEEeeeeccccCCc
Q psy5138 263 --------------------GTTEQKEKYLPR-LAQTDAGSFALSEPGSGSDAFAMKTTATKDGNHYILNGSKMWISNAD 321 (575)
Q Consensus 263 --------------------g~~~~~~~~l~~-~~~~~~~~~~~te~~~gs~~~~~~~~a~~~~~g~~l~G~k~~~s~~~ 321 (575)
|+++|+++||++ ++|+.++++++|||++|||...+.|+|++++|||+|||+|.|+||+.
T Consensus 107 ~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~vs~a~ 186 (403)
T 3r7k_A 107 TGVCAALFTHGIALPHIAANGSDALIERYVRPTLAGKMIGSLGVTEPGAGSDVANLRTRAVREGDTYVVNGAKTFITSGV 186 (403)
T ss_dssp HHHHHHHCTHHHHSHHHHHHCCHHHHHHHHHHHHTTSCCEEEECCBTTBSSCGGGCCCEEEECSSEEEEEEEEEEEETTT
T ss_pred hHHHHHHHHhhHHHHHHHHhCCHHHHHHHHHHHhCCCeeEEEEecCCCCCCChhhceEEEEEECCEEEEEEEEEcccCCc
Confidence 999999999999 89999999999999999999999999999999999999999999999
Q ss_pred cccEEEEEEEeCCCCCCCceEEEEEeCCCCCeeecccCccCCCCCccceeEEEcceeeCCCCcccCCCchHHHHHHHHhh
Q psy5138 322 IANIFLVMANVDVSKGYRGITCFIVERSMEGFSVGKKENKLGMKASGTCSLHFDNVRVPEENIISGVGEGYKIAAGFLNQ 401 (575)
Q Consensus 322 ~a~~~~v~a~~~~~~~~~~~~~~lv~~~~~gv~i~~~~~~~G~rg~~s~~l~f~~v~Vp~~~~l~~~~~~~~~~~~~~~~ 401 (575)
+|||++|.++++++ +..++++|+||++.|||++.+.|+++|+++++++++.||||+||++++||.++.|+......+..
T Consensus 187 ~Ad~~~v~a~~~~~-~~~g~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~~g~~~~~~~l~~ 265 (403)
T 3r7k_A 187 RADFVTTAVRTGGP-GYGGVSLLVIDKNSPGFEVSRRLDKMGWRCSDTAELSFVDVRVPADNLVGAENSGFLQIMQQFQA 265 (403)
T ss_dssp TCSEEEEEEECSSS-SGGGEEEEEEETTCTTEEEEEECCBSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHTHHH
T ss_pred cCCEEEEEEEcCCC-CCCceEEEEEeCCCCCeEecCcccccCCCCCCceEEEEeeEEECHHHcCCCCCchHHHHHHHHHH
Confidence 99999999998765 55689999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhccccCccCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHH
Q psy5138 402 GRIGIAAQMTGLAQGCLDATIPYTLERSQFGHRIFDFQSVQHQISQAATQVECARLLTYNAARLLEAGQPFIKQASMAKY 481 (575)
Q Consensus 402 ~r~~~~a~~~G~~~~al~~~~~~~~~r~~~g~~l~~~~~~~~~la~~~~~~~aar~~~~~a~~~~~~~~~~~~~~~~ak~ 481 (575)
.|+.+++.++|+++++++.+++|+++|++||+||.++|.+|++|++|.++++++|++++++++.++.+.+....++++|+
T Consensus 266 ~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~~~~~~~~~aK~ 345 (403)
T 3r7k_A 266 ERLGIAVQAYATAGRALDLAKSWARERETFGRPLTGRQIIRHKLAEMARQVDVACTYTRAVMQRWLAGEDVVAEVSMAKN 345 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCccCCCchhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCcHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999998888888999999
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCcCCcchhhhhhhhcccccccccccccccccccCCChHHHHhhhhccceeccchHHHH
Q psy5138 482 FASEMAGHITRQCIDWMGGLGFTKDYPQEKFYRDCKMAGHITRQCIDWMGGLGFTKDYPQEKYYRDCKVGTIYEGTSNIQ 561 (575)
Q Consensus 482 ~~~~~~~~~~~~~~~~~G~~~~~~~~p~~R~~RD~~~~~~~~~~~~~~~Gg~g~~~~~~~~~~~rd~~~~~~~~G~~~~~ 561 (575)
++++.+.++++.++|+ |||.||+.+++++++|||++...+++|+++++
T Consensus 346 ~a~~~a~~v~~~a~q~--------------------------------~Gg~G~~~~~~~~r~~Rda~~~~i~~Gt~ei~ 393 (403)
T 3r7k_A 346 TAVYACDYVVNEAVQI--------------------------------FGGMGYMRESEIERHYRDCRILGIGGGTNEIM 393 (403)
T ss_dssp HHHHHHHHHHHHHHHH--------------------------------HGGGGGBTTSHHHHHHHHHTTTTTTTSCHHHH
T ss_pred HHHHHHHHHHHHHHHh--------------------------------cCCeEecCCchHHHHHHHhCcceeecCHHHHH
Confidence 9999999999999999 99999999999999999999999999999999
Q ss_pred HHHHHHHH
Q psy5138 562 LSTIAKYI 569 (575)
Q Consensus 562 ~~~i~~~~ 569 (575)
+..|++.+
T Consensus 394 ~~~ia~~l 401 (403)
T 3r7k_A 394 NEVIAKRI 401 (403)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99999876
No 10
>3nf4_A Acyl-COA dehydrogenase; seattle structural genomics center for infectious disease, S FAD, FADH, tuberculosis, oxidoredu; HET: FAD; 2.35A {Mycobacterium thermoresistibile}
Probab=100.00 E-value=2e-54 Score=446.88 Aligned_cols=322 Identities=38% Similarity=0.639 Sum_probs=300.6
Q ss_pred CchHHHHHHHHHHHHHHHHHHHhhhHHHhchhcCCccHHHHHHHHHhCC-------------------------------
Q psy5138 214 PFIKQASMAKYFASVAKLAKETIAPYVQKMESEEKIDETVLKTLFESGL------------------------------- 262 (575)
Q Consensus 214 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~G~------------------------------- 262 (575)
.+++++.+++ ..+++|+.+.+.+.+.+.|+.+.+|+++|++|.+.||
T Consensus 15 ~~~~~~~~l~--~~~r~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~G~~~~~~P~~~GG~g~~~~~~~~v~eel~~~~~ 92 (387)
T 3nf4_A 15 LPSQEAAELI--ELTREIADKVLDPIVDRHEKDETYPEGVFEQLGAAGLLSLPQPEEWGGGGQPYEVYLQVLEEIAARWA 92 (387)
T ss_dssp CSSHHHHHHH--HHHHHHHHHHTTTTHHHHHHHTCCCTTHHHHHHTTTTTSTTSCGGGTCCCCCHHHHHHHHHHHHTTCH
T ss_pred cCCHHHHHHH--HHHHHHHHHhCCccHHHHhhhCCCCHHHHHHHHHCCCCCCCCCHhhCCCCCCHHHHHHHHHHHHHhCc
Confidence 3578888888 9999999999999999999999999999999999997
Q ss_pred -------------------CCHHHHHhcccc-cCCCceeEEeecCCCCCCccccceeEEEEeCCEEEEeeeeccccCCcc
Q psy5138 263 -------------------GTTEQKEKYLPR-LAQTDAGSFALSEPGSGSDAFAMKTTATKDGNHYILNGSKMWISNADI 322 (575)
Q Consensus 263 -------------------g~~~~~~~~l~~-~~~~~~~~~~~te~~~gs~~~~~~~~a~~~~~g~~l~G~k~~~s~~~~ 322 (575)
|+++|+++|+++ ++|+.++++++|||++|||...+.|+|++++|||+|||+|.|+||+.+
T Consensus 93 ~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~ 172 (387)
T 3nf4_A 93 SVAVAVSVHSLSSHPLLVFGTEEQKKRWLPGMLSGEQIGAYSLSEPQAGSDAAALRCAATPTDGGYVINGSKSWITHGGK 172 (387)
T ss_dssp HHHHHHHHHHHHTHHHHHHSCHHHHHHHHHHHTTSSCCEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEEETTTT
T ss_pred hHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhCCCeeEEEEEcCCCCCCChhhCEEEEEEeCCEEEEEeEEecccCCcc
Confidence 899999999999 999999999999999999999999999999999999999999999999
Q ss_pred ccEEEEEEEeCCCCCCCceEEEEEeCCCCCeeecccCccCCCCCccceeEEEcceeeCCCCcccCCCchHHHHHHHHhhh
Q psy5138 323 ANIFLVMANVDVSKGYRGITCFIVERSMEGFSVGKKENKLGMKASGTCSLHFDNVRVPEENIISGVGEGYKIAAGFLNQG 402 (575)
Q Consensus 323 a~~~~v~a~~~~~~~~~~~~~~lv~~~~~gv~i~~~~~~~G~rg~~s~~l~f~~v~Vp~~~~l~~~~~~~~~~~~~~~~~ 402 (575)
|||++|.++++ ++..++++|+||++.|||++.+.|+++|+++++++++.||||+||++++||.++.|+......+...
T Consensus 173 Ad~~~v~a~~~--~~~~g~~~flV~~~~pGv~~~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~~g~~~~~~~l~~~ 250 (387)
T 3nf4_A 173 ADFYTLFARTG--EGSRGVSCFLVPADQPGLSFGKPEEKMGLHAVPTTSAFYDNARIDADRRIGEEGQGLQIAFSALDSG 250 (387)
T ss_dssp CSEEEEEEECC----CCCEEEEEEETTCTTEEECCCCCBSSCCSSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHTHHHH
T ss_pred cCEEEEEEEeC--CCCCceEEEEEECCCCCeEecCcccccccCCCCeeEEEEeeEEecHHHcCCCCCchHHHHHHHHHHH
Confidence 99999999986 3446799999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhccccCccCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHH
Q psy5138 403 RIGIAAQMTGLAQGCLDATIPYTLERSQFGHRIFDFQSVQHQISQAATQVECARLLTYNAARLLEAGQPFIKQASMAKYF 482 (575)
Q Consensus 403 r~~~~a~~~G~~~~al~~~~~~~~~r~~~g~~l~~~~~~~~~la~~~~~~~aar~~~~~a~~~~~~~~~~~~~~~~ak~~ 482 (575)
|+.+++.++|+++++++.+++|+++|++||+|+.++|.+|++|++|.++++++|++++++++.++.+.+.....+++|++
T Consensus 251 r~~~aa~~~G~a~~al~~a~~~a~~R~~fg~~i~~~q~v~~~la~~~~~~~aar~~~~~aa~~~~~~~~~~~~~~~aK~~ 330 (387)
T 3nf4_A 251 RLGIAAVATGLAQAALDEAVAYANERTAFGRKIIDHQGLGFLLADMAAAVATARATYLDAARRRDQGRPYSQQASIAKLT 330 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHC------CTTTC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCeeCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCchHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999988888889999999
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCcCCcchhhhhhhhcccccccccccccccccccCCChHHHHhhhhccceeccchHHHHH
Q psy5138 483 ASEMAGHITRQCIDWMGGLGFTKDYPQEKFYRDCKMAGHITRQCIDWMGGLGFTKDYPQEKYYRDCKVGTIYEGTSNIQL 562 (575)
Q Consensus 483 ~~~~~~~~~~~~~~~~G~~~~~~~~p~~R~~RD~~~~~~~~~~~~~~~Gg~g~~~~~~~~~~~rd~~~~~~~~G~~~~~~ 562 (575)
+++.+.++++.++|+ |||.||+.++++++++||++...+++|++++++
T Consensus 331 a~~~a~~~~~~a~q~--------------------------------~Gg~G~~~~~~~~r~~Rda~~~~i~~Gt~ei~~ 378 (387)
T 3nf4_A 331 ATDAAMKVTTDAVQV--------------------------------FGGVGYTRDYRVERYMREAKIMQIFEGTNQIQR 378 (387)
T ss_dssp HHHHHHHHHHHHHHH--------------------------------HGGGGGBTTSSHHHHHHHHHHHTTSSSCHHHHH
T ss_pred HHHHHHHHHHHHHHh--------------------------------hCcHhhcCCCcHHHHHhHhhcCeeecChHHHHH
Confidence 999999999999999 999999999999999999999999999999999
Q ss_pred HHHHHHHHh
Q psy5138 563 STIAKYIAK 571 (575)
Q Consensus 563 ~~i~~~~~~ 571 (575)
..|+|.+++
T Consensus 379 ~~ia~~l~~ 387 (387)
T 3nf4_A 379 LVIARGLTR 387 (387)
T ss_dssp HHHHHTTC-
T ss_pred HHHHHHHhC
Confidence 999998764
No 11
>3p4t_A Putative acyl-COA dehydrogenase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: FAO; 1.70A {Mycobacterium smegmatis} PDB: 3oib_A*
Probab=100.00 E-value=6.6e-54 Score=444.71 Aligned_cols=320 Identities=29% Similarity=0.484 Sum_probs=308.2
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhhHHHhchhcCCccHHHHHHHHHhCC--------------------------------
Q psy5138 215 FIKQASMAKYFASVAKLAKETIAPYVQKMESEEKIDETVLKTLFESGL-------------------------------- 262 (575)
Q Consensus 215 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~G~-------------------------------- 262 (575)
+++++.+++ ..+++|+.+.+.+.+.+.|+.+.+|+++|++|.+.||
T Consensus 26 ~~~e~~~l~--~~~r~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~eel~~~~~~ 103 (403)
T 3p4t_A 26 TTAEREALR--KTVRAFAEREVLPHAHEWERAGEIPRELHRKAAELGLLGAGFPEDAGGSGGDGADPVVICEEMHYAGSP 103 (403)
T ss_dssp SSHHHHHHH--HHHHHHHHHHTTTTHHHHHHHTSCCHHHHHHHHHTTCTTBTSCGGGTCCBCCTHHHHHHHHHHHHTTCC
T ss_pred CCHHHHHHH--HHHHHHHHHhCchhHHHHhhcCCCCHHHHHHHHHCCCCcCCCChhhCCCCCCHHHHHHHHHHHHHhCCc
Confidence 577888888 9999999999999999999999999999999999998
Q ss_pred --------------------CCHHHHHhcccc-cCCCceeEEeecCCCCCCccccceeEEEEeCCEEEEeeeeccccCCc
Q psy5138 263 --------------------GTTEQKEKYLPR-LAQTDAGSFALSEPGSGSDAFAMKTTATKDGNHYILNGSKMWISNAD 321 (575)
Q Consensus 263 --------------------g~~~~~~~~l~~-~~~~~~~~~~~te~~~gs~~~~~~~~a~~~~~g~~l~G~k~~~s~~~ 321 (575)
|+++|+++||++ ++|+.++++++|||++|||...+.|+|++++|||+|||+|.|+||+.
T Consensus 104 ~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~vs~a~ 183 (403)
T 3p4t_A 104 GGVYASLFTCGIAVPHMIASGDQRLIDTYVRPTLRGEKIGALAITEPGGGSDVGHLRTRADLDGDHYVINGAKTYITSGV 183 (403)
T ss_dssp HHHHHHHSTHHHHSHHHHHHTCHHHHHHTHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEEETTT
T ss_pred hhhhHHHhhhhhHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEecCCCCCCCcccceEEEEEeCCEEEEEEEEEEecCCc
Confidence 899999999999 89999999999999999999999999999999999999999999999
Q ss_pred cccEEEEEEEeCCCCCCCceEEEEEeCCCCCeeecccCccCCCCCccceeEEEcceeeCCCCcccCCCchHHHHHHHHhh
Q psy5138 322 IANIFLVMANVDVSKGYRGITCFIVERSMEGFSVGKKENKLGMKASGTCSLHFDNVRVPEENIISGVGEGYKIAAGFLNQ 401 (575)
Q Consensus 322 ~a~~~~v~a~~~~~~~~~~~~~~lv~~~~~gv~i~~~~~~~G~rg~~s~~l~f~~v~Vp~~~~l~~~~~~~~~~~~~~~~ 401 (575)
+|||++|.++++++ +..++++|+||++.|||++.+.|+++|+++++++++.||||+||++++||.++.|+......+..
T Consensus 184 ~Ad~~~v~a~~~~~-~~~g~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fddv~Vp~~~~lg~~~~g~~~~~~~l~~ 262 (403)
T 3p4t_A 184 RADYVVTAARTGGP-GAGGVSLIVVDKGTPGFEVTRKLDKMGWRSSDTAELSYTDVRVPVANLVGSENTGFAQIAAAFVA 262 (403)
T ss_dssp TCSEEEEEEECSSS-SGGGEEEEEEETTCTTEEEEEECCBSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHHHHH
T ss_pred ccCEEEEEEEeCCC-CCCceEEEEEeCCCCCeEecCCCCcccCCCCCeeEEEEcceEecHHHcCCCCCchHHHHHHHHHH
Confidence 99999999998764 55689999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhccccCccCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCc-HHHHHHHH
Q psy5138 402 GRIGIAAQMTGLAQGCLDATIPYTLERSQFGHRIFDFQSVQHQISQAATQVECARLLTYNAARLLEAGQPF-IKQASMAK 480 (575)
Q Consensus 402 ~r~~~~a~~~G~~~~al~~~~~~~~~r~~~g~~l~~~~~~~~~la~~~~~~~aar~~~~~a~~~~~~~~~~-~~~~~~ak 480 (575)
.|+.+++.++|+++++++.+++|+++|++||+||+++|.+|++|++|.++++++|++++++++.++.+.+. ...++++|
T Consensus 263 ~r~~~aa~~~G~a~~al~~a~~~a~~R~~fg~pi~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~~~~~~~~~~aK 342 (403)
T 3p4t_A 263 ERVGLATQAYAGAQRCLDLTVEWCRNRDTFGRPLISRQAVQNTLAGMARRIDVARVYTRHVVERQLAGETNLIAEVCFAK 342 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCccCCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCchhHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999998776 78899999
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCCcCCcchhhhhhhhcccccccccccccccccccCCChHHHHhhhhccceeccchHHH
Q psy5138 481 YFASEMAGHITRQCIDWMGGLGFTKDYPQEKFYRDCKMAGHITRQCIDWMGGLGFTKDYPQEKYYRDCKVGTIYEGTSNI 560 (575)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~G~~~~~~~~p~~R~~RD~~~~~~~~~~~~~~~Gg~g~~~~~~~~~~~rd~~~~~~~~G~~~~ 560 (575)
+++++.+.++++.++|+ |||.||+.+++++++|||++...+++|++++
T Consensus 343 ~~a~~~a~~v~~~a~q~--------------------------------~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~ei 390 (403)
T 3p4t_A 343 NTAVEAGEWVANQAVQL--------------------------------FGGMGYMAESEVERQYRDMRILGIGGGTTEI 390 (403)
T ss_dssp HHHHHHHHHHHHHHHHH--------------------------------HGGGGGBTTSHHHHHHHHHTTTTTTTSCHHH
T ss_pred HHHHHHHHHHHHHHHHh--------------------------------hChhhccCCCcHHHHHHHhhcceeccCHHHH
Confidence 99999999999999999 9999999999999999999999999999999
Q ss_pred HHHHHHHHH
Q psy5138 561 QLSTIAKYI 569 (575)
Q Consensus 561 ~~~~i~~~~ 569 (575)
++..|++.+
T Consensus 391 ~~~~ia~~l 399 (403)
T 3p4t_A 391 LTSLAAKTL 399 (403)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHc
Confidence 999999987
No 12
>4hr3_A Putative acyl-COA dehydrogenase; ssgcid, seattle structural genomics center for infectious DI niaid; HET: FAD; 1.80A {Mycobacterium abscessus}
Probab=100.00 E-value=4.1e-54 Score=448.53 Aligned_cols=327 Identities=25% Similarity=0.420 Sum_probs=306.4
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhhHHHhchhcC------------------CccHHHHHHHHHhCC--------------
Q psy5138 215 FIKQASMAKYFASVAKLAKETIAPYVQKMESEE------------------KIDETVLKTLFESGL-------------- 262 (575)
Q Consensus 215 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~d~~~------------------~~~~~~~~~l~~~G~-------------- 262 (575)
+++++.+++ ..+++|+.+.+.|...+.++.. .+|++++++|.+.||
T Consensus 9 ~~~~~~~l~--~~~r~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~G~~~~~~P~~~GG~g~ 86 (415)
T 4hr3_A 9 PSARAAELI--AAVREFIDAEVMPVERAVLAHHDELLGARAGTTAELWHVPPELDSLKAKARAAGLWNLFLPDPELGGGL 86 (415)
T ss_dssp CCHHHHHHH--HHHHHHHHHTHHHHHHHHHHHHHHHHHTTCSCSGGGGSCCTHHHHHHHHHHHTTCSSTTCCCTTTSCCC
T ss_pred CCHHHHHHH--HHHHHHHHHhCCccHHHHhhhccccccccccccccccCcchhHHHHHHHHHhCCCcCcCCCHHHCCCCC
Confidence 578888888 9999999999888777766543 278999999999997
Q ss_pred --------------------------------------CCHHHHHhcccc-cCCCceeEEeecCCC-CCCccccceeEEE
Q psy5138 263 --------------------------------------GTTEQKEKYLPR-LAQTDAGSFALSEPG-SGSDAFAMKTTAT 302 (575)
Q Consensus 263 --------------------------------------g~~~~~~~~l~~-~~~~~~~~~~~te~~-~gs~~~~~~~~a~ 302 (575)
|+++|+++||++ ++|+.++++++|||+ +|||...+.|+|+
T Consensus 87 ~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~~gsd~~~~~t~A~ 166 (415)
T 4hr3_A 87 SNSEYAPLAEQMGRSLFAPTVFNCNAPDSGNMEVLHRYGSQEQKEVWLEPLLEGDIRSAFCMTEPDVASSDATNMAATAV 166 (415)
T ss_dssp CHHHHHHHHHHHTTCSSHHHHTTCCTTHHHHHHHHHHHCCHHHHHHTHHHHHTTSCEEEEECCCTTSCTTSGGGCCCEEE
T ss_pred CHHHHHHHHHHHhcccchHHHHHHhccccchHHHHHHhCCHHHHHHHHHHHhCCCceeEEEEcCCCCCCCchhhCeeEEE
Confidence 899999999999 899999999999999 9999999999999
Q ss_pred EeCCEEEEeeeeccccCCcc--ccEEEEEEEeCCC-CCCCceEEEEEeCCCCCeeecccCccCCCCCcc--ceeEEEcce
Q psy5138 303 KDGNHYILNGSKMWISNADI--ANIFLVMANVDVS-KGYRGITCFIVERSMEGFSVGKKENKLGMKASG--TCSLHFDNV 377 (575)
Q Consensus 303 ~~~~g~~l~G~k~~~s~~~~--a~~~~v~a~~~~~-~~~~~~~~~lv~~~~~gv~i~~~~~~~G~rg~~--s~~l~f~~v 377 (575)
+++|||+|||+|.|+||+.+ |||++|+++++++ ++..++++|+||++.|||++.+.|+++|+++++ ++++.||||
T Consensus 167 ~~g~g~~lnG~K~~is~a~~~~Ad~~~v~a~~~~~~~~~~g~~~flV~~~~pGv~v~~~~~~~g~r~~~~~~~~v~fddv 246 (415)
T 4hr3_A 167 VEGDEVVINGRKWWSTGVGHPDCKVIIFMGLTDPNAHRYARHSMVLVPMDTPGITVERMLPTMGFYDEPGGHGVVSFDNV 246 (415)
T ss_dssp EETTEEEEEEEEEEEETTTSTTEEEEEEEEECCTTSCTTSSEEEEEEETTSTTEEEEEECCBTTBCCTTTCEEEEEEEEE
T ss_pred EECCEEEEeeEEeeECCCCCCCCCEEEEEEEeCCCCCCCCceEEEEEEcCCCceEecCCCCccccCCCCCCeeEEEEccE
Confidence 99999999999999999976 9999999998754 344689999999999999999999999999987 999999999
Q ss_pred eeCCCCcccCCCchHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhhhccccCccCccchhHHHHHHHHHHHHHHHHH
Q psy5138 378 RVPEENIISGVGEGYKIAAGFLNQGRIGIAAQMTGLAQGCLDATIPYTLERSQFGHRIFDFQSVQHQISQAATQVECARL 457 (575)
Q Consensus 378 ~Vp~~~~l~~~~~~~~~~~~~~~~~r~~~~a~~~G~~~~al~~~~~~~~~r~~~g~~l~~~~~~~~~la~~~~~~~aar~ 457 (575)
+||++++||.++.|+.+....+...|+.+++.++|+++++++.+++|+++|++||+||+++|.+|++|++|.++++++|+
T Consensus 247 ~Vp~~~~lg~~~~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~~a~~R~~fg~~i~~~q~vq~~la~~~~~~~aar~ 326 (415)
T 4hr3_A 247 RLPADAFIAGPGKGFEIAQGRLGPGRVHHAMRLIGLAEVALEHACRRGLDRTAFGKPLVNLGGNRERIADARIAINQTRL 326 (415)
T ss_dssp EEEGGGBSSCTTCHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSTTHHHHHHHHHHHHHHHHH
T ss_pred EECHHHcCCCCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCCCcHHHhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHc--CCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcCCcchhhhhhhhcccccccccccccccccc
Q psy5138 458 LTYNAARLLEA--GQPFIKQASMAKYFASEMAGHITRQCIDWMGGLGFTKDYPQEKFYRDCKMAGHITRQCIDWMGGLGF 535 (575)
Q Consensus 458 ~~~~a~~~~~~--~~~~~~~~~~ak~~~~~~~~~~~~~~~~~~G~~~~~~~~p~~R~~RD~~~~~~~~~~~~~~~Gg~g~ 535 (575)
+++++++.++. +.+....++++|+++++.+.++++.++|+ |||.||
T Consensus 327 ~~~~aa~~~d~~~~~~~~~~~~~aK~~a~e~a~~v~~~a~qi--------------------------------~Gg~g~ 374 (415)
T 4hr3_A 327 LVLHAAWLLDTVGIMGALSAVSEIKVAAPNMAQQVIDMAIQI--------------------------------HGGGGL 374 (415)
T ss_dssp HHHHHHHHHHHTCGGGCHHHHHHHHHHHHHHHHHHHHHHHHH--------------------------------TGGGGG
T ss_pred HHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHHHHHHH--------------------------------hCcccc
Confidence 99999999987 44567789999999999999999999999 999999
Q ss_pred cCCChHHHHhhhhccceeccchHHHHHHHHHHHHHhhhcC
Q psy5138 536 TKDYPQEKYYRDCKVGTIYEGTSNIQLSTIAKYIAKEYTS 575 (575)
Q Consensus 536 ~~~~~~~~~~rd~~~~~~~~G~~~~~~~~i~~~~~~~~~~ 575 (575)
+.+++++++|||++...+++|++++++..|++.++++|+.
T Consensus 375 ~~~~~~~r~~Rda~~~~i~~Gt~ei~~~~ia~~~l~~~~~ 414 (415)
T 4hr3_A 375 SNDFPLAAAWVNARALRLADGPDEVHRGVVARIELAKYAN 414 (415)
T ss_dssp SSSSSHHHHHHHHHHTTTTTSCHHHHHHHHHHHHHHTTC-
T ss_pred CCCchHHHHHHHhhhheeecCcHHHHHHHHHHHHHHHhhc
Confidence 9999999999999999999999999999999999999963
No 13
>1buc_A Butyryl-COA dehydrogenase; acyl-COA dehydrogenase short-chain acyl-COA dehydrogenase, flavoprotein, oxidoreductase; HET: CAA FAD; 2.50A {Megasphaera elsdenii} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=7.3e-54 Score=442.07 Aligned_cols=323 Identities=38% Similarity=0.645 Sum_probs=307.2
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhhHHHhchhcCCccHHHHHHHHHhCC--------------------------------
Q psy5138 215 FIKQASMAKYFASVAKLAKETIAPYVQKMESEEKIDETVLKTLFESGL-------------------------------- 262 (575)
Q Consensus 215 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~G~-------------------------------- 262 (575)
+++++.+++ ..+++|+.+.+.+.+.+.|+.+.+|+++|++|.+.||
T Consensus 5 ~~~~~~~l~--~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~~~~v~eel~~~ 82 (383)
T 1buc_A 5 LTDIQQDFL--KLAHDFGEKKLAPTVTERDHKGIYDKELIDELLSLGITGAYFEEKYGGSGDDGGDVLSYILAVEELAKY 82 (383)
T ss_dssp CCHHHHHHH--HHHHHHHHHTTTTTHHHHHHHTCCCHHHHHHHHTTSGGGTTSCGGGTCGGGGTCCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHH--HHHHHHHHHhCchhHHHHhhcCCCCHHHHHHHHHCCCCCCCCChhhCCCCCCCCCHHHHHHHHHHHHhh
Confidence 467788888 8999999999999888999999999999999999886
Q ss_pred ----------------------CCHHHHHhcccc-cCCCceeEEeecCCCCCCccccceeEEEEe-CCEEEEeeeecccc
Q psy5138 263 ----------------------GTTEQKEKYLPR-LAQTDAGSFALSEPGSGSDAFAMKTTATKD-GNHYILNGSKMWIS 318 (575)
Q Consensus 263 ----------------------g~~~~~~~~l~~-~~~~~~~~~~~te~~~gs~~~~~~~~a~~~-~~g~~l~G~k~~~s 318 (575)
|+++|+++||++ ++|+.++++++|||++|||...+.|+|+++ +|||+|||+|.|+|
T Consensus 83 ~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~~g~~lnG~K~~~s 162 (383)
T 1buc_A 83 DAGVAITLSATVSLCANPIWQFGTEAQKEKFLVPLVEGTKLGAFGLTEPNAGTDASGQQTIATKNDDGTYTLNGSKIFIT 162 (383)
T ss_dssp CHHHHHHHHHHHHHTHHHHHHHCCHHHHHHTHHHHHHTSSCEEEECCBTTBSSCGGGCCCEEEECTTSCEEEEEEEEEEE
T ss_pred ChHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHhCCCeeEEEEeCCCCCCCChhhCEeEEEEcCCCEEEEEEEEeccC
Confidence 899999999999 899999999999999999999999999999 99999999999999
Q ss_pred CCccccEEEEEEEeCCCCCCCceEEEEEeCCCCCeeecccCccCCCCCccceeEEEcceeeCCCCcccCCCchHHHHHHH
Q psy5138 319 NADIANIFLVMANVDVSKGYRGITCFIVERSMEGFSVGKKENKLGMKASGTCSLHFDNVRVPEENIISGVGEGYKIAAGF 398 (575)
Q Consensus 319 ~~~~a~~~~v~a~~~~~~~~~~~~~~lv~~~~~gv~i~~~~~~~G~rg~~s~~l~f~~v~Vp~~~~l~~~~~~~~~~~~~ 398 (575)
|+.+|||++|.+++++++++.++++|+||++.|||++.+.|+++|+++++++++.||||+||++++||.++.++......
T Consensus 163 ~~~~Ad~~~v~a~~~~~~~~~g~~~flV~~~~~Gv~v~~~~~~~g~~~~~~~~v~f~~v~Vp~~~~lg~~g~g~~~~~~~ 242 (383)
T 1buc_A 163 NGGAADIYIVFAMTDKSKGNHGITAFILEDGTPGFTYGKKEDKMGIHTSQTMELVFQDVKVPAENMLGEEGKGFKIAMMT 242 (383)
T ss_dssp TTTTCSEEEEEEESCSSSSTTSEEEEEEETTCTTEEEEEECCCSSCTTSCEEEEEEEEEEECGGGEESCTTBHHHHHHHH
T ss_pred CCCcCCEEEEEEEeCCCCCCCceEEEEEECCCCCeEecCccccccccCCceeEEEEccEEeCHHHcCCCCCchHHHHHHH
Confidence 99999999999998755455689999999999999999999999999999999999999999999999999999988888
Q ss_pred HhhhHHHHHHHHHHHHHHHHHHHHHHhhhccccCccCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHH
Q psy5138 399 LNQGRIGIAAQMTGLAQGCLDATIPYTLERSQFGHRIFDFQSVQHQISQAATQVECARLLTYNAARLLEAGQPFIKQASM 478 (575)
Q Consensus 399 ~~~~r~~~~a~~~G~~~~al~~~~~~~~~r~~~g~~l~~~~~~~~~la~~~~~~~aar~~~~~a~~~~~~~~~~~~~~~~ 478 (575)
+...|+.+++.++|+++++++.+++|+++|++||+||+++|.+|++|++|.++++++|++++++++.++.+.+....+++
T Consensus 243 l~~~r~~~aa~~~G~a~~al~~~~~ya~~R~~fG~~i~~~q~vq~~la~~~~~~~~ar~~~~~aa~~~~~g~~~~~~~~~ 322 (383)
T 1buc_A 243 LDGGRIGVAAQALGIAEAALADAVEYSKQRVQFGKPLCKFQSISFKLADMKMQIEAARNLVYKAACKKQEGKPFTVDAAI 322 (383)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCeeCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999988777888999
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCCcCCcchhhhhhhhcccccccccccccccccccCCChHHHHhhhhccceeccchH
Q psy5138 479 AKYFASEMAGHITRQCIDWMGGLGFTKDYPQEKFYRDCKMAGHITRQCIDWMGGLGFTKDYPQEKYYRDCKVGTIYEGTS 558 (575)
Q Consensus 479 ak~~~~~~~~~~~~~~~~~~G~~~~~~~~p~~R~~RD~~~~~~~~~~~~~~~Gg~g~~~~~~~~~~~rd~~~~~~~~G~~ 558 (575)
+|+++++.+.++++.++|+ |||.||+.++++++++||++...+++|++
T Consensus 323 aK~~a~~~a~~~~~~a~q~--------------------------------~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~ 370 (383)
T 1buc_A 323 AKRVASDVAMRVTTEAVQI--------------------------------FGGYGYSEEYPVARHMRDAKITQIYEGTN 370 (383)
T ss_dssp HHHHHHHHHHHHHHHHHHH--------------------------------HGGGGGSTTSSHHHHHHHHGGGGTTTSCH
T ss_pred HHHHHHHHHHHHHHHHHHh--------------------------------cCCeecCCCChHHHHHHHhhcccccCCHH
Confidence 9999999999999999999 99999999999999999999999999999
Q ss_pred HHHHHHHHHHHHh
Q psy5138 559 NIQLSTIAKYIAK 571 (575)
Q Consensus 559 ~~~~~~i~~~~~~ 571 (575)
++++..|++.+++
T Consensus 371 ~i~~~~ia~~~l~ 383 (383)
T 1buc_A 371 EVQLMVTGGALLR 383 (383)
T ss_dssp HHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhC
Confidence 9999999998864
No 14
>1rx0_A Acyl-COA dehydrogenase family member 8, mitochondrial; flavoprotein, coenzyme A, oxidoreductase; HET: FAD 2MC; 1.77A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=1.3e-53 Score=441.06 Aligned_cols=323 Identities=34% Similarity=0.530 Sum_probs=306.7
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhhHHHhchhcCCccHHHHHHHHHhCC--------------------------------
Q psy5138 215 FIKQASMAKYFASVAKLAKETIAPYVQKMESEEKIDETVLKTLFESGL-------------------------------- 262 (575)
Q Consensus 215 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~G~-------------------------------- 262 (575)
+++++.+++ ..+++|+.+.+.+.+.+.|+.+.+|+++|++|.+.||
T Consensus 19 ~~~e~~~~~--~~~r~~~~~~~~~~~~~~d~~~~~p~~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~eela~~~~~ 96 (393)
T 1rx0_A 19 LNEEQKEFQ--KVAFDFAAREMAPNMAEWDQKELFPVDVMRKAAQLGFGGVYIQTDVGGSGLSRLDTSVIFEALATGCTS 96 (393)
T ss_dssp CCHHHHHHH--HHHHHHHHHHTHHHHHHHHHHTCCCHHHHHHHHHTTCSSTTSCGGGTCCCCCHHHHHHHHHHHHTTCHH
T ss_pred CCHHHHHHH--HHHHHHHHHhCCccHHHHhhcCCCCHHHHHHHHhCCCCcCCCChhhCCCCCCHHHHHHHHHHHHHhCcc
Confidence 578888888 9999999999999988999999999999999999997
Q ss_pred ------------------CCHHHHHhcccc-cCCCceeEEeecCCCCCCccccceeEEEEeCCEEEEeeeeccccCCccc
Q psy5138 263 ------------------GTTEQKEKYLPR-LAQTDAGSFALSEPGSGSDAFAMKTTATKDGNHYILNGSKMWISNADIA 323 (575)
Q Consensus 263 ------------------g~~~~~~~~l~~-~~~~~~~~~~~te~~~gs~~~~~~~~a~~~~~g~~l~G~k~~~s~~~~a 323 (575)
|+++|+++|+++ ++|+.++++++|||+.|||...+.|+|++++|||+|||+|.|+||+.+|
T Consensus 97 ~~~~~~~~~~~~~~l~~~g~~~qk~~~l~~~~~G~~~~~~a~tEp~~gsd~~~~~t~A~~~~~g~~lnG~K~~is~a~~A 176 (393)
T 1rx0_A 97 TTAYISIHNMCAWMIDSFGNEEQRHKFCPPLCTMEKFASYCLTEPGSGSDAASLLTSAKKQGDHYILNGSKAFISGAGES 176 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHTTSSCEEEECCBTTBSSSGGGCCCEEEEETTEEEEEEEEEEEETTTTC
T ss_pred hhHHHHHhHHHHHHHHHHCCHHHHHHHHHHHhCCCceEEEEecCCCCCcCcccceeEEEEcCCEEEEEeEEEeecCCccC
Confidence 899999999999 8999999999999999999999999999999999999999999999999
Q ss_pred cEEEEEEEeCCCCCCCceEEEEEeCCCCCeeecccCccCCCCCccceeEEEcceeeCCCCcccCCCchHHHHHHHHhhhH
Q psy5138 324 NIFLVMANVDVSKGYRGITCFIVERSMEGFSVGKKENKLGMKASGTCSLHFDNVRVPEENIISGVGEGYKIAAGFLNQGR 403 (575)
Q Consensus 324 ~~~~v~a~~~~~~~~~~~~~~lv~~~~~gv~i~~~~~~~G~rg~~s~~l~f~~v~Vp~~~~l~~~~~~~~~~~~~~~~~r 403 (575)
|+++|.+++++ +++.++++|+||++.|||++.+.|+++|+++++++++.||||+||++++||.++.|+......+...|
T Consensus 177 d~~~v~a~~~~-~~~~g~~~flV~~~~pGv~v~~~~~~~g~~~~~~~~v~fd~v~Vp~~~~lg~~g~g~~~~~~~l~~~r 255 (393)
T 1rx0_A 177 DIYVVMCRTGG-PGPKGISCIVVEKGTPGLSFGKKEKKVGWNSQPTRAVIFEDCAVPVANRIGSEGQGFLIAVRGLNGGR 255 (393)
T ss_dssp SEEEEEEESSS-SSGGGEEEEEEETTCTTEEECCCCCBSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHHHHHHH
T ss_pred CEEEEEEEcCC-CCCCceEEEEEeCCCCCeEecCcccccccCCCCceEEEEcCeEeCHHHcCCCCCchHHHHHHHHHHHH
Confidence 99999999864 34567999999999999999999999999999999999999999999999998999988888888999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccccCccCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC-cHHHHHHHHHH
Q psy5138 404 IGIAAQMTGLAQGCLDATIPYTLERSQFGHRIFDFQSVQHQISQAATQVECARLLTYNAARLLEAGQP-FIKQASMAKYF 482 (575)
Q Consensus 404 ~~~~a~~~G~~~~al~~~~~~~~~r~~~g~~l~~~~~~~~~la~~~~~~~aar~~~~~a~~~~~~~~~-~~~~~~~ak~~ 482 (575)
+.+++.++|+++++++.+++|+++|++||+||+++|.+|++|++|.++++++|++++++++.++.+.+ ....++++|++
T Consensus 256 ~~~aa~~~G~a~~al~~a~~ya~~R~~fG~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~~~~~~~~~~aK~~ 335 (393)
T 1rx0_A 256 INIASCSLGAAHASVILTRDHLNVRKQFGEPLASNQYLQFTLADMATRLVAARLMVRNAAVALQEERKDAVALCSMAKLF 335 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCccCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999988654 46788999999
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCcCCcchhhhhhhhcccccccccccccccccccCCChHHHHhhhhccceeccchHHHHH
Q psy5138 483 ASEMAGHITRQCIDWMGGLGFTKDYPQEKFYRDCKMAGHITRQCIDWMGGLGFTKDYPQEKYYRDCKVGTIYEGTSNIQL 562 (575)
Q Consensus 483 ~~~~~~~~~~~~~~~~G~~~~~~~~p~~R~~RD~~~~~~~~~~~~~~~Gg~g~~~~~~~~~~~rd~~~~~~~~G~~~~~~ 562 (575)
+++.+.++++.++|+ |||.||+.++++++++||++...+++|++++++
T Consensus 336 a~~~a~~v~~~a~q~--------------------------------~Gg~g~~~~~~l~r~~Rda~~~~i~~Gt~~i~~ 383 (393)
T 1rx0_A 336 ATDECFAICNQALQM--------------------------------HGGYGYLKDYAVQQYVRDSRVHQILEGSNEVMR 383 (393)
T ss_dssp HHHHHHHHHHHHHHH--------------------------------TGGGGGBTTSTHHHHHHHHHHTTTSSSCHHHHH
T ss_pred HHHHHHHHHHHHHHh--------------------------------cCCeeecCCChHHHHHHhccCceecCChHHHHH
Confidence 999999999999999 999999999999999999999999999999999
Q ss_pred HHHHHHHHhh
Q psy5138 563 STIAKYIAKE 572 (575)
Q Consensus 563 ~~i~~~~~~~ 572 (575)
..|++.++++
T Consensus 384 ~~ia~~~l~~ 393 (393)
T 1rx0_A 384 ILISRSLLQE 393 (393)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHhcC
Confidence 9999998864
No 15
>2pg0_A Acyl-COA dehydrogenase; GK1316, geobacillus kaustophilus HTA structural genomics, PSI, protein structure initiative; HET: FAD; 1.80A {Geobacillus kaustophilus}
Probab=100.00 E-value=1.3e-53 Score=440.19 Aligned_cols=321 Identities=31% Similarity=0.537 Sum_probs=306.0
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhhHHHhchhcCCccHHHHHHHHHhCC--------------------------------
Q psy5138 215 FIKQASMAKYFASVAKLAKETIAPYVQKMESEEKIDETVLKTLFESGL-------------------------------- 262 (575)
Q Consensus 215 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~G~-------------------------------- 262 (575)
+++++.+++ ..+++|+.+.+.+.+.+.|+.+.+|+++|++|.+.||
T Consensus 10 ~~~~~~~l~--~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eela~~~~~ 87 (385)
T 2pg0_A 10 LREEHHMFR--AAFRKFLEKEAYPHYNDWEKRGIIPRSFWAKMGENGFLCPWVDEKYGGLNADFAYSVVINEELEKVGSS 87 (385)
T ss_dssp CCHHHHHHH--HHHHHHHHHHTTTTHHHHHHHTSCCHHHHHHHHHTTCSSTTSCGGGTCCCCCHHHHHHHHHHHHHHCGG
T ss_pred CCHHHHHHH--HHHHHHHHHhCchhHHHHHhcCCCCHHHHHHHHHCCCCCcCCChhhCCCCCCHHHHHHHHHHHHhhCCc
Confidence 577888888 9999999999999888899999999999999999997
Q ss_pred ------------------CCHHHHHhcccc-cCCCceeEEeecCCCCCCccccceeEEEEeCCEEEEeeeeccccCCccc
Q psy5138 263 ------------------GTTEQKEKYLPR-LAQTDAGSFALSEPGSGSDAFAMKTTATKDGNHYILNGSKMWISNADIA 323 (575)
Q Consensus 263 ------------------g~~~~~~~~l~~-~~~~~~~~~~~te~~~gs~~~~~~~~a~~~~~g~~l~G~k~~~s~~~~a 323 (575)
|+++|+++||++ ++|+.++++++|||++|||...+.|+|++++|||+|||+|.|+||+.+|
T Consensus 88 ~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~A 167 (385)
T 2pg0_A 88 LVGIGLHNDIVTPYIASYGTEEQKQKWLPKCVTGELITAIAMTEPGAGSDLANISTTAVKDGDYYIVNGQKTFITNGIHA 167 (385)
T ss_dssp GHHHHHHHHTTHHHHHHHCCHHHHHHHHHHHHHTSSCEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEETTTTTC
T ss_pred hHHHHHHhhHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEeCCCCCCcCHhhCeEEEEEcCCEEEEEeEEecccCCccc
Confidence 899999999999 8999999999999999999999999999999999999999999999999
Q ss_pred cEEEEEEEeCCC--CCCCceEEEEEeCCCCCeeecccCccCCCCCccceeEEEcceeeCCCCcccCCCchHHHHHHHHhh
Q psy5138 324 NIFLVMANVDVS--KGYRGITCFIVERSMEGFSVGKKENKLGMKASGTCSLHFDNVRVPEENIISGVGEGYKIAAGFLNQ 401 (575)
Q Consensus 324 ~~~~v~a~~~~~--~~~~~~~~~lv~~~~~gv~i~~~~~~~G~rg~~s~~l~f~~v~Vp~~~~l~~~~~~~~~~~~~~~~ 401 (575)
||++|.++++++ +++.++++|+||++.|||++.+.|+++|+++++++++.||||+||++++||.++.|+......+..
T Consensus 168 d~~~v~a~~~~~~~~~~~g~~~flV~~~~pGv~v~~~~~~~g~~~~~~~~v~fd~v~Vp~~~~lg~~g~g~~~~~~~l~~ 247 (385)
T 2pg0_A 168 DLIVVACKTDPQAKPPHRGISLLVVERDTPGFTRGRKLEKVGLHAQDTAELFFQDAKVPAYNLLGEEGKGFYYLMEKLQQ 247 (385)
T ss_dssp SEEEEEEESCTTCSSGGGGEEEEEEETTCTTEEECCCCCBSSCTTSCCEEEEEEEEEEEGGGEESCTTCHHHHHHHHHHH
T ss_pred CEEEEEEEeCCccCCCCCceEEEEEeCCCCCeEecCCccccccCCCceEEEEEcceEEcHHHcCCCCCchHHHHHHHHHH
Confidence 999999998644 344578999999999999999999999999999999999999999999999999999988888999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhccccCccCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHH
Q psy5138 402 GRIGIAAQMTGLAQGCLDATIPYTLERSQFGHRIFDFQSVQHQISQAATQVECARLLTYNAARLLEAGQPFIKQASMAKY 481 (575)
Q Consensus 402 ~r~~~~a~~~G~~~~al~~~~~~~~~r~~~g~~l~~~~~~~~~la~~~~~~~aar~~~~~a~~~~~~~~~~~~~~~~ak~ 481 (575)
.|+.+++.++|+++++++.+++|+++|++||+||+++|.+|++|++|.++++++|++++++++.++.+.+....++++|.
T Consensus 248 ~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~~i~~~q~v~~~la~~~~~~~aar~~~~~aa~~~d~g~~~~~~~~~aK~ 327 (385)
T 2pg0_A 248 ERLVVAIAAQTAAEVMFSLTKQYVKQRTAFGKRVSEFQTVQFRLAEMATEIALGRTFVDRVIEEHMAGKQIVTEVSMAKW 327 (385)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCccCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999988777888999999
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCcCCcchhhhhhhhcccccccccccccccccccCCChHHHHhhhhccceeccchHHHH
Q psy5138 482 FASEMAGHITRQCIDWMGGLGFTKDYPQEKFYRDCKMAGHITRQCIDWMGGLGFTKDYPQEKYYRDCKVGTIYEGTSNIQ 561 (575)
Q Consensus 482 ~~~~~~~~~~~~~~~~~G~~~~~~~~p~~R~~RD~~~~~~~~~~~~~~~Gg~g~~~~~~~~~~~rd~~~~~~~~G~~~~~ 561 (575)
++++.+.++++.++|+ |||.||+.+++++++|||++...+++|+++++
T Consensus 328 ~a~e~a~~~~~~a~q~--------------------------------~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~~i~ 375 (385)
T 2pg0_A 328 WITEMAKRVAAEAMQL--------------------------------HGGYGYMEEYEIARRYRDIPVSAIYAGTNEMM 375 (385)
T ss_dssp HHHHHHHHHHHHHHHH--------------------------------TGGGGGBTTSHHHHHHHHGGGGGTTTSCHHHH
T ss_pred HHHHHHHHHHHHHHHH--------------------------------hCccccCCCCcHHHHHhhhcCceeecCHHHHH
Confidence 9999999999999999 99999999999999999999999999999999
Q ss_pred HHHHHHHH
Q psy5138 562 LSTIAKYI 569 (575)
Q Consensus 562 ~~~i~~~~ 569 (575)
+..|++.+
T Consensus 376 ~~~ia~~l 383 (385)
T 2pg0_A 376 KTIIARQL 383 (385)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHh
Confidence 99999864
No 16
>3sf6_A Glutaryl-COA dehydrogenase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; HET: FDA; 1.70A {Mycobacterium smegmatis}
Probab=100.00 E-value=1.7e-53 Score=441.69 Aligned_cols=319 Identities=29% Similarity=0.478 Sum_probs=306.6
Q ss_pred CchHHHHHHHHHHHHHHHHHHHhhhHHHhchhcCCcc-HHHHHHHHHhCC------------------------------
Q psy5138 214 PFIKQASMAKYFASVAKLAKETIAPYVQKMESEEKID-ETVLKTLFESGL------------------------------ 262 (575)
Q Consensus 214 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~d~~~~~~-~~~~~~l~~~G~------------------------------ 262 (575)
.+++++.+++ +.+++|+.+.+.+.+.+.|+.+.+| +++|++|.+.||
T Consensus 29 ~l~~e~~~l~--~~~r~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~Gl~~l~~~e~GG~g~~~~~~~~v~eela~~~~ 106 (403)
T 3sf6_A 29 VLSAEEREIR--DTVRSVVQRRIKPHIASWYEDGELPARELAVELGELGLLGMHLKGYGCAGMSAVAYGLACLELEAGDS 106 (403)
T ss_dssp GSCHHHHHHH--HHHHHHHHHHTTTTHHHHHHHTCCCHHHHHHHHHHTTCSSTTSCSTTCCCCCHHHHHHHHHHHHHHCH
T ss_pred CCCHHHHHHH--HHHHHHHHHhcChhHHHHHhcCCCCHHHHHHHHHHCCCCcccchhhCCCCCCHHHHHHHHHHHHHhcc
Confidence 3578888888 9999999999999999999999999 999999999997
Q ss_pred --------------------CCHHHHHhcccc-cCCCceeEEeecCCCCCCccccceeEEEEeCCEEEEeeeeccccCCc
Q psy5138 263 --------------------GTTEQKEKYLPR-LAQTDAGSFALSEPGSGSDAFAMKTTATKDGNHYILNGSKMWISNAD 321 (575)
Q Consensus 263 --------------------g~~~~~~~~l~~-~~~~~~~~~~~te~~~gs~~~~~~~~a~~~~~g~~l~G~k~~~s~~~ 321 (575)
|+++|+++||++ ++|+.++++++|||++|||..++.|+|++++|||+|||+|.|+||+.
T Consensus 107 ~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~is~a~ 186 (403)
T 3sf6_A 107 GIRSLVSVQGSLAMYAIHAFGSDEQKDQWLPDMASGHRIGCFGLTEPDHGSDPAGMRTRATRSGDDWILTGTKMWITNGS 186 (403)
T ss_dssp HHHHHHHHHHHTHHHHHHHHCCHHHHHHHHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEEETGG
T ss_pred cHHHHHHHhhhhHHHHHHHhCCHHHHHHHHHHHhCCCceEEEEEccCCCCCCchhcEEEEEEECCEEEEEEEEEeecCCc
Confidence 999999999999 89999999999999999999999999999999999999999999999
Q ss_pred cccEEEEEEEeCCCCCCCceEEEEEeCCCCCeeecccCccCCCCCccceeEEEcceeeCCCCcccCCCchHHHHHHHHhh
Q psy5138 322 IANIFLVMANVDVSKGYRGITCFIVERSMEGFSVGKKENKLGMKASGTCSLHFDNVRVPEENIISGVGEGYKIAAGFLNQ 401 (575)
Q Consensus 322 ~a~~~~v~a~~~~~~~~~~~~~~lv~~~~~gv~i~~~~~~~G~rg~~s~~l~f~~v~Vp~~~~l~~~~~~~~~~~~~~~~ 401 (575)
+|||++|+++++ .++++|+||++.|||++.+.|+++|+|+++++++.||||+||++++||. +.|+......+..
