Query psy5139
Match_columns 216
No_of_seqs 234 out of 2283
Neff 10.3
Searched_HMMs 29240
Date Fri Aug 16 18:19:47 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5139.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/5139hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1r2j_A Protein FKBI; polyketid 99.9 4.3E-26 1.5E-30 182.9 -9.0 197 2-215 36-279 (366)
2 2jif_A Short/branched chain sp 99.9 8.6E-26 2.9E-30 183.3 -8.4 198 2-215 72-319 (404)
3 2dvl_A Acyl-COA dehydrogenase; 99.9 1E-25 3.4E-30 181.2 -9.5 198 2-215 46-289 (372)
4 3p4t_A Putative acyl-COA dehyd 99.9 1.1E-25 3.6E-30 182.8 -9.9 198 2-215 69-317 (403)
5 3pfd_A Acyl-COA dehydrogenase; 99.9 1.4E-25 4.8E-30 181.5 -9.4 197 2-215 62-309 (393)
6 2d29_A Acyl-COA dehydrogenase; 99.9 2.2E-25 7.7E-30 180.0 -8.3 198 2-215 50-302 (387)
7 1rx0_A Acyl-COA dehydrogenase 99.9 3.6E-25 1.2E-29 179.1 -8.1 197 2-215 62-308 (393)
8 3r7k_A Probable acyl COA dehyd 99.9 1.9E-25 6.6E-30 181.2 -9.8 198 2-215 72-320 (403)
9 1ivh_A Isovaleryl-COA dehydrog 99.9 3.7E-25 1.3E-29 179.1 -8.8 198 2-215 58-308 (394)
10 3nf4_A Acyl-COA dehydrogenase; 99.9 3.5E-25 1.2E-29 178.9 -9.0 197 2-215 59-304 (387)
11 3owa_A Acyl-COA dehydrogenase; 99.9 4.4E-25 1.5E-29 186.3 -8.9 197 2-215 77-322 (597)
12 1ukw_A Acyl-COA dehydrogenase; 99.9 2.6E-25 8.8E-30 179.2 -10.4 197 2-215 48-295 (379)
13 2pg0_A Acyl-COA dehydrogenase; 99.9 7E-25 2.4E-29 177.0 -8.2 196 2-215 53-302 (385)
14 1egd_A Medium chain acyl-COA d 99.9 6.1E-25 2.1E-29 178.0 -9.1 197 2-215 59-309 (396)
15 3sf6_A Glutaryl-COA dehydrogen 99.9 1.1E-24 3.7E-29 176.9 -8.1 196 2-215 74-315 (403)
16 2vig_A Short-chain specific ac 99.9 3.6E-25 1.2E-29 179.0 -10.9 198 2-215 49-297 (391)
17 2eba_A Putative glutaryl-COA d 99.9 1.1E-24 3.7E-29 175.9 -8.8 197 2-215 54-298 (385)
18 3swo_A Glutaryl-COA dehydrogen 99.9 1.8E-24 6.2E-29 175.4 -8.2 196 2-215 69-310 (399)
19 2z1q_A Acyl-COA dehydrogenase; 99.8 2E-24 6.9E-29 182.1 -8.8 197 2-215 72-317 (577)
20 1buc_A Butyryl-COA dehydrogena 99.8 1.2E-24 4E-29 175.6 -10.0 198 2-215 48-300 (383)
21 2ix5_A Acyl-coenzyme A oxidase 99.8 3.4E-24 1.2E-28 175.3 -7.7 196 2-215 98-341 (436)
22 2uxw_A VERY-long-chain specifi 99.8 1.9E-24 6.5E-29 182.9 -10.2 198 2-215 91-346 (607)
23 3ii9_A Glutaryl-COA dehydrogen 99.8 8.8E-25 3E-29 177.0 -12.5 197 2-215 62-308 (396)
24 4hr3_A Putative acyl-COA dehyd 99.8 2.4E-24 8.4E-29 175.4 -10.6 198 2-215 70-325 (415)
25 3mpi_A Glutaryl-COA dehydrogen 99.8 4.1E-24 1.4E-28 173.2 -10.6 197 2-215 49-299 (397)
26 1siq_A GCD, glutaryl-COA dehyd 99.8 2.3E-22 7.8E-27 162.7 -9.2 196 2-215 57-301 (392)
27 3mkh_A Nitroalkane oxidase; ox 99.8 1.5E-22 5E-27 166.0 -10.6 196 2-215 57-328 (438)
28 2c12_A Nitroalkane oxidase; ox 99.8 3.7E-22 1.3E-26 163.7 -8.9 197 2-215 55-331 (439)
29 3mxl_A Nitrososynthase; flavin 99.7 9.3E-21 3.2E-25 153.4 -9.6 198 2-215 51-297 (395)
30 2wbi_A Acyl-COA dehydrogenase 99.7 3.2E-21 1.1E-25 157.6 -13.6 195 2-215 79-333 (428)
31 3m9v_A FAD-dependent oxidoredu 99.7 3.6E-20 1.2E-24 151.9 -10.7 198 2-215 62-308 (439)
32 2jbr_A P-hydroxyphenylacetate 99.6 1.3E-19 4.4E-24 147.9 -14.3 194 2-215 75-322 (422)
33 2rfq_A 3-HSA hydroxylase, oxyg 99.6 8.1E-19 2.8E-23 142.0 -13.1 194 2-215 47-294 (394)
34 2or0_A Hydroxylase; APC7385, r 99.6 4.1E-19 1.4E-23 144.6 -15.1 194 2-215 60-309 (414)
35 3djl_A Protein AIDB; alpha hel 99.5 9.7E-18 3.3E-22 140.1 -10.9 192 2-215 98-352 (541)
36 2jif_A Short/branched chain sp 99.4 1.7E-13 5.7E-18 111.1 4.8 121 60-180 61-187 (404)
37 2d29_A Acyl-COA dehydrogenase; 99.4 1.8E-13 6.2E-18 110.3 4.9 122 59-180 38-166 (387)
38 3p4t_A Putative acyl-COA dehyd 99.4 2.2E-13 7.5E-18 110.4 5.4 122 59-180 57-186 (403)
39 2dvl_A Acyl-COA dehydrogenase; 99.4 2.2E-13 7.5E-18 109.3 4.6 122 59-180 34-162 (372)
40 1ukw_A Acyl-COA dehydrogenase; 99.4 2.5E-13 8.4E-18 109.3 4.5 121 59-180 36-163 (379)
41 3ii9_A Glutaryl-COA dehydrogen 99.4 1.3E-13 4.6E-18 111.4 2.9 122 59-180 50-178 (396)
42 2vig_A Short-chain specific ac 99.4 2.8E-13 9.6E-18 109.4 4.7 122 59-180 37-165 (391)
43 3pfd_A Acyl-COA dehydrogenase; 99.4 2.5E-13 8.4E-18 109.8 3.9 122 58-180 49-177 (393)
44 2eba_A Putative glutaryl-COA d 99.4 1.8E-13 6.3E-18 110.2 3.2 122 59-180 42-171 (385)
45 1r2j_A Protein FKBI; polyketid 99.4 3.3E-13 1.1E-17 108.1 4.5 121 59-180 24-150 (366)
46 3r7k_A Probable acyl COA dehyd 99.4 3E-13 1E-17 109.6 4.3 122 59-180 60-189 (403)
47 3nf4_A Acyl-COA dehydrogenase; 99.4 2.5E-13 8.7E-18 109.5 3.8 121 59-180 47-174 (387)
48 2pg0_A Acyl-COA dehydrogenase; 99.4 5.4E-13 1.8E-17 107.5 5.6 120 59-180 41-168 (385)
49 4hr3_A Putative acyl-COA dehyd 99.4 1.4E-12 5E-17 106.0 8.1 120 59-178 58-186 (415)
50 1rx0_A Acyl-COA dehydrogenase 99.3 4.7E-13 1.6E-17 108.1 4.7 121 59-180 50-177 (393)
51 1egd_A Medium chain acyl-COA d 99.3 4.1E-13 1.4E-17 108.6 3.7 121 59-180 47-174 (396)
52 3sf6_A Glutaryl-COA dehydrogen 99.3 7.4E-13 2.5E-17 107.3 4.9 120 60-180 62-189 (403)
53 1ivh_A Isovaleryl-COA dehydrog 99.3 4.9E-13 1.7E-17 108.0 3.5 118 63-180 50-174 (394)
54 2ix5_A Acyl-coenzyme A oxidase 99.3 7.4E-13 2.5E-17 108.3 4.2 121 59-180 86-213 (436)
55 1buc_A Butyryl-COA dehydrogena 99.3 8.1E-13 2.8E-17 106.4 3.9 122 59-180 36-168 (383)
56 3swo_A Glutaryl-COA dehydrogen 99.3 1E-12 3.5E-17 106.3 4.1 121 59-180 57-184 (399)
57 2z1q_A Acyl-COA dehydrogenase; 99.3 5.2E-12 1.8E-16 106.7 7.8 122 58-180 59-189 (577)
58 3mpi_A Glutaryl-COA dehydrogen 99.3 6.3E-13 2.2E-17 107.5 1.7 120 60-180 37-167 (397)
59 3owa_A Acyl-COA dehydrogenase; 99.3 7.4E-12 2.5E-16 105.9 7.3 121 59-180 65-194 (597)
60 2uxw_A VERY-long-chain specifi 99.2 6.9E-12 2.4E-16 106.3 4.5 121 60-180 80-209 (607)
61 2c12_A Nitroalkane oxidase; ox 99.2 2.6E-11 9E-16 99.2 7.0 115 62-177 46-174 (439)
62 3mkh_A Nitroalkane oxidase; ox 99.2 2.1E-11 7.2E-16 99.8 4.6 117 59-177 43-175 (438)
63 1siq_A GCD, glutaryl-COA dehyd 99.2 1E-11 3.5E-16 100.3 2.7 121 59-180 45-174 (392)
64 3mxl_A Nitrososynthase; flavin 99.1 1.4E-11 4.8E-16 99.5 2.8 118 59-180 39-168 (395)
65 3m9v_A FAD-dependent oxidoredu 99.0 4.8E-11 1.6E-15 97.7 2.1 119 58-180 49-179 (439)
66 2wbi_A Acyl-COA dehydrogenase 99.0 1.1E-10 3.9E-15 95.2 4.0 117 59-178 67-192 (428)
67 1w07_A Acyl-COA oxidase; oxido 99.0 2.5E-13 8.4E-18 116.2 -13.1 73 8-88 74-147 (659)
68 2jbr_A P-hydroxyphenylacetate 99.0 1.6E-10 5.5E-15 94.1 3.2 114 59-180 63-177 (422)
69 2or0_A Hydroxylase; APC7385, r 99.0 1.8E-10 6.1E-15 93.6 2.7 114 59-180 48-162 (414)
70 2rfq_A 3-HSA hydroxylase, oxyg 99.0 1.8E-10 6.2E-15 93.0 2.3 114 59-180 35-149 (394)
71 2ddh_A Acyl-COA oxidase; beta 98.7 3.1E-11 1E-15 103.3 -11.3 73 11-88 75-148 (661)
72 1u8v_A Gamma-aminobutyrate met 98.3 3.1E-09 1.1E-13 87.9 -9.4 147 51-216 119-342 (490)
73 3djl_A Protein AIDB; alpha hel 98.0 1.9E-06 6.5E-11 72.1 2.7 112 61-180 88-223 (541)
74 2yyk_A 4-hydroxyphenylacetate- 97.7 1.7E-08 5.8E-13 83.3 -15.4 145 57-216 122-334 (481)
75 3hwc_A Chlorophenol-4-monooxyg 97.6 4.8E-08 1.7E-12 80.9 -13.1 150 55-216 127-338 (515)
76 1w07_A Acyl-COA oxidase; oxido 97.5 4.2E-05 1.4E-09 65.6 3.1 113 59-180 57-184 (659)
77 1u8v_A Gamma-aminobutyrate met 96.5 0.00075 2.6E-08 55.8 1.6 60 120-180 119-196 (490)
78 2ddh_A Acyl-COA oxidase; beta 95.8 0.0069 2.4E-07 52.0 3.9 64 116-179 106-184 (661)
79 2yyk_A 4-hydroxyphenylacetate- 95.4 0.0071 2.4E-07 49.9 2.4 54 126-180 122-190 (481)
80 3hwc_A Chlorophenol-4-monooxyg 94.8 0.014 4.8E-07 48.4 2.7 52 128-180 133-198 (515)
81 4g5e_A 2,4,6-trichlorophenol 4 66.2 2.4 8.2E-05 35.2 1.7 20 161-180 180-199 (517)
82 4g5e_A 2,4,6-trichlorophenol 4 60.6 0.059 2E-06 44.8 -8.8 19 197-215 317-338 (517)
No 1
>1r2j_A Protein FKBI; polyketide synthase, polyketide, acyl-COA dehydrogenase, , aldehyde dehydrogenase, oxidoreductase; HET: FAD; 2.10A {Streptomyces hygroscopicus} SCOP: a.29.3.1 e.6.1.1
Probab=99.88 E-value=4.3e-26 Score=182.92 Aligned_cols=197 Identities=21% Similarity=0.281 Sum_probs=149.9
Q ss_pred CccccccCCCCCCCCCCCHHHHHHHHHHHHccCCChhHHHHHHHhhHHHHHHhcCChhHHHHHHHHHHhCCceeeecCCC
Q psy5139 2 TTLLGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEKYLPRLAQTDLMGVEIPQE 81 (216)
Q Consensus 2 ~G~~~~~~p~~~GG~g~~~~~~~~~~ee~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~l~~g~~~~~~~~e~ 81 (216)
.||+++.+|++|||.|+++.+...+.||+++.+.++++.+..|..++...|. +++++|+++|+|++.+|++.+++++||
T Consensus 36 ~Gl~~~~~P~~~GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~l~-~g~~~q~~~~l~~~~~G~~~~~a~tEp 114 (366)
T 1r2j_A 36 DGLLCAEVAAEHGGLGLGSRENGEFTAHVGSLCSSLRSVMTSQGMAAWTVQR-LGDAGQRATFLKELTSGKLAAVGFSER 114 (366)
T ss_dssp TTTTSTTSCGGGTCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH-HSCHHHHHHHHHHTTCC-CEEEECCBT
T ss_pred CCCCCCCCChhhCCCCCCHHHHHHHHHHHHHHChHHHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHhCCCeeEEEeCCC
Confidence 5999999999999999999999999999999999887766555445666778 999999999999999999557899999
Q ss_pred CCCCCccHH-------------------------HHHHHHHHHHhhCC-Cce-eEeeechh-h-hHHHHHhcCCH--HHh
Q psy5139 82 YGGPGLSFM-------------------------TDILIVEEIARVDP-SVS-ILVDIQNT-L-VNDLIIKLGTT--EQK 130 (216)
Q Consensus 82 ~gG~~~~~~-------------------------~~~~v~e~lar~~~-~~~-~~v~~~~~-~-~~~~~~~~g~~--~~~ 130 (216)
.+|+|...+ .+.+++ +++++. +++ |+|+.+.+ + ......++|.+ ...
T Consensus 115 ~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v--~a~~~~~g~~~flV~~~~~Gv~~~~~~~~~G~r~~~~~ 192 (366)
T 1r2j_A 115 QAGSDLSAMRTRVRLDGDTAVVDGHKVWTTAAAYADHLVV--FGLQEDGSGAVVVVPADTPGVRVERVPKPSGCRAAGHA 192 (366)
T ss_dssp TBSSCGGGCCCEEEEETTEEEEEEEEEEETTTTTCSEEEE--EEBCSSSCCEEEEEETTSTTEEEEECSSCSSSTTSCCE
T ss_pred CCCCchhhCEeEEEEeCCEEEEEEEEecccCCcccCEEEE--EEEeCCCceEEEEEECCCCCeEecCCcCCccCCCCCee
Confidence 999885321 133344 666653 443 77876542 2 22222445633 456
Q ss_pred hhhchhc---ccccccccccchhhh-hhhhccccCCceeeccceeeeecCcccCCCcceeeeeec---------ccccee
Q psy5139 131 EKYLPRL---AQTDVSRTSRGYKAL-EWHAFYGRTDSLPLNDHLSHISSGCVGFDGQLKRWMVSC---------GLSLQI 197 (216)
Q Consensus 131 ~~~l~~~---~~~~lg~~~~g~~~~-~~~~~~~~~~~~~l~g~k~~va~~~~g~~~~~~~~~~~~---------~fg~~i 197 (216)
+.+|+++ .++.++.++.|+... ...+...| ..+++..+|. ++.+++. +||+||
T Consensus 193 ~v~f~~v~Vp~~~~lg~~~~g~~~~~~~~l~~~r----------~~~aa~~~G~----a~~al~~a~~ya~~R~~fg~~i 258 (366)
T 1r2j_A 193 DLHLDQVRVPAGAVLAGSGASLPMLVAASLAYGR----------KSVAWGCVGI----LRACRTAAVAHARTREQFGRPL 258 (366)
T ss_dssp EEEEEEEEEEGGGBCTTTTSCTTTTTHHHHHHHH----------HHHHHHHHHH----HHHHHHHHHHHHTTCEETTEEG
T ss_pred EEEEeeEEEcHHHcCCCCCccHHHHHHHHhhHHH----------HHHHHHHHHH----HHHHHHHHHHHHhcCccCCCch
Confidence 6788875 467888888888877 66666666 8888888888 6666543 499999
Q ss_pred eeeeccc---ccccccccccC
Q psy5139 198 LQFQNLS---SDMHMTGLASR 215 (216)
Q Consensus 198 ~~~Q~v~---ad~~~~~~~~r 215 (216)
++||.|| +||.++++++|
T Consensus 259 ~~~q~v~~~la~~~~~~~~ar 279 (366)
T 1r2j_A 259 GDHQLVAGHIADLWTAEQIAA 279 (366)
T ss_dssp GGSHHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHH
Confidence 9999999 99999999876
No 2
>2jif_A Short/branched chain specific acyl-COA dehydrogen; mitochondrion, oxidoreductase, transit peptide, fatty acid metabolism, FAD, flavoprotein; HET: FAD COS; 2.0A {Homo sapiens}
Probab=99.88 E-value=8.6e-26 Score=183.31 Aligned_cols=198 Identities=31% Similarity=0.496 Sum_probs=151.0
Q ss_pred CccccccCCCCCCCCCCCHHHHHHHHHHHHccCCChhHHHHHHHhhHHHHHHhcCChhHHHHHHHHHHhCCceeeecCCC
Q psy5139 2 TTLLGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEKYLPRLAQTDLMGVEIPQE 81 (216)
Q Consensus 2 ~G~~~~~~p~~~GG~g~~~~~~~~~~ee~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~l~~g~~~~~~~~e~ 81 (216)
.||+++.+|++|||.|+++.+.+.+.||+++.+.++++.+..+..++...|..+++++|+++|+|.+.++.+.+++++||
T Consensus 72 ~Gl~~l~~P~e~GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~l~~~g~~~qk~~~l~~~~~g~~~~~a~tEp 151 (404)
T 2jif_A 72 QGLMGIEVDPEYGGTGASFLSTVLVIEELAKVDASVAVFCEIQNTLINTLIRKHGTEEQKATYLPQLTTEKVGSFCLSEA 151 (404)
T ss_dssp TTTTSSSSCGGGTCCCCCHHHHHHHHHHHHTTCHHHHHHHHHHHHTHHHHHHHHCCHHHHHHHHHHHHHTCCEEEECCBT
T ss_pred CCCCccCCchhhCCCCCCHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhCCCcceEEecCC
Confidence 59999999999999999999999999999999988877666555566778889999999999999999987668899999
Q ss_pred CCCCCccHH-------------------------HHHHHHHHHHhhCC-----Cc-eeEeeechh-h-hHHHHHhcCCH-
Q psy5139 82 YGGPGLSFM-------------------------TDILIVEEIARVDP-----SV-SILVDIQNT-L-VNDLIIKLGTT- 127 (216)
Q Consensus 82 ~gG~~~~~~-------------------------~~~~v~e~lar~~~-----~~-~~~v~~~~~-~-~~~~~~~~g~~- 127 (216)
.+|+|...+ .+.+++ +++++. ++ .|+|+.+.+ + +.....++|.+
T Consensus 152 ~~Gsd~~~~~t~A~~~g~g~vlnG~K~~is~a~~Ad~~~v--~ar~~~~~~~~g~~~flV~~~~pGv~v~~~~~~~G~~~ 229 (404)
T 2jif_A 152 GAGSDSFALKTRADKEGDYYVLNGSKMWISSAEHAGLFLV--MANVDPTIGYKGITSFLVDRDTPGLHIGKPENKLGLRA 229 (404)
T ss_dssp TBSSSGGGCCCEEEEETTEEEEEEEEEEEETTTTCSEEEE--EEESCGGGGGGGEEEEEEETTCTTEEECCCCCBSSCTT
T ss_pred CCCCChhhceeEEEEeCCEEEEEeEEEeecCCcccCEEEE--EEEeCCCCCCCceEEEEEecCCCCeEeccCcccccCCC
Confidence 999885321 123333 555432 23 367776532 2 11222345543
Q ss_pred -HHhhhhchhc---ccccccccccchhhhhhhhccccCCceeeccceeeeecCcccCCCcceeeeeec---------ccc
Q psy5139 128 -EQKEKYLPRL---AQTDVSRTSRGYKALEWHAFYGRTDSLPLNDHLSHISSGCVGFDGQLKRWMVSC---------GLS 194 (216)
Q Consensus 128 -~~~~~~l~~~---~~~~lg~~~~g~~~~~~~~~~~~~~~~~l~g~k~~va~~~~g~~~~~~~~~~~~---------~fg 194 (216)
...+.+|+++ .++++|.++.|++.....+...| ..+++..+|. ++.+++. +||
T Consensus 230 ~~~~~v~fd~v~Vp~~~~lg~~g~g~~~~~~~l~~~r----------~~~aa~~~G~----a~~al~~a~~ya~~R~~fG 295 (404)
T 2jif_A 230 SSTCPLTFENVKVPEANILGQIGHGYKYAIGSLNEGR----------IGIAAQMLGL----AQGCFDYTIPYIKERIQFG 295 (404)
T ss_dssp SCEEEEEEEEEEEEGGGEESSTTCHHHHHHHHHHHHH----------HHHHHHHHHH----HHHHHHHHHHHHHHCEETT
T ss_pred CceEEEEEccEEECHHHcCCCCCchHHHHHHHHHHHH----------HHHHHHHHHH----HHHHHHHHHHHHHhCcccC
Confidence 3456778875 46788988889887777777677 8888888888 6666543 499
Q ss_pred ceeeeeeccc---ccccccccccC
Q psy5139 195 LQILQFQNLS---SDMHMTGLASR 215 (216)
Q Consensus 195 ~~i~~~Q~v~---ad~~~~~~~~r 215 (216)
+||++||.|| +||.++++++|
T Consensus 296 ~~i~~~q~vq~~la~~~~~~~aar 319 (404)
T 2jif_A 296 KRLFDFQGLQHQVAHVATQLEAAR 319 (404)
T ss_dssp EEGGGSHHHHHHHHHHHHHHHHHH
T ss_pred CcccccHHHHHHHHHHHHHHHHHH
Confidence 9999999999 99999999876
No 3
>2dvl_A Acyl-COA dehydrogenase; structural genomics, NPPSFA, national project on protein STR and functional analyses; HET: FAD; 2.50A {Thermus thermophilus}
Probab=99.87 E-value=1e-25 Score=181.19 Aligned_cols=198 Identities=26% Similarity=0.421 Sum_probs=150.9
Q ss_pred CccccccCCCCCCCCCCCHHHHHHHHHHHHccCCChhHHHHHHHhhHHHHHHhcCChhHHHHHHHHHHhCCce-eeecCC
Q psy5139 2 TTLLGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEKYLPRLAQTDLM-GVEIPQ 80 (216)
Q Consensus 2 ~G~~~~~~p~~~GG~g~~~~~~~~~~ee~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~l~~g~~~-~~~~~e 80 (216)
.||+++.+|++|||.|+++.+...+.||+++.+.+.+..+..|..++...|..+++++|+++|++++.+|+.+ +++++|
T Consensus 46 ~Gl~~~~~P~~~GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tE 125 (372)
T 2dvl_A 46 LGLLGMTTPEEWGGVGLDSVTWALALEELAAADPSVAVIVSVTSGLPQYMLLRFGSEAQKRRYLVPLARGEWIGAFCLTE 125 (372)
T ss_dssp TTGGGTTSCGGGTSCCCCHHHHHHHHHHHHHHCHHHHHHHHHHTSHHHHHHHHHCCHHHHHHTHHHHHTTSSCEEEECCC
T ss_pred CCCCCCCCChhhCCCCCCHHHHHHHHHHHHhcCcHHHHHHHHhhhHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEecC
Confidence 5999999999999999999999999999999998877666555335667789999999999999999999875 789999
Q ss_pred CCCCCCccHH-------------------------HHHHHHHHHHhhCCCce-eEeeechh-h-hHHHHHhcCCH--HHh
Q psy5139 81 EYGGPGLSFM-------------------------TDILIVEEIARVDPSVS-ILVDIQNT-L-VNDLIIKLGTT--EQK 130 (216)
Q Consensus 81 ~~gG~~~~~~-------------------------~~~~v~e~lar~~~~~~-~~v~~~~~-~-~~~~~~~~g~~--~~~ 130 (216)
|.+|+|...+ .+.+++ +++++.+++ |+|+.+.+ + ......++|.+ ...
