BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5139
(216 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5EAD4|ACDSB_BOVIN Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial
OS=Bos taurus GN=ACADSB PE=2 SV=1
Length = 432
Score = 89.7 bits (221), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 55/76 (72%)
Query: 68 LAQTDLMGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTT 127
L Q LMG+EI +YGG G SF + +L++EE+A+VD SV+++ DIQNTL+N +I K GT
Sbjct: 97 LFQQGLMGIEIDTKYGGTGASFFSSVLVIEELAKVDASVALVCDIQNTLINRMIGKYGTE 156
Query: 128 EQKEKYLPRLAQTDVS 143
EQK YLP+LA S
Sbjct: 157 EQKATYLPKLATEKAS 172
Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 56/81 (69%)
Query: 4 LLGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEK 63
L+G+EI +YGG G SF + +L++EE+A+VD SV+++ DIQNTL+N +I K GT EQK
Sbjct: 102 LMGIEIDTKYGGTGASFFSSVLVIEELAKVDASVALVCDIQNTLINRMIGKYGTEEQKAT 161
Query: 64 YLPRLAQTDLMGVEIPQEYGG 84
YLP+LA + I + G
Sbjct: 162 YLPKLATEKASSICISETGAG 182
>sp|P45954|ACDSB_HUMAN Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial
OS=Homo sapiens GN=ACADSB PE=1 SV=1
Length = 432
Score = 87.0 bits (214), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 54/75 (72%)
Query: 68 LAQTDLMGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTT 127
L Q LMG+E+ EYGG G SF++ +L++EE+A+VD SV++ +IQNTL+N LI K GT
Sbjct: 97 LFQQGLMGIEVDPEYGGTGASFLSTVLVIEELAKVDASVAVFCEIQNTLINTLIRKHGTE 156
Query: 128 EQKEKYLPRLAQTDV 142
EQK YLP+L V
Sbjct: 157 EQKATYLPQLTTEKV 171
Score = 84.3 bits (207), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 59/86 (68%), Gaps = 1/86 (1%)
Query: 4 LLGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEK 63
L+G+E+ EYGG G SF++ +L++EE+A+VD SV++ +IQNTL+N LI K GT EQK
Sbjct: 102 LMGIEVDPEYGGTGASFLSTVLVIEELAKVDASVAVFCEIQNTLINTLIRKHGTEEQKAT 161
Query: 64 YLPRLAQTDLMGVEIPQEYGGPGLSF 89
YLP+L T+ +G E G SF
Sbjct: 162 YLPQLT-TEKVGSFCLSEAGAGSDSF 186
>sp|Q54RR5|ACDSB_DICDI Probable short/branched chain specific acyl-CoA dehydrogenase
OS=Dictyostelium discoideum GN=acadsb PE=3 SV=1
Length = 413
Score = 87.0 bits (214), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 60/86 (69%)
Query: 57 TTEQKEKYLPRLAQTDLMGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTL 116
T+E + L L +LMG++I YGG ++FM I+ +EE+A+VDP++S++VD+QNTL
Sbjct: 64 TSELNKGLLKDLFDMNLMGIDISDSYGGANMNFMGSIIAIEELAKVDPAISVIVDVQNTL 123
Query: 117 VNDLIIKLGTTEQKEKYLPRLAQTDV 142
VN+ I + G+ +Q+EKYL LA V
Sbjct: 124 VNNCINRYGSIQQREKYLSMLATNTV 149
Score = 82.0 bits (201), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 60/87 (68%), Gaps = 1/87 (1%)
Query: 3 TLLGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKE 62
L+G++I YGG ++FM I+ +EE+A+VDP++S++VD+QNTLVN+ I + G+ +Q+E
Sbjct: 79 NLMGIDISDSYGGANMNFMGSIIAIEELAKVDPAISVIVDVQNTLVNNCINRYGSIQQRE 138
Query: 63 KYLPRLAQTDLMGVEIPQEYGGPGLSF 89
KYL LA T+ +G E G +F
Sbjct: 139 KYLSMLA-TNTVGSFCLSESGSGSDAF 164
>sp|Q5RF40|ACDSB_PONAB Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial
OS=Pongo abelii GN=ACADSB PE=2 SV=1
Length = 432
Score = 86.3 bits (212), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 54/75 (72%)
Query: 68 LAQTDLMGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTT 127
L Q LMG+E+ EYGG G SF++ +L++EE+A+VD SV++ +IQNTL+N LI K GT
Sbjct: 97 LFQQGLMGIEVDPEYGGTGASFLSTVLVIEELAKVDASVAVFCEIQNTLINTLIRKHGTE 156
Query: 128 EQKEKYLPRLAQTDV 142
EQK YLP+L V
Sbjct: 157 EQKGTYLPQLTTEKV 171
Score = 83.6 bits (205), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 59/86 (68%), Gaps = 1/86 (1%)
Query: 4 LLGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEK 63
L+G+E+ EYGG G SF++ +L++EE+A+VD SV++ +IQNTL+N LI K GT EQK
Sbjct: 102 LMGIEVDPEYGGTGASFLSTVLVIEELAKVDASVAVFCEIQNTLINTLIRKHGTEEQKGT 161
Query: 64 YLPRLAQTDLMGVEIPQEYGGPGLSF 89
YLP+L T+ +G E G SF
Sbjct: 162 YLPQLT-TEKVGSFCLSEAGAGSDSF 186
>sp|P70584|ACDSB_RAT Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial
OS=Rattus norvegicus GN=Acadsb PE=1 SV=1
Length = 432
Score = 82.8 bits (203), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 51/70 (72%)
Query: 68 LAQTDLMGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTT 127
L Q +MG+E+ +YGG SF+ +L++EE+A+VD SV++L DIQNT++N L K GT
Sbjct: 97 LFQQGMMGIEVEAKYGGTEASFLCSVLVIEELAKVDASVALLCDIQNTVINKLFRKHGTE 156
Query: 128 EQKEKYLPRL 137
EQK YLP+L
Sbjct: 157 EQKATYLPKL 166
Score = 81.3 bits (199), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 57/86 (66%), Gaps = 1/86 (1%)
Query: 4 LLGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEK 63
++G+E+ +YGG SF+ +L++EE+A+VD SV++L DIQNT++N L K GT EQK
Sbjct: 102 MMGIEVEAKYGGTEASFLCSVLVIEELAKVDASVALLCDIQNTVINKLFRKHGTEEQKAT 161
Query: 64 YLPRLAQTDLMGVEIPQEYGGPGLSF 89
YLP+L T+ +G E G SF
Sbjct: 162 YLPKLV-TEKLGSFCLSEAGAGSDSF 186
>sp|Q9DBL1|ACDSB_MOUSE Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial
OS=Mus musculus GN=Acadsb PE=1 SV=1
Length = 432
Score = 80.5 bits (197), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 50/70 (71%)
Query: 68 LAQTDLMGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTT 127
L Q LMG+E+ +YGG SF +L++EE+A+VD SV++L DIQNT++N+L K +
Sbjct: 97 LFQQGLMGIEVEAQYGGTEASFFCSVLVIEELAKVDASVALLCDIQNTIINNLFRKHASE 156
Query: 128 EQKEKYLPRL 137
EQK YLP+L
Sbjct: 157 EQKATYLPKL 166
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Query: 4 LLGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEK 63
L+G+E+ +YGG SF +L++EE+A+VD SV++L DIQNT++N+L K + EQK
Sbjct: 102 LMGIEVEAQYGGTEASFFCSVLVIEELAKVDASVALLCDIQNTIINNLFRKHASEEQKAT 161