T Consensus 187 ~Ad~~~v~ar~~-----~g~~~flV~~~~pGv~v~~~~~~~G~r~~~~~~v~fd~v~Vp~~~~lg~-~~g~~~~~~~l~~ 260 (403)
T 3sf6_A 187 VADVAVVWARTD-----EGIRGFVVPTDTPGFTANTIKSKMSLRASVTSELVLDGVRLPDSARLPG-ATSLGAPLRCLNE 260 (403)
T ss_dssp GCSEEEEEEEET-----TEEEEEEEETTSTTEEEEECCSCSSCTTSCEEEEEEEEEEEEGGGBCTT-CCSTHHHHHHHHH
T ss_pred ccCEEEEEEEeC-----CceEEEEEECCCCCeEecCCCCccCCCCCceeEEEEccEEEcHHHccCC-ChhHHHHHHHHHH
Confidence 999999999986 3589999999999999999999999999999999999999999999998 8899989999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhccccCccCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHH
Q psy5138 402 GRIGIAAQMTGLAQGCLDATIPYTLERSQFGHRIFDFQSVQHQISQAATQVECARLLTYNAARLLEAGQPFIKQASMAKY 481 (575)
Q Consensus 402 ~r~~~~a~~~G~~~~al~~~~~~~~~r~~~g~~l~~~~~~~~~la~~~~~~~aar~~~~~a~~~~~~~~~~~~~~~~ak~ 481 (575)
.|+.+++.++|+++++++.+++|+++|++||+||+++|.+|++|++|.++++++|++++++++.++.+.+....++++|+
T Consensus 261 ~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~pi~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~~~~~~~~~aK~ 340 (403)
T 3sf6_A 261 ARFGIVFGALGAARDCLETALAYACSREQFDRPIGGFQLTQQKLADMTLEYGKGFLLALHLGRQKDAGELAPEQVSLGKL 340 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCcccCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999998888889999999
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCcCCcchhhhhhhhcccccccccccccccccccCCChHHHHhhhhccceeccchHHHH
Q psy5138 482 FASEMAGHITRQCIDWMGGLGFTKDYPQEKFYRDCKMAGHITRQCIDWMGGLGFTKDYPQEKYYRDCKVGTIYEGTSNIQ 561 (575)
Q Consensus 482 ~~~~~~~~~~~~~~~~~G~~~~~~~~p~~R~~RD~~~~~~~~~~~~~~~Gg~g~~~~~~~~~~~rd~~~~~~~~G~~~~~ 561 (575)
++++.+.++++.++|+ |||.||+.+++++++|||++...+++|+++++
T Consensus 341 ~a~~~a~~v~~~a~q~--------------------------------~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~~i~ 388 (403)
T 3sf6_A 341 NNVREAIEIARTARTV--------------------------------LGASGITGEYPVMRHANNLESVLTYEGTSEMH 388 (403)
T ss_dssp HHHHHHHHHHHHHHHH--------------------------------HGGGGGSTTSSHHHHHHHHHHHHHSSSCHHHH
T ss_pred HHHHHHHHHHHHHHHh--------------------------------cCCeEccccCcHHHHHhhcccceeecCHHHHH
Confidence 9999999999999999 99999999999999999999999999999999
Q ss_pred HHHHHHHHHhh
Q psy5138 562 LSTIAKYIAKE 572 (575)
Q Consensus 562 ~~~i~~~~~~~ 572 (575)
+..|+|.+++.
T Consensus 389 ~~~ia~~llgl 399 (403)
T 3sf6_A 389 TLIIGQALTGV 399 (403)
T ss_dssp HHHHHHHHHSC
T ss_pred HHHHHHHHhCc
Confidence 99999999864
No 17
>3swo_A Glutaryl-COA dehydrogenase; ssgcid, glutaryl-COA dehdrogenase, mycobacerium smegmatis, S genomics; HET: FDA; 1.45A {Mycobacterium smegmatis}
Probab=100.00 E-value=2.2e-53 Score=440.39 Aligned_cols=319 Identities=31% Similarity=0.486 Sum_probs=306.6
Q ss_pred CchHHHHHHHHHHHHHHHHHHHhhhHHHhchhcCCccHHHHHHHHHhCC-------------------------------
Q psy5138 214 PFIKQASMAKYFASVAKLAKETIAPYVQKMESEEKIDETVLKTLFESGL------------------------------- 262 (575)
Q Consensus 214 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~G~------------------------------- 262 (575)
.+++++.+++ ..+++|+.+++.+.+.+.|+.+.+|+++|++|.+.||
T Consensus 25 ~l~~e~~~l~--~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~~l~~~e~GG~g~~~~~~~~v~eel~~~~~~ 102 (399)
T 3swo_A 25 LLDQDERDIA--ATVRQFVDTRLKPNVEGWFESATLPSELAKEFGNLGVLGMHLQGYGCAGTNAVSYGLACMELEAGDSG 102 (399)
T ss_dssp GSCHHHHHHH--HHHHHHHHHHTHHHHHHHHHHTCCCTTHHHHHHHHTCTTTTSCSTTCCCCCHHHHHHHHHHHHHHCHH
T ss_pred CCCHHHHHHH--HHHHHHHHHhCChhHHHHHhhCCCCHHHHHHHHHCCCCcCChhhhCCCCCCHHHHHHHHHHHHHhCcc
Confidence 3578888888 9999999999999999999999999999999999997
Q ss_pred -------------------CCHHHHHhcccc-cCCCceeEEeecCCCCCCccccceeEEEEeCCEEEEeeeeccccCCcc
Q psy5138 263 -------------------GTTEQKEKYLPR-LAQTDAGSFALSEPGSGSDAFAMKTTATKDGNHYILNGSKMWISNADI 322 (575)
Q Consensus 263 -------------------g~~~~~~~~l~~-~~~~~~~~~~~te~~~gs~~~~~~~~a~~~~~g~~l~G~k~~~s~~~~ 322 (575)
|+++|+++||++ ++|+.++++++|||++|||..++.|+|++++|||+|||+|.|+||+.+
T Consensus 103 ~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~vs~a~~ 182 (399)
T 3swo_A 103 FRSFVSVQGSLSMFSIYRYGSEEQKNEWLPRLAAGDAIGCFGLTEPDFGSNPAGMRTRARRDGSDWILNGTKMWITNGNL 182 (399)
T ss_dssp HHHHHHHHTTTHHHHHHHHCCHHHHHHHHHHHHHTSSCEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEEETTTT
T ss_pred HHHHHHHHhhhhhhHHHhcCCHHHHHHHHHHHhCCCeeeEEEecCCCCCCCCccceEEEEEeCCEEEEEEEEEeECCCCc
Confidence 899999999999 899999999999999999999999999999999999999999999999
Q ss_pred ccEEEEEEEeCCCCCCCceEEEEEeCCCCCeeecccCccCCCCCccceeEEEcceeeCCCCcccCCCchHHHHHHHHhhh
Q psy5138 323 ANIFLVMANVDVSKGYRGITCFIVERSMEGFSVGKKENKLGMKASGTCSLHFDNVRVPEENIISGVGEGYKIAAGFLNQG 402 (575)
Q Consensus 323 a~~~~v~a~~~~~~~~~~~~~~lv~~~~~gv~i~~~~~~~G~rg~~s~~l~f~~v~Vp~~~~l~~~~~~~~~~~~~~~~~ 402 (575)
|||++|.++++ .++.+|+||++.|||++.+.|+++|+++++++++.||||+||++++||. +.|+......+...
T Consensus 183 Ad~~~v~a~~~-----~g~~~flV~~~~pGv~v~~~~~~~G~r~~~~~~v~fd~v~Vp~~~~lg~-~~g~~~~~~~l~~~ 256 (399)
T 3swo_A 183 ADVATVWAQTD-----DGIRGFLVPTDTPGFTANEIHRKLSLRASVTSELVLDNVRLPASAQLPL-AEGLSAPLSCLNEA 256 (399)
T ss_dssp CSEEEEEEBCT-----TSCEEEEEETTSTTEEEEECCCBSSCCSSCEEEEEEEEEEECGGGBCTT-CCSTHHHHHHHHHH
T ss_pred cCEEEEEEEeC-----CceEEEEEeCCCCCeEeecCcCcccCCCCceeEEEEccEEEcHHHcCCC-ChhHHHHHHHHHHH
Confidence 99999999985 3589999999999999999999999999999999999999999999998 88999899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhccccCccCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHH
Q psy5138 403 RIGIAAQMTGLAQGCLDATIPYTLERSQFGHRIFDFQSVQHQISQAATQVECARLLTYNAARLLEAGQPFIKQASMAKYF 482 (575)
Q Consensus 403 r~~~~a~~~G~~~~al~~~~~~~~~r~~~g~~l~~~~~~~~~la~~~~~~~aar~~~~~a~~~~~~~~~~~~~~~~ak~~ 482 (575)
|+.+++.++|+++++++.+++|+++|++||+||+++|.+|++|++|.++++++|++++++++.++.+.+....++++|++
T Consensus 257 r~~~aa~~~G~a~~al~~a~~~a~~R~~fG~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~~~~~~~~~aK~~ 336 (399)
T 3swo_A 257 RFGIVFGALGAARDSLETTIAYTQSREVFDKPLSNYQLTQEKLANMTVELGKGMLLAIHLGRIKDAEGVRPEQISLGKLN 336 (399)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCeeCCcchhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999988888899999999
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCcCCcchhhhhhhhcccccccccccccccccccCCChHHHHhhhhccceeccchHHHHH
Q psy5138 483 ASEMAGHITRQCIDWMGGLGFTKDYPQEKFYRDCKMAGHITRQCIDWMGGLGFTKDYPQEKYYRDCKVGTIYEGTSNIQL 562 (575)
Q Consensus 483 ~~~~~~~~~~~~~~~~G~~~~~~~~p~~R~~RD~~~~~~~~~~~~~~~Gg~g~~~~~~~~~~~rd~~~~~~~~G~~~~~~ 562 (575)
+++.+.++++.++|+ |||.||+.+++++++|||++...+++|++++++
T Consensus 337 a~~~a~~v~~~a~q~--------------------------------~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~~i~~ 384 (399)
T 3swo_A 337 NVREAIAIARECRTL--------------------------------LGGSGITLEYSPLRHANNLESVLTYEGTSEMHL 384 (399)
T ss_dssp HHHHHHHHHHHHHHH--------------------------------HGGGGGBSSSTHHHHHHHHHHHHHSSSCHHHHH
T ss_pred HHHHHHHHHHHHHHh--------------------------------hCcccccCCCcHHHHHHHhhcceeecCHHHHHH
Confidence 999999999999999 999999999999999999999999999999999
Q ss_pred HHHHHHHHhh
Q psy5138 563 STIAKYIAKE 572 (575)
Q Consensus 563 ~~i~~~~~~~ 572 (575)
..|++.+++.
T Consensus 385 ~~ia~~llg~ 394 (399)
T 3swo_A 385 LSIGKALTGK 394 (399)
T ss_dssp HHHHHHHHSC
T ss_pred HHHHHHHcCc
Confidence 9999999874
No 18
>3ii9_A Glutaryl-COA dehydrogenase; slipchip, microfluidics, screening, optimization, protein crystallization, structural genomics; HET: PGE PG4; 1.74A {Burkholderia pseudomallei 1710B} PDB: 3eon_A* 3eom_A* 3gqt_A* 3gnc_A* 3d6b_A
Probab=100.00 E-value=3.7e-54 Score=445.80 Aligned_cols=322 Identities=31% Similarity=0.469 Sum_probs=301.3
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhhHHHhchhcCCccHHHHHHHHHhCC--------------------------------
Q psy5138 215 FIKQASMAKYFASVAKLAKETIAPYVQKMESEEKIDETVLKTLFESGL-------------------------------- 262 (575)
Q Consensus 215 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~G~-------------------------------- 262 (575)
+++++.+++ +.+++|+.+.+.+.+.+.|+.+.+|+++|++|.+.||
T Consensus 19 ~~~e~~~l~--~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~~l~~P~~~GG~g~~~~~~~~v~eel~~~~~~ 96 (396)
T 3ii9_A 19 LADDERMVR--DAAHAYAQGKLAPRVTEAFRHETTDAAIFREMGEIGLLGPTIPEQYGGPGLDYVSYGLIAREVERVDSG 96 (396)
T ss_dssp SCHHHHHHH--HHHHHHCCCCCHHHHHHHHHHTCCCTHHHHHHHHTTCSSTTSCGGGTSCCCCHHHHHHHHHHHHTTCHH
T ss_pred CCHHHHHHH--HHHHHHHHHhCChhHHHHHhhCCCCHHHHHHHHhCCCCCCCCChhhCCCCCCHHHHHHHHHHHHHhChh
Confidence 577888888 9999999999999999999999999999999999997
Q ss_pred -------------------CCHHHHHhcccc-cCCCceeEEeecCCCCCCccccceeEEEEeCCEEEEeeeeccccCCcc
Q psy5138 263 -------------------GTTEQKEKYLPR-LAQTDAGSFALSEPGSGSDAFAMKTTATKDGNHYILNGSKMWISNADI 322 (575)
Q Consensus 263 -------------------g~~~~~~~~l~~-~~~~~~~~~~~te~~~gs~~~~~~~~a~~~~~g~~l~G~k~~~s~~~~ 322 (575)
|+++|+++||++ ++|+.++++++|||++|||...+.|+|++++|||+|||+|.|+||+.+
T Consensus 97 ~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~vs~a~~ 176 (396)
T 3ii9_A 97 YRSMMSVQSSLVMVPIFEFGSDAQKEKYLPKLATGEWIGCFGLTEPNHGSDPGSMVTRARKVPGGYSLSGSKMWITNSPI 176 (396)
T ss_dssp HHHHHHCCCCCCCHHHHHHSCHHHHHHHHHHHHHTSSCEEEECCCCC------CCCCEEEEETTEEEEEEEEEEEETGGG
T ss_pred HHHHHHhhhhhHHHHHHHhCCHHHHHHHHHHHhCCCeeeEEEecCCCCCCChhhCeeEEEEeCCEEEEEEEEEeECCCcc
Confidence 899999999999 899999999999999999999999999999999999999999999999
Q ss_pred ccEEEEEEEeCCCCCCCceEEEEEeCCCCCeeecccCccCCCCCccceeEEEcceeeCCCCcccCCCchHHHHHHHHhhh
Q psy5138 323 ANIFLVMANVDVSKGYRGITCFIVERSMEGFSVGKKENKLGMKASGTCSLHFDNVRVPEENIISGVGEGYKIAAGFLNQG 402 (575)
Q Consensus 323 a~~~~v~a~~~~~~~~~~~~~~lv~~~~~gv~i~~~~~~~G~rg~~s~~l~f~~v~Vp~~~~l~~~~~~~~~~~~~~~~~ 402 (575)
|||++|.++++ +++..++++|+||++.|||++.+.|+++|+++++++++.||||+||++++|+. +.|+......+...
T Consensus 177 Ad~~~v~a~~~-~~g~~g~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fddv~Vp~~~~l~~-~~g~~~~~~~l~~~ 254 (396)
T 3ii9_A 177 ADVFVVWAKLD-EDGRDEIRGFILEKGCKGLSAPAIHGKVGLRASITGEIVLDEAFVPEENILPH-VKGLRGPFTCLNSA 254 (396)
T ss_dssp CSEEEEEEEEE-ETTEEEEEEEEEETTCTTEECCBCCCCSSCTTSCEEEEEEEEEEEEGGGBCTT-CCSTHHHHHHHHHH
T ss_pred CCEEEEEEEec-CCCCCceEEEEEecCCCCeEeccccccccCCcCCeeEEEEccEEECHHHccCC-ChHHHHHHHHHHHH
Confidence 99999999986 23345689999999999999999999999999999999999999999999976 78888888999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhccccCccCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHH
Q psy5138 403 RIGIAAQMTGLAQGCLDATIPYTLERSQFGHRIFDFQSVQHQISQAATQVECARLLTYNAARLLEAGQPFIKQASMAKYF 482 (575)
Q Consensus 403 r~~~~a~~~G~~~~al~~~~~~~~~r~~~g~~l~~~~~~~~~la~~~~~~~aar~~~~~a~~~~~~~~~~~~~~~~ak~~ 482 (575)
|+.+++.++|+++++++.+++|+++|++||+|++++|.+|++|++|.++++++|++++++++.++.+.+.....+++|.+
T Consensus 255 r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~~~~~~~~~aK~~ 334 (396)
T 3ii9_A 255 RYGIAWGALGAAESCWHIARQYVLDRKQFGRPLAANQLIQKKLADMQTEITLGLQGVLRLGRMKDEGTAAVEITSIMKRN 334 (396)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCeeCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999988888889999999
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCcCCcchhhhhhhhcccccccccccccccccccCCChHHHHhhhhccceeccchHHHHH
Q psy5138 483 ASEMAGHITRQCIDWMGGLGFTKDYPQEKFYRDCKMAGHITRQCIDWMGGLGFTKDYPQEKYYRDCKVGTIYEGTSNIQL 562 (575)
Q Consensus 483 ~~~~~~~~~~~~~~~~G~~~~~~~~p~~R~~RD~~~~~~~~~~~~~~~Gg~g~~~~~~~~~~~rd~~~~~~~~G~~~~~~ 562 (575)
+++.+.++++.++|+ |||.||+.+++++++|||++...+++|++++++
T Consensus 335 a~~~a~~~~~~a~q~--------------------------------~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~~~~~ 382 (396)
T 3ii9_A 335 SCGKALDIARLARDM--------------------------------LGGNGISDEFGVARHLVNLEVVNTYEGTHDIHA 382 (396)
T ss_dssp HHHHHHHHHHHHHHH--------------------------------HCSCSCSGGGHHHHHHHHHHHHHHHHCSSCHHH
T ss_pred HHHHHHHHHHHHHHh--------------------------------hCcccccCCCcHHHHHhhhcCceeecCHHHHHH
Confidence 999999999999999 999999999999999999999999999999999
Q ss_pred HHHHHHHHhh
Q psy5138 563 STIAKYIAKE 572 (575)
Q Consensus 563 ~~i~~~~~~~ 572 (575)
..|+|.+++.
T Consensus 383 ~~ia~~llgl 392 (396)
T 3ii9_A 383 LILGRAQTGI 392 (396)
T ss_dssp HHHHHHHHSC
T ss_pred HHHHHHHhCc
Confidence 9999999863
No 19
>3owa_A Acyl-COA dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-structure, beta-barrel; HET: MSE FAD 1PE; 1.97A {Bacillus anthracis}
Probab=100.00 E-value=3.6e-53 Score=455.57 Aligned_cols=323 Identities=33% Similarity=0.557 Sum_probs=304.1
Q ss_pred CchHHHHHHHHHHHHHHHHHHHhhhHHHhchhcC-CccHHHHHHHHHhCC------------------------------
Q psy5138 214 PFIKQASMAKYFASVAKLAKETIAPYVQKMESEE-KIDETVLKTLFESGL------------------------------ 262 (575)
Q Consensus 214 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~d~~~-~~~~~~~~~l~~~G~------------------------------ 262 (575)
.+++++.+++ ..+++|+.+.+.|...+.|+.+ .+|+++|++|++.||
T Consensus 32 ~lt~eq~~l~--~~vr~f~~~~~~p~~~~~d~~~~~~~~~~~~~l~e~Gl~gl~vPee~GG~G~~~~~~~~v~Eel~~~~ 109 (597)
T 3owa_A 32 DFSSEHKMIA--KTTEDFIVNEVLPELEYLEQHEFDRSVRLLKEAGELGLLGADVPEEYGGIGLDKVSSALIAEKFSRAG 109 (597)
T ss_dssp GCCHHHHHHH--HHHHHHHHHHTGGGHHHHTTTCHHHHHHHHHHHHHTTTTCTTSCGGGTCCCCCHHHHHHHHHHHGGGT
T ss_pred CCCHHHHHHH--HHHHHHHHHhCchhHHHHHhcCCcCCHHHHHHHHHCCCCcCCCChhhCCCCCCHHHHHHHHHHHHccc
Confidence 3678888998 9999999999999888888776 789999999999997
Q ss_pred --------------------CCHHHHHhcccc-cCCCceeEEeecCCCCCCccccceeEEEEe--CCEEEEeeeeccccC
Q psy5138 263 --------------------GTTEQKEKYLPR-LAQTDAGSFALSEPGSGSDAFAMKTTATKD--GNHYILNGSKMWISN 319 (575)
Q Consensus 263 --------------------g~~~~~~~~l~~-~~~~~~~~~~~te~~~gs~~~~~~~~a~~~--~~g~~l~G~k~~~s~ 319 (575)
|+++|+++|||+ ++|+.++++++|||++|||..++.|+|+++ +++|+|||+|.|+||
T Consensus 110 ~~~~~~~~~~~~~~~~l~~~Gt~eQk~~~Lp~la~Ge~~~a~alTEp~aGSD~~~~~T~A~~~~dG~~yvLnG~K~~is~ 189 (597)
T 3owa_A 110 GFAITHGAHVGIGSLPIVLFGNEEQKKKYLPLLATGEKLAAYALTEPGSGSDALGAKTTARLNAEGTHYVLNGEKQWITN 189 (597)
T ss_dssp HHHHHHHHHHTTTTHHHHHHCCHHHHHHHHHHHHHTSSCEEEECCBTTBSSSGGGCCCEEEECTTSSEEEEEEEEEEEET
T ss_pred hHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHhCCCcceeeEecCCCCCCCcccceeEEEEeCCCCEEEEeeEEEEeCC
Confidence 899999999999 999999999999999999999999999985 457999999999999
Q ss_pred CccccEEEEEEEeCCCCCCCceEEEEEeCCCCCeeecccCccCCCCCccceeEEEcceeeCCCCcccCCCchHHHHHHHH
Q psy5138 320 ADIANIFLVMANVDVSKGYRGITCFIVERSMEGFSVGKKENKLGMKASGTCSLHFDNVRVPEENIISGVGEGYKIAAGFL 399 (575)
Q Consensus 320 ~~~a~~~~v~a~~~~~~~~~~~~~~lv~~~~~gv~i~~~~~~~G~rg~~s~~l~f~~v~Vp~~~~l~~~~~~~~~~~~~~ 399 (575)
+.+|||++|++++++ .++++|+||++.|||++.+.|+++|+++++++++.|+||+||++++||..+.|+.+....+
T Consensus 190 a~~Ad~~lV~Art~~----~g~s~flV~~~~pGv~v~~~~~~~Glrgs~t~~v~fddV~VP~~~lLG~~g~G~~~~~~~l 265 (597)
T 3owa_A 190 SAFADVFIVYAKIDG----EHFSAFIVEKDYAGVSTSPEEKKMGIKCSSTRTLILEDALVPKENLLGEIGKGHIIAFNIL 265 (597)
T ss_dssp TTTCSEEEEEEEETT----TEEEEEEEETTSTTEEECCCCCBSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHHH
T ss_pred CccCCEEEEEEEeCC----CceEEEEEeCCCCCeEEecccccccCCCCCceEEEEeceeecHHHhcCcccchHHHHHHhh
Confidence 999999999999863 3789999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhhhccccCccCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC---------
Q psy5138 400 NQGRIGIAAQMTGLAQGCLDATIPYTLERSQFGHRIFDFQSVQHQISQAATQVECARLLTYNAARLLEAGQ--------- 470 (575)
Q Consensus 400 ~~~r~~~~a~~~G~~~~al~~~~~~~~~r~~~g~~l~~~~~~~~~la~~~~~~~aar~~~~~a~~~~~~~~--------- 470 (575)
..+|+.+++.++|+++++++.+++|+++|++||+||+++|.+|++|++|.++++++|++++++++.+|.+.
T Consensus 266 ~~~R~~~aa~~lG~a~~al~~a~~ya~~R~qfG~pi~~~q~vq~~LA~m~~~~~aar~l~~~aa~~~d~~~~~~~~~~~~ 345 (597)
T 3owa_A 266 NIGRYKLGVGTVGSAKRAVEISAQYANQRQQFKQPIARFPLIQEKLANMAAKTYAAESSVYRTVGLFESRMSTLSEEEVK 345 (597)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHhCeeCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999887642
Q ss_pred ----------CcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcCCcchhhhhhhhcccccccccccccccccccCCCh
Q psy5138 471 ----------PFIKQASMAKYFASEMAGHITRQCIDWMGGLGFTKDYPQEKFYRDCKMAGHITRQCIDWMGGLGFTKDYP 540 (575)
Q Consensus 471 ----------~~~~~~~~ak~~~~~~~~~~~~~~~~~~G~~~~~~~~p~~R~~RD~~~~~~~~~~~~~~~Gg~g~~~~~~ 540 (575)
+...+++++|+++++.+.++++.++|+ |||.||+.++|
T Consensus 346 ~~~~~~~~~~~~~~~~s~aK~~ase~a~~v~~~a~qi--------------------------------~GG~G~~~e~~ 393 (597)
T 3owa_A 346 DGKAVAASIAEYAIECSLNKVFGSEVLDYTVDEGVQI--------------------------------HGGYGFMAEYE 393 (597)
T ss_dssp HCHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHH--------------------------------HGGGGGBTTSH
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh--------------------------------hCCccccccCh
Confidence 124568899999999999999999999 99999999999
Q ss_pred HHHHhhhhccceeccchHHHHHHHHHHHHHhhhc
Q psy5138 541 QEKYYRDCKVGTIYEGTSNIQLSTIAKYIAKEYT 574 (575)
Q Consensus 541 ~~~~~rd~~~~~~~~G~~~~~~~~i~~~~~~~~~ 574 (575)
++++|||++...|++|++++++..|++.++++|.
T Consensus 394 ler~~RDar~~~i~eGt~ei~r~~Ia~~ll~~~~ 427 (597)
T 3owa_A 394 IERMYRDSRINRIFEGTNEINRLIVPGTFLRKAM 427 (597)
T ss_dssp HHHHHHHHGGGGTSSSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhhheeCcHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999873
No 20
>2ix5_A Acyl-coenzyme A oxidase 4, peroxisomal; FAD, ACX4, flavin, peroxisome, glyoxysome, fatty acid metabo lipid metabolism, acyl-COA oxidase; HET: CAA FAD; 2.7A {Arabidopsis thaliana} PDB: 2ix6_A*
Probab=100.00 E-value=8.5e-53 Score=438.91 Aligned_cols=320 Identities=28% Similarity=0.424 Sum_probs=302.5
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhhHHHhchhcCCccHHHHHHHHHhCC--------------------------------
Q psy5138 215 FIKQASMAKYFASVAKLAKETIAPYVQKMESEEKIDETVLKTLFESGL-------------------------------- 262 (575)
Q Consensus 215 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~G~-------------------------------- 262 (575)
+++++.+++ ..+++|+.+.+.+...+.++.+.+|+++|++|.+.||
T Consensus 55 l~~e~~~l~--~~~r~f~~~~~~p~~~~~~~~~~~p~~~~~~l~e~Gl~~l~~pe~GG~G~~~~~~~~v~eela~~~~~~ 132 (436)
T 2ix5_A 55 LTPEEQAIR--KKVRECMEKEVAPIMTEYWEKAEFPFHITPKLGAMGVAGGSIKGYGCPGLSITANAIATAEIARVDASC 132 (436)
T ss_dssp SCHHHHHHH--HHHHHHHHHHTHHHHHHHHHHTCCCGGGHHHHHTTTCTTTTCCSTTCCCCCHHHHHHHHHHHHHHCHHH
T ss_pred CCHHHHHHH--HHHHHHHHhhCChhhHHHHhcCCCCHHHHHHHHHcCCCcCcCCCCCCCCCCHHHHHHHHHHHHhhCccH
Confidence 567888888 9999999999988888888888999999999999997
Q ss_pred ------------------CCHHHHHhcccc-cCCCceeEEeecCCCCCCccccceeEEEEeCCEEEEeeeeccccCCccc
Q psy5138 263 ------------------GTTEQKEKYLPR-LAQTDAGSFALSEPGSGSDAFAMKTTATKDGNHYILNGSKMWISNADIA 323 (575)
Q Consensus 263 ------------------g~~~~~~~~l~~-~~~~~~~~~~~te~~~gs~~~~~~~~a~~~~~g~~l~G~k~~~s~~~~a 323 (575)
|+++|+++||++ ++|+.++|+++|||++|||...+.|+|++++|||+|||+|.|+||+.+|
T Consensus 133 ~~~~~~~~~~~~~~l~~~gt~~qk~~~l~~l~~G~~~~a~a~tEp~~GSd~~~~~t~A~~~gdg~vLnG~K~~is~a~~A 212 (436)
T 2ix5_A 133 STFILVHSSLGMLTIALCGSEAQKEKYLPSLAQLNTVACWALTEPDNGSDASGLGTTATKVEGGWKINGQKRWIGNSTFA 212 (436)
T ss_dssp HHHHHHHHTTHHHHHHHHSCHHHHHHHHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEEETTTTC
T ss_pred HHHHHhHHHHHHHHHHHhCCHHHHHHHHHHHhCCCeeeEEEecCCCCCCCcccceEEEEEeCCEEEEeeeccCCCCCccc
Confidence 899999999999 8999999999999999999999999999999999999999999999999
Q ss_pred cEEEEEEEeCCCCCCCceEEEEEeCCCCCeeecccCccCCCCCccceeEEEcceeeCCCCcccCCCchHHHHHHHHhhhH
Q psy5138 324 NIFLVMANVDVSKGYRGITCFIVERSMEGFSVGKKENKLGMKASGTCSLHFDNVRVPEENIISGVGEGYKIAAGFLNQGR 403 (575)
Q Consensus 324 ~~~~v~a~~~~~~~~~~~~~~lv~~~~~gv~i~~~~~~~G~rg~~s~~l~f~~v~Vp~~~~l~~~~~~~~~~~~~~~~~r 403 (575)
||++|.++++++ .++++|+||++.|||++.+.|+++|+++++++++.||||+||++++|+.. .++......+...|
T Consensus 213 d~~lv~Ar~~~~---~~~~~flV~~~~pGv~v~~~~~~~G~r~~~~~~v~fddv~VP~~~~lg~~-~g~~~~~~~l~~~r 288 (436)
T 2ix5_A 213 DLLIIFARNTTT---NQINGFIVKKDAPGLKATKIPNKIGLRMVQNGDILLQNVFVPDEDRLPGV-NSFQDTSKVLAVSR 288 (436)
T ss_dssp SEEEEEEEETTT---SSEEEEEEETTCTTEEEEECCCBSSSTTSCEEEEEEEEEEEEGGGBCTTC-SSHHHHHHHHHHHH
T ss_pred CEEEEEEEECCC---CcEEEEEEECCCCCeEeeccccccCCCcCCceeEEeccEEECHHHcCCcc-ccHHHHHHHHHHHH
Confidence 999999998632 36899999999999999999999999999999999999999999999865 57888888899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccccCccCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Q psy5138 404 IGIAAQMTGLAQGCLDATIPYTLERSQFGHRIFDFQSVQHQISQAATQVECARLLTYNAARLLEAGQPFIKQASMAKYFA 483 (575)
Q Consensus 404 ~~~~a~~~G~~~~al~~~~~~~~~r~~~g~~l~~~~~~~~~la~~~~~~~aar~~~~~a~~~~~~~~~~~~~~~~ak~~~ 483 (575)
+.+++.++|+++++++.+++|+++|++||+||+++|.+|++|++|.++++++|++++++++.++.+.+....++++|+++
T Consensus 289 ~~~aa~~~G~a~~al~~a~~ya~~R~qfG~pi~~~q~vq~~la~~~~~~~aar~l~~~aa~~~d~g~~~~~~as~aK~~a 368 (436)
T 2ix5_A 289 VMVAWQPIGISMGIYDMCHRYLKERKQFGAPLAAFQLNQQKLVQMLGNVQAMFLMGWRLCKLYETGQMTPGQASLGKAWI 368 (436)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCeeCCcchhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCchHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999998877777899999999
Q ss_pred HHHHHHHHHHHHhhcCCCCCCcCCcchhhhhhhhcccccccccccccccccccCCChHHHHhhhhccceeccchHHHHHH
Q psy5138 484 SEMAGHITRQCIDWMGGLGFTKDYPQEKFYRDCKMAGHITRQCIDWMGGLGFTKDYPQEKYYRDCKVGTIYEGTSNIQLS 563 (575)
Q Consensus 484 ~~~~~~~~~~~~~~~G~~~~~~~~p~~R~~RD~~~~~~~~~~~~~~~Gg~g~~~~~~~~~~~rd~~~~~~~~G~~~~~~~ 563 (575)
++.+.++++.++|+ |||.||+.+++++++|||++...+++|++++++.
T Consensus 369 ~e~a~~v~~~a~q~--------------------------------~Gg~G~~~e~~l~r~~Rda~~~~i~~Gt~ei~~~ 416 (436)
T 2ix5_A 369 SSKARETASLGREL--------------------------------LGGNGILADFLVAKAFCDLEPIYTYEGTYDINTL 416 (436)
T ss_dssp HHHHHHHHHHHHHH--------------------------------TGGGGGBGGGSHHHHHHHHHHHHHSSSCHHHHHH
T ss_pred HHHHHHHHHHHHHH--------------------------------hCccccccCChHHHHHHHhhcceeecCHHHHHHH
Confidence 99999999999999 9999999999999999999999999999999999
Q ss_pred HHHHHHHhh
Q psy5138 564 TIAKYIAKE 572 (575)
Q Consensus 564 ~i~~~~~~~ 572 (575)
.|+|.+++.
T Consensus 417 ~iar~llgl 425 (436)
T 2ix5_A 417 VTGREVTGI 425 (436)
T ss_dssp HHHHHHHSC
T ss_pred HHHHHHhCC
Confidence 999998753
No 21
>2eba_A Putative glutaryl-COA dehydrogenase; thermus thermophilius, FAD, STRU genomics, NPPSFA; HET: FAD; 2.21A {Thermus thermophilus}
Probab=100.00 E-value=1.2e-52 Score=433.06 Aligned_cols=318 Identities=27% Similarity=0.435 Sum_probs=299.5
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhhHHHhchhcCCccHHHHHHHHHhCC--------------------------------
Q psy5138 215 FIKQASMAKYFASVAKLAKETIAPYVQKMESEEKIDETVLKTLFESGL-------------------------------- 262 (575)
Q Consensus 215 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~G~-------------------------------- 262 (575)
+++++.+++ +.+++|+.+.+.+...+.|+.+.+|+++|++|.+.||
T Consensus 11 ~~~~~~~l~--~~~r~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eela~~~~~ 88 (385)
T 2eba_A 11 LTPEEKEVQ--KAARRFLEKEALPHIRDWWEEGVFPTHLIPRFAELGFLGPTLPPEYGGAGVSSAAYGLICYELERVDSG 88 (385)
T ss_dssp SCHHHHHHH--HHHHHHHHHHTHHHHHHHHHTTCCCGGGHHHHHHHTCSSTTSCGGGTCCCCCHHHHHHHHHHHHHHCHH
T ss_pred CCHHHHHHH--HHHHHHHHHhCCccHHHHHHhCCCCHHHHHHHHHCCCcCCCCchhhCCCCCCHHHHHHHHHHHHHhCch
Confidence 567788888 9999999999999998999999999999999999997
Q ss_pred -------------------CCHHHHHhcccc-cCCCceeEEeecCCCCCCcc-ccceeEEEEeCCEEEEeeeeccccCCc
Q psy5138 263 -------------------GTTEQKEKYLPR-LAQTDAGSFALSEPGSGSDA-FAMKTTATKDGNHYILNGSKMWISNAD 321 (575)
Q Consensus 263 -------------------g~~~~~~~~l~~-~~~~~~~~~~~te~~~gs~~-~~~~~~a~~~~~g~~l~G~k~~~s~~~ 321 (575)
|+++|+++||++ ++|+.++++++|||++|||. ..+.|+|++++|||+|||+|.|+||+.
T Consensus 89 ~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~~t~A~~~~~g~~lnG~K~~~s~~~ 168 (385)
T 2eba_A 89 LRSFVSVQSSLVMYPIYAYGSEEQKREFLPKLARGEMVGCFGLTEPDGGSDPYGNMKTRARREGDTWVLNGTKMWITNGN 168 (385)
T ss_dssp HHHHHHHHHHTTHHHHHHHSCHHHHHHHHHHHHTTSSCEEEECCCTTCTTSTTTTCCCEEEC--CEEEEEEEEEEEETTT
T ss_pred HHHHHHHHHhHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEeCCCCcCCCccccCeeEEEEeCCEEEEEeeeeccCCCc
Confidence 899999999999 89999999999999999999 899999999999999999999999999
Q ss_pred cccEEEEEEEeCCCCCCCceEEEEEeCCCCCeeecccCccCCCCCccceeEEEcceeeCCCCcccCCCchHHHHHHHHhh
Q psy5138 322 IANIFLVMANVDVSKGYRGITCFIVERSMEGFSVGKKENKLGMKASGTCSLHFDNVRVPEENIISGVGEGYKIAAGFLNQ 401 (575)
Q Consensus 322 ~a~~~~v~a~~~~~~~~~~~~~~lv~~~~~gv~i~~~~~~~G~rg~~s~~l~f~~v~Vp~~~~l~~~~~~~~~~~~~~~~ 401 (575)
+|||++|.++++ + + + +++|+||++.|||++.+.|+++|+++++++++.||||+||++++| ..++|+......+..
T Consensus 169 ~Ad~~~v~a~~~-~-g-~-~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~f~~v~Vp~~~~l-~~~~g~~~~~~~l~~ 243 (385)
T 2eba_A 169 LAHLAVIWAKDE-G-G-E-VLGFLVPTDTPGFQAREVKRKMSLRASVTSELVLEEVRVPESLRL-PKALGLKAPLSCLTQ 243 (385)
T ss_dssp TCSEEEEEEECC-------EEEEEEETTSTTEEEEECCSBSSSCSSCEEEEEEEEEEEEGGGBC-TTCCSTHHHHHHHHH
T ss_pred ccCEEEEEEEeC-C-C-c-EEEEEEeCCCCCeEecccccccccccCceeEEEEccEEEcHHHcc-CCCchHHHHHHHHHH
Confidence 999999999985 2 2 3 889999999999999999999999999999999999999999999 678888888888889
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhccccCccCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHH
Q psy5138 402 GRIGIAAQMTGLAQGCLDATIPYTLERSQFGHRIFDFQSVQHQISQAATQVECARLLTYNAARLLEAGQPFIKQASMAKY 481 (575)
Q Consensus 402 ~r~~~~a~~~G~~~~al~~~~~~~~~r~~~g~~l~~~~~~~~~la~~~~~~~aar~~~~~a~~~~~~~~~~~~~~~~ak~ 481 (575)
.|+.+++.++|+++++++.+++|+++|++||+||+++|.+|++|++|.++++++|++++++++.++.+.+.....+++|.
T Consensus 244 ~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~g~~~~~~~~~aK~ 323 (385)
T 2eba_A 244 ARFGIAWGAMGALEAVYEEAVAFAKSRSTFGEPLAKKQLVQAKLAEMLAWHTEGLLLAWRLARLKDEGKLTPAQVSLAKR 323 (385)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCBSSSSBGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCeeCCeeHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999988777778999999
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCcCCcchhhhhhhhcccccccccccccccccccCCChHHHHhhhhccceeccchHHHH
Q psy5138 482 FASEMAGHITRQCIDWMGGLGFTKDYPQEKFYRDCKMAGHITRQCIDWMGGLGFTKDYPQEKYYRDCKVGTIYEGTSNIQ 561 (575)
Q Consensus 482 ~~~~~~~~~~~~~~~~~G~~~~~~~~p~~R~~RD~~~~~~~~~~~~~~~Gg~g~~~~~~~~~~~rd~~~~~~~~G~~~~~ 561 (575)
++++.+.++++.++|+ |||.||+.++++++++||++...+++|+++++
T Consensus 324 ~a~~~a~~v~~~a~q~--------------------------------~Gg~g~~~~~~l~r~~Rda~~~~~~~G~~~~~ 371 (385)
T 2eba_A 324 QNVWKALQAARMARDI--------------------------------LGGSGITLEYHAIRHMLNLETVYTYEGTHDVH 371 (385)
T ss_dssp HHHHHHHHHHHHHHHH--------------------------------HGGGGGBTTSSHHHHHHHHHHHTTSSSCHHHH
T ss_pred HHHHHHHHHHHHHHHH--------------------------------hCCcccCCcChHHHHHHhccCceeeCChHHHH
Confidence 9999999999999999 99999999999999999999999999999999
Q ss_pred HHHHHHHHHh
Q psy5138 562 LSTIAKYIAK 571 (575)
Q Consensus 562 ~~~i~~~~~~ 571 (575)
+..|++.+++
T Consensus 372 ~~~ia~~llg 381 (385)
T 2eba_A 372 TLVLGREITG 381 (385)
T ss_dssp HHHHHHHHHS
T ss_pred HHHHHHHHhC
Confidence 9999999875
No 22
>3mpi_A Glutaryl-COA dehydrogenase; alpha-beta fold, oxidoreductase; HET: FAD GRA; 2.05A {Desulfococcus multivorans} PDB: 3mpj_A*
Probab=100.00 E-value=8.4e-53 Score=436.25 Aligned_cols=321 Identities=38% Similarity=0.626 Sum_probs=306.8
Q ss_pred CchHHHHHHHHHHHHHHHHHHHhhhHHHhchhcCCcc-HHHHHHHHHhCC------------------------------
Q psy5138 214 PFIKQASMAKYFASVAKLAKETIAPYVQKMESEEKID-ETVLKTLFESGL------------------------------ 262 (575)
Q Consensus 214 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~d~~~~~~-~~~~~~l~~~G~------------------------------ 262 (575)
.+++++.+++ ..+++|+.+.+.+.+.+.|+.+.+| +++|++|.+.||
T Consensus 4 ~~~~~~~~l~--~~~r~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~~Gl~~l~~P~~~GG~g~~~~~~~~~~v~eela~ 81 (397)
T 3mpi_A 4 NLSKELQMLQ--KEVRNFVNKKIVPFADQWDNENHFPYEEAVRPMGELGFFGTVIPEEYGGEGMDQGWLAAMIVTEEIAR 81 (397)
T ss_dssp CCCHHHHHHH--HHHHHHHHHHTTTTHHHHHHHTCCCTTTTHHHHHHTTTTCTTSCGGGTSCCCTTHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHH--HHHHHHHHHhCChhHHHHHhcCCCCHHHHHHHHHHCCCCccCCChhhCCCCCCCCHHHHHHHHHHHHh
Confidence 3578888888 9999999999999999999999999 999999999997
Q ss_pred -----------------------CCHHHHHhcccc-cCCCceeEEeecCCCCCCccccceeEEEEeCCEEEEeeeecccc
Q psy5138 263 -----------------------GTTEQKEKYLPR-LAQTDAGSFALSEPGSGSDAFAMKTTATKDGNHYILNGSKMWIS 318 (575)
Q Consensus 263 -----------------------g~~~~~~~~l~~-~~~~~~~~~~~te~~~gs~~~~~~~~a~~~~~g~~l~G~k~~~s 318 (575)
|+++|+++||++ +.|+.++++++|||..|||...+.|+|++++|||+|||+|.|+|
T Consensus 82 ~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~gsd~~~~~t~A~~~~~g~~lnG~K~~~s 161 (397)
T 3mpi_A 82 GSSALRVQLNMEVLGCAYTILTYGSEALKKKYVPKLSSAEFLGGFGITEPDAGSDVMAMSSTAEDKGDHWLLNGSKTWIS 161 (397)
T ss_dssp HCHHHHHHHHHHTTTTHHHHHHHSCHHHHHHHHHHHHTTSSCCCEECCBTTBSSCGGGCCCEEEECSSEEEEEEEEEEEE
T ss_pred hCchHHHHHHHHHHhHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEecCCCCCCCcccCeEEEEEeCCEEEEEEEEEeeC
Confidence 789999999999 89999999999999999999999999999999999999999999
Q ss_pred CCccccEEEEEEEeCCCCCCCceEEEEE-eCCCCCeeecccCccCCCCCccceeEEEcceeeCCCCcccCCCchHHHHHH
Q psy5138 319 NADIANIFLVMANVDVSKGYRGITCFIV-ERSMEGFSVGKKENKLGMKASGTCSLHFDNVRVPEENIISGVGEGYKIAAG 397 (575)
Q Consensus 319 ~~~~a~~~~v~a~~~~~~~~~~~~~~lv-~~~~~gv~i~~~~~~~G~rg~~s~~l~f~~v~Vp~~~~l~~~~~~~~~~~~ 397 (575)
|+.+|||++|.++++++++..++.+|+| |++.|||++ +.|+++|+++++++++.||||+||++++|+.++.++.....
T Consensus 162 ~~~~Ad~~~v~a~~~~~~~~~g~~~flV~~~~~~Gv~v-~~~~~~G~~~~~~~~v~fddv~Vp~~~~lg~~~~g~~~~~~ 240 (397)
T 3mpi_A 162 NAAQADVLIYYAYTDKAAGSRGLSAFVIEPRNFPGIKT-SNLEKLGSHASPTGELFLDNVKVPKENILGKPGDGARIVFG 240 (397)
T ss_dssp TTTTCSSEEEEEESCGGGGGGSEEEEEECTTTSTTEEE-EECCCSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHH
T ss_pred CCcccCEEEEEEEcCCCCCCCceEEEEEEcCCCCCeEe-ccCccccCcCCceeEEEEeeEEECHHHcCCCCCchHHHHHH
Confidence 9999999999999876555667999999 999999999 99999999999999999999999999999999999999999
Q ss_pred HHhhhHHHHHHHHHHHHHHHHHHHHHHhhhccccCccCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCcHHHH
Q psy5138 398 FLNQGRIGIAAQMTGLAQGCLDATIPYTLERSQFGHRIFDFQSVQHQISQAATQVECARLLTYNAARLLEAG-QPFIKQA 476 (575)
Q Consensus 398 ~~~~~r~~~~a~~~G~~~~al~~~~~~~~~r~~~g~~l~~~~~~~~~la~~~~~~~aar~~~~~a~~~~~~~-~~~~~~~ 476 (575)
.+...|+.+++.++|+++++++.+++|+++|++||+|++++|.+|++|++|.++++++|++++++++.++.+ .+....+
T Consensus 241 ~~~~~r~~~aa~~lG~a~~al~~a~~~a~~R~~fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~~~~~~~~~~ 320 (397)
T 3mpi_A 241 SLNHTRLSAAAGGVGLAQACLDAAIKYCNERRQFGKPIGDFQMNQDMIAQMAVEVEAARLLAYKAAAAKDEGRLNNGLDV 320 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTEEHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcccCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999987 6677889
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCCCcCCcchhhhhhhhcccccccccccccccccccCCChHHHHhhhhccceeccc
Q psy5138 477 SMAKYFASEMAGHITRQCIDWMGGLGFTKDYPQEKFYRDCKMAGHITRQCIDWMGGLGFTKDYPQEKYYRDCKVGTIYEG 556 (575)
Q Consensus 477 ~~ak~~~~~~~~~~~~~~~~~~G~~~~~~~~p~~R~~RD~~~~~~~~~~~~~~~Gg~g~~~~~~~~~~~rd~~~~~~~~G 556 (575)
+++|+++++.+.++++.++++ |||.||+.+++++++|||++...+++|
T Consensus 321 ~~aK~~a~~~a~~~~~~a~q~--------------------------------~Gg~g~~~~~~~~r~~Rda~~~~i~~G 368 (397)
T 3mpi_A 321 AMAKYAAGEAVSKCANYAMRI--------------------------------LGAYGYSTEYPVARFYRDAPTYYMVEG 368 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH--------------------------------HGGGGGSTTSHHHHHHHHTTHHHHSSS
T ss_pred HHHHHHHHHHHHHHHHHHHHH--------------------------------hCCeeecCCCCHHHHHhhccceeeecC
Confidence 999999999999999999999 999999999999999999999999999
Q ss_pred hHHHHHHHHH-HHH
Q psy5138 557 TSNIQLSTIA-KYI 569 (575)
Q Consensus 557 ~~~~~~~~i~-~~~ 569 (575)
++++++..|+ |.+
T Consensus 369 t~ei~~~~ia~~~l 382 (397)
T 3mpi_A 369 SANICKMIIALDQL 382 (397)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc
Confidence 9999999999 766
No 23
>1r2j_A Protein FKBI; polyketide synthase, polyketide, acyl-COA dehydrogenase, , aldehyde dehydrogenase, oxidoreductase; HET: FAD; 2.10A {Streptomyces hygroscopicus} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=5e-53 Score=432.67 Aligned_cols=309 Identities=25% Similarity=0.359 Sum_probs=286.0
Q ss_pred HHHHHHHHHhhhHHHhchhcCCccHHHHHHHHHhCC--------------------------------------------
Q psy5138 227 SVAKLAKETIAPYVQKMESEEKIDETVLKTLFESGL-------------------------------------------- 262 (575)
Q Consensus 227 ~a~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~G~-------------------------------------------- 262 (575)
.+++|+.+.+.+.+.+.|+.+.+|+++|++|.+.||
T Consensus 3 ~~r~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~ 82 (366)
T 1r2j_A 3 ERDALLTDLVGDRAAEWDTSGELPRDLLVRLGADGLLCAEVAAEHGGLGLGSRENGEFTAHVGSLCSSLRSVMTSQGMAA 82 (366)
T ss_dssp CCHHHHHHHHSSCHHHHHHHTCCCHHHHHHHHHTTTTSTTSCGGGTCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccccHHHHhhcCCCCHHHHHHHHHCCCCCCCCChhhCCCCCCHHHHHHHHHHHHHHChHHHHHHHHHHHHH
Confidence 467899999988888899999999999999999997
Q ss_pred ------CCHHHHHhcccc-cCCCceeEEeecCCCCCCccccceeEEEEeCCEEEEeeeeccccCCccccEEEEEEEeCCC
Q psy5138 263 ------GTTEQKEKYLPR-LAQTDAGSFALSEPGSGSDAFAMKTTATKDGNHYILNGSKMWISNADIANIFLVMANVDVS 335 (575)
Q Consensus 263 ------g~~~~~~~~l~~-~~~~~~~~~~~te~~~gs~~~~~~~~a~~~~~g~~l~G~k~~~s~~~~a~~~~v~a~~~~~ 335 (575)
|+++|+++||++ ++|+ ++++++|||.+|||...+.|+|++++|||+|||+|.|+||+.+|||++|.+++++
T Consensus 83 ~~~l~~g~~~q~~~~l~~~~~G~-~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~~~~- 160 (366)
T 1r2j_A 83 WTVQRLGDAGQRATFLKELTSGK-LAAVGFSERQAGSDLSAMRTRVRLDGDTAVVDGHKVWTTAAAYADHLVVFGLQED- 160 (366)
T ss_dssp HHHHHHSCHHHHHHHHHHTTCC--CEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEETTTTTCSEEEEEEBCSS-
T ss_pred HHHHHhCCHHHHHHHHHHHhCCC-eeEEEeCCCCCCCchhhCEeEEEEeCCEEEEEEEEecccCCcccCEEEEEEEeCC-
Confidence 789999999999 8899 9999999999999999999999999999999999999999999999999999853
Q ss_pred CCCCceEEEEEeCCCCCeeecccCccCCCCCccceeEEEcceeeCCCCcccCCCchHHHH-HHHHhhhHHHHHHHHHHHH
Q psy5138 336 KGYRGITCFIVERSMEGFSVGKKENKLGMKASGTCSLHFDNVRVPEENIISGVGEGYKIA-AGFLNQGRIGIAAQMTGLA 414 (575)
Q Consensus 336 ~~~~~~~~~lv~~~~~gv~i~~~~~~~G~rg~~s~~l~f~~v~Vp~~~~l~~~~~~~~~~-~~~~~~~r~~~~a~~~G~~ 414 (575)
+ ++++|+||++.|||++.+.|+++|+++++++++.||||+||++++||.++.|+... ...+...|+.+++.++|++
T Consensus 161 -~--g~~~flV~~~~~Gv~~~~~~~~~G~r~~~~~~v~f~~v~Vp~~~~lg~~~~g~~~~~~~~l~~~r~~~aa~~~G~a 237 (366)
T 1r2j_A 161 -G--SGAVVVVPADTPGVRVERVPKPSGCRAAGHADLHLDQVRVPAGAVLAGSGASLPMLVAASLAYGRKSVAWGCVGIL 237 (366)
T ss_dssp -S--CCEEEEEETTSTTEEEEECSSCSSSTTSCCEEEEEEEEEEEGGGBCTTTTSCTTTTTHHHHHHHHHHHHHHHHHHH
T ss_pred -C--ceEEEEEECCCCCeEecCCcCCccCCCCCeeEEEEeeEEEcHHHcCCCCCccHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 2 78999999999999999999999999999999999999999999999988898877 7888999999999999999
Q ss_pred HHHHHHHHHHhhhccccCccCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCcHHHHHHHHHHHHHHHHHHHHH
Q psy5138 415 QGCLDATIPYTLERSQFGHRIFDFQSVQHQISQAATQVECARLLTYNAARLLEAG-QPFIKQASMAKYFASEMAGHITRQ 493 (575)
Q Consensus 415 ~~al~~~~~~~~~r~~~g~~l~~~~~~~~~la~~~~~~~aar~~~~~a~~~~~~~-~~~~~~~~~ak~~~~~~~~~~~~~ 493 (575)
+++++.+++|+++|++||+||+++|.+|++|++|.++++++|++++++++.++.+ .+....++++|+++++.+.++++.
T Consensus 238 ~~al~~a~~ya~~R~~fg~~i~~~q~v~~~la~~~~~~~~ar~~~~~aa~~~~~g~~~~~~~~~~aK~~a~~~a~~~~~~ 317 (366)
T 1r2j_A 238 RACRTAAVAHARTREQFGRPLGDHQLVAGHIADLWTAEQIAARVCEYASDHWDEGSPEMVPATILAKHVAAERAAAGAAT 317 (366)
T ss_dssp HHHHHHHHHHHTTCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHC-------CHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCccCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCcchHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999876 566778999999999999999999
Q ss_pred HHhhcCCCCCCcCCcchhhhhhhhcccccccccccccccccccCCChHHHHhhhhccceeccchHHHHHHHHHHHHHhh
Q psy5138 494 CIDWMGGLGFTKDYPQEKFYRDCKMAGHITRQCIDWMGGLGFTKDYPQEKYYRDCKVGTIYEGTSNIQLSTIAKYIAKE 572 (575)
Q Consensus 494 ~~~~~G~~~~~~~~p~~R~~RD~~~~~~~~~~~~~~~Gg~g~~~~~~~~~~~rd~~~~~~~~G~~~~~~~~i~~~~~~~ 572 (575)
++|+ |||.||+.++++++++||++...+++|++++++..|++.+++.