T Consensus 126 p~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v--~a~~~~g~~~flV~~~~pGv~v~~~~~~~G~~~~~~~ 203 (372)
T 2dvl_A 126 PQAGSDAKSLRAEARRVKGGFVLNGVKSWITSAGHAHLYVV--MARTEKGISAFLVEKGTPGLSFGRPEEKMGLHAAHTA 203 (372)
T ss_dssp SSCSSCGGGCCCEEEEETTEEEEEEEEEEEETTTTCSEEEE--EEEETTEEEEEEEETTCTTEEECCCCCCSSCTTSCEE
T ss_pred CCCCCChhhCeeEEEEECCEEEEEeEEEeecCCCcCCEEEE--EEEeCCCcEEEEEeCCCCCeEecCcccccccCcCCee
Confidence 9999886421 123333 555553333 67776542 2 11222345533 455
Q ss_pred hhhchhc---ccccccccccchhhhhhhhccccCCceeeccceeeeecCcccCCCcceeeeeec---------cccceee
Q psy5139 131 EKYLPRL---AQTDVSRTSRGYKALEWHAFYGRTDSLPLNDHLSHISSGCVGFDGQLKRWMVSC---------GLSLQIL 198 (216)
Q Consensus 131 ~~~l~~~---~~~~lg~~~~g~~~~~~~~~~~~~~~~~l~g~k~~va~~~~g~~~~~~~~~~~~---------~fg~~i~ 198 (216)
+..|+++ .++.++.++.|+......+...| ..+++..+|. ++.+++. +||+||+
T Consensus 204 ~v~fd~v~Vp~~~~lg~~~~g~~~~~~~l~~~r----------~~~aa~~~G~----a~~al~~a~~ya~~R~~fg~~i~ 269 (372)
T 2dvl_A 204 EVRLEEVFVPEENLLGEEGRGLAYALAGLDSGR----------VGVAAQAVGI----ARGAFEIAKAYAEEREQFGKKLK 269 (372)
T ss_dssp EEEEEEEEEEGGGEESSTTCHHHHHHHHHHHHH----------HHHHHHHHHH----HHHHHHHHHHHHHHCEETTEEGG
T ss_pred EEEECcEEeCHHHcCCCCCchHHHHHHHHHHHH----------HHHHHHHHHH----HHHHHHHHHHHHhhCcccCCchh
Confidence 6778875 46788988889887777777777 8888888888 6665543 4999999
Q ss_pred eeeccc---ccccccccccC
Q psy5139 199 QFQNLS---SDMHMTGLASR 215 (216)
Q Consensus 199 ~~Q~v~---ad~~~~~~~~r 215 (216)
+||.|| +||+++++++|
T Consensus 270 ~~q~vq~~la~~~~~~~aar 289 (372)
T 2dvl_A 270 EHQAIAFKIADMHVKIAAAR 289 (372)
T ss_dssp GSHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHH
Confidence 999999 99999999876
No 4
>3p4t_A Putative acyl-COA dehydrogenase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: FAO; 1.70A {Mycobacterium smegmatis} PDB: 3oib_A*
Probab=99.87 E-value=1.1e-25 Score=182.78 Aligned_cols=198 Identities=17% Similarity=0.219 Sum_probs=152.9
Q ss_pred CccccccCCCCCCCCCCCHHHHHHHHHHHHccCCCh-hHHHHHHHhhHHHHHHhcCChhHHHHHHHHHHhCCce-eeecC
Q psy5139 2 TTLLGVEIPQEYGGPGLSFMTDILIVEEIARVDPSV-SILVDIQNTLVNDLIIKLGTTEQKEKYLPRLAQTDLM-GVEIP 79 (216)
Q Consensus 2 ~G~~~~~~p~~~GG~g~~~~~~~~~~ee~~~~~~~~-~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~l~~g~~~-~~~~~ 79 (216)
.||+++.+|++|||.|+++.+.+.+.||+++.+.+. +..+..+..++...+..+++++|+++|++++.+|+.+ +++++
T Consensus 69 ~Gl~~l~~P~e~GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~t 148 (403)
T 3p4t_A 69 LGLLGAGFPEDAGGSGGDGADPVVICEEMHYAGSPGGVYASLFTCGIAVPHMIASGDQRLIDTYVRPTLRGEKIGALAIT 148 (403)
T ss_dssp TTCTTBTSCGGGTCCBCCTHHHHHHHHHHHHTTCCHHHHHHHSTHHHHSHHHHHHTCHHHHHHTHHHHHTTSSCEEEECC
T ss_pred CCCCcCCCChhhCCCCCCHHHHHHHHHHHHHhCCchhhhHHHhhhhhHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEec
Confidence 599999999999999999999999999999999987 5545444446667789999999999999999999976 78999
Q ss_pred CCCCCCCccHH-------------------------HHHHHHHHHHhhCC----Cc-eeEeeechh-h-hHHHHHhcCCH
Q psy5139 80 QEYGGPGLSFM-------------------------TDILIVEEIARVDP----SV-SILVDIQNT-L-VNDLIIKLGTT 127 (216)
Q Consensus 80 e~~gG~~~~~~-------------------------~~~~v~e~lar~~~----~~-~~~v~~~~~-~-~~~~~~~~g~~ 127 (216)
||.+|+|...+ .+.+++ +++++. ++ .|+|+.+.+ + +.....++|.+
T Consensus 149 Ep~~Gsd~~~~~t~A~~~~~g~~lnG~K~~vs~a~~Ad~~~v--~a~~~~~~~~g~~~flV~~~~pGv~v~~~~~~~G~~ 226 (403)
T 3p4t_A 149 EPGGGSDVGHLRTRADLDGDHYVINGAKTYITSGVRADYVVT--AARTGGPGAGGVSLIVVDKGTPGFEVTRKLDKMGWR 226 (403)
T ss_dssp BTTBSSCGGGCCCEEEEETTEEEEEEEEEEEETTTTCSEEEE--EEECSSSSGGGEEEEEEETTCTTEEEEEECCBSSCT
T ss_pred CCCCCCCcccceEEEEEeCCEEEEEEEEEEecCCcccCEEEE--EEEeCCCCCCceEEEEEeCCCCCeEecCCCCcccCC
Confidence 99999986421 133344 566653 23 367776542 2 21223455543
Q ss_pred --HHhhhhchhc---ccccccccccchhhhhhhhccccCCceeeccceeeeecCcccCCCcceeeeeec---------cc
Q psy5139 128 --EQKEKYLPRL---AQTDVSRTSRGYKALEWHAFYGRTDSLPLNDHLSHISSGCVGFDGQLKRWMVSC---------GL 193 (216)
Q Consensus 128 --~~~~~~l~~~---~~~~lg~~~~g~~~~~~~~~~~~~~~~~l~g~k~~va~~~~g~~~~~~~~~~~~---------~f 193 (216)
...+.+|+++ .+++++.++.|+......+...| ..+++..+|. ++.+++. +|
T Consensus 227 ~~~~~~v~fddv~Vp~~~~lg~~~~g~~~~~~~l~~~r----------~~~aa~~~G~----a~~al~~a~~~a~~R~~f 292 (403)
T 3p4t_A 227 SSDTAELSYTDVRVPVANLVGSENTGFAQIAAAFVAER----------VGLATQAYAG----AQRCLDLTVEWCRNRDTF 292 (403)
T ss_dssp TSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHHHHHHH----------HHHHHHHHHH----HHHHHHHHHHHHHHCEET
T ss_pred CCCeeEEEEcceEecHHHcCCCCCchHHHHHHHHHHHH----------HHHHHHHHHH----HHHHHHHHHHHHHhCccC
Confidence 4456778874 56788999999988777777777 8888888998 6666643 49
Q ss_pred cceeeeeeccc---ccccccccccC
Q psy5139 194 SLQILQFQNLS---SDMHMTGLASR 215 (216)
Q Consensus 194 g~~i~~~Q~v~---ad~~~~~~~~r 215 (216)
|+||++||.|| +||.+.++++|
T Consensus 293 g~pi~~~q~vq~~la~~~~~~~aar 317 (403)
T 3p4t_A 293 GRPLISRQAVQNTLAGMARRIDVAR 317 (403)
T ss_dssp TEEGGGSHHHHHHHHHHHHHHHHHH
T ss_pred CCcccccHHHHHHHHHHHHHHHHHH
Confidence 99999999999 99999999876
No 5
>3pfd_A Acyl-COA dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: FDA; 2.10A {Mycobacterium thermoresistibile}
Probab=99.87 E-value=1.4e-25 Score=181.54 Aligned_cols=197 Identities=24% Similarity=0.368 Sum_probs=152.0
Q ss_pred CccccccCCCCCCCCCCCHHHHHHHHHHHHccCCChhHHHHHHHhhHHHHHHhcCChhHHHHHHHHHHhCCce-eeecCC
Q psy5139 2 TTLLGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEKYLPRLAQTDLM-GVEIPQ 80 (216)
Q Consensus 2 ~G~~~~~~p~~~GG~g~~~~~~~~~~ee~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~l~~g~~~-~~~~~e 80 (216)
.||+++.+|++|||.|+++.+.+.+.||+++.+.+++..+..+. +....+..+++++|+++|++++.+|+.+ +++++|
T Consensus 62 ~G~~~~~~P~~~GG~g~~~~~~~~v~eela~~~~~~~~~~~~~~-~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tE 140 (393)
T 3pfd_A 62 SGFSAIHVPEEYGGQGADSVATCIVIEEVARVDCSASLIPAVNK-LGTMGLILRGSEELKKQVLPAVASGEAMASYALSE 140 (393)
T ss_dssp HTCSCTTSCGGGTCCCCCHHHHHHHHHHHHTTCHHHHHHHHHHH-HTTHHHHHHCCHHHHHHHHHHHHTTSCCEEEECCB
T ss_pred CCCCCCCCChhHCCCCCCHHHHHHHHHHHHhhCchHHHHHHHHH-HHHHHHHHhCCHHHHHHHHHHHhCCCceeEEEEcC
Confidence 49999999999999999999999999999999998877555443 5556688999999999999999999975 789999
Q ss_pred CCCCCCccHH-------------------------HHHHHHHHHHhhCC-----Cc-eeEeeechh-hh-HHHHHhcCCH
Q psy5139 81 EYGGPGLSFM-------------------------TDILIVEEIARVDP-----SV-SILVDIQNT-LV-NDLIIKLGTT 127 (216)
Q Consensus 81 ~~gG~~~~~~-------------------------~~~~v~e~lar~~~-----~~-~~~v~~~~~-~~-~~~~~~~g~~ 127 (216)
|.+|+|...+ .+.+++ ++++++ ++ .|+|+.+.+ +. ..+..++|.+
T Consensus 141 p~~gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v--~a~~~~~~~~~g~~~flV~~~~pGv~v~~~~~~~G~~ 218 (393)
T 3pfd_A 141 REAGSDAASMRTRAVADGDDWILNGSKCWITNGGKSTWYTV--MAVTDPDKGANGISAFMVHKDDEGFTVGPKERKLGIK 218 (393)
T ss_dssp TTBSSCGGGCCCEEEEETTEEEEEEEEEEEETTTTCSEEEE--EEESCGGGGGGGEEEEEEETTSTTEEEEEECCBSSCT
T ss_pred CCCCCCcccCeeEEEEcCCEEEEeeEEEEecCCcccCEEEE--EEEeCCCCCCCceEEEEEECCCCCeEecCCCCcccCC
Confidence 9999986421 123333 555542 23 367776542 21 1334455633
Q ss_pred --HHhhhhchhc---ccccccccccchhhhhhhhccccCCceeeccceeeeecCcccCCCcceeeeeec---------cc
Q psy5139 128 --EQKEKYLPRL---AQTDVSRTSRGYKALEWHAFYGRTDSLPLNDHLSHISSGCVGFDGQLKRWMVSC---------GL 193 (216)
Q Consensus 128 --~~~~~~l~~~---~~~~lg~~~~g~~~~~~~~~~~~~~~~~l~g~k~~va~~~~g~~~~~~~~~~~~---------~f 193 (216)
...+.+|+++ .++.++.++.|++.....+...| ..+++..+|. ++.+++. +|
T Consensus 219 ~~~~~~v~fddv~Vp~~~~lg~~g~g~~~~~~~l~~~r----------~~~aa~~~G~----a~~al~~a~~~a~~R~~f 284 (393)
T 3pfd_A 219 GSPTTELYFENCRIPGDRIIGEPGTGFKTALATLDHTR----------PTIGAQAVGI----AQGALDAAIAYTKERKQF 284 (393)
T ss_dssp TSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHHHHTTH----------HHHHHHHHHH----HHHHHHHHHHHHHHCEET
T ss_pred CCCceEEEEccEEEcHHHcCCCCCchHHHHHHHHHHHH----------HHHHHHHHHH----HHHHHHHHHHHHhcCccC
Confidence 4566788875 46788999999988877777777 8888888988 6666543 49
Q ss_pred cceeeeeeccc---ccccccccccC
Q psy5139 194 SLQILQFQNLS---SDMHMTGLASR 215 (216)
Q Consensus 194 g~~i~~~Q~v~---ad~~~~~~~~r 215 (216)
|+||++||.|| +||.++++++|
T Consensus 285 g~~i~~~q~vq~~la~~~~~~~aar 309 (393)
T 3pfd_A 285 GRPVSDNQGVQFMLADMAMKIEAAR 309 (393)
T ss_dssp TEEGGGSHHHHHHHHHHHHHHHHHH
T ss_pred CcchhhhHHHHHHHHHHHHHHHHHH
Confidence 99999999999 99999999887
No 6
>2d29_A Acyl-COA dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; HET: FAD; 1.65A {Thermus thermophilus} SCOP: a.29.3.1 e.6.1.1 PDB: 1ws9_A 2cx9_A*
Probab=99.87 E-value=2.2e-25 Score=180.02 Aligned_cols=198 Identities=26% Similarity=0.373 Sum_probs=152.8
Q ss_pred CccccccCCCCCCCCCCCHHHHHHHHHHHHccCCChhHHHHHHHhhHHHHHHhcCChhHHHHHHHHHHhCCce-eeecCC
Q psy5139 2 TTLLGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEKYLPRLAQTDLM-GVEIPQ 80 (216)
Q Consensus 2 ~G~~~~~~p~~~GG~g~~~~~~~~~~ee~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~l~~g~~~-~~~~~e 80 (216)
.||+++.+|++|||.|+++.+.+.+.||+++.+.+++..+..|..++...|..+++++|+++|++++.+|+.+ +++++|
T Consensus 50 ~Gl~~~~~P~~~GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tE 129 (387)
T 2d29_A 50 FGVFGALVPEAYGGAGLSTRLFARMVEAIAYYDGALALTVASHNSLATGHILLAGSEAQKEAFLPKLASGEALGAWGLTE 129 (387)
T ss_dssp TTGGGSSSCGGGTCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHTHHHHHHHHCCHHHHHHHHHHHHTSSSCEEEECCB
T ss_pred CCCCCCCCChhhCCCCCCHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhCCCceEEEEeCC
Confidence 6999999999999999999999999999999998887666555446677889999999999999999999975 789999
Q ss_pred CCCCCCccHH-------------------------HHHHHHHHHHhhCC---------Cce-eEeeechh-h-hHHHHHh
Q psy5139 81 EYGGPGLSFM-------------------------TDILIVEEIARVDP---------SVS-ILVDIQNT-L-VNDLIIK 123 (216)
Q Consensus 81 ~~gG~~~~~~-------------------------~~~~v~e~lar~~~---------~~~-~~v~~~~~-~-~~~~~~~ 123 (216)
|.+|+|...+ .+.+++ +++++. +++ |+|+.+.+ + +.....+
T Consensus 130 p~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v--~a~~~~~~~~~~~~~g~~~flV~~~~pGv~v~~~~~~ 207 (387)
T 2d29_A 130 PGSGSDAAALKTKAEKVEGGWRLNGTKQFITQGSVAGVYVV--MARTDPPPSPERKHQGISAFAFFRPERGLKVGRKEEK 207 (387)
T ss_dssp TTBSSSGGGCCCEEEEETTEEEEEEEEEEEETTTTCSEEEE--EEECSCCSCGGGTTTTEEEEEEECCSSSEEECCCCCC
T ss_pred CCCCCCHhhCceEEEEeCCEEEEEeEEeccCCCCcCCEEEE--EEEeCCccccCCCCCCeEEEEEeCCCCCeeccCcccc
Confidence 9999886321 133344 566542 233 77876542 2 2233445
Q ss_pred cCCH--HHhhhhchhc---ccccccccccchhhhhhhhccccCCceeeccceeeeecCcccCCCcceeeeeec-------
Q psy5139 124 LGTT--EQKEKYLPRL---AQTDVSRTSRGYKALEWHAFYGRTDSLPLNDHLSHISSGCVGFDGQLKRWMVSC------- 191 (216)
Q Consensus 124 ~g~~--~~~~~~l~~~---~~~~lg~~~~g~~~~~~~~~~~~~~~~~l~g~k~~va~~~~g~~~~~~~~~~~~------- 191 (216)
+|.+ ...+..|+++ .++.++.++.|+......+...| ..+++..+|. ++.+++.