Query: 64 YLPRLAQTDLMGVEIPQEYGGPGLSF 89
YLP+L T+ +G E G SF
Sbjct: 162 YLPKLV-TEKLGSFCLSEAGAGSDSF 186
>sp|P45857|ACDB_BACSU Acyl-CoA dehydrogenase OS=Bacillus subtilis (strain 168) GN=mmgC
PE=2 SV=3
Length = 379
Score = 63.9 bits (154), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 48/77 (62%)
Query: 65 LPRLAQTDLMGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKL 124
+ ++ + LMG+ +P++YGG G ++ IL + EI+R+ +V +++ + ++ + I+
Sbjct: 40 IKKMGKHGLMGIPVPEQYGGAGADVVSYILAIHEISRISAAVGVILSVHTSVGTNPILYF 99
Query: 125 GTTEQKEKYLPRLAQTD 141
G EQK KY+P LA D
Sbjct: 100 GNEEQKMKYIPNLASGD 116
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 46/73 (63%)
Query: 4 LLGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEK 63
L+G+ +P++YGG G ++ IL + EI+R+ +V +++ + ++ + I+ G EQK K
Sbjct: 48 LMGIPVPEQYGGAGADVVSYILAIHEISRISAAVGVILSVHTSVGTNPILYFGNEEQKMK 107
Query: 64 YLPRLAQTDLMGV 76
Y+P LA D +G
Sbjct: 108 YIPNLASGDHLGA 120
>sp|Q3SZI8|IVD_BOVIN Isovaleryl-CoA dehydrogenase, mitochondrial OS=Bos taurus GN=IVD
PE=2 SV=1
Length = 426
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 46/73 (63%)
Query: 4 LLGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEK 63
+LG+ P +YGG GL F+ ++L++EEI+RV +V + + L + I++ G QKEK
Sbjct: 92 VLGITAPVQYGGSGLGFLENVLVMEEISRVSGAVGLSYGAHSNLCINQIVRNGNETQKEK 151
Query: 64 YLPRLAQTDLMGV 76
YLP+L + +G
Sbjct: 152 YLPKLISGEYIGA 164
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 47/76 (61%)
Query: 62 EKYLPRLAQTDLMGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLI 121
++ +L ++G+ P +YGG GL F+ ++L++EEI+RV +V + + L + I
Sbjct: 81 REFWKQLGNLGVLGITAPVQYGGSGLGFLENVLVMEEISRVSGAVGLSYGAHSNLCINQI 140
Query: 122 IKLGTTEQKEKYLPRL 137
++ G QKEKYLP+L
Sbjct: 141 VRNGNETQKEKYLPKL 156
>sp|P12007|IVD_RAT Isovaleryl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus
GN=Ivd PE=1 SV=2
Length = 424
Score = 60.8 bits (146), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 44/73 (60%)
Query: 4 LLGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEK 63
+LG+ P +YGG GL ++ +L++EEI+R +V + + L + I++ G QKEK
Sbjct: 90 VLGITAPVQYGGSGLGYLEHVLVMEEISRASAAVGLSYGAHSNLCINQIVRNGNEAQKEK 149
Query: 64 YLPRLAQTDLMGV 76
YLP+L + +G
Sbjct: 150 YLPKLISGEFIGA 162
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 45/76 (59%)
Query: 62 EKYLPRLAQTDLMGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLI 121
++ +L ++G+ P +YGG GL ++ +L++EEI+R +V + + L + I
Sbjct: 79 REFWKQLGSLGVLGITAPVQYGGSGLGYLEHVLVMEEISRASAAVGLSYGAHSNLCINQI 138
Query: 122 IKLGTTEQKEKYLPRL 137
++ G QKEKYLP+L
Sbjct: 139 VRNGNEAQKEKYLPKL 154
>sp|Q9JHI5|IVD_MOUSE Isovaleryl-CoA dehydrogenase, mitochondrial OS=Mus musculus GN=Ivd
PE=1 SV=1
Length = 424
Score = 60.5 bits (145), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 44/73 (60%)
Query: 4 LLGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEK 63
+LG+ P +YGG GL ++ +L++EEI+R +V + + L + I++ G QKEK
Sbjct: 90 VLGITAPVQYGGSGLGYLEHVLVMEEISRASGAVGLSYGAHSNLCVNQIVRNGNEAQKEK 149
Query: 64 YLPRLAQTDLMGV 76
YLP+L + +G
Sbjct: 150 YLPKLISGEFIGA 162
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 45/76 (59%)
Query: 62 EKYLPRLAQTDLMGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLI 121
++ +L ++G+ P +YGG GL ++ +L++EEI+R +V + + L + I
Sbjct: 79 REFWKQLGSLGVLGITAPVQYGGSGLGYLEHVLVMEEISRASGAVGLSYGAHSNLCVNQI 138
Query: 122 IKLGTTEQKEKYLPRL 137
++ G QKEKYLP+L
Sbjct: 139 VRNGNEAQKEKYLPKL 154
>sp|P26440|IVD_HUMAN Isovaleryl-CoA dehydrogenase, mitochondrial OS=Homo sapiens GN=IVD
PE=1 SV=1
Length = 423
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 44/73 (60%)
Query: 4 LLGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEK 63
+LG+ P +YGG GL ++ +L++EEI+R +V + + L + +++ G QKEK
Sbjct: 89 VLGITAPVQYGGSGLGYLEHVLVMEEISRASGAVGLSYGAHSNLCINQLVRNGNEAQKEK 148
Query: 64 YLPRLAQTDLMGV 76
YLP+L + +G
Sbjct: 149 YLPKLISGEYIGA 161
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 45/76 (59%)
Query: 62 EKYLPRLAQTDLMGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLI 121
++ +L ++G+ P +YGG GL ++ +L++EEI+R +V + + L + +
Sbjct: 78 REFWKQLGNLGVLGITAPVQYGGSGLGYLEHVLVMEEISRASGAVGLSYGAHSNLCINQL 137
Query: 122 IKLGTTEQKEKYLPRL 137
++ G QKEKYLP+L
Sbjct: 138 VRNGNEAQKEKYLPKL 153
>sp|Q5RBD5|IVD_PONAB Isovaleryl-CoA dehydrogenase, mitochondrial OS=Pongo abelii GN=IVD
PE=2 SV=1
Length = 423
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 44/73 (60%)
Query: 4 LLGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEK 63
+LG+ P +YGG GL ++ +L++EEI+R +V + + L + +++ G QKEK
Sbjct: 89 VLGITAPVQYGGSGLGYLEHVLVMEEISRASGAVGLSYGAHSNLCINQLVRNGNEAQKEK 148
Query: 64 YLPRLAQTDLMGV 76
YLP+L + +G
Sbjct: 149 YLPKLISGEYIGA 161
Score = 58.9 bits (141), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 45/76 (59%)
Query: 62 EKYLPRLAQTDLMGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLI 121
++ +L ++G+ P +YGG GL ++ +L++EEI+R +V + + L + +
Sbjct: 78 REFWKQLGNLGVLGITAPVQYGGSGLGYLEHVLVMEEISRASGAVGLSYGAHSNLCINQL 137
Query: 122 IKLGTTEQKEKYLPRL 137
++ G QKEKYLP+L
Sbjct: 138 VRNGNEAQKEKYLPKL 153
>sp|Q9FS88|IVD1_SOLTU Isovaleryl-CoA dehydrogenase 1, mitochondrial OS=Solanum tuberosum
GN=IVD1 PE=2 SV=1
Length = 412
Score = 58.9 bits (141), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 46/74 (62%)
Query: 3 TLLGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKE 62
L G+ P+EYGG L ++ + +EEI+R +V++ +Q+ + + +++ GT +QK+
Sbjct: 80 NLHGITAPEEYGGLNLGYLYHCIALEEISRASGAVAVSYGVQSNVCINQLVRNGTPDQKQ 139