T Consensus 318 a~q~--------------------------------~Gg~g~~~~~~~~r~~Rda~~~~~~~G~~~~~~~~ia~~~lgl 364 (366)
T 1r2j_A 318 AAQV--------------------------------LASAGAREGHVVERAYRDAKLMEIIEGSSEMCRVMLAQHALAL 364 (366)
T ss_dssp HHHH--------------------------------HGGGGC--CCHHHHHHHHHHHHHHSSSCHHHHHHHHHHHHTTC
T ss_pred HHHh--------------------------------hCCeeecCCCcHHHHHHhccCceecCCHHHHHHHHHHHHHhcC
Confidence 9999 9999999999999999999999999999999999999998763
No 24
>1siq_A GCD, glutaryl-COA dehydrogenase; acyl-COA dehydrogenase, decarboxylation, flavin protein, oxidoreductase; HET: FAD; 2.10A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1 PDB: 2r0n_A* 1sir_A* 2r0m_A*
Probab=100.00 E-value=2.2e-51 Score=424.63 Aligned_cols=318 Identities=29% Similarity=0.470 Sum_probs=300.2
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhhHHHhchhcCCccHHHHHHHHHhCC--------------------------------
Q psy5138 215 FIKQASMAKYFASVAKLAKETIAPYVQKMESEEKIDETVLKTLFESGL-------------------------------- 262 (575)
Q Consensus 215 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~G~-------------------------------- 262 (575)
+++++.+++ +.+++|+.+.+.+...+.|+.+.+|+++|++|.+.||
T Consensus 14 ~~~e~~~l~--~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~~l~~~~~GG~g~~~~~~~~~~eel~~~~~~~ 91 (392)
T 1siq_A 14 LTTDEILIR--DTFRTYCQERLMPRILLANRNEVFHREIISEMGELGVLGPTIKGYGCAGVSSVAYGLLARELERVDSGY 91 (392)
T ss_dssp SCHHHHHHH--HHHHHHHHHHTHHHHHHHHHHTCCCTHHHHHHHHTTCSSTTCEETTEECCCHHHHHHHHHHHHTTCHHH
T ss_pred CCHHHHHHH--HHHHHHHHHhcCcchHHHHhhCCCCHHHHHHHHhCCCCcccHHhhCCCCCCHHHHHHHHHHHHHhCcHH
Confidence 567788888 9999999999999888888899999999999999997
Q ss_pred ------------------CCHHHHHhcccc-cCCCceeEEeecCCCCCCccccceeEEEEe--CCEEEEeeeeccccCCc
Q psy5138 263 ------------------GTTEQKEKYLPR-LAQTDAGSFALSEPGSGSDAFAMKTTATKD--GNHYILNGSKMWISNAD 321 (575)
Q Consensus 263 ------------------g~~~~~~~~l~~-~~~~~~~~~~~te~~~gs~~~~~~~~a~~~--~~g~~l~G~k~~~s~~~ 321 (575)
|+++|+++|+++ ++|+.++++++|||+.|||+..+.|+|+++ +|||+|||+|.|+||+.
T Consensus 92 ~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~l~~g~~~~~~a~tEp~~gsd~~~~~t~A~~~~~~~g~~lnG~K~~vs~~~ 171 (392)
T 1siq_A 92 RSAMSVQSSLVMHPIYAYGSEEQRQKYLPQLAKGELLGCFGLTEPNSGSDPSSMETRAHYNSSNKSYTLNGTKTWITNSP 171 (392)
T ss_dssp HHHHHHHHHTTHHHHHHHSCHHHHHHHHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEEETTTTEEEEEEEEEEEETGG
T ss_pred HHHHHHHHhHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEECCCCCCcCccccEEEEEEeCCCCEEEEEEEEEeecCCc
Confidence 899999999999 899999999999999999999999999999 99999999999999999
Q ss_pred cccEEEEEEEeCCCCCCCceEEEEEeCCCCCeeecccCccCCCCCccceeEEEcceeeCCCCcccCCCchHHHHHHHHhh
Q psy5138 322 IANIFLVMANVDVSKGYRGITCFIVERSMEGFSVGKKENKLGMKASGTCSLHFDNVRVPEENIISGVGEGYKIAAGFLNQ 401 (575)
Q Consensus 322 ~a~~~~v~a~~~~~~~~~~~~~~lv~~~~~gv~i~~~~~~~G~rg~~s~~l~f~~v~Vp~~~~l~~~~~~~~~~~~~~~~ 401 (575)
+|||++|.+++++ .++++|+||++.|||++.+.|+++|+++++++++.||||+||++++++.. .|+......+..
T Consensus 172 ~Ad~~~v~a~~~~----g~~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~-~g~~~~~~~l~~ 246 (392)
T 1siq_A 172 MADLFVVWARCED----GCIRGFLLEKGMRGLSAPRIQGKFSLRASATGMIIMDGVEVPEENVLPGA-SSLGGPFGCLNN 246 (392)
T ss_dssp GCSEEEEEEEETT----SCEEEEEEETTCTTEECCBCCCCSSSTTSCEEEEEEEEEEEEGGGBCTTC-CSSHHHHHHHHH
T ss_pred ccCEEEEEEEECC----CCEEEEEEeCCCCCeEeccccccccccCCceEEEEEccEEECHHHcCCcc-cCHHHHHHHHHH
Confidence 9999999999862 24889999999999999999999999999999999999999999999875 577777778888
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhccccCccCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHH
Q psy5138 402 GRIGIAAQMTGLAQGCLDATIPYTLERSQFGHRIFDFQSVQHQISQAATQVECARLLTYNAARLLEAGQPFIKQASMAKY 481 (575)
Q Consensus 402 ~r~~~~a~~~G~~~~al~~~~~~~~~r~~~g~~l~~~~~~~~~la~~~~~~~aar~~~~~a~~~~~~~~~~~~~~~~ak~ 481 (575)
.|+.+++.++|+++++++.+++|+++|++||+||+++|.+|++|++|.++++++|++++++++.++.+.+....++++|.
T Consensus 247 ~r~~~aa~~~G~a~~al~~a~~ya~~R~~fG~~i~~~q~vq~~la~~~~~~~~ar~~~~~aa~~~d~~~~~~~~~~~aK~ 326 (392)
T 1siq_A 247 ARYGIAWGVLGASEFCLHTARQYALDRMQFGVPLARNQLIQKKLADMLTEITLGLHACLQLGRLKDQDKAAPEMVSLLKR 326 (392)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCeeCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999987777778899999
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCcCCcchhhhhhhhcccccccccccccccccccCCChHHHHhhhhccceeccchHHHH
Q psy5138 482 FASEMAGHITRQCIDWMGGLGFTKDYPQEKFYRDCKMAGHITRQCIDWMGGLGFTKDYPQEKYYRDCKVGTIYEGTSNIQ 561 (575)
Q Consensus 482 ~~~~~~~~~~~~~~~~~G~~~~~~~~p~~R~~RD~~~~~~~~~~~~~~~Gg~g~~~~~~~~~~~rd~~~~~~~~G~~~~~ 561 (575)
++++.+.++++.++|+ |||.||+.++|+++++||++...+++|+++++
T Consensus 327 ~~~~~a~~v~~~a~q~--------------------------------~Gg~g~~~~~~l~r~~Rd~~~~~~~~G~~~~~ 374 (392)
T 1siq_A 327 NNCGKALDIARQARDM--------------------------------LGGNGISDEYHVIRHAMNLEAVNTYEGTHDIH 374 (392)
T ss_dssp HHHHHHHHHHHHHHHH--------------------------------TGGGGGSGGGSHHHHHHHHHHHTTSSSCHHHH
T ss_pred HHHHHHHHHHHHHHHH--------------------------------hCCccccCCCcHHHHHhhCcCCeeecCcHHHH
Confidence 9999999999999999 99999999999999999999999999999999
Q ss_pred HHHHHHHHHh
Q psy5138 562 LSTIAKYIAK 571 (575)
Q Consensus 562 ~~~i~~~~~~ 571 (575)
+..|++.+++
T Consensus 375 ~~~i~~~llg 384 (392)
T 1siq_A 375 ALILGRAITG 384 (392)
T ss_dssp HHHHHHHHHS
T ss_pred HHHHHHHHhC
Confidence 9999999875
No 25
>2wbi_A Acyl-COA dehydrogenase family member 11; human, phosphoprotein, oxidoreducta; HET: FAD; 2.80A {Homo sapiens}
Probab=100.00 E-value=1e-51 Score=431.32 Aligned_cols=326 Identities=26% Similarity=0.430 Sum_probs=297.4
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhhHHH---hchhc-----C-----CccHHHHHHHHHhCC-------------------
Q psy5138 215 FIKQASMAKYFASVAKLAKETIAPYVQ---KMESE-----E-----KIDETVLKTLFESGL------------------- 262 (575)
Q Consensus 215 ~~~~~~~~~~~~~a~~~~~~~~~~~~~---~~d~~-----~-----~~~~~~~~~l~~~G~------------------- 262 (575)
+++++.+++ +.+++|+.+++.|... +.++. . .+|+++|++|.+.||
T Consensus 23 ~~~e~~~l~--~~~r~f~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~~l~~P~G~g~~~~~~~~v 100 (428)
T 2wbi_A 23 QTRKGQEVL--IKVKHFMKQHILPAEKEVTEFYVQNENSVDKWGKPLVIDKLKEMAKVEGLWNLFLPAVSGLSHVDYALI 100 (428)
T ss_dssp CCHHHHHHH--HHHHHHHHHTHHHHHHHHHC----------CCSCCHHHHHHHHHHHHTTCCSTTCHHHHCCCHHHHHHH
T ss_pred CCHHHHHHH--HHHHHHHHhhCCchhcchhHHhhhccccccccCCcccHHHHHHHHHHCCCCeecCCCCCCCCHHHHHHH
Confidence 567888888 8999999998877665 54432 2 256889999999886
Q ss_pred ------------------------------CCHHHHHhcccc-cCCCceeEEeecCCC-CCCccccceeEEEEeCCEEEE
Q psy5138 263 ------------------------------GTTEQKEKYLPR-LAQTDAGSFALSEPG-SGSDAFAMKTTATKDGNHYIL 310 (575)
Q Consensus 263 ------------------------------g~~~~~~~~l~~-~~~~~~~~~~~te~~-~gs~~~~~~~~a~~~~~g~~l 310 (575)
|+++|+++||++ ++|+.++|+++|||+ +|||..++.|+|++++|||+|
T Consensus 101 ~eel~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~qk~~~l~~l~~G~~~~~~a~tEp~~aGsd~~~~~t~A~~~~~g~~l 180 (428)
T 2wbi_A 101 AEETGKCFFAPDVFNCQAPDTGNMEVLHLYGSEEQKKQWLEPLLQGNITSCFCMTEPDVASSDATNIECSIQRDEDSYVI 180 (428)
T ss_dssp HHHHTTSTTHHHHTTCCTTHHHHHHHHHHHCCHHHHHHTHHHHHHTSSEEEEECCCTTSCTTSGGGCCCEEEEETTEEEE
T ss_pred HHHHHhhcchhhhHhhhccchhHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEEecCCcCCCCcccceEEEEEeCCEEEE
Confidence 899999999999 899999999999999 999999999999999999999
Q ss_pred eeeeccccCCcc--ccEEEEEEEeCCCC--CCCceEEEEEeCCCCCeeecccCccCCCCCcc---ceeEEEcceeeCCCC
Q psy5138 311 NGSKMWISNADI--ANIFLVMANVDVSK--GYRGITCFIVERSMEGFSVGKKENKLGMKASG---TCSLHFDNVRVPEEN 383 (575)
Q Consensus 311 ~G~k~~~s~~~~--a~~~~v~a~~~~~~--~~~~~~~~lv~~~~~gv~i~~~~~~~G~rg~~---s~~l~f~~v~Vp~~~ 383 (575)
||+|.|+||+.+ |||++|.+++++++ +..++++|+||++.|||++.+.|+++|+++++ ++++.||||+||+++
T Consensus 181 nG~K~~is~a~~~~Ad~~~v~art~~~~~~~~~g~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~~~~v~fddv~VP~~~ 260 (428)
T 2wbi_A 181 NGKKWWSSGAGNPKCKIAIVLGRTQNTSLSRHKQHSMILVPMNTPGVKIIRPLSVFGYTDNFHGGHFEIHFNQVRVPATN 260 (428)
T ss_dssp EEEEEEEETTTSTTEEEEEEEEECCCTTSCGGGCEEEEEEETTSTTEEEEEECCBTTBCCGGGCCEEEEEEEEEEEEGGG
T ss_pred EeEEeccCCCCCCcCCEEEEEEEeCCccCCCCCceEEEEEECCCCcEEecCCCCccccCCCCCCCeEEEEeCceEECHHH
Confidence 999999999988 99999999986442 34578999999999999999999999999994 999999999999999
Q ss_pred cccCCCchHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhhhccccCccCccchhHHHHHHHHHHHHHHHHHHHHHHH
Q psy5138 384 IISGVGEGYKIAAGFLNQGRIGIAAQMTGLAQGCLDATIPYTLERSQFGHRIFDFQSVQHQISQAATQVECARLLTYNAA 463 (575)
Q Consensus 384 ~l~~~~~~~~~~~~~~~~~r~~~~a~~~G~~~~al~~~~~~~~~r~~~g~~l~~~~~~~~~la~~~~~~~aar~~~~~a~ 463 (575)
+||.++.|+......+...|+.+++.++|+++++++.+++|+++|++||+||+++|.+|++|++|.++++++|+++++++
T Consensus 261 ~lg~~g~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fG~~i~~~q~vq~~la~~~~~~~aar~~~~~aa 340 (428)
T 2wbi_A 261 LILGEGRGFEISQGRLGPGRIHHCMRTVGLAERALQIMCERATQRIAFKKKLYAHEVVAHWIAESRIAIEKIRLLTLKAA 340 (428)
T ss_dssp BCSCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hcCCccchHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhhCcccCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998888899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHc-C-CCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcCCcchhhhhhhhcccccccccccccccccccCCChH
Q psy5138 464 RLLEA-G-QPFIKQASMAKYFASEMAGHITRQCIDWMGGLGFTKDYPQEKFYRDCKMAGHITRQCIDWMGGLGFTKDYPQ 541 (575)
Q Consensus 464 ~~~~~-~-~~~~~~~~~ak~~~~~~~~~~~~~~~~~~G~~~~~~~~p~~R~~RD~~~~~~~~~~~~~~~Gg~g~~~~~~~ 541 (575)
+.++. + .+....++++|+++++.+.++++.++|+ |||.||+.++++
T Consensus 341 ~~~d~~g~~~~~~~~~~aK~~a~e~a~~v~~~a~q~--------------------------------~Gg~G~~~~~~~ 388 (428)
T 2wbi_A 341 HSMDTLGSAGAKKEIAMIKVAAPRAVSKIVDWAIQV--------------------------------CGGAGVSQDYPL 388 (428)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHH--------------------------------TGGGGGSTTSSH
T ss_pred HHHhccCCcchHHHHHHHHHHHHHHHHHHHHHHHHH--------------------------------hCCcccCCCCcH
Confidence 99886 2 3456788999999999999999999999 999999999999
Q ss_pred HHHhhhhccceeccchHHHHHHHHHHHHHhhhc
Q psy5138 542 EKYYRDCKVGTIYEGTSNIQLSTIAKYIAKEYT 574 (575)
Q Consensus 542 ~~~~rd~~~~~~~~G~~~~~~~~i~~~~~~~~~ 574 (575)
+++|||++...+++|++++++..|++.++++|.
T Consensus 389 ~r~~Rda~~~~i~~G~~~~~~~~ia~~~l~~~~ 421 (428)
T 2wbi_A 389 ANMYAITRVLRLADGPDEVHLSAIATMELRDQA 421 (428)
T ss_dssp HHHHHHHHHHTTTTSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhcEecCChHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999998874
No 26
>2z1q_A Acyl-COA dehydrogenase; FAD, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: FAD; 2.30A {Thermus thermophilus}
Probab=100.00 E-value=2.1e-51 Score=442.64 Aligned_cols=322 Identities=36% Similarity=0.614 Sum_probs=298.1
Q ss_pred CchHHHHHHHHHHHHHHHHHHHhhhHHHhchh-cCCccHHHHHHHHHhCC------------------------------
Q psy5138 214 PFIKQASMAKYFASVAKLAKETIAPYVQKMES-EEKIDETVLKTLFESGL------------------------------ 262 (575)
Q Consensus 214 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~d~-~~~~~~~~~~~l~~~G~------------------------------ 262 (575)
.+++++.++. ..+++|+.+.+.+..++.+. ...+|+++|+.|.+.||
T Consensus 27 ~~~~e~~~l~--~~~~~~~~~~~~p~~~~~~~~~~~~p~~~~~~l~e~Gl~~l~vPee~GG~g~~~~~~~~v~eel~~~~ 104 (577)
T 2z1q_A 27 DFDESVKEIA--RTTRTFVEREVLPLLERMEHGELELNVPLMRKAGELGLLAIDVPEEYGGLDLPKVISTVVAEELSGSG 104 (577)
T ss_dssp GCCHHHHHHH--HHHHHHHHTTTHHHHHHHHTTCGGGHHHHHHHHHHTTTTSTTSCGGGTCCCCCHHHHHHHHHHHTTSC
T ss_pred CCCHHHHHHH--HHHHHHHhccCchhHHhhhcccCCCCHHHHHHHHHCCCCCcCCChhhCCCCCCHHHHHHHHHHHhhcc
Confidence 4577777887 89999999988887655553 34799999999999997
Q ss_pred --------------------CCHHHHHhcccc-cCCCceeEEeecCCCCCCccccceeEEEE--eCCEEEEeeeeccccC
Q psy5138 263 --------------------GTTEQKEKYLPR-LAQTDAGSFALSEPGSGSDAFAMKTTATK--DGNHYILNGSKMWISN 319 (575)
Q Consensus 263 --------------------g~~~~~~~~l~~-~~~~~~~~~~~te~~~gs~~~~~~~~a~~--~~~g~~l~G~k~~~s~ 319 (575)
|+++|+++|||+ ++|+.++|+++|||++|||...+.|+|++ ++++|+|||+|.|+||
T Consensus 105 s~~~~~~~~~~~~~~~l~~~Gt~eQk~~~Lp~l~~G~~~~a~alTEp~aGSD~~~~~t~A~~~~dG~~~vLnG~K~~it~ 184 (577)
T 2z1q_A 105 GFSVTYGAHTSIGTLPLVYFGTEEQKRKYLPKLASGEWIAAYCLTEPGSGSDALAAKTRATLSEDGKHYILNGVKQWISN 184 (577)
T ss_dssp THHHHHHHHHTTTTHHHHHHCCHHHHHTTHHHHHHTSSCEEEECCBTTBSSSGGGCCCEEEECTTSSEEEEEEEEEEEET
T ss_pred cHHHHHhhhHHHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEecCCCCCCCcccCeeEEEEeCCCCEEEEEEEeeCCCC
Confidence 899999999999 89999999999999999999999999998 4568999999999999
Q ss_pred CccccEEEEEEEeCCCCCCCceEEEEEeCCCCCeeecccCccCCCCCccceeEEEcceeeCCCCcccCCCchHHHHHHHH
Q psy5138 320 ADIANIFLVMANVDVSKGYRGITCFIVERSMEGFSVGKKENKLGMKASGTCSLHFDNVRVPEENIISGVGEGYKIAAGFL 399 (575)
Q Consensus 320 ~~~a~~~~v~a~~~~~~~~~~~~~~lv~~~~~gv~i~~~~~~~G~rg~~s~~l~f~~v~Vp~~~~l~~~~~~~~~~~~~~ 399 (575)
+..||+++|++++++ .++++|+||++.|||++.+.|+++|+++++++++.|+||+||.+++||..+.|+......+
T Consensus 185 a~~Ad~~~V~Ar~~g----~gis~flVp~~~pGv~v~~~~~~~G~~~~~~~~v~fddv~VP~~~llg~~g~g~~~~~~~l 260 (577)
T 2z1q_A 185 AGFAHLFTVFAKVDG----EHFTAFLVERDTPGLSFGPEEKKMGIKASSTRQVILEDVKVPVENVLGEIGKGHKIAFNVL 260 (577)
T ss_dssp TTTCSEEEEEEEETT----TEEEEEEEETTCTTEEECCCCCBSSCTTSCEEEEEEEEEEEEGGGEESCTTCTHHHHHHHH
T ss_pred CCccCEEEEEEEeCC----CeeEEEEEeCCCCCeEecCCCCCCCCCCCceeEEEecceeccHHHccCCCCchHHHHHHHH
Confidence 999999999999862 5789999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhhhccccCccCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcC----------
Q psy5138 400 NQGRIGIAAQMTGLAQGCLDATIPYTLERSQFGHRIFDFQSVQHQISQAATQVECARLLTYNAARLLEAG---------- 469 (575)
Q Consensus 400 ~~~r~~~~a~~~G~~~~al~~~~~~~~~r~~~g~~l~~~~~~~~~la~~~~~~~aar~~~~~a~~~~~~~---------- 469 (575)
..+|+.+++.++|+++++++.+++|+++|+|||+||+++|.+|++|++|.+.++++|+++++++..++.+
T Consensus 261 ~~~R~~~aa~~~G~a~~al~~a~~ya~~R~qfg~pi~~~q~vq~~La~~~~~~~aar~~~~~aa~~~d~~~~~~~~~~~~ 340 (577)
T 2z1q_A 261 NVGRYKLGAGAVGGAKRALELSAQYATQRVQFGRPIGRFGLIQQKLGEMASRIYAAESAVYRTVGLIDEALLGKKGPEAV 340 (577)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCBCSSSBGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCccCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccchhh
Confidence 9999999999999999999999999999999999999999999999999999999999999999988764
Q ss_pred ----CCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcCCcchhhhhhhhcccccccccccccccccccCCChHHHHh
Q psy5138 470 ----QPFIKQASMAKYFASEMAGHITRQCIDWMGGLGFTKDYPQEKFYRDCKMAGHITRQCIDWMGGLGFTKDYPQEKYY 545 (575)
Q Consensus 470 ----~~~~~~~~~ak~~~~~~~~~~~~~~~~~~G~~~~~~~~p~~R~~RD~~~~~~~~~~~~~~~Gg~g~~~~~~~~~~~ 545 (575)
.+....++++|+++++.+.++++.++|+ |||.||+.+++++++|
T Consensus 341 ~~~~~~~~~~~a~aK~~ase~a~~v~~~a~qi--------------------------------~GG~G~~~e~~l~r~~ 388 (577)
T 2z1q_A 341 MAGIEEYAVEASIIKVLGSEVLDYVVDEGVQI--------------------------------HGGYGYSQEYPIERAY 388 (577)
T ss_dssp HHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHH--------------------------------HGGGGGBTTSHHHHHH
T ss_pred hhcchhhHHHHHHHHHHHHHHHHHHHHHHHHH--------------------------------hCCeeecCCChHHHHH
Confidence 2334678899999999999999999999 9999999999999999
Q ss_pred hhhccceeccchHHHHHHHHHHHHHhhh
Q psy5138 546 RDCKVGTIYEGTSNIQLSTIAKYIAKEY 573 (575)
Q Consensus 546 rd~~~~~~~~G~~~~~~~~i~~~~~~~~ 573 (575)
||++...+++|++++++..|++.+++++
T Consensus 389 Rda~~~~i~eGt~~i~~~~ia~~~l~~~ 416 (577)
T 2z1q_A 389 RDARINRIFEGTNEINRLLIPGMLLRRA 416 (577)
T ss_dssp HHHGGGGTTTSCHHHHHHHTTGGGSCC-
T ss_pred hhCcceeeeCcHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999887764
No 27
>3mkh_A Nitroalkane oxidase; oxidoreductase flavoenzyme, acyl-COA dehydrogen flavoprotein, oxidoreductase; HET: FAD; 2.00A {Podospora anserina}
Probab=100.00 E-value=4.3e-50 Score=421.15 Aligned_cols=323 Identities=24% Similarity=0.365 Sum_probs=295.9
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhhHHHhch----hcC-Ccc--HHHHHHHHHhCC-------------------------
Q psy5138 215 FIKQASMAKYFASVAKLAKETIAPYVQKME----SEE-KID--ETVLKTLFESGL------------------------- 262 (575)
Q Consensus 215 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~d----~~~-~~~--~~~~~~l~~~G~------------------------- 262 (575)
+++++.+++ +.+++|+.+.+.+...+.+ ..+ .|| +++|++|.+.||
T Consensus 7 ~~~e~~~l~--~~~r~f~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~ee 84 (438)
T 3mkh_A 7 LSASQKGTY--QAARSLARNLLMPARQTYLQHPPNSPLRFQSTQPTYAAAVSAGILKGQISPAHGGTGGTLIESAILVEE 84 (438)
T ss_dssp CCHHHHHHH--HHHHHHHHHTHHHHHHHHTTSCTTCHHHHHTTHHHHHHHHHTTTTGGGSCGGGTCCCCCHHHHHHHHHH
T ss_pred CCHHHHHHH--HHHHHHHHHhcCcHHHHHhhccccccCcCCCcHHHHHHHHhCCCCCCCCCcccCCCCCCHHHHHHHHHH
Confidence 578888898 9999999999988776654 333 677 899999999998
Q ss_pred -------------------------CCHHHHHhcccc-cCC--CceeEEeecCCCCCC-----ccccceeEEEEeCCEEE
Q psy5138 263 -------------------------GTTEQKEKYLPR-LAQ--TDAGSFALSEPGSGS-----DAFAMKTTATKDGNHYI 309 (575)
Q Consensus 263 -------------------------g~~~~~~~~l~~-~~~--~~~~~~~~te~~~gs-----~~~~~~~~a~~~~~g~~ 309 (575)
|+++ +++||++ ++| +.++|+++|||++|| |+.++.|+|++++|||+
T Consensus 85 la~~~~~~~~~~~~~~~~~~~l~~~g~~~-~~~~l~~~~~G~g~~~~~~a~tEp~~gs~~~~sd~~~~~t~A~~~g~g~~ 163 (438)
T 3mkh_A 85 CYSVEPSAALTIFATGLGLTPINLAAGPQ-HAEFLAPFLSGEGSPLASLVFSEPGGVANALEKGAPGFQTTARLEGDEWV 163 (438)
T ss_dssp HHHHCHHHHHHHHHHHHHHHHHHHHCCGG-GHHHHGGGSSSCSCCCEEEECCCTTCCTTTTCTTSCCCSCEEEEETTEEE
T ss_pred HHhhChhHHHHHHHhhHHHHHHHhhCCHH-HHHHHHHHhcCCCCceEEEEEccCCCCCCccccccccceeEEEEeCCEEE
Confidence 8888 8899999 775 579999999999998 68889999999999999
Q ss_pred EeeeeccccCCc-----cccEEEEEEEeCC------CCCCCceEEEEEeCCC-----CC-eeecccCccCCCCCccceeE
Q psy5138 310 LNGSKMWISNAD-----IANIFLVMANVDV------SKGYRGITCFIVERSM-----EG-FSVGKKENKLGMKASGTCSL 372 (575)
Q Consensus 310 l~G~k~~~s~~~-----~a~~~~v~a~~~~------~~~~~~~~~~lv~~~~-----~g-v~i~~~~~~~G~rg~~s~~l 372 (575)
|||+|.|+||+. +||+++|.+++.. .++..++++|+||++. || |++.+.|+++|+++++++++
T Consensus 164 lnG~K~~is~a~~~~~~~Ad~~~v~a~~~~~~~~~~~~~~~g~~~flV~~~~~~~~~pG~v~v~~~~~~~G~r~~~~~~v 243 (438)
T 3mkh_A 164 INGEKMWATNCAGWDFKGCDLACVVCRDATTPLEEGQDPENKVMIILVTRADLDRNGEGSFEVLRHVATPGHTSVSGPHV 243 (438)
T ss_dssp EEEEECSCTTTTCTTSSCCSEEEEEEEECSSCCCTTCCGGGGEEEEEEEHHHHHHHCTTSEEEEECCCCSSCTTCCCCEE
T ss_pred EEeEEEEecCCCccccccCcEEEEEEEecCcccCcccCCCCceEEEEEecCccccCCCCcEEecCcCCCcCCcCCCceEE
Confidence 999999999997 8999999999863 1223578999999875 88 99999999999999999999
Q ss_pred EEcceeeCCCCcccCCCchHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhhhccccC-ccCccchhHHHHHHHHHHH
Q psy5138 373 HFDNVRVPEENIISGVGEGYKIAAGFLNQGRIGIAAQMTGLAQGCLDATIPYTLERSQFG-HRIFDFQSVQHQISQAATQ 451 (575)
Q Consensus 373 ~f~~v~Vp~~~~l~~~~~~~~~~~~~~~~~r~~~~a~~~G~~~~al~~~~~~~~~r~~~g-~~l~~~~~~~~~la~~~~~ 451 (575)
.||||+||++++||.++.|+......+...|+.+++.++|+++++++.+++|+++|++|| +||+++|.+|++|++|.++
T Consensus 244 ~fddv~VP~~~~lg~~~~g~~~~~~~l~~~r~~~aa~~lG~a~~al~~a~~ya~~R~~~g~~pi~~~q~vq~~la~~~~~ 323 (438)
T 3mkh_A 244 RYTNVRVPTKNVLCPAGQGAKVAFGAFDGSAVLVGAMGVGLMRAAFDAALKFAKEDNRGGAVPLLERQAFADLLSGVKIQ 323 (438)
T ss_dssp EEEEEEEEGGGEEECTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCSSCGGGSHHHHHHHHHHHHH
T ss_pred EECcEEECHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcEeCCCeeccccHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCCc----HHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcCCcchhhhhhhhcccccccccc
Q psy5138 452 VECARLLTYNAARLLEAGQPF----IKQASMAKYFASEMAGHITRQCIDWMGGLGFTKDYPQEKFYRDCKMAGHITRQCI 527 (575)
Q Consensus 452 ~~aar~~~~~a~~~~~~~~~~----~~~~~~ak~~~~~~~~~~~~~~~~~~G~~~~~~~~p~~R~~RD~~~~~~~~~~~~ 527 (575)
++++|++++++++.++.+.+. ...++++|+++++.+.++++.++|+
T Consensus 324 ~~aar~~~~~aa~~~d~~~~~~~~~~~~~~~aK~~a~e~a~~~~~~a~q~------------------------------ 373 (438)
T 3mkh_A 324 TEAARALTWKAAHAMENGPGDYDARRELALAAKVFCSEAAVKACTDVINA------------------------------ 373 (438)
T ss_dssp HHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------------------------
T ss_pred HHHHHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHH------------------------------
Confidence 999999999999999987543 2236789999999999999999999
Q ss_pred cccccccccCCChHHHHhhhhccceeccchH-HHHHHHHHHHHHhh
Q psy5138 528 DWMGGLGFTKDYPQEKYYRDCKVGTIYEGTS-NIQLSTIAKYIAKE 572 (575)
Q Consensus 528 ~~~Gg~g~~~~~~~~~~~rd~~~~~~~~G~~-~~~~~~i~~~~~~~ 572 (575)
|||.||+.++|++|+|||++...+++|++ ++++.+|+|.++++
T Consensus 374 --~Gg~G~~~~~~l~r~~Rda~~~~i~~Gt~~~v~~~~i~r~ll~~ 417 (438)
T 3mkh_A 374 --VGISAYDLQRPFSDLLNTAVVLPIFDGGNVGIRRRHLQQLMLKP 417 (438)
T ss_dssp --HGGGGGCTTSSHHHHHHHHTHHHHSSSCTTTTHHHHHHHHHHST
T ss_pred --hchhhccCCCcHHHHHHHhheeeeecCChHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999 99999999999987
No 28
>2c12_A Nitroalkane oxidase; oxidoreductase, flavoenzyme, acyl-COA dehydrogenase, long cell EDGE, FAD, inhibitor, flavoprotein; HET: SPM FAD PE4; 2.07A {Fusarium oxysporum} SCOP: a.29.3.1 e.6.1.1 PDB: 2c0u_A* 2zaf_A* 2reh_A* 3d9g_A* 3d9f_A* 3d9d_A* 3d9e_A* 3fcj_A*
Probab=100.00 E-value=5.6e-49 Score=412.59 Aligned_cols=322 Identities=18% Similarity=0.304 Sum_probs=293.2
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhhHHHhchhc----CCcc--HHHHHHHHHhCC--------------------------
Q psy5138 215 FIKQASMAKYFASVAKLAKETIAPYVQKMESE----EKID--ETVLKTLFESGL-------------------------- 262 (575)
Q Consensus 215 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~d~~----~~~~--~~~~~~l~~~G~-------------------------- 262 (575)
+++++.+++ ..+++|+.+++.+...+.|+. +.+| +++|++|.+.||
T Consensus 6 ~~~e~~~l~--~~~r~f~~~~~~p~~~~~d~~~~~~~~~~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eel 83 (439)
T 2c12_A 6 LSPSQLEAR--RHAQAFANTVLTKASAEYSTQKDQLSRFQATRPFYREAVRHGLIKAQVPIPLGGTMESLVHESIILEEL 83 (439)
T ss_dssp CCHHHHHHH--HHHHHHHHHTGGGHHHHHTTCSSHHHHHHTTHHHHHHHHHTTTTGGGSBGGGTCCBCCHHHHHHHHHHH
T ss_pred CCHHHHHHH--HHHHHHHHHhCChhHHHHhhcccccCCCCChHHHHHHHHHCCCCCCCCChhhCCCCCCHHHHHHHHHHH
Confidence 567888888 999999999998887776653 4677 899999999997
Q ss_pred ------------------------CCHHHHHhcccc-c--CCCceeEEeecCCCCCC-----ccccceeEEEEeCCEEEE
Q psy5138 263 ------------------------GTTEQKEKYLPR-L--AQTDAGSFALSEPGSGS-----DAFAMKTTATKDGNHYIL 310 (575)
Q Consensus 263 ------------------------g~~~~~~~~l~~-~--~~~~~~~~~~te~~~gs-----~~~~~~~~a~~~~~g~~l 310 (575)
|+++|+++||++ + .|+.++++++|||.+|| |...+.|+|++++|||+|
T Consensus 84 a~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~~~G~~~~~~a~tEp~~Gs~~~~sd~~~~~t~A~~~~~g~~l 163 (439)
T 2c12_A 84 FAVEPATSITIVATALGLMPVILCDSPSLQEKFLKPFISGEGEPLASLMHSEPNGTANWLQKGGPGLQTTARKVGNEWVI 163 (439)
T ss_dssp HTTCCTTHHHHHHHHHHHHHHHHSSCHHHHHHHTGGGGSSCSCCCEEEECCCTTCSTTTTCTTSCCCSCEEEEETTEEEE
T ss_pred HhhChHHHHHHHHhHHHHHHHHHhCCHHHHHHHHHHHhhcCCCEEEEEEecCCCCCCCccccccccceeEEEEcCCEEEE
Confidence 899999999999 6 58899999999999987 577789999999999999
Q ss_pred eeeeccccCCc-----cccEEEEEEEe-C----CC----CCCCceEEEEEeCCCC------CeeecccCccCCCCCccce
Q psy5138 311 NGSKMWISNAD-----IANIFLVMANV-D----VS----KGYRGITCFIVERSME------GFSVGKKENKLGMKASGTC 370 (575)
Q Consensus 311 ~G~k~~~s~~~-----~a~~~~v~a~~-~----~~----~~~~~~~~~lv~~~~~------gv~i~~~~~~~G~rg~~s~ 370 (575)
||+|.|+||+. +||+++|++++ + ++ ++..++++|+||++.| |+++.+.|+++|+++++++
T Consensus 164 nG~K~~is~~~~~~~~~Ad~~~v~ar~~~~~~~~~~~~~~~~~g~~~flV~~~~pGv~~~~Gv~v~~~~~~~G~r~~~~~ 243 (439)
T 2c12_A 164 SGEKLWPSNSGGWDYKGADLACVVCRVSDDPSKPQDPNVDPATQIAVLLVTRETIANNKKDAYQILGEPELAGHITTSGP 243 (439)
T ss_dssp EEEEECCTTTTTTTSSCCSEEEEEEEECSCTTSCCCTTSCGGGGEEEEEECHHHHHTSCGGGEEEEECCCBSSCTTCCCC
T ss_pred EeEEEeecCCCccccccCcEEEEEEEcCCcccCccccccCCCCceEEEEEECCCCcccCCCceEeCCcccccccCCCCce
Confidence 99999999997 99999999998 5 22 2345789999999998 8889999999999999999
Q ss_pred eEEEcceeeCCCCcccCCCchHH-HHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhhh-ccccCccCccchhHHHHHHHH
Q psy5138 371 SLHFDNVRVPEENIISGVGEGYK-IAAGFLNQGRIGIAAQMTGLAQGCLDATIPYTLE-RSQFGHRIFDFQSVQHQISQA 448 (575)
Q Consensus 371 ~l~f~~v~Vp~~~~l~~~~~~~~-~~~~~~~~~r~~~~a~~~G~~~~al~~~~~~~~~-r~~~g~~l~~~~~~~~~la~~ 448 (575)
++.||||+||++++||.++.|+. +....+...|+.+++.++|+++++++.+++|+++ |++||+||+++|.+|++|++|
T Consensus 244 ~v~fddv~VP~~~~lg~~~~g~~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~rr~~~G~~i~~~q~vq~~la~~ 323 (439)
T 2c12_A 244 HTRFTEFHVPHENLLCTPGLKAQGLVETAFAMSAALVGAMAIGTARAAFEEALVFAKSDTRGGSKHIIEHQSVADKLIDC 323 (439)
T ss_dssp EEEEEEEEEEGGGBCSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTSSSCGGGSHHHHHHHHHH
T ss_pred EEEEccEEecHHHcCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhceeeCCeehhccHHHHHHHHHH
Confidence 99999999999999999889998 8888899999999999999999999999999996 778999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCc----HHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcCCcchhhhhhhhccccccc
Q psy5138 449 ATQVECARLLTYNAARLLEAGQPF----IKQASMAKYFASEMAGHITRQCIDWMGGLGFTKDYPQEKFYRDCKMAGHITR 524 (575)
Q Consensus 449 ~~~~~aar~~~~~a~~~~~~~~~~----~~~~~~ak~~~~~~~~~~~~~~~~~~G~~~~~~~~p~~R~~RD~~~~~~~~~ 524 (575)
.++++++|++++++++.++.+.+. ...++++|+++++.+.++++.++|+
T Consensus 324 ~~~~~aar~~~~~aa~~~~~~~~~~~~~~~~~~~aK~~a~~~a~~v~~~a~q~--------------------------- 376 (439)
T 2c12_A 324 KIRLETSRLLVWKAVTTLEDEALEWKVKLEMAMQTKIYTTDVAVECVIDAMKA--------------------------- 376 (439)
T ss_dssp HHHHHHHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------------------------
T ss_pred HHHHHHHHHHHHHHHHHHhCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHh---------------------------
Confidence 999999999999999999887552 3358899999999999999999999
Q ss_pred ccccccccccccCCChHHHHhhhhccceeccchH-HHHHHHHHHHHH
Q psy5138 525 QCIDWMGGLGFTKDYPQEKYYRDCKVGTIYEGTS-NIQLSTIAKYIA 570 (575)
Q Consensus 525 ~~~~~~Gg~g~~~~~~~~~~~rd~~~~~~~~G~~-~~~~~~i~~~~~ 570 (575)
|||.||+.+++++++|||++...+++|++ ++++..|++.+.
T Consensus 377 -----~Gg~g~~~~~~l~r~~Rda~~~~i~~G~~~~~~~~~i~~~l~ 418 (439)
T 2c12_A 377 -----VGMKSYAKDMSFPRLLNEVMCYPLFDGGNIGLRRRQMQRVMA 418 (439)
T ss_dssp -----HCGGGGBTTSSHHHHHHHHTTTTTSSSCTTTTHHHHHHHHHT
T ss_pred -----cCceEEcCCChHHHHHHhhhcceeecCChHHHHHHHHHHHHh
Confidence 99999999999999999999999999988 799999988653
No 29
>2uxw_A VERY-long-chain specific acyl-COA dehydrogenase; fatty acid metabolism, transit peptide, disease mutation, LI metabolism, coenzyme A dehydrogenase; HET: FAD TH3; 1.45A {Homo sapiens} PDB: 3b96_A*
Probab=100.00 E-value=6e-49 Score=424.05 Aligned_cols=310 Identities=38% Similarity=0.649 Sum_probs=286.8
Q ss_pred HHHHHHHHHHhhhHHHhchhcCCccHHHHHHHHHhCC-------------------------------------------
Q psy5138 226 ASVAKLAKETIAPYVQKMESEEKIDETVLKTLFESGL------------------------------------------- 262 (575)
Q Consensus 226 ~~a~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~G~------------------------------------------- 262 (575)
..+++|+.+.+.+ .+.|+...+|+++|+.|.+.||
T Consensus 59 ~~~~~~~~~~~~~--~~~d~~~~~p~~~~~~l~e~Gl~~l~~P~e~GG~gl~~~~~~~v~e~l~~~~~s~a~~~~~~~~~ 136 (607)
T 2uxw_A 59 EPVSRFFEEVNDP--AKNDALEMVEETTWQGLKELGAFGLQVPSELGGVGLCNTQYARLVEIVGMHDLGVGITLGAHQSI 136 (607)
T ss_dssp HHHHHHHHHTCCH--HHHHHHTSCCHHHHHHHHHTTTTCTTSCGGGTSCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHTT
T ss_pred HHHHHHHHhhcCH--HHhccccCCCHHHHHHHHHcCCcCCCCChhhCCCCCCHHHHHHHHHHHHHcccHHHHHHHHHHHH
Confidence 7788888887654 3456778899999999999997
Q ss_pred --------CCHHHHHhcccc-cCCCceeEEeecCCCCCCccccceeEEEEe--CCEEEEeeeeccccCCccccEEEEEEE
Q psy5138 263 --------GTTEQKEKYLPR-LAQTDAGSFALSEPGSGSDAFAMKTTATKD--GNHYILNGSKMWISNADIANIFLVMAN 331 (575)
Q Consensus 263 --------g~~~~~~~~l~~-~~~~~~~~~~~te~~~gs~~~~~~~~a~~~--~~g~~l~G~k~~~s~~~~a~~~~v~a~ 331 (575)
|+++|+++|||+ ++|+.++|+++|||.+|||+..+.|+|+++ +++|+|||+|.|+|++..||+++|+++
T Consensus 137 g~~~l~~~Gt~eqk~~~Lp~l~~G~~~~~~alTEp~aGSD~~~~~t~A~~~~dG~~y~LnG~K~~is~~~~Ad~~lV~Ar 216 (607)
T 2uxw_A 137 GFKGILLFGTKAQKEKYLPKLASGETVAAFCLTEPSSGSDAASIRTSAVPSPCGKYYTLNGSKLWISNGGLADIFTVFAK 216 (607)
T ss_dssp TTHHHHHHCCHHHHHHHHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEECTTSSEEEEEEEEEEEETTTTCSEEEEEEE
T ss_pred HHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEecCCCCCCCcccceeEEEEeCCCCEEEEEeEEEeecCCcccCEEEEEEE
Confidence 899999999999 899999999999999999999999999986 348999999999999999999999999
Q ss_pred eCCCC---C--CCceEEEEEeCCCCCeeecccCccCCCCCccceeEEEcceeeCCCCcccCCCchHHHHHHHHhhhHHHH
Q psy5138 332 VDVSK---G--YRGITCFIVERSMEGFSVGKKENKLGMKASGTCSLHFDNVRVPEENIISGVGEGYKIAAGFLNQGRIGI 406 (575)
Q Consensus 332 ~~~~~---~--~~~~~~~lv~~~~~gv~i~~~~~~~G~rg~~s~~l~f~~v~Vp~~~~l~~~~~~~~~~~~~~~~~r~~~ 406 (575)
+++.+ + ..++++|+||++.|||++.+.|+++|+++++++++.|+||+||.+++||.++.|+......++..|+.+
T Consensus 217 ~~~~~~~~g~~~~gis~flVp~~~~Gv~v~~~~~~~G~rg~~t~~v~fddv~VP~~~llG~~g~G~~~~~~~l~~~Rl~~ 296 (607)
T 2uxw_A 217 TPVTDPATGAVKEKITAFVVERGFGGITHGPPEKKMGIKASNTAEVFFDGVRVPSENVLGEVGSGFKVAMHILNNGRFGM 296 (607)
T ss_dssp EEEECTTTCCEEEEEEEEEEEGGGSSEEECCCCCCSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHHHHHHHHHH
T ss_pred ecCCCcccCCCCCceEEEEEeCCCCCeEEecCccccCCCCCCeeEEEeccEEecHHHhcCCCCchHHHHHHHHHHHHHHH
Confidence 86321 1 357899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccccCccCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC-cHHHHHHHHHHHHH
Q psy5138 407 AAQMTGLAQGCLDATIPYTLERSQFGHRIFDFQSVQHQISQAATQVECARLLTYNAARLLEAGQP-FIKQASMAKYFASE 485 (575)
Q Consensus 407 ~a~~~G~~~~al~~~~~~~~~r~~~g~~l~~~~~~~~~la~~~~~~~aar~~~~~a~~~~~~~~~-~~~~~~~ak~~~~~ 485 (575)
++.++|+++++++.+++|+++|++||+||+++|.+|++|++|.+.++++|++++.++..+|.+.+ .....+++|+++++
T Consensus 297 aa~~~G~a~~al~~a~~ya~~R~qfG~pi~~~~~vq~~La~~~~~~eaaral~~~aa~~~d~~~~~~~~~~~~aK~~~se 376 (607)
T 2uxw_A 297 AAALAGTMRGIIAKAVDHATNRTQFGEKIHNFGLIQEKLARMVMLQYVTESMAYMVSANMDQGATDFQIEAAISKIFGSE 376 (607)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccCCchhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999987643 46788999999999
Q ss_pred HHHHHHHHHHhhcCCCCCCcCCcchhhhhhhhcccccccccccccccccccCCChHHHHhhhhccceeccchHHHHHHHH
Q psy5138 486 MAGHITRQCIDWMGGLGFTKDYPQEKFYRDCKMAGHITRQCIDWMGGLGFTKDYPQEKYYRDCKVGTIYEGTSNIQLSTI 565 (575)
Q Consensus 486 ~~~~~~~~~~~~~G~~~~~~~~p~~R~~RD~~~~~~~~~~~~~~~Gg~g~~~~~~~~~~~rd~~~~~~~~G~~~~~~~~i 565 (575)
.+.++++.++|+ |||.||+.+++++++|||++...|++|++++++..|
T Consensus 377 ~a~~v~~~a~qv--------------------------------~GG~G~~~e~~l~r~~Rda~~~~i~eGt~~i~~~~i 424 (607)
T 2uxw_A 377 AAWKVTDECIQI--------------------------------MGGMGFMKEPGVERVLRDLRIFRIFEGTNDILRLFV 424 (607)
T ss_dssp HHHHHHHHHHHH--------------------------------HTHHHHSSTTSHHHHHHHHGGGGTSSSCHHHHHHHH
T ss_pred HHHHHHHHHHHH--------------------------------hCCccccCccHHHHHHHhcccceeeCChHHHHHHHH
Confidence 999999999999 999999999999999999999999999999999998
Q ss_pred HHHH
Q psy5138 566 AKYI 569 (575)
Q Consensus 566 ~~~~ 569 (575)
++..
T Consensus 425 a~~g 428 (607)
T 2uxw_A 425 ALQG 428 (607)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6543
No 30
>3mxl_A Nitrososynthase; flavin monooxygenase, acyl-COA dehydrogenas oxidoreductase; 3.15A {Micromonospora carbonacea}
Probab=100.00 E-value=4e-47 Score=393.84 Aligned_cols=314 Identities=20% Similarity=0.264 Sum_probs=280.6
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHhhhHHHhchhcCCccHHHHHHHHHhCC------------------------------
Q psy5138 213 QPFIKQASMAKYFASVAKLAKETIAPYVQKMESEEKIDETVLKTLFESGL------------------------------ 262 (575)
Q Consensus 213 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~G~------------------------------ 262 (575)
..+++++.+++ +.+++|+.+ +.+.+.+.|+++.+|+++|++|.+.||
T Consensus 7 ~~lt~e~~~~~--~~~r~~~~~-~~~~a~~~d~~~~~p~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~~~~eel~~~ 83 (395)
T 3mxl_A 7 APLTPAGRTVV--DLLAGVIPR-ISAEAADRDRTGTFPVEAFEQFAKLGLMGATVPAELGGLGLTRLYDVATALMRLAEA 83 (395)
T ss_dssp SCCSHHHHHHH--HHHTTTHHH-HHHHHHHHHHHTCCCHHHHHHHHHHTGGGCSSCTTTTSCCCCCHHHHHHHHHHHHTT
T ss_pred cCCCHHHHHHH--HHHHHHHHH-HhhchHHHhhhCCCCHHHHHHHHHCCCcCcCCChhhCCCCCcCHHHHHHHHHHHHhh
Confidence 45788888888 899999975 789999999999999999999999996
Q ss_pred ------------------------CCHHHH---Hhcccc-cCCCceeEEeecCCCCCCccccceeEEEEeCCEEEEeeee
Q psy5138 263 ------------------------GTTEQK---EKYLPR-LAQTDAGSFALSEPGSGSDAFAMKTTATKDGNHYILNGSK 314 (575)
Q Consensus 263 ------------------------g~~~~~---~~~l~~-~~~~~~~~~~~te~~~gs~~~~~~~~a~~~~~g~~l~G~k 314 (575)
|+++|| ++||++ ++|+.++++++|||++|+ ..+. ++++|||+|||+|
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~qk~~~~~~l~~~~~g~~~~~~a~tEp~~~~--~~~~---t~~~~g~~lnG~K 158 (395)
T 3mxl_A 84 DASTALAWHVQLSRGLTLTYEWQHGTPPVRAMAERLLRAMAEGEAAVCGALKDAPGVV--TELH---SDGAGGWLLSGRK 158 (395)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHTSCCEECCCSBCTTCC--CEEE---ECSSSCEEEEEEE
T ss_pred CcHHHHHHHHHHHHHHHHHHHhhcCCHHHHhHHHHHHHHHhcCCcEEEEEecCCCCCC--CceE---EecCCEEEEeeEE
Confidence 789999 999999 899999999999998653 2222 2378899999999
Q ss_pred ccccCCccccEEEEEEEeCCCCCCCceEEEEEeCCCCCeeecccCccCCCCCccceeEEEcceeeCCCCccc--CCCchH
Q psy5138 315 MWISNADIANIFLVMANVDVSKGYRGITCFIVERSMEGFSVGKKENKLGMKASGTCSLHFDNVRVPEENIIS--GVGEGY 392 (575)
Q Consensus 315 ~~~s~~~~a~~~~v~a~~~~~~~~~~~~~~lv~~~~~gv~i~~~~~~~G~rg~~s~~l~f~~v~Vp~~~~l~--~~~~~~ 392 (575)
.|+||+.+|||++|.++++++++..++++|+||++.|||++.+.|+++|+|+++++++.||||+||++++|+ ..+.++
T Consensus 159 ~~is~a~~Ad~~~v~a~~~~~~~~~g~~~flV~~~~pGv~v~~~~~~~G~r~~~~~~v~f~~v~Vp~~~~lg~~~~g~g~ 238 (395)
T 3mxl_A 159 VLVSMAPIATHFFVHAQRRDDDGSVFLAVPVVHRDAPGLTVLDNWDGLGMRASGTLEVVFDRCPVRADELLERGPVGARR 238 (395)
T ss_dssp EEETTGGGCSEECCCEEEECTTSCEEEECCCEETTCTTEEEECCCCBSSCTTSCCEEEEEEEEEECGGGCCEEEESSCCC
T ss_pred EEecCccccCEEEEEEEeCCCCCCCceEEEEEECCCCceEeCCCchhcCCCCCCcceEEEcceEcCHHHhcCCCCCCccH
Confidence 999999999999999999766556678999999999999999999999999999999999999999999998 666666
Q ss_pred HHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhhhccccCccCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHc----
Q psy5138 393 KIAAGFLNQGRIGIAAQMTGLAQGCLDATIPYTLERSQFGHRIFDFQSVQHQISQAATQVECARLLTYNAARLLEA---- 468 (575)
Q Consensus 393 ~~~~~~~~~~r~~~~a~~~G~~~~al~~~~~~~~~r~~~g~~l~~~~~~~~~la~~~~~~~aar~~~~~a~~~~~~---- 468 (575)
..........|+.+++.++|+++++++.+++|++. +|+.++|.+|++|++|.++++++|++++++++..+.