T Consensus 208 ~g~~~~~~~~v~f~~v~Vp~~~~lg~~~~g~~~~~~~l~~~r----------~~~aa~~~G~----a~~al~~a~~ya~~ 273 (387)
T 2d29_A 208 LGLTASDTAQLILEDLFVPEEALLGERGKGFYDVLRVLDGGR----------IGIAAMAVGL----GQAALDYALAYAKG 273 (387)
T ss_dssp SSCTTSCEEEEEEEEEEEEGGGEESSTTBHHHHHHHHHHHHH----------HHHHHHHHHH----HHHHHHHHHHHHHH
T ss_pred cCCCCCCeeEEEEeeEEECHHHcCCCCCccHHHHHHHHHHHH----------HHHHHHHHHH----HHHHHHHHHHHHHh
Confidence 6643 4556778875 56788988889888777777777 8888888998 6666543
Q ss_pred --cccceeeeeeccc---ccccccccccC
Q psy5139 192 --GLSLQILQFQNLS---SDMHMTGLASR 215 (216)
Q Consensus 192 --~fg~~i~~~Q~v~---ad~~~~~~~~r 215 (216)
+||+||++||.|| +||.++++++|
T Consensus 274 R~~fg~~i~~~q~vq~~la~~~~~~~aar 302 (387)
T 2d29_A 274 REAFGRPIAEFEGVSFKLAEAATELEAAR 302 (387)
T ss_dssp CEETTEEGGGSHHHHHHHHHHHHHHHHHH
T ss_pred CccCCcchHhhHHHHHHHHHHHHHHHHHH
Confidence 4999999999999 99999999876
No 7
>1rx0_A Acyl-COA dehydrogenase family member 8, mitochondrial; flavoprotein, coenzyme A, oxidoreductase; HET: FAD 2MC; 1.77A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1
Probab=99.87 E-value=3.6e-25 Score=179.11 Aligned_cols=197 Identities=23% Similarity=0.299 Sum_probs=147.9
Q ss_pred CccccccCCCCCCCCCCCHHHHHHHHHHHHccCCChhHHHHHHHhhHHHHHHhcCChhHHHHHHHHHHhCCce-eeecCC
Q psy5139 2 TTLLGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEKYLPRLAQTDLM-GVEIPQ 80 (216)
Q Consensus 2 ~G~~~~~~p~~~GG~g~~~~~~~~~~ee~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~l~~g~~~-~~~~~e 80 (216)
.||+++.+|++|||.|+++.+.+.+.||+++.+.+.+..+..+. +....|..+++++|+++|+|++.+|+.+ +++++|
T Consensus 62 ~Gl~~l~~P~e~GG~g~~~~~~~~v~eela~~~~~~~~~~~~~~-~~~~~l~~~g~~~qk~~~l~~~~~G~~~~~~a~tE 140 (393)
T 1rx0_A 62 LGFGGVYIQTDVGGSGLSRLDTSVIFEALATGCTSTTAYISIHN-MCAWMIDSFGNEEQRHKFCPPLCTMEKFASYCLTE 140 (393)
T ss_dssp TTCSSTTSCGGGTCCCCCHHHHHHHHHHHHTTCHHHHHHHHHHH-HHHHHHHHHSCHHHHHHHHHHHHTTSSCEEEECCB
T ss_pred CCCCcCCCChhhCCCCCCHHHHHHHHHHHHHhCcchhHHHHHhH-HHHHHHHHHCCHHHHHHHHHHHhCCCceEEEEecC
Confidence 59999999999999999999999999999999988766665544 5667788999999999999999999976 689999
Q ss_pred CCCCCCccHH-------------------------HHHHHHHHHHhhCC----Cce-eEeeechh-h-hHHHHHhcCCH-
Q psy5139 81 EYGGPGLSFM-------------------------TDILIVEEIARVDP----SVS-ILVDIQNT-L-VNDLIIKLGTT- 127 (216)
Q Consensus 81 ~~gG~~~~~~-------------------------~~~~v~e~lar~~~----~~~-~~v~~~~~-~-~~~~~~~~g~~- 127 (216)
|.+|+|.... .+.+++ +++++. +++ |+|+.+.+ + +.....++|.+
T Consensus 141 p~~gsd~~~~~t~A~~~~~g~~lnG~K~~is~a~~Ad~~~v--~a~~~~~~~~g~~~flV~~~~pGv~v~~~~~~~g~~~ 218 (393)
T 1rx0_A 141 PGSGSDAASLLTSAKKQGDHYILNGSKAFISGAGESDIYVV--MCRTGGPGPKGISCIVVEKGTPGLSFGKKEKKVGWNS 218 (393)
T ss_dssp TTBSSSGGGCCCEEEEETTEEEEEEEEEEEETTTTCSEEEE--EEESSSSSGGGEEEEEEETTCTTEEECCCCCBSSCTT
T ss_pred CCCCcCcccceeEEEEcCCEEEEEeEEEeecCCccCCEEEE--EEEcCCCCCCceEEEEEeCCCCCeEecCcccccccCC
Confidence 9999886321 122333 555532 133 66776532 1 11112334433
Q ss_pred -HHhhhhchhc---ccccccccccchhhhhhhhccccCCceeeccceeeeecCcccCCCcceeeeeec---------ccc
Q psy5139 128 -EQKEKYLPRL---AQTDVSRTSRGYKALEWHAFYGRTDSLPLNDHLSHISSGCVGFDGQLKRWMVSC---------GLS 194 (216)
Q Consensus 128 -~~~~~~l~~~---~~~~lg~~~~g~~~~~~~~~~~~~~~~~l~g~k~~va~~~~g~~~~~~~~~~~~---------~fg 194 (216)
...+.+|+++ .+++++.++.|++.....+...| ..+++..+|. ++.+++. +||
T Consensus 219 ~~~~~v~fd~v~Vp~~~~lg~~g~g~~~~~~~l~~~r----------~~~aa~~~G~----a~~al~~a~~ya~~R~~fG 284 (393)
T 1rx0_A 219 QPTRAVIFEDCAVPVANRIGSEGQGFLIAVRGLNGGR----------INIASCSLGA----AHASVILTRDHLNVRKQFG 284 (393)
T ss_dssp SCEEEEEEEEEEEEGGGEESSTTCHHHHHHHHHHHHH----------HHHHHHHHHH----HHHHHHHHHHHHHHCEETT
T ss_pred CCceEEEEcCeEeCHHHcCCCCCchHHHHHHHHHHHH----------HHHHHHHHHH----HHHHHHHHHHHHHhCccCC
Confidence 3456778774 46788888888887776666666 8888888888 6666543 499
Q ss_pred ceeeeeeccc---ccccccccccC
Q psy5139 195 LQILQFQNLS---SDMHMTGLASR 215 (216)
Q Consensus 195 ~~i~~~Q~v~---ad~~~~~~~~r 215 (216)
+||++||.|| +||.++++++|
T Consensus 285 ~~i~~~q~vq~~la~~~~~~~aar 308 (393)
T 1rx0_A 285 EPLASNQYLQFTLADMATRLVAAR 308 (393)
T ss_dssp EEGGGCHHHHHHHHHHHHHHHHHH
T ss_pred CchhhhHHHHHHHHHHHHHHHHHH
Confidence 9999999999 99999999886
No 8
>3r7k_A Probable acyl COA dehydrogenase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: FDA; 2.50A {Mycobacterium abscessus}
Probab=99.87 E-value=1.9e-25 Score=181.25 Aligned_cols=198 Identities=16% Similarity=0.209 Sum_probs=151.5
Q ss_pred CccccccCCCCCCCCCCCHHHHHHHHHHHHcc-CCChhHHHHHHHhhHHHHHHhcCChhHHHHHHHHHHhCCce-eeecC
Q psy5139 2 TTLLGVEIPQEYGGPGLSFMTDILIVEEIARV-DPSVSILVDIQNTLVNDLIIKLGTTEQKEKYLPRLAQTDLM-GVEIP 79 (216)
Q Consensus 2 ~G~~~~~~p~~~GG~g~~~~~~~~~~ee~~~~-~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~l~~g~~~-~~~~~ 79 (216)
.||+++.+|++|||.|+++.+.+.+.||+++. ++++...+..+..++...|..+++++|+++|++++.+|+.+ +++++
T Consensus 72 ~Gl~~l~~P~e~GG~g~~~~~~~~v~eela~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~t 151 (403)
T 3r7k_A 72 VGLLGIGFPEEVGGSGGNAIDSALVTEAILAAGGSTGVCAALFTHGIALPHIAANGSDALIERYVRPTLAGKMIGSLGVT 151 (403)
T ss_dssp HTCTTBTSCGGGTCCBCCHHHHHHHHHHHHHTTCCHHHHHHHCTHHHHSHHHHHHCCHHHHHHHHHHHHTTSCCEEEECC
T ss_pred CCCCcCCCChhhCCCCCCHHHHHHHHHHHHhcCCchHHHHHHHHhhHHHHHHHHhCCHHHHHHHHHHHhCCCeeEEEEec
Confidence 49999999999999999999999999999998 66654444323446677889999999999999999999976 78999
Q ss_pred CCCCCCCccHH-------------------------HHHHHHHHHHhhCC----Cce-eEeeechh-h-hHHHHHhcCCH
Q psy5139 80 QEYGGPGLSFM-------------------------TDILIVEEIARVDP----SVS-ILVDIQNT-L-VNDLIIKLGTT 127 (216)
Q Consensus 80 e~~gG~~~~~~-------------------------~~~~v~e~lar~~~----~~~-~~v~~~~~-~-~~~~~~~~g~~ 127 (216)
||.+|+|+..+ .+.+++ +++++. +++ |+|+.+.+ + +.....++|.+
T Consensus 152 Ep~~Gsd~~~~~t~A~~~~~g~~lnG~K~~vs~a~~Ad~~~v--~a~~~~~~~~g~~~flV~~~~pGv~v~~~~~~~G~~ 229 (403)
T 3r7k_A 152 EPGAGSDVANLRTRAVREGDTYVVNGAKTFITSGVRADFVTT--AVRTGGPGYGGVSLLVIDKNSPGFEVSRRLDKMGWR 229 (403)
T ss_dssp BTTBSSCGGGCCCEEEECSSEEEEEEEEEEEETTTTCSEEEE--EEECSSSSGGGEEEEEEETTCTTEEEEEECCBSSCT
T ss_pred CCCCCCChhhceEEEEEECCEEEEEEEEEcccCCccCCEEEE--EEEcCCCCCCceEEEEEeCCCCCeEecCcccccCCC
Confidence 99999886421 133334 566654 233 67776542 2 21334455544
Q ss_pred --HHhhhhchhc---ccccccccccchhhhhhhhccccCCceeeccceeeeecCcccCCCcceeeeeec---------cc
Q psy5139 128 --EQKEKYLPRL---AQTDVSRTSRGYKALEWHAFYGRTDSLPLNDHLSHISSGCVGFDGQLKRWMVSC---------GL 193 (216)
Q Consensus 128 --~~~~~~l~~~---~~~~lg~~~~g~~~~~~~~~~~~~~~~~l~g~k~~va~~~~g~~~~~~~~~~~~---------~f 193 (216)
...+..|+++ .+++++.++.|+......+...| ..+++..+|. ++.+++. +|
T Consensus 230 ~~~~~~v~fd~v~Vp~~~~lg~~~~g~~~~~~~l~~~r----------~~~aa~~~G~----a~~al~~a~~ya~~R~~f 295 (403)
T 3r7k_A 230 CSDTAELSFVDVRVPADNLVGAENSGFLQIMQQFQAER----------LGIAVQAYAT----AGRALDLAKSWARERETF 295 (403)
T ss_dssp TSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHTHHHHH----------HHHHHHHHHH----HHHHHHHHHHHHHHCEET
T ss_pred CCCceEEEEeeEEECHHHcCCCCCchHHHHHHHHHHHH----------HHHHHHHHHH----HHHHHHHHHHHHHcCccC
Confidence 4456778874 56788999999988877777777 8888888998 6666643 49
Q ss_pred cceeeeeeccc---ccccccccccC
Q psy5139 194 SLQILQFQNLS---SDMHMTGLASR 215 (216)
Q Consensus 194 g~~i~~~Q~v~---ad~~~~~~~~r 215 (216)
|+||++||.|| +||.+.++++|
T Consensus 296 g~~i~~~q~vq~~la~~~~~~~aar 320 (403)
T 3r7k_A 296 GRPLTGRQIIRHKLAEMARQVDVAC 320 (403)
T ss_dssp TEEGGGSHHHHHHHHHHHHHHHHHH
T ss_pred CCchhhcHHHHHHHHHHHHHHHHHH
Confidence 99999999999 99999999886
No 9
>1ivh_A Isovaleryl-COA dehydrogenase; oxidoreductase, acyl-COA dehydrogenase, flavoprotein, isovaleric acidemia; HET: FAD COS; 2.60A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1
Probab=99.86 E-value=3.7e-25 Score=179.14 Aligned_cols=198 Identities=25% Similarity=0.435 Sum_probs=150.5
Q ss_pred CccccccCCCCCCCCCCCHHHHHHHHHHHHccCCChhHHHHHHHhhHHHHHHhcCChhHHHHHHHHHHhCCce-eeecCC
Q psy5139 2 TTLLGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEKYLPRLAQTDLM-GVEIPQ 80 (216)
Q Consensus 2 ~G~~~~~~p~~~GG~g~~~~~~~~~~ee~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~l~~g~~~-~~~~~e 80 (216)
.||+++.+|++|||.|+++.+.+.+.||+++.+.+++..+..|..++...|..+++++|+++|+|++.+|+.+ +++++|
T Consensus 58 ~Gl~~l~~P~e~GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~l~~G~~~~~~a~tE 137 (394)
T 1ivh_A 58 LGVLGITAPVQYGGSGLGYLEHVLVMEEISRASGAVGLSYGAHSNLCINQLVRNGNEAQKEKYLPKLISGEYIGALAMSE 137 (394)
T ss_dssp HTCTTTTSCGGGTCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHTTTHHHHHHHCCHHHHHHHHHHHHHTSSCEEEECCB
T ss_pred CCCCCCCCCcccCCCCCCHHHHHHHHHHHHhhchhHHHHHHHhhHHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEecC
Confidence 4899999999999999999999999999999999887766655446677889999999999999999999975 789999
Q ss_pred CCCCCCccHH-------------------------HHHHHHHHHHhhCC-------Cc-eeEeeechh-h-hHHHHHhcC
Q psy5139 81 EYGGPGLSFM-------------------------TDILIVEEIARVDP-------SV-SILVDIQNT-L-VNDLIIKLG 125 (216)
Q Consensus 81 ~~gG~~~~~~-------------------------~~~~v~e~lar~~~-------~~-~~~v~~~~~-~-~~~~~~~~g 125 (216)
|.+|+|.... .+.+++ +++++. ++ .|+|+.+.+ + +.....++|
T Consensus 138 p~~gsd~~~~~t~A~~~~~g~~lnG~K~~vs~~~~Ad~~~v--~ar~~~~~~~~~~g~~~flV~~~~pGv~v~~~~~~~G 215 (394)
T 1ivh_A 138 PNAGSDVVSMKLKAEKKGNHYILNGNKFWITNGPDADVLIV--YAKTDLAAVPASRGITAFIVEKGMPGFSTSKKLDKLG 215 (394)
T ss_dssp TTBSSSGGGCCCEEEECSSEEEEEEEEEEEETGGGCSEEEE--EEESCTTCSSGGGGEEEEEEETTCTTEEECCCCCBSS
T ss_pred CCCCcCcccceEEEEEcCCEEEEEeEEEeeCCCCcCCEEEE--EEEeCCcccCCCCCeEEEEEeCCCCCeEecccccccc
Confidence 9999885321 133344 566542 22 367776532 1 112223445
Q ss_pred CH--HHhhhhchhc---ccccccccccchhhhhhhhccccCCceeeccceeeeecCcccCCCcceeeeeec---------
Q psy5139 126 TT--EQKEKYLPRL---AQTDVSRTSRGYKALEWHAFYGRTDSLPLNDHLSHISSGCVGFDGQLKRWMVSC--------- 191 (216)
Q Consensus 126 ~~--~~~~~~l~~~---~~~~lg~~~~g~~~~~~~~~~~~~~~~~l~g~k~~va~~~~g~~~~~~~~~~~~--------- 191 (216)
.+ ...+..|+++ .++.++.++.|++.....+...| ..+++..+|. ++.+++.
T Consensus 216 ~~~~~~~~v~fd~v~Vp~~~~lg~~~~g~~~~~~~l~~~r----------~~~aa~~~G~----a~~al~~a~~ya~~R~ 281 (394)
T 1ivh_A 216 MRGSNTCELIFEDCKIPAANILGHENKGVYVLMSGLDLER----------LVLAGGPLGL----MQAVLDHTIPYLHVRE 281 (394)
T ss_dssp CTTSCEEEEEEEEEEEEGGGEESCTTCHHHHHHHHHHHHH----------HHHTHHHHHH----HHHHHHHHHHHHTTCE
T ss_pred CCCCCeeEEEECcEEEcHHHcCCCCCchHHHHHHHHHHHH----------HHHHHHHHHH----HHHHHHHHHHHHHhCe
Confidence 43 3456678774 46788988889887777776676 8888888888 6665543
Q ss_pred cccceeeeeeccc---ccccccccccC
Q psy5139 192 GLSLQILQFQNLS---SDMHMTGLASR 215 (216)
Q Consensus 192 ~fg~~i~~~Q~v~---ad~~~~~~~~r 215 (216)
+||+||++||.|| +||++.++++|
T Consensus 282 ~fg~~i~~~q~vq~~la~~~~~~~aar 308 (394)
T 1ivh_A 282 AFGQKIGHFQLMQGKMADMYTRLMACR 308 (394)
T ss_dssp ETTEEGGGSHHHHHHHHHHHHHHHHHH
T ss_pred eCCcchhccHHHHHHHHHHHHHHHHHH
Confidence 4999999999999 99999999876
No 10
>3nf4_A Acyl-COA dehydrogenase; seattle structural genomics center for infectious disease, S FAD, FADH, tuberculosis, oxidoredu; HET: FAD; 2.35A {Mycobacterium thermoresistibile}
Probab=99.86 E-value=3.5e-25 Score=178.94 Aligned_cols=197 Identities=22% Similarity=0.362 Sum_probs=147.4
Q ss_pred CccccccCCCCCCCCCCCHHHHHHHHHHHHccCCChhHHHHHHHhhHHHHHHhcCChhHHHHHHHHHHhCCce-eeecCC
Q psy5139 2 TTLLGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEKYLPRLAQTDLM-GVEIPQ 80 (216)
Q Consensus 2 ~G~~~~~~p~~~GG~g~~~~~~~~~~ee~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~l~~g~~~-~~~~~e 80 (216)
.||+++.+|++|||.|+++.+.+.+.||+++.+.++++.+..|. ++...+..+++++|+++|++++.+|+.+ +++++|
T Consensus 59 ~G~~~~~~P~~~GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~~-~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tE 137 (387)
T 3nf4_A 59 AGLLSLPQPEEWGGGGQPYEVYLQVLEEIAARWASVAVAVSVHS-LSSHPLLVFGTEEQKKRWLPGMLSGEQIGAYSLSE 137 (387)
T ss_dssp TTTTSTTSCGGGTCCCCCHHHHHHHHHHHHTTCHHHHHHHHHHH-HHTHHHHHHSCHHHHHHHHHHHTTSSCCEEEECCB
T ss_pred CCCCCCCCCHhhCCCCCCHHHHHHHHHHHHHhCchHHHHHHHHH-HHHHHHHHhCCHHHHHHHHHHHhCCCeeEEEEEcC
Confidence 59999999999999999999999999999999998887666554 6667789999999999999999999976 689999
Q ss_pred CCCCCCccHH-------------------------HHHHHHHHHHhhC---CCc-eeEeeechh-h-hHHHHHhcCCH--
Q psy5139 81 EYGGPGLSFM-------------------------TDILIVEEIARVD---PSV-SILVDIQNT-L-VNDLIIKLGTT-- 127 (216)
Q Consensus 81 ~~gG~~~~~~-------------------------~~~~v~e~lar~~---~~~-~~~v~~~~~-~-~~~~~~~~g~~-- 127 (216)
|.+|+|...+ .+.+++ +++++ .++ .|+|+.+.+ + ......++|.+
T Consensus 138 p~~gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v--~a~~~~~~~g~~~flV~~~~pGv~~~~~~~~~G~~~~ 215 (387)
T 3nf4_A 138 PQAGSDAAALRCAATPTDGGYVINGSKSWITHGGKADFYTL--FARTGEGSRGVSCFLVPADQPGLSFGKPEEKMGLHAV 215 (387)
T ss_dssp TTBSSCGGGCCCEEEEETTEEEEEEEEEEEETTTTCSEEEE--EEECC--CCCEEEEEEETTCTTEEECCCCCBSSCCSS
T ss_pred CCCCCChhhCEEEEEEeCCEEEEEeEEecccCCcccCEEEE--EEEeCCCCCceEEEEEECCCCCeEecCcccccccCCC
Confidence 9999986421 123333 55554 123 367776542 2 11223445543
Q ss_pred HHhhhhchhc---ccccccccccchhhhhhhhccccCCceeeccceeeeecCcccCCCcceeeeeec---------cccc
Q psy5139 128 EQKEKYLPRL---AQTDVSRTSRGYKALEWHAFYGRTDSLPLNDHLSHISSGCVGFDGQLKRWMVSC---------GLSL 195 (216)
Q Consensus 128 ~~~~~~l~~~---~~~~lg~~~~g~~~~~~~~~~~~~~~~~l~g~k~~va~~~~g~~~~~~~~~~~~---------~fg~ 195 (216)
...+.+|+++ .++.+|.++.|+......+...| ..+++..+|. ++.+++. +||+
T Consensus 216 ~~~~v~fd~v~Vp~~~~lg~~~~g~~~~~~~l~~~r----------~~~aa~~~G~----a~~al~~a~~~a~~R~~fg~ 281 (387)
T 3nf4_A 216 PTTSAFYDNARIDADRRIGEEGQGLQIAFSALDSGR----------LGIAAVATGL----AQAALDEAVAYANERTAFGR 281 (387)
T ss_dssp CEEEEEEEEEEEEGGGEESSTTCHHHHHHHTHHHHH----------HHHHHHHHHH----HHHHHHHHHHHHHC------
T ss_pred CeeEEEEeeEEecHHHcCCCCCchHHHHHHHHHHHH----------HHHHHHHHHH----HHHHHHHHHHHHHhCeeCCC
Confidence 3456778775 46788999999988777777777 8888888988 6665543 4999
Q ss_pred eeeeeeccc---ccccccccccC
Q psy5139 196 QILQFQNLS---SDMHMTGLASR 215 (216)
Q Consensus 196 ~i~~~Q~v~---ad~~~~~~~~r 215 (216)
||++||.|| +||++.++++|
T Consensus 282 ~i~~~q~v~~~la~~~~~~~aar 304 (387)
T 3nf4_A 282 KIIDHQGLGFLLADMAAAVATAR 304 (387)
T ss_dssp CTTTC-CHHHHHHHHHHHHHHHH
T ss_pred chhhhHHHHHHHHHHHHHHHHHH
Confidence 999999999 99999999876
No 11
>3owa_A Acyl-COA dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-structure, beta-barrel; HET: MSE FAD 1PE; 1.97A {Bacillus anthracis}
Probab=99.86 E-value=4.4e-25 Score=186.35 Aligned_cols=197 Identities=24% Similarity=0.345 Sum_probs=149.2
Q ss_pred CccccccCCCCCCCCCCCHHHHHHHHHHHHccCCChhHHHHHHHhhHHHHHHhcCChhHHHHHHHHHHhCCce-eeecCC
Q psy5139 2 TTLLGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEKYLPRLAQTDLM-GVEIPQ 80 (216)
Q Consensus 2 ~G~~~~~~p~~~GG~g~~~~~~~~~~ee~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~l~~g~~~-~~~~~e 80 (216)
+||+++.+|++|||.|+++.+...+.|++++.+.+ ...+..|..++...+..+|+++|+++|+|++.+|+++ +++++|
T Consensus 77 ~Gl~gl~vPee~GG~G~~~~~~~~v~Eel~~~~~~-~~~~~~~~~~~~~~l~~~Gt~eQk~~~Lp~la~Ge~~~a~alTE 155 (597)
T 3owa_A 77 LGLLGADVPEEYGGIGLDKVSSALIAEKFSRAGGF-AITHGAHVGIGSLPIVLFGNEEQKKKYLPLLATGEKLAAYALTE 155 (597)
T ss_dssp TTTTCTTSCGGGTCCCCCHHHHHHHHHHHGGGTHH-HHHHHHHHTTTTHHHHHHCCHHHHHHHHHHHHHTSSCEEEECCB
T ss_pred CCCCcCCCChhhCCCCCCHHHHHHHHHHHHccchH-HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHhCCCcceeeEecC
Confidence 59999999999999999999999999999998533 3334444445555688899999999999999999986 689999
Q ss_pred CCCCCCccHH---------------------------HHHHHHHHHHhhCC-Cce-eEeeechh-h-hHHHHHhcCCH--
Q psy5139 81 EYGGPGLSFM---------------------------TDILIVEEIARVDP-SVS-ILVDIQNT-L-VNDLIIKLGTT-- 127 (216)
Q Consensus 81 ~~gG~~~~~~---------------------------~~~~v~e~lar~~~-~~~-~~v~~~~~-~-~~~~~~~~g~~-- 127 (216)
|.+|+|+... .+++++ ++|+++ +++ |+|+.+.+ + +.....++|.+
T Consensus 156 p~aGSD~~~~~T~A~~~~dG~~yvLnG~K~~is~a~~Ad~~lV--~Art~~~g~s~flV~~~~pGv~v~~~~~~~Glrgs 233 (597)
T 3owa_A 156 PGSGSDALGAKTTARLNAEGTHYVLNGEKQWITNSAFADVFIV--YAKIDGEHFSAFIVEKDYAGVSTSPEEKKMGIKCS 233 (597)
T ss_dssp TTBSSSGGGCCCEEEECTTSSEEEEEEEEEEEETTTTCSEEEE--EEEETTTEEEEEEEETTSTTEEECCCCCBSSCTTS
T ss_pred CCCCCCcccceeEEEEeCCCCEEEEeeEEEEeCCCccCCEEEE--EEEeCCCceEEEEEeCCCCCeEEecccccccCCCC
Confidence 9999876321 133344 566654 333 77776542 2 22222345544
Q ss_pred HHhhhhchhc---ccccccccccchhhhhhhhccccCCceeeccceeeeecCcccCCCcceeeeeec---------cccc
Q psy5139 128 EQKEKYLPRL---AQTDVSRTSRGYKALEWHAFYGRTDSLPLNDHLSHISSGCVGFDGQLKRWMVSC---------GLSL 195 (216)
Q Consensus 128 ~~~~~~l~~~---~~~~lg~~~~g~~~~~~~~~~~~~~~~~l~g~k~~va~~~~g~~~~~~~~~~~~---------~fg~ 195 (216)
...+.+|+++ .++++|+++.|+......++..| ..+++..+|. ++++++. +||+
T Consensus 234 ~t~~v~fddV~VP~~~lLG~~g~G~~~~~~~l~~~R----------~~~aa~~lG~----a~~al~~a~~ya~~R~qfG~ 299 (597)
T 3owa_A 234 STRTLILEDALVPKENLLGEIGKGHIIAFNILNIGR----------YKLGVGTVGS----AKRAVEISAQYANQRQQFKQ 299 (597)
T ss_dssp CEEEEEEEEEEEEGGGEESSTTCHHHHHHHHHHHHH----------HHHHHHHHHH----HHHHHHHHHHHHHHCEETTE
T ss_pred CceEEEEeceeecHHHhcCcccchHHHHHHhhHhHH----------HHHHHHHHHH----HHHHHHHHHHHHHhCeeCCc
Confidence 3456678774 56789999999988888888777 8888889998 6666643 4999
Q ss_pred eeeeeeccc---ccccccccccC
Q psy5139 196 QILQFQNLS---SDMHMTGLASR 215 (216)
Q Consensus 196 ~i~~~Q~v~---ad~~~~~~~~r 215 (216)
||++||.|| +||.+.++++|
T Consensus 300 pi~~~q~vq~~LA~m~~~~~aar 322 (597)
T 3owa_A 300 PIARFPLIQEKLANMAAKTYAAE 322 (597)
T ss_dssp EGGGSHHHHHHHHHHHHHHHHHH
T ss_pred cccccHHHHHHHHHHHHHHHHHH
Confidence 999999999 99999999876
No 12
>1ukw_A Acyl-COA dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: FAD; 2.40A {Thermus thermophilus} SCOP: a.29.3.1 e.6.1.1
Probab=99.86 E-value=2.6e-25 Score=179.21 Aligned_cols=197 Identities=23% Similarity=0.365 Sum_probs=149.8
Q ss_pred CccccccCCCCCCCCCCCHHHHHHHHHHHHccCCChhHHHHHHHhhHHHHHHhcCChhHHHHHHHHHHhCCce-eeecCC