Query: 63 KYLPRLAQTDLMGV 76
KYLP+L D +G
Sbjct: 140 KYLPKLISGDHIGA 153
Score = 58.2 bits (139), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 45/70 (64%)
Query: 72 DLMGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKE 131
+L G+ P+EYGG L ++ + +EEI+R +V++ +Q+ + + +++ GT +QK+
Sbjct: 80 NLHGITAPEEYGGLNLGYLYHCIALEEISRASGAVAVSYGVQSNVCINQLVRNGTPDQKQ 139
Query: 132 KYLPRLAQTD 141
KYLP+L D
Sbjct: 140 KYLPKLISGD 149
>sp|Q96329|ACOX4_ARATH Acyl-coenzyme A oxidase 4, peroxisomal OS=Arabidopsis thaliana
GN=ACX4 PE=1 SV=1
Length = 436
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 66 PRLAQTDLMGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLG 125
P+L + G I + YG PGLS + + EIARVD S S + + ++L I G
Sbjct: 93 PKLGAMGVAGGSI-KGYGCPGLSITANAIATAEIARVDASCSTFILVHSSLGMLTIALCG 151
Query: 126 TTEQKEKYLPRLAQ 139
+ QKEKYLP LAQ
Sbjct: 152 SEAQKEKYLPSLAQ 165
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 34/58 (58%)
Query: 13 YGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEKYLPRLAQ 70
YG PGLS + + EIARVD S S + + ++L I G+ QKEKYLP LAQ
Sbjct: 108 YGCPGLSITANAIATAEIARVDASCSTFILVHSSLGMLTIALCGSEAQKEKYLPSLAQ 165
>sp|P52042|ACDS_CLOAB Acyl-CoA dehydrogenase, short-chain specific OS=Clostridium
acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 /
LMG 5710 / VKM B-1787) GN=bcd PE=3 SV=1
Length = 379
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 47/77 (61%)
Query: 65 LPRLAQTDLMGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKL 124
+ ++ Q +MG+ +EYGG G ++ I+ VEE+++V + +++ +L LI +
Sbjct: 42 VKKMGQYGMMGIPFSKEYGGAGGDVLSYIIAVEELSKVCGTTGVILSAHTSLCASLINEH 101
Query: 125 GTTEQKEKYLPRLAQTD 141
GT EQK+KYL LA+ +
Sbjct: 102 GTEEQKQKYLVPLAKGE 118
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 45/73 (61%)
Query: 4 LLGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEK 63
++G+ +EYGG G ++ I+ VEE+++V + +++ +L LI + GT EQK+K
Sbjct: 50 MMGIPFSKEYGGAGGDVLSYIIAVEELSKVCGTTGVILSAHTSLCASLINEHGTEEQKQK 109
Query: 64 YLPRLAQTDLMGV 76
YL LA+ + +G
Sbjct: 110 YLVPLAKGEKIGA 122
>sp|Q5RAS0|ACADS_PONAB Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Pongo
abelii GN=ACADS PE=2 SV=1
Length = 412
Score = 54.7 bits (130), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 44/73 (60%)
Query: 4 LLGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEK 63
LL +++P+E GG GL ++ + +EEI+R S +++ + N+L I+K G+ EQK+K
Sbjct: 79 LLAMDVPEELGGAGLDYLAYAIAMEEISRGCASTGVIMSVNNSLYLGPILKFGSKEQKQK 138
Query: 64 YLPRLAQTDLMGV 76
++ D +G
Sbjct: 139 WVTPFTSGDKIGC 151
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Query: 61 KEKYLP-----RLAQTDLMGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNT 115
KE P ++ L+ +++P+E GG GL ++ + +EEI+R S +++ + N+
Sbjct: 62 KEHLFPAAQVKKMGGLGLLAMDVPEELGGAGLDYLAYAIAMEEISRGCASTGVIMSVNNS 121
Query: 116 LVNDLIIKLGTTEQKEKYL 134
L I+K G+ EQK+K++
Sbjct: 122 LYLGPILKFGSKEQKQKWV 140
>sp|Q2KHZ9|GCDH_BOVIN Glutaryl-CoA dehydrogenase, mitochondrial OS=Bos taurus GN=GCDH
PE=2 SV=1
Length = 438
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 65/131 (49%), Gaps = 12/131 (9%)
Query: 4 LLGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEK 63
+LG I Q Y G+S + L+ E+ RVD + +Q++LV I G+ EQK+K
Sbjct: 105 MLGPTI-QGYSCAGVSSVAYGLLARELERVDSGYRSAMSVQSSLVMYPIYAYGSEEQKQK 163
Query: 64 YLPRLAQTDLMGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILV------DIQNTLV 117
YLPRLA+ +L+G +G + +D +E AR +PS + I N+ V
Sbjct: 164 YLPRLAKGELLGC-----FGLTEPNHGSDPSGMETRARHNPSSRSYILSGSKTWITNSPV 218
Query: 118 NDLIIKLGTTE 128
DL+I E
Sbjct: 219 ADLLIVWARCE 229
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 37/63 (58%)
Query: 80 QEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEKYLPRLAQ 139
Q Y G+S + L+ E+ RVD + +Q++LV I G+ EQK+KYLPRLA+
Sbjct: 111 QGYSCAGVSSVAYGLLARELERVDSGYRSAMSVQSSLVMYPIYAYGSEEQKQKYLPRLAK 170
Query: 140 TDV 142
++
Sbjct: 171 GEL 173
>sp|P16219|ACADS_HUMAN Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Homo
sapiens GN=ACADS PE=1 SV=1
Length = 412
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 43/73 (58%)
Query: 4 LLGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEK 63
LL +++P+E GG GL ++ + +EEI+R S +++ + N+L I+K G+ EQK+
Sbjct: 79 LLAMDVPEELGGAGLDYLAYAIAMEEISRGCASTGVIMSVNNSLYLGPILKFGSKEQKQA 138
Query: 64 YLPRLAQTDLMGV 76
++ D +G
Sbjct: 139 WVTPFTSGDKIGC 151
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 61 KEKYLP-----RLAQTDLMGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNT 115
KE P ++ L+ +++P+E GG GL ++ + +EEI+R S +++ + N+
Sbjct: 62 KEHLFPAAQVKKMGGLGLLAMDVPEELGGAGLDYLAYAIAMEEISRGCASTGVIMSVNNS 121
Query: 116 LVNDLIIKLGTTEQKEKYLPRLAQTD 141
L I+K G+ EQK+ ++ D
Sbjct: 122 LYLGPILKFGSKEQKQAWVTPFTSGD 147
>sp|P63427|ACDP_MYCTU Probable acyl-CoA dehydrogenase fadE25 OS=Mycobacterium
tuberculosis GN=fadE25 PE=3 SV=1
Length = 389
Score = 51.6 bits (122), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 62 EKYLPRLAQTDLMGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLI 121
E+ L L + V IP+EYGG G + +++EE+ARVD S S++ + LI
Sbjct: 49 EEALVALNSSGFNAVHIPEEYGGQGADSVATCIVIEEVARVDASASLIPAVNKLGTMGLI 108
Query: 122 IKLGTTEQKEKYLPRLA 138
++ G+ E K++ LP LA
Sbjct: 109 LR-GSEELKKQVLPALA 124
Score = 50.4 bits (119), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 7 VEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEKYLP 66
V IP+EYGG G + +++EE+ARVD S S++ + LI++ G+ E K++ LP
Sbjct: 63 VHIPEEYGGQGADSVATCIVIEEVARVDASASLIPAVNKLGTMGLILR-GSEELKKQVLP 121
Query: 67 RLAQTDLM 74
LA M
Sbjct: 122 ALAAEGAM 129