T Consensus 239 ~~~~~~~~~~r~~~aa~~~G~a~~al~~a~~~a~~-----r~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~~~ 313 (395)
T 3mxl_A 239 DAVLAGQTVSSITMLGIYAGIAQAARDIAVGFCAG-----RGGEPRAGARALVAGLDTRLYALRTTVGAALTNADAASVD 313 (395)
T ss_dssp TTHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHT-----TCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHcC-----CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccc
Confidence 55555556688999999999999999999999994 588999999999999999999999999999998875
Q ss_pred --CCCc------HHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcCCcchhhhhhhhcccccccccccccccccccCCCh
Q psy5138 469 --GQPF------IKQASMAKYFASEMAGHITRQCIDWMGGLGFTKDYPQEKFYRDCKMAGHITRQCIDWMGGLGFTKDYP 540 (575)
Q Consensus 469 --~~~~------~~~~~~ak~~~~~~~~~~~~~~~~~~G~~~~~~~~p~~R~~RD~~~~~~~~~~~~~~~Gg~g~~~~~~ 540 (575)
..+. ...+.++|+++++.+.++++.++|+ |||.||+.+++
T Consensus 314 ~~~~~~~~~~~~~~~~~~ak~~~~~~a~~~~~~a~q~--------------------------------~Gg~g~~~~~~ 361 (395)
T 3mxl_A 314 LSGDPDERGRRMMTPFQYAKMTVNELAPAVVDDCLSL--------------------------------VGGLAYTAGHP 361 (395)
T ss_dssp CCSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------------------------HCGGGGBTTSH
T ss_pred cccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHH--------------------------------hChHhccCCCc
Confidence 1111 2456789999999999999999999 99999999999
Q ss_pred HHHHhhhhccce-eccchHHHHHHHHHHHHHh
Q psy5138 541 QEKYYRDCKVGT-IYEGTSNIQLSTIAKYIAK 571 (575)
Q Consensus 541 ~~~~~rd~~~~~-~~~G~~~~~~~~i~~~~~~ 571 (575)
++++|||++... +++|++++++..|++.+|+
T Consensus 362 ~~r~~Rda~~~~~~~~g~~~~~~~~ia~~~Lg 393 (395)
T 3mxl_A 362 LSRLYRDVRAGGFMQPYSYVDAVDYLSGQALG 393 (395)
T ss_dssp HHHHHHHGGGGGGCSSCCHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHhccccCCCCHHHHHHHHHHHHhC
Confidence 999999999999 9999999999999999876
No 31
>2or0_A Hydroxylase; APC7385, rhodococcus SP. RHA1, structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; HET: MSE; 2.10A {Rhodococcus SP}
Probab=100.00 E-value=1.1e-46 Score=392.31 Aligned_cols=311 Identities=17% Similarity=0.201 Sum_probs=273.7
Q ss_pred CchHHHHHHHHHHHHHHHHHHHhhhHHHhchhcCCccHHHHHHHHHhCC-------------------------------
Q psy5138 214 PFIKQASMAKYFASVAKLAKETIAPYVQKMESEEKIDETVLKTLFESGL------------------------------- 262 (575)
Q Consensus 214 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~G~------------------------------- 262 (575)
.+++++..++ ..+++|+.+ +.+.+.+.|+.+.+|+++|++|.+.||
T Consensus 17 ~~~~~~~~l~--~~~r~~~~~-~~~~a~~~d~~~~~p~~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~eela~~~~ 93 (414)
T 2or0_A 17 LYFQGMGRVL--DRIEVVAEE-IRGQAVQSEADCRLTDAAAGLLRDSGAIRLLQPRLYGGYEVHPREFAETVMGVAALDG 93 (414)
T ss_dssp ------CHHH--HHHHHTHHH-HHHHHHHHHHHTSCCHHHHHHHHHHTGGGTTSCGGGTCCCCCHHHHHHHHHHHHHHCH
T ss_pred CCCccHHHHH--HHHHHHHHH-HHHhHHHHHhcCCCCHHHHHHHHHCCCchhcCchhhCCCCCCHHHHHHHHHHHHhhCh
Confidence 3566777777 889999986 888888899999999999999999997
Q ss_pred -------------------CCHHHHHhcccccCCCceeEEeecCCCCCCccccceeEEEEeCCEEEEeeeeccccCCccc
Q psy5138 263 -------------------GTTEQKEKYLPRLAQTDAGSFALSEPGSGSDAFAMKTTATKDGNHYILNGSKMWISNADIA 323 (575)
Q Consensus 263 -------------------g~~~~~~~~l~~~~~~~~~~~~~te~~~gs~~~~~~~~a~~~~~g~~l~G~k~~~s~~~~a 323 (575)
|+++|+++|++ .++.++++++| | .|+|++++|||+|||+|.|+||+.+|
T Consensus 94 ~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~--~g~~~~a~a~t-p---------~t~A~~~~~g~~lnG~K~~is~a~~A 161 (414)
T 2or0_A 94 ASGWVTGIVGVHPWELAFADPQVQEEIWGE--DNDTWMASPYA-P---------MGVATPVDGGYVLKGRWSFSSGTDHC 161 (414)
T ss_dssp HHHHHHHHHTTHHHHHTTSCHHHHHHHHSS--CTTCCEECCCS-C---------CEEEEEETTEEEEEEEEEEETTGGGC
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHcc--CCCeEEEeccC-C---------CceeEEECCeEEEEeeEeccCCCchh
Confidence 89999999998 58888888876 3 58999999999999999999999999
Q ss_pred cEEEEEEEeCCCCCCC---ceEEEEEeCCCCCeeec-ccCccCCCCCccceeEEEcceeeCCCCcccC--------CC--
Q psy5138 324 NIFLVMANVDVSKGYR---GITCFIVERSMEGFSVG-KKENKLGMKASGTCSLHFDNVRVPEENIISG--------VG-- 389 (575)
Q Consensus 324 ~~~~v~a~~~~~~~~~---~~~~~lv~~~~~gv~i~-~~~~~~G~rg~~s~~l~f~~v~Vp~~~~l~~--------~~-- 389 (575)
||++|.++++++++.. ++++|+||++ ||++. +.|+++|+++++++++.||||+||++++|+. ++
T Consensus 162 d~~~v~a~~~~~~g~~~~~g~~~flV~~~--gv~v~~~~~~~~G~r~~~~~~v~fd~v~VP~~~~lg~~~~~~g~~~g~~ 239 (414)
T 2or0_A 162 QWAFLGAMVGDGEGGIATPSSLHVILPRT--DYQIVEDTWDVIGLRGTGSKDLIVDGAFVPGYRTLNAAKVMDGRAQKEA 239 (414)
T ss_dssp SEEEEEEEECC-----CCCSEEEEEEEGG--GCEEETTCCCBSSCGGGCCEEEEEEEEEEEGGGEEEHHHHHHSHHHHHH
T ss_pred hEEEEEEEecCCCCCcccceeEEEEEEhh--hcEEecCCCccccCcccCCCcEEEccEEecHHHeeccccccccCCCccc
Confidence 9999999987433333 7899999998 99999 9999999999999999999999999999975 11
Q ss_pred --chHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhhhcccc-CccCccchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5138 390 --EGYKIAAGFLNQGRIGIAAQMTGLAQGCLDATIPYTLERSQF-GHRIFDFQSVQHQISQAATQVECARLLTYNAARLL 466 (575)
Q Consensus 390 --~~~~~~~~~~~~~r~~~~a~~~G~~~~al~~~~~~~~~r~~~-g~~l~~~~~~~~~la~~~~~~~aar~~~~~a~~~~ 466 (575)
.|+.+....+...|+.+++.++|+++++++.+++|+++|++| |+||+++|.+|++|++|.++++++|++++++++.+
T Consensus 240 ~~~g~~~~~~~~~~~r~~~aa~~lG~a~~al~~a~~ya~~R~~f~G~~i~~~q~vq~~la~~~~~~~aar~l~~~aa~~~ 319 (414)
T 2or0_A 240 GRPEPLFNMPYSCMFPLGITAAVIGITEGALACHIAVQKDRVAITGQKIKEDPYVLSAIGESAAEINASRVSLIETADRF 319 (414)
T ss_dssp TCSCSGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCBCTTSCBGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 234445556778899999999999999999999999999999 99999999999999999999999999999999999
Q ss_pred H----cCCCc----HHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcCCcchhhhhhhhcccccccccccccccccccCC
Q psy5138 467 E----AGQPF----IKQASMAKYFASEMAGHITRQCIDWMGGLGFTKDYPQEKFYRDCKMAGHITRQCIDWMGGLGFTKD 538 (575)
Q Consensus 467 ~----~~~~~----~~~~~~ak~~~~~~~~~~~~~~~~~~G~~~~~~~~p~~R~~RD~~~~~~~~~~~~~~~Gg~g~~~~ 538 (575)
+ .+.+. ...++++|+++++.+.++++.++|+ |||.||+.+
T Consensus 320 ~~~~~~g~~~~~~~~~~~~~aK~~a~e~a~~v~~~a~q~--------------------------------~Gg~g~~~~ 367 (414)
T 2or0_A 320 YDKVDAGKEITFEERAIGRRTQIAAAWRAVRAADEIFAR--------------------------------AGGGALHYK 367 (414)
T ss_dssp HHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTT--------------------------------SCGGGGBTT
T ss_pred HHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh--------------------------------hChHhhccC
Confidence 8 65442 3478899999999999999999999 999999999
Q ss_pred ChHHHHhhhhccceeccc-hHHHHHHHHHHHHHhhh
Q psy5138 539 YPQEKYYRDCKVGTIYEG-TSNIQLSTIAKYIAKEY 573 (575)
Q Consensus 539 ~~~~~~~rd~~~~~~~~G-~~~~~~~~i~~~~~~~~ 573 (575)
++++++|||++...+++| ++++++..|++.+++..
T Consensus 368 ~~l~r~~Rda~~~~~~~G~t~~~~~~~ia~~~lg~~ 403 (414)
T 2or0_A 368 TPMQRFWRDAHAGLAHAVHVPGPTNHASALTQLGGE 403 (414)
T ss_dssp SSHHHHHHHHHHHHTSGGGCCHHHHHHHHHHHTTCC
T ss_pred CchhHHHHHHHHHHcCCcccchHHHHHHHHHHhCCC
Confidence 999999999999999999 99999999999988653
No 32
>2jbr_A P-hydroxyphenylacetate hydroxylase C2 oxygenase C; flavoenzyme hydroxylase, oxidoreductase; 2.3A {Acinetobacter baumannii} PDB: 2jbs_A* 2jbt_A*
Probab=100.00 E-value=5.7e-46 Score=387.70 Aligned_cols=304 Identities=19% Similarity=0.180 Sum_probs=274.7
Q ss_pred HHHHHHHHHHHHHHHhhhHHHhchhcCCccHHHHHHHHHhCC--------------------------------------
Q psy5138 221 MAKYFASVAKLAKETIAPYVQKMESEEKIDETVLKTLFESGL-------------------------------------- 262 (575)
Q Consensus 221 ~~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~G~-------------------------------------- 262 (575)
.++ ..+++|+. .+.+.+.+.|+.+.+|+++|++|.+.||
T Consensus 39 ~l~--~~~r~~~~-~~~~~a~~~d~~~~~p~~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~eela~~~~~~~~~~~ 115 (422)
T 2jbr_A 39 SML--EKIQQILP-QIAKNAESAEQLRRVPDENIKLLKEIGLHRAFQPKVYGGLEMSLPDFANCIVTLAGACAGTAWAFS 115 (422)
T ss_dssp CHH--HHHHHHHH-HHHHTHHHHHHHTSCCHHHHHHHHHTTGGGSSSCGGGTCCCCCHHHHHHHHHHHHHHCHHHHHHHH
T ss_pred HHH--HHHHHHHH-HHHHhhHHHHHcCCCCHHHHHHHHHCCchhcCCchhcCCCCCCHHHHHHHHHHHHhhCcCHHHHHH
Confidence 455 77888887 5778888889999999999999999997
Q ss_pred ------------CCHHHHHhcccccCCCceeEEeecCCCCCCccccceeEEEEeCCEEEEeeeeccccCCccccEEEEEE
Q psy5138 263 ------------GTTEQKEKYLPRLAQTDAGSFALSEPGSGSDAFAMKTTATKDGNHYILNGSKMWISNADIANIFLVMA 330 (575)
Q Consensus 263 ------------g~~~~~~~~l~~~~~~~~~~~~~te~~~gs~~~~~~~~a~~~~~g~~l~G~k~~~s~~~~a~~~~v~a 330 (575)
|+++|+++|++. ++.+++++++ | .|+|++++|||+|||+|.|+||+.+|||++|.+
T Consensus 116 ~~~~~~~~l~~~g~~~q~~~~l~~--g~~~~a~a~t-p---------~t~A~~~~~g~~lnG~K~~is~a~~Ad~~~v~a 183 (422)
T 2jbr_A 116 LLCTHSHQIAMFSKQLQDEIWLKD--PDATASSSIA-P---------FGKVEEVEGGIILNGDYGWSSGCDHAEYAIVGF 183 (422)
T ss_dssp HHHHHHHHHTTSCHHHHHHHHTTC--TTCCEEEECS-C---------CSEEEEETTEEEEEEEEEEETTGGGCSEEEEEE
T ss_pred HHHHHHHHHHhCCHHHHHHHHccC--CCeEEEeecC-C---------CeeEEEeCCEEEEeeeEeeecCCccccEEEEEE
Confidence 899999999986 7888898876 3 578999999999999999999999999999999
Q ss_pred EeCCCCCCCceEEEEEeCCCCCeeecccCccCCCCCccceeEEEcceeeCCCCcccCC--------Cch-----HHHHHH
Q psy5138 331 NVDVSKGYRGITCFIVERSMEGFSVGKKENKLGMKASGTCSLHFDNVRVPEENIISGV--------GEG-----YKIAAG 397 (575)
Q Consensus 331 ~~~~~~~~~~~~~~lv~~~~~gv~i~~~~~~~G~rg~~s~~l~f~~v~Vp~~~~l~~~--------~~~-----~~~~~~ 397 (575)
+++++++..++++|+||++ ||++.+.|+++|+++++++++.||||+||++++|+.. +.| +.+...
T Consensus 184 ~~~~~~g~~g~~~flV~~~--gv~v~~~~~~~G~r~~~~~~v~fddv~VP~~~~lg~~~~~~g~~~g~g~~~~~~~~~~~ 261 (422)
T 2jbr_A 184 NRFDADGNKIYSFGVIPRS--DYEIVDNWYAQAIKSSGSKMLKLVNVFIPEYRISKAKDMMEGKSAGFGLYPDSKIFYTP 261 (422)
T ss_dssp EEECTTSCEEEEEEEEEGG--GCEEECCCCBSSSGGGCCEEEEEEEEEEEGGGEEEHHHHHHTCSTTTTSCTTCSSSSSC
T ss_pred EecCCCCCceeEEEEEEcC--ceEEeCCccccCcCCCCCCcEEEeeEEecHHHeecccccccCCCCcccccCCCcccccc
Confidence 9875444457899999998 9999999999999999999999999999999999764 444 445556
Q ss_pred HHhhhHHHHHHHHHHHHHHHHHHHHHHhhhcc--ccCccCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHH----cCCC
Q psy5138 398 FLNQGRIGIAAQMTGLAQGCLDATIPYTLERS--QFGHRIFDFQSVQHQISQAATQVECARLLTYNAARLLE----AGQP 471 (575)
Q Consensus 398 ~~~~~r~~~~a~~~G~~~~al~~~~~~~~~r~--~~g~~l~~~~~~~~~la~~~~~~~aar~~~~~a~~~~~----~~~~ 471 (575)
.+...|+.+++.++|+++++++.+++|+++|+ +||+|++++|.+|++|++|.++++++|++++++++.++ .+.+
T Consensus 262 ~~~~~r~~~aa~~lG~a~~al~~a~~ya~~R~~~~fG~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~~~g~~ 341 (422)
T 2jbr_A 262 YRPYFASGFSAVSLGIAERMIEAFKEKQRNRVRAYTGANVGLATPALMRIAESTHQVAAARALLEKTWEDHRIHGLNHQY 341 (422)
T ss_dssp HHHHHTTHHHHHHHHHHHHHHHHHHHHHTTCBCTTTCCBCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 77888999999999999999999999999998 99999999999999999999999999999999999998 5544
Q ss_pred c----HHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcCCcchhhhhhhhcccccccccccccccccccCCChHHHHhhh
Q psy5138 472 F----IKQASMAKYFASEMAGHITRQCIDWMGGLGFTKDYPQEKFYRDCKMAGHITRQCIDWMGGLGFTKDYPQEKYYRD 547 (575)
Q Consensus 472 ~----~~~~~~ak~~~~~~~~~~~~~~~~~~G~~~~~~~~p~~R~~RD~~~~~~~~~~~~~~~Gg~g~~~~~~~~~~~rd 547 (575)
. ...++++|+++++.+.++++.++|+ |||.||+.+++++++|||
T Consensus 342 ~~~~~~~~~~~aK~~a~e~a~~v~~~a~q~--------------------------------~Gg~g~~~~~~l~r~~Rd 389 (422)
T 2jbr_A 342 PNKETLAFWRTNQAYAVKMCIEAVDRLMAA--------------------------------AGATSFMDNSELQRLFRD 389 (422)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHTT--------------------------------SCGGGGBTTCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------------------------hCHHhhhcCCcHHHHHHH
Confidence 2 3578999999999999999999999 999999999999999999
Q ss_pred hccceeccchH-HHHHHHHHHHHHhhh
Q psy5138 548 CKVGTIYEGTS-NIQLSTIAKYIAKEY 573 (575)
Q Consensus 548 ~~~~~~~~G~~-~~~~~~i~~~~~~~~ 573 (575)
++...+++|++ ++++..|++.+++..
T Consensus 390 a~~~~~~~G~~~e~~~~~ia~~~lg~~ 416 (422)
T 2jbr_A 390 AHMTGAHAYTDYDVCAQILGRELMGME 416 (422)
T ss_dssp HHHHTSSTTTCHHHHHHHHHHHHTTCC
T ss_pred HHHHhcCCccchhHHHHHHHHHHhCCC
Confidence 99999999999 999999999998753
No 33
>2rfq_A 3-HSA hydroxylase, oxygenase; rhodococcus SP. RHA1, structural genomics protein structure initiative, midwest center for structural genomics, MCSG; HET: 1PS; 1.65A {Rhodococcus SP} PDB: 3aff_A 3afe_A
Probab=100.00 E-value=7.2e-46 Score=384.15 Aligned_cols=300 Identities=17% Similarity=0.206 Sum_probs=270.0
Q ss_pred HHHHHHHHHHhhhHHHhchhcCCccHHHHHHHHHhCC-------------------------------------------
Q psy5138 226 ASVAKLAKETIAPYVQKMESEEKIDETVLKTLFESGL------------------------------------------- 262 (575)
Q Consensus 226 ~~a~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~G~------------------------------------------- 262 (575)
+.+++|+.+ +.+.+.+.|+.+.+|+++|++|.+.||
T Consensus 14 ~~~~~~~~~-~~~~~~~~d~~~~~p~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eela~~~~~~~~~~~~~~~~ 92 (394)
T 2rfq_A 14 QRLDALLPT-LRERAQETEDLRRIPDDSMKALQETGFFRLLQPEQWGGYQADPVLFYSAVRKIASACGSTGWVSSIIGVH 92 (394)
T ss_dssp HHHHHHHHH-HHHTHHHHHHHTSCCHHHHHHHHHHTGGGTTSCGGGTCCCCCHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-HHHhHHHHHhcCCCCHHHHHHHHHCCCceecCchhhCCCCCCHHHHHHHHHHHHhhChhHHHHHHHHHHH
Confidence 778888874 778888899999999999999999997
Q ss_pred -------CCHHHHHhcccccCCCceeEEeecCCCCCCccccceeEEEEeCCEEEEeeeeccccCCccccEEEEEEEeCCC
Q psy5138 263 -------GTTEQKEKYLPRLAQTDAGSFALSEPGSGSDAFAMKTTATKDGNHYILNGSKMWISNADIANIFLVMANVDVS 335 (575)
Q Consensus 263 -------g~~~~~~~~l~~~~~~~~~~~~~te~~~gs~~~~~~~~a~~~~~g~~l~G~k~~~s~~~~a~~~~v~a~~~~~ 335 (575)
|+++|+++|++ .++.+++++++ | .|+|++++|||+|||+|.|+||+.+|||++|.++++++
T Consensus 93 ~~~l~~~g~~~q~~~~l~--~g~~~~~~a~t-p---------~t~A~~~~~g~~lnG~K~~is~a~~Ad~~~v~a~~~~~ 160 (394)
T 2rfq_A 93 NWHLALFSQQAQEDVWGN--DTDVRISSSYA-P---------MGAGQVVDGGYTVNGAWAWSSGCDHASWAVLGGPVIKD 160 (394)
T ss_dssp HHHHTTSCHHHHHHHHSS--CTTCCEEEECS-C---------SEEEEEETTEEEEEEEEEEETTGGGCSEEEEEEEEEET
T ss_pred HHHHHhCCHHHHHHHhCC--CCCeEEEeccC-C---------CceEEEeCCeEEEeeeEeccCCCcccceEEEeeeecCC
Confidence 89999999998 57888898886 3 57999999999999999999999999999999998422
Q ss_pred CCCCceEEEEEeCCCCCeeecccCccCCCCCccceeEEEcceeeCCCCcccC--------CC----chHHHHHHHHhhhH
Q psy5138 336 KGYRGITCFIVERSMEGFSVGKKENKLGMKASGTCSLHFDNVRVPEENIISG--------VG----EGYKIAAGFLNQGR 403 (575)
Q Consensus 336 ~~~~~~~~~lv~~~~~gv~i~~~~~~~G~rg~~s~~l~f~~v~Vp~~~~l~~--------~~----~~~~~~~~~~~~~r 403 (575)
+.++++++|+||++ ||++.+.|+++|+++++++++.||||+||++++|+. ++ .++.+....+...|
T Consensus 161 g~~~~~~~flV~~~--gv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~~~~g~~~g~~~~~g~~~~~~~~~~~r 238 (394)
T 2rfq_A 161 GRPVDFVSFLIPRE--DYRIDDVWNVVGLRGTGSNTVVVEDVFVPTHRVLSFKAMSNLTAPGLERNTAPVYKMPWGTIHP 238 (394)
T ss_dssp TEEEEEEEEEEEGG--GCEEECCCCBSSCGGGCCEEEEEEEEEEEGGGEEEHHHHHTTCCGGGTTCCCGGGGSCHHHHHH
T ss_pred CCCCceeEEEEEhh--hcEEeCCccccccccCCCCceEEcceEcChHHhcccccccccCCCCcccCCCccccccHHHHHH
Confidence 22347899999998 999999999999999999999999999999999975 22 23444555677889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcc---ccCccCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHH----cCCCc----
Q psy5138 404 IGIAAQMTGLAQGCLDATIPYTLERS---QFGHRIFDFQSVQHQISQAATQVECARLLTYNAARLLE----AGQPF---- 472 (575)
Q Consensus 404 ~~~~a~~~G~~~~al~~~~~~~~~r~---~~g~~l~~~~~~~~~la~~~~~~~aar~~~~~a~~~~~----~~~~~---- 472 (575)
+.+++.++|+++++++.+++|+++|+ +||+||+++|.+|++|++|.++++++|++++++++.++ .+.+.
T Consensus 239 ~~~aa~~~G~a~~al~~a~~ya~~R~~~~~fG~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~~~~~g~~~~~~~ 318 (394)
T 2rfq_A 239 TTISAPIVGMAYGAYDAHVEHQGKRVRAAFAGEKAKDDPFAKVRIAEASSDIDAAWRQLSGNVADEYALLVAGEEVPFEL 318 (394)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCcCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHH
Confidence 99999999999999999999999999 99999999999999999999999999999999999998 65542
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcCCcchhhhhhhhcccccccccccccccccccCCChHHHHhhhhccce
Q psy5138 473 IKQASMAKYFASEMAGHITRQCIDWMGGLGFTKDYPQEKFYRDCKMAGHITRQCIDWMGGLGFTKDYPQEKYYRDCKVGT 552 (575)
Q Consensus 473 ~~~~~~ak~~~~~~~~~~~~~~~~~~G~~~~~~~~p~~R~~RD~~~~~~~~~~~~~~~Gg~g~~~~~~~~~~~rd~~~~~ 552 (575)
...++++|+++++.+.++++.++|+ |||.||+.++++++++||++...
T Consensus 319 ~~~~~~aK~~a~~~a~~~~~~a~q~--------------------------------~Gg~g~~~~~~l~r~~Rda~~~~ 366 (394)
T 2rfq_A 319 RLRARRDQVRATGRAISSIDKLFES--------------------------------SGATALANGTPLQRFWRDAHAGR 366 (394)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH--------------------------------HGGGGGBTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH--------------------------------hChhhhhcCCcHHHHHHHHHHHH
Confidence 3468899999999999999999999 99999999999999999999999
Q ss_pred eccc-hHHHHHHHHHHHHHhh
Q psy5138 553 IYEG-TSNIQLSTIAKYIAKE 572 (575)
Q Consensus 553 ~~~G-~~~~~~~~i~~~~~~~ 572 (575)
+++| ++++++..|++.+++.
T Consensus 367 ~~~g~~~~~~~~~i~~~llg~ 387 (394)
T 2rfq_A 367 VHAANDPERAYVMYGTGEFGL 387 (394)
T ss_dssp TSGGGCHHHHHHHHHHHHTTC
T ss_pred cccccCchhHHHHHHHHHhCC
Confidence 9999 9999999999998864
No 34
>3m9v_A FAD-dependent oxidoreductase; KIJD3, fatty acyl-COA dehydrogenase family, kijanose, kijani FAD, flavoprotein; HET: TYD; 2.05A {Actinomadura kijaniata}
Probab=100.00 E-value=9.6e-46 Score=388.24 Aligned_cols=314 Identities=18% Similarity=0.277 Sum_probs=275.1
Q ss_pred CchHHHHHHHHHHHHHHHHHHHhhhHHHhchhcCCccHHHHHHHHHhCC-------------------------------
Q psy5138 214 PFIKQASMAKYFASVAKLAKETIAPYVQKMESEEKIDETVLKTLFESGL------------------------------- 262 (575)
Q Consensus 214 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~G~------------------------------- 262 (575)
.+++++.+++ +.+++|+. .+.+.+.+.|+++.+|+++|++|.+.||
T Consensus 19 ~lt~e~~~l~--~~~r~~~~-~~~~~a~~~d~~~~~~~~~~~~l~~~Gl~~l~~P~~~GG~gl~~~~~~~~v~eel~~~~ 95 (439)
T 3m9v_A 19 PVTPAGRVLL--DRLAAHLP-RIRSTAAEHDRDGTFPTDTFDALRKDGLMGATVPAELGGLGVDRLYDVAVALLAVARAD 95 (439)
T ss_dssp CSSHHHHHHH--HHHHTTHH-HHHHHHHHHHHHTCCCHHHHHHHHHTTGGGTTSCGGGTSCCCCCHHHHHHHHHHHHHHC
T ss_pred CCCHHHHHHH--HHHHHHHH-HHhhhHHHHHhcCCCCHHHHHHHHHCCCccCCCChhhCCCCCCCHHHHHHHHHHHHhhC
Confidence 3578888888 88999997 4788999999999999999999999997
Q ss_pred -----------------------CCHHH---HHhcccc-cCCCceeEEeecCCCCCCccccceeEEEEeCCEEEEeeeec
Q psy5138 263 -----------------------GTTEQ---KEKYLPR-LAQTDAGSFALSEPGSGSDAFAMKTTATKDGNHYILNGSKM 315 (575)
Q Consensus 263 -----------------------g~~~~---~~~~l~~-~~~~~~~~~~~te~~~gs~~~~~~~~a~~~~~g~~l~G~k~ 315 (575)
|+++| |++||++ ++|+.++|+++|||+++ ...+.+ .++|||+|||+|.
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~gt~~q~~~k~~~l~~l~~g~~~~~~a~tEp~~~--~~~~~t---~~~~g~vlnG~K~ 170 (439)
T 3m9v_A 96 ASTALALHMQLSRGLTLGYEWRHGDERARTLAERILRGMVAGDAVVCSGIKDHHTA--VTTLRP---DGAGGWLLSGRKT 170 (439)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHTCCCEEEECEECTTC--CCEEEE---CSSSCEEEEEEEE
T ss_pred hHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhCCCceEEEeecCCCCC--CCceee---ccCCEEEEEeEEE
Confidence 78888 8999999 89999999999999853 333332 3788999999999
Q ss_pred cccCCccccEEEEEEEeCCCCCCCceEEEEEeCCCCCeeecccCccCCCCCccceeEEEcceeeCCCCccc--CCCchHH
Q psy5138 316 WISNADIANIFLVMANVDVSKGYRGITCFIVERSMEGFSVGKKENKLGMKASGTCSLHFDNVRVPEENIIS--GVGEGYK 393 (575)
Q Consensus 316 ~~s~~~~a~~~~v~a~~~~~~~~~~~~~~lv~~~~~gv~i~~~~~~~G~rg~~s~~l~f~~v~Vp~~~~l~--~~~~~~~ 393 (575)
|+||+.+|||++|.++++++++..++++|+||++.|||++.+.|+++|+++++++++.||||+||++++|+ ..+.++.
T Consensus 171 ~~s~a~~Ad~~~v~art~~~~~~~g~~~flVp~~~pGv~i~~~~~~~G~~~~~~~~v~fddv~VP~~~~lg~~~~g~g~~ 250 (439)
T 3m9v_A 171 LVSMAPVGTHFVINARTDGTDGPPRLASPVVTRDTPGFTVLDNWDGLGMRASGTVDIVFDDCPIPADHVLMRDPVGARND 250 (439)
T ss_dssp EETTGGGCSEEEECEEECC--CCCCEEEEEEETTCTTEEECCCCCCSSCTTSCCEEEEEEEEEECGGGEEECCC--CCCG
T ss_pred eecCccccCEEEEEEEecCCCCCceeEEEEEECCCCCeEECCCcccCCcCCCCceeEEEeeeEcCHHHccCCCCCCchHH
Confidence 99999999999999999866556789999999999999999999999999999999999999999999998 6666654
Q ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhhhccccCccCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHc---C-
Q psy5138 394 IAAGFLNQGRIGIAAQMTGLAQGCLDATIPYTLERSQFGHRIFDFQSVQHQISQAATQVECARLLTYNAARLLEA---G- 469 (575)
Q Consensus 394 ~~~~~~~~~r~~~~a~~~G~~~~al~~~~~~~~~r~~~g~~l~~~~~~~~~la~~~~~~~aar~~~~~a~~~~~~---~- 469 (575)
........+|+.+++.++|+++++++.+++|++. +|+.++|.+|++|++|.++++++|++++++++..+. .
T Consensus 251 ~~~~~~~~~r~~~aa~~~G~a~~al~~a~~~a~~-----r~i~~~~~vq~~la~~~~~~~aar~l~~~aa~~~d~~~~~~ 325 (439)
T 3m9v_A 251 AVLAGQTVSSVSVLGVYVGVAQAAYDTAVAALER-----RPEPPQAAALTLVAEIDSRLYALRATAGSALTAADALSADL 325 (439)
T ss_dssp GGHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHT-----CSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHcC-----CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 4444455588999999999999999999999995 578999999999999999999999999999887764 1
Q ss_pred --------CCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcCCcchhhhhhhhcccccccccccccccccccCCChH
Q psy5138 470 --------QPFIKQASMAKYFASEMAGHITRQCIDWMGGLGFTKDYPQEKFYRDCKMAGHITRQCIDWMGGLGFTKDYPQ 541 (575)
Q Consensus 470 --------~~~~~~~~~ak~~~~~~~~~~~~~~~~~~G~~~~~~~~p~~R~~RD~~~~~~~~~~~~~~~Gg~g~~~~~~~ 541 (575)
......+.++|+++++.+.++++.++|+ |||.||+.++++
T Consensus 326 ~~~~~~~~~~~~~~~~~ak~~a~~~a~~v~~~a~q~--------------------------------~Gg~G~~~~~~l 373 (439)
T 3m9v_A 326 SGDMDERGRQMMRHFQCAKLAVNRLAPEIVSDCLSL--------------------------------VGGASYTAGHPL 373 (439)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------------------------HCGGGGSTTSHH
T ss_pred ccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH--------------------------------hCHHHhcCCChH
Confidence 1123356778999999999999999999 999999999999
Q ss_pred HHHhhhhccce-eccchHHHHHHHHHHHHHhh
Q psy5138 542 EKYYRDCKVGT-IYEGTSNIQLSTIAKYIAKE 572 (575)
Q Consensus 542 ~~~~rd~~~~~-~~~G~~~~~~~~i~~~~~~~ 572 (575)
+++|||++... +++|++++++..+++.+++.
T Consensus 374 ~r~~Rda~~~~~~~~gt~~~~~~~i~~~~lg~ 405 (439)
T 3m9v_A 374 ARLLRDVQAGRFMQPYAYVDAVDFLSAQALGI 405 (439)
T ss_dssp HHHHHHTTGGGTSSSCCHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhhhhhCCCchHHHHHHHHHHHhCC
Confidence 99999999999 99999999999999998765
No 35
>1w07_A Acyl-COA oxidase; oxidoreductase, peroxisomal beta-oxidation, FAD cofactor; HET: FAD; 2.0A {Arabidopsis thaliana} SCOP: a.29.3.2 a.29.3.2 e.6.1.2 PDB: 2fon_A*
Probab=100.00 E-value=5.3e-45 Score=397.40 Aligned_cols=280 Identities=23% Similarity=0.335 Sum_probs=256.1
Q ss_pred CCHHHHHhcccc-cCCCceeEEeecCCCCCCccccceeEEEEe--CCEEEEe-----eeeccccC-CccccEEEEEEEeC
Q psy5138 263 GTTEQKEKYLPR-LAQTDAGSFALSEPGSGSDAFAMKTTATKD--GNHYILN-----GSKMWISN-ADIANIFLVMANVD 333 (575)
Q Consensus 263 g~~~~~~~~l~~-~~~~~~~~~~~te~~~gs~~~~~~~~a~~~--~~g~~l~-----G~k~~~s~-~~~a~~~~v~a~~~ 333 (575)
|+++|+++||++ ++|+.++|+++|||++|||+.+++|+|+++ +|||+|| |+|.|+|| +.+|||++|+|+++
T Consensus 114 Gt~eqk~~~L~~i~~Ge~~~~~a~TEp~~GSd~~~l~TtA~~d~~~~g~vLntP~~~G~K~~is~~a~~Ad~~lV~Ar~~ 193 (659)
T 1w07_A 114 GTEEQQKKWLSLANKMQIIGCYAQTELGHGSNVQGLETTATLDPKTDEFVIHTPTQTASKWWPGGLGKVSTHAVVYARLI 193 (659)
T ss_dssp SCHHHHHHHHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEEETTTTEEEEECCSGGGSEECCTTTTTTCSEEEEEEEEE
T ss_pred CCHHHHHHHhhHHhcCCEEEEEEecCCCCCCCcccceeEEEEcCCCCEEEEcCCCCCeEEEeecCCCCCCCEEEEEEEEC
Confidence 899999999999 899999999999999999999999999998 6899999 99999999 89999999999987
Q ss_pred CCCCCCceEEEEEeC-C------CCCeeecccCccCC---CCCccceeEEEcceeeCCCCcccC------CCchH-----
Q psy5138 334 VSKGYRGITCFIVER-S------MEGFSVGKKENKLG---MKASGTCSLHFDNVRVPEENIISG------VGEGY----- 392 (575)
Q Consensus 334 ~~~~~~~~~~~lv~~-~------~~gv~i~~~~~~~G---~rg~~s~~l~f~~v~Vp~~~~l~~------~~~~~----- 392 (575)
.++++.++++|+||. + .|||++.+.|+++| +++++++.+.||||+||.+++|+. .+.++
T Consensus 194 ~~~~~~G~~~flVp~r~~~~~~~~pGV~v~~~~~~~G~~~~~g~~~~~v~fd~VrVP~~~lLg~~~~v~~~g~~~~~~~~ 273 (659)
T 1w07_A 194 TNGKDYGIHGFIVQLRSLEDHSPLPNITVGDIGTKMGNGAYNSMDNGFLMFDHVRIPRDQMLMRLSKVTREGEYVPSDVP 273 (659)
T ss_dssp ETTEEEEEEEEEEECBCTTTCCBCTTEEEEECCCBSSSSGGGGSCCEEEEESSEEEEGGGBCCSSEEECTTCCEEECSSC
T ss_pred CCCCCCCeEEEEEEccccCCCCCCCCeEEecCccCccccccCCCCceEEEeccEEECHHHhcCCcCccCCCCceecCCcc
Confidence 544445789999994 5 79999999999999 999999999999999999999985 45443
Q ss_pred -HHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhhhccccCc-------cCccchhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5138 393 -KIAAGFLNQGRIGIAAQMTGLAQGCLDATIPYTLERSQFGH-------RIFDFQSVQHQISQAATQVECARLLTYNAAR 464 (575)
Q Consensus 393 -~~~~~~~~~~r~~~~a~~~G~~~~al~~~~~~~~~r~~~g~-------~l~~~~~~~~~la~~~~~~~aar~~~~~a~~ 464 (575)
......+...|+.+++.++|+++++++.+++|++.|++||. |++++|.+|++|+++.+++++++.+++++++
T Consensus 274 ~~~~~~~l~~~R~~~aa~~~G~a~~al~~a~~ya~~R~qfg~~~~~~e~pi~~~q~vq~rLa~~~a~~~a~~~~~~~aa~ 353 (659)
T 1w07_A 274 KQLVYGTMVYVRQTIVADASNALSRAVCIATRYSAVRRQFGAHNGGIETQVIDYKTQQNRLFPLLASAYAFRFVGEWLKW 353 (659)
T ss_dssp GGGCTTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCBCSCC---CCCCBGGGSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCCCCCCcccchhccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 24456678899999999999999999999999999999998 8999999999999999999999999999988
Q ss_pred HHH-------cCCC-----cHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcCCcchhhhhhhhccccccccccccccc
Q psy5138 465 LLE-------AGQP-----FIKQASMAKYFASEMAGHITRQCIDWMGGLGFTKDYPQEKFYRDCKMAGHITRQCIDWMGG 532 (575)
Q Consensus 465 ~~~-------~~~~-----~~~~~~~ak~~~~~~~~~~~~~~~~~~G~~~~~~~~p~~R~~RD~~~~~~~~~~~~~~~Gg 532 (575)
.++ .+.+ ....++++|.++++.+.++++.|+++ |||
T Consensus 354 ~~~~~~~~~~~g~~~~~~~~~~~~a~aK~~at~~a~~~~~~a~q~--------------------------------~GG 401 (659)
T 1w07_A 354 LYTDVTERLAASDFATLPEAHACTAGLKSLTTTATADGIEECRKL--------------------------------CGG 401 (659)
T ss_dssp HHHHHHHHTTTTCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHT--------------------------------TGG
T ss_pred HHHHHHHhhhcCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH--------------------------------hcC
Confidence 763 3332 24578899999999999999999999 999
Q ss_pred ccccCCChHHHHhhhhccceeccchHHHHHHHHHHHHHhhhc
Q psy5138 533 LGFTKDYPQEKYYRDCKVGTIYEGTSNIQLSTIAKYIAKEYT 574 (575)
Q Consensus 533 ~g~~~~~~~~~~~rd~~~~~~~~G~~~~~~~~i~~~~~~~~~ 574 (575)
+||+.++++++++||++...+++|++++++.++++.+++.|.
T Consensus 402 ~G~~~~~~l~r~~rda~~~~~~eG~~~v~~~~iar~lL~~~~ 443 (659)
T 1w07_A 402 HGYLWCSGLPELFAVYVPACTYEGDNVVLQLQVARFLMKTVA 443 (659)
T ss_dssp GGGBGGGSHHHHHHHHGGGGTTTSCHHHHHHHHHHHHHHHHT
T ss_pred cccccccCHHHHHHhcceeEEEeCChHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999885
No 36
>3djl_A Protein AIDB; alpha helix, beta-barrel, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.70A {Escherichia coli} PDB: 3u33_A*
Probab=100.00 E-value=8.4e-44 Score=377.96 Aligned_cols=267 Identities=21% Similarity=0.370 Sum_probs=253.5
Q ss_pred HHHHHhcccc-cCCCc-------------eeEEeecCCCCCCccccceeEEEEe-CCEEEEeeeeccccCCccccEEEEE
Q psy5138 265 TEQKEKYLPR-LAQTD-------------AGSFALSEPGSGSDAFAMKTTATKD-GNHYILNGSKMWISNADIANIFLVM 329 (575)
Q Consensus 265 ~~~~~~~l~~-~~~~~-------------~~~~~~te~~~gs~~~~~~~~a~~~-~~g~~l~G~k~~~s~~~~a~~~~v~ 329 (575)
++|+++|+++ ++++. ++++++|||++|||+..++|+|+++ +|+|+|||+|+|+| +.+|||++|+
T Consensus 150 ~eqk~~~lp~l~sge~~p~~~~~~~~~g~~~~~a~TEp~~GSDl~~~~T~A~~~~~g~y~LnG~K~f~S-a~~Ad~~lVl 228 (541)
T 3djl_A 150 PAPFQDWTTPLLSDRYDSHLLPGGQKRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFS-VPQSDAHLVL 228 (541)
T ss_dssp CGGGGGGHHHHTCSCCCCCSSCGGGSSSCCEEEECCBTTBSSCGGGCCCEEEECTTSCEEEEEEEEEEE-CTTSSEEEEE
T ss_pred HHHHHHHHHHHhCCCcccccccccccccceeEEEeccCCcCCCcccceeEEEEcCCCeEEEEEEEEeec-ccccCEEEEE
Confidence 8999999999 88887 7899999999999999999999999 88999999999999 8999999999
Q ss_pred EEeCCCCCCCceEEEEEeCCCC-----CeeecccCccCCCCCccceeEEEcceeeCCCCcccCCCchHHHHHHHHhhhHH
Q psy5138 330 ANVDVSKGYRGITCFIVERSME-----GFSVGKKENKLGMKASGTCSLHFDNVRVPEENIISGVGEGYKIAAGFLNQGRI 404 (575)
Q Consensus 330 a~~~~~~~~~~~~~~lv~~~~~-----gv~i~~~~~~~G~rg~~s~~l~f~~v~Vp~~~~l~~~~~~~~~~~~~~~~~r~ 404 (575)
++++ .++++|+||++.| ||++.+.|+++|+|+++++++.|+||+ ++++|.++.|+.+....+...|+
T Consensus 229 Art~-----~Gis~flVp~~~p~~~~~Gv~i~~~~~~~G~rgt~s~~v~fddv~---~~llG~~g~G~~~~~~~l~~~Rl 300 (541)
T 3djl_A 229 AQTA-----GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAI---GWLLGLEGEGIRLILKMGGMTRF 300 (541)
T ss_dssp EEET-----TEEEEEEEESBCTTSCBCSEEEEEECCCSSCTTSCEEEEEEEEEE---EEEESSTTCHHHHTHHHHHHHHH
T ss_pred EEEC-----CceEEEEEecCCCCCCcCCeEEeeccccCCCcCCceeEEEEccce---eeeeecCCchHHHHHHHHHHHHH
Confidence 9985 4799999999998 999999999999999999999999995 89999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccccCccCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCc------HHHHHH
Q psy5138 405 GIAAQMTGLAQGCLDATIPYTLERSQFGHRIFDFQSVQHQISQAATQVECARLLTYNAARLLEAGQPF------IKQASM 478 (575)
Q Consensus 405 ~~~a~~~G~~~~al~~~~~~~~~r~~~g~~l~~~~~~~~~la~~~~~~~aar~~~~~a~~~~~~~~~~------~~~~~~ 478 (575)
.+++.++|+++++++.+++|+++|++||+|++++|.+|++|++|.+++++++++++++++.++.+.+. ....++
T Consensus 301 ~~aa~~~G~a~~al~~a~~ya~~R~~fG~~i~~~p~vq~~La~~~~~~eaaral~~~aa~~~d~~~~~~~~~~~~~~~~~ 380 (541)
T 3djl_A 301 DCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTALLFRLARAWDRRADAKEALWARLFTPA 380 (541)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCccCCCchhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCChhhHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999986542 345778
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCCcCCcchhhhhhhhcccccccccccccccccccCCChHHHHhhhhccceeccchH
Q psy5138 479 AKYFASEMAGHITRQCIDWMGGLGFTKDYPQEKFYRDCKMAGHITRQCIDWMGGLGFTKDYPQEKYYRDCKVGTIYEGTS 558 (575)
Q Consensus 479 ak~~~~~~~~~~~~~~~~~~G~~~~~~~~p~~R~~RD~~~~~~~~~~~~~~~Gg~g~~~~~~~~~~~rd~~~~~~~~G~~ 558 (575)
+|+++++.+.++++.++++ +||.||..+++++++|||++...|++|++
T Consensus 381 aK~~ase~a~~~~~~a~q~--------------------------------~Gg~G~~~e~~l~r~~Rda~~~~i~eGt~ 428 (541)
T 3djl_A 381 AKFVICKRGMPFVAEAMEV--------------------------------LGGIGYCEESELPRLYREMPVNSIWEGSG 428 (541)
T ss_dssp HHHHHHHHHHHHHHHHHHH--------------------------------HGGGGGSTTSHHHHHHHHHHHHHHGGGHH
T ss_pred HHHHHHHHHHHHHHHHHHh--------------------------------hCCeeecCCCcHHHHHHhhhhhheeCCcH
Confidence 9999999999999999999 99999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhh
Q psy5138 559 NIQLSTIAKYIAKE 572 (575)
Q Consensus 559 ~~~~~~i~~~~~~~ 572 (575)
+||+..|+|.+++.
T Consensus 429 ei~~~~i~r~l~~~ 442 (541)
T 3djl_A 429 NIMCLDVLRVLNKQ 442 (541)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhC
Confidence 99999999998765
No 37
>2ddh_A Acyl-COA oxidase; beta barrel, alpha UP-DOWN bundle, oxidoreductase; HET: FAD HXD; 2.07A {Rattus norvegicus} SCOP: a.29.3.2 a.29.3.2 e.6.1.2 PDB: 1is2_A*
Probab=100.00 E-value=8e-44 Score=387.32 Aligned_cols=281 Identities=23% Similarity=0.331 Sum_probs=252.7
Q ss_pred CCCHHHHHhcccc-cCCCceeEEeecCCCCCCccccceeEEEEe--CCEEEEe-----eeeccccC-CccccEEEEEEEe
Q psy5138 262 LGTTEQKEKYLPR-LAQTDAGSFALSEPGSGSDAFAMKTTATKD--GNHYILN-----GSKMWISN-ADIANIFLVMANV 332 (575)
Q Consensus 262 ~g~~~~~~~~l~~-~~~~~~~~~~~te~~~gs~~~~~~~~a~~~--~~g~~l~-----G~k~~~s~-~~~a~~~~v~a~~ 332 (575)
+|+++|+++||++ ++|+.++|+++|||++|||+.+++|+|+++ ++||+|| |+|+|+|| +.+|||++|+|++
T Consensus 114 ~Gt~eq~~~~L~~i~~Ge~~g~~a~TE~g~GSd~~~l~TtA~~d~~~~~~vLntP~~~G~K~wis~~a~~Ad~~vV~Ar~ 193 (661)
T 2ddh_A 114 QATAEQQERFFMPAWNLEITGTYAQTEMGHGTHLRGLETTATYDPKTQEFILNSPTVTSIKWWPGGLGKTSNHAIVLAQL 193 (661)
T ss_dssp CCCHHHHHHHHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEEETTTTEEEEECCSSTTSEECCTTTTTTCSEEEEEEEE
T ss_pred hCCHHHHHHHHHHHhCCCeeEEEeeccCCcCcCcccceeEEEEcCCCCeEEEcCCCCCeEEEecCCCcccCCEEEEEEEE
Confidence 4899999999999 899999999999999999999999999998 7899999 99999999 7899999999998
Q ss_pred CCCCCCCceEEEEEe-CC------CCCeeecccCccCCCCCccceeEEEcceeeCCCCcccCC------Cch-----HHH
Q psy5138 333 DVSKGYRGITCFIVE-RS------MEGFSVGKKENKLGMKASGTCSLHFDNVRVPEENIISGV------GEG-----YKI 394 (575)
Q Consensus 333 ~~~~~~~~~~~~lv~-~~------~~gv~i~~~~~~~G~rg~~s~~l~f~~v~Vp~~~~l~~~------~~~-----~~~ 394 (575)
..++++.++++|+|| ++ .|||++.+.|+++|+++++++.+.||||+||++++|+.. +.+ +..
T Consensus 194 ~~~~~~~G~~~FlVp~rd~~~~~~~pGV~v~~~~~k~Gl~g~~~~~v~Fd~VrVP~~~lLg~~~~v~~~G~~~~~~~~~~ 273 (661)
T 2ddh_A 194 ITQGECYGLHAFVVPIREIGTHKPLPGITVGDIGPKFGYEEMDNGYLKMDNYRIPRENMLMKYAQVKPDGTYVKPLSNKL 273 (661)
T ss_dssp EETTEEEEEEEEEEECBCTTTCCBCTTEEEEECCCCSSCTTCCCEEEEESSEEEEGGGBCCSSCEECTTCCEECCC----
T ss_pred ccCCCCCceEEEEEecccccCCCCCCCeEEecCcccccCCCCcceEEEeccEEECHHHhcCcccccCCCCceeccchHHH
Confidence 754445689999999 44 799999999999999999999999999999999999874 322 566
Q ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhhhccccCc-------cCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5138 395 AAGFLNQGRIGIAAQMTGLAQGCLDATIPYTLERSQFGH-------RIFDFQSVQHQISQAATQVECARLLTYNAARLLE 467 (575)
Q Consensus 395 ~~~~~~~~r~~~~a~~~G~~~~al~~~~~~~~~r~~~g~-------~l~~~~~~~~~la~~~~~~~aar~~~~~a~~~~~ 467 (575)
....+..+|+.+++.++|+++++++.+++|++.|++||. ||.++|.+|++|+++.+++++++.+++++++.++
T Consensus 274 ~~~~l~~~R~~iaa~~~G~a~~al~~a~~ya~~R~qfg~~~~~~e~~i~~~q~vq~rLa~~~a~~~aar~~~~~aa~~~~ 353 (661)
T 2ddh_A 274 TYGTMVFVRSFLVGNAAQSLSKACTIAIRYSAVRRQSEIKQSEPEPQILDFQTQQYKLFPLLATAYAFHFVGRYMKETYL 353 (661)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCBCSCSSTTSCCCBGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcccCCCCCCccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 677788899999999999999999999999999999998 8999999999999999999999999999999886
Q ss_pred c-------CCC-----cHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcCCcchhhhhhhhcccccccccccccccccc
Q psy5138 468 A-------GQP-----FIKQASMAKYFASEMAGHITRQCIDWMGGLGFTKDYPQEKFYRDCKMAGHITRQCIDWMGGLGF 535 (575)
Q Consensus 468 ~-------~~~-----~~~~~~~ak~~~~~~~~~~~~~~~~~~G~~~~~~~~p~~R~~RD~~~~~~~~~~~~~~~Gg~g~ 535 (575)
. +.+ ....++++|.++++.+.++++.|+++ |||+||
T Consensus 354 ~~~~~~~~g~~~~~~~~~~~aa~aK~~at~~a~~~~~~a~q~--------------------------------~GG~G~ 401 (661)
T 2ddh_A 354 RINESIGQGDLSELPELHALTAGLKAFTTWTANAGIEECRMA--------------------------------CGGHGY 401 (661)
T ss_dssp C----------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------------------------TTHHHH
T ss_pred HHHHHhhcCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH--------------------------------hCcccc
Confidence 3 322 24568899999999999999999999 999999
Q ss_pred cCCChHHHHhhhhccceeccchHHHHHHHHHHHHHhhhc
Q psy5138 536 TKDYPQEKYYRDCKVGTIYEGTSNIQLSTIAKYIAKEYT 574 (575)
Q Consensus 536 ~~~~~~~~~~rd~~~~~~~~G~~~~~~~~i~~~~~~~~~ 574 (575)
+.++++++++||++...+++|++++++.++++.+++.|.
T Consensus 402 ~~~~~l~r~~rda~~~~~~eG~~~vl~~~iar~lL~~~~ 440 (661)
T 2ddh_A 402 SHSSGIPNIYVTFTPACTFEGENTVMMLQTARFLMKIYD 440 (661)
T ss_dssp SGGGSHHHHHHHHGGGGTSSSCHHHHHHHHHHHHHHHHH
T ss_pred cccCcHHHHHHhcceeeEecCchHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999998874
No 38
>3owa_A Acyl-COA dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-structure, beta-barrel; HET: MSE FAD 1PE; 1.97A {Bacillus anthracis}
Probab=100.00 E-value=1.9e-37 Score=333.29 Aligned_cols=396 Identities=24% Similarity=0.374 Sum_probs=281.5
Q ss_pred CHHHHHHhhhHhhcCC-ceeEEecCCCCCCCcCCCeeEEEEe--CCEEEEeeEEeeeeCCCCCcEEEEEEEecCCCCccc
Q psy5138 2 TTEQKEKYLPRLAQTD-AGSFALSEPGSGSDAFAMKTTATKD--GNHYILNGSKMWISNADIANIFLVMANVDVSKGYRG 78 (575)
Q Consensus 2 ~~~qk~~~l~~~~~g~-~~~~a~se~~~g~~~~~~~~~a~~~--~~g~~l~G~k~~~t~~~~ad~~~v~a~~~~~~~~~~ 78 (575)
|++||++|||++++|+ ++++++|||++|+|+..++|+|+++ +++|+|||+|.|+||+..||+++|+|++++ ++
T Consensus 131 t~eQk~~~Lp~la~Ge~~~a~alTEp~aGSD~~~~~T~A~~~~dG~~yvLnG~K~~is~a~~Ad~~lV~Art~~----~g 206 (597)
T 3owa_A 131 NEEQKKKYLPLLATGEKLAAYALTEPGSGSDALGAKTTARLNAEGTHYVLNGEKQWITNSAFADVFIVYAKIDG----EH 206 (597)
T ss_dssp CHHHHHHHHHHHHHTSSCEEEECCBTTBSSSGGGCCCEEEECTTSSEEEEEEEEEEEETTTTCSEEEEEEEETT----TE
T ss_pred CHHHHHHHHHHHhCCCcceeeEecCCCCCCCcccceeEEEEeCCCCEEEEeeEEEEeCCCccCCEEEEEEEeCC----Cc
Confidence 6899999999999999 6999999999999999999999984 567999999999999999999999999863 36
Q ss_pred eeEEEEecCCCCeEEcccCcccCCCCCCceeEEeeeeEeCCCCcccCCCCcHHHHHHhhhHHHHHHHHHHHHHHHHHHHH
Q psy5138 79 ITCFIVERSMEGFSVGKKENKLGMKASGTCSLHFDNVRVPEENIISGVGEGYKIAAGFLNQGRIGIAAQMTGLAQGCLDA 158 (575)
Q Consensus 79 ~~~~~vp~~~~Gv~~~~~~~~~g~~~~~~~~v~f~~v~Vp~~~~l~~~~~g~~~~~~~~~~~~~~~~a~~~G~~~~a~~~ 158 (575)
+++|+||.+.|||++.+.|+++|++++++++|.|+||+||.+++||..+.|+......++.+|+.+++.++|+++++++.
T Consensus 207 ~s~flV~~~~pGv~v~~~~~~~Glrgs~t~~v~fddV~VP~~~lLG~~g~G~~~~~~~l~~~R~~~aa~~lG~a~~al~~ 286 (597)
T 3owa_A 207 FSAFIVEKDYAGVSTSPEEKKMGIKCSSTRTLILEDALVPKENLLGEIGKGHIIAFNILNIGRYKLGVGTVGSAKRAVEI 286 (597)
T ss_dssp EEEEEEETTSTTEEECCCCCBSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEeCCCCCeEEecccccccCCCCCceEEEEeceeecHHHhcCcccchHHHHHHhhHhHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhcccCccccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCc-------------------hHHH
Q psy5138 159 TIPYTLERSQVGHRIFDFQACNGGSVQHQISQAVTQVECARLLTYNAARLLEAGQPF-------------------IKQA 219 (575)
Q Consensus 159 a~~~a~~r~~~g~~~~~~q~~~~~~vq~~la~~~~~~~~~~~~~~~a~~~~~~~~~~-------------------~~~~ 219 (575)
+++|+++|+|||+|+++||. +|+++++|.+.++++|++++++++.++.+... ..+.