Q psy5139 2 TTLLGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEKYLPRLAQTDLM-GVEIPQ 80 (216)
Q Consensus 2 ~G~~~~~~p~~~GG~g~~~~~~~~~~ee~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~l~~g~~~-~~~~~e 80 (216)
.||+++.+|++|||.|+++.+...+.||+++.+.+++..+..| .++...|..+++++|+++|+|++.+|+.+ +++++|
T Consensus 48 ~Gl~~~~~P~~~GG~g~~~~~~~~~~eel~~~~~~~~~~~~~~-~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tE 126 (379)
T 1ukw_A 48 VGLLNAIIPEEYGGMGLKMLDEVIVGEELAYACMGIYTIPMAS-DLGITPVLLAGTEEQKERFLRPLTEKPALAAFALSE 126 (379)
T ss_dssp TTCTTTTSCGGGTSCCCCHHHHHHHHHHHHHHCHHHHHHHHHH-HHHHHHHHHHCCHHHHHHHHGGGTSSSCEEEEECCB
T ss_pred CCCCCcCCChhhCCCCCCHHHHHHHHHHHHHhCchHHHHHHHH-HHHHHHHHHhCCHHHHHHHHHHHhCCCceEEEEecC
Confidence 5999999999999999999999999999999998887666555 36677889999999999999999999975 689999
Q ss_pred CCCCCCccHH-------------------------HHHHHHHHHHhhCC-----Cc-eeEeeechh-h-hHHHHHhcCCH
Q psy5139 81 EYGGPGLSFM-------------------------TDILIVEEIARVDP-----SV-SILVDIQNT-L-VNDLIIKLGTT 127 (216)
Q Consensus 81 ~~gG~~~~~~-------------------------~~~~v~e~lar~~~-----~~-~~~v~~~~~-~-~~~~~~~~g~~ 127 (216)
|.+|+|...+ .+.+++ +++++. ++ .|+|+.+.+ + +.....++|.+
T Consensus 127 p~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v--~a~~~~~~~~~g~~~flV~~~~~Gv~v~~~~~~~G~~ 204 (379)
T 1ukw_A 127 PGNGSDAAALKTRAIRQGDHYVLNGTKMWISNGGEAEWVVV--FATVNPELRHKGVVALVVERGTPGFKAIKIHGKMGQR 204 (379)
T ss_dssp TTBSSCGGGCCCEEEEETTEEEEEEEEEEEETTTTEEEEEE--EEESCGGGGGGGEEEEEEETTCTTEEEEECCCCSSCT
T ss_pred CCCCcChhhCeEEEEEeCCEEEEEEEEecccCCCcCCEEEE--EEEcCCCCCCCceEEEEEeCCCCCeEecCccccccCC
Confidence 9999876321 122333 555542 22 367776532 2 11223445543
Q ss_pred --HHhhhhchhc---ccccccccccchhhhhhhhccccCCceeeccceeeeecCcccCCCcceeeeeec---------cc
Q psy5139 128 --EQKEKYLPRL---AQTDVSRTSRGYKALEWHAFYGRTDSLPLNDHLSHISSGCVGFDGQLKRWMVSC---------GL 193 (216)
Q Consensus 128 --~~~~~~l~~~---~~~~lg~~~~g~~~~~~~~~~~~~~~~~l~g~k~~va~~~~g~~~~~~~~~~~~---------~f 193 (216)
...+.+|+++ .++.+|.++.|+......+...| ..+++..+|. ++.+++. +|
T Consensus 205 ~~~~~~v~fd~v~Vp~~~~lg~~~~g~~~~~~~l~~~r----------~~~aa~~~G~----a~~al~~~~~ya~~R~~f 270 (379)
T 1ukw_A 205 ASGTYELVFEDVKVPVENRLGEEGEGFKIAMQTLNKTR----------IPVAAGSVGV----ARRALDEARKYAKEREAF 270 (379)
T ss_dssp TSCEEEEEEEEEEEEGGGEESCTTCHHHHHHHHHHHHH----------HHHHHHHHHH----HHHHHHHHHHHHHHCBSS
T ss_pred CCCeeEEEEeeEEecHHhcCCCCCchHHHHHHHHHHHH----------HHHHHHHHHH----HHHHHHHHHHHHHhCeeC
Confidence 3456677775 46788888888887777666676 8888888888 6665543 49
Q ss_pred cceeeeeeccc---ccccccccccC
Q psy5139 194 SLQILQFQNLS---SDMHMTGLASR 215 (216)
Q Consensus 194 g~~i~~~Q~v~---ad~~~~~~~~r 215 (216)
|+||++||.|| +||.++++++|
T Consensus 271 g~~i~~~q~vq~~la~~~~~~~aar 295 (379)
T 1ukw_A 271 GEPIANFQAIQFKLVDMLIGIETAR 295 (379)
T ss_dssp SSBGGGSHHHHHHHHHHHHHHHHHH
T ss_pred CcchhhhHHHHHHHHHHHHHHHHHH
Confidence 99999999999 99999999876
No 13
>2pg0_A Acyl-COA dehydrogenase; GK1316, geobacillus kaustophilus HTA structural genomics, PSI, protein structure initiative; HET: FAD; 1.80A {Geobacillus kaustophilus}
Probab=99.86 E-value=7e-25 Score=177.02 Aligned_cols=196 Identities=22% Similarity=0.370 Sum_probs=149.9
Q ss_pred CccccccCCCCCCCCCCCHHHHHHHHHHHHccC-CChhHHHHHHHhhHHHHHHhcCChhHHHHHHHHHHhCCce-eeecC
Q psy5139 2 TTLLGVEIPQEYGGPGLSFMTDILIVEEIARVD-PSVSILVDIQNTLVNDLIIKLGTTEQKEKYLPRLAQTDLM-GVEIP 79 (216)
Q Consensus 2 ~G~~~~~~p~~~GG~g~~~~~~~~~~ee~~~~~-~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~l~~g~~~-~~~~~ 79 (216)
.||+++.+|++|||.|+++.+.+.+.||+++.+ .++++.+ |..++...|..+++++|+++|++++.+|+.+ +++++
T Consensus 53 ~Gl~~~~~P~~~GG~g~~~~~~~~v~eela~~~~~~~~~~~--~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~t 130 (385)
T 2pg0_A 53 NGFLCPWVDEKYGGLNADFAYSVVINEELEKVGSSLVGIGL--HNDIVTPYIASYGTEEQKQKWLPKCVTGELITAIAMT 130 (385)
T ss_dssp TTCSSTTSCGGGTCCCCCHHHHHHHHHHHHHHCGGGHHHHH--HHHTTHHHHHHHCCHHHHHHHHHHHHHTSSCEEEECC
T ss_pred CCCCCcCCChhhCCCCCCHHHHHHHHHHHHhhCCchHHHHH--HhhHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEeC
Confidence 599999999999999999999999999999999 7776544 4446677788999999999999999999975 78999
Q ss_pred CCCCCCCccHH-------------------------HHHHHHHHHHhhCC-------Cc-eeEeeechh-h-hHHHHHhc
Q psy5139 80 QEYGGPGLSFM-------------------------TDILIVEEIARVDP-------SV-SILVDIQNT-L-VNDLIIKL 124 (216)
Q Consensus 80 e~~gG~~~~~~-------------------------~~~~v~e~lar~~~-------~~-~~~v~~~~~-~-~~~~~~~~ 124 (216)
||.+|+|...+ .+.+++ +++++. ++ .|+|+.+.+ + +.....++
T Consensus 131 Ep~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v--~a~~~~~~~~~~~g~~~flV~~~~pGv~v~~~~~~~ 208 (385)
T 2pg0_A 131 EPGAGSDLANISTTAVKDGDYYIVNGQKTFITNGIHADLIVV--ACKTDPQAKPPHRGISLLVVERDTPGFTRGRKLEKV 208 (385)
T ss_dssp BTTBSSCGGGCCCEEEEETTEEEEEEEEEEETTTTTCSEEEE--EEESCTTCSSGGGGEEEEEEETTCTTEEECCCCCBS
T ss_pred CCCCCcCHhhCeEEEEEcCCEEEEEeEEecccCCcccCEEEE--EEEeCCccCCCCCceEEEEEeCCCCCeEecCCcccc
Confidence 99999886321 123344 566542 23 377776532 2 21233455
Q ss_pred CCH--HHhhhhchhc---ccccccccccchhhhhhhhccccCCceeeccceeeeecCcccCCCcceeeeeec--------
Q psy5139 125 GTT--EQKEKYLPRL---AQTDVSRTSRGYKALEWHAFYGRTDSLPLNDHLSHISSGCVGFDGQLKRWMVSC-------- 191 (216)
Q Consensus 125 g~~--~~~~~~l~~~---~~~~lg~~~~g~~~~~~~~~~~~~~~~~l~g~k~~va~~~~g~~~~~~~~~~~~-------- 191 (216)
|.+ ...+.+|+++ .+++++.++.|++.....+...| ..+++..+|. ++.+++.
T Consensus 209 g~~~~~~~~v~fd~v~Vp~~~~lg~~g~g~~~~~~~l~~~r----------~~~aa~~~G~----a~~al~~a~~ya~~R 274 (385)
T 2pg0_A 209 GLHAQDTAELFFQDAKVPAYNLLGEEGKGFYYLMEKLQQER----------LVVAIAAQTA----AEVMFSLTKQYVKQR 274 (385)
T ss_dssp SCTTSCCEEEEEEEEEEEGGGEESCTTCHHHHHHHHHHHHH----------HHHHHHHHHH----HHHHHHHHHHHHHHC
T ss_pred ccCCCceEEEEEcceEEcHHHcCCCCCchHHHHHHHHHHHH----------HHHHHHHHHH----HHHHHHHHHHHHhcC
Confidence 643 4456778774 56788988889888777777777 8888888888 6666543
Q ss_pred -cccceeeeeeccc---ccccccccccC
Q psy5139 192 -GLSLQILQFQNLS---SDMHMTGLASR 215 (216)
Q Consensus 192 -~fg~~i~~~Q~v~---ad~~~~~~~~r 215 (216)
+||+||++||.|| +||.++++++|
T Consensus 275 ~~fg~~i~~~q~v~~~la~~~~~~~aar 302 (385)
T 2pg0_A 275 TAFGKRVSEFQTVQFRLAEMATEIALGR 302 (385)
T ss_dssp EETTEEGGGSHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCccchhHHHHHHHHHHHHHHHHHH
Confidence 4999999999999 99999999876
No 14
>1egd_A Medium chain acyl-COA dehydrogenase; flavoprotein, electron transfer; HET: FAD; 2.40A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1 PDB: 1egc_A* 1ege_A* 1t9g_A* 2a1t_A* 1udy_A* 3mdd_A* 3mde_A*
Probab=99.86 E-value=6.1e-25 Score=177.96 Aligned_cols=197 Identities=22% Similarity=0.351 Sum_probs=150.5
Q ss_pred CccccccCCCCCCCCCCCHHHHHHHHHHHHccCCChhHHHHHHHhhHHHHHHhcCChhHHHHHHHHHHhCCce-eeecCC
Q psy5139 2 TTLLGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEKYLPRLAQTDLM-GVEIPQ 80 (216)
Q Consensus 2 ~G~~~~~~p~~~GG~g~~~~~~~~~~ee~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~l~~g~~~-~~~~~e 80 (216)
.||+++.+|++|||.|+++.+.+.+.||+++.+.+++..+ .|..++...|..+++++|+++|+|++.+|+.+ +++++|
T Consensus 59 ~Gl~~~~~P~~~GG~g~~~~~~~~v~eel~~~~~~~~~~~-~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tE 137 (396)
T 1egd_A 59 LGLMNTHIPENCGGLGLGTFDACLISEELAYGCTGVQTAI-EGNSLGQMPIIIAGNDQQKKKYLGRMTEEPLMCAYCVTE 137 (396)
T ss_dssp HTCSSTTSCGGGTSCCCCHHHHHHHHHHHHHHCHHHHHHH-HHHHHHTHHHHHHCCHHHHHHHHHHHHHSCCCEEEECCB
T ss_pred CCCCCCCCchhhCCCCCCHHHHHHHHHHHHhhCccHHHHH-HhhhHHHHHHHHhCCHHHHHHHHHHHhCCCceEEEEecC
Confidence 4899999999999999999999999999999998887665 44445666688999999999999999999976 689999
Q ss_pred CCCCCCccHH-------------------------HHHHHHHHHHhhCC--------Cc-eeEeeechh-h-hHHHHHhc
Q psy5139 81 EYGGPGLSFM-------------------------TDILIVEEIARVDP--------SV-SILVDIQNT-L-VNDLIIKL 124 (216)
Q Consensus 81 ~~gG~~~~~~-------------------------~~~~v~e~lar~~~--------~~-~~~v~~~~~-~-~~~~~~~~ 124 (216)
|.+|+|...+ .+.+++ +++++. ++ .|+|+.+.+ + +.....++
T Consensus 138 p~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v--~a~~~~~~~~~~~~g~~~flV~~~~pGv~v~~~~~~~ 215 (396)
T 1egd_A 138 PGAGSDVAGIKTKAEKKGDEYIINGQKMWITNGGKANWYFL--LARSDPDPKAPANKAFTGFIVEADTPGIQIGRKELNM 215 (396)
T ss_dssp TTBSSSGGGCCCEEEECSSEEEEEEEEEEEETTTTCSEEEE--EEECCCCTTSCGGGTEEEEEEETTCTTEEECCCCCBS
T ss_pred CCCCcchhhCeeEEEEeCCEEEEEEEEEcccCCcccCEEEE--EEEeCCCCCCCCCCCeEEEEEeCCCCCeeeCCccccc
Confidence 9999885321 123333 566542 23 377776532 2 21334556
Q ss_pred CCH--HHhhhhchhc---ccccccccccchhhhhhhhccccCCceeeccceeeeecCcccCCCcceeeeeec--------
Q psy5139 125 GTT--EQKEKYLPRL---AQTDVSRTSRGYKALEWHAFYGRTDSLPLNDHLSHISSGCVGFDGQLKRWMVSC-------- 191 (216)
Q Consensus 125 g~~--~~~~~~l~~~---~~~~lg~~~~g~~~~~~~~~~~~~~~~~l~g~k~~va~~~~g~~~~~~~~~~~~-------- 191 (216)
|.+ ...+..|+++ .++++|.++.|+......+...| ..+++..+|. ++.+++.
T Consensus 216 G~~~~~~~~v~fd~v~Vp~~~~lg~~~~g~~~~~~~l~~~r----------~~~aa~~~G~----a~~al~~a~~ya~~R 281 (396)
T 1egd_A 216 GQRCSDTRGIVFEDVKVPKENVLIGDGAGFKVAMGAFDKER----------PVVAAGAVGL----AQRALDEATKYALER 281 (396)
T ss_dssp SCTTSCEEEEEEEEEEEEGGGBSSSTTBHHHHHHHHHHHHH----------HHHHHHHHHH----HHHHHHHHHHHHTTC
T ss_pred cccCCCeeEEEECcEEECHHHcCCCCCccHHHHHHHHHHHH----------HHHHHHHHHH----HHHHHHHHHHHHhcC
Confidence 643 3456778775 46788988889888777777777 8888888888 6665543
Q ss_pred -cccceeeeeeccc---ccccccccccC
Q psy5139 192 -GLSLQILQFQNLS---SDMHMTGLASR 215 (216)
Q Consensus 192 -~fg~~i~~~Q~v~---ad~~~~~~~~r 215 (216)
+||+||++||.|| +||+++++++|
T Consensus 282 ~~fG~~i~~~q~vq~~la~~~~~~~aar 309 (396)
T 1egd_A 282 KTFGKLLVEHQAISFMLAEMAMKVELAR 309 (396)
T ss_dssp EETTEEGGGSHHHHHHHHHHHHHHHHHH
T ss_pred ccCCcchhhhHHHHHHHHHHHHHHHHHH
Confidence 4999999999999 99999999876
No 15
>3sf6_A Glutaryl-COA dehydrogenase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; HET: FDA; 1.70A {Mycobacterium smegmatis}
Probab=99.86 E-value=1.1e-24 Score=176.89 Aligned_cols=196 Identities=23% Similarity=0.270 Sum_probs=151.3
Q ss_pred CccccccCCCCCCCCCCCHHHHHHHHHHHHccCCChhHHHHHHHhhHHHHHHhcCChhHHHHHHHHHHhCCce-eeecCC
Q psy5139 2 TTLLGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEKYLPRLAQTDLM-GVEIPQ 80 (216)
Q Consensus 2 ~G~~~~~~p~~~GG~g~~~~~~~~~~ee~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~l~~g~~~-~~~~~e 80 (216)
.||+++.+ ++|||.|+++.+.+.+.||+++.+.+++..+..|..++...|..+++++|+++|++++.+|+.+ +++++|
T Consensus 74 ~Gl~~l~~-~e~GG~g~~~~~~~~v~eela~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tE 152 (403)
T 3sf6_A 74 LGLLGMHL-KGYGCAGMSAVAYGLACLELEAGDSGIRSLVSVQGSLAMYAIHAFGSDEQKDQWLPDMASGHRIGCFGLTE 152 (403)
T ss_dssp TTCSSTTS-CSTTCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHTHHHHHHHHCCHHHHHHHHHHHHTTSSCEEEECCB
T ss_pred CCCCcccc-hhhCCCCCCHHHHHHHHHHHHHhcccHHHHHHHhhhhHHHHHHHhCCHHHHHHHHHHHhCCCceEEEEEcc
Confidence 59999999 9999999999999999999999998877666656556677899999999999999999999976 689999
Q ss_pred CCCCCCccHH-------------------------HHHHHHHHHHhhCCCce-eEeeechh-h-hHHHHHhcCCH--HHh
Q psy5139 81 EYGGPGLSFM-------------------------TDILIVEEIARVDPSVS-ILVDIQNT-L-VNDLIIKLGTT--EQK 130 (216)
Q Consensus 81 ~~gG~~~~~~-------------------------~~~~v~e~lar~~~~~~-~~v~~~~~-~-~~~~~~~~g~~--~~~ 130 (216)
|.+|+|...+ .+.+++ +++++.+++ |+|+.+.+ + +.....++|.+ ...
T Consensus 153 p~~Gsd~~~~~t~A~~~~~g~~lnG~K~~is~a~~Ad~~~v--~ar~~~g~~~flV~~~~pGv~v~~~~~~~G~r~~~~~ 230 (403)
T 3sf6_A 153 PDHGSDPAGMRTRATRSGDDWILTGTKMWITNGSVADVAVV--WARTDEGIRGFVVPTDTPGFTANTIKSKMSLRASVTS 230 (403)
T ss_dssp TTBSSCGGGCCCEEEEETTEEEEEEEEEEEETGGGCSEEEE--EEEETTEEEEEEEETTSTTEEEEECCSCSSCTTSCEE
T ss_pred CCCCCCchhcEEEEEEECCEEEEEEEEEeecCCcccCEEEE--EEEeCCceEEEEEECCCCCeEecCCCCccCCCCCcee
Confidence 9999986421 123333 566655444 67776542 1 12222345533 446
Q ss_pred hhhchhc---ccccccccccchhhhhhhhccccCCceeeccceeeeecCcccCCCcceeeeeec---------cccceee
Q psy5139 131 EKYLPRL---AQTDVSRTSRGYKALEWHAFYGRTDSLPLNDHLSHISSGCVGFDGQLKRWMVSC---------GLSLQIL 198 (216)
Q Consensus 131 ~~~l~~~---~~~~lg~~~~g~~~~~~~~~~~~~~~~~l~g~k~~va~~~~g~~~~~~~~~~~~---------~fg~~i~ 198 (216)
+.+|+++ .++.++. +.|+......+...| ..+++..+|. ++.+++. +||+||+
T Consensus 231 ~v~fd~v~Vp~~~~lg~-~~g~~~~~~~l~~~r----------~~~aa~~~G~----a~~al~~a~~ya~~R~~fg~pi~ 295 (403)
T 3sf6_A 231 ELVLDGVRLPDSARLPG-ATSLGAPLRCLNEAR----------FGIVFGALGA----ARDCLETALAYACSREQFDRPIG 295 (403)
T ss_dssp EEEEEEEEEEGGGBCTT-CCSTHHHHHHHHHHH----------HHHHHHHHHH----HHHHHHHHHHHHHHCEETTEEGG
T ss_pred EEEEccEEEcHHHccCC-ChhHHHHHHHHHHHH----------HHHHHHHHHH----HHHHHHHHHHHHhhCcccCCcch
Confidence 6778874 4677877 788888777777777 8888888888 6666543 4999999
Q ss_pred eeeccc---ccccccccccC
Q psy5139 199 QFQNLS---SDMHMTGLASR 215 (216)
Q Consensus 199 ~~Q~v~---ad~~~~~~~~r 215 (216)
+||.|| +||+++++++|
T Consensus 296 ~~q~vq~~la~~~~~~~aar 315 (403)
T 3sf6_A 296 GFQLTQQKLADMTLEYGKGF 315 (403)
T ss_dssp GSHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHH
Confidence 999999 99999999886
No 16
>2vig_A Short-chain specific acyl-COA dehydrogenase,; fatty acid metabolism, FAD, polymorphism, flavoprotein, mitochondrion, disease mutation; HET: FAD COS; 1.9A {Homo sapiens} PDB: 1jqi_A*
Probab=99.86 E-value=3.6e-25 Score=179.02 Aligned_cols=198 Identities=23% Similarity=0.389 Sum_probs=152.2
Q ss_pred CccccccCCCCCCCCCCCHHHHHHHHHHHHccCCChhHHHHHHHhhHHHHHHhcCChhHHHHHHHHHHhCCce-eeecCC
Q psy5139 2 TTLLGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEKYLPRLAQTDLM-GVEIPQ 80 (216)
Q Consensus 2 ~G~~~~~~p~~~GG~g~~~~~~~~~~ee~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~l~~g~~~-~~~~~e 80 (216)
.||+++.+|++|||.|+++.+.+.+.||+++.+.+++..+..|..++...|..+++++|+++|++++.+++.+ +++++|
T Consensus 49 ~Gl~~~~~P~~~GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tE 128 (391)
T 2vig_A 49 LGLLAMDVPEELGGAGLDYLAYAIAMEEISRGCASTGVIMSVNNSLYLGPILKFGSKEQKQAWVTPFTSGDKIGCFALSE 128 (391)
T ss_dssp HTTTSTTSCGGGTSCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHTTHHHHHHHCCHHHHHHHTGGGSSSSCCEEEECCB
T ss_pred CCCCCCCCCHhhCCCCCCHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhCCCceEEEEecC
Confidence 4899999999999999999999999999999998877666655335677789999999999999999999975 789999
Q ss_pred CCCCCCccHH-------------------------HHHHHHHHHHhhCC-----Cc-eeEeeechh-h-hHHHHHhcCCH
Q psy5139 81 EYGGPGLSFM-------------------------TDILIVEEIARVDP-----SV-SILVDIQNT-L-VNDLIIKLGTT 127 (216)
Q Consensus 81 ~~gG~~~~~~-------------------------~~~~v~e~lar~~~-----~~-~~~v~~~~~-~-~~~~~~~~g~~ 127 (216)
|.+|+|.... .+.+++ +++++. ++ .|+|+.+.+ + +.....++|.+
T Consensus 129 p~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v--~a~~~~~~~~~g~~~flV~~~~pGv~v~~~~~~~g~r 206 (391)
T 2vig_A 129 PGNGSDAGAASTTARAEGDSWVLNGTKAWITNAWEASAAVV--FASTDRALQNKSISAFLVPMPTPGLTLGKKEDKLGIR 206 (391)
T ss_dssp TTBSSSGGGCCCEEEEETTEEEEEEEEEEEETTTTCSEEEE--EEECCSSSTTSCEEEEEEESSCTTEEECCCCCBSSCT
T ss_pred CCCCCCcccceeEEEEeCCEEEEeeEEEeecCCCcCCEEEE--EEEeCCCCCCCceEEEEEeCCCCCeEecCccccccCC
Confidence 9999876421 133344 566542 23 377876542 2 22333456643
Q ss_pred --HHhhhhchhc---ccccccccccchhhhhhhhccccCCceeeccceeeeecCcccCCCcceeeeeec---------cc
Q psy5139 128 --EQKEKYLPRL---AQTDVSRTSRGYKALEWHAFYGRTDSLPLNDHLSHISSGCVGFDGQLKRWMVSC---------GL 193 (216)
Q Consensus 128 --~~~~~~l~~~---~~~~lg~~~~g~~~~~~~~~~~~~~~~~l~g~k~~va~~~~g~~~~~~~~~~~~---------~f 193 (216)
...+.+|+++ .+++++.++.|++.....+...| ..+++..+|. ++.+++. +|
T Consensus 207 ~~~~~~v~fd~v~Vp~~~~lg~~g~g~~~~~~~l~~~r----------~~~aa~~~G~----a~~al~~a~~ya~~R~~f 272 (391)
T 2vig_A 207 GSSTANLIFEDCRIPKDSILGEPGMGFKIAMQTLDMGR----------IGIASQALGI----AQTALDCAVNYAENRMAF 272 (391)
T ss_dssp TSCEEEEEEEEEEEEGGGEESSTTBHHHHHHHHHHHHH----------HHHHHHHHHH----HHHHHHHHHHHHHHCEET
T ss_pred CCCeeEEEECcEEECHHHcCCCCCchHHHHHHHHHHHH----------HHHHHHHHHH----HHHHHHHHHHHHHhCccC
Confidence 4566778875 46788988889887777777776 8888888888 6666543 49
Q ss_pred cceeeeeeccc---ccccccccccC
Q psy5139 194 SLQILQFQNLS---SDMHMTGLASR 215 (216)
Q Consensus 194 g~~i~~~Q~v~---ad~~~~~~~~r 215 (216)
|+||++||.|| +||+++++++|
T Consensus 273 g~~i~~~q~v~~~la~~~~~~~aar 297 (391)
T 2vig_A 273 GAPLTKLQVIQFKLADMALALESAR 297 (391)
T ss_dssp TEEGGGSHHHHHHHHHHHHHHHHHH
T ss_pred CCcchhhHHHHHHHHHHHHHHHHHH
Confidence 99999999999 99999999876
No 17
>2eba_A Putative glutaryl-COA dehydrogenase; thermus thermophilius, FAD, STRU genomics, NPPSFA; HET: FAD; 2.21A {Thermus thermophilus}
Probab=99.85 E-value=1.1e-24 Score=175.91 Aligned_cols=197 Identities=24% Similarity=0.316 Sum_probs=145.8
Q ss_pred CccccccCCCCCCCCCCCHHHHHHHHHHHHccCCChhHHHHHHHhhHHHHHHhcCChhHHHHHHHHHHhCCce-eeecCC
Q psy5139 2 TTLLGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEKYLPRLAQTDLM-GVEIPQ 80 (216)
Q Consensus 2 ~G~~~~~~p~~~GG~g~~~~~~~~~~ee~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~l~~g~~~-~~~~~e 80 (216)
.||+++.+|++|||.|+++.+.+.+.||+++.+.+++..+..|..++...|..+++++|+++|+|++.+|+++ +++++|
T Consensus 54 ~Gl~~~~~P~~~GG~g~~~~~~~~v~eela~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tE 133 (385)
T 2eba_A 54 LGFLGPTLPPEYGGAGVSSAAYGLICYELERVDSGLRSFVSVQSSLVMYPIYAYGSEEQKREFLPKLARGEMVGCFGLTE 133 (385)
T ss_dssp HTCSSTTSCGGGTCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHTTHHHHHHHSCHHHHHHHHHHHHTTSSCEEEECCC
T ss_pred CCCcCCCCchhhCCCCCCHHHHHHHHHHHHHhCchHHHHHHHHHhHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEeCC
Confidence 4899999999999999999999999999999999888766665556667788999999999999999999975 689999
Q ss_pred CCCCCCc-cHH-------------------------HHHHHHHHHHhhCCC-c-eeEeeechh-h-hHHHHHhcCCH--H
Q psy5139 81 EYGGPGL-SFM-------------------------TDILIVEEIARVDPS-V-SILVDIQNT-L-VNDLIIKLGTT--E 128 (216)
Q Consensus 81 ~~gG~~~-~~~-------------------------~~~~v~e~lar~~~~-~-~~~v~~~~~-~-~~~~~~~~g~~--~ 128 (216)
|.+|+|. ..+ .+.+++ +++++.+ + .|+|+.+.+ + +.....++|.+ .