>sp|P63428|ACDP_MYCBO Probable acyl-CoA dehydrogenase fadE25 OS=Mycobacterium bovis
(strain ATCC BAA-935 / AF2122/97) GN=fadE25 PE=3 SV=1
Length = 389
Score = 51.6 bits (122), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 62 EKYLPRLAQTDLMGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLI 121
E+ L L + V IP+EYGG G + +++EE+ARVD S S++ + LI
Sbjct: 49 EEALVALNSSGFNAVHIPEEYGGQGADSVATCIVIEEVARVDASASLIPAVNKLGTMGLI 108
Query: 122 IKLGTTEQKEKYLPRLA 138
++ G+ E K++ LP LA
Sbjct: 109 LR-GSEELKKQVLPALA 124
Score = 50.4 bits (119), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 7 VEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEKYLP 66
V IP+EYGG G + +++EE+ARVD S S++ + LI++ G+ E K++ LP
Sbjct: 63 VHIPEEYGGQGADSVATCIVIEEVARVDASASLIPAVNKLGTMGLILR-GSEELKKQVLP 121
Query: 67 RLAQTDLM 74
LA M
Sbjct: 122 ALAAEGAM 129
>sp|Q3ZBF6|ACADS_BOVIN Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Bos
taurus GN=ACADS PE=2 SV=1
Length = 412
Score = 51.6 bits (122), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 61 KEKYLP-----RLAQTDLMGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNT 115
KE P ++ + LM + +P+E G GL ++ + +EEI+R S +++ + N+
Sbjct: 62 KEHRFPAAQVKKMGELGLMAMNVPEELSGAGLDYLAYSIAMEEISRGCASTGVIMSVNNS 121
Query: 116 LVNDLIIKLGTTEQKEKYLPRLAQTD 141
L I+K GT EQK++++ D
Sbjct: 122 LYLGPILKFGTKEQKQQWVAPFTSGD 147
Score = 50.4 bits (119), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 42/73 (57%)
Query: 4 LLGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEK 63
L+ + +P+E G GL ++ + +EEI+R S +++ + N+L I+K GT EQK++
Sbjct: 79 LMAMNVPEELSGAGLDYLAYSIAMEEISRGCASTGVIMSVNNSLYLGPILKFGTKEQKQQ 138
Query: 64 YLPRLAQTDLMGV 76
++ D +G
Sbjct: 139 WVAPFTSGDKIGC 151
>sp|Q8HXX8|GCDH_MACFA Glutaryl-CoA dehydrogenase, mitochondrial OS=Macaca fascicularis
GN=GCDH PE=2 SV=1
Length = 438
Score = 51.6 bits (122), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
Query: 5 LGVEIP--QEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKE 62
LGV P + YG G+S + L+ E+ RVD + +Q+ LV I G+ EQ++
Sbjct: 103 LGVLGPTIKGYGCAGVSSVAYGLLARELERVDSGYRSAMSVQSPLVMHPIYAYGSEEQRQ 162
Query: 63 KYLPRLAQTDLMGV 76
KYLPRLA+ +L+G
Sbjct: 163 KYLPRLAKGELLGC 176
Score = 47.8 bits (112), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Query: 68 LAQTDLMGVEIP--QEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLG 125
++Q +GV P + YG G+S + L+ E+ RVD + +Q+ LV I G
Sbjct: 97 ISQMGELGVLGPTIKGYGCAGVSSVAYGLLARELERVDSGYRSAMSVQSPLVMHPIYAYG 156
Query: 126 TTEQKEKYLPRLAQTDV 142
+ EQ++KYLPRLA+ ++
Sbjct: 157 SEEQRQKYLPRLAKGEL 173
>sp|Q54IM8|ACAD8_DICDI Isobutyryl-CoA dehydrogenase, mitochondrial OS=Dictyostelium
discoideum GN=acad8 PE=3 SV=1
Length = 416
Score = 51.6 bits (122), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 6/82 (7%)
Query: 61 KEKYLPR-----LAQTDLMGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNT 115
KE+Y PR A+ G+ + ++ GG GLS + +I+E +A D S + + I N
Sbjct: 67 KEEYFPRDVMREAAELGFGGIYVREDVGGSGLSRLDASIIIEALASADVSTTAFISIHN- 125
Query: 116 LVNDLIIKLGTTEQKEKYLPRL 137
+ LI GT EQ++K+LP L
Sbjct: 126 MCAGLIDIYGTEEQRKKFLPSL 147
Score = 44.7 bits (104), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 6 GVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEKYL 65
G+ + ++ GG GLS + +I+E +A D S + + I N + LI GT EQ++K+L
Sbjct: 86 GIYVREDVGGSGLSRLDASIIIEALASADVSTTAFISIHN-MCAGLIDIYGTEEQRKKFL 144
Query: 66 PRL 68
P L
Sbjct: 145 PSL 147
>sp|P46703|ACDP_MYCLE Probable acyl-CoA dehydrogenase fadE25 OS=Mycobacterium leprae
(strain TN) GN=fadE25 PE=3 SV=1
Length = 389
Score = 51.2 bits (121), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 62 EKYLPRLAQTDLMGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLI 121
E+ L L + + +P+EYGG G + +++EE+ARVD S S++ + LI
Sbjct: 49 EEALAALNASGFNAIHVPEEYGGQGADSVAACIVIEEVARVDASASLIPAVNKLGTMGLI 108
Query: 122 IKLGTTEQKEKYLPRLA 138
++ G+ E K++ LP LA
Sbjct: 109 LR-GSEELKKQVLPSLA 124
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 7 VEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEKYLP 66
+ +P+EYGG G + +++EE+ARVD S S++ + LI++ G+ E K++ LP
Sbjct: 63 IHVPEEYGGQGADSVAACIVIEEVARVDASASLIPAVNKLGTMGLILR-GSEELKKQVLP 121
Query: 67 RLAQTDLM 74
LA M
Sbjct: 122 SLAAEGAM 129
>sp|Q60759|GCDH_MOUSE Glutaryl-CoA dehydrogenase, mitochondrial OS=Mus musculus GN=Gcdh
PE=2 SV=2
Length = 438
Score = 50.8 bits (120), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 64/132 (48%), Gaps = 13/132 (9%)
Query: 5 LGVEIP--QEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKE 62
LGV P + YG G+S + L+ E+ RVD ++ +Q++LV I G+ EQ++
Sbjct: 103 LGVLGPTIKGYGCAGVSSVAYGLLTRELERVDSGYRSMMSVQSSLVMHPIYTYGSEEQRQ 162
Query: 63 KYLPRLAQTDLMGVEIPQEYGGPGLSFMTDILIVEEIARVDPS------VSILVDIQNTL 116
KYLP LA+ +L+G +G + +D +E AR +PS I N+
Sbjct: 163 KYLPGLAKGELLGC-----FGLTEPNHGSDPGGMETRARHNPSNQSYTLSGTKTWITNSP 217
Query: 117 VNDLIIKLGTTE 128
V DL I E
Sbjct: 218 VADLFIVWARCE 229
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 37/61 (60%)
Query: 82 YGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEKYLPRLAQTD 141
YG G+S + L+ E+ RVD ++ +Q++LV I G+ EQ++KYLP LA+ +
Sbjct: 113 YGCAGVSSVAYGLLTRELERVDSGYRSMMSVQSSLVMHPIYTYGSEEQRQKYLPGLAKGE 172
Query: 142 V 142
+
Sbjct: 173 L 173
>sp|Q92947|GCDH_HUMAN Glutaryl-CoA dehydrogenase, mitochondrial OS=Homo sapiens GN=GCDH
PE=1 SV=1
Length = 438
Score = 50.8 bits (120), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 5 LGVEIP--QEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKE 62