T Consensus 287 a~~ya~~R~qfG~pi~~~q~-----vq~~LA~m~~~~~aar~l~~~aa~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (597)
T 3owa_A 287 SAQYANQRQQFKQPIARFPL-----IQEKLANMAAKTYAAESSVYRTVGLFESRMSTLSEEEVKDGKAVAASIAEYAIEC 361 (597)
T ss_dssp HHHHHHHCEETTEEGGGSHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHCHHHHHHHHTTHHHH
T ss_pred HHHHHHhCeeCCccccccHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccchhhhhhhhhHHHHHHH
Confidence 99999999999999999998 99999999999999999999999988764211 1111
Q ss_pred HHHHHHHHHHHHHHHHhhhHHHhchhcCCccHHHHHHHHHhCCCCHHHHHhcccccCCCceeEEeecCCCCCCcccccee
Q psy5138 220 SMAKYFASVAKLAKETIAPYVQKMESEEKIDETVLKTLFESGLGTTEQKEKYLPRLAQTDAGSFALSEPGSGSDAFAMKT 299 (575)
Q Consensus 220 ~~~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~G~g~~~~~~~~l~~~~~~~~~~~~~te~~~gs~~~~~~~ 299 (575)
++.| -++.+... ..-.+.++-++..|+-.+...++|+.++....+ ..|++-.....
T Consensus 362 s~aK------~~ase~a~----------~v~~~a~qi~GG~G~~~e~~ler~~RDar~~~i--------~eGt~ei~r~~ 417 (597)
T 3owa_A 362 SLNK------VFGSEVLD----------YTVDEGVQIHGGYGFMAEYEIERMYRDSRINRI--------FEGTNEINRLI 417 (597)
T ss_dssp HHHH------HHHHHHHH----------HHHHHHHHHHGGGGGBTTSHHHHHHHHHGGGGT--------SSSCHHHHHHH
T ss_pred HHHH------HHHHHHHH----------HHHHHHHHhhCCccccccChHHHHHHHhhhhhe--------eCcHHHHHHHH
Confidence 2222 12222111 122455666666666333334444443111110 01111000000
Q ss_pred EEEEeCCEEEEeeeeccccCCccccEEEEEEEeCCCCCCCceEEEEEeCCCCCeeecccCccCCCCCccceeEEEcceee
Q psy5138 300 TATKDGNHYILNGSKMWISNADIANIFLVMANVDVSKGYRGITCFIVERSMEGFSVGKKENKLGMKASGTCSLHFDNVRV 379 (575)
Q Consensus 300 ~a~~~~~g~~l~G~k~~~s~~~~a~~~~v~a~~~~~~~~~~~~~~lv~~~~~gv~i~~~~~~~G~rg~~s~~l~f~~v~V 379 (575)
.+. ..| |.+.- +...+ +-+ .-.+... + + . +.
T Consensus 418 Ia~-----~ll---~~~~k------------------~~~~~---~~~----~~~~~~~---~-~-----------~-~~ 448 (597)
T 3owa_A 418 VPG-----TFL---RKAMK------------------GELPL---LQK----AQKLQEE---L-M-----------M-MM 448 (597)
T ss_dssp HHH-----HHH---HHHHT------------------TSSCH---HHH----HHHHHHH---H-T-----------T-C-
T ss_pred HHH-----HHH---HHHhc------------------CCcch---hHH----HHHHHHH---H-h-----------h-cC
Confidence 000 000 00000 00000 000 0000000 0 0 0 01
Q ss_pred CCCCcccCCCchHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhhhccccCccCccchhHHHHHHHHHHHHHHHHHHH
Q psy5138 380 PEENIISGVGEGYKIAAGFLNQGRIGIAAQMTGLAQGCLDATIPYTLERSQFGHRIFDFQSVQHQISQAATQVECARLLT 459 (575)
Q Consensus 380 p~~~~l~~~~~~~~~~~~~~~~~r~~~~a~~~G~~~~al~~~~~~~~~r~~~g~~l~~~~~~~~~la~~~~~~~aar~~~ 459 (575)
|... .... +.....++..+...+..+..++.+| +|+.+.+.|.+..+|+++.++++++.+.+
T Consensus 449 ~~~~----~~~~------------l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~q~~l~~~ad~~~~~y~~~~~~ 510 (597)
T 3owa_A 449 PEEV----GDEP------------LALQKYLVNNAKKIGLMVAGLAAQK--YGKALDKEQEILVNIADIVSNLYAMESAV 510 (597)
T ss_dssp --CC----CSST------------THHHHHHHHHHHHHHHHHHHHHHHH--HGGGGGGCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcc----cccc------------HHHHHHHHHHHHHHHHHHHHHHHHH--hCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1100 0000 1111222333444444455555544 45678899999999999999999999999
Q ss_pred HHHHHHHHc-CCC-cHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy5138 460 YNAARLLEA-GQP-FIKQASMAKYFASEMAGHITRQCIDW 497 (575)
Q Consensus 460 ~~a~~~~~~-~~~-~~~~~~~ak~~~~~~~~~~~~~~~~~ 497 (575)
.++...+.. +.+ ...+..+++.|+.+...++-..+.++
T Consensus 511 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 550 (597)
T 3owa_A 511 LRTEKAIKTTGLEKNKQKVLYTEVFCQEAFNEIEAHAKET 550 (597)
T ss_dssp HHHHHHHHHHCSGGGHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999998875 654 36789999999999999999988888
No 39
>1ukw_A Acyl-COA dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: FAD; 2.40A {Thermus thermophilus} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=1.3e-37 Score=320.01 Aligned_cols=228 Identities=43% Similarity=0.667 Sum_probs=207.6
Q ss_pred CHHHHHHhhhHhhcCC-ceeEEecCCCCCCCcCCCeeEEEEeCCEEEEeeEEeeeeCCCCCcEEEEEEEecCCCCcccee
Q psy5138 2 TTEQKEKYLPRLAQTD-AGSFALSEPGSGSDAFAMKTTATKDGNHYILNGSKMWISNADIANIFLVMANVDVSKGYRGIT 80 (575)
Q Consensus 2 ~~~qk~~~l~~~~~g~-~~~~a~se~~~g~~~~~~~~~a~~~~~g~~l~G~k~~~t~~~~ad~~~v~a~~~~~~~~~~~~ 80 (575)
|++||++|||++++|+ ++++++|||++|+|...+++++++++|||+|||+|.|+||+..||+++|++++++++++.+++
T Consensus 102 ~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~~~~~~~~~g~~ 181 (379)
T 1ukw_A 102 TEEQKERFLRPLTEKPALAAFALSEPGNGSDAAALKTRAIRQGDHYVLNGTKMWISNGGEAEWVVVFATVNPELRHKGVV 181 (379)
T ss_dssp CHHHHHHHHGGGTSSSCEEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEEETTTTEEEEEEEEESCGGGGGGGEE
T ss_pred CHHHHHHHHHHHhCCCceEEEEecCCCCCcChhhCeEEEEEeCCEEEEEEEEecccCCCcCCEEEEEEEcCCCCCCCceE
Confidence 6899999999999999 699999999999999999999999999999999999999999999999999986443445789
Q ss_pred EEEEecCCCCeEEcccCcccCCCCCCceeEEeeeeEeCCCCcccCCCCcHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHH
Q psy5138 81 CFIVERSMEGFSVGKKENKLGMKASGTCSLHFDNVRVPEENIISGVGEGYKIAAGFLNQGRIGIAAQMTGLAQGCLDATI 160 (575)
Q Consensus 81 ~~~vp~~~~Gv~~~~~~~~~g~~~~~~~~v~f~~v~Vp~~~~l~~~~~g~~~~~~~~~~~~~~~~a~~~G~~~~a~~~a~ 160 (575)
+|+||.+.|||++.+.|+++|++++++++|.||||+||++++++.++.|+......+...|+.+++.++|+++++++.++
T Consensus 182 ~flV~~~~~Gv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~~~ 261 (379)
T 1ukw_A 182 ALVVERGTPGFKAIKIHGKMGQRASGTYELVFEDVKVPVENRLGEEGEGFKIAMQTLNKTRIPVAAGSVGVARRALDEAR 261 (379)
T ss_dssp EEEEETTCTTEEEEECCCCSSCTTSCEEEEEEEEEEEEGGGEESCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCCeEecCccccccCCCCCeeEEEEeeEEecHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999988999888888899999999999999999999999
Q ss_pred HHhhhhcccCccccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHh
Q psy5138 161 PYTLERSQVGHRIFDFQACNGGSVQHQISQAVTQVECARLLTYNAARLLEAGQPFIKQASMAKYFASVAKLAKETI 236 (575)
Q Consensus 161 ~~a~~r~~~g~~~~~~q~~~~~~vq~~la~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 236 (575)
+|+++|++||+|+.+||. +|+++++|.+.++++|++++++++.++.+.+...+.++.| ..+.+.+.+..
T Consensus 262 ~ya~~R~~fg~~i~~~q~-----vq~~la~~~~~~~aar~~~~~aa~~~d~g~~~~~~~~~aK--~~a~~~a~~~~ 330 (379)
T 1ukw_A 262 KYAKEREAFGEPIANFQA-----IQFKLVDMLIGIETARMYTYYAAWLADQGLPHAHASAIAK--AYASEIAFEAA 330 (379)
T ss_dssp HHHHHCBSSSSBGGGSHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHH--HHHHHHHHHHH
T ss_pred HHHHhCeeCCcchhhhHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHH--HHHHHHHHHHH
Confidence 999999999999999998 9999999999999999999999999988766666666666 33444444443
No 40
>2d29_A Acyl-COA dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; HET: FAD; 1.65A {Thermus thermophilus} SCOP: a.29.3.1 e.6.1.1 PDB: 1ws9_A 2cx9_A*
Probab=100.00 E-value=2.4e-37 Score=318.95 Aligned_cols=227 Identities=40% Similarity=0.643 Sum_probs=206.8
Q ss_pred CHHHHHHhhhHhhcCC-ceeEEecCCCCCCCcCCCeeEEEEeCCEEEEeeEEeeeeCCCCCcEEEEEEEecCCC----Cc
Q psy5138 2 TTEQKEKYLPRLAQTD-AGSFALSEPGSGSDAFAMKTTATKDGNHYILNGSKMWISNADIANIFLVMANVDVSK----GY 76 (575)
Q Consensus 2 ~~~qk~~~l~~~~~g~-~~~~a~se~~~g~~~~~~~~~a~~~~~g~~l~G~k~~~t~~~~ad~~~v~a~~~~~~----~~ 76 (575)
+++||++|+|++++|+ ++++++|||++|+|+..++|++++++|||+|||+|.|+||+..||+++|+++++++. ++
T Consensus 105 ~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~~~~~~~~~~~~ 184 (387)
T 2d29_A 105 SEAQKEAFLPKLASGEALGAWGLTEPGSGSDAAALKTKAEKVEGGWRLNGTKQFITQGSVAGVYVVMARTDPPPSPERKH 184 (387)
T ss_dssp CHHHHHHHHHHHHTSSSCEEEECCBTTBSSSGGGCCCEEEEETTEEEEEEEEEEEETTTTCSEEEEEEECSCCSCGGGTT
T ss_pred CHHHHHHHHHHHhCCCceEEEEeCCCCCCCCHhhCceEEEEeCCEEEEEeEEeccCCCCcCCEEEEEEEeCCccccCCCC
Confidence 6899999999999999 699999999999999999999999999999999999999999999999999986432 44
Q ss_pred cceeEEEEecCCCCeEEcccCcccCCCCCCceeEEeeeeEeCCCCcccCCCCcHHHHHHhhhHHHHHHHHHHHHHHHHHH
Q psy5138 77 RGITCFIVERSMEGFSVGKKENKLGMKASGTCSLHFDNVRVPEENIISGVGEGYKIAAGFLNQGRIGIAAQMTGLAQGCL 156 (575)
Q Consensus 77 ~~~~~~~vp~~~~Gv~~~~~~~~~g~~~~~~~~v~f~~v~Vp~~~~l~~~~~g~~~~~~~~~~~~~~~~a~~~G~~~~a~ 156 (575)
.++++|+||.+.|||++.+.|+++|++++++++|.||||+||++++++.++.|+......+...|+.+++.++|++++++
T Consensus 185 ~g~~~flV~~~~pGv~v~~~~~~~g~~~~~~~~v~f~~v~Vp~~~~lg~~~~g~~~~~~~l~~~r~~~aa~~~G~a~~al 264 (387)
T 2d29_A 185 QGISAFAFFRPERGLKVGRKEEKLGLTASDTAQLILEDLFVPEEALLGERGKGFYDVLRVLDGGRIGIAAMAVGLGQAAL 264 (387)
T ss_dssp TTEEEEEEECCSSSEEECCCCCCSSCTTSCEEEEEEEEEEEEGGGEESSTTBHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEeCCCCCeeccCcccccCCCCCCeeEEEEeeEEECHHHcCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999998899988888899999999999999999999
Q ss_pred HHHHHHhhhhcccCccccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHH
Q psy5138 157 DATIPYTLERSQVGHRIFDFQACNGGSVQHQISQAVTQVECARLLTYNAARLLEAGQPFIKQASMAKYFASVAKLAKET 235 (575)
Q Consensus 157 ~~a~~~a~~r~~~g~~~~~~q~~~~~~vq~~la~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 235 (575)
+.+++|+++|++||+|+.+||. +|+++++|.+.++++|++++++++.++.+.+...+..+.| ..+.+.+.+.
T Consensus 265 ~~a~~ya~~R~~fg~~i~~~q~-----vq~~la~~~~~~~aar~~~~~aa~~~~~g~~~~~~~~~aK--~~a~~~a~~~ 336 (387)
T 2d29_A 265 DYALAYAKGREAFGRPIAEFEG-----VSFKLAEAATELEAARLLYLKAAELKDAGRPFTLEAAQAK--LFASEAAVKA 336 (387)
T ss_dssp HHHHHHHHHCEETTEEGGGSHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHH--HHHHHHHHHH
T ss_pred HHHHHHHHhCccCCcchHhhHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHH--HHHHHHHHHH
Confidence 9999999999999999999998 9999999999999999999999999998766555666666 3344444443
No 41
>2jif_A Short/branched chain specific acyl-COA dehydrogen; mitochondrion, oxidoreductase, transit peptide, fatty acid metabolism, FAD, flavoprotein; HET: FAD COS; 2.0A {Homo sapiens}
Probab=100.00 E-value=1.7e-37 Score=321.30 Aligned_cols=227 Identities=63% Similarity=1.022 Sum_probs=206.9
Q ss_pred CHHHHHHhhhHhhcCCceeEEecCCCCCCCcCCCeeEEEEeCCEEEEeeEEeeeeCCCCCcEEEEEEEecCCCCccceeE
Q psy5138 2 TTEQKEKYLPRLAQTDAGSFALSEPGSGSDAFAMKTTATKDGNHYILNGSKMWISNADIANIFLVMANVDVSKGYRGITC 81 (575)
Q Consensus 2 ~~~qk~~~l~~~~~g~~~~~a~se~~~g~~~~~~~~~a~~~~~g~~l~G~k~~~t~~~~ad~~~v~a~~~~~~~~~~~~~ 81 (575)
|++||++|||++.+|+++++++|||++|+|+..++|++++++|||+|||+|.|+||+..||+++|+++++++++..++++
T Consensus 127 ~~~qk~~~l~~~~~g~~~~~a~tEp~~Gsd~~~~~t~A~~~g~g~vlnG~K~~is~a~~Ad~~~v~ar~~~~~~~~g~~~ 206 (404)
T 2jif_A 127 TEEQKATYLPQLTTEKVGSFCLSEAGAGSDSFALKTRADKEGDYYVLNGSKMWISSAEHAGLFLVMANVDPTIGYKGITS 206 (404)
T ss_dssp CHHHHHHHHHHHHHTCCEEEECCBTTBSSSGGGCCCEEEEETTEEEEEEEEEEEETTTTCSEEEEEEESCGGGGGGGEEE
T ss_pred CHHHHHHHHHHHhCCCcceEEecCCCCCCChhhceeEEEEeCCEEEEEeEEEeecCCcccCEEEEEEEeCCCCCCCceEE
Confidence 68999999999999988999999999999999999999999999999999999999999999999999764444457899
Q ss_pred EEEecCCCCeEEcccCcccCCCCCCceeEEeeeeEeCCCCcccCCCCcHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHH
Q psy5138 82 FIVERSMEGFSVGKKENKLGMKASGTCSLHFDNVRVPEENIISGVGEGYKIAAGFLNQGRIGIAAQMTGLAQGCLDATIP 161 (575)
Q Consensus 82 ~~vp~~~~Gv~~~~~~~~~g~~~~~~~~v~f~~v~Vp~~~~l~~~~~g~~~~~~~~~~~~~~~~a~~~G~~~~a~~~a~~ 161 (575)
|+||.+.|||++.+.|+++|++++++++|.||||+||++++++.++.|+......+...|+.+++.++|+++++++.+++
T Consensus 207 flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~g~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ 286 (404)
T 2jif_A 207 FLVDRDTPGLHIGKPENKLGLRASSTCPLTFENVKVPEANILGQIGHGYKYAIGSLNEGRIGIAAQMLGLAQGCFDYTIP 286 (404)
T ss_dssp EEEETTCTTEEECCCCCBSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecCCCCeEeccCcccccCCCCceEEEEEccEEECHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998888888999999999999999999999999
Q ss_pred HhhhhcccCccccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHH
Q psy5138 162 YTLERSQVGHRIFDFQACNGGSVQHQISQAVTQVECARLLTYNAARLLEAGQPFIKQASMAKYFASVAKLAKET 235 (575)
Q Consensus 162 ~a~~r~~~g~~~~~~q~~~~~~vq~~la~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 235 (575)
|+++|+|||+|+.+||. +|+++++|.+.++++|++++++++.++.+.+...+.++.| ..+.+.+.+.
T Consensus 287 ya~~R~~fG~~i~~~q~-----vq~~la~~~~~~~aar~~~~~aa~~~~~g~~~~~~~~~aK--~~a~e~a~~v 353 (404)
T 2jif_A 287 YIKERIQFGKRLFDFQG-----LQHQVAHVATQLEAARLLTYNAARLLEAGKPFIKEASMAK--YYASEIAGQT 353 (404)
T ss_dssp HHHHCEETTEEGGGSHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHH--HHHHHHHHHH
T ss_pred HHHhCcccCCcccccHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccHHHHHHHH--HHHHHHHHHH
Confidence 99999999999999998 9999999999999999999999999988766655666666 3344444443
No 42
>3r7k_A Probable acyl COA dehydrogenase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: FDA; 2.50A {Mycobacterium abscessus}
Probab=100.00 E-value=2.3e-37 Score=320.57 Aligned_cols=226 Identities=27% Similarity=0.474 Sum_probs=208.6
Q ss_pred CHHHHHHhhhHhhcCC-ceeEEecCCCCCCCcCCCeeEEEEeCCEEEEeeEEeeeeCCCCCcEEEEEEEecCCCCcccee
Q psy5138 2 TTEQKEKYLPRLAQTD-AGSFALSEPGSGSDAFAMKTTATKDGNHYILNGSKMWISNADIANIFLVMANVDVSKGYRGIT 80 (575)
Q Consensus 2 ~~~qk~~~l~~~~~g~-~~~~a~se~~~g~~~~~~~~~a~~~~~g~~l~G~k~~~t~~~~ad~~~v~a~~~~~~~~~~~~ 80 (575)
|++||++|||++++|+ ++++++|||++|+|+..++|++++++|||+|||+|.|+||+..||+++|+++++++ +..+++
T Consensus 128 ~~~q~~~~l~~~~~G~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~vs~a~~Ad~~~v~a~~~~~-~~~g~~ 206 (403)
T 3r7k_A 128 SDALIERYVRPTLAGKMIGSLGVTEPGAGSDVANLRTRAVREGDTYVVNGAKTFITSGVRADFVTTAVRTGGP-GYGGVS 206 (403)
T ss_dssp CHHHHHHHHHHHHTTSCCEEEECCBTTBSSCGGGCCCEEEECSSEEEEEEEEEEEETTTTCSEEEEEEECSSS-SGGGEE
T ss_pred CHHHHHHHHHHHhCCCeeEEEEecCCCCCCChhhceEEEEEECCEEEEEEEEEcccCCccCCEEEEEEEcCCC-CCCceE
Confidence 6899999999999999 68999999999999999999999999999999999999999999999999998754 556799
Q ss_pred EEEEecCCCCeEEcccCcccCCCCCCceeEEeeeeEeCCCCcccCCCCcHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHH
Q psy5138 81 CFIVERSMEGFSVGKKENKLGMKASGTCSLHFDNVRVPEENIISGVGEGYKIAAGFLNQGRIGIAAQMTGLAQGCLDATI 160 (575)
Q Consensus 81 ~~~vp~~~~Gv~~~~~~~~~g~~~~~~~~v~f~~v~Vp~~~~l~~~~~g~~~~~~~~~~~~~~~~a~~~G~~~~a~~~a~ 160 (575)
+|+||.+.|||++.+.|+++|++++++++|.||||+||++++++.++.|+......+...|+.+++.++|+++++++.++
T Consensus 207 ~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~ 286 (403)
T 3r7k_A 207 LLVIDKNSPGFEVSRRLDKMGWRCSDTAELSFVDVRVPADNLVGAENSGFLQIMQQFQAERLGIAVQAYATAGRALDLAK 286 (403)
T ss_dssp EEEEETTCTTEEEEEECCBSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCCeEecCcccccCCCCCCceEEEEeeEEECHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhcccCccccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHH
Q psy5138 161 PYTLERSQVGHRIFDFQACNGGSVQHQISQAVTQVECARLLTYNAARLLEAGQPFIKQASMAKYFASVAKLAKET 235 (575)
Q Consensus 161 ~~a~~r~~~g~~~~~~q~~~~~~vq~~la~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 235 (575)
+|+++|+|||+|+.+||. +|+++++|.+.++++|++++++++.++.+.+...+..+.| ..+.+.+.+.
T Consensus 287 ~ya~~R~~fg~~i~~~q~-----vq~~la~~~~~~~aar~~~~~aa~~~d~~~~~~~~~~~aK--~~a~~~a~~v 354 (403)
T 3r7k_A 287 SWARERETFGRPLTGRQI-----IRHKLAEMARQVDVACTYTRAVMQRWLAGEDVVAEVSMAK--NTAVYACDYV 354 (403)
T ss_dssp HHHHHCEETTEEGGGSHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHH--HHHHHHHHHH
T ss_pred HHHHcCccCCCchhhcHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCcHHHHHHHH--HHHHHHHHHH
Confidence 999999999999999998 9999999999999999999999999998876666666666 3344444443
No 43
>3p4t_A Putative acyl-COA dehydrogenase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: FAO; 1.70A {Mycobacterium smegmatis} PDB: 3oib_A*
Probab=100.00 E-value=3.1e-37 Score=319.55 Aligned_cols=226 Identities=28% Similarity=0.493 Sum_probs=207.7
Q ss_pred CHHHHHHhhhHhhcCC-ceeEEecCCCCCCCcCCCeeEEEEeCCEEEEeeEEeeeeCCCCCcEEEEEEEecCCCCcccee
Q psy5138 2 TTEQKEKYLPRLAQTD-AGSFALSEPGSGSDAFAMKTTATKDGNHYILNGSKMWISNADIANIFLVMANVDVSKGYRGIT 80 (575)
Q Consensus 2 ~~~qk~~~l~~~~~g~-~~~~a~se~~~g~~~~~~~~~a~~~~~g~~l~G~k~~~t~~~~ad~~~v~a~~~~~~~~~~~~ 80 (575)
|++||++|||++++|+ ++++++|||++|+|+..++|++++++|||+|||+|.|+||+..||+++|+++++++ +..+++
T Consensus 125 ~~~q~~~~l~~~~~G~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~vs~a~~Ad~~~v~a~~~~~-~~~g~~ 203 (403)
T 3p4t_A 125 DQRLIDTYVRPTLRGEKIGALAITEPGGGSDVGHLRTRADLDGDHYVINGAKTYITSGVRADYVVTAARTGGP-GAGGVS 203 (403)
T ss_dssp CHHHHHHTHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEEETTTTCSEEEEEEECSSS-SGGGEE
T ss_pred CHHHHHHHHHHHhCCCeEEEEEecCCCCCCCcccceEEEEEeCCEEEEEEEEEEecCCcccCEEEEEEEeCCC-CCCceE
Confidence 6899999999999999 68999999999999999999999999999999999999999999999999998754 456799
Q ss_pred EEEEecCCCCeEEcccCcccCCCCCCceeEEeeeeEeCCCCcccCCCCcHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHH
Q psy5138 81 CFIVERSMEGFSVGKKENKLGMKASGTCSLHFDNVRVPEENIISGVGEGYKIAAGFLNQGRIGIAAQMTGLAQGCLDATI 160 (575)
Q Consensus 81 ~~~vp~~~~Gv~~~~~~~~~g~~~~~~~~v~f~~v~Vp~~~~l~~~~~g~~~~~~~~~~~~~~~~a~~~G~~~~a~~~a~ 160 (575)
+|+||.+.|||++.+.|+++|++++++++|.||||+||++++|+.++.|+......+...|+.+++.++|+++++++.++
T Consensus 204 ~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fddv~Vp~~~~lg~~~~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~ 283 (403)
T 3p4t_A 204 LIVVDKGTPGFEVTRKLDKMGWRSSDTAELSYTDVRVPVANLVGSENTGFAQIAAAFVAERVGLATQAYAGAQRCLDLTV 283 (403)
T ss_dssp EEEEETTCTTEEEEEECCBSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCCeEecCCCCcccCCCCCeeEEEEcceEecHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhcccCccccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCc-hHHHHHHHHHHHHHHHHHHH
Q psy5138 161 PYTLERSQVGHRIFDFQACNGGSVQHQISQAVTQVECARLLTYNAARLLEAGQPF-IKQASMAKYFASVAKLAKET 235 (575)
Q Consensus 161 ~~a~~r~~~g~~~~~~q~~~~~~vq~~la~~~~~~~~~~~~~~~a~~~~~~~~~~-~~~~~~~~~~~~a~~~~~~~ 235 (575)
+|+++|++||+|+++||. +|+++++|.+.++++|++++++++.++.+.+. ..+..+.| ..+.+.+.+.
T Consensus 284 ~~a~~R~~fg~pi~~~q~-----vq~~la~~~~~~~aar~~~~~aa~~~d~~~~~~~~~~~~aK--~~a~~~a~~v 352 (403)
T 3p4t_A 284 EWCRNRDTFGRPLISRQA-----VQNTLAGMARRIDVARVYTRHVVERQLAGETNLIAEVCFAK--NTAVEAGEWV 352 (403)
T ss_dssp HHHHHCEETTEEGGGSHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHH--HHHHHHHHHH
T ss_pred HHHHhCccCCCcccccHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCchhHHHHHH--HHHHHHHHHH
Confidence 999999999999999998 99999999999999999999999999987655 55566666 3344444443
No 44
>1buc_A Butyryl-COA dehydrogenase; acyl-COA dehydrogenase short-chain acyl-COA dehydrogenase, flavoprotein, oxidoreductase; HET: CAA FAD; 2.50A {Megasphaera elsdenii} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=3e-37 Score=317.91 Aligned_cols=227 Identities=42% Similarity=0.686 Sum_probs=207.3
Q ss_pred CHHHHHHhhhHhhcCC-ceeEEecCCCCCCCcCCCeeEEEEe-CCEEEEeeEEeeeeCCCCCcEEEEEEEecCCCCccce
Q psy5138 2 TTEQKEKYLPRLAQTD-AGSFALSEPGSGSDAFAMKTTATKD-GNHYILNGSKMWISNADIANIFLVMANVDVSKGYRGI 79 (575)
Q Consensus 2 ~~~qk~~~l~~~~~g~-~~~~a~se~~~g~~~~~~~~~a~~~-~~g~~l~G~k~~~t~~~~ad~~~v~a~~~~~~~~~~~ 79 (575)
|++||++|||++.+|+ ++++++|||++|+|+..++|+++++ +|||+|||+|.|+||+..||+++|++++++++++.++
T Consensus 106 ~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~~~~~~~~~g~ 185 (383)
T 1buc_A 106 TEAQKEKFLVPLVEGTKLGAFGLTEPNAGTDASGQQTIATKNDDGTYTLNGSKIFITNGGAADIYIVFAMTDKSKGNHGI 185 (383)
T ss_dssp CHHHHHHTHHHHHHTSSCEEEECCBTTBSSCGGGCCCEEEECTTSCEEEEEEEEEEETTTTCSEEEEEEESCSSSSTTSE
T ss_pred CHHHHHHHHHHHhCCCeeEEEEeCCCCCCCChhhCEeEEEEcCCCEEEEEEEEeccCCCCcCCEEEEEEEeCCCCCCCce
Confidence 6899999999999999 6999999999999999999999999 9999999999999999999999999998654445678
Q ss_pred eEEEEecCCCCeEEcccCcccCCCCCCceeEEeeeeEeCCCCcccCCCCcHHHHHHhhhHHHHHHHHHHHHHHHHHHHHH
Q psy5138 80 TCFIVERSMEGFSVGKKENKLGMKASGTCSLHFDNVRVPEENIISGVGEGYKIAAGFLNQGRIGIAAQMTGLAQGCLDAT 159 (575)
Q Consensus 80 ~~~~vp~~~~Gv~~~~~~~~~g~~~~~~~~v~f~~v~Vp~~~~l~~~~~g~~~~~~~~~~~~~~~~a~~~G~~~~a~~~a 159 (575)
++|+||++.|||++.+.|+++|++++++++|.||||+||++++++.++.|+......+...|+.+++.++|+++++++.+
T Consensus 186 ~~flV~~~~~Gv~v~~~~~~~g~~~~~~~~v~f~~v~Vp~~~~lg~~g~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~~ 265 (383)
T 1buc_A 186 TAFILEDGTPGFTYGKKEDKMGIHTSQTMELVFQDVKVPAENMLGEEGKGFKIAMMTLDGGRIGVAAQALGIAEAALADA 265 (383)
T ss_dssp EEEEEETTCTTEEEEEECCCSSCTTSCEEEEEEEEEEECGGGEESCTTBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEECCCCCeEecCccccccccCCceeEEEEccEEeCHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998999988888889999999999999999999999
Q ss_pred HHHhhhhcccCccccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHH
Q psy5138 160 IPYTLERSQVGHRIFDFQACNGGSVQHQISQAVTQVECARLLTYNAARLLEAGQPFIKQASMAKYFASVAKLAKET 235 (575)
Q Consensus 160 ~~~a~~r~~~g~~~~~~q~~~~~~vq~~la~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 235 (575)
++|+++|++||+|+.+||. +|+++++|.+.++++|++++++++.++.+.+...+..+.| ..+.+.+.+.
T Consensus 266 ~~ya~~R~~fG~~i~~~q~-----vq~~la~~~~~~~~ar~~~~~aa~~~~~g~~~~~~~~~aK--~~a~~~a~~~ 334 (383)
T 1buc_A 266 VEYSKQRVQFGKPLCKFQS-----ISFKLADMKMQIEAARNLVYKAACKKQEGKPFTVDAAIAK--RVASDVAMRV 334 (383)
T ss_dssp HHHHHHCEETTEEGGGSHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHH--HHHHHHHHHH
T ss_pred HHHHHhCeeCCcchhhhHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHH--HHHHHHHHHH
Confidence 9999999999999999998 9999999999999999999999999988766666666666 3344444443
No 45
>1egd_A Medium chain acyl-COA dehydrogenase; flavoprotein, electron transfer; HET: FAD; 2.40A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1 PDB: 1egc_A* 1ege_A* 1t9g_A* 2a1t_A* 1udy_A* 3mdd_A* 3mde_A*
Probab=100.00 E-value=4.8e-37 Score=317.57 Aligned_cols=228 Identities=36% Similarity=0.608 Sum_probs=207.2
Q ss_pred CHHHHHHhhhHhhcCC-ceeEEecCCCCCCCcCCCeeEEEEeCCEEEEeeEEeeeeCCCCCcEEEEEEEecCCCCc---c
Q psy5138 2 TTEQKEKYLPRLAQTD-AGSFALSEPGSGSDAFAMKTTATKDGNHYILNGSKMWISNADIANIFLVMANVDVSKGY---R 77 (575)
Q Consensus 2 ~~~qk~~~l~~~~~g~-~~~~a~se~~~g~~~~~~~~~a~~~~~g~~l~G~k~~~t~~~~ad~~~v~a~~~~~~~~---~ 77 (575)
|++||++|||++.+|+ ++++++|||++|+|...+++++++++|||+|||+|.|+||+..||+++|+++++++.+. .
T Consensus 113 ~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~~~~~~~~~~~~ 192 (396)
T 1egd_A 113 NDQQKKKYLGRMTEEPLMCAYCVTEPGAGSDVAGIKTKAEKKGDEYIINGQKMWITNGGKANWYFLLARSDPDPKAPANK 192 (396)
T ss_dssp CHHHHHHHHHHHHHSCCCEEEECCBTTBSSSGGGCCCEEEECSSEEEEEEEEEEEETTTTCSEEEEEEECCCCTTSCGGG
T ss_pred CHHHHHHHHHHHhCCCceEEEEecCCCCCcchhhCeeEEEEeCCEEEEEEEEEcccCCcccCEEEEEEEeCCCCCCCCCC
Confidence 6899999999999999 69999999999999999999999999999999999999999999999999998644333 5
Q ss_pred ceeEEEEecCCCCeEEcccCcccCCCCCCceeEEeeeeEeCCCCcccCCCCcHHHHHHhhhHHHHHHHHHHHHHHHHHHH
Q psy5138 78 GITCFIVERSMEGFSVGKKENKLGMKASGTCSLHFDNVRVPEENIISGVGEGYKIAAGFLNQGRIGIAAQMTGLAQGCLD 157 (575)
Q Consensus 78 ~~~~~~vp~~~~Gv~~~~~~~~~g~~~~~~~~v~f~~v~Vp~~~~l~~~~~g~~~~~~~~~~~~~~~~a~~~G~~~~a~~ 157 (575)
++++|+||.+.|||++.+.|+++|++++++++|.||||+||++++|+.++.|+......+...|+.+++.++|+++++++
T Consensus 193 g~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~~g~~~~~~~l~~~r~~~aa~~~G~a~~al~ 272 (396)
T 1egd_A 193 AFTGFIVEADTPGIQIGRKELNMGQRCSDTRGIVFEDVKVPKENVLIGDGAGFKVAMGAFDKERPVVAAGAVGLAQRALD 272 (396)
T ss_dssp TEEEEEEETTCTTEEECCCCCBSSCTTSCEEEEEEEEEEEEGGGBSSSTTBHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEeCCCCCeeeCCccccccccCCCeeEEEECcEEECHHHcCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78899999999999999999999999999999999999999999999999999888888999999999999999999999
Q ss_pred HHHHHhhhhcccCccccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHh
Q psy5138 158 ATIPYTLERSQVGHRIFDFQACNGGSVQHQISQAVTQVECARLLTYNAARLLEAGQPFIKQASMAKYFASVAKLAKETI 236 (575)
Q Consensus 158 ~a~~~a~~r~~~g~~~~~~q~~~~~~vq~~la~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 236 (575)
.+++|+++|++||+|+.+||. +|++|++|.+.++++|++++++++.++.+.+...+.++.| ..+.+.+.+..
T Consensus 273 ~a~~ya~~R~~fG~~i~~~q~-----vq~~la~~~~~~~aar~~~~~aa~~~~~g~~~~~~~~~aK--~~a~~~a~~~~ 344 (396)
T 1egd_A 273 EATKYALERKTFGKLLVEHQA-----ISFMLAEMAMKVELARMSYQRAAWEVDSGRRNTYYASIAK--AFAGDIANQLA 344 (396)
T ss_dssp HHHHHHTTCEETTEEGGGSHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCHHHHHHHH--HHHHHHHHHHH
T ss_pred HHHHHHhcCccCCcchhhhHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchHHHHHHH--HHHHHHHHHHH
Confidence 999999999999999999998 9999999999999999999999999998766666666666 33444444443
No 46
>2vig_A Short-chain specific acyl-COA dehydrogenase,; fatty acid metabolism, FAD, polymorphism, flavoprotein, mitochondrion, disease mutation; HET: FAD COS; 1.9A {Homo sapiens} PDB: 1jqi_A*
Probab=100.00 E-value=3.8e-37 Score=317.77 Aligned_cols=227 Identities=41% Similarity=0.663 Sum_probs=207.1
Q ss_pred CHHHHHHhhhHhhcCC-ceeEEecCCCCCCCcCCCeeEEEEeCCEEEEeeEEeeeeCCCCCcEEEEEEEecCCCCcccee
Q psy5138 2 TTEQKEKYLPRLAQTD-AGSFALSEPGSGSDAFAMKTTATKDGNHYILNGSKMWISNADIANIFLVMANVDVSKGYRGIT 80 (575)
Q Consensus 2 ~~~qk~~~l~~~~~g~-~~~~a~se~~~g~~~~~~~~~a~~~~~g~~l~G~k~~~t~~~~ad~~~v~a~~~~~~~~~~~~ 80 (575)
+++||++|||++.+|+ ++++++|||++|+|+..++|++++++|||+|||+|.|+||+..||+++|++++++++++.+++
T Consensus 104 ~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~~~~~~~~~g~~ 183 (391)
T 2vig_A 104 SKEQKQAWVTPFTSGDKIGCFALSEPGNGSDAGAASTTARAEGDSWVLNGTKAWITNAWEASAAVVFASTDRALQNKSIS 183 (391)
T ss_dssp CHHHHHHHTGGGSSSSCCEEEECCBTTBSSSGGGCCCEEEEETTEEEEEEEEEEEETTTTCSEEEEEEECCSSSTTSCEE
T ss_pred CHHHHHHHHHHHhCCCceEEEEecCCCCCCCcccceeEEEEeCCEEEEeeEEEeecCCCcCCEEEEEEEeCCCCCCCceE
Confidence 6899999999999999 699999999999999999999999999999999999999999999999999986443445789
Q ss_pred EEEEecCCCCeEEcccCcccCCCCCCceeEEeeeeEeCCCCcccCCCCcHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHH
Q psy5138 81 CFIVERSMEGFSVGKKENKLGMKASGTCSLHFDNVRVPEENIISGVGEGYKIAAGFLNQGRIGIAAQMTGLAQGCLDATI 160 (575)
Q Consensus 81 ~~~vp~~~~Gv~~~~~~~~~g~~~~~~~~v~f~~v~Vp~~~~l~~~~~g~~~~~~~~~~~~~~~~a~~~G~~~~a~~~a~ 160 (575)
+|+||.+.|||++.+.|+++|++++++++|.||||+||++++++.++.|+......+...|+.+++.++|+++++++.++
T Consensus 184 ~flV~~~~pGv~v~~~~~~~g~r~~~~~~v~fd~v~Vp~~~~lg~~g~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~ 263 (391)
T 2vig_A 184 AFLVPMPTPGLTLGKKEDKLGIRGSSTANLIFEDCRIPKDSILGEPGMGFKIAMQTLDMGRIGIASQALGIAQTALDCAV 263 (391)
T ss_dssp EEEEESSCTTEEECCCCCBSSCTTSCEEEEEEEEEEEEGGGEESSTTBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCCeEecCccccccCCCCCeeEEEECcEEECHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999888888999999999999999999999999
Q ss_pred HHhhhhcccCccccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHH
Q psy5138 161 PYTLERSQVGHRIFDFQACNGGSVQHQISQAVTQVECARLLTYNAARLLEAGQPFIKQASMAKYFASVAKLAKET 235 (575)
Q Consensus 161 ~~a~~r~~~g~~~~~~q~~~~~~vq~~la~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 235 (575)
+|+++|++||+|+++||. +|+++++|.+.++++|++++++++.++.+.+...+..+.| ..+.+.+.+.
T Consensus 264 ~ya~~R~~fg~~i~~~q~-----v~~~la~~~~~~~aar~~~~~aa~~~~~g~~~~~~~~~aK--~~a~~~a~~~ 331 (391)
T 2vig_A 264 NYAENRMAFGAPLTKLQV-----IQFKLADMALALESARLLTWRAAMLKDNKKPFIKEAAMAK--LAASEAATAI 331 (391)
T ss_dssp HHHHHCEETTEEGGGSHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHH--HHHHHHHHHH
T ss_pred HHHHhCccCCCcchhhHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHH--HHHHHHHHHH
Confidence 999999999999999998 9999999999999999999999999988766555666666 3344444443
No 47
>3pfd_A Acyl-COA dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: FDA; 2.10A {Mycobacterium thermoresistibile}
Probab=100.00 E-value=2.5e-37 Score=319.32 Aligned_cols=217 Identities=44% Similarity=0.664 Sum_probs=201.8
Q ss_pred CHHHHHHhhhHhhcCC-ceeEEecCCCCCCCcCCCeeEEEEeCCEEEEeeEEeeeeCCCCCcEEEEEEEecCCCCcccee
Q psy5138 2 TTEQKEKYLPRLAQTD-AGSFALSEPGSGSDAFAMKTTATKDGNHYILNGSKMWISNADIANIFLVMANVDVSKGYRGIT 80 (575)
Q Consensus 2 ~~~qk~~~l~~~~~g~-~~~~a~se~~~g~~~~~~~~~a~~~~~g~~l~G~k~~~t~~~~ad~~~v~a~~~~~~~~~~~~ 80 (575)
|++||++|||++.+|+ ++++++|||++|+|+..++|++++++|||+|||+|.|+||+..||+++|+++++++++..+++
T Consensus 116 ~~~q~~~~l~~~~~G~~~~~~a~tEp~~gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~~~~~~~~~g~~ 195 (393)
T 3pfd_A 116 SEELKKQVLPAVASGEAMASYALSEREAGSDAASMRTRAVADGDDWILNGSKCWITNGGKSTWYTVMAVTDPDKGANGIS 195 (393)
T ss_dssp CHHHHHHHHHHHHTTSCCEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEEETTTTCSEEEEEEESCGGGGGGGEE
T ss_pred CHHHHHHHHHHHhCCCceeEEEEcCCCCCCCcccCeeEEEEcCCEEEEeeEEEEecCCcccCEEEEEEEeCCCCCCCceE
Confidence 6899999999999999 699999999999999999999999999999999999999999999999999987554556799
Q ss_pred EEEEecCCCCeEEcccCcccCCCCCCceeEEeeeeEeCCCCcccCCCCcHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHH
Q psy5138 81 CFIVERSMEGFSVGKKENKLGMKASGTCSLHFDNVRVPEENIISGVGEGYKIAAGFLNQGRIGIAAQMTGLAQGCLDATI 160 (575)
Q Consensus 81 ~~~vp~~~~Gv~~~~~~~~~g~~~~~~~~v~f~~v~Vp~~~~l~~~~~g~~~~~~~~~~~~~~~~a~~~G~~~~a~~~a~ 160 (575)
+|+||.+.|||++.+.|+++|++++++++|.||||+||++++++.++.|+......+...|+.+++.++|+++++++.++
T Consensus 196 ~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fddv~Vp~~~~lg~~g~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~ 275 (393)
T 3pfd_A 196 AFMVHKDDEGFTVGPKERKLGIKGSPTTELYFENCRIPGDRIIGEPGTGFKTALATLDHTRPTIGAQAVGIAQGALDAAI 275 (393)
T ss_dssp EEEEETTSTTEEEEEECCBSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEECCCCCeEecCCCCcccCCCCCceEEEEccEEEcHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhcccCccccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC-chHHHHHHH
Q psy5138 161 PYTLERSQVGHRIFDFQACNGGSVQHQISQAVTQVECARLLTYNAARLLEAGQP-FIKQASMAK 223 (575)
Q Consensus 161 ~~a~~r~~~g~~~~~~q~~~~~~vq~~la~~~~~~~~~~~~~~~a~~~~~~~~~-~~~~~~~~~ 223 (575)
+|+++|++||+|+.+||. +|+++++|.+.++++|++++++++.++.+.. ...+.++.|
T Consensus 276 ~~a~~R~~fg~~i~~~q~-----vq~~la~~~~~~~aar~~~~~aa~~~~~~~~~~~~~~~~aK 334 (393)
T 3pfd_A 276 AYTKERKQFGRPVSDNQG-----VQFMLADMAMKIEAARLMVYSAAARAERGEGDLGFISAASK 334 (393)
T ss_dssp HHHHHCEETTEEGGGSHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHC----CHHHHHHH
T ss_pred HHHhcCccCCcchhhhHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcchHHHHHHHH
Confidence 999999999999999998 9999999999999999999999999988754 445555555
No 48
>2pg0_A Acyl-COA dehydrogenase; GK1316, geobacillus kaustophilus HTA structural genomics, PSI, protein structure initiative; HET: FAD; 1.80A {Geobacillus kaustophilus}
Probab=100.00 E-value=4.9e-37 Score=316.43 Aligned_cols=228 Identities=33% Similarity=0.531 Sum_probs=207.5
Q ss_pred CHHHHHHhhhHhhcCC-ceeEEecCCCCCCCcCCCeeEEEEeCCEEEEeeEEeeeeCCCCCcEEEEEEEecCC--CCccc
Q psy5138 2 TTEQKEKYLPRLAQTD-AGSFALSEPGSGSDAFAMKTTATKDGNHYILNGSKMWISNADIANIFLVMANVDVS--KGYRG 78 (575)
Q Consensus 2 ~~~qk~~~l~~~~~g~-~~~~a~se~~~g~~~~~~~~~a~~~~~g~~l~G~k~~~t~~~~ad~~~v~a~~~~~--~~~~~ 78 (575)
|++||++|+|++.+|+ ++++++|||++|+|+..++|++++++|||+|||+|.|+||+..||+++|+++++++ +++.+
T Consensus 107 ~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~~~~~~~~~~~g 186 (385)
T 2pg0_A 107 TEEQKQKWLPKCVTGELITAIAMTEPGAGSDLANISTTAVKDGDYYIVNGQKTFITNGIHADLIVVACKTDPQAKPPHRG 186 (385)
T ss_dssp CHHHHHHHHHHHHHTSSCEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEETTTTTCSEEEEEEESCTTCSSGGGG
T ss_pred CHHHHHHHHHHHhCCCeEEEEEeCCCCCCcCHhhCeEEEEEcCCEEEEEeEEecccCCcccCEEEEEEEeCCccCCCCCc
Confidence 6899999999999999 69999999999999999999999999999999999999999999999999998643 34457
Q ss_pred eeEEEEecCCCCeEEcccCcccCCCCCCceeEEeeeeEeCCCCcccCCCCcHHHHHHhhhHHHHHHHHHHHHHHHHHHHH
Q psy5138 79 ITCFIVERSMEGFSVGKKENKLGMKASGTCSLHFDNVRVPEENIISGVGEGYKIAAGFLNQGRIGIAAQMTGLAQGCLDA 158 (575)
Q Consensus 79 ~~~~~vp~~~~Gv~~~~~~~~~g~~~~~~~~v~f~~v~Vp~~~~l~~~~~g~~~~~~~~~~~~~~~~a~~~G~~~~a~~~ 158 (575)
+++|+||++.|||++.+.|+++|++++++++|.||||+||++++++.++.|+......+...|+.+++.++|+++++++.
T Consensus 187 ~~~flV~~~~pGv~v~~~~~~~g~~~~~~~~v~fd~v~Vp~~~~lg~~g~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~ 266 (385)
T 2pg0_A 187 ISLLVVERDTPGFTRGRKLEKVGLHAQDTAELFFQDAKVPAYNLLGEEGKGFYYLMEKLQQERLVVAIAAQTAAEVMFSL 266 (385)
T ss_dssp EEEEEEETTCTTEEECCCCCBSSCTTSCCEEEEEEEEEEEGGGEESCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEeCCCCCeEecCCccccccCCCceEEEEEcceEEcHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999888888999999999999999999999
Q ss_pred HHHHhhhhcccCccccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHh
Q psy5138 159 TIPYTLERSQVGHRIFDFQACNGGSVQHQISQAVTQVECARLLTYNAARLLEAGQPFIKQASMAKYFASVAKLAKETI 236 (575)
Q Consensus 159 a~~~a~~r~~~g~~~~~~q~~~~~~vq~~la~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 236 (575)
+++|+++|++||+|+.+||. +|+++++|.+.++++|++++++++.++.+.+...+.++.| ..+.+.+.+..
T Consensus 267 a~~ya~~R~~fg~~i~~~q~-----v~~~la~~~~~~~aar~~~~~aa~~~d~g~~~~~~~~~aK--~~a~e~a~~~~ 337 (385)
T 2pg0_A 267 TKQYVKQRTAFGKRVSEFQT-----VQFRLAEMATEIALGRTFVDRVIEEHMAGKQIVTEVSMAK--WWITEMAKRVA 337 (385)
T ss_dssp HHHHHHHCEETTEEGGGSHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHH--HHHHHHHHHHH
T ss_pred HHHHHhcCccCCCccchhHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHH--HHHHHHHHHHH
Confidence 99999999999999999998 9999999999999999999999999988766666666666 33444444443
No 49
>3nf4_A Acyl-COA dehydrogenase; seattle structural genomics center for infectious disease, S FAD, FADH, tuberculosis, oxidoredu; HET: FAD; 2.35A {Mycobacterium thermoresistibile}
Probab=100.00 E-value=8.9e-37 Score=314.86 Aligned_cols=225 Identities=38% Similarity=0.656 Sum_probs=200.3
Q ss_pred CHHHHHHhhhHhhcCC-ceeEEecCCCCCCCcCCCeeEEEEeCCEEEEeeEEeeeeCCCCCcEEEEEEEecCCCCcccee
Q psy5138 2 TTEQKEKYLPRLAQTD-AGSFALSEPGSGSDAFAMKTTATKDGNHYILNGSKMWISNADIANIFLVMANVDVSKGYRGIT 80 (575)
Q Consensus 2 ~~~qk~~~l~~~~~g~-~~~~a~se~~~g~~~~~~~~~a~~~~~g~~l~G~k~~~t~~~~ad~~~v~a~~~~~~~~~~~~ 80 (575)
+++||++|+|++.+|+ ++++++|||++|+|+..++|++++++|||+|||+|.|+||+..||+++|+++++ ++..+++
T Consensus 113 ~~~q~~~~l~~~~~g~~~~~~a~tEp~~gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~~~--~~~~g~~ 190 (387)
T 3nf4_A 113 TEEQKKRWLPGMLSGEQIGAYSLSEPQAGSDAAALRCAATPTDGGYVINGSKSWITHGGKADFYTLFARTG--EGSRGVS 190 (387)
T ss_dssp CHHHHHHHHHHHTTSSCCEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEEETTTTCSEEEEEEECC----CCCEE
T ss_pred CHHHHHHHHHHHhCCCeeEEEEEcCCCCCCChhhCEEEEEEeCCEEEEEeEEecccCCcccCEEEEEEEeC--CCCCceE
Confidence 6899999999999999 699999999999999999999999999999999999999999999999999976 2345789
Q ss_pred EEEEecCCCCeEEcccCcccCCCCCCceeEEeeeeEeCCCCcccCCCCcHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHH
Q psy5138 81 CFIVERSMEGFSVGKKENKLGMKASGTCSLHFDNVRVPEENIISGVGEGYKIAAGFLNQGRIGIAAQMTGLAQGCLDATI 160 (575)
Q Consensus 81 ~~~vp~~~~Gv~~~~~~~~~g~~~~~~~~v~f~~v~Vp~~~~l~~~~~g~~~~~~~~~~~~~~~~a~~~G~~~~a~~~a~ 160 (575)
+|+||.+.|||++.+.|+++|++++++++|.||||+||++++++.++.|+......+...|+.+++.++|+++++++.++
T Consensus 191 ~flV~~~~pGv~~~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~ 270 (387)
T 3nf4_A 191 CFLVPADQPGLSFGKPEEKMGLHAVPTTSAFYDNARIDADRRIGEEGQGLQIAFSALDSGRLGIAAVATGLAQAALDEAV 270 (387)
T ss_dssp EEEEETTCTTEEECCCCCBSSCCSSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEECCCCCeEecCcccccccCCCCeeEEEEeeEEecHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhcccCccccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHH
Q psy5138 161 PYTLERSQVGHRIFDFQACNGGSVQHQISQAVTQVECARLLTYNAARLLEAGQPFIKQASMAKYFASVAKLAKET 235 (575)
Q Consensus 161 ~~a~~r~~~g~~~~~~q~~~~~~vq~~la~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 235 (575)
+|+++|++||+|+.+||. +|+++++|.+.++++|++++++++.++.+.+...+.++.| ..+.+.+.+.