T Consensus 134 p~~Gsd~~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v--~a~~~~g~~~~flV~~~~pGv~v~~~~~~~G~~~~~ 211 (385)
T 2eba_A 134 PDGGSDPYGNMKTRARREGDTWVLNGTKMWITNGNLAHLAVI--WAKDEGGEVLGFLVPTDTPGFQAREVKRKMSLRASV 211 (385)
T ss_dssp TTCTTSTTTTCCCEEEC--CEEEEEEEEEEEETTTTCSEEEE--EEECC---EEEEEEETTSTTEEEEECCSBSSSCSSC
T ss_pred CCcCCCccccCeeEEEEeCCEEEEEeeeeccCCCcccCEEEE--EEEeCCCcEEEEEEeCCCCCeEecccccccccccCc
Confidence 9999887 211 122333 4554322 3 366766532 1 11112234433 3
Q ss_pred Hhhhhchhc---ccccccccccchhhhhhhhccccCCceeeccceeeeecCcccCCCcceeeeeec---------cccce
Q psy5139 129 QKEKYLPRL---AQTDVSRTSRGYKALEWHAFYGRTDSLPLNDHLSHISSGCVGFDGQLKRWMVSC---------GLSLQ 196 (216)
Q Consensus 129 ~~~~~l~~~---~~~~lg~~~~g~~~~~~~~~~~~~~~~~l~g~k~~va~~~~g~~~~~~~~~~~~---------~fg~~ 196 (216)
..+..|+++ .++.+ .++.|++.....+...| ..+++..+|. ++.+++. +||+|
T Consensus 212 ~~~v~f~~v~Vp~~~~l-~~~~g~~~~~~~l~~~r----------~~~aa~~~G~----a~~al~~a~~ya~~R~~fg~~ 276 (385)
T 2eba_A 212 TSELVLEEVRVPESLRL-PKALGLKAPLSCLTQAR----------FGIAWGAMGA----LEAVYEEAVAFAKSRSTFGEP 276 (385)
T ss_dssp EEEEEEEEEEEEGGGBC-TTCCSTHHHHHHHHHHH----------HHHHHHHHHH----HHHHHHHHHHHHHHCBSSSSB
T ss_pred eeEEEEccEEEcHHHcc-CCCchHHHHHHHHHHHH----------HHHHHHHHHH----HHHHHHHHHHHHhhCeeCCee
Confidence 456677764 35667 66778877666666666 8888888888 6655543 49999
Q ss_pred eeeeeccc---ccccccccccC
Q psy5139 197 ILQFQNLS---SDMHMTGLASR 215 (216)
Q Consensus 197 i~~~Q~v~---ad~~~~~~~~r 215 (216)
|++||.|| +||.++++++|
T Consensus 277 i~~~q~vq~~la~~~~~~~aar 298 (385)
T 2eba_A 277 LAKKQLVQAKLAEMLAWHTEGL 298 (385)
T ss_dssp GGGSHHHHHHHHHHHHHHHHHH
T ss_pred HHhCHHHHHHHHHHHHHHHHHH
Confidence 99999999 99999998876
No 18
>3swo_A Glutaryl-COA dehydrogenase; ssgcid, glutaryl-COA dehdrogenase, mycobacerium smegmatis, S genomics; HET: FDA; 1.45A {Mycobacterium smegmatis}
Probab=99.85 E-value=1.8e-24 Score=175.36 Aligned_cols=196 Identities=23% Similarity=0.268 Sum_probs=150.8
Q ss_pred CccccccCCCCCCCCCCCHHHHHHHHHHHHccCCChhHHHHHHHhhHHHHHHhcCChhHHHHHHHHHHhCCce-eeecCC
Q psy5139 2 TTLLGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEKYLPRLAQTDLM-GVEIPQ 80 (216)
Q Consensus 2 ~G~~~~~~p~~~GG~g~~~~~~~~~~ee~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~l~~g~~~-~~~~~e 80 (216)
.||+++.+ ++|||.|+++.+.+.+.||+++.+.+++..+..|..++...|..+++++|+++|++++.+|+.+ +++++|
T Consensus 69 ~Gl~~l~~-~e~GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tE 147 (399)
T 3swo_A 69 LGVLGMHL-QGYGCAGTNAVSYGLACMELEAGDSGFRSFVSVQGSLSMFSIYRYGSEEQKNEWLPRLAAGDAIGCFGLTE 147 (399)
T ss_dssp HTCTTTTS-CSTTCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHTTTHHHHHHHHCCHHHHHHHHHHHHHTSSCEEEECCB
T ss_pred CCCCcCCh-hhhCCCCCCHHHHHHHHHHHHHhCccHHHHHHHHhhhhhhHHHhcCCHHHHHHHHHHHhCCCeeeEEEecC
Confidence 49999999 9999999999999999999999998877666655556677899999999999999999999976 679999
Q ss_pred CCCCCCccHH-------------------------HHHHHHHHHHhhCCCce-eEeeechh-h-hHHHHHhcCCH--HHh
Q psy5139 81 EYGGPGLSFM-------------------------TDILIVEEIARVDPSVS-ILVDIQNT-L-VNDLIIKLGTT--EQK 130 (216)
Q Consensus 81 ~~gG~~~~~~-------------------------~~~~v~e~lar~~~~~~-~~v~~~~~-~-~~~~~~~~g~~--~~~ 130 (216)
|.+|+|...+ .+.+++ +++++.+++ |+|+.+.+ + +.....++|.+ ...
T Consensus 148 p~~Gsd~~~~~t~A~~~~~g~~lnG~K~~vs~a~~Ad~~~v--~a~~~~g~~~flV~~~~pGv~v~~~~~~~G~r~~~~~ 225 (399)
T 3swo_A 148 PDFGSNPAGMRTRARRDGSDWILNGTKMWITNGNLADVATV--WAQTDDGIRGFLVPTDTPGFTANEIHRKLSLRASVTS 225 (399)
T ss_dssp TTBSSCGGGCCCEEEEETTEEEEEEEEEEEETTTTCSEEEE--EEBCTTSCEEEEEETTSTTEEEEECCCBSSCCSSCEE
T ss_pred CCCCCCCccceEEEEEeCCEEEEEEEEEeECCCCccCEEEE--EEEeCCceEEEEEeCCCCCeEeecCcCcccCCCCcee
Confidence 9999886421 133334 566654444 67776542 1 21222345532 456
Q ss_pred hhhchhc---ccccccccccchhhhhhhhccccCCceeeccceeeeecCcccCCCcceeeeeec---------cccceee
Q psy5139 131 EKYLPRL---AQTDVSRTSRGYKALEWHAFYGRTDSLPLNDHLSHISSGCVGFDGQLKRWMVSC---------GLSLQIL 198 (216)
Q Consensus 131 ~~~l~~~---~~~~lg~~~~g~~~~~~~~~~~~~~~~~l~g~k~~va~~~~g~~~~~~~~~~~~---------~fg~~i~ 198 (216)
+.+|+++ .++.++. +.|++.....+...| ..+++..+|. ++.+++. +||+||+
T Consensus 226 ~v~fd~v~Vp~~~~lg~-~~g~~~~~~~l~~~r----------~~~aa~~~G~----a~~al~~a~~~a~~R~~fG~~i~ 290 (399)
T 3swo_A 226 ELVLDNVRLPASAQLPL-AEGLSAPLSCLNEAR----------FGIVFGALGA----ARDSLETTIAYTQSREVFDKPLS 290 (399)
T ss_dssp EEEEEEEEECGGGBCTT-CCSTHHHHHHHHHHH----------HHHHHHHHHH----HHHHHHHHHHHHHHCEETTEEGG
T ss_pred EEEEccEEEcHHHcCCC-ChhHHHHHHHHHHHH----------HHHHHHHHHH----HHHHHHHHHHHHhcCeeCCcchh
Confidence 6778874 4677887 888888777777777 8888888988 6666543 4999999
Q ss_pred eeeccc---ccccccccccC
Q psy5139 199 QFQNLS---SDMHMTGLASR 215 (216)
Q Consensus 199 ~~Q~v~---ad~~~~~~~~r 215 (216)
+||.|| +||+++++++|
T Consensus 291 ~~q~vq~~la~~~~~~~aar 310 (399)
T 3swo_A 291 NYQLTQEKLANMTVELGKGM 310 (399)
T ss_dssp GSHHHHHHHHHHHHHHHHHH
T ss_pred hCHHHHHHHHHHHHHHHHHH
Confidence 999999 99999999886
No 19
>2z1q_A Acyl-COA dehydrogenase; FAD, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: FAD; 2.30A {Thermus thermophilus}
Probab=99.85 E-value=2e-24 Score=182.15 Aligned_cols=197 Identities=22% Similarity=0.337 Sum_probs=148.8
Q ss_pred CccccccCCCCCCCCCCCHHHHHHHHHHHHccCCChhHHHHHHHhhHHHHHHhcCChhHHHHHHHHHHhCCce-eeecCC
Q psy5139 2 TTLLGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEKYLPRLAQTDLM-GVEIPQ 80 (216)
Q Consensus 2 ~G~~~~~~p~~~GG~g~~~~~~~~~~ee~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~l~~g~~~-~~~~~e 80 (216)
.||+++.+|++|||.|++..+...+.|++ +.+.+.+..+..|..++...|..+|+++|+++|+|++.+|+++ +++++|
T Consensus 72 ~Gl~~l~vPee~GG~g~~~~~~~~v~eel-~~~~s~~~~~~~~~~~~~~~l~~~Gt~eQk~~~Lp~l~~G~~~~a~alTE 150 (577)
T 2z1q_A 72 LGLLAIDVPEEYGGLDLPKVISTVVAEEL-SGSGGFSVTYGAHTSIGTLPLVYFGTEEQKRKYLPKLASGEWIAAYCLTE 150 (577)
T ss_dssp TTTTSTTSCGGGTCCCCCHHHHHHHHHHH-TTSCTHHHHHHHHHTTTTHHHHHHCCHHHHHTTHHHHHHTSSCEEEECCB
T ss_pred CCCCCcCCChhhCCCCCCHHHHHHHHHHH-hhcccHHHHHhhhHHHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEecC
Confidence 59999999999999999999999999999 6777776666656545566789999999999999999999976 689999
Q ss_pred CCCCCCccHH---------------------------HHHHHHHHHHhhCC-Cc-eeEeeechh-h-hHHHHHhcCCH--
Q psy5139 81 EYGGPGLSFM---------------------------TDILIVEEIARVDP-SV-SILVDIQNT-L-VNDLIIKLGTT-- 127 (216)
Q Consensus 81 ~~gG~~~~~~---------------------------~~~~v~e~lar~~~-~~-~~~v~~~~~-~-~~~~~~~~g~~-- 127 (216)
|.+|+|+..+ .+.+++ ++|+++ ++ .|+|+.+.+ + +.....++|.+
T Consensus 151 p~aGSD~~~~~t~A~~~~dG~~~vLnG~K~~it~a~~Ad~~~V--~Ar~~g~gis~flVp~~~pGv~v~~~~~~~G~~~~ 228 (577)
T 2z1q_A 151 PGSGSDALAAKTRATLSEDGKHYILNGVKQWISNAGFAHLFTV--FAKVDGEHFTAFLVERDTPGLSFGPEEKKMGIKAS 228 (577)
T ss_dssp TTBSSSGGGCCCEEEECTTSSEEEEEEEEEEEETTTTCSEEEE--EEEETTTEEEEEEEETTCTTEEECCCCCBSSCTTS
T ss_pred CCCCCCcccCeeEEEEeCCCCEEEEEEEeeCCCCCCccCEEEE--EEEeCCCeeEEEEEeCCCCCeEecCCCCCCCCCCC
Confidence 9999875321 122233 555542 23 367776532 2 22222445643
Q ss_pred HHhhhhchhc---ccccccccccchhhhhhhhccccCCceeeccceeeeecCcccCCCcceeeeee---------ccccc
Q psy5139 128 EQKEKYLPRL---AQTDVSRTSRGYKALEWHAFYGRTDSLPLNDHLSHISSGCVGFDGQLKRWMVS---------CGLSL 195 (216)
Q Consensus 128 ~~~~~~l~~~---~~~~lg~~~~g~~~~~~~~~~~~~~~~~l~g~k~~va~~~~g~~~~~~~~~~~---------~~fg~ 195 (216)
...+.+|+++ .++++|.++.|++.....++..| ..+++..+|. ++.+++ .+||+
T Consensus 229 ~~~~v~fddv~VP~~~llg~~g~g~~~~~~~l~~~R----------~~~aa~~~G~----a~~al~~a~~ya~~R~qfg~ 294 (577)
T 2z1q_A 229 STRQVILEDVKVPVENVLGEIGKGHKIAFNVLNVGR----------YKLGAGAVGG----AKRALELSAQYATQRVQFGR 294 (577)
T ss_dssp CEEEEEEEEEEEEGGGEESCTTCTHHHHHHHHHHHH----------HHHHHHHHHH----HHHHHHHHHHHHHHCBCSSS
T ss_pred ceeEEEecceeccHHHccCCCCchHHHHHHHHHHHH----------HHHHHHHHHH----HHHHHHHHHHHHHhCccCCC
Confidence 3456677764 46889999999988877777777 8888888888 555553 35999
Q ss_pred eeeeeeccc---ccccccccccC
Q psy5139 196 QILQFQNLS---SDMHMTGLASR 215 (216)
Q Consensus 196 ~i~~~Q~v~---ad~~~~~~~~r 215 (216)
||++||.|| +||.+.++++|
T Consensus 295 pi~~~q~vq~~La~~~~~~~aar 317 (577)
T 2z1q_A 295 PIGRFGLIQQKLGEMASRIYAAE 317 (577)
T ss_dssp BGGGSHHHHHHHHHHHHHHHHHH
T ss_pred chhhhHHHHHHHHHHHHHHHHHH
Confidence 999999999 99999988876
No 20
>1buc_A Butyryl-COA dehydrogenase; acyl-COA dehydrogenase short-chain acyl-COA dehydrogenase, flavoprotein, oxidoreductase; HET: CAA FAD; 2.50A {Megasphaera elsdenii} SCOP: a.29.3.1 e.6.1.1
Probab=99.85 E-value=1.2e-24 Score=175.64 Aligned_cols=198 Identities=25% Similarity=0.365 Sum_probs=149.7
Q ss_pred CccccccCCCCCCCCC---CCHHHHHHHHHHHHccCCChhHHHHHHHhhHHHHHHhcCChhHHHHHHHHHHhCCce-eee
Q psy5139 2 TTLLGVEIPQEYGGPG---LSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEKYLPRLAQTDLM-GVE 77 (216)
Q Consensus 2 ~G~~~~~~p~~~GG~g---~~~~~~~~~~ee~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~l~~g~~~-~~~ 77 (216)
.||+++.+|++|||.| +++.+...+.||+++.+.+++..+..|..++...|..+++++|+++|++++.+++.+ +++
T Consensus 48 ~Gl~~~~~P~~~GG~g~~~~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a 127 (383)
T 1buc_A 48 LGITGAYFEEKYGGSGDDGGDVLSYILAVEELAKYDAGVAITLSATVSLCANPIWQFGTEAQKEKFLVPLVEGTKLGAFG 127 (383)
T ss_dssp TSGGGTTSCGGGTCGGGGTCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHTHHHHHHHCCHHHHHHTHHHHHHTSSCEEEE
T ss_pred CCCCCCCCChhhCCCCCCCCCHHHHHHHHHHHHhhChHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHhCCCeeEEEE
Confidence 6999999999999999 999999999999999998887766655446677889999999999999999999975 789
Q ss_pred cCCCCCCCCccHH--------------------------HHHHHHHHHHhhCC-----Cce-eEeeechh-h-hHHHHHh
Q psy5139 78 IPQEYGGPGLSFM--------------------------TDILIVEEIARVDP-----SVS-ILVDIQNT-L-VNDLIIK 123 (216)
Q Consensus 78 ~~e~~gG~~~~~~--------------------------~~~~v~e~lar~~~-----~~~-~~v~~~~~-~-~~~~~~~ 123 (216)
++||.+|+|...+ .+.+++ +++++. +++ |+|+.+.+ + +.....+
T Consensus 128 ~tEp~~Gsd~~~~~t~A~~~~~~g~~lnG~K~~~s~~~~Ad~~~v--~a~~~~~~~~~g~~~flV~~~~~Gv~v~~~~~~ 205 (383)
T 1buc_A 128 LTEPNAGTDASGQQTIATKNDDGTYTLNGSKIFITNGGAADIYIV--FAMTDKSKGNHGITAFILEDGTPGFTYGKKEDK 205 (383)
T ss_dssp CCBTTBSSCGGGCCCEEEECTTSCEEEEEEEEEEETTTTCSEEEE--EEESCSSSSTTSEEEEEEETTCTTEEEEEECCC
T ss_pred eCCCCCCCChhhCEeEEEEcCCCEEEEEEEEeccCCCCcCCEEEE--EEEeCCCCCCCceEEEEEECCCCCeEecCcccc
Confidence 9999888875211 122333 555542 233 67776432 2 1122344
Q ss_pred cCCH--HHhhhhchhc---ccccccccccchhhhhhhhccccCCceeeccceeeeecCcccCCCcceeeeeec-------
Q psy5139 124 LGTT--EQKEKYLPRL---AQTDVSRTSRGYKALEWHAFYGRTDSLPLNDHLSHISSGCVGFDGQLKRWMVSC------- 191 (216)
Q Consensus 124 ~g~~--~~~~~~l~~~---~~~~lg~~~~g~~~~~~~~~~~~~~~~~l~g~k~~va~~~~g~~~~~~~~~~~~------- 191 (216)
+|.+ ...+.+|+++ .+++++.++.|++.....+...| ..+++..+|. ++.+++.
T Consensus 206 ~g~~~~~~~~v~f~~v~Vp~~~~lg~~g~g~~~~~~~l~~~r----------~~~aa~~~G~----a~~al~~~~~ya~~ 271 (383)
T 1buc_A 206 MGIHTSQTMELVFQDVKVPAENMLGEEGKGFKIAMMTLDGGR----------IGVAAQALGI----AEAALADAVEYSKQ 271 (383)
T ss_dssp SSCTTSCEEEEEEEEEEECGGGEESCTTBHHHHHHHHHHHHH----------HHHHHHHHHH----HHHHHHHHHHHHHH
T ss_pred ccccCCceeEEEEccEEeCHHHcCCCCCchHHHHHHHHHHHH----------HHHHHHHHHH----HHHHHHHHHHHHHh
Confidence 5543 3456677775 46788888888887777666666 8888888888 6666543
Q ss_pred --cccceeeeeeccc---ccccccccccC
Q psy5139 192 --GLSLQILQFQNLS---SDMHMTGLASR 215 (216)
Q Consensus 192 --~fg~~i~~~Q~v~---ad~~~~~~~~r 215 (216)
+||+||++||.|| +||.++++++|
T Consensus 272 R~~fG~~i~~~q~vq~~la~~~~~~~~ar 300 (383)
T 1buc_A 272 RVQFGKPLCKFQSISFKLADMKMQIEAAR 300 (383)
T ss_dssp CEETTEEGGGSHHHHHHHHHHHHHHHHHH
T ss_pred CeeCCcchhhhHHHHHHHHHHHHHHHHHH
Confidence 4999999999999 99999998876
No 21
>2ix5_A Acyl-coenzyme A oxidase 4, peroxisomal; FAD, ACX4, flavin, peroxisome, glyoxysome, fatty acid metabo lipid metabolism, acyl-COA oxidase; HET: CAA FAD; 2.7A {Arabidopsis thaliana} PDB: 2ix6_A*
Probab=99.85 E-value=3.4e-24 Score=175.30 Aligned_cols=196 Identities=24% Similarity=0.309 Sum_probs=147.4
Q ss_pred CccccccCCCCCCCCCCCHHHHHHHHHHHHccCCChhHHHHHHHhhHHHHHHhcCChhHHHHHHHHHHhCCce-eeecCC
Q psy5139 2 TTLLGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEKYLPRLAQTDLM-GVEIPQ 80 (216)
Q Consensus 2 ~G~~~~~~p~~~GG~g~~~~~~~~~~ee~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~l~~g~~~-~~~~~e 80 (216)
+||+++.+| +|||.|++..+...+.||+++.+.+.+..+..|..++...|..+|+++|+++|++++.+|+.+ +++++|
T Consensus 98 ~Gl~~l~~p-e~GG~G~~~~~~~~v~eela~~~~~~~~~~~~~~~~~~~~l~~~gt~~qk~~~l~~l~~G~~~~a~a~tE 176 (436)
T 2ix5_A 98 MGVAGGSIK-GYGCPGLSITANAIATAEIARVDASCSTFILVHSSLGMLTIALCGSEAQKEKYLPSLAQLNTVACWALTE 176 (436)
T ss_dssp TTCTTTTCC-STTCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHTTHHHHHHHHSCHHHHHHHHHHHHTTSSCEEEECCB
T ss_pred cCCCcCcCC-CCCCCCCCHHHHHHHHHHHHhhCccHHHHHHhHHHHHHHHHHHhCCHHHHHHHHHHHhCCCeeeEEEecC
Confidence 699999999 999999999999999999999998887666555556777889999999999999999999976 689999
Q ss_pred CCCCCCccHH-------------------------HHHHHHHHHHhhCC--Cce-eEeeechh-h-hHHHHHhcCCH--H
Q psy5139 81 EYGGPGLSFM-------------------------TDILIVEEIARVDP--SVS-ILVDIQNT-L-VNDLIIKLGTT--E 128 (216)
Q Consensus 81 ~~gG~~~~~~-------------------------~~~~v~e~lar~~~--~~~-~~v~~~~~-~-~~~~~~~~g~~--~ 128 (216)
|.+|+|...+ .+++++ ++|++. .++ |+|+.+.+ + +.....++|.+ .