LGV P + YG G+S + L+ E+ RVD + +Q++LV I G+ EQ++
Sbjct: 103 LGVLGPTIKGYGCAGVSSVAYGLLARELERVDSGYRSAMSVQSSLVMHPIYAYGSEEQRQ 162
Query: 63 KYLPRLAQTDLMGV 76
KYLP+LA+ +L+G
Sbjct: 163 KYLPQLAKGELLGC 176
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 37/61 (60%)
Query: 82 YGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEKYLPRLAQTD 141
YG G+S + L+ E+ RVD + +Q++LV I G+ EQ++KYLP+LA+ +
Sbjct: 113 YGCAGVSSVAYGLLARELERVDSGYRSAMSVQSSLVMHPIYAYGSEEQRQKYLPQLAKGE 172
Query: 142 V 142
+
Sbjct: 173 L 173
>sp|Q07417|ACADS_MOUSE Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Mus
musculus GN=Acads PE=2 SV=2
Length = 412
Score = 50.4 bits (119), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 43/73 (58%)
Query: 4 LLGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEK 63
LL +++P+E G GL ++ + +EEI+R S +++ + N+L I+K G+ +QK++
Sbjct: 79 LLAMDVPEELSGAGLDYLAYSIALEEISRACASTGVIMSVNNSLYLGPILKFGSAQQKQQ 138
Query: 64 YLPRLAQTDLMGV 76
++ D +G
Sbjct: 139 WITPFTNGDKIGC 151
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 44/75 (58%)
Query: 67 RLAQTDLMGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGT 126
++ + L+ +++P+E G GL ++ + +EEI+R S +++ + N+L I+K G+
Sbjct: 73 KMGELGLLAMDVPEELSGAGLDYLAYSIALEEISRACASTGVIMSVNNSLYLGPILKFGS 132
Query: 127 TEQKEKYLPRLAQTD 141
+QK++++ D
Sbjct: 133 AQQKQQWITPFTNGD 147
>sp|P79273|ACADS_PIG Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Sus
scrofa GN=ACADS PE=2 SV=1
Length = 413
Score = 50.4 bits (119), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 45/80 (56%)
Query: 62 EKYLPRLAQTDLMGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLI 121
E + ++ + LM +++P+E G GL ++ + +EEI+R S +++ + N L I
Sbjct: 68 EAQVKKMGELGLMAMDVPEELSGAGLDYLAYTIAMEEISRGCASTGVIMSVNNFLYLGPI 127
Query: 122 IKLGTTEQKEKYLPRLAQTD 141
+K G+ EQK++++ D
Sbjct: 128 LKFGSKEQKQQWITPFTSGD 147
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 42/73 (57%)
Query: 4 LLGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEK 63
L+ +++P+E G GL ++ + +EEI+R S +++ + N L I+K G+ EQK++
Sbjct: 79 LMAMDVPEELSGAGLDYLAYTIAMEEISRGCASTGVIMSVNNFLYLGPILKFGSKEQKQQ 138
Query: 64 YLPRLAQTDLMGV 76
++ D +G
Sbjct: 139 WITPFTSGDKVGC 151
>sp|P48818|ACADV_BOVIN Very long-chain specific acyl-CoA dehydrogenase, mitochondrial
OS=Bos taurus GN=ACADVL PE=2 SV=3
Length = 655
Score = 50.4 bits (119), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 52/109 (47%), Gaps = 5/109 (4%)
Query: 33 VDPSVSILVDIQNTLVNDLIIKLGTTEQKEKYLPRLAQTDLMGVEIPQEYGGPGLSFMTD 92
V P ++ + ND++ ++ +E + L + G+++P E GG GL
Sbjct: 106 VGPVTRFFEEVNDAAKNDMLERV-----EETTMQGLKELGAFGLQVPNELGGVGLCNTQY 160
Query: 93 ILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEKYLPRLAQTD 141
+VE + D V I++ ++ I+ GT QKEKYLP+LA +
Sbjct: 161 ARLVEIVGMYDLGVGIVLGAHQSIGFKGILLFGTKAQKEKYLPKLASGE 209
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%)
Query: 5 LGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEKY 64
G+++P E GG GL +VE + D V I++ ++ I+ GT QKEKY
Sbjct: 142 FGLQVPNELGGVGLCNTQYARLVEIVGMYDLGVGIVLGAHQSIGFKGILLFGTKAQKEKY 201
Query: 65 LPRLAQTD 72
LP+LA +
Sbjct: 202 LPKLASGE 209
>sp|P15651|ACADS_RAT Short-chain specific acyl-CoA dehydrogenase, mitochondrial
OS=Rattus norvegicus GN=Acads PE=1 SV=2
Length = 412
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 44/73 (60%)
Query: 4 LLGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEK 63
LL +++P+E G GL ++ + +EEI+R S +++ + N+L I+K G+++QK++
Sbjct: 79 LLAMDVPEELSGAGLDYLAYSIALEEISRGCASTGVIMSVNNSLYLGPILKFGSSQQKQQ 138
Query: 64 YLPRLAQTDLMGV 76
++ D +G
Sbjct: 139 WITPFTNGDKIGC 151
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 48/86 (55%), Gaps = 5/86 (5%)
Query: 61 KEKYLP-----RLAQTDLMGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNT 115
KE P ++ + L+ +++P+E G GL ++ + +EEI+R S +++ + N+
Sbjct: 62 KEHLFPTSQVKKMGELGLLAMDVPEELSGAGLDYLAYSIALEEISRGCASTGVIMSVNNS 121
Query: 116 LVNDLIIKLGTTEQKEKYLPRLAQTD 141
L I+K G+++QK++++ D
Sbjct: 122 LYLGPILKFGSSQQKQQWITPFTNGD 147
>sp|Q8JZN5|ACAD9_MOUSE Acyl-CoA dehydrogenase family member 9, mitochondrial OS=Mus
musculus GN=Acad9 PE=2 SV=2
Length = 625
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 65 LPRLAQTDLMGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKL 124
L +L L G+++P+EYGG GLS T + EI +D S+++ + + II +
Sbjct: 102 LEKLKSLGLFGIQVPEEYGGLGLS-NTMYARLGEIISLDASITVTLAAHQAIGLKGIILV 160
Query: 125 GTTEQKEKYLPRLA 138
G EQK KYLP+L+
Sbjct: 161 GNEEQKAKYLPKLS 174
Score = 47.8 bits (112), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 4 LLGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEK 63
L G+++P+EYGG GLS T + EI +D S+++ + + II +G EQK K
Sbjct: 110 LFGIQVPEEYGGLGLS-NTMYARLGEIISLDASITVTLAAHQAIGLKGIILVGNEEQKAK 168
Query: 64 YLPRLA 69
YLP+L+
Sbjct: 169 YLPKLS 174
>sp|O32176|FADE_BACSU Probable acyl-CoA dehydrogenase OS=Bacillus subtilis (strain 168)
GN=fadE PE=2 SV=1
Length = 594
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 59 EQKEKYLPRLAQTDLMGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVN 118
E + L + + L+G ++P+EYGG GL ++ LI E+ +R S S+ + +
Sbjct: 62 EHSVRLLKKAGELGLLGADVPEEYGGLGLDKISSALITEKFSRAG-SFSLSYGAHVGIGS 120
Query: 119 DLIIKLGTTEQKEKYLPRLA 138
I+ G+ EQK+KYLP LA
Sbjct: 121 LPIVFFGSEEQKKKYLPGLA 140
Score = 48.1 bits (113), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 4 LLGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEK 63
LLG ++P+EYGG GL ++ LI E+ +R S S+ + + I+ G+ EQK+K
Sbjct: 76 LLGADVPEEYGGLGLDKISSALITEKFSRAG-SFSLSYGAHVGIGSLPIVFFGSEEQKKK 134