T Consensus 271 ~~a~~R~~fg~~i~~~q~-----v~~~la~~~~~~~aar~~~~~aa~~~~~~~~~~~~~~~aK--~~a~~~a~~~ 338 (387)
T 3nf4_A 271 AYANERTAFGRKIIDHQG-----LGFLLADMAAAVATARATYLDAARRRDQGRPYSQQASIAK--LTATDAAMKV 338 (387)
T ss_dssp HHHHC------CTTTC-C-----HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHH--HHHHHHHHHH
T ss_pred HHHHhCeeCCCchhhhHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCchHHHHHHH--HHHHHHHHHH
Confidence 999999999999999999 9999999999999999999999999998877766666666 3344444443
No 50
>1ivh_A Isovaleryl-COA dehydrogenase; oxidoreductase, acyl-COA dehydrogenase, flavoprotein, isovaleric acidemia; HET: FAD COS; 2.60A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=4.7e-37 Score=317.43 Aligned_cols=228 Identities=39% Similarity=0.633 Sum_probs=207.3
Q ss_pred CHHHHHHhhhHhhcCC-ceeEEecCCCCCCCcCCCeeEEEEeCCEEEEeeEEeeeeCCCCCcEEEEEEEecCC--CCccc
Q psy5138 2 TTEQKEKYLPRLAQTD-AGSFALSEPGSGSDAFAMKTTATKDGNHYILNGSKMWISNADIANIFLVMANVDVS--KGYRG 78 (575)
Q Consensus 2 ~~~qk~~~l~~~~~g~-~~~~a~se~~~g~~~~~~~~~a~~~~~g~~l~G~k~~~t~~~~ad~~~v~a~~~~~--~~~~~ 78 (575)
+++||++|||.+.+|+ ++++++|||++|+|+..+++++++++|||+|||+|.|+||+..||+++|+++++++ ++..+
T Consensus 113 ~~~q~~~~l~~l~~G~~~~~~a~tEp~~gsd~~~~~t~A~~~~~g~~lnG~K~~vs~~~~Ad~~~v~ar~~~~~~~~~~g 192 (394)
T 1ivh_A 113 NEAQKEKYLPKLISGEYIGALAMSEPNAGSDVVSMKLKAEKKGNHYILNGNKFWITNGPDADVLIVYAKTDLAAVPASRG 192 (394)
T ss_dssp CHHHHHHHHHHHHHTSSCEEEECCBTTBSSSGGGCCCEEEECSSEEEEEEEEEEEETGGGCSEEEEEEESCTTCSSGGGG
T ss_pred CHHHHHHHHHHHhCCCeEEEEEecCCCCCcCcccceEEEEEcCCEEEEEeEEEeeCCCCcCCEEEEEEEeCCcccCCCCC
Confidence 6899999999999999 69999999999999999999999999999999999999999999999999998643 33457
Q ss_pred eeEEEEecCCCCeEEcccCcccCCCCCCceeEEeeeeEeCCCCcccCCCCcHHHHHHhhhHHHHHHHHHHHHHHHHHHHH
Q psy5138 79 ITCFIVERSMEGFSVGKKENKLGMKASGTCSLHFDNVRVPEENIISGVGEGYKIAAGFLNQGRIGIAAQMTGLAQGCLDA 158 (575)
Q Consensus 79 ~~~~~vp~~~~Gv~~~~~~~~~g~~~~~~~~v~f~~v~Vp~~~~l~~~~~g~~~~~~~~~~~~~~~~a~~~G~~~~a~~~ 158 (575)
+++|+||.+.|||++.+.|+++|++++++++|.||||+||++++++.++.|+......+...|+.+++.++|+++++++.
T Consensus 193 ~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~ 272 (394)
T 1ivh_A 193 ITAFIVEKGMPGFSTSKKLDKLGMRGSNTCELIFEDCKIPAANILGHENKGVYVLMSGLDLERLVLAGGPLGLMQAVLDH 272 (394)
T ss_dssp EEEEEEETTCTTEEECCCCCBSSCTTSCEEEEEEEEEEEEGGGEESCTTCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred eEEEEEeCCCCCeEeccccccccCCCCCeeEEEECcEEEcHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999998888888999999999999999999999
Q ss_pred HHHHhhhhcccCccccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHh
Q psy5138 159 TIPYTLERSQVGHRIFDFQACNGGSVQHQISQAVTQVECARLLTYNAARLLEAGQPFIKQASMAKYFASVAKLAKETI 236 (575)
Q Consensus 159 a~~~a~~r~~~g~~~~~~q~~~~~~vq~~la~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 236 (575)
+++|+++|++||+|+++||. +|+++++|.+.++++|++++++++.++.+.+...+..+.| ..+.+.+.+..
T Consensus 273 a~~ya~~R~~fg~~i~~~q~-----vq~~la~~~~~~~aar~~~~~aa~~~~~g~~~~~~~~~aK--~~a~~~a~~~~ 343 (394)
T 1ivh_A 273 TIPYLHVREAFGQKIGHFQL-----MQGKMADMYTRLMACRQYVYNVAKACDEGHCTAKDCAGVI--LYSAECATQVA 343 (394)
T ss_dssp HHHHHTTCEETTEEGGGSHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHH--HHHHHHHHHHH
T ss_pred HHHHHHhCeeCCcchhccHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcchHHHHHHH--HHHHHHHHHHH
Confidence 99999999999999999998 9999999999999999999999999988766555666666 33444444443
No 51
>2dvl_A Acyl-COA dehydrogenase; structural genomics, NPPSFA, national project on protein STR and functional analyses; HET: FAD; 2.50A {Thermus thermophilus}
Probab=100.00 E-value=1.2e-36 Score=311.99 Aligned_cols=222 Identities=36% Similarity=0.625 Sum_probs=204.7
Q ss_pred CHHHHHHhhhHhhcCC-ceeEEecCCCCCCCcCCCeeEEEEeCCEEEEeeEEeeeeCCCCCcEEEEEEEecCCCCcccee
Q psy5138 2 TTEQKEKYLPRLAQTD-AGSFALSEPGSGSDAFAMKTTATKDGNHYILNGSKMWISNADIANIFLVMANVDVSKGYRGIT 80 (575)
Q Consensus 2 ~~~qk~~~l~~~~~g~-~~~~a~se~~~g~~~~~~~~~a~~~~~g~~l~G~k~~~t~~~~ad~~~v~a~~~~~~~~~~~~ 80 (575)
+++||++|||++.+|+ ++++++|||++|+|+..++|++++++|||+|||+|.|+||+..||+++|++++++ +++
T Consensus 101 ~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~~~~-----g~~ 175 (372)
T 2dvl_A 101 SEAQKRRYLVPLARGEWIGAFCLTEPQAGSDAKSLRAEARRVKGGFVLNGVKSWITSAGHAHLYVVMARTEK-----GIS 175 (372)
T ss_dssp CHHHHHHTHHHHHTTSSCEEEECCCSSCSSCGGGCCCEEEEETTEEEEEEEEEEEETTTTCSEEEEEEEETT-----EEE
T ss_pred CHHHHHHHHHHHhCCCeEEEEEecCCCCCCChhhCeeEEEEECCEEEEEeEEEeecCCCcCCEEEEEEEeCC-----CcE
Confidence 6889999999999999 6999999999999999999999999999999999999999999999999999752 688
Q ss_pred EEEEecCCCCeEEcccCcccCCCCCCceeEEeeeeEeCCCCcccCCCCcHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHH
Q psy5138 81 CFIVERSMEGFSVGKKENKLGMKASGTCSLHFDNVRVPEENIISGVGEGYKIAAGFLNQGRIGIAAQMTGLAQGCLDATI 160 (575)
Q Consensus 81 ~~~vp~~~~Gv~~~~~~~~~g~~~~~~~~v~f~~v~Vp~~~~l~~~~~g~~~~~~~~~~~~~~~~a~~~G~~~~a~~~a~ 160 (575)
+|+||.+.|||++.+.|+++|++++++++|.||||+||++++++.++.|+......+...|+.+++.++|+++++++.++
T Consensus 176 ~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~ 255 (372)
T 2dvl_A 176 AFLVEKGTPGLSFGRPEEKMGLHAAHTAEVRLEEVFVPEENLLGEEGRGLAYALAGLDSGRVGVAAQAVGIARGAFEIAK 255 (372)
T ss_dssp EEEEETTCTTEEECCCCCCSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCCeEecCcccccccCcCCeeEEEECcEEeCHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999888888999999999999999999999999
Q ss_pred HHhhhhcccCccccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHH
Q psy5138 161 PYTLERSQVGHRIFDFQACNGGSVQHQISQAVTQVECARLLTYNAARLLEAGQPFIKQASMAKYFASVAKLAKET 235 (575)
Q Consensus 161 ~~a~~r~~~g~~~~~~q~~~~~~vq~~la~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 235 (575)
+|+++|++||+|+.+||. +|+++++|.+.++++|++++++++.++.+.+...+..+.| ..+.+.+.+.
T Consensus 256 ~ya~~R~~fg~~i~~~q~-----vq~~la~~~~~~~aar~~~~~aa~~~~~g~~~~~~~~~aK--~~a~~~a~~~ 323 (372)
T 2dvl_A 256 AYAEEREQFGKKLKEHQA-----IAFKIADMHVKIAAARALVLEAARKKDRGERFTLEASAAK--LFASAAAVEV 323 (372)
T ss_dssp HHHHHCEETTEEGGGSHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHH--HHHHHHHHHH
T ss_pred HHHhhCcccCCchhhhHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHH--HHHHHHHHHH
Confidence 999999999999999998 9999999999999999999999999988766666666666 3344444443
No 52
>1r2j_A Protein FKBI; polyketide synthase, polyketide, acyl-COA dehydrogenase, , aldehyde dehydrogenase, oxidoreductase; HET: FAD; 2.10A {Streptomyces hygroscopicus} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=5.4e-37 Score=313.78 Aligned_cols=223 Identities=26% Similarity=0.396 Sum_probs=197.6
Q ss_pred CHHHHHHhhhHhhcCCceeEEecCCCCCCCcCCCeeEEEEeCCEEEEeeEEeeeeCCCCCcEEEEEEEecCCCCccceeE
Q psy5138 2 TTEQKEKYLPRLAQTDAGSFALSEPGSGSDAFAMKTTATKDGNHYILNGSKMWISNADIANIFLVMANVDVSKGYRGITC 81 (575)
Q Consensus 2 ~~~qk~~~l~~~~~g~~~~~a~se~~~g~~~~~~~~~a~~~~~g~~l~G~k~~~t~~~~ad~~~v~a~~~~~~~~~~~~~ 81 (575)
|++||++|||++.+|+++++++|||++|+|+..++|++++++|||+|||+|.|+||+..||+++|++++++ + ++++
T Consensus 90 ~~~q~~~~l~~~~~G~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~~~~--~--g~~~ 165 (366)
T 1r2j_A 90 DAGQRATFLKELTSGKLAAVGFSERQAGSDLSAMRTRVRLDGDTAVVDGHKVWTTAAAYADHLVVFGLQED--G--SGAV 165 (366)
T ss_dssp CHHHHHHHHHHTTCC-CEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEETTTTTCSEEEEEEBCSS--S--CCEE
T ss_pred CHHHHHHHHHHHhCCCeeEEEeCCCCCCCchhhCEeEEEEeCCEEEEEEEEecccCCcccCEEEEEEEeCC--C--ceEE
Confidence 68999999999999998899999999999999999999999999999999999999999999999998753 2 6889
Q ss_pred EEEecCCCCeEEcccCcccCCCCCCceeEEeeeeEeCCCCcccCCCCcHHHH-HHhhhHHHHHHHHHHHHHHHHHHHHHH
Q psy5138 82 FIVERSMEGFSVGKKENKLGMKASGTCSLHFDNVRVPEENIISGVGEGYKIA-AGFLNQGRIGIAAQMTGLAQGCLDATI 160 (575)
Q Consensus 82 ~~vp~~~~Gv~~~~~~~~~g~~~~~~~~v~f~~v~Vp~~~~l~~~~~g~~~~-~~~~~~~~~~~~a~~~G~~~~a~~~a~ 160 (575)
|+||.+.|||++.+.|+++|++++++++|.||||+||++++++.++.|+... ...+...|+.+++.++|+++++++.++
T Consensus 166 flV~~~~~Gv~~~~~~~~~G~r~~~~~~v~f~~v~Vp~~~~lg~~~~g~~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~ 245 (366)
T 1r2j_A 166 VVVPADTPGVRVERVPKPSGCRAAGHADLHLDQVRVPAGAVLAGSGASLPMLVAASLAYGRKSVAWGCVGILRACRTAAV 245 (366)
T ss_dssp EEEETTSTTEEEEECSSCSSSTTSCCEEEEEEEEEEEGGGBCTTTTSCTTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEECCCCCeEecCCcCCccCCCCCeeEEEEeeEEEcHHHcCCCCCccHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999888898877 778889999999999999999999999
Q ss_pred HHhhhhcccCccccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-CCchHHHHHHHHHHHHHHHHHHH
Q psy5138 161 PYTLERSQVGHRIFDFQACNGGSVQHQISQAVTQVECARLLTYNAARLLEAG-QPFIKQASMAKYFASVAKLAKET 235 (575)
Q Consensus 161 ~~a~~r~~~g~~~~~~q~~~~~~vq~~la~~~~~~~~~~~~~~~a~~~~~~~-~~~~~~~~~~~~~~~a~~~~~~~ 235 (575)
+|+++|++||+|+.+||. +|+++++|.++++++|++++++++.++.+ .+...+..+.| ..+.+.+.+.
T Consensus 246 ~ya~~R~~fg~~i~~~q~-----v~~~la~~~~~~~~ar~~~~~aa~~~~~g~~~~~~~~~~aK--~~a~~~a~~~ 314 (366)
T 1r2j_A 246 AHARTREQFGRPLGDHQL-----VAGHIADLWTAEQIAARVCEYASDHWDEGSPEMVPATILAK--HVAAERAAAG 314 (366)
T ss_dssp HHHTTCEETTEEGGGSHH-----HHHHHHHHHHHHHHHHHHHHHHHHC-------CHHHHHHHH--HHHHHHHHHH
T ss_pred HHHhcCccCCCchhhhHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCcchHHHHHHH--HHHHHHHHHH
Confidence 999999999999999998 99999999999999999999999999876 44555555555 3344444443
No 53
>3sf6_A Glutaryl-COA dehydrogenase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; HET: FDA; 1.70A {Mycobacterium smegmatis}
Probab=100.00 E-value=1.3e-36 Score=315.01 Aligned_cols=221 Identities=33% Similarity=0.558 Sum_probs=204.8
Q ss_pred CHHHHHHhhhHhhcCC-ceeEEecCCCCCCCcCCCeeEEEEeCCEEEEeeEEeeeeCCCCCcEEEEEEEecCCCCcccee
Q psy5138 2 TTEQKEKYLPRLAQTD-AGSFALSEPGSGSDAFAMKTTATKDGNHYILNGSKMWISNADIANIFLVMANVDVSKGYRGIT 80 (575)
Q Consensus 2 ~~~qk~~~l~~~~~g~-~~~~a~se~~~g~~~~~~~~~a~~~~~g~~l~G~k~~~t~~~~ad~~~v~a~~~~~~~~~~~~ 80 (575)
|++||++|||++.+|+ ++++++|||++|+|+..++|++++++|||+|||+|.|+||+..||+++|+++++ ++++
T Consensus 128 ~~~q~~~~l~~~~~G~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~is~a~~Ad~~~v~ar~~-----~g~~ 202 (403)
T 3sf6_A 128 SDEQKDQWLPDMASGHRIGCFGLTEPDHGSDPAGMRTRATRSGDDWILTGTKMWITNGSVADVAVVWARTD-----EGIR 202 (403)
T ss_dssp CHHHHHHHHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEEETGGGCSEEEEEEEET-----TEEE
T ss_pred CHHHHHHHHHHHhCCCceEEEEEccCCCCCCchhcEEEEEEECCEEEEEEEEEeecCCcccCEEEEEEEeC-----CceE
Confidence 6899999999999999 699999999999999999999999999999999999999999999999999975 3589
Q ss_pred EEEEecCCCCeEEcccCcccCCCCCCceeEEeeeeEeCCCCcccCCCCcHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHH
Q psy5138 81 CFIVERSMEGFSVGKKENKLGMKASGTCSLHFDNVRVPEENIISGVGEGYKIAAGFLNQGRIGIAAQMTGLAQGCLDATI 160 (575)
Q Consensus 81 ~~~vp~~~~Gv~~~~~~~~~g~~~~~~~~v~f~~v~Vp~~~~l~~~~~g~~~~~~~~~~~~~~~~a~~~G~~~~a~~~a~ 160 (575)
+|+||.+.|||++.+.|+++|++++++++|.||||+||++++++. +.|+......+...|+.+++.++|+++++++.++
T Consensus 203 ~flV~~~~pGv~v~~~~~~~G~r~~~~~~v~fd~v~Vp~~~~lg~-~~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~ 281 (403)
T 3sf6_A 203 GFVVPTDTPGFTANTIKSKMSLRASVTSELVLDGVRLPDSARLPG-ATSLGAPLRCLNEARFGIVFGALGAARDCLETAL 281 (403)
T ss_dssp EEEEETTSTTEEEEECCSCSSCTTSCEEEEEEEEEEEEGGGBCTT-CCSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEECCCCCeEecCCCCccCCCCCceeEEEEccEEEcHHHccCC-ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999987 8899999999999999999999999999999999
Q ss_pred HHhhhhcccCccccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHH
Q psy5138 161 PYTLERSQVGHRIFDFQACNGGSVQHQISQAVTQVECARLLTYNAARLLEAGQPFIKQASMAKYFASVAKLAKET 235 (575)
Q Consensus 161 ~~a~~r~~~g~~~~~~q~~~~~~vq~~la~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 235 (575)
+|+++|++||+|+.+||. +|+++++|.+.++++|++++++++.++.+.+...+..+.| ..+.+.+.+.
T Consensus 282 ~ya~~R~~fg~pi~~~q~-----vq~~la~~~~~~~aar~~~~~aa~~~d~~~~~~~~~~~aK--~~a~~~a~~v 349 (403)
T 3sf6_A 282 AYACSREQFDRPIGGFQL-----TQQKLADMTLEYGKGFLLALHLGRQKDAGELAPEQVSLGK--LNNVREAIEI 349 (403)
T ss_dssp HHHHHCEETTEEGGGSHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHH--HHHHHHHHHH
T ss_pred HHHhhCcccCCcchhhHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHH--HHHHHHHHHH
Confidence 999999999999999998 9999999999999999999999999998877666667766 3344444443
No 54
>4hr3_A Putative acyl-COA dehydrogenase; ssgcid, seattle structural genomics center for infectious DI niaid; HET: FAD; 1.80A {Mycobacterium abscessus}
Probab=100.00 E-value=1.6e-36 Score=315.70 Aligned_cols=227 Identities=28% Similarity=0.480 Sum_probs=205.4
Q ss_pred CHHHHHHhhhHhhcCC-ceeEEecCCC-CCCCcCCCeeEEEEeCCEEEEeeEEeeeeCCCC--CcEEEEEEEecCC-CCc
Q psy5138 2 TTEQKEKYLPRLAQTD-AGSFALSEPG-SGSDAFAMKTTATKDGNHYILNGSKMWISNADI--ANIFLVMANVDVS-KGY 76 (575)
Q Consensus 2 ~~~qk~~~l~~~~~g~-~~~~a~se~~-~g~~~~~~~~~a~~~~~g~~l~G~k~~~t~~~~--ad~~~v~a~~~~~-~~~ 76 (575)
|++||++|||++++|+ ++++++|||+ +|+|+..++|++++++|||+|||+|.|+||+.+ ||+++|+++++++ ++.
T Consensus 126 ~~~q~~~~l~~~~~G~~~~~~a~tEp~~~gsd~~~~~t~A~~~g~g~~lnG~K~~is~a~~~~Ad~~~v~a~~~~~~~~~ 205 (415)
T 4hr3_A 126 SQEQKEVWLEPLLEGDIRSAFCMTEPDVASSDATNMAATAVVEGDEVVINGRKWWSTGVGHPDCKVIIFMGLTDPNAHRY 205 (415)
T ss_dssp CHHHHHHTHHHHHTTSCEEEEECCCTTSCTTSGGGCCCEEEEETTEEEEEEEEEEEETTTSTTEEEEEEEEECCTTSCTT
T ss_pred CHHHHHHHHHHHhCCCceeEEEEcCCCCCCCchhhCeeEEEEECCEEEEeeEEeeECCCCCCCCCEEEEEEEeCCCCCCC
Confidence 6899999999999999 5999999999 999999999999999999999999999999966 9999999998643 334
Q ss_pred cceeEEEEecCCCCeEEcccCcccCCCCCC--ceeEEeeeeEeCCCCcccCCCCcHHHHHHhhhHHHHHHHHHHHHHHHH
Q psy5138 77 RGITCFIVERSMEGFSVGKKENKLGMKASG--TCSLHFDNVRVPEENIISGVGEGYKIAAGFLNQGRIGIAAQMTGLAQG 154 (575)
Q Consensus 77 ~~~~~~~vp~~~~Gv~~~~~~~~~g~~~~~--~~~v~f~~v~Vp~~~~l~~~~~g~~~~~~~~~~~~~~~~a~~~G~~~~ 154 (575)
.++++|+||.+.|||++.+.|+++|+++++ +++|.||||+||++++|+.++.|+......+...|+.+++.++|++++
T Consensus 206 ~g~~~flV~~~~pGv~v~~~~~~~g~r~~~~~~~~v~fddv~Vp~~~~lg~~~~g~~~~~~~l~~~r~~~aa~~~G~a~~ 285 (415)
T 4hr3_A 206 ARHSMVLVPMDTPGITVERMLPTMGFYDEPGGHGVVSFDNVRLPADAFIAGPGKGFEIAQGRLGPGRVHHAMRLIGLAEV 285 (415)
T ss_dssp SSEEEEEEETTSTTEEEEEECCBTTBCCTTTCEEEEEEEEEEEEGGGBSSCTTCHHHHHHHHCSHHHHHHHHHHHHHHHH
T ss_pred CceEEEEEEcCCCceEecCCCCccccCCCCCCeeEEEEccEEECHHHcCCCCCchHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 679999999999999999999999999887 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhcccCccccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCCchHHHHHHHHHHHHHHHH
Q psy5138 155 CLDATIPYTLERSQVGHRIFDFQACNGGSVQHQISQAVTQVECARLLTYNAARLLEA--GQPFIKQASMAKYFASVAKLA 232 (575)
Q Consensus 155 a~~~a~~~a~~r~~~g~~~~~~q~~~~~~vq~~la~~~~~~~~~~~~~~~a~~~~~~--~~~~~~~~~~~~~~~~a~~~~ 232 (575)
+++.+++|+++|++||+|+++||. +|+++++|.+.++++|++++++++.++. +.....+.++.| ..+.+.+
T Consensus 286 al~~a~~~a~~R~~fg~~i~~~q~-----vq~~la~~~~~~~aar~~~~~aa~~~d~~~~~~~~~~~~~aK--~~a~e~a 358 (415)
T 4hr3_A 286 ALEHACRRGLDRTAFGKPLVNLGG-----NRERIADARIAINQTRLLVLHAAWLLDTVGIMGALSAVSEIK--VAAPNMA 358 (415)
T ss_dssp HHHHHHHHHHHCEETTEEGGGSTT-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHTCGGGCHHHHHHHH--HHHHHHH
T ss_pred HHHHHHHHHhcCccCCCcHHHhHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHH--HHHHHHH
Confidence 999999999999999999999999 9999999999999999999999999987 444455556666 3344444
Q ss_pred HHH
Q psy5138 233 KET 235 (575)
Q Consensus 233 ~~~ 235 (575)
.+.
T Consensus 359 ~~v 361 (415)
T 4hr3_A 359 QQV 361 (415)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 55
>3swo_A Glutaryl-COA dehydrogenase; ssgcid, glutaryl-COA dehdrogenase, mycobacerium smegmatis, S genomics; HET: FDA; 1.45A {Mycobacterium smegmatis}
Probab=100.00 E-value=2.1e-36 Score=313.13 Aligned_cols=222 Identities=34% Similarity=0.542 Sum_probs=205.1
Q ss_pred CHHHHHHhhhHhhcCC-ceeEEecCCCCCCCcCCCeeEEEEeCCEEEEeeEEeeeeCCCCCcEEEEEEEecCCCCcccee
Q psy5138 2 TTEQKEKYLPRLAQTD-AGSFALSEPGSGSDAFAMKTTATKDGNHYILNGSKMWISNADIANIFLVMANVDVSKGYRGIT 80 (575)
Q Consensus 2 ~~~qk~~~l~~~~~g~-~~~~a~se~~~g~~~~~~~~~a~~~~~g~~l~G~k~~~t~~~~ad~~~v~a~~~~~~~~~~~~ 80 (575)
+++||++|||++.+|+ ++++++|||++|+|+..++|++++++|||+|||+|.|+||+..||+++|+++++ ++++
T Consensus 123 ~~~q~~~~l~~~~~G~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~vs~a~~Ad~~~v~a~~~-----~g~~ 197 (399)
T 3swo_A 123 SEEQKNEWLPRLAAGDAIGCFGLTEPDFGSNPAGMRTRARRDGSDWILNGTKMWITNGNLADVATVWAQTD-----DGIR 197 (399)
T ss_dssp CHHHHHHHHHHHHHTSSCEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEEETTTTCSEEEEEEBCT-----TSCE
T ss_pred CHHHHHHHHHHHhCCCeeeEEEecCCCCCCCCccceEEEEEeCCEEEEEEEEEeECCCCccCEEEEEEEeC-----CceE
Confidence 6899999999999999 699999999999999999999999999999999999999999999999999875 3488
Q ss_pred EEEEecCCCCeEEcccCcccCCCCCCceeEEeeeeEeCCCCcccCCCCcHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHH
Q psy5138 81 CFIVERSMEGFSVGKKENKLGMKASGTCSLHFDNVRVPEENIISGVGEGYKIAAGFLNQGRIGIAAQMTGLAQGCLDATI 160 (575)
Q Consensus 81 ~~~vp~~~~Gv~~~~~~~~~g~~~~~~~~v~f~~v~Vp~~~~l~~~~~g~~~~~~~~~~~~~~~~a~~~G~~~~a~~~a~ 160 (575)
+|+||.+.|||++.+.|+++|++++++++|.||||+||++++++. +.|+......+...|+.+++.++|+++++++.++
T Consensus 198 ~flV~~~~pGv~v~~~~~~~G~r~~~~~~v~fd~v~Vp~~~~lg~-~~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~ 276 (399)
T 3swo_A 198 GFLVPTDTPGFTANEIHRKLSLRASVTSELVLDNVRLPASAQLPL-AEGLSAPLSCLNEARFGIVFGALGAARDSLETTI 276 (399)
T ss_dssp EEEEETTSTTEEEEECCCBSSCCSSCEEEEEEEEEEECGGGBCTT-CCSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCCeEeecCcCcccCCCCceeEEEEccEEEcHHHcCCC-ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999988 8899989999999999999999999999999999
Q ss_pred HHhhhhcccCccccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHh
Q psy5138 161 PYTLERSQVGHRIFDFQACNGGSVQHQISQAVTQVECARLLTYNAARLLEAGQPFIKQASMAKYFASVAKLAKETI 236 (575)
Q Consensus 161 ~~a~~r~~~g~~~~~~q~~~~~~vq~~la~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 236 (575)
+|+++|++||+|+++||. +|+++++|.+.++++|++++++++.++.+.....+.++.| ..+.+.+.+..
T Consensus 277 ~~a~~R~~fG~~i~~~q~-----vq~~la~~~~~~~aar~~~~~aa~~~d~~~~~~~~~~~aK--~~a~~~a~~v~ 345 (399)
T 3swo_A 277 AYTQSREVFDKPLSNYQL-----TQEKLANMTVELGKGMLLAIHLGRIKDAEGVRPEQISLGK--LNNVREAIAIA 345 (399)
T ss_dssp HHHHHCEETTEEGGGSHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHH--HHHHHHHHHHH
T ss_pred HHHhcCeeCCcchhhCHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHH--HHHHHHHHHHH
Confidence 999999999999999998 9999999999999999999999999998876666777776 33444444443
No 56
>3ii9_A Glutaryl-COA dehydrogenase; slipchip, microfluidics, screening, optimization, protein crystallization, structural genomics; HET: PGE PG4; 1.74A {Burkholderia pseudomallei 1710B} PDB: 3eon_A* 3eom_A* 3gqt_A* 3gnc_A* 3d6b_A
Probab=100.00 E-value=1.8e-36 Score=313.30 Aligned_cols=226 Identities=35% Similarity=0.516 Sum_probs=200.5
Q ss_pred CHHHHHHhhhHhhcCC-ceeEEecCCCCCCCcCCCeeEEEEeCCEEEEeeEEeeeeCCCCCcEEEEEEEecCCCCcccee
Q psy5138 2 TTEQKEKYLPRLAQTD-AGSFALSEPGSGSDAFAMKTTATKDGNHYILNGSKMWISNADIANIFLVMANVDVSKGYRGIT 80 (575)
Q Consensus 2 ~~~qk~~~l~~~~~g~-~~~~a~se~~~g~~~~~~~~~a~~~~~g~~l~G~k~~~t~~~~ad~~~v~a~~~~~~~~~~~~ 80 (575)
|++||++|||++++|+ ++++++|||++|+|+..++|++++++|||+|||+|.|+||+..||+++|+++++ +++..+++
T Consensus 117 ~~~q~~~~l~~~~~G~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~vs~a~~Ad~~~v~a~~~-~~g~~g~~ 195 (396)
T 3ii9_A 117 SDAQKEKYLPKLATGEWIGCFGLTEPNHGSDPGSMVTRARKVPGGYSLSGSKMWITNSPIADVFVVWAKLD-EDGRDEIR 195 (396)
T ss_dssp CHHHHHHHHHHHHHTSSCEEEECCCCC------CCCCEEEEETTEEEEEEEEEEEETGGGCSEEEEEEEEE-ETTEEEEE
T ss_pred CHHHHHHHHHHHhCCCeeeEEEecCCCCCCChhhCeeEEEEeCCEEEEEEEEEeECCCccCCEEEEEEEec-CCCCCceE
Confidence 6899999999999999 699999999999999999999999999999999999999999999999999986 23345689
Q ss_pred EEEEecCCCCeEEcccCcccCCCCCCceeEEeeeeEeCCCCcccCCCCcHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHH
Q psy5138 81 CFIVERSMEGFSVGKKENKLGMKASGTCSLHFDNVRVPEENIISGVGEGYKIAAGFLNQGRIGIAAQMTGLAQGCLDATI 160 (575)
Q Consensus 81 ~~~vp~~~~Gv~~~~~~~~~g~~~~~~~~v~f~~v~Vp~~~~l~~~~~g~~~~~~~~~~~~~~~~a~~~G~~~~a~~~a~ 160 (575)
+|+||.+.|||++.+.|+++|++++++++|.||||+||++++++. +.|+......+...|+.+++.++|+++++++.++
T Consensus 196 ~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fddv~Vp~~~~l~~-~~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~ 274 (396)
T 3ii9_A 196 GFILEKGCKGLSAPAIHGKVGLRASITGEIVLDEAFVPEENILPH-VKGLRGPFTCLNSARYGIAWGALGAAESCWHIAR 274 (396)
T ss_dssp EEEEETTCTTEECCBCCCCSSCTTSCEEEEEEEEEEEEGGGBCTT-CCSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEecCCCCeEeccccccccCCcCCeeEEEEccEEECHHHccCC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999976 7899888888999999999999999999999999
Q ss_pred HHhhhhcccCccccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHh
Q psy5138 161 PYTLERSQVGHRIFDFQACNGGSVQHQISQAVTQVECARLLTYNAARLLEAGQPFIKQASMAKYFASVAKLAKETI 236 (575)
Q Consensus 161 ~~a~~r~~~g~~~~~~q~~~~~~vq~~la~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 236 (575)
+|+++|++||+|+++||. +|+++++|.+.++++|++++++++.++.+.....+.++.| ..+.+.+.+..
T Consensus 275 ~ya~~R~~fg~~i~~~q~-----vq~~la~~~~~~~aar~~~~~aa~~~d~~~~~~~~~~~aK--~~a~~~a~~~~ 343 (396)
T 3ii9_A 275 QYVLDRKQFGRPLAANQL-----IQKKLADMQTEITLGLQGVLRLGRMKDEGTAAVEITSIMK--RNSCGKALDIA 343 (396)
T ss_dssp HHHHHCEETTEEGGGSHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHH--HHHHHHHHHHH
T ss_pred HHHhhCeeCCCchhhhHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHH--HHHHHHHHHHH
Confidence 999999999999999998 9999999999999999999999999998877666667766 33444444433
No 57
>2z1q_A Acyl-COA dehydrogenase; FAD, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: FAD; 2.30A {Thermus thermophilus}
Probab=100.00 E-value=2.3e-34 Score=309.83 Aligned_cols=202 Identities=43% Similarity=0.697 Sum_probs=191.9
Q ss_pred CHHHHHHhhhHhhcCC-ceeEEecCCCCCCCcCCCeeEEEE--eCCEEEEeeEEeeeeCCCCCcEEEEEEEecCCCCccc
Q psy5138 2 TTEQKEKYLPRLAQTD-AGSFALSEPGSGSDAFAMKTTATK--DGNHYILNGSKMWISNADIANIFLVMANVDVSKGYRG 78 (575)
Q Consensus 2 ~~~qk~~~l~~~~~g~-~~~~a~se~~~g~~~~~~~~~a~~--~~~g~~l~G~k~~~t~~~~ad~~~v~a~~~~~~~~~~ 78 (575)
|++||++|||++++|+ ++|+++|||++|||+..+.|+|++ ++++|+|||+|.|+||+..||+++|++++++ .+
T Consensus 126 t~eQk~~~Lp~l~~G~~~~a~alTEp~aGSD~~~~~t~A~~~~dG~~~vLnG~K~~it~a~~Ad~~~V~Ar~~g----~g 201 (577)
T 2z1q_A 126 TEEQKRKYLPKLASGEWIAAYCLTEPGSGSDALAAKTRATLSEDGKHYILNGVKQWISNAGFAHLFTVFAKVDG----EH 201 (577)
T ss_dssp CHHHHHTTHHHHHHTSSCEEEECCBTTBSSSGGGCCCEEEECTTSSEEEEEEEEEEEETTTTCSEEEEEEEETT----TE
T ss_pred CHHHHHHHHHHHhCCCeEEEEEecCCCCCCCcccCeeEEEEeCCCCEEEEEEEeeCCCCCCccCEEEEEEEeCC----Ce
Confidence 6899999999999999 699999999999999999999998 4568999999999999999999999999862 46
Q ss_pred eeEEEEecCCCCeEEcccCcccCCCCCCceeEEeeeeEeCCCCcccCCCCcHHHHHHhhhHHHHHHHHHHHHHHHHHHHH
Q psy5138 79 ITCFIVERSMEGFSVGKKENKLGMKASGTCSLHFDNVRVPEENIISGVGEGYKIAAGFLNQGRIGIAAQMTGLAQGCLDA 158 (575)
Q Consensus 79 ~~~~~vp~~~~Gv~~~~~~~~~g~~~~~~~~v~f~~v~Vp~~~~l~~~~~g~~~~~~~~~~~~~~~~a~~~G~~~~a~~~ 158 (575)
+++|+||++.|||++.+.|+++|++++++++|.|+||+||.+++||..+.|+......+..+|+.+++.++|+++++++.
T Consensus 202 is~flVp~~~pGv~v~~~~~~~G~~~~~~~~v~fddv~VP~~~llg~~g~g~~~~~~~l~~~R~~~aa~~~G~a~~al~~ 281 (577)
T 2z1q_A 202 FTAFLVERDTPGLSFGPEEKKMGIKASSTRQVILEDVKVPVENVLGEIGKGHKIAFNVLNVGRYKLGAGAVGGAKRALEL 281 (577)
T ss_dssp EEEEEEETTCTTEEECCCCCBSSCTTSCEEEEEEEEEEEEGGGEESCTTCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEeCCCCCeEecCCCCCCCCCCCceeEEEecceeccHHHccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999899999999999999999999999
Q ss_pred HHHHhhhhcccCccccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q psy5138 159 TIPYTLERSQVGHRIFDFQACNGGSVQHQISQAVTQVECARLLTYNAARLLEAG 212 (575)
Q Consensus 159 a~~~a~~r~~~g~~~~~~q~~~~~~vq~~la~~~~~~~~~~~~~~~a~~~~~~~ 212 (575)
+++|+++|+|||+||++||. +|++|++|.+.+++++++++.++..++.+
T Consensus 282 a~~ya~~R~qfg~pi~~~q~-----vq~~La~~~~~~~aar~~~~~aa~~~d~~ 330 (577)
T 2z1q_A 282 SAQYATQRVQFGRPIGRFGL-----IQQKLGEMASRIYAAESAVYRTVGLIDEA 330 (577)
T ss_dssp HHHHHHHCBCSSSBGGGSHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCccCCCchhhhHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999998 99999999999999999999999988754
No 58
>2ix5_A Acyl-coenzyme A oxidase 4, peroxisomal; FAD, ACX4, flavin, peroxisome, glyoxysome, fatty acid metabo lipid metabolism, acyl-COA oxidase; HET: CAA FAD; 2.7A {Arabidopsis thaliana} PDB: 2ix6_A*
Probab=100.00 E-value=4.7e-36 Score=312.58 Aligned_cols=223 Identities=35% Similarity=0.526 Sum_probs=202.4
Q ss_pred CHHHHHHhhhHhhcCC-ceeEEecCCCCCCCcCCCeeEEEEeCCEEEEeeEEeeeeCCCCCcEEEEEEEecCCCCcccee
Q psy5138 2 TTEQKEKYLPRLAQTD-AGSFALSEPGSGSDAFAMKTTATKDGNHYILNGSKMWISNADIANIFLVMANVDVSKGYRGIT 80 (575)
Q Consensus 2 ~~~qk~~~l~~~~~g~-~~~~a~se~~~g~~~~~~~~~a~~~~~g~~l~G~k~~~t~~~~ad~~~v~a~~~~~~~~~~~~ 80 (575)
|++||++|||++.+|+ ++|+++|||++|+|+..++|++++++|||+|||+|.|+||+..||+++|+++++++ .+++
T Consensus 152 t~~qk~~~l~~l~~G~~~~a~a~tEp~~GSd~~~~~t~A~~~gdg~vLnG~K~~is~a~~Ad~~lv~Ar~~~~---~~~~ 228 (436)
T 2ix5_A 152 SEAQKEKYLPSLAQLNTVACWALTEPDNGSDASGLGTTATKVEGGWKINGQKRWIGNSTFADLLIIFARNTTT---NQIN 228 (436)
T ss_dssp CHHHHHHHHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEEETTTTCSEEEEEEEETTT---SSEE
T ss_pred CHHHHHHHHHHHhCCCeeeEEEecCCCCCCCcccceEEEEEeCCEEEEeeeccCCCCCcccCEEEEEEEECCC---CcEE
Confidence 6899999999999999 69999999999999999999999999999999999999999999999999998632 3588
Q ss_pred EEEEecCCCCeEEcccCcccCCCCCCceeEEeeeeEeCCCCcccCCCCcHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHH
Q psy5138 81 CFIVERSMEGFSVGKKENKLGMKASGTCSLHFDNVRVPEENIISGVGEGYKIAAGFLNQGRIGIAAQMTGLAQGCLDATI 160 (575)
Q Consensus 81 ~~~vp~~~~Gv~~~~~~~~~g~~~~~~~~v~f~~v~Vp~~~~l~~~~~g~~~~~~~~~~~~~~~~a~~~G~~~~a~~~a~ 160 (575)
+|+||.+.|||++.+.|+++|++++++++|.||||+||++++++.. .++......+...|+.+++.++|+++++++.++
T Consensus 229 ~flV~~~~pGv~v~~~~~~~G~r~~~~~~v~fddv~VP~~~~lg~~-~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~ 307 (436)
T 2ix5_A 229 GFIVKKDAPGLKATKIPNKIGLRMVQNGDILLQNVFVPDEDRLPGV-NSFQDTSKVLAVSRVMVAWQPIGISMGIYDMCH 307 (436)
T ss_dssp EEEEETTCTTEEEEECCCBSSSTTSCEEEEEEEEEEEEGGGBCTTC-SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEECCCCCeEeeccccccCCCcCCceeEEeccEEECHHHcCCcc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999865 678888888999999999999999999999999
Q ss_pred HHhhhhcccCccccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHH
Q psy5138 161 PYTLERSQVGHRIFDFQACNGGSVQHQISQAVTQVECARLLTYNAARLLEAGQPFIKQASMAKYFASVAKLAKET 235 (575)
Q Consensus 161 ~~a~~r~~~g~~~~~~q~~~~~~vq~~la~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 235 (575)
+|+++|+|||+|+++||. +|+++++|.+.++++|++++++++.++.+.....+.++.| ..+.+.+.+.
T Consensus 308 ~ya~~R~qfG~pi~~~q~-----vq~~la~~~~~~~aar~l~~~aa~~~d~g~~~~~~as~aK--~~a~e~a~~v 375 (436)
T 2ix5_A 308 RYLKERKQFGAPLAAFQL-----NQQKLVQMLGNVQAMFLMGWRLCKLYETGQMTPGQASLGK--AWISSKARET 375 (436)
T ss_dssp HHHHHCEETTEEGGGSHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHH--HHHHHHHHHH
T ss_pred HHHHhCeeCCcchhhcHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCchHHHHHHH--HHHHHHHHHH
Confidence 999999999999999998 9999999999999999999999999988765555666666 3344444443
No 59
>3mpi_A Glutaryl-COA dehydrogenase; alpha-beta fold, oxidoreductase; HET: FAD GRA; 2.05A {Desulfococcus multivorans} PDB: 3mpj_A*
Probab=100.00 E-value=2.3e-36 Score=312.83 Aligned_cols=226 Identities=42% Similarity=0.663 Sum_probs=206.1
Q ss_pred CHHHHHHhhhHhhcCC-ceeEEecCCCCCCCcCCCeeEEEEeCCEEEEeeEEeeeeCCCCCcEEEEEEEecCCCCcccee
Q psy5138 2 TTEQKEKYLPRLAQTD-AGSFALSEPGSGSDAFAMKTTATKDGNHYILNGSKMWISNADIANIFLVMANVDVSKGYRGIT 80 (575)
Q Consensus 2 ~~~qk~~~l~~~~~g~-~~~~a~se~~~g~~~~~~~~~a~~~~~g~~l~G~k~~~t~~~~ad~~~v~a~~~~~~~~~~~~ 80 (575)
|++||++|+|.+.+|+ ++++++|||++|+|+..+.+++++++|||+|||+|.|+||+..||+++|+++++++++..+++
T Consensus 106 ~~~q~~~~l~~~~~g~~~~~~a~tEp~~gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~~~~~~~~~g~~ 185 (397)
T 3mpi_A 106 SEALKKKYVPKLSSAEFLGGFGITEPDAGSDVMAMSSTAEDKGDHWLLNGSKTWISNAAQADVLIYYAYTDKAAGSRGLS 185 (397)
T ss_dssp CHHHHHHHHHHHHTTSSCCCEECCBTTBSSCGGGCCCEEEECSSEEEEEEEEEEEETTTTCSSEEEEEESCGGGGGGSEE
T ss_pred CHHHHHHHHHHHhCCCeEEEEEecCCCCCCCcccCeEEEEEeCCEEEEEEEEEeeCCCcccCEEEEEEEcCCCCCCCceE
Confidence 6899999999999999 599999999999999999999999999999999999999999999999999987544456789
Q ss_pred EEEE-ecCCCCeEEcccCcccCCCCCCceeEEeeeeEeCCCCcccCCCCcHHHHHHhhhHHHHHHHHHHHHHHHHHHHHH
Q psy5138 81 CFIV-ERSMEGFSVGKKENKLGMKASGTCSLHFDNVRVPEENIISGVGEGYKIAAGFLNQGRIGIAAQMTGLAQGCLDAT 159 (575)
Q Consensus 81 ~~~v-p~~~~Gv~~~~~~~~~g~~~~~~~~v~f~~v~Vp~~~~l~~~~~g~~~~~~~~~~~~~~~~a~~~G~~~~a~~~a 159 (575)
+|+| |.+.|||++ +.|+++|++++++++|.||||+||++++++.++.|+......+...++.+++.++|+++++++.+
T Consensus 186 ~flV~~~~~~Gv~v-~~~~~~G~~~~~~~~v~fddv~Vp~~~~lg~~~~g~~~~~~~~~~~r~~~aa~~lG~a~~al~~a 264 (397)
T 3mpi_A 186 AFVIEPRNFPGIKT-SNLEKLGSHASPTGELFLDNVKVPKENILGKPGDGARIVFGSLNHTRLSAAAGGVGLAQACLDAA 264 (397)
T ss_dssp EEEECTTTSTTEEE-EECCCSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEcCCCCCeEe-ccCccccCcCCceeEEEEeeEEECHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999 999999999 99999999999999999999999999999999999999888999999999999999999999999
Q ss_pred HHHhhhhcccCccccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-CCchHHHHHHHHHHHHHHHHHHH
Q psy5138 160 IPYTLERSQVGHRIFDFQACNGGSVQHQISQAVTQVECARLLTYNAARLLEAG-QPFIKQASMAKYFASVAKLAKET 235 (575)
Q Consensus 160 ~~~a~~r~~~g~~~~~~q~~~~~~vq~~la~~~~~~~~~~~~~~~a~~~~~~~-~~~~~~~~~~~~~~~a~~~~~~~ 235 (575)
++|+++|++||+|+.+||. +|+++++|.+.++++|++++++++.++.+ .....+..+.| ..+.+.+.+.
T Consensus 265 ~~~a~~R~~fg~~i~~~q~-----vq~~la~~~~~~~aar~~~~~aa~~~~~~~~~~~~~~~~aK--~~a~~~a~~~ 334 (397)
T 3mpi_A 265 IKYCNERRQFGKPIGDFQM-----NQDMIAQMAVEVEAARLLAYKAAAAKDEGRLNNGLDVAMAK--YAAGEAVSKC 334 (397)
T ss_dssp HHHHHHCEETTEEGGGSHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTEEHHHHHHHH--HHHHHHHHHH
T ss_pred HHHHhhCcccCCchhhhHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccHHHHHHHH--HHHHHHHHHH
Confidence 9999999999999999998 99999999999999999999999999887 55555556666 3344444443
No 60
>1rx0_A Acyl-COA dehydrogenase family member 8, mitochondrial; flavoprotein, coenzyme A, oxidoreductase; HET: FAD 2MC; 1.77A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=6.5e-36 Score=308.56 Aligned_cols=226 Identities=37% Similarity=0.534 Sum_probs=203.1
Q ss_pred CHHHHHHhhhHhhcCC-ceeEEecCCCCCCCcCCCeeEEEEeCCEEEEeeEEeeeeCCCCCcEEEEEEEecCCCCcccee
Q psy5138 2 TTEQKEKYLPRLAQTD-AGSFALSEPGSGSDAFAMKTTATKDGNHYILNGSKMWISNADIANIFLVMANVDVSKGYRGIT 80 (575)
Q Consensus 2 ~~~qk~~~l~~~~~g~-~~~~a~se~~~g~~~~~~~~~a~~~~~g~~l~G~k~~~t~~~~ad~~~v~a~~~~~~~~~~~~ 80 (575)
|++||++|+|++++|+ ++++++|||++|+|+..+.|++++++|||+|||+|.|+||+..||+++|++++++ +++.+++
T Consensus 116 ~~~qk~~~l~~~~~G~~~~~~a~tEp~~gsd~~~~~t~A~~~~~g~~lnG~K~~is~a~~Ad~~~v~a~~~~-~~~~g~~ 194 (393)
T 1rx0_A 116 NEEQRHKFCPPLCTMEKFASYCLTEPGSGSDAASLLTSAKKQGDHYILNGSKAFISGAGESDIYVVMCRTGG-PGPKGIS 194 (393)
T ss_dssp CHHHHHHHHHHHHTTSSCEEEECCBTTBSSSGGGCCCEEEEETTEEEEEEEEEEEETTTTCSEEEEEEESSS-SSGGGEE
T ss_pred CHHHHHHHHHHHhCCCceEEEEecCCCCCcCcccceeEEEEcCCEEEEEeEEEeecCCccCCEEEEEEEcCC-CCCCceE
Confidence 6899999999999999 6999999999999999999999999999999999999999999999999999763 3456789
Q ss_pred EEEEecCCCCeEEcccCcccCCCCCCceeEEeeeeEeCCCCcccCCCCcHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHH
Q psy5138 81 CFIVERSMEGFSVGKKENKLGMKASGTCSLHFDNVRVPEENIISGVGEGYKIAAGFLNQGRIGIAAQMTGLAQGCLDATI 160 (575)
Q Consensus 81 ~~~vp~~~~Gv~~~~~~~~~g~~~~~~~~v~f~~v~Vp~~~~l~~~~~g~~~~~~~~~~~~~~~~a~~~G~~~~a~~~a~ 160 (575)
+|+||.+.|||++.+.|+++|++++++++|.||||+||++++++.++.|+......+...|+.+++.++|+++++++.++
T Consensus 195 ~flV~~~~pGv~v~~~~~~~g~~~~~~~~v~fd~v~Vp~~~~lg~~g~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~ 274 (393)
T 1rx0_A 195 CIVVEKGTPGLSFGKKEKKVGWNSQPTRAVIFEDCAVPVANRIGSEGQGFLIAVRGLNGGRINIASCSLGAAHASVILTR 274 (393)
T ss_dssp EEEEETTCTTEEECCCCCBSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCCeEecCcccccccCCCCceEEEEcCeEeCHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999888999888888888999999999999999999999
Q ss_pred HHhhhhcccCccccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC-chHHHHHHHHHHHHHHHHHHH
Q psy5138 161 PYTLERSQVGHRIFDFQACNGGSVQHQISQAVTQVECARLLTYNAARLLEAGQP-FIKQASMAKYFASVAKLAKET 235 (575)
Q Consensus 161 ~~a~~r~~~g~~~~~~q~~~~~~vq~~la~~~~~~~~~~~~~~~a~~~~~~~~~-~~~~~~~~~~~~~a~~~~~~~ 235 (575)
+|+++|++||+|+++||. +|+++++|.+.++++|++++++++.++.+.. ...+.++.| ..+.+.+.+.
T Consensus 275 ~ya~~R~~fG~~i~~~q~-----vq~~la~~~~~~~aar~~~~~aa~~~d~~~~~~~~~~~~aK--~~a~~~a~~v 343 (393)
T 1rx0_A 275 DHLNVRKQFGEPLASNQY-----LQFTLADMATRLVAARLMVRNAAVALQEERKDAVALCSMAK--LFATDECFAI 343 (393)
T ss_dssp HHHHHCEETTEEGGGCHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHH--HHHHHHHHHH
T ss_pred HHHHhCccCCCchhhhHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhHHHHHHH--HHHHHHHHHH
Confidence 999999999999999998 9999999999999999999999999987642 234445555 3333444443
No 61
>2eba_A Putative glutaryl-COA dehydrogenase; thermus thermophilius, FAD, STRU genomics, NPPSFA; HET: FAD; 2.21A {Thermus thermophilus}
Probab=100.00 E-value=1.1e-35 Score=306.35 Aligned_cols=223 Identities=32% Similarity=0.511 Sum_probs=199.9
Q ss_pred CHHHHHHhhhHhhcCC-ceeEEecCCCCCCCc-CCCeeEEEEeCCEEEEeeEEeeeeCCCCCcEEEEEEEecCCCCccce
Q psy5138 2 TTEQKEKYLPRLAQTD-AGSFALSEPGSGSDA-FAMKTTATKDGNHYILNGSKMWISNADIANIFLVMANVDVSKGYRGI 79 (575)
Q Consensus 2 ~~~qk~~~l~~~~~g~-~~~~a~se~~~g~~~-~~~~~~a~~~~~g~~l~G~k~~~t~~~~ad~~~v~a~~~~~~~~~~~ 79 (575)
|++||++|||++.+|+ ++++++|||++|+|+ ..++|++++++|||+|||+|.|+||+..||+++|+++++ + + .+
T Consensus 109 ~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~~~-~-g--~~ 184 (385)
T 2eba_A 109 SEEQKREFLPKLARGEMVGCFGLTEPDGGSDPYGNMKTRARREGDTWVLNGTKMWITNGNLAHLAVIWAKDE-G-G--EV 184 (385)
T ss_dssp CHHHHHHHHHHHHTTSSCEEEECCCTTCTTSTTTTCCCEEEC--CEEEEEEEEEEEETTTTCSEEEEEEECC-------E
T ss_pred CHHHHHHHHHHHhCCCeEEEEEeCCCCcCCCccccCeeEEEEeCCEEEEEeeeeccCCCcccCEEEEEEEeC-C-C--cE
Confidence 6899999999999999 699999999999999 899999999999999999999999999999999999975 2 2 28
Q ss_pred eEEEEecCCCCeEEcccCcccCCCCCCceeEEeeeeEeCCCCcccCCCCcHHHHHHhhhHHHHHHHHHHHHHHHHHHHHH
Q psy5138 80 TCFIVERSMEGFSVGKKENKLGMKASGTCSLHFDNVRVPEENIISGVGEGYKIAAGFLNQGRIGIAAQMTGLAQGCLDAT 159 (575)
Q Consensus 80 ~~~~vp~~~~Gv~~~~~~~~~g~~~~~~~~v~f~~v~Vp~~~~l~~~~~g~~~~~~~~~~~~~~~~a~~~G~~~~a~~~a 159 (575)
++|+||.+.|||++.+.|+++|++++++++|.|+||+||+++++ ..++|+......+...|+.+++.++|+++++++.+
T Consensus 185 ~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~f~~v~Vp~~~~l-~~~~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a 263 (385)
T 2eba_A 185 LGFLVPTDTPGFQAREVKRKMSLRASVTSELVLEEVRVPESLRL-PKALGLKAPLSCLTQARFGIAWGAMGALEAVYEEA 263 (385)
T ss_dssp EEEEEETTSTTEEEEECCSBSSSCSSCEEEEEEEEEEEEGGGBC-TTCCSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEeCCCCCeEecccccccccccCceeEEEEccEEEcHHHcc-CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999 67889988888888999999999999999999999
Q ss_pred HHHhhhhcccCccccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHh
Q psy5138 160 IPYTLERSQVGHRIFDFQACNGGSVQHQISQAVTQVECARLLTYNAARLLEAGQPFIKQASMAKYFASVAKLAKETI 236 (575)
Q Consensus 160 ~~~a~~r~~~g~~~~~~q~~~~~~vq~~la~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 236 (575)
++|+++|++||+|+++||. +|+++++|.+.++++|++++++++.++.+.+...+.++.| ..+.+.+.+..