T Consensus 177 p~~GSd~~~~~t~A~~~gdg~vLnG~K~~is~a~~Ad~~lv--~Ar~~~~~~~~~flV~~~~pGv~v~~~~~~~G~r~~~ 254 (436)
T 2ix5_A 177 PDNGSDASGLGTTATKVEGGWKINGQKRWIGNSTFADLLII--FARNTTTNQINGFIVKKDAPGLKATKIPNKIGLRMVQ 254 (436)
T ss_dssp TTBSSCGGGCCCEEEEETTEEEEEEEEEEEETTTTCSEEEE--EEEETTTSSEEEEEEETTCTTEEEEECCCBSSSTTSC
T ss_pred CCCCCCcccceEEEEEeCCEEEEeeeccCCCCCcccCEEEE--EEEECCCCcEEEEEEECCCCCeEeeccccccCCCcCC
Confidence 9999886421 123333 555542 333 77776532 2 21222345544 3
Q ss_pred Hhhhhchhc---ccccccccccchhhhhhhhccccCCceeeccceeeeecCcccCCCcceeeeeec---------cccce
Q psy5139 129 QKEKYLPRL---AQTDVSRTSRGYKALEWHAFYGRTDSLPLNDHLSHISSGCVGFDGQLKRWMVSC---------GLSLQ 196 (216)
Q Consensus 129 ~~~~~l~~~---~~~~lg~~~~g~~~~~~~~~~~~~~~~~l~g~k~~va~~~~g~~~~~~~~~~~~---------~fg~~ 196 (216)
..+.+|+++ .+++++.. .|+......+...| ..+++..+|. ++.+++. +||+|
T Consensus 255 ~~~v~fddv~VP~~~~lg~~-~g~~~~~~~l~~~r----------~~~aa~~~G~----a~~al~~a~~ya~~R~qfG~p 319 (436)
T 2ix5_A 255 NGDILLQNVFVPDEDRLPGV-NSFQDTSKVLAVSR----------VMVAWQPIGI----SMGIYDMCHRYLKERKQFGAP 319 (436)
T ss_dssp EEEEEEEEEEEEGGGBCTTC-SSHHHHHHHHHHHH----------HHHHHHHHHH----HHHHHHHHHHHHHHCEETTEE
T ss_pred ceeEEeccEEECHHHcCCcc-ccHHHHHHHHHHHH----------HHHHHHHHHH----HHHHHHHHHHHHHhCeeCCcc
Confidence 456778875 45677754 56777666667776 8888888888 6665543 49999
Q ss_pred eeeeeccc---ccccccccccC
Q psy5139 197 ILQFQNLS---SDMHMTGLASR 215 (216)
Q Consensus 197 i~~~Q~v~---ad~~~~~~~~r 215 (216)
|++||.|| +||.++++++|
T Consensus 320 i~~~q~vq~~la~~~~~~~aar 341 (436)
T 2ix5_A 320 LAAFQLNQQKLVQMLGNVQAMF 341 (436)
T ss_dssp GGGSHHHHHHHHHHHHHHHHHH
T ss_pred hhhcHHHHHHHHHHHHHHHHHH
Confidence 99999999 99999999886
No 22
>2uxw_A VERY-long-chain specific acyl-COA dehydrogenase; fatty acid metabolism, transit peptide, disease mutation, LI metabolism, coenzyme A dehydrogenase; HET: FAD TH3; 1.45A {Homo sapiens} PDB: 3b96_A*
Probab=99.84 E-value=1.9e-24 Score=182.93 Aligned_cols=198 Identities=22% Similarity=0.331 Sum_probs=150.1
Q ss_pred CccccccCCCCCCCCCCCHHHHHHHHHHHHccCCChhHHHHHHHhhHHHHHHhcCChhHHHHHHHHHHhCCce-eeecCC
Q psy5139 2 TTLLGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEKYLPRLAQTDLM-GVEIPQ 80 (216)
Q Consensus 2 ~G~~~~~~p~~~GG~g~~~~~~~~~~ee~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~l~~g~~~-~~~~~e 80 (216)
.||+++.+|++|||.|++..+...+.|++++.+.+++..+..|..++...|..+|+++|+++|+|++.+|+++ +++++|
T Consensus 91 ~Gl~~l~~P~e~GG~gl~~~~~~~v~e~l~~~~~s~a~~~~~~~~~g~~~l~~~Gt~eqk~~~Lp~l~~G~~~~~~alTE 170 (607)
T 2uxw_A 91 LGAFGLQVPSELGGVGLCNTQYARLVEIVGMHDLGVGITLGAHQSIGFKGILLFGTKAQKEKYLPKLASGETVAAFCLTE 170 (607)
T ss_dssp TTTTCTTSCGGGTSCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHTTTTHHHHHHCCHHHHHHHHHHHHTTSSCEEEECCB
T ss_pred cCCcCCCCChhhCCCCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEecC
Confidence 5999999999999999999999999999999888877666555444467788999999999999999999975 789999
Q ss_pred CCCCCCccHH---------------------------HHHHHHHHHHhhC----------CCce-eEeeechh-h-hHHH
Q psy5139 81 EYGGPGLSFM---------------------------TDILIVEEIARVD----------PSVS-ILVDIQNT-L-VNDL 120 (216)
Q Consensus 81 ~~gG~~~~~~---------------------------~~~~v~e~lar~~----------~~~~-~~v~~~~~-~-~~~~ 120 (216)
|.+|+|+..+ .+.+++ +++++ .+++ |+|+.+.+ + +...
T Consensus 171 p~aGSD~~~~~t~A~~~~dG~~y~LnG~K~~is~~~~Ad~~lV--~Ar~~~~~~~~g~~~~gis~flVp~~~~Gv~v~~~ 248 (607)
T 2uxw_A 171 PSSGSDAASIRTSAVPSPCGKYYTLNGSKLWISNGGLADIFTV--FAKTPVTDPATGAVKEKITAFVVERGFGGITHGPP 248 (607)
T ss_dssp TTBSSCGGGCCCEEEECTTSSEEEEEEEEEEEETTTTCSEEEE--EEEEEEECTTTCCEEEEEEEEEEEGGGSSEEECCC
T ss_pred CCCCCCcccceeEEEEeCCCCEEEEEeEEEeecCCcccCEEEE--EEEecCCCcccCCCCCceEEEEEeCCCCCeEEecC
Confidence 9999985311 122233 55542 1123 67776532 2 2222
Q ss_pred HHhcCCH--HHhhhhchhc---ccccccccccchhhhhhhhccccCCceeeccceeeeecCcccCCCcceeeeeec----
Q psy5139 121 IIKLGTT--EQKEKYLPRL---AQTDVSRTSRGYKALEWHAFYGRTDSLPLNDHLSHISSGCVGFDGQLKRWMVSC---- 191 (216)
Q Consensus 121 ~~~~g~~--~~~~~~l~~~---~~~~lg~~~~g~~~~~~~~~~~~~~~~~l~g~k~~va~~~~g~~~~~~~~~~~~---- 191 (216)
..++|.+ ...+..|+++ .++++|+++.|++.+...++..| +.+++..+|. ++.+++.
T Consensus 249 ~~~~G~rg~~t~~v~fddv~VP~~~llG~~g~G~~~~~~~l~~~R----------l~~aa~~~G~----a~~al~~a~~y 314 (607)
T 2uxw_A 249 EKKMGIKASNTAEVFFDGVRVPSENVLGEVGSGFKVAMHILNNGR----------FGMAAALAGT----MRGIIAKAVDH 314 (607)
T ss_dssp CCCSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHHHHHHH----------HHHHHHHHHH----HHHHHHHHHHH
T ss_pred ccccCCCCCCeeEEEeccEEecHHHhcCCCCchHHHHHHHHHHHH----------HHHHHHHHHH----HHHHHHHHHHH
Confidence 3455644 3456677775 47889999999988877777777 8888888888 5555533
Q ss_pred -----cccceeeeeeccc---ccccccccccC
Q psy5139 192 -----GLSLQILQFQNLS---SDMHMTGLASR 215 (216)
Q Consensus 192 -----~fg~~i~~~Q~v~---ad~~~~~~~~r 215 (216)
+||+||++||.|| +||.+.++++|
T Consensus 315 a~~R~qfG~pi~~~~~vq~~La~~~~~~eaar 346 (607)
T 2uxw_A 315 ATNRTQFGEKIHNFGLIQEKLARMVMLQYVTE 346 (607)
T ss_dssp HHHCEETTEEGGGSHHHHHHHHHHHHHHHHHH
T ss_pred HHhccccCCchhhcHHHHHHHHHHHHHHHHHH
Confidence 4999999999999 99999988776
No 23
>3ii9_A Glutaryl-COA dehydrogenase; slipchip, microfluidics, screening, optimization, protein crystallization, structural genomics; HET: PGE PG4; 1.74A {Burkholderia pseudomallei 1710B} PDB: 3eon_A* 3eom_A* 3gqt_A* 3gnc_A* 3d6b_A
Probab=99.84 E-value=8.8e-25 Score=177.03 Aligned_cols=197 Identities=25% Similarity=0.370 Sum_probs=143.3
Q ss_pred CccccccCCCCCCCCCCCHHHHHHHHHHHHccCCChhHHHHHHHhhHHHHHHhcCChhHHHHHHHHHHhCCce-eeecCC
Q psy5139 2 TTLLGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEKYLPRLAQTDLM-GVEIPQ 80 (216)
Q Consensus 2 ~G~~~~~~p~~~GG~g~~~~~~~~~~ee~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~l~~g~~~-~~~~~e 80 (216)
.||+++.+|++|||.|+++.+...+.||+++.+.+++..+..|..++...|..+++++|+++|++++.+|+.+ +++++|
T Consensus 62 ~Gl~~l~~P~~~GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tE 141 (396)
T 3ii9_A 62 IGLLGPTIPEQYGGPGLDYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIFEFGSDAQKEKYLPKLATGEWIGCFGLTE 141 (396)
T ss_dssp TTCSSTTSCGGGTSCCCCHHHHHHHHHHHHTTCHHHHHHHHCCCCCCCHHHHHHSCHHHHHHHHHHHHHTSSCEEEECCC
T ss_pred CCCCCCCCChhhCCCCCCHHHHHHHHHHHHHhChhHHHHHHhhhhhHHHHHHHhCCHHHHHHHHHHHhCCCeeeEEEecC
Confidence 5999999999999999999999999999999998877666554445566789999999999999999999986 689999
Q ss_pred CCCCCCccHH-------------------------HHHHHHHHHHhhC--CC--c-eeEeeechh-h-hHHHHHhcCCH-
Q psy5139 81 EYGGPGLSFM-------------------------TDILIVEEIARVD--PS--V-SILVDIQNT-L-VNDLIIKLGTT- 127 (216)
Q Consensus 81 ~~gG~~~~~~-------------------------~~~~v~e~lar~~--~~--~-~~~v~~~~~-~-~~~~~~~~g~~- 127 (216)
|.+|+|...+ .+.+++ +++++ .. + .|+|+.+.+ + +.....++|.+
T Consensus 142 p~~Gsd~~~~~t~A~~~~~g~~lnG~K~~vs~a~~Ad~~~v--~a~~~~~g~~g~~~flV~~~~pGv~v~~~~~~~G~~~ 219 (396)
T 3ii9_A 142 PNHGSDPGSMVTRARKVPGGYSLSGSKMWITNSPIADVFVV--WAKLDEDGRDEIRGFILEKGCKGLSAPAIHGKVGLRA 219 (396)
T ss_dssp CC------CCCCEEEEETTEEEEEEEEEEEETGGGCSEEEE--EEEEEETTEEEEEEEEEETTCTTEECCBCCCCSSCTT
T ss_pred CCCCCChhhCeeEEEEeCCEEEEEEEEEeECCCccCCEEEE--EEEecCCCCCceEEEEEecCCCCeEeccccccccCCc
Confidence 9999876321 123333 55553 11 3 367776542 2 11222345544
Q ss_pred -HHhhhhchhc---ccccccccccchhhhhhhhccccCCceeeccceeeeecCcccCCCcceeeeeec---------ccc
Q psy5139 128 -EQKEKYLPRL---AQTDVSRTSRGYKALEWHAFYGRTDSLPLNDHLSHISSGCVGFDGQLKRWMVSC---------GLS 194 (216)
Q Consensus 128 -~~~~~~l~~~---~~~~lg~~~~g~~~~~~~~~~~~~~~~~l~g~k~~va~~~~g~~~~~~~~~~~~---------~fg 194 (216)
...+..|+++ .++.++. +.|++.....+...| ..+++..+|. ++.+++. +||
T Consensus 220 ~~~~~v~fddv~Vp~~~~l~~-~~g~~~~~~~l~~~r----------~~~aa~~~G~----a~~al~~a~~ya~~R~~fg 284 (396)
T 3ii9_A 220 SITGEIVLDEAFVPEENILPH-VKGLRGPFTCLNSAR----------YGIAWGALGA----AESCWHIARQYVLDRKQFG 284 (396)
T ss_dssp SCEEEEEEEEEEEEGGGBCTT-CCSTHHHHHHHHHHH----------HHHHHHHHHH----HHHHHHHHHHHHHHCEETT
T ss_pred CCeeEEEEccEEECHHHccCC-ChHHHHHHHHHHHHH----------HHHHHHHHHH----HHHHHHHHHHHHhhCeeCC
Confidence 3456778775 3567765 778887777777776 8888888888 6666644 499
Q ss_pred ceeeeeeccc---ccccccccccC
Q psy5139 195 LQILQFQNLS---SDMHMTGLASR 215 (216)
Q Consensus 195 ~~i~~~Q~v~---ad~~~~~~~~r 215 (216)
+||++||.|| +||.+.++++|
T Consensus 285 ~~i~~~q~vq~~la~~~~~~~aar 308 (396)
T 3ii9_A 285 RPLAANQLIQKKLADMQTEITLGL 308 (396)
T ss_dssp EEGGGSHHHHHHHHHHHHHHHHHH
T ss_pred CchhhhHHHHHHHHHHHHHHHHHH
Confidence 9999999999 99999999887
No 24
>4hr3_A Putative acyl-COA dehydrogenase; ssgcid, seattle structural genomics center for infectious DI niaid; HET: FAD; 1.80A {Mycobacterium abscessus}
Probab=99.84 E-value=2.4e-24 Score=175.45 Aligned_cols=198 Identities=17% Similarity=0.246 Sum_probs=147.5
Q ss_pred CccccccCCCCCCCCCCCHHHHHHHHHHHHccCCChhHHHH-HHHhhHHHHHHhcCChhHHHHHHHHHHhCCce-eeecC
Q psy5139 2 TTLLGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVD-IQNTLVNDLIIKLGTTEQKEKYLPRLAQTDLM-GVEIP 79 (216)
Q Consensus 2 ~G~~~~~~p~~~GG~g~~~~~~~~~~ee~~~~~~~~~~~~~-~~~~~~~~~l~~~g~~~~~~~~l~~l~~g~~~-~~~~~ 79 (216)
.||+++.+|++|||.|+++.+.+.+.||+++.+.+...+.. .+.......|..+++++|+++|++++.+|+.+ +++++
T Consensus 70 ~G~~~~~~P~~~GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~t 149 (415)
T 4hr3_A 70 AGLWNLFLPDPELGGGLSNSEYAPLAEQMGRSLFAPTVFNCNAPDSGNMEVLHRYGSQEQKEVWLEPLLEGDIRSAFCMT 149 (415)
T ss_dssp TTCSSTTCCCTTTSCCCCHHHHHHHHHHHTTCSSHHHHTTCCTTHHHHHHHHHHHCCHHHHHHTHHHHHTTSCEEEEECC
T ss_pred CCCcCcCCCHHHCCCCCCHHHHHHHHHHHhcccchHHHHHHhccccchHHHHHHhCCHHHHHHHHHHHhCCCceeEEEEc
Confidence 59999999999999999999999999999998643221111 11112335788999999999999999999986 78999
Q ss_pred CCC-CCCCccHH---------------------------HHHHHHHHHHhhCC------Cce-eEeeechh-h-hHHHHH
Q psy5139 80 QEY-GGPGLSFM---------------------------TDILIVEEIARVDP------SVS-ILVDIQNT-L-VNDLII 122 (216)
Q Consensus 80 e~~-gG~~~~~~---------------------------~~~~v~e~lar~~~------~~~-~~v~~~~~-~-~~~~~~ 122 (216)
||. +|+|+..+ .+.+++ +++++. +++ |+|+.+.+ + +.....
T Consensus 150 Ep~~~gsd~~~~~t~A~~~g~g~~lnG~K~~is~a~~~~Ad~~~v--~a~~~~~~~~~~g~~~flV~~~~pGv~v~~~~~ 227 (415)
T 4hr3_A 150 EPDVASSDATNMAATAVVEGDEVVINGRKWWSTGVGHPDCKVIIF--MGLTDPNAHRYARHSMVLVPMDTPGITVERMLP 227 (415)
T ss_dssp CTTSCTTSGGGCCCEEEEETTEEEEEEEEEEEETTTSTTEEEEEE--EEECCTTSCTTSSEEEEEEETTSTTEEEEEECC
T ss_pred CCCCCCCchhhCeeEEEEECCEEEEeeEEeeECCCCCCCCCEEEE--EEEeCCCCCCCCceEEEEEEcCCCceEecCCCC
Confidence 999 88886311 233444 666653 233 77876542 2 222344
Q ss_pred hcCCH----HHhhhhchhc---ccccccccccchhhhhhhhccccCCceeeccceeeeecCcccCCCcceeeeeec----
Q psy5139 123 KLGTT----EQKEKYLPRL---AQTDVSRTSRGYKALEWHAFYGRTDSLPLNDHLSHISSGCVGFDGQLKRWMVSC---- 191 (216)
Q Consensus 123 ~~g~~----~~~~~~l~~~---~~~~lg~~~~g~~~~~~~~~~~~~~~~~l~g~k~~va~~~~g~~~~~~~~~~~~---- 191 (216)
++|.+ ...+.+|+++ .+++++.++.|+......+...| ..+++..+|. ++.+++.
T Consensus 228 ~~g~r~~~~~~~~v~fddv~Vp~~~~lg~~~~g~~~~~~~l~~~r----------~~~aa~~~G~----a~~al~~a~~~ 293 (415)
T 4hr3_A 228 TMGFYDEPGGHGVVSFDNVRLPADAFIAGPGKGFEIAQGRLGPGR----------VHHAMRLIGL----AEVALEHACRR 293 (415)
T ss_dssp BTTBCCTTTCEEEEEEEEEEEEGGGBSSCTTCHHHHHHHHCSHHH----------HHHHHHHHHH----HHHHHHHHHHH
T ss_pred ccccCCCCCCeeEEEEccEEECHHHcCCCCCchHHHHHHHHhHHH----------HHHHHHHHHH----HHHHHHHHHHH
Confidence 55543 2567788875 56789999999988777777777 8888888998 6666543
Q ss_pred -----cccceeeeeeccc---ccccccccccC
Q psy5139 192 -----GLSLQILQFQNLS---SDMHMTGLASR 215 (216)
Q Consensus 192 -----~fg~~i~~~Q~v~---ad~~~~~~~~r 215 (216)
+||+||++||.|| +||++.++++|
T Consensus 294 a~~R~~fg~~i~~~q~vq~~la~~~~~~~aar 325 (415)
T 4hr3_A 294 GLDRTAFGKPLVNLGGNRERIADARIAINQTR 325 (415)
T ss_dssp HHHCEETTEEGGGSTTHHHHHHHHHHHHHHHH
T ss_pred HhcCccCCCcHHHhHHHHHHHHHHHHHHHHHH
Confidence 4999999999999 99999999887
No 25
>3mpi_A Glutaryl-COA dehydrogenase; alpha-beta fold, oxidoreductase; HET: FAD GRA; 2.05A {Desulfococcus multivorans} PDB: 3mpj_A*
Probab=99.83 E-value=4.1e-24 Score=173.19 Aligned_cols=197 Identities=24% Similarity=0.414 Sum_probs=149.8
Q ss_pred CccccccCCCCCCCCCC--CHHHHHHHHHHHHccCCChhHHHHHHHhhHHH-HHHhcCChhHHHHHHHHHHhCCce-eee
Q psy5139 2 TTLLGVEIPQEYGGPGL--SFMTDILIVEEIARVDPSVSILVDIQNTLVND-LIIKLGTTEQKEKYLPRLAQTDLM-GVE 77 (216)
Q Consensus 2 ~G~~~~~~p~~~GG~g~--~~~~~~~~~ee~~~~~~~~~~~~~~~~~~~~~-~l~~~g~~~~~~~~l~~l~~g~~~-~~~ 77 (216)
.||+++.+|++|||.|+ +..+.+.+.||+++.+.+++..+..| .++.. .+..+++++|+++|++.+.+|+.+ +++
T Consensus 49 ~Gl~~l~~P~~~GG~g~~~~~~~~~~v~eela~~~~~~~~~~~~~-~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a 127 (397)
T 3mpi_A 49 LGFFGTVIPEEYGGEGMDQGWLAAMIVTEEIARGSSALRVQLNME-VLGCAYTILTYGSEALKKKYVPKLSSAEFLGGFG 127 (397)
T ss_dssp TTTTCTTSCGGGTSCCCTTHHHHHHHHHHHHHHHCHHHHHHHHHH-TTTTHHHHHHHSCHHHHHHHHHHHHTTSSCCCEE
T ss_pred CCCCccCCChhhCCCCCCCCHHHHHHHHHHHHhhCchHHHHHHHH-HHhHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEE
Confidence 59999999999999999 99999999999999999888766655 35555 789999999999999999999986 689
Q ss_pred cCCCCCCCCccHH-------------------------HHHHHHHHHHhhCC-----Cce-eEe-eechh-hhHHHHHhc
Q psy5139 78 IPQEYGGPGLSFM-------------------------TDILIVEEIARVDP-----SVS-ILV-DIQNT-LVNDLIIKL 124 (216)
Q Consensus 78 ~~e~~gG~~~~~~-------------------------~~~~v~e~lar~~~-----~~~-~~v-~~~~~-~~~~~~~~~ 124 (216)
++||..|+|.... .+.+++ +++++. +++ |+| +.+.+ +......++
T Consensus 128 ~tEp~~gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v--~a~~~~~~~~~g~~~flV~~~~~~Gv~v~~~~~~ 205 (397)
T 3mpi_A 128 ITEPDAGSDVMAMSSTAEDKGDHWLLNGSKTWISNAAQADVLIY--YAYTDKAAGSRGLSAFVIEPRNFPGIKTSNLEKL 205 (397)
T ss_dssp CCBTTBSSCGGGCCCEEEECSSEEEEEEEEEEEETTTTCSSEEE--EEESCGGGGGGSEEEEEECTTTSTTEEEEECCCS
T ss_pred ecCCCCCCCcccCeEEEEEeCCEEEEEEEEEeeCCCcccCEEEE--EEEcCCCCCCCceEEEEEEcCCCCCeEeccCccc
Confidence 9999999886321 123333 455432 233 666 65432 211333445
Q ss_pred CCH--HHhhhhchhc---ccccccccccchhhhhhhhccccCCceeeccceeeeecCcccCCCcceeeeeec--------
Q psy5139 125 GTT--EQKEKYLPRL---AQTDVSRTSRGYKALEWHAFYGRTDSLPLNDHLSHISSGCVGFDGQLKRWMVSC-------- 191 (216)
Q Consensus 125 g~~--~~~~~~l~~~---~~~~lg~~~~g~~~~~~~~~~~~~~~~~l~g~k~~va~~~~g~~~~~~~~~~~~-------- 191 (216)
|.+ ...+..|+++ .+++++.++.|+......+...| ..+++..+|. ++.+++.