Query: 64 YLPRLA 69
YLP LA
Sbjct: 135 YLPGLA 140
>sp|Q9H845|ACAD9_HUMAN Acyl-CoA dehydrogenase family member 9, mitochondrial OS=Homo
sapiens GN=ACAD9 PE=1 SV=1
Length = 621
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 65 LPRLAQTDLMGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKL 124
L +L L G+++P+EYGG G S T + EI +D S+++ + + II
Sbjct: 98 LEKLKSLGLFGLQVPEEYGGLGFS-NTMYSRLGEIISMDGSITVTLAAHQAIGLKGIILA 156
Query: 125 GTTEQKEKYLPRLA 138
GT EQK KYLP+LA
Sbjct: 157 GTEEQKAKYLPKLA 170
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 4 LLGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEK 63
L G+++P+EYGG G S T + EI +D S+++ + + II GT EQK K
Sbjct: 106 LFGLQVPEEYGGLGFS-NTMYSRLGEIISMDGSITVTLAAHQAIGLKGIILAGTEEQKAK 164
Query: 64 YLPRLA 69
YLP+LA
Sbjct: 165 YLPKLA 170
>sp|Q7U0Y2|ACDC_MYCBO Acyl-CoA dehydrogenase fadE12 OS=Mycobacterium bovis (strain ATCC
BAA-935 / AF2122/97) GN=fadE12 PE=3 SV=1
Length = 388
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 55/118 (46%), Gaps = 1/118 (0%)
Query: 21 MTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEKYLPRLAQTDLMGVEIPQ 80
MTD +E R ++ + N + K E + + +GV +P+
Sbjct: 1 MTDTSFIESEERQALRKAVASWVANYGHEYYLDKARKHEHTSELWAEAGKLGFLGVNLPE 60
Query: 81 EYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEKYLPRLA 138
EYGG G L++EE+A ++ ++V + + +I K GT +QK+++LP +A
Sbjct: 61 EYGGGGAGMYELSLVMEEMAAAGSALLLMV-VSPAINGTIIAKFGTDDQKKRWLPGIA 117
Score = 48.1 bits (113), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 4 LLGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEK 63
LGV +P+EYGG G L++EE+A ++ ++V + + +I K GT +QK++
Sbjct: 53 FLGVNLPEEYGGGGAGMYELSLVMEEMAAAGSALLLMV-VSPAINGTIIAKFGTDDQKKR 111
Query: 64 YLPRLAQTDL 73
+LP +A L
Sbjct: 112 WLPGIADGSL 121
>sp|P71539|ACDC_MYCTU Acyl-CoA dehydrogenase fadE12 OS=Mycobacterium tuberculosis
GN=fadE12 PE=1 SV=2
Length = 388
Score = 48.1 bits (113), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 55/118 (46%), Gaps = 1/118 (0%)
Query: 21 MTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEKYLPRLAQTDLMGVEIPQ 80
MTD +E R ++ + N + K E + + +GV +P+
Sbjct: 1 MTDTSFIESEERQALRKAVASWVANYGHEYYLDKARKHEHTSELWAEAGKLGFLGVNLPE 60
Query: 81 EYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEKYLPRLA 138
EYGG G L++EE+A ++ ++V + + +I K GT +QK+++LP +A
Sbjct: 61 EYGGGGAGMYELSLVMEEMAAAGSALLLMV-VSPAINGTIIAKFGTDDQKKRWLPGIA 117
Score = 48.1 bits (113), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 4 LLGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEK 63
LGV +P+EYGG G L++EE+A ++ ++V + + +I K GT +QK++
Sbjct: 53 FLGVNLPEEYGGGGAGMYELSLVMEEMAAAGSALLLMV-VSPAINGTIIAKFGTDDQKKR 111
Query: 64 YLPRLAQTDL 73
+LP +A L
Sbjct: 112 WLPGIADGSL 121
>sp|P45953|ACADV_RAT Very long-chain specific acyl-CoA dehydrogenase, mitochondrial
OS=Rattus norvegicus GN=Acadvl PE=1 SV=1
Length = 655
Score = 48.1 bits (113), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 50/106 (47%), Gaps = 5/106 (4%)
Query: 33 VDPSVSILVDIQNTLVNDLIIKLGTTEQKEKYLPRLAQTDLMGVEIPQEYGGPGLSFMTD 92
V P ++ + ND + K+ +E L L + G+++P E GG GLS
Sbjct: 106 VGPVARFFEEVNDPAKNDSLEKV-----EEDTLQGLKELGAFGLQVPSELGGLGLSNTQY 160
Query: 93 ILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEKYLPRLA 138
+ E + D VS+ + ++ I+ GT QKEKYLPR+A
Sbjct: 161 ARLAEIVGMHDLGVSVTLGAHQSIGFKGILLYGTKAQKEKYLPRVA 206
Score = 44.3 bits (103), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%)
Query: 5 LGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEKY 64
G+++P E GG GLS + E + D VS+ + ++ I+ GT QKEKY
Sbjct: 142 FGLQVPSELGGLGLSNTQYARLAEIVGMHDLGVSVTLGAHQSIGFKGILLYGTKAQKEKY 201
Query: 65 LPRLA 69
LPR+A
Sbjct: 202 LPRVA 206
>sp|P45867|ACDA_BACSU Acyl-CoA dehydrogenase OS=Bacillus subtilis (strain 168) GN=acdA
PE=2 SV=1
Length = 379
Score = 47.8 bits (112), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 41/71 (57%)
Query: 68 LAQTDLMGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTT 127
+A L G+ P++YGG G ++ ++ VEE+++V S + + +L + + GT
Sbjct: 45 MANLGLTGIPWPEDYGGIGSDYLAYVIAVEELSKVCASTGVTLSAHISLCSWPLFAFGTE 104
Query: 128 EQKEKYLPRLA 138
EQK +YL +LA
Sbjct: 105 EQKTEYLTQLA 115
Score = 47.4 bits (111), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%)
Query: 4 LLGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEK 63
L G+ P++YGG G ++ ++ VEE+++V S + + +L + + GT EQK +
Sbjct: 50 LTGIPWPEDYGGIGSDYLAYVIAVEELSKVCASTGVTLSAHISLCSWPLFAFGTEEQKTE 109
Query: 64 YLPRLAQTDLMGV 76
YL +LA + +G
Sbjct: 110 YLTQLALGEKIGA 122
>sp|C3UVB0|ACD_DESML Glutaryl-CoA dehydrogenase OS=Desulfococcus multivorans GN=Acd PE=1
SV=1
Length = 389
Score = 47.0 bits (110), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 50/104 (48%), Gaps = 8/104 (7%)
Query: 46 TLVNDLIIKLGTTEQKEKYLPR------LAQTDLMGVEIPQEYGGPGL--SFMTDILIVE 97
VN I+ E + P + + G IP+EYGG G+ ++ +++ E
Sbjct: 18 NFVNKKIVPFADQWDNENHFPYEEAVRPMGELGFFGTVIPEEYGGEGMDQGWLAAMIVTE 77
Query: 98 EIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEKYLPRLAQTD 141
EIAR ++ + ++++ I+ G+ K+KY+P+L+ +
Sbjct: 78 EIARGSSALRVQLNMEVLGCAYTILTYGSEALKKKYVPKLSSAE 121
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
Query: 4 LLGVEIPQEYGGPGL--SFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQK 61
G IP+EYGG G+ ++ +++ EEIAR ++ + ++++ I+ G+ K
Sbjct: 51 FFGTVIPEEYGGEGMDQGWLAAMIVTEEIARGSSALRVQLNMEVLGCAYTILTYGSEALK 110
Query: 62 EKYLPRLAQTDLMG 75
+KY+P+L+ + +G
Sbjct: 111 KKYVPKLSSAEFLG 124
>sp|P81140|GCDH_PIG Glutaryl-CoA dehydrogenase, mitochondrial (Fragment) OS=Sus scrofa