T Consensus 264 ~~ya~~R~~fg~~i~~~q~-----vq~~la~~~~~~~aar~~~~~aa~~~d~g~~~~~~~~~aK--~~a~~~a~~v~ 333 (385)
T 2eba_A 264 VAFAKSRSTFGEPLAKKQL-----VQAKLAEMLAWHTEGLLLAWRLARLKDEGKLTPAQVSLAK--RQNVWKALQAA 333 (385)
T ss_dssp HHHHHHCBSSSSBGGGSHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHH--HHHHHHHHHHH
T ss_pred HHHHhhCeeCCeeHHhCHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHH--HHHHHHHHHHH
Confidence 9999999999999999998 9999999999999999999999999988766555666666 33444444443
No 62
>2uxw_A VERY-long-chain specific acyl-COA dehydrogenase; fatty acid metabolism, transit peptide, disease mutation, LI metabolism, coenzyme A dehydrogenase; HET: FAD TH3; 1.45A {Homo sapiens} PDB: 3b96_A*
Probab=100.00 E-value=4.8e-35 Score=315.66 Aligned_cols=217 Identities=41% Similarity=0.716 Sum_probs=198.0
Q ss_pred CHHHHHHhhhHhhcCC-ceeEEecCCCCCCCcCCCeeEEEEe--CCEEEEeeEEeeeeCCCCCcEEEEEEEecCCC---C
Q psy5138 2 TTEQKEKYLPRLAQTD-AGSFALSEPGSGSDAFAMKTTATKD--GNHYILNGSKMWISNADIANIFLVMANVDVSK---G 75 (575)
Q Consensus 2 ~~~qk~~~l~~~~~g~-~~~~a~se~~~g~~~~~~~~~a~~~--~~g~~l~G~k~~~t~~~~ad~~~v~a~~~~~~---~ 75 (575)
|++||++|||++++|+ ++|+++|||++|||+..+.|+|+++ +++|+|||+|.|||++..||+++|+|++++.+ +
T Consensus 146 t~eqk~~~Lp~l~~G~~~~~~alTEp~aGSD~~~~~t~A~~~~dG~~y~LnG~K~~is~~~~Ad~~lV~Ar~~~~~~~~g 225 (607)
T 2uxw_A 146 TKAQKEKYLPKLASGETVAAFCLTEPSSGSDAASIRTSAVPSPCGKYYTLNGSKLWISNGGLADIFTVFAKTPVTDPATG 225 (607)
T ss_dssp CHHHHHHHHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEECTTSSEEEEEEEEEEEETTTTCSEEEEEEEEEEECTTTC
T ss_pred CHHHHHHHHHHHhCCCeEEEEEecCCCCCCCcccceeEEEEeCCCCEEEEEeEEEeecCCcccCEEEEEEEecCCCcccC
Confidence 6899999999999999 6999999999999999999999986 44899999999999999999999999985321 1
Q ss_pred --ccceeEEEEecCCCCeEEcccCcccCCCCCCceeEEeeeeEeCCCCcccCCCCcHHHHHHhhhHHHHHHHHHHHHHHH
Q psy5138 76 --YRGITCFIVERSMEGFSVGKKENKLGMKASGTCSLHFDNVRVPEENIISGVGEGYKIAAGFLNQGRIGIAAQMTGLAQ 153 (575)
Q Consensus 76 --~~~~~~~~vp~~~~Gv~~~~~~~~~g~~~~~~~~v~f~~v~Vp~~~~l~~~~~g~~~~~~~~~~~~~~~~a~~~G~~~ 153 (575)
..++++|+||++.|||++.+.|+++|++++++++|.|+||+||.+++||.++.|+......++..|+.+++.++|+++
T Consensus 226 ~~~~gis~flVp~~~~Gv~v~~~~~~~G~rg~~t~~v~fddv~VP~~~llG~~g~G~~~~~~~l~~~Rl~~aa~~~G~a~ 305 (607)
T 2uxw_A 226 AVKEKITAFVVERGFGGITHGPPEKKMGIKASNTAEVFFDGVRVPSENVLGEVGSGFKVAMHILNNGRFGMAAALAGTMR 305 (607)
T ss_dssp CEEEEEEEEEEEGGGSSEEECCCCCCSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCceEEEEEeCCCCCeEEecCccccCCCCCCeeEEEeccEEecHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 357899999999999999999999999999999999999999999999999999999888899999999999999999
Q ss_pred HHHHHHHHHhhhhcccCccccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC-CchHHHHHHH
Q psy5138 154 GCLDATIPYTLERSQVGHRIFDFQACNGGSVQHQISQAVTQVECARLLTYNAARLLEAGQ-PFIKQASMAK 223 (575)
Q Consensus 154 ~a~~~a~~~a~~r~~~g~~~~~~q~~~~~~vq~~la~~~~~~~~~~~~~~~a~~~~~~~~-~~~~~~~~~~ 223 (575)
++++.+++|+++|+|||+||++||. +|++|++|.+.+++++++++.+++.+|.+. +......+.|
T Consensus 306 ~al~~a~~ya~~R~qfG~pi~~~~~-----vq~~La~~~~~~eaaral~~~aa~~~d~~~~~~~~~~~~aK 371 (607)
T 2uxw_A 306 GIIAKAVDHATNRTQFGEKIHNFGL-----IQEKLARMVMLQYVTESMAYMVSANMDQGATDFQIEAAISK 371 (607)
T ss_dssp HHHHHHHHHHHHCEETTEEGGGSHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSCCHHHHHHHH
T ss_pred HHHHHHHHHHHhccccCCchhhcHH-----HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccHHHHHHHHH
Confidence 9999999999999999999999998 999999999999999999999999988753 2334444555
No 63
>2wbi_A Acyl-COA dehydrogenase family member 11; human, phosphoprotein, oxidoreducta; HET: FAD; 2.80A {Homo sapiens}
Probab=100.00 E-value=5e-36 Score=312.77 Aligned_cols=217 Identities=28% Similarity=0.481 Sum_probs=197.5
Q ss_pred CHHHHHHhhhHhhcCC-ceeEEecCCC-CCCCcCCCeeEEEEeCCEEEEeeEEeeeeCCCC--CcEEEEEEEecCC--CC
Q psy5138 2 TTEQKEKYLPRLAQTD-AGSFALSEPG-SGSDAFAMKTTATKDGNHYILNGSKMWISNADI--ANIFLVMANVDVS--KG 75 (575)
Q Consensus 2 ~~~qk~~~l~~~~~g~-~~~~a~se~~-~g~~~~~~~~~a~~~~~g~~l~G~k~~~t~~~~--ad~~~v~a~~~~~--~~ 75 (575)
|++||++|||++++|+ ++|+++|||+ +|+|+..+.|++++++|||+|||+|.|+||+.. ||+++|+++++++ ++
T Consensus 132 ~~~qk~~~l~~l~~G~~~~~~a~tEp~~aGsd~~~~~t~A~~~~~g~~lnG~K~~is~a~~~~Ad~~~v~art~~~~~~~ 211 (428)
T 2wbi_A 132 SEEQKKQWLEPLLQGNITSCFCMTEPDVASSDATNIECSIQRDEDSYVINGKKWWSSGAGNPKCKIAIVLGRTQNTSLSR 211 (428)
T ss_dssp CHHHHHHTHHHHHHTSSEEEEECCCTTSCTTSGGGCCCEEEEETTEEEEEEEEEEEETTTSTTEEEEEEEEECCCTTSCG
T ss_pred CHHHHHHHHHHHhCCCeEEEEEEecCCcCCCCcccceEEEEEeCCEEEEEeEEeccCCCCCCcCCEEEEEEEeCCccCCC
Confidence 6899999999999999 5999999999 999999999999999999999999999999988 9999999998643 23
Q ss_pred ccceeEEEEecCCCCeEEcccCcccCCCCCC---ceeEEeeeeEeCCCCcccCCCCcHHHHHHhhhHHHHHHHHHHHHHH
Q psy5138 76 YRGITCFIVERSMEGFSVGKKENKLGMKASG---TCSLHFDNVRVPEENIISGVGEGYKIAAGFLNQGRIGIAAQMTGLA 152 (575)
Q Consensus 76 ~~~~~~~~vp~~~~Gv~~~~~~~~~g~~~~~---~~~v~f~~v~Vp~~~~l~~~~~g~~~~~~~~~~~~~~~~a~~~G~~ 152 (575)
..++++|+||.+.|||++.+.|+++|+++++ +++|.||||+||++++|+.++.|+......+..+|+.+++.++|++
T Consensus 212 ~~g~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~~~~v~fddv~VP~~~~lg~~g~g~~~~~~~l~~~r~~~aa~~~G~a 291 (428)
T 2wbi_A 212 HKQHSMILVPMNTPGVKIIRPLSVFGYTDNFHGGHFEIHFNQVRVPATNLILGEGRGFEISQGRLGPGRIHHCMRTVGLA 291 (428)
T ss_dssp GGCEEEEEEETTSTTEEEEEECCBTTBCCGGGCCEEEEEEEEEEEEGGGBCSCTTCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCceEEEEEECCCCcEEecCCCCccccCCCCCCCeEEEEeCceEECHHHhcCCccchHHHHHHHHHhHHHHHHHHHHHHH
Confidence 4578999999999999999999999999984 9999999999999999999899999888888999999999999999
Q ss_pred HHHHHHHHHHhhhhcccCccccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhc-C-CCchHHHHHHH
Q psy5138 153 QGCLDATIPYTLERSQVGHRIFDFQACNGGSVQHQISQAVTQVECARLLTYNAARLLEA-G-QPFIKQASMAK 223 (575)
Q Consensus 153 ~~a~~~a~~~a~~r~~~g~~~~~~q~~~~~~vq~~la~~~~~~~~~~~~~~~a~~~~~~-~-~~~~~~~~~~~ 223 (575)
+++++.+++|+++|++||+|+.+||. +|+++++|.++++++|++++++++.++. + .....+.++.|
T Consensus 292 ~~al~~a~~ya~~R~~fG~~i~~~q~-----vq~~la~~~~~~~aar~~~~~aa~~~d~~g~~~~~~~~~~aK 359 (428)
T 2wbi_A 292 ERALQIMCERATQRIAFKKKLYAHEV-----VAHWIAESRIAIEKIRLLTLKAAHSMDTLGSAGAKKEIAMIK 359 (428)
T ss_dssp HHHHHHHHHHHHHCEETTEEGGGSHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHH
T ss_pred HHHHHHHHHHHhhCcccCCChhhhHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHH
Confidence 99999999999999999999999998 9999999999999999999999998876 2 22333444555
No 64
>2yyk_A 4-hydroxyphenylacetate-3-hydroxylase; structurome, riken spring-8 center, oxygnase component, 4- hydroxyphenylacetate 3-monooxygenase; 1.60A {Thermus thermophilus} PDB: 2yyl_A* 2yym_A* 2yyi_A* 2yyg_A* 2yyj_A*
Probab=100.00 E-value=5.6e-36 Score=313.78 Aligned_cols=290 Identities=17% Similarity=0.170 Sum_probs=227.1
Q ss_pred HHHHHhcccc-cCCCceeEEeecCCCCC--------CccccceeEEE-EeCCEEEEeeeeccccCCccccEEEEEEEeCC
Q psy5138 265 TEQKEKYLPR-LAQTDAGSFALSEPGSG--------SDAFAMKTTAT-KDGNHYILNGSKMWISNADIANIFLVMANVDV 334 (575)
Q Consensus 265 ~~~~~~~l~~-~~~~~~~~~~~te~~~g--------s~~~~~~~~a~-~~~~g~~l~G~k~~~s~~~~a~~~~v~a~~~~ 334 (575)
++|+++||++ ++|+.++++++|||..| ||+. ..++++ +++|||+|||+|.|+|| ..||+++|+++++.
T Consensus 123 ~eqk~~~L~~l~~Ge~~~a~a~TEP~~grs~~~s~gsd~~-~~~~~~~~~gdg~VlnG~K~~iT~-~~Ad~~iV~art~~ 200 (481)
T 2yyk_A 123 AENVRNYYRYLRDQDLATTHALTNPQVNRARPPSGQPDPY-IPVGVVKQTEKGIVVRGARMTATF-PLADEVLIFPSILL 200 (481)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEECCCCCCTTC----CCCSC-SBCEEEEECSSEEEEEEEEEEEEC-CCSSEEEECCCSCC
T ss_pred HHHHHHHHHHHHcCCeEEEEeeECCCCCCCCCccccCCcc-cceEEEEEECCEEEEEeEEEEecc-ccccEEEEEEecCC
Confidence 6899999999 89999999999999976 5553 456654 78999999999999999 99999999999864
Q ss_pred C-CCCCceEEEEEeCCCCCeeec--ccCcc--------CCCCC-ccceeEEEcceeeCCCCcc--cCCCchHHHH--HHH
Q psy5138 335 S-KGYRGITCFIVERSMEGFSVG--KKENK--------LGMKA-SGTCSLHFDNVRVPEENII--SGVGEGYKIA--AGF 398 (575)
Q Consensus 335 ~-~~~~~~~~~lv~~~~~gv~i~--~~~~~--------~G~rg-~~s~~l~f~~v~Vp~~~~l--~~~~~~~~~~--~~~ 398 (575)
. +...++++|+||+++|||++. +.+.. +|.+. .++++|.||||+||++++| |..+.++.+. ...
T Consensus 201 ~~~~~~~~s~flVp~dtpGv~v~~r~~~~~~~s~~d~~lg~r~~~~~~~v~FddV~VP~e~vl~~G~~~~g~~~~~~~~~ 280 (481)
T 2yyk_A 201 QAGSEKYALAFALPTSTPGLHFVCREALVGGDSPFDHPLSSRVEEMDCLVIFDDVLVPWERVFILGNVELCNNAYGATGA 280 (481)
T ss_dssp CTTCGGGCEEEEEETTCTTEEEEECCCCCCCSCTTTCTTTTTCCCCEEEEEEEEEEEEGGGEEEESCHHHHHHHHHHHTH
T ss_pred CCCCCCeEEEEEEECCCCCEEEEeccccccCCccccccccccCCCCeEEEEEccEEECHHHccCCCCccHHHHHHHHhhc
Confidence 3 223458999999999999995 34432 56664 6788999999999999998 5555555444 556
Q ss_pred HhhhHHHHHHHHHHHHHHHHHHHHHHhhhccccCccCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHc---CC--CcH
Q psy5138 399 LNQGRIGIAAQMTGLAQGCLDATIPYTLERSQFGHRIFDFQSVQHQISQAATQVECARLLTYNAARLLEA---GQ--PFI 473 (575)
Q Consensus 399 ~~~~r~~~~a~~~G~~~~al~~~~~~~~~r~~~g~~l~~~~~~~~~la~~~~~~~aar~~~~~a~~~~~~---~~--~~~ 473 (575)
+...|+..++..+|.++.+++.+..++.. + +|+++|.+|++||+|.++++++|++++++++..+. +. +..
T Consensus 281 l~~~r~~~~~~~~g~a~~~lg~a~~~~~~---~--gi~~~q~vq~~laem~~~leaar~l~~~aa~~~d~~~~G~~~~~~ 355 (481)
T 2yyk_A 281 LNHMAHQVVALKTAKTEAFLGVAALMAEG---I--GADVYGHVQEKIAEIIVYLEAMRAFWTRAEEEAKENAYGLLVPDR 355 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH---T--TGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHTCEECTTSCEECCH
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHh---c--ChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccCCcCccH
Confidence 78899999999999999999999888775 3 38999999999999999999999999999999864 32 446
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcCCcchhhhhhhhcccccccccccccccccccCCC--hHHHHhhhhccc
Q psy5138 474 KQASMAKYFASEMAGHITRQCIDWMGGLGFTKDYPQEKFYRDCKMAGHITRQCIDWMGGLGFTKDY--PQEKYYRDCKVG 551 (575)
Q Consensus 474 ~~~~~ak~~~~~~~~~~~~~~~~~~G~~~~~~~~p~~R~~RD~~~~~~~~~~~~~~~Gg~g~~~~~--~~~~~~rd~~~~ 551 (575)
..++++|+++++.+.++++.++|++||.++. .|++|+| |.........-. .|. |....+ .+.|+..|+...
T Consensus 356 ~~~s~aK~~a~e~a~~v~~~a~qi~Gg~g~~--~p~e~~~-~~~i~~~l~~~l---~~~-g~~~~~r~~i~rl~~~~~~~ 428 (481)
T 2yyk_A 356 GALDGARNLYPRLYPRIREILEQIGASGLIT--LPSEKDF-KGPLGPFLEKFL---QGA-ALEAKERVALFRLAWDMTLS 428 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHGGGGSC--CCCHHHH-HSTTHHHHHHHS---CBT-TBCHHHHHHHHHHHHHTTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCccccc--CccHHHh-ChhhhHHHHHHH---hcC-CCCHHHHHHHHHHHHHHhcC
Confidence 6899999999999999999999999997776 8999999 885433111110 122 333322 244455554332
Q ss_pred ----------eeccchHHHHHHHHHHH
Q psy5138 552 ----------TIYEGTSNIQLSTIAKY 568 (575)
Q Consensus 552 ----------~~~~G~~~~~~~~i~~~ 568 (575)
..+.|++..++..+-+.
T Consensus 429 ~~~~r~~~~~~~~~G~p~~~~~~~~~~ 455 (481)
T 2yyk_A 429 GFGARQELYERFFFGDPVRMYQTLYNV 455 (481)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred cccchhheeeeecCCCHHHHHHHHHHh
Confidence 24568888887766654
No 65
>1u8v_A Gamma-aminobutyrate metabolism dehydratase/isomerase; ALFA-helixes, beta-strands, lyase; HET: FAD; 1.60A {Clostridium aminobutyricum} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=6.5e-36 Score=313.64 Aligned_cols=247 Identities=16% Similarity=0.161 Sum_probs=206.4
Q ss_pred CCC--HHHHHhcccc-cCCCceeEEeecCCCCC--------Ccc-ccceeEEEEeCCEEEEeeeeccccCCccccEEEEE
Q psy5138 262 LGT--TEQKEKYLPR-LAQTDAGSFALSEPGSG--------SDA-FAMKTTATKDGNHYILNGSKMWISNADIANIFLVM 329 (575)
Q Consensus 262 ~g~--~~~~~~~l~~-~~~~~~~~~~~te~~~g--------s~~-~~~~~~a~~~~~g~~l~G~k~~~s~~~~a~~~~v~ 329 (575)
+|+ ++|+++||++ ++|+.++|+++|||..+ ||+ .... ++++++|||+|||+|.|+||+..||+++|+
T Consensus 123 ~Gt~~~eqk~~~L~~l~~Ge~~~a~a~TEP~~~rs~~~~~gSD~~~~~~-~a~r~gdg~vlnG~K~~iT~a~~Ad~~iV~ 201 (490)
T 1u8v_A 123 YGTNYHKNFTEYLKYIQENDLIVDGAMTDPKGDRGLAPSAQKDPDLFLR-IVEKREDGIVVRGAKAHQTGSINSHEHIIM 201 (490)
T ss_dssp HCCCHHHHHHHHHHHHHHHTCCEEEECCCCCSCTTSCGGGCSSTTSSCE-EEEECSSEEEEEEEECSCTTCTTCSEEEEC
T ss_pred hCCCHHHHHHHHHHHHHhCCceeeeeeeCCCCCCcccccccCCcccceE-EEEEECCEEEEEeEEEEeeCCcccCEEEEE
Confidence 468 8999999999 89999999999999864 664 3344 888999999999999999999999999999
Q ss_pred EEeCCC-CCCCceEEEEEeCCCCCeeec---ccCcc----------CCC-CC-ccceeEEEcceeeCCCCcc--cCCCch
Q psy5138 330 ANVDVS-KGYRGITCFIVERSMEGFSVG---KKENK----------LGM-KA-SGTCSLHFDNVRVPEENII--SGVGEG 391 (575)
Q Consensus 330 a~~~~~-~~~~~~~~~lv~~~~~gv~i~---~~~~~----------~G~-rg-~~s~~l~f~~v~Vp~~~~l--~~~~~~ 391 (575)
++++.+ +...+.++|+||+++|||++. +.+.. +|+ |. .++++|.||||+||++++| |..+.+
T Consensus 202 art~~~~~~~~~~s~flVp~d~pGv~v~~~r~~~~~~~~~~~~d~~lg~~r~~~~~~~v~FddV~VP~e~vl~~g~~~~g 281 (490)
T 1u8v_A 202 PTIAMTEADKDYAVSFACPSDADGLFMIYGRQSCDTRKMEEGADIDLGNKQFGGQEALVVFDNVFIPNDRIFLCQEYDFA 281 (490)
T ss_dssp CSSCCCGGGGGGCEEEEEETTCTTEEEEECCCTTGGGGGSTTCCGGGSSSSCCCCCEEEEEEEEEEEGGGEEEESCGGGH
T ss_pred EecCCCCCCCCeEEEEEEECCCCCEEEEecccccccccccccccCCccccccCCceEEEEECceEeCHHHccCCCChhHH
Confidence 998632 223357899999999999995 34543 666 64 6678899999999999998 677778
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhhhccccCccCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHc---
Q psy5138 392 YKIAAGFLNQGRIGIAAQMTGLAQGCLDATIPYTLERSQFGHRIFDFQSVQHQISQAATQVECARLLTYNAARLLEA--- 468 (575)
Q Consensus 392 ~~~~~~~~~~~r~~~~a~~~G~~~~al~~~~~~~~~r~~~g~~l~~~~~~~~~la~~~~~~~aar~~~~~a~~~~~~--- 468 (575)
+.+....+...|+.++++++|.++.++..+...... + +++++|.+|++|++|.++++++|++++++++..+.
T Consensus 282 ~~~~~~~~~~~r~~~~a~~~~~~~~~lG~a~~~~~~---~--gi~~~q~vq~~laem~~~leaar~l~~~aa~~~d~~~~ 356 (490)
T 1u8v_A 282 GMMVERFAGYHRQSYGGCKVGVGDVVIGAAALAADY---N--GAQKASHVKDKLIEMTHLNETLYCCGIACSAEGYPTAA 356 (490)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---H--TCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHTCEECTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---c--CchhcHHHHHHHHHHHHHHHHHHHHHHHHHHccccccc
Confidence 877777777888888777666666666665543332 3 38999999999999999999999999999999864
Q ss_pred CC--CcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcCCcchhhhhhh
Q psy5138 469 GQ--PFIKQASMAKYFASEMAGHITRQCIDWMGGLGFTKDYPQEKFYRDC 516 (575)
Q Consensus 469 ~~--~~~~~~~~ak~~~~~~~~~~~~~~~~~~G~~~~~~~~p~~R~~RD~ 516 (575)
+. +....++++|+++++.+.++++.++|++||.++. .|++|+|||.
T Consensus 357 g~~~~~~~~~s~aK~~a~e~a~~v~~~a~qi~Gg~g~~--~p~er~~rd~ 404 (490)
T 1u8v_A 357 GNYQIDLLLANVCKQNITRFPYEIVRLAEDIAGGLMVT--MPSEADFKSE 404 (490)
T ss_dssp SCEECCHHHHHHHHHHHTTHHHHHHHHHHHHHCTHHHH--CCCHHHHTCC
T ss_pred CCcCccHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhc--ChHHHHHhCc
Confidence 32 4466899999999999999999999999999887 8999999998
No 66
>1siq_A GCD, glutaryl-COA dehydrogenase; acyl-COA dehydrogenase, decarboxylation, flavin protein, oxidoreductase; HET: FAD; 2.10A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1 PDB: 2r0n_A* 1sir_A* 2r0m_A*
Probab=100.00 E-value=5.5e-35 Score=301.87 Aligned_cols=222 Identities=33% Similarity=0.536 Sum_probs=199.9
Q ss_pred CHHHHHHhhhHhhcCC-ceeEEecCCCCCCCcCCCeeEEEEe--CCEEEEeeEEeeeeCCCCCcEEEEEEEecCCCCccc
Q psy5138 2 TTEQKEKYLPRLAQTD-AGSFALSEPGSGSDAFAMKTTATKD--GNHYILNGSKMWISNADIANIFLVMANVDVSKGYRG 78 (575)
Q Consensus 2 ~~~qk~~~l~~~~~g~-~~~~a~se~~~g~~~~~~~~~a~~~--~~g~~l~G~k~~~t~~~~ad~~~v~a~~~~~~~~~~ 78 (575)
|++||++|+|++++|+ ++++++|||++|+|+..++|+++++ +|||+|||+|.|+||+..||+++|++++++ .+
T Consensus 111 ~~~q~~~~l~~l~~g~~~~~~a~tEp~~gsd~~~~~t~A~~~~~~~g~~lnG~K~~vs~~~~Ad~~~v~a~~~~----g~ 186 (392)
T 1siq_A 111 SEEQRQKYLPQLAKGELLGCFGLTEPNSGSDPSSMETRAHYNSSNKSYTLNGTKTWITNSPMADLFVVWARCED----GC 186 (392)
T ss_dssp CHHHHHHHHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEEETTTTEEEEEEEEEEEETGGGCSEEEEEEEETT----SC
T ss_pred CHHHHHHHHHHHhCCCeEEEEEECCCCCCcCccccEEEEEEeCCCCEEEEEEEEEeecCCcccCEEEEEEEECC----CC
Confidence 6899999999999999 6999999999999999999999999 999999999999999999999999999852 24
Q ss_pred eeEEEEecCCCCeEEcccCcccCCCCCCceeEEeeeeEeCCCCcccCCCCcHHHHHHhhhHHHHHHHHHHHHHHHHHHHH
Q psy5138 79 ITCFIVERSMEGFSVGKKENKLGMKASGTCSLHFDNVRVPEENIISGVGEGYKIAAGFLNQGRIGIAAQMTGLAQGCLDA 158 (575)
Q Consensus 79 ~~~~~vp~~~~Gv~~~~~~~~~g~~~~~~~~v~f~~v~Vp~~~~l~~~~~g~~~~~~~~~~~~~~~~a~~~G~~~~a~~~ 158 (575)
+++|+||.+.|||++.+.|+++|++++++++|.||||+||++++++.. .|+......+...|+.+++.++|+++++++.
T Consensus 187 ~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~-~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~ 265 (392)
T 1siq_A 187 IRGFLLEKGMRGLSAPRIQGKFSLRASATGMIIMDGVEVPEENVLPGA-SSLGGPFGCLNNARYGIAWGVLGASEFCLHT 265 (392)
T ss_dssp EEEEEEETTCTTEECCBCCCCSSSTTSCEEEEEEEEEEEEGGGBCTTC-CSSHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEeCCCCCeEeccccccccccCCceEEEEEccEEECHHHcCCcc-cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 789999999999999999999999999999999999999999999765 5787777778889999999999999999999
Q ss_pred HHHHhhhhcccCccccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHH
Q psy5138 159 TIPYTLERSQVGHRIFDFQACNGGSVQHQISQAVTQVECARLLTYNAARLLEAGQPFIKQASMAKYFASVAKLAKET 235 (575)
Q Consensus 159 a~~~a~~r~~~g~~~~~~q~~~~~~vq~~la~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 235 (575)
+++|+++|+|||+|+++||. +|+++++|.+.+++++++++++++.++.+.......++.| ..+.+.+.+.
T Consensus 266 a~~ya~~R~~fG~~i~~~q~-----vq~~la~~~~~~~~ar~~~~~aa~~~d~~~~~~~~~~~aK--~~~~~~a~~v 335 (392)
T 1siq_A 266 ARQYALDRMQFGVPLARNQL-----IQKKLADMLTEITLGLHACLQLGRLKDQDKAAPEMVSLLK--RNNCGKALDI 335 (392)
T ss_dssp HHHHHHHCEETTEEGGGSHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHH--HHHHHHHHHH
T ss_pred HHHHHhcCeeCCcchhhhHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchHHHHHHH--HHHHHHHHHH
Confidence 99999999999999999998 9999999999999999999999999988765555556666 3333444443
No 67
>3mkh_A Nitroalkane oxidase; oxidoreductase flavoenzyme, acyl-COA dehydrogen flavoprotein, oxidoreductase; HET: FAD; 2.00A {Podospora anserina}
Probab=100.00 E-value=1.2e-33 Score=296.29 Aligned_cols=207 Identities=27% Similarity=0.443 Sum_probs=191.0
Q ss_pred CHHHHHHhhhHhhcC--C-ceeEEecCCCCCC-----CcCCCeeEEEEeCCEEEEeeEEeeeeCCC-----CCcEEEEEE
Q psy5138 2 TTEQKEKYLPRLAQT--D-AGSFALSEPGSGS-----DAFAMKTTATKDGNHYILNGSKMWISNAD-----IANIFLVMA 68 (575)
Q Consensus 2 ~~~qk~~~l~~~~~g--~-~~~~a~se~~~g~-----~~~~~~~~a~~~~~g~~l~G~k~~~t~~~-----~ad~~~v~a 68 (575)
|++ |++|||++++| + ++|+++|||++|+ |+..++|+|++++|||+|||+|.|+||+. .||+++|++
T Consensus 111 ~~~-~~~~l~~~~~G~g~~~~~~a~tEp~~gs~~~~sd~~~~~t~A~~~g~g~~lnG~K~~is~a~~~~~~~Ad~~~v~a 189 (438)
T 3mkh_A 111 GPQ-HAEFLAPFLSGEGSPLASLVFSEPGGVANALEKGAPGFQTTARLEGDEWVINGEKMWATNCAGWDFKGCDLACVVC 189 (438)
T ss_dssp CGG-GHHHHGGGSSSCSCCCEEEECCCTTCCTTTTCTTSCCCSCEEEEETTEEEEEEEECSCTTTTCTTSSCCSEEEEEE
T ss_pred CHH-HHHHHHHHhcCCCCceEEEEEccCCCCCCccccccccceeEEEEeCCEEEEEeEEEEecCCCccccccCcEEEEEE
Confidence 567 88999999996 4 6999999999988 57889999999999999999999999997 899999999
Q ss_pred EecC------CCCccceeEEEEecCC-----CC-eEEcccCcccCCCCCCceeEEeeeeEeCCCCcccCCCCcHHHHHHh
Q psy5138 69 NVDV------SKGYRGITCFIVERSM-----EG-FSVGKKENKLGMKASGTCSLHFDNVRVPEENIISGVGEGYKIAAGF 136 (575)
Q Consensus 69 ~~~~------~~~~~~~~~~~vp~~~-----~G-v~~~~~~~~~g~~~~~~~~v~f~~v~Vp~~~~l~~~~~g~~~~~~~ 136 (575)
+++. .++..++++|+||.+. || |++.+.|+++|++++++++|.||||+||++++|+.++.|+......
T Consensus 190 ~~~~~~~~~~~~~~~g~~~flV~~~~~~~~~pG~v~v~~~~~~~G~r~~~~~~v~fddv~VP~~~~lg~~~~g~~~~~~~ 269 (438)
T 3mkh_A 190 RDATTPLEEGQDPENKVMIILVTRADLDRNGEGSFEVLRHVATPGHTSVSGPHVRYTNVRVPTKNVLCPAGQGAKVAFGA 269 (438)
T ss_dssp EECSSCCCTTCCGGGGEEEEEEEHHHHHHHCTTSEEEEECCCCSSCTTCCCCEEEEEEEEEEGGGEEECTTTHHHHHHHH
T ss_pred EecCcccCcccCCCCceEEEEEecCccccCCCCcEEecCcCCCcCCcCCCceEEEECcEEECHHHcCCCCCchHHHHHHH
Confidence 9853 1223578999999875 88 9999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccC-ccccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q psy5138 137 LNQGRIGIAAQMTGLAQGCLDATIPYTLERSQVG-HRIFDFQACNGGSVQHQISQAVTQVECARLLTYNAARLLEAGQP 214 (575)
Q Consensus 137 ~~~~~~~~~a~~~G~~~~a~~~a~~~a~~r~~~g-~~~~~~q~~~~~~vq~~la~~~~~~~~~~~~~~~a~~~~~~~~~ 214 (575)
+..+|+.+++.++|+++++++.+++|+++|++|| +|+++||. +|++|++|.++++++|++++++++.++.+..
T Consensus 270 l~~~r~~~aa~~lG~a~~al~~a~~ya~~R~~~g~~pi~~~q~-----vq~~la~~~~~~~aar~~~~~aa~~~d~~~~ 343 (438)
T 3mkh_A 270 FDGSAVLVGAMGVGLMRAAFDAALKFAKEDNRGGAVPLLERQA-----FADLLSGVKIQTEAARALTWKAAHAMENGPG 343 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCSSCGGGSHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcEeCCCeeccccHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999999999999999 99999998 9999999999999999999999999988754
No 68
>2c12_A Nitroalkane oxidase; oxidoreductase, flavoenzyme, acyl-COA dehydrogenase, long cell EDGE, FAD, inhibitor, flavoprotein; HET: SPM FAD PE4; 2.07A {Fusarium oxysporum} SCOP: a.29.3.1 e.6.1.1 PDB: 2c0u_A* 2zaf_A* 2reh_A* 3d9g_A* 3d9f_A* 3d9d_A* 3d9e_A* 3fcj_A*
Probab=100.00 E-value=1.7e-33 Score=295.03 Aligned_cols=208 Identities=22% Similarity=0.348 Sum_probs=191.2
Q ss_pred CHHHHHHhhhHhh--cCC-ceeEEecCCCCCC-----CcCCCeeEEEEeCCEEEEeeEEeeeeCCC-----CCcEEEEEE
Q psy5138 2 TTEQKEKYLPRLA--QTD-AGSFALSEPGSGS-----DAFAMKTTATKDGNHYILNGSKMWISNAD-----IANIFLVMA 68 (575)
Q Consensus 2 ~~~qk~~~l~~~~--~g~-~~~~a~se~~~g~-----~~~~~~~~a~~~~~g~~l~G~k~~~t~~~-----~ad~~~v~a 68 (575)
|++||++|||+++ +|+ ++|+++|||++|+ |+..++|++++++|||+|||+|.|+||+. .||+++|++
T Consensus 109 ~~~q~~~~l~~~~~~~G~~~~~~a~tEp~~Gs~~~~sd~~~~~t~A~~~~~g~~lnG~K~~is~~~~~~~~~Ad~~~v~a 188 (439)
T 2c12_A 109 SPSLQEKFLKPFISGEGEPLASLMHSEPNGTANWLQKGGPGLQTTARKVGNEWVISGEKLWPSNSGGWDYKGADLACVVC 188 (439)
T ss_dssp CHHHHHHHTGGGGSSCSCCCEEEECCCTTCSTTTTCTTSCCCSCEEEEETTEEEEEEEEECCTTTTTTTSSCCSEEEEEE
T ss_pred CHHHHHHHHHHHhhcCCCEEEEEEecCCCCCCCccccccccceeEEEEcCCEEEEEeEEEeecCCCccccccCcEEEEEE
Confidence 6899999999999 688 6999999999887 57778999999999999999999999997 999999999
Q ss_pred Ee-c----CC----CCccceeEEEEecCCC------CeEEcccCcccCCCCCCceeEEeeeeEeCCCCcccCCCCcHH-H
Q psy5138 69 NV-D----VS----KGYRGITCFIVERSME------GFSVGKKENKLGMKASGTCSLHFDNVRVPEENIISGVGEGYK-I 132 (575)
Q Consensus 69 ~~-~----~~----~~~~~~~~~~vp~~~~------Gv~~~~~~~~~g~~~~~~~~v~f~~v~Vp~~~~l~~~~~g~~-~ 132 (575)
++ + ++ ++..++++|+||.+.| ||++.+.|+++|++++++++|.||||+||++++|+.++.|+. +
T Consensus 189 r~~~~~~~~~~~~~~~~~g~~~flV~~~~pGv~~~~Gv~v~~~~~~~G~r~~~~~~v~fddv~VP~~~~lg~~~~g~~~~ 268 (439)
T 2c12_A 189 RVSDDPSKPQDPNVDPATQIAVLLVTRETIANNKKDAYQILGEPELAGHITTSGPHTRFTEFHVPHENLLCTPGLKAQGL 268 (439)
T ss_dssp EECSCTTSCCCTTSCGGGGEEEEEECHHHHHTSCGGGEEEEECCCBSSCTTCCCCEEEEEEEEEEGGGBCSCTTHHHHHH
T ss_pred EcCCcccCccccccCCCCceEEEEEECCCCcccCCCceEeCCcccccccCCCCceEEEEccEEecHHHcCCCCCccHHHH
Confidence 98 5 22 2345789999999998 888999999999999999999999999999999998888998 8
Q ss_pred HHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhhh-hcccCccccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy5138 133 AAGFLNQGRIGIAAQMTGLAQGCLDATIPYTLE-RSQVGHRIFDFQACNGGSVQHQISQAVTQVECARLLTYNAARLLEA 211 (575)
Q Consensus 133 ~~~~~~~~~~~~~a~~~G~~~~a~~~a~~~a~~-r~~~g~~~~~~q~~~~~~vq~~la~~~~~~~~~~~~~~~a~~~~~~ 211 (575)
....+...|+.+++.++|+++++++.+++|+++ |.+||+|+.+||. +|++|++|.+.++++|++++++++.++.
T Consensus 269 ~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~rr~~~G~~i~~~q~-----vq~~la~~~~~~~aar~~~~~aa~~~~~ 343 (439)
T 2c12_A 269 VETAFAMSAALVGAMAIGTARAAFEEALVFAKSDTRGGSKHIIEHQS-----VADKLIDCKIRLETSRLLVWKAVTTLED 343 (439)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTSSSCGGGSHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhceeeCCeehhccHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 888899999999999999999999999999996 7889999999998 9999999999999999999999999987
Q ss_pred CCC
Q psy5138 212 GQP 214 (575)
Q Consensus 212 ~~~ 214 (575)
+..
T Consensus 344 ~~~ 346 (439)
T 2c12_A 344 EAL 346 (439)
T ss_dssp TTS
T ss_pred CCc
Confidence 654
No 69
>3djl_A Protein AIDB; alpha helix, beta-barrel, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.70A {Escherichia coli} PDB: 3u33_A*
Probab=100.00 E-value=1.7e-31 Score=283.53 Aligned_cols=197 Identities=20% Similarity=0.339 Sum_probs=187.5
Q ss_pred HHHHHHhhhHhhcCCc--------------eeEEecCCCCCCCcCCCeeEEEEe-CCEEEEeeEEeeeeCCCCCcEEEEE
Q psy5138 3 TEQKEKYLPRLAQTDA--------------GSFALSEPGSGSDAFAMKTTATKD-GNHYILNGSKMWISNADIANIFLVM 67 (575)
Q Consensus 3 ~~qk~~~l~~~~~g~~--------------~~~a~se~~~g~~~~~~~~~a~~~-~~g~~l~G~k~~~t~~~~ad~~~v~ 67 (575)
++||++|+|++.+|++ +|+++|||++|||+..++|+|+++ +|+|+|||+|+|+| +..||+++|+
T Consensus 150 ~eqk~~~lp~l~sge~~p~~~~~~~~~g~~~~~a~TEp~~GSDl~~~~T~A~~~~~g~y~LnG~K~f~S-a~~Ad~~lVl 228 (541)
T 3djl_A 150 PAPFQDWTTPLLSDRYDSHLLPGGQKRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFS-VPQSDAHLVL 228 (541)
T ss_dssp CGGGGGGHHHHTCSCCCCCSSCGGGSSSCCEEEECCBTTBSSCGGGCCCEEEECTTSCEEEEEEEEEEE-CTTSSEEEEE
T ss_pred HHHHHHHHHHHhCCCcccccccccccccceeEEEeccCCcCCCcccceeEEEEcCCCeEEEEEEEEeec-ccccCEEEEE
Confidence 5799999999999985 799999999999999999999999 78999999999999 9999999999
Q ss_pred EEecCCCCccceeEEEEecCCC-----CeEEcccCcccCCCCCCceeEEeeeeEeCCCCcccCCCCcHHHHHHhhhHHHH
Q psy5138 68 ANVDVSKGYRGITCFIVERSME-----GFSVGKKENKLGMKASGTCSLHFDNVRVPEENIISGVGEGYKIAAGFLNQGRI 142 (575)
Q Consensus 68 a~~~~~~~~~~~~~~~vp~~~~-----Gv~~~~~~~~~g~~~~~~~~v~f~~v~Vp~~~~l~~~~~g~~~~~~~~~~~~~ 142 (575)
++++ .++++|+||++.| ||++.+.|+++|++++++++|.|+||+ ++++|.++.|+......++..|+
T Consensus 229 Art~-----~Gis~flVp~~~p~~~~~Gv~i~~~~~~~G~rgt~s~~v~fddv~---~~llG~~g~G~~~~~~~l~~~Rl 300 (541)
T 3djl_A 229 AQTA-----GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAI---GWLLGLEGEGIRLILKMGGMTRF 300 (541)
T ss_dssp EEET-----TEEEEEEEESBCTTSCBCSEEEEEECCCSSCTTSCEEEEEEEEEE---EEEESSTTCHHHHTHHHHHHHHH
T ss_pred EEEC-----CceEEEEEecCCCCCCcCCeEEeeccccCCCcCCceeEEEEccce---eeeeecCCchHHHHHHHHHHHHH
Confidence 9985 4689999999998 999999999999999999999999996 89999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhcccCccccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Q psy5138 143 GIAAQMTGLAQGCLDATIPYTLERSQVGHRIFDFQACNGGSVQHQISQAVTQVECARLLTYNAARLLEAGQ 213 (575)
Q Consensus 143 ~~~a~~~G~~~~a~~~a~~~a~~r~~~g~~~~~~q~~~~~~vq~~la~~~~~~~~~~~~~~~a~~~~~~~~ 213 (575)
.+++.++|+++++++.+++|+++|++||+++.++|. +|++|++|.+++++++++++++++.++.+.
T Consensus 301 ~~aa~~~G~a~~al~~a~~ya~~R~~fG~~i~~~p~-----vq~~La~~~~~~eaaral~~~aa~~~d~~~ 366 (541)
T 3djl_A 301 DCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPL-----MRHVLSRMALQLEGQTALLFRLARAWDRRA 366 (541)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCccCCCchhhCHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 999999999999999999999999999999999988 999999999999999999999999998764
No 70
>3hwc_A Chlorophenol-4-monooxygenase component 2; beta barrel, helix bundle, oxidoreductase; 2.50A {Burkholderia cepacia}
Probab=99.98 E-value=2.8e-31 Score=277.27 Aligned_cols=245 Identities=12% Similarity=0.101 Sum_probs=190.2
Q ss_pred HHHHHhcccc-cCCCceeEEeecCCCC--------CCccccceeEEEEeCCEEEEeeeeccccCCccccEEEEEEEeCC-
Q psy5138 265 TEQKEKYLPR-LAQTDAGSFALSEPGS--------GSDAFAMKTTATKDGNHYILNGSKMWISNADIANIFLVMANVDV- 334 (575)
Q Consensus 265 ~~~~~~~l~~-~~~~~~~~~~~te~~~--------gs~~~~~~~~a~~~~~g~~l~G~k~~~s~~~~a~~~~v~a~~~~- 334 (575)
.+|+++||++ ++|+.++++++|||.. |||+ .+.+ +.++++||+|||+|.|+||+..||+++|++++++
T Consensus 132 ~eq~~~~L~~l~~Ge~~~a~AltEP~~~rs~~~~~GSD~-~~~~-~~~~gdg~VlnG~K~~iT~a~~Ad~~lV~a~t~~~ 209 (515)
T 3hwc_A 132 TQNIHNFLKLLREKDLNCPLNFVDPQTDRSSDAAQARSP-NLRI-VEKTDDGIIVNGVKAVGTGIAFGDYMHIGCLYRPG 209 (515)
T ss_dssp HHHHHHHHHHHHHTTCCCCEECCCCCCCCCSCTTTSCCS-BCEE-EEECSSEEEEEEEEEEEESGGGCSEEEECCCCCTT
T ss_pred HHHHHHHHHHHHcCCcEEEEEeeCCCCCcccccccCCCc-ceEE-EEEECCEEEEEEEEEEECCccccCEEEEEEEecCC
Confidence 6889999999 8999999999999986 4676 4443 3456899999999999999999999999999832
Q ss_pred CCCCCceEEEEEeCCCCCeeecccCccCCC-----CC-----ccceeEEEcceeeCCCCcc--cCCCchHHHHHHHHhhh
Q psy5138 335 SKGYRGITCFIVERSMEGFSVGKKENKLGM-----KA-----SGTCSLHFDNVRVPEENII--SGVGEGYKIAAGFLNQG 402 (575)
Q Consensus 335 ~~~~~~~~~~lv~~~~~gv~i~~~~~~~G~-----rg-----~~s~~l~f~~v~Vp~~~~l--~~~~~~~~~~~~~~~~~ 402 (575)
.+++. +++|+||+++|||++.+.|..+|. +. ..++.|.||||+||++++| |..+.++.+....+...
T Consensus 210 ~~~~~-~s~FlVp~d~pGv~v~~~~~~~G~~~~d~~ls~~~~~~~a~v~FddV~VP~e~vl~~Ge~g~g~~~~~~~~~~~ 288 (515)
T 3hwc_A 210 IPGEQ-VIFAAIPTNTPGVTVFCRESTVKNDPAEHPLASQGDELDSTTVFDNVFIPWEQVFHIGNPEHAKLYPQRIFDWV 288 (515)
T ss_dssp CCGGG-CEEEEEETTCTTEEEEECCCCCCSCTTTCTTTTSCCCCEEEEEEEEEEEEGGGEEEESCTTGGGTHHHHHHHHH
T ss_pred CCCCe-EEEEEEECCCCCeEEeecccccCccccccccccccCCceEEEEECceEECHHHccCCCCccHHHHHHHHHHHHH
Confidence 23333 899999999999999887777663 22 3378999999999999999 78888876654333332
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhccccCccCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHc---CC--CcHHHHH
Q psy5138 403 RIGIAAQMTGLAQGCLDATIPYTLERSQFGHRIFDFQSVQHQISQAATQVECARLLTYNAARLLEA---GQ--PFIKQAS 477 (575)
Q Consensus 403 r~~~~a~~~G~~~~al~~~~~~~~~r~~~g~~l~~~~~~~~~la~~~~~~~aar~~~~~a~~~~~~---~~--~~~~~~~ 477 (575)
+....+..+|.+..++..+..++.. + +|.++|.||++|++|.+.++++|++++++++..+. +. +....++
T Consensus 289 ~r~~~~~~~~~a~~~lG~A~~~~e~---~--gI~~fQ~Vq~kLAem~~~lEaaR~l~~~Aa~~~d~~~~G~~~p~~~~as 363 (515)
T 3hwc_A 289 HYHILIRQVLRAELIVGLAILITEH---I--GTSKLPTVSARVAKLVAFHLAMQAHLIASEETGFHTKGGRYKPNPLIYD 363 (515)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH---H--TCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHTCEECTTCCEECCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH---c--CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCCHHHHH
Confidence 2111123344444444444443332 3 38999999999999999999999999999998875 32 5567899
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCCCcCCcchhhhhhhhcc
Q psy5138 478 MAKYFASEMAGHITRQCIDWMGGLGFTKDYPQEKFYRDCKMA 519 (575)
Q Consensus 478 ~ak~~~~~~~~~~~~~~~~~~G~~~~~~~~p~~R~~RD~~~~ 519 (575)
++|+++++.+.++++.++|++||.+++. |-++-|++....
T Consensus 364 ~AK~~ase~~~rv~~~a~qi~GG~~i~~--Ps~~d~~~pe~~ 403 (515)
T 3hwc_A 364 FGRAHFLQNQMSVMYELLDLAGRSSLMI--PSEGQWDDSQSG 403 (515)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGGTSC--CCHHHHHCTTTH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCeeeC--CCHHHhcCchhH
Confidence 9999999999999999999999999985 444666655444
No 71
>2ddh_A Acyl-COA oxidase; beta barrel, alpha UP-DOWN bundle, oxidoreductase; HET: FAD HXD; 2.07A {Rattus norvegicus} SCOP: a.29.3.2 a.29.3.2 e.6.1.2 PDB: 1is2_A*
Probab=99.98 E-value=3.6e-31 Score=287.88 Aligned_cols=204 Identities=25% Similarity=0.349 Sum_probs=181.8
Q ss_pred CHHHHHHhhhHhhcCC-ceeEEecCCCCCCCcCCCeeEEEEe--CCEEEEe-----eEEeeeeC-CCCCcEEEEEEEecC
Q psy5138 2 TTEQKEKYLPRLAQTD-AGSFALSEPGSGSDAFAMKTTATKD--GNHYILN-----GSKMWISN-ADIANIFLVMANVDV 72 (575)
Q Consensus 2 ~~~qk~~~l~~~~~g~-~~~~a~se~~~g~~~~~~~~~a~~~--~~g~~l~-----G~k~~~t~-~~~ad~~~v~a~~~~ 72 (575)
|++||++|||++.+|+ ++|+++|||++|+|+..++|+|+++ +|+|+|| |.|.|+|| +..||+++|+|+++.
T Consensus 116 t~eq~~~~L~~i~~Ge~~g~~a~TE~g~GSd~~~l~TtA~~d~~~~~~vLntP~~~G~K~wis~~a~~Ad~~vV~Ar~~~ 195 (661)
T 2ddh_A 116 TAEQQERFFMPAWNLEITGTYAQTEMGHGTHLRGLETTATYDPKTQEFILNSPTVTSIKWWPGGLGKTSNHAIVLAQLIT 195 (661)
T ss_dssp CHHHHHHHHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEEETTTTEEEEECCSSTTSEECCTTTTTTCSEEEEEEEEEE
T ss_pred CHHHHHHHHHHHhCCCeeEEEeeccCCcCcCcccceeEEEEcCCCCeEEEcCCCCCeEEEecCCCcccCCEEEEEEEEcc
Confidence 6899999999999999 6999999999999999999999998 7899999 99999999 789999999999864
Q ss_pred CCCccceeEEEEec-C------CCCeEEcccCcccCCCCCCceeEEeeeeEeCCCCcccCC------CCc-----HHHHH
Q psy5138 73 SKGYRGITCFIVER-S------MEGFSVGKKENKLGMKASGTCSLHFDNVRVPEENIISGV------GEG-----YKIAA 134 (575)
Q Consensus 73 ~~~~~~~~~~~vp~-~------~~Gv~~~~~~~~~g~~~~~~~~v~f~~v~Vp~~~~l~~~------~~g-----~~~~~ 134 (575)
+++..++++|+||. + .|||++.+.|+++|+++++++.|.|+||+||.+++|+.. +.+ +....
T Consensus 196 ~~~~~G~~~FlVp~rd~~~~~~~pGV~v~~~~~k~Gl~g~~~~~v~Fd~VrVP~~~lLg~~~~v~~~G~~~~~~~~~~~~ 275 (661)
T 2ddh_A 196 QGECYGLHAFVVPIREIGTHKPLPGITVGDIGPKFGYEEMDNGYLKMDNYRIPRENMLMKYAQVKPDGTYVKPLSNKLTY 275 (661)
T ss_dssp TTEEEEEEEEEEECBCTTTCCBCTTEEEEECCCCSSCTTCCCEEEEESSEEEEGGGBCCSSCEECTTCCEECCC------
T ss_pred CCCCCceEEEEEecccccCCCCCCCeEEecCcccccCCCCcceEEEeccEEECHHHhcCcccccCCCCceeccchHHHHH
Confidence 44445789999995 4 799999999999999999999999999999999999864 323 56667
Q ss_pred HhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCc-------cccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5138 135 GFLNQGRIGIAAQMTGLAQGCLDATIPYTLERSQVGH-------RIFDFQACNGGSVQHQISQAVTQVECARLLTYNAAR 207 (575)
Q Consensus 135 ~~~~~~~~~~~a~~~G~~~~a~~~a~~~a~~r~~~g~-------~~~~~q~~~~~~vq~~la~~~~~~~~~~~~~~~a~~ 207 (575)
..+..+|+.+++.++|+++++++.+++|++.|+|||. |+.+||. +|++|+++.+.+++++.+++.+++
T Consensus 276 ~~l~~~R~~iaa~~~G~a~~al~~a~~ya~~R~qfg~~~~~~e~~i~~~q~-----vq~rLa~~~a~~~aar~~~~~aa~ 350 (661)
T 2ddh_A 276 GTMVFVRSFLVGNAAQSLSKACTIAIRYSAVRRQSEIKQSEPEPQILDFQT-----QQYKLFPLLATAYAFHFVGRYMKE 350 (661)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCBCSCSSTTSCCCBGGGSHH-----HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcccCCCCCCccccccccHH-----HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7788899999999999999999999999999999998 7888887 999999999999999999999999
Q ss_pred Hhh
Q psy5138 208 LLE 210 (575)
Q Consensus 208 ~~~ 210 (575)
.++
T Consensus 351 ~~~ 353 (661)
T 2ddh_A 351 TYL 353 (661)
T ss_dssp HHH
T ss_pred HHH
Confidence 885
No 72
>1w07_A Acyl-COA oxidase; oxidoreductase, peroxisomal beta-oxidation, FAD cofactor; HET: FAD; 2.0A {Arabidopsis thaliana} SCOP: a.29.3.2 a.29.3.2 e.6.1.2 PDB: 2fon_A*
Probab=99.97 E-value=3.6e-31 Score=288.50 Aligned_cols=204 Identities=25% Similarity=0.388 Sum_probs=184.8
Q ss_pred CHHHHHHhhhHhhcCC-ceeEEecCCCCCCCcCCCeeEEEEe--CCEEEEe-----eEEeeeeC-CCCCcEEEEEEEecC
Q psy5138 2 TTEQKEKYLPRLAQTD-AGSFALSEPGSGSDAFAMKTTATKD--GNHYILN-----GSKMWISN-ADIANIFLVMANVDV 72 (575)
Q Consensus 2 ~~~qk~~~l~~~~~g~-~~~~a~se~~~g~~~~~~~~~a~~~--~~g~~l~-----G~k~~~t~-~~~ad~~~v~a~~~~ 72 (575)
|++||++|||++++|+ ++|+++|||++|+|+..++|+|+++ +|||+|| |+|.|+|| +..||+++|+|++++
T Consensus 115 t~eqk~~~L~~i~~Ge~~~~~a~TEp~~GSd~~~l~TtA~~d~~~~g~vLntP~~~G~K~~is~~a~~Ad~~lV~Ar~~~ 194 (659)
T 1w07_A 115 TEEQQKKWLSLANKMQIIGCYAQTELGHGSNVQGLETTATLDPKTDEFVIHTPTQTASKWWPGGLGKVSTHAVVYARLIT 194 (659)
T ss_dssp CHHHHHHHHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEEETTTTEEEEECCSGGGSEECCTTTTTTCSEEEEEEEEEE
T ss_pred CHHHHHHHhhHHhcCCEEEEEEecCCCCCCCcccceeEEEEcCCCCEEEEcCCCCCeEEEeecCCCCCCCEEEEEEEECC
Confidence 6899999999999999 6999999999999999999999998 6899999 99999999 899999999999865
Q ss_pred CCCccceeEEEEec-C------CCCeEEcccCcccC---CCCCCceeEEeeeeEeCCCCcccC------CCCcH------
Q psy5138 73 SKGYRGITCFIVER-S------MEGFSVGKKENKLG---MKASGTCSLHFDNVRVPEENIISG------VGEGY------ 130 (575)
Q Consensus 73 ~~~~~~~~~~~vp~-~------~~Gv~~~~~~~~~g---~~~~~~~~v~f~~v~Vp~~~~l~~------~~~g~------ 130 (575)
+++..++++|+||. + .|||++.+.|+++| +++++++.|.|+||+||.+++|+. .+.++
T Consensus 195 ~~~~~G~~~flVp~r~~~~~~~~pGV~v~~~~~~~G~~~~~g~~~~~v~fd~VrVP~~~lLg~~~~v~~~g~~~~~~~~~ 274 (659)
T 1w07_A 195 NGKDYGIHGFIVQLRSLEDHSPLPNITVGDIGTKMGNGAYNSMDNGFLMFDHVRIPRDQMLMRLSKVTREGEYVPSDVPK 274 (659)
T ss_dssp TTEEEEEEEEEEECBCTTTCCBCTTEEEEECCCBSSSSGGGGSCCEEEEESSEEEEGGGBCCSSEEECTTCCEEECSSCG
T ss_pred CCCCCCeEEEEEEccccCCCCCCCCeEEecCccCccccccCCCCceEEEeccEEECHHHhcCCcCccCCCCceecCCccH
Confidence 44445789999995 4 69999999999999 999999999999999999999985 45443
Q ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCc-------cccccccCCChhHHHHHHHHHHHHHHHHHHHH
Q psy5138 131 KIAAGFLNQGRIGIAAQMTGLAQGCLDATIPYTLERSQVGH-------RIFDFQACNGGSVQHQISQAVTQVECARLLTY 203 (575)
Q Consensus 131 ~~~~~~~~~~~~~~~a~~~G~~~~a~~~a~~~a~~r~~~g~-------~~~~~q~~~~~~vq~~la~~~~~~~~~~~~~~ 203 (575)
......+..+|+.+++.++|+++++++.+++|++.|+|||+ |+.+||. +|++++++.+.+++++++++
T Consensus 275 ~~~~~~l~~~R~~~aa~~~G~a~~al~~a~~ya~~R~qfg~~~~~~e~pi~~~q~-----vq~rLa~~~a~~~a~~~~~~ 349 (659)
T 1w07_A 275 QLVYGTMVYVRQTIVADASNALSRAVCIATRYSAVRRQFGAHNGGIETQVIDYKT-----QQNRLFPLLASAYAFRFVGE 349 (659)
T ss_dssp GGCTTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCBCSCC---CCCCBGGGSHH-----HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCCCCCCcccchhccHH-----HHHHHHHHHHHHHHHHHHHH
Confidence 24456678899999999999999999999999999999998 7899988 99999999999999999999
Q ss_pred HHHHHhh
Q psy5138 204 NAARLLE 210 (575)
Q Consensus 204 ~a~~~~~ 210 (575)
.+++.++
T Consensus 350 ~aa~~~~ 356 (659)
T 1w07_A 350 WLKWLYT 356 (659)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9988763
No 73
>3mxl_A Nitrososynthase; flavin monooxygenase, acyl-COA dehydrogenas oxidoreductase; 3.15A {Micromonospora carbonacea}
Probab=99.97 E-value=6.5e-31 Score=272.05 Aligned_cols=195 Identities=22% Similarity=0.243 Sum_probs=172.1
Q ss_pred CHHHH---HHhhhHhhcCC-ceeEEecCCCCCCCcCCCeeEEEEeCCEEEEeeEEeeeeCCCCCcEEEEEEEecCCCCcc
Q psy5138 2 TTEQK---EKYLPRLAQTD-AGSFALSEPGSGSDAFAMKTTATKDGNHYILNGSKMWISNADIANIFLVMANVDVSKGYR 77 (575)
Q Consensus 2 ~~~qk---~~~l~~~~~g~-~~~~a~se~~~g~~~~~~~~~a~~~~~g~~l~G~k~~~t~~~~ad~~~v~a~~~~~~~~~ 77 (575)
|++|| ++|||++.+|+ ++++++|||++|+ ..++ ++++|||+|||+|.|+||+..||+++|+++++++++..