T Consensus 206 G~~~~~~~~v~fddv~Vp~~~~lg~~~~g~~~~~~~~~~~r----------~~~aa~~lG~----a~~al~~a~~~a~~R 271 (397)
T 3mpi_A 206 GSHASPTGELFLDNVKVPKENILGKPGDGARIVFGSLNHTR----------LSAAAGGVGL----AQACLDAAIKYCNER 271 (397)
T ss_dssp SCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHHHHHHH----------HHHHHHHHHH----HHHHHHHHHHHHHHC
T ss_pred cCcCCceeEEEEeeEEECHHHcCCCCCchHHHHHHHHHHHH----------HHHHHHHHHH----HHHHHHHHHHHHhhC
Confidence 544 3456677775 46788998999888777777777 8888888888 6666543
Q ss_pred -cccceeeeeeccc---ccccccccccC
Q psy5139 192 -GLSLQILQFQNLS---SDMHMTGLASR 215 (216)
Q Consensus 192 -~fg~~i~~~Q~v~---ad~~~~~~~~r 215 (216)
+||+||++||.|| +||.+.++++|
T Consensus 272 ~~fg~~i~~~q~vq~~la~~~~~~~aar 299 (397)
T 3mpi_A 272 RQFGKPIGDFQMNQDMIAQMAVEVEAAR 299 (397)
T ss_dssp EETTEEGGGSHHHHHHHHHHHHHHHHHH
T ss_pred cccCCchhhhHHHHHHHHHHHHHHHHHH
Confidence 4999999999999 99999999886
No 26
>1siq_A GCD, glutaryl-COA dehydrogenase; acyl-COA dehydrogenase, decarboxylation, flavin protein, oxidoreductase; HET: FAD; 2.10A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1 PDB: 2r0n_A* 1sir_A* 2r0m_A*
Probab=99.78 E-value=2.3e-22 Score=162.68 Aligned_cols=196 Identities=22% Similarity=0.300 Sum_probs=140.3
Q ss_pred CccccccCCCCCCCCCCCHHHHHHHHHHHHccCCChhHHHHHHHhhHHHHHHhcCChhHHHHHHHHHHhCCce-eeecCC
Q psy5139 2 TTLLGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEKYLPRLAQTDLM-GVEIPQ 80 (216)
Q Consensus 2 ~G~~~~~~p~~~GG~g~~~~~~~~~~ee~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~l~~g~~~-~~~~~e 80 (216)
.||+++.+ ++|||.|+++.+...+.||+++.+.+++..+..+..++...+..+++++|+++|++.+.+|+.+ +++++|
T Consensus 57 ~Gl~~l~~-~~~GG~g~~~~~~~~~~eel~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~l~~g~~~~~~a~tE 135 (392)
T 1siq_A 57 LGVLGPTI-KGYGCAGVSSVAYGLLARELERVDSGYRSAMSVQSSLVMHPIYAYGSEEQRQKYLPQLAKGELLGCFGLTE 135 (392)
T ss_dssp TTCSSTTC-EETTEECCCHHHHHHHHHHHHTTCHHHHHHHHHHHHTTHHHHHHHSCHHHHHHHHHHHHTTSSCEEEECCB
T ss_pred CCCCcccH-HhhCCCCCCHHHHHHHHHHHHHhCcHHHHHHHHHHhHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEECC
Confidence 59999999 9999999999999999999999988776555444445566788999999999999999999975 689999
Q ss_pred CCCCCCccHH---------------------------HHHHHHHHHHhhCCC-c-eeEeeechh-hh-HHHHHhcCCH--
Q psy5139 81 EYGGPGLSFM---------------------------TDILIVEEIARVDPS-V-SILVDIQNT-LV-NDLIIKLGTT-- 127 (216)
Q Consensus 81 ~~gG~~~~~~---------------------------~~~~v~e~lar~~~~-~-~~~v~~~~~-~~-~~~~~~~g~~-- 127 (216)
|.+|+|...+ .+.+++ +++++.+ + .|+|+.+.+ +. .....++|.+
T Consensus 136 p~~gsd~~~~~t~A~~~~~~~g~~lnG~K~~vs~~~~Ad~~~v--~a~~~~g~~~~flV~~~~pGv~v~~~~~~~G~~~~ 213 (392)
T 1siq_A 136 PNSGSDPSSMETRAHYNSSNKSYTLNGTKTWITNSPMADLFVV--WARCEDGCIRGFLLEKGMRGLSAPRIQGKFSLRAS 213 (392)
T ss_dssp TTBSSCGGGCCCEEEEETTTTEEEEEEEEEEEETGGGCSEEEE--EEEETTSCEEEEEEETTCTTEECCBCCCCSSSTTS
T ss_pred CCCCcCccccEEEEEEeCCCCEEEEEEEEEeecCCcccCEEEE--EEEECCCCEEEEEEeCCCCCeEeccccccccccCC
Confidence 9988876321 122233 4554432 3 366766432 11 1111234433
Q ss_pred HHhhhhchhc---ccccccccccchhhhhhhhccccCCceeeccceeeeecCcccCCCcceeeeeec---------cccc
Q psy5139 128 EQKEKYLPRL---AQTDVSRTSRGYKALEWHAFYGRTDSLPLNDHLSHISSGCVGFDGQLKRWMVSC---------GLSL 195 (216)
Q Consensus 128 ~~~~~~l~~~---~~~~lg~~~~g~~~~~~~~~~~~~~~~~l~g~k~~va~~~~g~~~~~~~~~~~~---------~fg~ 195 (216)
...+.+|+++ .++.++.. .|+......+...| ..+++..+|. ++.+++. +||+
T Consensus 214 ~~~~v~fd~v~Vp~~~~lg~~-~g~~~~~~~l~~~r----------~~~aa~~~G~----a~~al~~a~~ya~~R~~fG~ 278 (392)
T 1siq_A 214 ATGMIIMDGVEVPEENVLPGA-SSLGGPFGCLNNAR----------YGIAWGVLGA----SEFCLHTARQYALDRMQFGV 278 (392)
T ss_dssp CEEEEEEEEEEEEGGGBCTTC-CSSHHHHHHHHHHH----------HHHHHHHHHH----HHHHHHHHHHHHHHCEETTE
T ss_pred ceEEEEEccEEECHHHcCCcc-cCHHHHHHHHHHHH----------HHHHHHHHHH----HHHHHHHHHHHHhcCeeCCc
Confidence 3456677765 35667654 56666555555555 7777788888 6655543 4999
Q ss_pred eeeeeeccc---ccccccccccC
Q psy5139 196 QILQFQNLS---SDMHMTGLASR 215 (216)
Q Consensus 196 ~i~~~Q~v~---ad~~~~~~~~r 215 (216)
||++||.|| +||.++++++|
T Consensus 279 ~i~~~q~vq~~la~~~~~~~~ar 301 (392)
T 1siq_A 279 PLARNQLIQKKLADMLTEITLGL 301 (392)
T ss_dssp EGGGSHHHHHHHHHHHHHHHHHH
T ss_pred chhhhHHHHHHHHHHHHHHHHHH
Confidence 999999999 99999998876
No 27
>3mkh_A Nitroalkane oxidase; oxidoreductase flavoenzyme, acyl-COA dehydrogen flavoprotein, oxidoreductase; HET: FAD; 2.00A {Podospora anserina}
Probab=99.78 E-value=1.5e-22 Score=166.05 Aligned_cols=196 Identities=18% Similarity=0.192 Sum_probs=142.6
Q ss_pred CccccccCCCCCCCCCCCHHHHHHHHHHHHccCCChhHHHHHHHhhHHHHHHhcCChhHHHHHHHHHHhC--Cc-eeeec
Q psy5139 2 TTLLGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEKYLPRLAQT--DL-MGVEI 78 (216)
Q Consensus 2 ~G~~~~~~p~~~GG~g~~~~~~~~~~ee~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~l~~g--~~-~~~~~ 78 (216)
.||+++.+|++|||.|+++.+.+.+.||+++.+.+++..+..+ .++...+..+++++ ++++++++.+| +. .++++
T Consensus 57 ~Gl~~l~~P~e~GG~g~~~~~~~~v~eela~~~~~~~~~~~~~-~~~~~~l~~~g~~~-~~~~l~~~~~G~g~~~~~~a~ 134 (438)
T 3mkh_A 57 AGILKGQISPAHGGTGGTLIESAILVEECYSVEPSAALTIFAT-GLGLTPINLAAGPQ-HAEFLAPFLSGEGSPLASLVF 134 (438)
T ss_dssp TTTTGGGSCGGGTCCCCCHHHHHHHHHHHHHHCHHHHHHHHHH-HHHHHHHHHHCCGG-GHHHHGGGSSSCSCCCEEEEC
T ss_pred CCCCCCCCCcccCCCCCCHHHHHHHHHHHHhhChhHHHHHHHh-hHHHHHHHhhCCHH-HHHHHHHHhcCCCCceEEEEE
Confidence 5999999999999999999999999999999998776554433 34556678899999 89999999986 34 57899
Q ss_pred CCCCCCCC-----cc--------------------HH----------HHHHHHHHHHhhCC-----------Cce-eEee
Q psy5139 79 PQEYGGPG-----LS--------------------FM----------TDILIVEEIARVDP-----------SVS-ILVD 111 (216)
Q Consensus 79 ~e~~gG~~-----~~--------------------~~----------~~~~v~e~lar~~~-----------~~~-~~v~ 111 (216)
+||.+|++ +. ++ .+.+++ +++++. .++ |+|+
T Consensus 135 tEp~~gs~~~~sd~~~~~t~A~~~g~g~~lnG~K~~is~a~~~~~~~Ad~~~v--~a~~~~~~~~~~~~~~~g~~~flV~ 212 (438)
T 3mkh_A 135 SEPGGVANALEKGAPGFQTTARLEGDEWVINGEKMWATNCAGWDFKGCDLACV--VCRDATTPLEEGQDPENKVMIILVT 212 (438)
T ss_dssp CCTTCCTTTTCTTSCCCSCEEEEETTEEEEEEEECSCTTTTCTTSSCCSEEEE--EEEECSSCCCTTCCGGGGEEEEEEE
T ss_pred ccCCCCCCccccccccceeEEEEeCCEEEEEeEEEEecCCCccccccCcEEEE--EEEecCcccCcccCCCCceEEEEEe
Confidence 99998873 32 11 122233 444421 122 5666
Q ss_pred ech-----h--h-hHHHHHhcCCHH--Hhhhhchhc---ccccccccccchhhhhhhhccccCCceeeccceeeeecCcc
Q psy5139 112 IQN-----T--L-VNDLIIKLGTTE--QKEKYLPRL---AQTDVSRTSRGYKALEWHAFYGRTDSLPLNDHLSHISSGCV 178 (216)
Q Consensus 112 ~~~-----~--~-~~~~~~~~g~~~--~~~~~l~~~---~~~~lg~~~~g~~~~~~~~~~~~~~~~~l~g~k~~va~~~~ 178 (216)
.+. + + +.....++|.+. ..+.+|+++ .++++|.++.|+......+...| ..+++..+
T Consensus 213 ~~~~~~~~pG~v~v~~~~~~~G~r~~~~~~v~fddv~VP~~~~lg~~~~g~~~~~~~l~~~r----------~~~aa~~l 282 (438)
T 3mkh_A 213 RADLDRNGEGSFEVLRHVATPGHTSVSGPHVRYTNVRVPTKNVLCPAGQGAKVAFGAFDGSA----------VLVGAMGV 282 (438)
T ss_dssp HHHHHHHCTTSEEEEECCCCSSCTTCCCCEEEEEEEEEEGGGEEECTTTHHHHHHHHHHHHH----------HHHHHHHH
T ss_pred cCccccCCCCcEEecCcCCCcCCcCCCceEEEECcEEECHHHcCCCCCchHHHHHHHHHHHH----------HHHHHHHH
Confidence 532 1 1 112223455543 245778874 56789999999988877777777 88888889
Q ss_pred cCCCcceeeeeec---------ccc-ceeeeeeccc---ccccccccccC
Q psy5139 179 GFDGQLKRWMVSC---------GLS-LQILQFQNLS---SDMHMTGLASR 215 (216)
Q Consensus 179 g~~~~~~~~~~~~---------~fg-~~i~~~Q~v~---ad~~~~~~~~r 215 (216)
|. ++.+++. +|| +||++||.|| +||+++++++|
T Consensus 283 G~----a~~al~~a~~ya~~R~~~g~~pi~~~q~vq~~la~~~~~~~aar 328 (438)
T 3mkh_A 283 GL----MRAAFDAALKFAKEDNRGGAVPLLERQAFADLLSGVKIQTEAAR 328 (438)
T ss_dssp HH----HHHHHHHHHHHHHHCCTTCSSCGGGSHHHHHHHHHHHHHHHHHH
T ss_pred HH----HHHHHHHHHHHHhhcEeCCCeeccccHHHHHHHHHHHHHHHHHH
Confidence 98 6666543 488 9999999999 99999999887
No 28
>2c12_A Nitroalkane oxidase; oxidoreductase, flavoenzyme, acyl-COA dehydrogenase, long cell EDGE, FAD, inhibitor, flavoprotein; HET: SPM FAD PE4; 2.07A {Fusarium oxysporum} SCOP: a.29.3.1 e.6.1.1 PDB: 2c0u_A* 2zaf_A* 2reh_A* 3d9g_A* 3d9f_A* 3d9d_A* 3d9e_A* 3fcj_A*
Probab=99.78 E-value=3.7e-22 Score=163.70 Aligned_cols=197 Identities=19% Similarity=0.243 Sum_probs=144.5
Q ss_pred CccccccCCCCCCCCCCCHHHHHHHHHHHHccCCChhHHHHHHHhhHHHHHHhcCChhHHHHHHHHHH--hCCce-eeec
Q psy5139 2 TTLLGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEKYLPRLA--QTDLM-GVEI 78 (216)
Q Consensus 2 ~G~~~~~~p~~~GG~g~~~~~~~~~~ee~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~l~--~g~~~-~~~~ 78 (216)
.||+++.+|++|||.|+++.+.+.+.||+++.+.+++..+..+. +....+..+++++|+++|++++. +|+.+ ++++
T Consensus 55 ~Gl~~~~~P~~~GG~g~~~~~~~~v~eela~~~~~~~~~~~~~~-~~~~~l~~~g~~~q~~~~l~~~~~~~G~~~~~~a~ 133 (439)
T 2c12_A 55 HGLIKAQVPIPLGGTMESLVHESIILEELFAVEPATSITIVATA-LGLMPVILCDSPSLQEKFLKPFISGEGEPLASLMH 133 (439)
T ss_dssp TTTTGGGSBGGGTCCBCCHHHHHHHHHHHHTTCCTTHHHHHHHH-HHHHHHHHSSCHHHHHHHTGGGGSSCSCCCEEEEC
T ss_pred CCCCCCCCChhhCCCCCCHHHHHHHHHHHHhhChHHHHHHHHhH-HHHHHHHHhCCHHHHHHHHHHHhhcCCCEEEEEEe
Confidence 59999999999999999999999999999999998877655443 45567889999999999999998 57764 7899
Q ss_pred CCCCCCCC-----cc--------------------HH----------HHHHHHHHHHhh-C----C---------Cc-ee
Q psy5139 79 PQEYGGPG-----LS--------------------FM----------TDILIVEEIARV-D----P---------SV-SI 108 (216)
Q Consensus 79 ~e~~gG~~-----~~--------------------~~----------~~~~v~e~lar~-~----~---------~~-~~ 108 (216)
+||.+|++ .. ++ .+.+++ ++++ + + ++ .|
T Consensus 134 tEp~~Gs~~~~sd~~~~~t~A~~~~~g~~lnG~K~~is~~~~~~~~~Ad~~~v--~ar~~~~~~~~~~~~~~~~~g~~~f 211 (439)
T 2c12_A 134 SEPNGTANWLQKGGPGLQTTARKVGNEWVISGEKLWPSNSGGWDYKGADLACV--VCRVSDDPSKPQDPNVDPATQIAVL 211 (439)
T ss_dssp CCTTCSTTTTCTTSCCCSCEEEEETTEEEEEEEEECCTTTTTTTSSCCSEEEE--EEEECSCTTSCCCTTSCGGGGEEEE
T ss_pred cCCCCCCCccccccccceeEEEEcCCEEEEEeEEEeecCCCccccccCcEEEE--EEEcCCcccCccccccCCCCceEEE
Confidence 99988863 21 11 122333 5565 4 1 12 36
Q ss_pred Eeeechh-------h-hHHHHHhcCCH--HHhhhhchhc---ccccccccccchh-hhhhhhccccCCceeeccceeeee
Q psy5139 109 LVDIQNT-------L-VNDLIIKLGTT--EQKEKYLPRL---AQTDVSRTSRGYK-ALEWHAFYGRTDSLPLNDHLSHIS 174 (216)
Q Consensus 109 ~v~~~~~-------~-~~~~~~~~g~~--~~~~~~l~~~---~~~~lg~~~~g~~-~~~~~~~~~~~~~~~l~g~k~~va 174 (216)
+|+.+.+ + +.....++|.+ ...+.+|+++ .+++++.++.|+. .....+...| ..++
T Consensus 212 lV~~~~pGv~~~~Gv~v~~~~~~~G~r~~~~~~v~fddv~VP~~~~lg~~~~g~~~~~~~~l~~~r----------~~~a 281 (439)
T 2c12_A 212 LVTRETIANNKKDAYQILGEPELAGHITTSGPHTRFTEFHVPHENLLCTPGLKAQGLVETAFAMSA----------ALVG 281 (439)
T ss_dssp EECHHHHHTSCGGGEEEEECCCBSSCTTCCCCEEEEEEEEEEGGGBCSCTTHHHHHHHHHHHHHHH----------HHHH
T ss_pred EEECCCCcccCCCceEeCCcccccccCCCCceEEEEccEEecHHHcCCCCCccHHHHHHHHHHHHH----------HHHH
Confidence 6765432 0 11223445544 3456778874 4678888888888 6666666666 8888
Q ss_pred cCcccCCCcceeeeee----------ccccceeeeeeccc---ccccccccccC
Q psy5139 175 SGCVGFDGQLKRWMVS----------CGLSLQILQFQNLS---SDMHMTGLASR 215 (216)
Q Consensus 175 ~~~~g~~~~~~~~~~~----------~~fg~~i~~~Q~v~---ad~~~~~~~~r 215 (216)
+..+|. ++.+++ .+||+||++||.|| +||++.++++|
T Consensus 282 a~~~G~----a~~al~~a~~ya~~rr~~~G~~i~~~q~vq~~la~~~~~~~aar 331 (439)
T 2c12_A 282 AMAIGT----ARAAFEEALVFAKSDTRGGSKHIIEHQSVADKLIDCKIRLETSR 331 (439)
T ss_dssp HHHHHH----HHHHHHHHHHHHHHCCTTSSSCGGGSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHH----HHHHHHHHHHHHhhceeeCCeehhccHHHHHHHHHHHHHHHHHH
Confidence 888888 555543 24899999999999 99999999876
No 29
>3mxl_A Nitrososynthase; flavin monooxygenase, acyl-COA dehydrogenas oxidoreductase; 3.15A {Micromonospora carbonacea}
Probab=99.72 E-value=9.3e-21 Score=153.40 Aligned_cols=198 Identities=17% Similarity=0.098 Sum_probs=138.8
Q ss_pred CccccccCCCCCCCCC-CCHHHHHHHHHHHHccCCChhHHHHHHHhhHHHHH--HhcCChhHH---HHHHHHHHhCCce-
Q psy5139 2 TTLLGVEIPQEYGGPG-LSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLI--IKLGTTEQK---EKYLPRLAQTDLM- 74 (216)
Q Consensus 2 ~G~~~~~~p~~~GG~g-~~~~~~~~~~ee~~~~~~~~~~~~~~~~~~~~~~l--~~~g~~~~~---~~~l~~l~~g~~~- 74 (216)
.||+++.+|++|||.| .++.+.+.+.||+++.+.+++..+..|...+...+ ..+++++|+ ++|++++.+|+.+
T Consensus 51 ~Gl~~~~~P~~~GG~g~~~~~~~~~~~eel~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~qk~~~~~~l~~~~~g~~~~ 130 (395)
T 3mxl_A 51 LGLMGATVPAELGGLGLTRLYDVATALMRLAEADASTALAWHVQLSRGLTLTYEWQHGTPPVRAMAERLLRAMAEGEAAV 130 (395)
T ss_dssp HTGGGCSSCTTTTSCCCCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHTSCCE
T ss_pred CCCcCcCCChhhCCCCCcCHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHHHhhcCCHHHHhHHHHHHHHHhcCCcEE
Confidence 4999999999999999 89999999999999999988876665543444433 367999999 9999999999965
Q ss_pred eeecCCCCCCCCc-------c-------------HHHHHHHHHHHHhhCCC-----ce-eEeeechh-h-hHHHHHhcCC
Q psy5139 75 GVEIPQEYGGPGL-------S-------------FMTDILIVEEIARVDPS-----VS-ILVDIQNT-L-VNDLIIKLGT 126 (216)
Q Consensus 75 ~~~~~e~~gG~~~-------~-------------~~~~~~v~e~lar~~~~-----~~-~~v~~~~~-~-~~~~~~~~g~ 126 (216)
+++++||.+|... . ...+.+++ +++++.. ++ |+|+.+.+ + ......++|.