GN=GCDH PE=1 SV=1
Length = 408
Score = 47.0 bits (110), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 5 LGVEIP--QEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTE-QK 61
LGV P + YG G+S + L+ E+ RVD + +Q++LV I G+ E Q+
Sbjct: 72 LGVLGPTIKGYGCAGVSSVAYGLLARELERVDSGYRSAMSVQSSLVMHPIYAYGSEEQQQ 131
Query: 62 EKYLPRLAQTDLMGV 76
+KYLPRLA+ +L+G
Sbjct: 132 QKYLPRLAKGELLGC 146
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 82 YGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTE-QKEKYLPRLAQT 140
YG G+S + L+ E+ RVD + +Q++LV I G+ E Q++KYLPRLA+
Sbjct: 82 YGCAGVSSVAYGLLARELERVDSGYRSAMSVQSSLVMHPIYAYGSEEQQQQKYLPRLAKG 141
Query: 141 DV 142
++
Sbjct: 142 EL 143
>sp|Q8HXY7|ACADV_MACFA Very long-chain specific acyl-CoA dehydrogenase, mitochondrial
OS=Macaca fascicularis GN=ACADVL PE=2 SV=1
Length = 655
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 5/109 (4%)
Query: 33 VDPSVSILVDIQNTLVNDLIIKLGTTEQKEKYLPRLAQTDLMGVEIPQEYGGPGLSFMTD 92
V+P ++ + ND + + +E L L + G+++P E GG GL
Sbjct: 106 VEPVSRFFEEVNDPAKNDTLEMV-----EETTLQGLKELGAFGLQVPSELGGVGLCNTQY 160
Query: 93 ILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEKYLPRLAQTD 141
+VE + D +V I + ++ I+ GT QKEKYLP+LA +
Sbjct: 161 ARLVEIVGMHDLAVGITLGAHQSIGFKGILLFGTKAQKEKYLPKLASGE 209
Score = 44.7 bits (104), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 37/72 (51%)
Query: 5 LGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEKY 64
G+++P E GG GL +VE + D +V I + ++ I+ GT QKEKY
Sbjct: 142 FGLQVPSELGGVGLCNTQYARLVEIVGMHDLAVGITLGAHQSIGFKGILLFGTKAQKEKY 201
Query: 65 LPRLAQTDLMGV 76
LP+LA + +
Sbjct: 202 LPKLASGETLAA 213
>sp|P50544|ACADV_MOUSE Very long-chain specific acyl-CoA dehydrogenase, mitochondrial
OS=Mus musculus GN=Acadvl PE=1 SV=3
Length = 656
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 5/106 (4%)
Query: 33 VDPSVSILVDIQNTLVNDLIIKLGTTEQKEKYLPRLAQTDLMGVEIPQEYGGPGLSFMTD 92
V P ++ + ND + K+ ++ L L + G+++P E GG GLS
Sbjct: 107 VGPVARFFEEVNDPAKNDALEKV-----EDDTLQGLKELGAFGLQVPSELGGLGLSNTQY 161
Query: 93 ILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEKYLPRLA 138
+ E + D VS+ + ++ I+ GT Q+EKYLPR+A
Sbjct: 162 ARLAEIVGMHDLGVSVTLGAHQSIGFKGILLYGTKAQREKYLPRVA 207
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%)
Query: 5 LGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEKY 64
G+++P E GG GLS + E + D VS+ + ++ I+ GT Q+EKY
Sbjct: 143 FGLQVPSELGGLGLSNTQYARLAEIVGMHDLGVSVTLGAHQSIGFKGILLYGTKAQREKY 202
Query: 65 LPRLA 69
LPR+A
Sbjct: 203 LPRVA 207
>sp|Q9FS87|IVD2_SOLTU Isovaleryl-CoA dehydrogenase 2, mitochondrial (Fragment) OS=Solanum
tuberosum GN=IVD2 PE=1 SV=1
Length = 401
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 45/74 (60%)
Query: 3 TLLGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKE 62
LLG+ +P+EYGG GL ++ + +EEI+R SV + L + +++ GT EQK+
Sbjct: 69 NLLGITVPEEYGGLGLGYLYHCIAMEEISRASGSVGLSYGAHTNLCINQLVRNGTHEQKQ 128
Query: 63 KYLPRLAQTDLMGV 76
KYLP+L + +G
Sbjct: 129 KYLPKLISGEHVGA 142
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 43/66 (65%)
Query: 72 DLMGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKE 131
+L+G+ +P+EYGG GL ++ + +EEI+R SV + L + +++ GT EQK+
Sbjct: 69 NLLGITVPEEYGGLGLGYLYHCIAMEEISRASGSVGLSYGAHTNLCINQLVRNGTHEQKQ 128
Query: 132 KYLPRL 137
KYLP+L
Sbjct: 129 KYLPKL 134
>sp|Q20772|GCDH_CAEEL Probable glutaryl-CoA dehydrogenase, mitochondrial
OS=Caenorhabditis elegans GN=F54D5.7 PE=1 SV=1
Length = 409
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 51/105 (48%), Gaps = 5/105 (4%)
Query: 38 SILVDIQNTLVNDLIIKLGTTEQKEKY----LPRLAQTDLMGVEIPQEYGGPGLSFMTDI 93
S+++ + L+ ++ + EK+ +P + L+G Q YG G S +
Sbjct: 38 SLMLSAREYCQERLLPRVTEAYRTEKFDPSLIPEMGSMGLLGAPY-QGYGCAGTSTVGYG 96
Query: 94 LIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEKYLPRLA 138
LI E+ RVD + +Q +LV I G+ +QK+KY+P LA
Sbjct: 97 LIAREVERVDSGYRSTMSVQTSLVIGPIYNYGSEDQKQKYIPDLA 141
Score = 44.7 bits (104), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 11 QEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEKYLPRLA- 69
Q YG G S + LI E+ RVD + +Q +LV I G+ +QK+KY+P LA
Sbjct: 83 QGYGCAGTSTVGYGLIAREVERVDSGYRSTMSVQTSLVIGPIYNYGSEDQKQKYIPDLAS 142
Query: 70 --QTDLMGVEIPQEYGGPG 86
+ G+ P PG
Sbjct: 143 GKKIGCFGLTEPNHGSNPG 161
>sp|Q8ZBY6|FADE_YERPE Acyl-coenzyme A dehydrogenase OS=Yersinia pestis GN=fadE PE=3 SV=1
Length = 815
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 55/118 (46%), Gaps = 5/118 (4%)
Query: 25 LIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEKYLPRLAQTDLMGVEIPQEYGG 84
L EE A +D V + + ND I + + L + + I +EYGG
Sbjct: 120 LTAEEQAFIDGPV----EEACRMANDFQITHELADLPPELWDYLKEKRFFAMIIKKEYGG 175
Query: 85 PGLSFMTDILIVEEIARVDPSVSILVDIQNTL-VNDLIIKLGTTEQKEKYLPRLAQTD 141
S +++++A V ++I V + N+L +L+ GT EQK YLPRLA+ D
Sbjct: 176 LEFSAYAQARVLQKLAGVSGILAITVGVPNSLGPGELLQHYGTEEQKNHYLPRLARGD 233
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 5/72 (6%)
Query: 9 IPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTL-VNDLIIKLGTTEQKEKYLPR 67
I +EYGG S +++++A V ++I V + N+L +L+ GT EQK YLPR
Sbjct: 169 IKKEYGGLEFSAYAQARVLQKLAGVSGILAITVGVPNSLGPGELLQHYGTEEQKNHYLPR 228
Query: 68 LAQTDLMGVEIP 79
LA+ D EIP
Sbjct: 229 LARGD----EIP 236
>sp|P49748|ACADV_HUMAN Very long-chain specific acyl-CoA dehydrogenase, mitochondrial
OS=Homo sapiens GN=ACADVL PE=1 SV=1
Length = 655
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 5/109 (4%)
Query: 33 VDPSVSILVDIQNTLVNDLIIKLGTTEQKEKYLPRLAQTDLMGVEIPQEYGGPGLSFMTD 92