T Consensus 109 ~~~qk~~~~~~l~~~~~g~~~~~~a~tEp~~~~--~~~~---t~~~~g~~lnG~K~~is~a~~Ad~~~v~a~~~~~~~~~ 183 (395)
T 3mxl_A 109 TPPVRAMAERLLRAMAEGEAAVCGALKDAPGVV--TELH---SDGAGGWLLSGRKVLVSMAPIATHFFVHAQRRDDDGSV 183 (395)
T ss_dssp CHHHHHHHHHHHHHHHHTSCCEECCCSBCTTCC--CEEE---ECSSSCEEEEEEEEEETTGGGCSEECCCEEEECTTSCE
T ss_pred CHHHHhHHHHHHHHHhcCCcEEEEEecCCCCCC--CceE---EecCCEEEEeeEEEEecCccccCEEEEEEEeCCCCCCC
Confidence 67898 99999999999 6999999998652 2222 23788999999999999999999999999987655556
Q ss_pred ceeEEEEecCCCCeEEcccCcccCCCCCCceeEEeeeeEeCCCCccc--CCCCcHHHHHHhhhHHHHHHHHHHHHHHHHH
Q psy5138 78 GITCFIVERSMEGFSVGKKENKLGMKASGTCSLHFDNVRVPEENIIS--GVGEGYKIAAGFLNQGRIGIAAQMTGLAQGC 155 (575)
Q Consensus 78 ~~~~~~vp~~~~Gv~~~~~~~~~g~~~~~~~~v~f~~v~Vp~~~~l~--~~~~g~~~~~~~~~~~~~~~~a~~~G~~~~a 155 (575)
++++|+||.+.|||++.+.|+++|++++++++|.||||+||++++++ .++.++..........++.+++.++|+++++
T Consensus 184 g~~~flV~~~~pGv~v~~~~~~~G~r~~~~~~v~f~~v~Vp~~~~lg~~~~g~g~~~~~~~~~~~r~~~aa~~~G~a~~a 263 (395)
T 3mxl_A 184 FLAVPVVHRDAPGLTVLDNWDGLGMRASGTLEVVFDRCPVRADELLERGPVGARRDAVLAGQTVSSITMLGIYAGIAQAA 263 (395)
T ss_dssp EEECCCEETTCTTEEEECCCCBSSCTTSCCEEEEEEEEEECGGGCCEEEESSCCCTTHHHHHHHHHGGGHHHHHHHHHHH
T ss_pred ceEEEEEECCCCceEeCCCchhcCCCCCCcceEEEcceEcCHHHhcCCCCCCccHHHHHhhhHHHHHHHHHHHHHHHHHH
Confidence 78999999999999999999999999999999999999999999998 6677765555445668899999999999999
Q ss_pred HHHHHHHhhhhcccCccccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy5138 156 LDATIPYTLERSQVGHRIFDFQACNGGSVQHQISQAVTQVECARLLTYNAARLLEA 211 (575)
Q Consensus 156 ~~~a~~~a~~r~~~g~~~~~~q~~~~~~vq~~la~~~~~~~~~~~~~~~a~~~~~~ 211 (575)
++.+++|++. +|+.+||. +|+++++|.+.++++|++++++++.++.
T Consensus 264 l~~a~~~a~~-----r~i~~~q~-----vq~~la~~~~~~~aar~~~~~aa~~~d~ 309 (395)
T 3mxl_A 264 RDIAVGFCAG-----RGGEPRAG-----ARALVAGLDTRLYALRTTVGAALTNADA 309 (395)
T ss_dssp HHHHHHHHHT-----TCSCCCHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcC-----CCCCCCHH-----HHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 9999999984 48888988 9999999999999999999999998875
No 74
>2rfq_A 3-HSA hydroxylase, oxygenase; rhodococcus SP. RHA1, structural genomics protein structure initiative, midwest center for structural genomics, MCSG; HET: 1PS; 1.65A {Rhodococcus SP} PDB: 3aff_A 3afe_A
Probab=99.97 E-value=2.8e-30 Score=267.11 Aligned_cols=194 Identities=20% Similarity=0.240 Sum_probs=171.3
Q ss_pred CHHHHHHhhhHhhcCC-ceeEEecCCCCCCCcCCCeeEEEEeCCEEEEeeEEeeeeCCCCCcEEEEEEEecCCCCcccee
Q psy5138 2 TTEQKEKYLPRLAQTD-AGSFALSEPGSGSDAFAMKTTATKDGNHYILNGSKMWISNADIANIFLVMANVDVSKGYRGIT 80 (575)
Q Consensus 2 ~~~qk~~~l~~~~~g~-~~~~a~se~~~g~~~~~~~~~a~~~~~g~~l~G~k~~~t~~~~ad~~~v~a~~~~~~~~~~~~ 80 (575)
+++||++|+| +|+ +++++++ | .+++++++|||+|||+|.|+||+..||+++|++++++++.+.+++
T Consensus 101 ~~~q~~~~l~---~g~~~~~~a~t-p---------~t~A~~~~~g~~lnG~K~~is~a~~Ad~~~v~a~~~~~g~~~~~~ 167 (394)
T 2rfq_A 101 QQAQEDVWGN---DTDVRISSSYA-P---------MGAGQVVDGGYTVNGAWAWSSGCDHASWAVLGGPVIKDGRPVDFV 167 (394)
T ss_dssp HHHHHHHHSS---CTTCCEEEECS-C---------SEEEEEETTEEEEEEEEEEETTGGGCSEEEEEEEEEETTEEEEEE
T ss_pred HHHHHHHhCC---CCCeEEEeccC-C---------CceEEEeCCeEEEeeeEeccCCCcccceEEEeeeecCCCCCCcee
Confidence 4789999999 687 6899987 4 578999999999999999999999999999999984222234789
Q ss_pred EEEEecCCCCeEEcccCcccCCCCCCceeEEeeeeEeCCCCcccC--------CC----CcHHHHHHhhhHHHHHHHHHH
Q psy5138 81 CFIVERSMEGFSVGKKENKLGMKASGTCSLHFDNVRVPEENIISG--------VG----EGYKIAAGFLNQGRIGIAAQM 148 (575)
Q Consensus 81 ~~~vp~~~~Gv~~~~~~~~~g~~~~~~~~v~f~~v~Vp~~~~l~~--------~~----~g~~~~~~~~~~~~~~~~a~~ 148 (575)
+|+||.+ ||++.+.|+++|++++++++|.||||+||++++++. ++ .++.+....+...|+.+++.+
T Consensus 168 ~flV~~~--gv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~~~~g~~~g~~~~~g~~~~~~~~~~~r~~~aa~~ 245 (394)
T 2rfq_A 168 SFLIPRE--DYRIDDVWNVVGLRGTGSNTVVVEDVFVPTHRVLSFKAMSNLTAPGLERNTAPVYKMPWGTIHPTTISAPI 245 (394)
T ss_dssp EEEEEGG--GCEEECCCCBSSCGGGCCEEEEEEEEEEEGGGEEEHHHHHTTCCGGGTTCCCGGGGSCHHHHHHHHHHHHH
T ss_pred EEEEEhh--hcEEeCCccccccccCCCCceEEcceEcChHHhcccccccccCCCCcccCCCccccccHHHHHHHHHHHHH
Confidence 9999997 999999999999999999999999999999999974 22 345455566778899999999
Q ss_pred HHHHHHHHHHHHHHhhhhc---ccCccccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhh----cCCCc
Q psy5138 149 TGLAQGCLDATIPYTLERS---QVGHRIFDFQACNGGSVQHQISQAVTQVECARLLTYNAARLLE----AGQPF 215 (575)
Q Consensus 149 ~G~~~~a~~~a~~~a~~r~---~~g~~~~~~q~~~~~~vq~~la~~~~~~~~~~~~~~~a~~~~~----~~~~~ 215 (575)
+|+++++++.+++|+++|+ +||+|+.+||. +|+++++|.+.++++|++++++++.++ .+...
T Consensus 246 ~G~a~~al~~a~~ya~~R~~~~~fG~~i~~~q~-----vq~~la~~~~~~~aar~~~~~aa~~~~~~~~~g~~~ 314 (394)
T 2rfq_A 246 VGMAYGAYDAHVEHQGKRVRAAFAGEKAKDDPF-----AKVRIAEASSDIDAAWRQLSGNVADEYALLVAGEEV 314 (394)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCTTCGGGSCHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHHhccCCcCCCCCcccccCHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 9999999999999999999 99999999998 999999999999999999999999998 66543
No 75
>3m9v_A FAD-dependent oxidoreductase; KIJD3, fatty acyl-COA dehydrogenase family, kijanose, kijani FAD, flavoprotein; HET: TYD; 2.05A {Actinomadura kijaniata}
Probab=99.97 E-value=3.6e-30 Score=269.88 Aligned_cols=195 Identities=19% Similarity=0.289 Sum_probs=167.2
Q ss_pred CHHH---HHHhhhHhhcCC-ceeEEecCCCCCCCcCCCeeEEEEeCCEEEEeeEEeeeeCCCCCcEEEEEEEecCCCCcc
Q psy5138 2 TTEQ---KEKYLPRLAQTD-AGSFALSEPGSGSDAFAMKTTATKDGNHYILNGSKMWISNADIANIFLVMANVDVSKGYR 77 (575)
Q Consensus 2 ~~~q---k~~~l~~~~~g~-~~~~a~se~~~g~~~~~~~~~a~~~~~g~~l~G~k~~~t~~~~ad~~~v~a~~~~~~~~~ 77 (575)
|++| |++||+.+.+|+ ++|+++|||+++ ...+. ++++|||+|||+|.|+||+..||+++|+++++++.+..
T Consensus 120 t~~q~~~k~~~l~~l~~g~~~~~~a~tEp~~~--~~~~~---t~~~~g~vlnG~K~~~s~a~~Ad~~~v~art~~~~~~~ 194 (439)
T 3m9v_A 120 DERARTLAERILRGMVAGDAVVCSGIKDHHTA--VTTLR---PDGAGGWLLSGRKTLVSMAPVGTHFVINARTDGTDGPP 194 (439)
T ss_dssp CHHHHHHHHHHHHHHHHTCCCEEEECEECTTC--CCEEE---ECSSSCEEEEEEEEEETTGGGCSEEEECEEECC--CCC
T ss_pred CHHHHHHHHHHHHHHhCCCceEEEeecCCCCC--CCcee---eccCCEEEEEeEEEeecCccccCEEEEEEEecCCCCCc
Confidence 5677 999999999999 699999999853 22222 23788999999999999999999999999987554556
Q ss_pred ceeEEEEecCCCCeEEcccCcccCCCCCCceeEEeeeeEeCCCCccc--CCCCcHHHHHHhhhHHHHHHHHHHHHHHHHH
Q psy5138 78 GITCFIVERSMEGFSVGKKENKLGMKASGTCSLHFDNVRVPEENIIS--GVGEGYKIAAGFLNQGRIGIAAQMTGLAQGC 155 (575)
Q Consensus 78 ~~~~~~vp~~~~Gv~~~~~~~~~g~~~~~~~~v~f~~v~Vp~~~~l~--~~~~g~~~~~~~~~~~~~~~~a~~~G~~~~a 155 (575)
++++|+||.+.|||++.+.|+++|++++++++|.||||+||++++|+ ..+.++.........+++.+++.++|+++++
T Consensus 195 g~~~flVp~~~pGv~i~~~~~~~G~~~~~~~~v~fddv~VP~~~~lg~~~~g~g~~~~~~~~~~~r~~~aa~~~G~a~~a 274 (439)
T 3m9v_A 195 RLASPVVTRDTPGFTVLDNWDGLGMRASGTVDIVFDDCPIPADHVLMRDPVGARNDAVLAGQTVSSVSVLGVYVGVAQAA 274 (439)
T ss_dssp CEEEEEEETTCTTEEECCCCCCSSCTTSCCEEEEEEEEEECGGGEEECCC--CCCGGGHHHHHHHHGGGHHHHHHHHHHH
T ss_pred eeEEEEEECCCCCeEECCCcccCCcCCCCceeEEEeeeEcCHHHccCCCCCCchHHHHhhchHHHHHHHHHHHHHHHHHH
Confidence 78999999999999999999999999999999999999999999998 6666654444445567889999999999999
Q ss_pred HHHHHHHhhhhcccCccccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy5138 156 LDATIPYTLERSQVGHRIFDFQACNGGSVQHQISQAVTQVECARLLTYNAARLLEA 211 (575)
Q Consensus 156 ~~~a~~~a~~r~~~g~~~~~~q~~~~~~vq~~la~~~~~~~~~~~~~~~a~~~~~~ 211 (575)
++.+++|++.| ++.++|. +|++|++|.++++++|++++++++.++.
T Consensus 275 l~~a~~~a~~r-----~i~~~~~-----vq~~la~~~~~~~aar~l~~~aa~~~d~ 320 (439)
T 3m9v_A 275 YDTAVAALERR-----PEPPQAA-----ALTLVAEIDSRLYALRATAGSALTAADA 320 (439)
T ss_dssp HHHHHHHHHTC-----SSCCCHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCC-----CCCCCHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999854 7888887 9999999999999999999999887764
No 76
>2or0_A Hydroxylase; APC7385, rhodococcus SP. RHA1, structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; HET: MSE; 2.10A {Rhodococcus SP}
Probab=99.97 E-value=5e-30 Score=266.69 Aligned_cols=194 Identities=20% Similarity=0.261 Sum_probs=170.2
Q ss_pred CHHHHHHhhhHhhcCC-ceeEEecCCCCCCCcCCCeeEEEEeCCEEEEeeEEeeeeCCCCCcEEEEEEEecCCCCcc---
Q psy5138 2 TTEQKEKYLPRLAQTD-AGSFALSEPGSGSDAFAMKTTATKDGNHYILNGSKMWISNADIANIFLVMANVDVSKGYR--- 77 (575)
Q Consensus 2 ~~~qk~~~l~~~~~g~-~~~~a~se~~~g~~~~~~~~~a~~~~~g~~l~G~k~~~t~~~~ad~~~v~a~~~~~~~~~--- 77 (575)
+++||++|+| +|+ ++++++| | .+++++++|||+|||+|.|+||+..||+++|+++++++++..
T Consensus 114 ~~~q~~~~l~---~g~~~~a~a~t-p---------~t~A~~~~~g~~lnG~K~~is~a~~Ad~~~v~a~~~~~~g~~~~~ 180 (414)
T 2or0_A 114 PQVQEEIWGE---DNDTWMASPYA-P---------MGVATPVDGGYVLKGRWSFSSGTDHCQWAFLGAMVGDGEGGIATP 180 (414)
T ss_dssp HHHHHHHHSS---CTTCCEECCCS-C---------CEEEEEETTEEEEEEEEEEETTGGGCSEEEEEEEECC-----CCC
T ss_pred HHHHHHHHcc---CCCeEEEeccC-C---------CceeEEECCeEEEEeeEeccCCCchhhEEEEEEEecCCCCCcccc
Confidence 4789999999 688 6888887 4 578999999999999999999999999999999986432333
Q ss_pred ceeEEEEecCCCCeEEc-ccCcccCCCCCCceeEEeeeeEeCCCCcccC--------CC----CcHHHHHHhhhHHHHHH
Q psy5138 78 GITCFIVERSMEGFSVG-KKENKLGMKASGTCSLHFDNVRVPEENIISG--------VG----EGYKIAAGFLNQGRIGI 144 (575)
Q Consensus 78 ~~~~~~vp~~~~Gv~~~-~~~~~~g~~~~~~~~v~f~~v~Vp~~~~l~~--------~~----~g~~~~~~~~~~~~~~~ 144 (575)
++++|+||.+ ||++. +.|+++|++++++++|.||||+||++++|+. ++ .|+.+....+...|+.+
T Consensus 181 g~~~flV~~~--gv~v~~~~~~~~G~r~~~~~~v~fd~v~VP~~~~lg~~~~~~g~~~g~~~~~g~~~~~~~~~~~r~~~ 258 (414)
T 2or0_A 181 SSLHVILPRT--DYQIVEDTWDVIGLRGTGSKDLIVDGAFVPGYRTLNAAKVMDGRAQKEAGRPEPLFNMPYSCMFPLGI 258 (414)
T ss_dssp SEEEEEEEGG--GCEEETTCCCBSSCGGGCCEEEEEEEEEEEGGGEEEHHHHHHSHHHHHHTCSCSGGGSCHHHHHHHHH
T ss_pred eeEEEEEEhh--hcEEecCCCccccCcccCCCcEEEccEEecHHHeeccccccccCCCccccCCCccccccHHHHHHHHH
Confidence 7899999997 99999 8899999999999999999999999999975 22 34445556678889999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhccc-CccccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhh----cCCCc
Q psy5138 145 AAQMTGLAQGCLDATIPYTLERSQV-GHRIFDFQACNGGSVQHQISQAVTQVECARLLTYNAARLLE----AGQPF 215 (575)
Q Consensus 145 ~a~~~G~~~~a~~~a~~~a~~r~~~-g~~~~~~q~~~~~~vq~~la~~~~~~~~~~~~~~~a~~~~~----~~~~~ 215 (575)
++.++|+++++++.+++|+++|++| |+|+.++|. +|++|++|.+.++++|++++++++.++ .+...
T Consensus 259 aa~~lG~a~~al~~a~~ya~~R~~f~G~~i~~~q~-----vq~~la~~~~~~~aar~l~~~aa~~~~~~~~~g~~~ 329 (414)
T 2or0_A 259 TAAVIGITEGALACHIAVQKDRVAITGQKIKEDPY-----VLSAIGESAAEINASRVSLIETADRFYDKVDAGKEI 329 (414)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCBCTTSCBGGGCHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCCccccCHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 9999999999999999999999999 999999998 999999999999999999999999988 65543
No 77
>2jbr_A P-hydroxyphenylacetate hydroxylase C2 oxygenase C; flavoenzyme hydroxylase, oxidoreductase; 2.3A {Acinetobacter baumannii} PDB: 2jbs_A* 2jbt_A*
Probab=99.97 E-value=4.8e-30 Score=267.38 Aligned_cols=194 Identities=23% Similarity=0.190 Sum_probs=173.1
Q ss_pred CHHHHHHhhhHhhcCC-ceeEEecCCCCCCCcCCCeeEEEEeCCEEEEeeEEeeeeCCCCCcEEEEEEEecCCCCcccee
Q psy5138 2 TTEQKEKYLPRLAQTD-AGSFALSEPGSGSDAFAMKTTATKDGNHYILNGSKMWISNADIANIFLVMANVDVSKGYRGIT 80 (575)
Q Consensus 2 ~~~qk~~~l~~~~~g~-~~~~a~se~~~g~~~~~~~~~a~~~~~g~~l~G~k~~~t~~~~ad~~~v~a~~~~~~~~~~~~ 80 (575)
+++||++|+|. |+ ++++++| | .+++++++|||+|||+|.|+||+..||+++|+++++++++..+++
T Consensus 129 ~~~q~~~~l~~---g~~~~a~a~t-p---------~t~A~~~~~g~~lnG~K~~is~a~~Ad~~~v~a~~~~~~g~~g~~ 195 (422)
T 2jbr_A 129 KQLQDEIWLKD---PDATASSSIA-P---------FGKVEEVEGGIILNGDYGWSSGCDHAEYAIVGFNRFDADGNKIYS 195 (422)
T ss_dssp HHHHHHHHTTC---TTCCEEEECS-C---------CSEEEEETTEEEEEEEEEEETTGGGCSEEEEEEEEECTTSCEEEE
T ss_pred HHHHHHHHccC---CCeEEEeecC-C---------CeeEEEeCCEEEEeeeEeeecCCccccEEEEEEEecCCCCCceeE
Confidence 47899999996 77 6889887 4 478999999999999999999999999999999986433445789
Q ss_pred EEEEecCCCCeEEcccCcccCCCCCCceeEEeeeeEeCCCCcccCC--------CCc-----HHHHHHhhhHHHHHHHHH
Q psy5138 81 CFIVERSMEGFSVGKKENKLGMKASGTCSLHFDNVRVPEENIISGV--------GEG-----YKIAAGFLNQGRIGIAAQ 147 (575)
Q Consensus 81 ~~~vp~~~~Gv~~~~~~~~~g~~~~~~~~v~f~~v~Vp~~~~l~~~--------~~g-----~~~~~~~~~~~~~~~~a~ 147 (575)
+|+||.+ ||++.+.|+++|++++++++|.||||+||++++++.. +.| +.+....+...|+.+++.
T Consensus 196 ~flV~~~--gv~v~~~~~~~G~r~~~~~~v~fddv~VP~~~~lg~~~~~~g~~~g~g~~~~~~~~~~~~~~~~r~~~aa~ 273 (422)
T 2jbr_A 196 FGVIPRS--DYEIVDNWYAQAIKSSGSKMLKLVNVFIPEYRISKAKDMMEGKSAGFGLYPDSKIFYTPYRPYFASGFSAV 273 (422)
T ss_dssp EEEEEGG--GCEEECCCCBSSSGGGCCEEEEEEEEEEEGGGEEEHHHHHHTCSTTTTSCTTCSSSSSCHHHHHTTHHHHH
T ss_pred EEEEEcC--ceEEeCCccccCcCCCCCCcEEEeeEEecHHHeecccccccCCCCcccccCCCcccccchHHHHHHHHHHH
Confidence 9999997 9999999999999999999999999999999999764 445 555566778889999999
Q ss_pred HHHHHHHHHHHHHHHhhhhc--ccCccccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhh----cCCCc
Q psy5138 148 MTGLAQGCLDATIPYTLERS--QVGHRIFDFQACNGGSVQHQISQAVTQVECARLLTYNAARLLE----AGQPF 215 (575)
Q Consensus 148 ~~G~~~~a~~~a~~~a~~r~--~~g~~~~~~q~~~~~~vq~~la~~~~~~~~~~~~~~~a~~~~~----~~~~~ 215 (575)
++|+++++++.+++|+++|+ +||+|+++||. +|+++++|.+.++++|++++++++.++ .+...
T Consensus 274 ~lG~a~~al~~a~~ya~~R~~~~fG~~i~~~q~-----vq~~la~~~~~~~aar~~~~~aa~~~d~~~~~g~~~ 342 (422)
T 2jbr_A 274 SLGIAERMIEAFKEKQRNRVRAYTGANVGLATP-----ALMRIAESTHQVAAARALLEKTWEDHRIHGLNHQYP 342 (422)
T ss_dssp HHHHHHHHHHHHHHHHTTCBCTTTCCBCTTCHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCCccccCHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 99999999999999999998 99999999998 999999999999999999999999988 55543
No 78
>2yyk_A 4-hydroxyphenylacetate-3-hydroxylase; structurome, riken spring-8 center, oxygnase component, 4- hydroxyphenylacetate 3-monooxygenase; 1.60A {Thermus thermophilus} PDB: 2yyl_A* 2yym_A* 2yyi_A* 2yyg_A* 2yyj_A*
Probab=99.96 E-value=1.1e-28 Score=258.59 Aligned_cols=219 Identities=19% Similarity=0.234 Sum_probs=174.1
Q ss_pred HHHHHHhhhHhhcCC-ceeEEecCCCCC--------CCcCCCeeEEE-EeCCEEEEeeEEeeeeCCCCCcEEEEEEEecC
Q psy5138 3 TEQKEKYLPRLAQTD-AGSFALSEPGSG--------SDAFAMKTTAT-KDGNHYILNGSKMWISNADIANIFLVMANVDV 72 (575)
Q Consensus 3 ~~qk~~~l~~~~~g~-~~~~a~se~~~g--------~~~~~~~~~a~-~~~~g~~l~G~k~~~t~~~~ad~~~v~a~~~~ 72 (575)
++||++|||.+++|+ ++++++|||+.| +|+. +.++++ +++|||+|||.|.|+|| ..||+++|+++++.
T Consensus 123 ~eqk~~~L~~l~~Ge~~~a~a~TEP~~grs~~~s~gsd~~-~~~~~~~~~gdg~VlnG~K~~iT~-~~Ad~~iV~art~~ 200 (481)
T 2yyk_A 123 AENVRNYYRYLRDQDLATTHALTNPQVNRARPPSGQPDPY-IPVGVVKQTEKGIVVRGARMTATF-PLADEVLIFPSILL 200 (481)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEECCCCCCTTC----CCCSC-SBCEEEEECSSEEEEEEEEEEEEC-CCSSEEEECCCSCC
T ss_pred HHHHHHHHHHHHcCCeEEEEeeECCCCCCCCCccccCCcc-cceEEEEEECCEEEEEeEEEEecc-ccccEEEEEEecCC
Confidence 689999999999999 599999999876 5553 566664 68999999999999999 99999999999763
Q ss_pred C-CCccceeEEEEecCCCCeEEcc--cCcc--------cCCCC-CCceeEEeeeeEeCCCCcc--cCCCCcHHHH--HHh
Q psy5138 73 S-KGYRGITCFIVERSMEGFSVGK--KENK--------LGMKA-SGTCSLHFDNVRVPEENII--SGVGEGYKIA--AGF 136 (575)
Q Consensus 73 ~-~~~~~~~~~~vp~~~~Gv~~~~--~~~~--------~g~~~-~~~~~v~f~~v~Vp~~~~l--~~~~~g~~~~--~~~ 136 (575)
+ +...++++|+||.++|||++.+ .+.. +|.+. .++++|.||||+||++++| |..+.++.+. ..+
T Consensus 201 ~~~~~~~~s~flVp~dtpGv~v~~r~~~~~~~s~~d~~lg~r~~~~~~~v~FddV~VP~e~vl~~G~~~~g~~~~~~~~~ 280 (481)
T 2yyk_A 201 QAGSEKYALAFALPTSTPGLHFVCREALVGGDSPFDHPLSSRVEEMDCLVIFDDVLVPWERVFILGNVELCNNAYGATGA 280 (481)
T ss_dssp CTTCGGGCEEEEEETTCTTEEEEECCCCCCCSCTTTCTTTTTCCCCEEEEEEEEEEEEGGGEEEESCHHHHHHHHHHHTH
T ss_pred CCCCCCeEEEEEEECCCCCEEEEeccccccCCccccccccccCCCCeEEEEEccEEECHHHccCCCCccHHHHHHHHhhc
Confidence 2 2234589999999999999963 3332 35553 6778999999999999998 5554555444 567
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCccccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhc---CC
Q psy5138 137 LNQGRIGIAAQMTGLAQGCLDATIPYTLERSQVGHRIFDFQACNGGSVQHQISQAVTQVECARLLTYNAARLLEA---GQ 213 (575)
Q Consensus 137 ~~~~~~~~~a~~~G~~~~a~~~a~~~a~~r~~~g~~~~~~q~~~~~~vq~~la~~~~~~~~~~~~~~~a~~~~~~---~~ 213 (575)
+..+|+..++..+|.++.++..+..++.. +| +.+||. +|++|++|.++++++|++++++++..+. +.
T Consensus 281 l~~~r~~~~~~~~g~a~~~lg~a~~~~~~---~g--i~~~q~-----vq~~laem~~~leaar~l~~~aa~~~d~~~~G~ 350 (481)
T 2yyk_A 281 LNHMAHQVVALKTAKTEAFLGVAALMAEG---IG--ADVYGH-----VQEKIAEIIVYLEAMRAFWTRAEEEAKENAYGL 350 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH---TT--GGGSHH-----HHHHHHHHHHHHHHHHHHHHHHHHTCEECTTSC
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHh---cC--hhhhHH-----HHHHHHHHHHHHHHHHHHHHHHHHcccccccCC
Confidence 78899999999999999999999887764 34 888888 9999999999999999999999999864 32
Q ss_pred --CchHHHHHHHHHHHHHHHHHHH
Q psy5138 214 --PFIKQASMAKYFASVAKLAKET 235 (575)
Q Consensus 214 --~~~~~~~~~~~~~~a~~~~~~~ 235 (575)
+...+.++.| ..+.+.+.+.
T Consensus 351 ~~~~~~~~s~aK--~~a~e~a~~v 372 (481)
T 2yyk_A 351 LVPDRGALDGAR--NLYPRLYPRI 372 (481)
T ss_dssp EECCHHHHHHHH--HHHHHHHHHH
T ss_pred cCccHHHHHHHH--HHHHHHHHHH
Confidence 2344566666 3344444443
No 79
>1u8v_A Gamma-aminobutyrate metabolism dehydratase/isomerase; ALFA-helixes, beta-strands, lyase; HET: FAD; 1.60A {Clostridium aminobutyricum} SCOP: a.29.3.1 e.6.1.1
Probab=99.96 E-value=3.3e-28 Score=255.16 Aligned_cols=211 Identities=14% Similarity=0.153 Sum_probs=165.4
Q ss_pred HHHHHHhhhHhhcCC-ceeEEecCCCCC--------CCc-CCCeeEEEEeCCEEEEeeEEeeeeCCCCCcEEEEEEEecC
Q psy5138 3 TEQKEKYLPRLAQTD-AGSFALSEPGSG--------SDA-FAMKTTATKDGNHYILNGSKMWISNADIANIFLVMANVDV 72 (575)
Q Consensus 3 ~~qk~~~l~~~~~g~-~~~~a~se~~~g--------~~~-~~~~~~a~~~~~g~~l~G~k~~~t~~~~ad~~~v~a~~~~ 72 (575)
++||++|||.+++|+ ++|+++|||+.+ +|+ ..++ ++++++|||+|||.|.|+||+..||+++|+++++.
T Consensus 128 ~eqk~~~L~~l~~Ge~~~a~a~TEP~~~rs~~~~~gSD~~~~~~-~a~r~gdg~vlnG~K~~iT~a~~Ad~~iV~art~~ 206 (490)
T 1u8v_A 128 HKNFTEYLKYIQENDLIVDGAMTDPKGDRGLAPSAQKDPDLFLR-IVEKREDGIVVRGAKAHQTGSINSHEHIIMPTIAM 206 (490)
T ss_dssp HHHHHHHHHHHHHHTCCEEEECCCCCSCTTSCGGGCSSTTSSCE-EEEECSSEEEEEEEECSCTTCTTCSEEEECCSSCC
T ss_pred HHHHHHHHHHHHhCCceeeeeeeCCCCCCcccccccCCcccceE-EEEEECCEEEEEeEEEEeeCCcccCEEEEEEecCC
Confidence 799999999999999 599999999864 564 3344 88899999999999999999999999999998752
Q ss_pred C-CCccceeEEEEecCCCCeEEcc---cCcc----------cCC-CC-CCceeEEeeeeEeCCCCcc--cCCCCcHHHHH
Q psy5138 73 S-KGYRGITCFIVERSMEGFSVGK---KENK----------LGM-KA-SGTCSLHFDNVRVPEENII--SGVGEGYKIAA 134 (575)
Q Consensus 73 ~-~~~~~~~~~~vp~~~~Gv~~~~---~~~~----------~g~-~~-~~~~~v~f~~v~Vp~~~~l--~~~~~g~~~~~ 134 (575)
+ +.....++|+||.++|||++.+ .+.. +|+ +. .+++.|.||||+||++++| |..+.++.+..
T Consensus 207 ~~~~~~~~s~flVp~d~pGv~v~~~r~~~~~~~~~~~~d~~lg~~r~~~~~~~v~FddV~VP~e~vl~~g~~~~g~~~~~ 286 (490)
T 1u8v_A 207 TEADKDYAVSFACPSDADGLFMIYGRQSCDTRKMEEGADIDLGNKQFGGQEALVVFDNVFIPNDRIFLCQEYDFAGMMVE 286 (490)
T ss_dssp CGGGGGGCEEEEEETTCTTEEEEECCCTTGGGGGSTTCCGGGSSSSCCCCCEEEEEEEEEEEGGGEEEESCGGGHHHHHH
T ss_pred CCCCCCeEEEEEEECCCCCEEEEecccccccccccccccCCccccccCCceEEEEECceEeCHHHccCCCChhHHHHHHH
Confidence 2 1223578999999999999954 3433 565 53 5678899999999999998 66667787777
Q ss_pred HhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCccccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhc---
Q psy5138 135 GFLNQGRIGIAAQMTGLAQGCLDATIPYTLERSQVGHRIFDFQACNGGSVQHQISQAVTQVECARLLTYNAARLLEA--- 211 (575)
Q Consensus 135 ~~~~~~~~~~~a~~~G~~~~a~~~a~~~a~~r~~~g~~~~~~q~~~~~~vq~~la~~~~~~~~~~~~~~~a~~~~~~--- 211 (575)
..+.+.++..+++.+|.++.++..+...+.. +| +.++|. +|++|++|.++++++|++++++++..+.
T Consensus 287 ~~~~~~r~~~~a~~~~~~~~~lG~a~~~~~~---~g--i~~~q~-----vq~~laem~~~leaar~l~~~aa~~~d~~~~ 356 (490)
T 1u8v_A 287 RFAGYHRQSYGGCKVGVGDVVIGAAALAADY---NG--AQKASH-----VKDKLIEMTHLNETLYCCGIACSAEGYPTAA 356 (490)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HT--CTTCHH-----HHHHHHHHHHHHHHHHHHHHHHHHTCEECTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cC--chhcHH-----HHHHHHHHHHHHHHHHHHHHHHHHccccccc
Confidence 7777888877776666666666555443322 33 778887 9999999999999999999999999864
Q ss_pred CC--CchHHHHHHHH
Q psy5138 212 GQ--PFIKQASMAKY 224 (575)
Q Consensus 212 ~~--~~~~~~~~~~~ 224 (575)
+. +...+.++.|+
T Consensus 357 g~~~~~~~~~s~aK~ 371 (490)
T 1u8v_A 357 GNYQIDLLLANVCKQ 371 (490)
T ss_dssp SCEECCHHHHHHHHH
T ss_pred CCcCccHHHHHHHHH
Confidence 32 22445566663
No 80
>4g5e_A 2,4,6-trichlorophenol 4-monooxygenase; oxidoreductase; 2.50A {Cupriavidus necator JMP134}
Probab=99.95 E-value=5e-27 Score=245.63 Aligned_cols=291 Identities=11% Similarity=0.026 Sum_probs=220.2
Q ss_pred HHHHhcccc-cCCCceeEEeecCCCCCC-----cccccee-EEEEeCCEEEEeeeeccccCCccccEEEEEEEeCCCCCC
Q psy5138 266 EQKEKYLPR-LAQTDAGSFALSEPGSGS-----DAFAMKT-TATKDGNHYILNGSKMWISNADIANIFLVMANVDVSKGY 338 (575)
Q Consensus 266 ~~~~~~l~~-~~~~~~~~~~~te~~~gs-----~~~~~~~-~a~~~~~g~~l~G~k~~~s~~~~a~~~~v~a~~~~~~~~ 338 (575)
+...+|+.. ...+...+.++++|...- ....+-. .+++.++||+|||.|.|+||+..||+++|++++.+..+.
T Consensus 134 ~n~~~y~~~~~~~DL~~~~a~~dPk~dRs~~~~~q~d~~l~Vve~~~dGiVVnGaK~~~T~a~~Ad~i~V~a~t~~~~~~ 213 (517)
T 4g5e_A 134 KNIVDFVNFAKKHDLNCAPQFVDPQMDRSNPDAQQRSPGLRVIEKNDKGIVVSGVKAIGTGVAFADWIHIGVFFRPGIPG 213 (517)
T ss_dssp HHHHHHHHHHHHHTCCEEEECCCCCC-----------CBCEEEEECSSEEEEEEEEEEEESGGGCSEEEECCCCCTTCCG
T ss_pred HHHHHHHHHHHhcCceeeeeeeCCCCCCCCCchhcCCCceEEEEEcCCeEEEeeEehhhcCccccCEEEEEeecCCCCCc
Confidence 445567777 677888899999986311 1111222 345678999999999999999999999999998766556
Q ss_pred CceEEEEEeCCCCCeeecccCccCCCC---------Ccc-ceeEEEcceeeCCCCcc--cCCCchHHHHHHHHhhhHHHH
Q psy5138 339 RGITCFIVERSMEGFSVGKKENKLGMK---------ASG-TCSLHFDNVRVPEENII--SGVGEGYKIAAGFLNQGRIGI 406 (575)
Q Consensus 339 ~~~~~~lv~~~~~gv~i~~~~~~~G~r---------g~~-s~~l~f~~v~Vp~~~~l--~~~~~~~~~~~~~~~~~r~~~ 406 (575)
.+...|+||+++|||++.......+.+ +.. .+.|.||||+||++++| |+.+.++.+....+...+...
T Consensus 214 d~~~~F~VP~dtPGv~~i~r~~~~~~~~~d~pl~~r~~e~da~vvFDdV~VP~e~Vf~~Ge~~~~~~~~~~~~~~~~~~~ 293 (517)
T 4g5e_A 214 DQIIFAATPVNTPGVTIVCRESVVKEDPIEHPLASQGDELDGMTVFDNVFIPWSHVFHLGNPEHAKLYPQRVFDWLHYHA 293 (517)
T ss_dssp GGCEEEEEETTCTTEEEEECCCCCCSCTTTCTTGGGCCCCEEEEEEEEEEEEGGGEEEESCTTHHHHHHHHHHHHHHHHH
T ss_pred cceEEEEEecCCCCeEEEecccccCCCccccccccccCCcceEEEecceeccHHHccccCChhHHHHHHHHHHHHHHHHH
Confidence 678899999999999996555444433 222 36799999999999987 777878877778888888888
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccccCccCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHc---C--CCcHHHHHHHHH
Q psy5138 407 AAQMTGLAQGCLDATIPYTLERSQFGHRIFDFQSVQHQISQAATQVECARLLTYNAARLLEA---G--QPFIKQASMAKY 481 (575)
Q Consensus 407 ~a~~~G~~~~al~~~~~~~~~r~~~g~~l~~~~~~~~~la~~~~~~~aar~~~~~a~~~~~~---~--~~~~~~~~~ak~ 481 (575)
++..+|.++.++..+..+++.. .+.++|+||++|++|.+.++++|++++.++..... + .|....++++|.
T Consensus 294 ~~~~~~~~~~~~g~a~~~ae~~-----Gi~~fq~Vq~kLaEm~~~~E~~ral~~aaa~~a~~~~~G~~~P~~~~a~~aK~ 368 (517)
T 4g5e_A 294 LIRQSVRAELMAGLAILITEHI-----GTNKIPAVQTRVAKLIGFHQAMLAHIVASEELGFHTPGGAYKPNILIYDFGRA 368 (517)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH-----TCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHTCEECTTCCEECCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHh-----CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCcCcCHHHHHHHHH
Confidence 8888899999999888888653 38899999999999999999999999988875533 2 256778999999
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCcCCcchhhhhhhhcccccccccccccccccccCCC--hHHHHhhhhcccee------
Q psy5138 482 FASEMAGHITRQCIDWMGGLGFTKDYPQEKFYRDCKMAGHITRQCIDWMGGLGFTKDY--PQEKYYRDCKVGTI------ 553 (575)
Q Consensus 482 ~~~~~~~~~~~~~~~~~G~~~~~~~~p~~R~~RD~~~~~~~~~~~~~~~Gg~g~~~~~--~~~~~~rd~~~~~~------ 553 (575)
++++...++++.++|++||.+++ .|.++.|+|......+. +-+ -|.....+. .+-++..|+....+
T Consensus 369 ~a~~~~~rv~~eaiqi~GG~g~~--~Pse~d~~~~~i~~~l~-ky~---~g~~~~aeeR~kl~rL~wD~~~s~fg~R~~l 442 (517)
T 4g5e_A 369 LYLENFSQMIYELVDLSGRSALI--FASEDQWNDEALNGWFE-RMN---NGPVGQPHDRVKIGRVIRDLFLTDWGNRLFV 442 (517)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTTC--CCCHHHHHCTTTHHHHH-HHT---CCSSSCTTHHHHHHHHHHHHHSSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCcccc--CCCHHHhcChhhHHHHH-HHh---CCCCCCHHHHHHHHHHHHHHhcCcchhhHHH
Confidence 99999999999999999999998 58899999887554322 111 122223232 35566667765443
Q ss_pred ----ccchHHHHHHHHHH
Q psy5138 554 ----YEGTSNIQLSTIAK 567 (575)
Q Consensus 554 ----~~G~~~~~~~~i~~ 567 (575)
++|+...++..+.+
T Consensus 443 yE~f~G~p~~~~r~~~~~ 460 (517)
T 4g5e_A 443 FENFNGTPLQAIRMLTMQ 460 (517)
T ss_dssp HTTTSSSCHHHHHHHHTT
T ss_pred HhhccCCCHHHHHHHHHH
Confidence 45555777766544
No 81
>3hwc_A Chlorophenol-4-monooxygenase component 2; beta barrel, helix bundle, oxidoreductase; 2.50A {Burkholderia cepacia}
Probab=99.95 E-value=5.7e-27 Score=244.77 Aligned_cols=210 Identities=14% Similarity=0.127 Sum_probs=155.8
Q ss_pred HHHHHHhhhHhhcCC-ceeEEecCCCC--------CCCcCCCeeEEEEeCCEEEEeeEEeeeeCCCCCcEEEEEEEecC-
Q psy5138 3 TEQKEKYLPRLAQTD-AGSFALSEPGS--------GSDAFAMKTTATKDGNHYILNGSKMWISNADIANIFLVMANVDV- 72 (575)
Q Consensus 3 ~~qk~~~l~~~~~g~-~~~~a~se~~~--------g~~~~~~~~~a~~~~~g~~l~G~k~~~t~~~~ad~~~v~a~~~~- 72 (575)
.+||++|||.+++|+ ++++++|||++ |+|+ .+.+ ..+++|||+|||.|.|+||+..||+++|++++++
T Consensus 132 ~eq~~~~L~~l~~Ge~~~a~AltEP~~~rs~~~~~GSD~-~~~~-~~~~gdg~VlnG~K~~iT~a~~Ad~~lV~a~t~~~ 209 (515)
T 3hwc_A 132 TQNIHNFLKLLREKDLNCPLNFVDPQTDRSSDAAQARSP-NLRI-VEKTDDGIIVNGVKAVGTGIAFGDYMHIGCLYRPG 209 (515)
T ss_dssp HHHHHHHHHHHHHTTCCCCEECCCCCCCCCSCTTTSCCS-BCEE-EEECSSEEEEEEEEEEEESGGGCSEEEECCCCCTT
T ss_pred HHHHHHHHHHHHcCCcEEEEEeeCCCCCcccccccCCCc-ceEE-EEEECCEEEEEEEEEEECCccccCEEEEEEEecCC
Confidence 479999999999999 58999999986 4666 4443 3456899999999999999999999999998732
Q ss_pred CCCccceeEEEEecCCCCeEEcccCcccCC-----CC-----CCceeEEeeeeEeCCCCcc--cCCCCcHHHHHHhhhHH
Q psy5138 73 SKGYRGITCFIVERSMEGFSVGKKENKLGM-----KA-----SGTCSLHFDNVRVPEENII--SGVGEGYKIAAGFLNQG 140 (575)
Q Consensus 73 ~~~~~~~~~~~vp~~~~Gv~~~~~~~~~g~-----~~-----~~~~~v~f~~v~Vp~~~~l--~~~~~g~~~~~~~~~~~ 140 (575)
.++. .+++|+||.++|||++.+.+..+|. +. ..++.|.||||+||++++| |..+.|+.+....+...
T Consensus 210 ~~~~-~~s~FlVp~d~pGv~v~~~~~~~G~~~~d~~ls~~~~~~~a~v~FddV~VP~e~vl~~Ge~g~g~~~~~~~~~~~ 288 (515)
T 3hwc_A 210 IPGE-QVIFAAIPTNTPGVTVFCRESTVKNDPAEHPLASQGDELDSTTVFDNVFIPWEQVFHIGNPEHAKLYPQRIFDWV 288 (515)
T ss_dssp CCGG-GCEEEEEETTCTTEEEEECCCCCCSCTTTCTTTTSCCCCEEEEEEEEEEEEGGGEEEESCTTGGGTHHHHHHHHH
T ss_pred CCCC-eEEEEEEECCCCCeEEeecccccCccccccccccccCCceEEEEECceEECHHHccCCCCccHHHHHHHHHHHHH
Confidence 2222 3899999999999999877777662 22 2378999999999999999 77788876653333332
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhcccCccccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhc---CC--Cc
Q psy5138 141 RIGIAAQMTGLAQGCLDATIPYTLERSQVGHRIFDFQACNGGSVQHQISQAVTQVECARLLTYNAARLLEA---GQ--PF 215 (575)
Q Consensus 141 ~~~~~a~~~G~~~~a~~~a~~~a~~r~~~g~~~~~~q~~~~~~vq~~la~~~~~~~~~~~~~~~a~~~~~~---~~--~~ 215 (575)
+....+..+|.+..++..+..++.. +| |++||+ ||++|++|.++++++|++++++++..+. +. +.
T Consensus 289 ~r~~~~~~~~~a~~~lG~A~~~~e~---~g--I~~fQ~-----Vq~kLAem~~~lEaaR~l~~~Aa~~~d~~~~G~~~p~ 358 (515)
T 3hwc_A 289 HYHILIRQVLRAELIVGLAILITEH---IG--TSKLPT-----VSARVAKLVAFHLAMQAHLIASEETGFHTKGGRYKPN 358 (515)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH---HT--CTTSHH-----HHHHHHHHHHHHHHHHHHHHHHHHTCEECTTCCEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH---cC--CcccHH-----HHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCC
Confidence 2111123344444444444333322 33 889998 9999999999999999999999998875 32 33
Q ss_pred hHHHHHHHHH
Q psy5138 216 IKQASMAKYF 225 (575)
Q Consensus 216 ~~~~~~~~~~ 225 (575)
..+.++.|++
T Consensus 359 ~~~as~AK~~ 368 (515)
T 3hwc_A 359 PLIYDFGRAH 368 (515)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 4556777743
No 82
>4g5e_A 2,4,6-trichlorophenol 4-monooxygenase; oxidoreductase; 2.50A {Cupriavidus necator JMP134}
Probab=99.88 E-value=3.7e-21 Score=201.34 Aligned_cols=195 Identities=11% Similarity=0.028 Sum_probs=156.1
Q ss_pred HHHHhhhHhhcCCc-eeEEecCCCCC-----CCcCCCee-EEEEeCCEEEEeeEEeeeeCCCCCcEEEEEEEecCCCCcc
Q psy5138 5 QKEKYLPRLAQTDA-GSFALSEPGSG-----SDAFAMKT-TATKDGNHYILNGSKMWISNADIANIFLVMANVDVSKGYR 77 (575)
Q Consensus 5 qk~~~l~~~~~g~~-~~~a~se~~~g-----~~~~~~~~-~a~~~~~g~~l~G~k~~~t~~~~ad~~~v~a~~~~~~~~~ 77 (575)
-..+|+..+.++++ .+.++++|... +...++-. ..+++++||+|||.|.|+||+..||+++|+++++...+.+
T Consensus 135 n~~~y~~~~~~~DL~~~~a~~dPk~dRs~~~~~q~d~~l~Vve~~~dGiVVnGaK~~~T~a~~Ad~i~V~a~t~~~~~~d 214 (517)
T 4g5e_A 135 NIVDFVNFAKKHDLNCAPQFVDPQMDRSNPDAQQRSPGLRVIEKNDKGIVVSGVKAIGTGVAFADWIHIGVFFRPGIPGD 214 (517)
T ss_dssp HHHHHHHHHHHHTCCEEEECCCCCC-----------CBCEEEEECSSEEEEEEEEEEEESGGGCSEEEECCCCCTTCCGG
T ss_pred HHHHHHHHHHhcCceeeeeeeCCCCCCCCCchhcCCCceEEEEEcCCeEEEeeEehhhcCccccCEEEEEeecCCCCCcc
Confidence 34679999999995 89999999631 11112222 3456789999999999999999999999999876555556
Q ss_pred ceeEEEEecCCCCeEEcccCcccCCCCC----------CceeEEeeeeEeCCCCcc--cCCCCcHHHHHHhhhHHHHHHH
Q psy5138 78 GITCFIVERSMEGFSVGKKENKLGMKAS----------GTCSLHFDNVRVPEENII--SGVGEGYKIAAGFLNQGRIGIA 145 (575)
Q Consensus 78 ~~~~~~vp~~~~Gv~~~~~~~~~g~~~~----------~~~~v~f~~v~Vp~~~~l--~~~~~g~~~~~~~~~~~~~~~~ 145 (575)
..+.|+||.++|||++++..+..+.+.. ..+.|.||||+||+++++ |..+.++.+....+...+...+
T Consensus 215 ~~~~F~VP~dtPGv~~i~r~~~~~~~~~d~pl~~r~~e~da~vvFDdV~VP~e~Vf~~Ge~~~~~~~~~~~~~~~~~~~~ 294 (517)
T 4g5e_A 215 QIIFAATPVNTPGVTIVCRESVVKEDPIEHPLASQGDELDGMTVFDNVFIPWSHVFHLGNPEHAKLYPQRVFDWLHYHAL 294 (517)
T ss_dssp GCEEEEEETTCTTEEEEECCCCCCSCTTTCTTGGGCCCCEEEEEEEEEEEEGGGEEEESCTTHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEecCCCCeEEEecccccCCCccccccccccCCcceEEEecceeccHHHccccCChhHHHHHHHHHHHHHHHHHH
Confidence 7889999999999999876665554432 236799999999999987 7777777777777888888888
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcccCccccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy5138 146 AQMTGLAQGCLDATIPYTLERSQVGHRIFDFQACNGGSVQHQISQAVTQVECARLLTYNAARLL 209 (575)
Q Consensus 146 a~~~G~~~~a~~~a~~~a~~r~~~g~~~~~~q~~~~~~vq~~la~~~~~~~~~~~~~~~a~~~~ 209 (575)
+..+|.++.++..+..+++.. | +.+||+ ||++|++|.+.+|+++++++.++..-
T Consensus 295 ~~~~~~~~~~~g~a~~~ae~~---G--i~~fq~-----Vq~kLaEm~~~~E~~ral~~aaa~~a 348 (517)
T 4g5e_A 295 IRQSVRAELMAGLAILITEHI---G--TNKIPA-----VQTRVAKLIGFHQAMLAHIVASEELG 348 (517)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH---T--CTTSHH-----HHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHh---C--CcccHH-----HHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 888888888888888887653 3 788988 99999999999999999999888754
Done!