V+P ++ + ND + + +E L + G+++P E GG GL
Sbjct: 106 VEPVSRFFEEVNDPAKNDALEMV-----EETTWQGLKELGAFGLQVPSELGGVGLCNTQY 160
Query: 93 ILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEKYLPRLAQTD 141
+VE + D V I + ++ I+ GT QKEKYLP+LA +
Sbjct: 161 ARLVEIVGMHDLGVGITLGAHQSIGFKGILLFGTKAQKEKYLPKLASGE 209
Score = 43.9 bits (102), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 35/68 (51%)
Query: 5 LGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEKY 64
G+++P E GG GL +VE + D V I + ++ I+ GT QKEKY
Sbjct: 142 FGLQVPSELGGVGLCNTQYARLVEIVGMHDLGVGITLGAHQSIGFKGILLFGTKAQKEKY 201
Query: 65 LPRLAQTD 72
LP+LA +
Sbjct: 202 LPKLASGE 209
>sp|Q9SWG0|IVD_ARATH Isovaleryl-CoA dehydrogenase, mitochondrial OS=Arabidopsis thaliana
GN=IVD PE=1 SV=2
Length = 409
Score = 44.3 bits (103), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 44/70 (62%)
Query: 68 LAQTDLMGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTT 127
+ + +L G+ P+EYGG GL ++ + +EEI+R SV++ + L + +++ GT
Sbjct: 73 MGEFNLHGITAPEEYGGLGLGYLYHCIAMEEISRASGSVALSYGAHSNLCINQLVRNGTA 132
Query: 128 EQKEKYLPRL 137
QKEKYLP+L
Sbjct: 133 AQKEKYLPKL 142
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%)
Query: 3 TLLGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKE 62
L G+ P+EYGG GL ++ + +EEI+R SV++ + L + +++ GT QKE
Sbjct: 77 NLHGITAPEEYGGLGLGYLYHCIAMEEISRASGSVALSYGAHSNLCINQLVRNGTAAQKE 136
Query: 63 KYLPRLAQTDLMGV 76
KYLP+L + +G
Sbjct: 137 KYLPKLISGEHVGA 150
>sp|P63430|Y897_MYCBO Probable acyl-CoA dehydrogenase FadE10 OS=Mycobacterium bovis
(strain ATCC BAA-935 / AF2122/97) GN=fadE10 PE=3 SV=1
Length = 650
Score = 43.5 bits (101), Expect = 0.001, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 62 EKYLPRLAQTDLMGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLI 121
++Y+ LA+ G++IP EYGG +S + ++ + V S+ L+ ++
Sbjct: 84 DEYVKGLAELGCFGLKIPSEYGGLNMSQVAYNRVLMMVTTVHSSLGALLSAHQSIGVPEP 143
Query: 122 IKL-GTTEQKEKYLPRLAQTDVS 143
+KL GT EQK ++LPR A +S
Sbjct: 144 LKLAGTAEQKRRFLPRCAAGAIS 166
Score = 37.7 bits (86), Expect = 0.056, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 5 LGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKL-GTTEQKEK 63
G++IP EYGG +S + ++ + V S+ L+ ++ +KL GT EQK +
Sbjct: 96 FGLKIPSEYGGLNMSQVAYNRVLMMVTTVHSSLGALLSAHQSIGVPEPLKLAGTAEQKRR 155
Query: 64 YLPRLA 69
+LPR A
Sbjct: 156 FLPRCA 161
>sp|P63429|Y873_MYCTU Probable acyl-CoA dehydrogenase FadE10 OS=Mycobacterium
tuberculosis GN=fadE10 PE=3 SV=1
Length = 650
Score = 43.5 bits (101), Expect = 0.001, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 62 EKYLPRLAQTDLMGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLI 121
++Y+ LA+ G++IP EYGG +S + ++ + V S+ L+ ++
Sbjct: 84 DEYVKGLAELGCFGLKIPSEYGGLNMSQVAYNRVLMMVTTVHSSLGALLSAHQSIGVPEP 143
Query: 122 IKL-GTTEQKEKYLPRLAQTDVS 143
+KL GT EQK ++LPR A +S
Sbjct: 144 LKLAGTAEQKRRFLPRCAAGAIS 166
Score = 37.7 bits (86), Expect = 0.056, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 5 LGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKL-GTTEQKEK 63
G++IP EYGG +S + ++ + V S+ L+ ++ +KL GT EQK +
Sbjct: 96 FGLKIPSEYGGLNMSQVAYNRVLMMVTTVHSSLGALLSAHQSIGVPEPLKLAGTAEQKRR 155
Query: 64 YLPRLA 69
+LPR A
Sbjct: 156 FLPRCA 161
>sp|O34421|ACDC_BACSU Probable acyl-CoA dehydrogenase YngJ OS=Bacillus subtilis (strain
168) GN=yngJ PE=3 SV=1
Length = 380
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 37/74 (50%)
Query: 65 LPRLAQTDLMGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKL 124
++ + LMG+ P+EYGG G ++ L VEE+ + S + +L +
Sbjct: 42 FKKMGELGLMGIPFPEEYGGSGGDTISYALAVEEVGKACGSTGLSYAAAVSLGASPLYYF 101
Query: 125 GTTEQKEKYLPRLA 138
GT EQK+ +L LA
Sbjct: 102 GTEEQKQTHLTPLA 115
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 36/72 (50%)
Query: 4 LLGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEK 63
L+G+ P+EYGG G ++ L VEE+ + S + +L + GT EQK+
Sbjct: 50 LMGIPFPEEYGGSGGDTISYALAVEEVGKACGSTGLSYAAAVSLGASPLYYFGTEEQKQT 109
Query: 64 YLPRLAQTDLMG 75
+L LA +G
Sbjct: 110 HLTPLASGTALG 121
>sp|Q47146|FADE_ECOLI Acyl-coenzyme A dehydrogenase OS=Escherichia coli (strain K12)
GN=fadE PE=2 SV=2
Length = 814
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 5/72 (6%)
Query: 9 IPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTL-VNDLIIKLGTTEQKEKYLPR 67
I +EYGG S ++++++ V ++I V + N+L +L+ GT EQK+ YLPR
Sbjct: 169 IKKEYGGLEFSAYAQSRVLQKLSGVSGILAITVGVPNSLGPGELLQHYGTDEQKDHYLPR 228
Query: 68 LAQTDLMGVEIP 79
LA+ G EIP
Sbjct: 229 LAR----GQEIP 236
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Query: 47 LVNDLIIKLGTTEQKEKYLPRLAQTDLMGVEIPQEYGGPGLSFMTDILIVEEIARVDPSV 106
+ ND I + + L + + I +EYGG S ++++++ V +
Sbjct: 138 MANDFQITHELADLPPELWAYLKEHRFFAMIIKKEYGGLEFSAYAQSRVLQKLSGVSGIL 197
Query: 107 SILVDIQNTL-VNDLIIKLGTTEQKEKYLPRLAQ 139
+I V + N+L +L+ GT EQK+ YLPRLA+
Sbjct: 198 AITVGVPNSLGPGELLQHYGTDEQKDHYLPRLAR 231
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.138 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 79,838,351
Number of Sequences: 539616
Number of extensions: 3240430
Number of successful extensions: 7783
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 66
Number of HSP's that attempted gapping in prelim test: 7552
Number of HSP's gapped (non-prelim): 240
length of query: 216
length of database: 191,569,459
effective HSP length: 113
effective length of query: 103
effective length of database: 130,592,851
effective search space: 13451063653
effective search space used: 13451063653
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)