T Consensus 131 ~~a~tEp~~~~~~~~t~~~~g~~lnG~K~~is~a~~Ad~~~v--~a~~~~~~~~~g~~~flV~~~~pGv~v~~~~~~~G~ 208 (395)
T 3mxl_A 131 CGALKDAPGVVTELHSDGAGGWLLSGRKVLVSMAPIATHFFV--HAQRRDDDGSVFLAVPVVHRDAPGLTVLDNWDGLGM 208 (395)
T ss_dssp ECCCSBCTTCCCEEEECSSSCEEEEEEEEEETTGGGCSEECC--CEEEECTTSCEEEECCCEETTCTTEEEECCCCBSSC
T ss_pred EEEecCCCCCCCceEEecCCEEEEeeEEEEecCccccCEEEE--EEEeCCCCCCCceEEEEEECCCCceEeCCCchhcCC
Confidence 7889998764211 0 11233444 5665431 23 67776542 2 2222344553
Q ss_pred H--HHhhhhchhc---cccccc--ccccchhhhhhhhccccCCceeeccceeeeecCcccCCCcceeeeeec----cccc
Q psy5139 127 T--EQKEKYLPRL---AQTDVS--RTSRGYKALEWHAFYGRTDSLPLNDHLSHISSGCVGFDGQLKRWMVSC----GLSL 195 (216)
Q Consensus 127 ~--~~~~~~l~~~---~~~~lg--~~~~g~~~~~~~~~~~~~~~~~l~g~k~~va~~~~g~~~~~~~~~~~~----~fg~ 195 (216)
+ ...+.+|+++ .+++++ .++.|++.........| ..+++..+|. ++.+++. +-+|
T Consensus 209 r~~~~~~v~f~~v~Vp~~~~lg~~~~g~g~~~~~~~~~~~r----------~~~aa~~~G~----a~~al~~a~~~a~~r 274 (395)
T 3mxl_A 209 RASGTLEVVFDRCPVRADELLERGPVGARRDAVLAGQTVSS----------ITMLGIYAGI----AQAARDIAVGFCAGR 274 (395)
T ss_dssp TTSCCEEEEEEEEEECGGGCCEEEESSCCCTTHHHHHHHHH----------GGGHHHHHHH----HHHHHHHHHHHHHTT
T ss_pred CCCCcceEEEcceEcCHHHhcCCCCCCccHHHHHhhhHHHH----------HHHHHHHHHH----HHHHHHHHHHHHcCC
Confidence 3 4456778774 467777 66666654433233344 7778888888 6666544 4689
Q ss_pred eeeeeeccc---ccccccccccC
Q psy5139 196 QILQFQNLS---SDMHMTGLASR 215 (216)
Q Consensus 196 ~i~~~Q~v~---ad~~~~~~~~r 215 (216)
||++||.|| +||.++++++|
T Consensus 275 ~i~~~q~vq~~la~~~~~~~aar 297 (395)
T 3mxl_A 275 GGEPRAGARALVAGLDTRLYALR 297 (395)
T ss_dssp CSCCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHH
Confidence 999999999 99999999887
No 30
>2wbi_A Acyl-COA dehydrogenase family member 11; human, phosphoprotein, oxidoreducta; HET: FAD; 2.80A {Homo sapiens}
Probab=99.71 E-value=3.2e-21 Score=157.58 Aligned_cols=195 Identities=18% Similarity=0.214 Sum_probs=142.0
Q ss_pred CccccccCCCCCCCCCCCHHHHHHHHHHHHccCCC-hhHHHHHHHhhHHHHHHhcCChhHHHHHHHHHHhCCce-eeecC
Q psy5139 2 TTLLGVEIPQEYGGPGLSFMTDILIVEEIARVDPS-VSILVDIQNTLVNDLIIKLGTTEQKEKYLPRLAQTDLM-GVEIP 79 (216)
Q Consensus 2 ~G~~~~~~p~~~GG~g~~~~~~~~~~ee~~~~~~~-~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~l~~g~~~-~~~~~ 79 (216)
.||+++.+|+ |.|+++.+...+.||+++.+.+ .++....+...+...|..+++++|+++|++++.+|+.+ +++++
T Consensus 79 ~Gl~~l~~P~---G~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~qk~~~l~~l~~G~~~~~~a~t 155 (428)
T 2wbi_A 79 EGLWNLFLPA---VSGLSHVDYALIAEETGKCFFAPDVFNCQAPDTGNMEVLHLYGSEEQKKQWLEPLLQGNITSCFCMT 155 (428)
T ss_dssp TTCCSTTCHH---HHCCCHHHHHHHHHHHTTSTTHHHHTTCCTTHHHHHHHHHHHCCHHHHHHTHHHHHHTSSEEEEECC
T ss_pred CCCCeecCCC---CCCCCHHHHHHHHHHHHhhcchhhhHhhhccchhHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEEe
Confidence 5999999999 8899999999999999998642 22211111123455788899999999999999999985 78999
Q ss_pred CCC-CCCCccH-------------------------H--HHHHHHHHHHhhCC-------Cc-eeEeeechh-h-hHHHH
Q psy5139 80 QEY-GGPGLSF-------------------------M--TDILIVEEIARVDP-------SV-SILVDIQNT-L-VNDLI 121 (216)
Q Consensus 80 e~~-gG~~~~~-------------------------~--~~~~v~e~lar~~~-------~~-~~~v~~~~~-~-~~~~~ 121 (216)
||. .|+|... . .+.+++ +++++. ++ .|+|+.+.+ + +....
T Consensus 156 Ep~~aGsd~~~~~t~A~~~~~g~~lnG~K~~is~a~~~~Ad~~~v--~art~~~~~~~~~g~~~flV~~~~pGv~v~~~~ 233 (428)
T 2wbi_A 156 EPDVASSDATNIECSIQRDEDSYVINGKKWWSSGAGNPKCKIAIV--LGRTQNTSLSRHKQHSMILVPMNTPGVKIIRPL 233 (428)
T ss_dssp CTTSCTTSGGGCCCEEEEETTEEEEEEEEEEEETTTSTTEEEEEE--EEECCCTTSCGGGCEEEEEEETTSTTEEEEEEC
T ss_pred cCCcCCCCcccceEEEEEeCCEEEEEeEEeccCCCCCCcCCEEEE--EEEeCCccCCCCCceEEEEEECCCCcEEecCCC
Confidence 999 8888531 1 223344 566543 23 377876532 2 21233
Q ss_pred HhcCCHH-----Hhhhhchhc---ccccccccccchhhhhhhhccccCCceeeccceeeeecCcccCCCcceeeeeec--
Q psy5139 122 IKLGTTE-----QKEKYLPRL---AQTDVSRTSRGYKALEWHAFYGRTDSLPLNDHLSHISSGCVGFDGQLKRWMVSC-- 191 (216)
Q Consensus 122 ~~~g~~~-----~~~~~l~~~---~~~~lg~~~~g~~~~~~~~~~~~~~~~~l~g~k~~va~~~~g~~~~~~~~~~~~-- 191 (216)
.++|.+. ..+.+|+++ .+++++.++.|+......+...| ..+++..+|. ++.+++.
T Consensus 234 ~~~G~~~~~~~~~~~v~fddv~VP~~~~lg~~g~g~~~~~~~l~~~r----------~~~aa~~~G~----a~~al~~a~ 299 (428)
T 2wbi_A 234 SVFGYTDNFHGGHFEIHFNQVRVPATNLILGEGRGFEISQGRLGPGR----------IHHCMRTVGL----AERALQIMC 299 (428)
T ss_dssp CBTTBCCGGGCCEEEEEEEEEEEEGGGBCSCTTCHHHHHHHHHHHHH----------HHHHHHHHHH----HHHHHHHHH
T ss_pred CccccCCCCCCCeEEEEeCceEECHHHhcCCccchHHHHHHHHHhHH----------HHHHHHHHHH----HHHHHHHHH
Confidence 4555431 456788875 56788988889887776667776 7888888888 6665543
Q ss_pred -------cccceeeeeeccc---ccccccccccC
Q psy5139 192 -------GLSLQILQFQNLS---SDMHMTGLASR 215 (216)
Q Consensus 192 -------~fg~~i~~~Q~v~---ad~~~~~~~~r 215 (216)
+||+||++||.|| +||.++++++|
T Consensus 300 ~ya~~R~~fG~~i~~~q~vq~~la~~~~~~~aar 333 (428)
T 2wbi_A 300 ERATQRIAFKKKLYAHEVVAHWIAESRIAIEKIR 333 (428)
T ss_dssp HHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHH
T ss_pred HHHhhCcccCCChhhhHHHHHHHHHHHHHHHHHH
Confidence 4999999999999 99999999886
No 31
>3m9v_A FAD-dependent oxidoreductase; KIJD3, fatty acyl-COA dehydrogenase family, kijanose, kijani FAD, flavoprotein; HET: TYD; 2.05A {Actinomadura kijaniata}
Probab=99.68 E-value=3.6e-20 Score=151.87 Aligned_cols=198 Identities=16% Similarity=0.112 Sum_probs=136.7
Q ss_pred CccccccCCCCCCCCC-CCHHHHHHHHHHHHccCCChhHHHHHHHhhHHHH--HHhcCChhH---HHHHHHHHHhCCce-
Q psy5139 2 TTLLGVEIPQEYGGPG-LSFMTDILIVEEIARVDPSVSILVDIQNTLVNDL--IIKLGTTEQ---KEKYLPRLAQTDLM- 74 (216)
Q Consensus 2 ~G~~~~~~p~~~GG~g-~~~~~~~~~~ee~~~~~~~~~~~~~~~~~~~~~~--l~~~g~~~~---~~~~l~~l~~g~~~- 74 (216)
.||+++.+|++|||.| .++.+.+.+.||+++.+.+++..+..+....... +..+|+++| +++|++++.+|+.+
T Consensus 62 ~Gl~~l~~P~~~GG~gl~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~q~~~k~~~l~~l~~g~~~~ 141 (439)
T 3m9v_A 62 DGLMGATVPAELGGLGVDRLYDVAVALLAVARADASTALALHMQLSRGLTLGYEWRHGDERARTLAERILRGMVAGDAVV 141 (439)
T ss_dssp TTGGGTTSCGGGTSCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHTCCCE
T ss_pred CCCccCCCChhhCCCCCCCHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhCCCceE
Confidence 5999999999999999 8999999999999999988877666554334433 346799999 99999999999965
Q ss_pred eeecCCCCCCCC---------c-----------cHHHHHHHHHHHHhhCC-----Cce-eEeeechh--hhHHHHHhcCC
Q psy5139 75 GVEIPQEYGGPG---------L-----------SFMTDILIVEEIARVDP-----SVS-ILVDIQNT--LVNDLIIKLGT 126 (216)
Q Consensus 75 ~~~~~e~~gG~~---------~-----------~~~~~~~v~e~lar~~~-----~~~-~~v~~~~~--~~~~~~~~~g~ 126 (216)
+.+++|+..+.. + ....+++++ +++++. .++ |+|+.+.+ .+.....++|.
T Consensus 142 ~~a~tEp~~~~~~~~t~~~~g~vlnG~K~~~s~a~~Ad~~~v--~art~~~~~~~g~~~flVp~~~pGv~i~~~~~~~G~ 219 (439)
T 3m9v_A 142 CSGIKDHHTAVTTLRPDGAGGWLLSGRKTLVSMAPVGTHFVI--NARTDGTDGPPRLASPVVTRDTPGFTVLDNWDGLGM 219 (439)
T ss_dssp EEECEECTTCCCEEEECSSSCEEEEEEEEEETTGGGCSEEEE--CEEECC--CCCCEEEEEEETTCTTEEECCCCCCSSC
T ss_pred EEeecCCCCCCCceeeccCCEEEEEeEEEeecCccccCEEEE--EEEecCCCCCceeEEEEEECCCCCeEECCCcccCCc
Confidence 788888865321 0 011233344 566543 133 67876542 22222344553
Q ss_pred H--HHhhhhchhc---cccccc--ccccchhhhhhhhccccCCceeeccceeeeecCcccCCCcceeeeee----ccccc
Q psy5139 127 T--EQKEKYLPRL---AQTDVS--RTSRGYKALEWHAFYGRTDSLPLNDHLSHISSGCVGFDGQLKRWMVS----CGLSL 195 (216)
Q Consensus 127 ~--~~~~~~l~~~---~~~~lg--~~~~g~~~~~~~~~~~~~~~~~l~g~k~~va~~~~g~~~~~~~~~~~----~~fg~ 195 (216)
+ ...+.+|+++ .+++++ .++.|+.......+..+ ..+++..+|. ++.+++ ++-+|
T Consensus 220 ~~~~~~~v~fddv~VP~~~~lg~~~~g~g~~~~~~~~~~~r----------~~~aa~~~G~----a~~al~~a~~~a~~r 285 (439)
T 3m9v_A 220 RASGTVDIVFDDCPIPADHVLMRDPVGARNDAVLAGQTVSS----------VSVLGVYVGV----AQAAYDTAVAALERR 285 (439)
T ss_dssp TTSCCEEEEEEEEEECGGGEEECCC--CCCGGGHHHHHHHH----------GGGHHHHHHH----HHHHHHHHHHHHHTC
T ss_pred CCCCceeEEEeeeEcCHHHccCCCCCCchHHHHhhchHHHH----------HHHHHHHHHH----HHHHHHHHHHHHcCC
Confidence 3 4456778874 467787 66666654332233344 7777788888 665554 45799
Q ss_pred eeeeeeccc---ccccccccccC
Q psy5139 196 QILQFQNLS---SDMHMTGLASR 215 (216)
Q Consensus 196 ~i~~~Q~v~---ad~~~~~~~~r 215 (216)
||.+||.|| +||.++++++|
T Consensus 286 ~i~~~~~vq~~la~~~~~~~aar 308 (439)
T 3m9v_A 286 PEPPQAAALTLVAEIDSRLYALR 308 (439)
T ss_dssp SSCCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHH
Confidence 999999999 99999999887
No 32
>2jbr_A P-hydroxyphenylacetate hydroxylase C2 oxygenase C; flavoenzyme hydroxylase, oxidoreductase; 2.3A {Acinetobacter baumannii} PDB: 2jbs_A* 2jbt_A*
Probab=99.62 E-value=1.3e-19 Score=147.86 Aligned_cols=194 Identities=15% Similarity=0.002 Sum_probs=128.6
Q ss_pred CccccccCCCCCCCCCCCHHHHHHHHHHHHccCCChhHHHHHHHhhHHHHHHhcCChhHHHHHHHHHHhCCc-eeeecCC
Q psy5139 2 TTLLGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEKYLPRLAQTDL-MGVEIPQ 80 (216)
Q Consensus 2 ~G~~~~~~p~~~GG~g~~~~~~~~~~ee~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~l~~g~~-~~~~~~e 80 (216)
.||+++.+|++|||.|+++.+...+.||+++.+.++++.+..+ .+....+..+++++|+++|++. ++. .+.++++
T Consensus 75 ~Gl~~l~~P~e~GG~g~~~~~~~~v~eela~~~~~~~~~~~~~-~~~~~~l~~~g~~~q~~~~l~~---g~~~~a~a~tp 150 (422)
T 2jbr_A 75 IGLHRAFQPKVYGGLEMSLPDFANCIVTLAGACAGTAWAFSLL-CTHSHQIAMFSKQLQDEIWLKD---PDATASSSIAP 150 (422)
T ss_dssp TTGGGSSSCGGGTCCCCCHHHHHHHHHHHHHHCHHHHHHHHHH-HHHHHHHTTSCHHHHHHHHTTC---TTCCEEEECSC
T ss_pred CCchhcCCchhcCCCCCCHHHHHHHHHHHHhhCcCHHHHHHHH-HHHHHHHHhCCHHHHHHHHccC---CCeEEEeecCC
Confidence 5999999999999999999999999999999999887655544 3566678889999999999985 554 3455442
Q ss_pred C------CCCCCcc---------HHHHHHHHHHHHhhCC-----Cc-eeEeeechhhhHHHHHhcCCH--HHhhhhchhc
Q psy5139 81 E------YGGPGLS---------FMTDILIVEEIARVDP-----SV-SILVDIQNTLVNDLIIKLGTT--EQKEKYLPRL 137 (216)
Q Consensus 81 ~------~gG~~~~---------~~~~~~v~e~lar~~~-----~~-~~~v~~~~~~~~~~~~~~g~~--~~~~~~l~~~ 137 (216)
. .+|.-++ ...+.+++ +++++. ++ .|+|+.+...+.....++|.+ ...+.+|+++
T Consensus 151 ~t~A~~~~~g~~lnG~K~~is~a~~Ad~~~v--~a~~~~~~g~~g~~~flV~~~gv~v~~~~~~~G~r~~~~~~v~fddv 228 (422)
T 2jbr_A 151 FGKVEEVEGGIILNGDYGWSSGCDHAEYAIV--GFNRFDADGNKIYSFGVIPRSDYEIVDNWYAQAIKSSGSKMLKLVNV 228 (422)
T ss_dssp CSEEEEETTEEEEEEEEEEETTGGGCSEEEE--EEEEECTTSCEEEEEEEEEGGGCEEECCCCBSSSGGGCCEEEEEEEE
T ss_pred CeeEEEeCCEEEEeeeEeeecCCccccEEEE--EEEecCCCCCceeEEEEEEcCceEEeCCccccCcCCCCCCcEEEeeE
Confidence 1 1111110 11233344 566532 23 367776532222222445644 3455677775
Q ss_pred ---cccccccc--------ccc-----hhhhhhhhccccCCceeeccceeeeecCcccCCCcceeeeee--------c--
Q psy5139 138 ---AQTDVSRT--------SRG-----YKALEWHAFYGRTDSLPLNDHLSHISSGCVGFDGQLKRWMVS--------C-- 191 (216)
Q Consensus 138 ---~~~~lg~~--------~~g-----~~~~~~~~~~~~~~~~~l~g~k~~va~~~~g~~~~~~~~~~~--------~-- 191 (216)
.+++++.+ +.| +......+...| ..+++..+|. ++.+++ +
T Consensus 229 ~VP~~~~lg~~~~~~g~~~g~g~~~~~~~~~~~~~~~~r----------~~~aa~~lG~----a~~al~~a~~ya~~R~~ 294 (422)
T 2jbr_A 229 FIPEYRISKAKDMMEGKSAGFGLYPDSKIFYTPYRPYFA----------SGFSAVSLGI----AERMIEAFKEKQRNRVR 294 (422)
T ss_dssp EEEGGGEEEHHHHHHTCSTTTTSCTTCSSSSSCHHHHHT----------THHHHHHHHH----HHHHHHHHHHHHTTCBC
T ss_pred EecHHHeecccccccCCCCcccccCCCcccccchHHHHH----------HHHHHHHHHH----HHHHHHHHHHHHhcCCC
Confidence 45667654 444 333333444445 7778888887 555442 2
Q ss_pred -cccceeeeeeccc---ccccccccccC
Q psy5139 192 -GLSLQILQFQNLS---SDMHMTGLASR 215 (216)
Q Consensus 192 -~fg~~i~~~Q~v~---ad~~~~~~~~r 215 (216)
+||+||++||.|| +||.++++++|
T Consensus 295 ~~fG~~i~~~q~vq~~la~~~~~~~aar 322 (422)
T 2jbr_A 295 AYTGANVGLATPALMRIAESTHQVAAAR 322 (422)
T ss_dssp TTTCCBCTTCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCccccCHHHHHHHHHHHHHHHHHH
Confidence 7999999999999 99999999876
No 33
>2rfq_A 3-HSA hydroxylase, oxygenase; rhodococcus SP. RHA1, structural genomics protein structure initiative, midwest center for structural genomics, MCSG; HET: 1PS; 1.65A {Rhodococcus SP} PDB: 3aff_A 3afe_A
Probab=99.58 E-value=8.1e-19 Score=141.97 Aligned_cols=194 Identities=13% Similarity=0.039 Sum_probs=126.8
Q ss_pred CccccccCCCCCCCCCCCHHHHHHHHHHHHccCCChhHHHHHHHhhHHHHHHhcCChhHHHHHHHHHHhCCc-eeeecCC
Q psy5139 2 TTLLGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEKYLPRLAQTDL-MGVEIPQ 80 (216)
Q Consensus 2 ~G~~~~~~p~~~GG~g~~~~~~~~~~ee~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~l~~g~~-~~~~~~e 80 (216)
.||+++.+|++|||.|+++.+.+.+.||+++.+.++++.+..+. +....+..+++++|+++|++ +++. .+.++++
T Consensus 47 ~Gl~~~~~P~~~GG~g~~~~~~~~v~eela~~~~~~~~~~~~~~-~~~~~l~~~g~~~q~~~~l~---~g~~~~~~a~tp 122 (394)
T 2rfq_A 47 TGFFRLLQPEQWGGYQADPVLFYSAVRKIASACGSTGWVSSIIG-VHNWHLALFSQQAQEDVWGN---DTDVRISSSYAP 122 (394)
T ss_dssp HTGGGTTSCGGGTCCCCCHHHHHHHHHHHHTTCHHHHHHHHHHH-HHHHHHTTSCHHHHHHHHSS---CTTCCEEEECSC
T ss_pred CCCceecCchhhCCCCCCHHHHHHHHHHHHhhChhHHHHHHHHH-HHHHHHHhCCHHHHHHHhCC---CCCeEEEeccCC
Confidence 48999999999999999999999999999999988876655443 56667788999999999988 5654 3555542
Q ss_pred C------CCCCCcc---------HHHHHHHHHHHHhhC--C---Cc-eeEeeechhhhHHHHHhcCCH--HHhhhhchhc
Q psy5139 81 E------YGGPGLS---------FMTDILIVEEIARVD--P---SV-SILVDIQNTLVNDLIIKLGTT--EQKEKYLPRL 137 (216)
Q Consensus 81 ~------~gG~~~~---------~~~~~~v~e~lar~~--~---~~-~~~v~~~~~~~~~~~~~~g~~--~~~~~~l~~~ 137 (216)
. .+|.-++ ...+.+++ +++++ + .+ .|+|+.+...+.....++|.+ ...+..|+++
T Consensus 123 ~t~A~~~~~g~~lnG~K~~is~a~~Ad~~~v--~a~~~~~g~~~~~~~flV~~~gv~v~~~~~~~G~~~~~~~~v~fd~v 200 (394)
T 2rfq_A 123 MGAGQVVDGGYTVNGAWAWSSGCDHASWAVL--GGPVIKDGRPVDFVSFLIPREDYRIDDVWNVVGLRGTGSNTVVVEDV 200 (394)
T ss_dssp SEEEEEETTEEEEEEEEEEETTGGGCSEEEE--EEEEEETTEEEEEEEEEEEGGGCEEECCCCBSSCGGGCCEEEEEEEE
T ss_pred CceEEEeCCeEEEeeeEeccCCCcccceEEE--eeeecCCCCCCceeEEEEEhhhcEEeCCccccccccCCCCceEEcce
Confidence 1 1111110 11233333 56652 2 23 377776532222223445644 3455677765
Q ss_pred ---ccccccc--------cc----cchhhhhhhhccccCCceeeccceeeeecCcccCCCcceeeeee---------c--
Q psy5139 138 ---AQTDVSR--------TS----RGYKALEWHAFYGRTDSLPLNDHLSHISSGCVGFDGQLKRWMVS---------C-- 191 (216)
Q Consensus 138 ---~~~~lg~--------~~----~g~~~~~~~~~~~~~~~~~l~g~k~~va~~~~g~~~~~~~~~~~---------~-- 191 (216)
.+++++. ++ .|+......+...| ..+++..+|. ++.+++ .
T Consensus 201 ~Vp~~~~lg~~~~~~g~~~g~~~~~g~~~~~~~~~~~r----------~~~aa~~~G~----a~~al~~a~~ya~~R~~~ 266 (394)
T 2rfq_A 201 FVPTHRVLSFKAMSNLTAPGLERNTAPVYKMPWGTIHP----------TTISAPIVGM----AYGAYDAHVEHQGKRVRA 266 (394)
T ss_dssp EEEGGGEEEHHHHHTTCCGGGTTCCCGGGGSCHHHHHH----------HHHHHHHHHH----HHHHHHHHHHHHHHHHHH
T ss_pred EcChHHhcccccccccCCCCcccCCCccccccHHHHHH----------HHHHHHHHHH----HHHHHHHHHHHhccCCcC
Confidence 4566654 22 22333333333444 7778888888 555542 2
Q ss_pred -cccceeeeeeccc---ccccccccccC
Q psy5139 192 -GLSLQILQFQNLS---SDMHMTGLASR 215 (216)
Q Consensus 192 -~fg~~i~~~Q~v~---ad~~~~~~~~r 215 (216)
+||+||++||.|| +||.++++++|
T Consensus 267 ~~fG~~i~~~q~vq~~la~~~~~~~aar 294 (394)
T 2rfq_A 267 AFAGEKAKDDPFAKVRIAEASSDIDAAW 294 (394)
T ss_dssp SCTTCGGGSCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcccccCHHHHHHHHHHHHHHHHHH
Confidence 8999999999999 99999999876
No 34
>2or0_A Hydroxylase; APC7385, rhodococcus SP. RHA1, structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; HET: MSE; 2.10A {Rhodococcus SP}
Probab=99.58 E-value=4.1e-19 Score=144.56 Aligned_cols=194 Identities=14% Similarity=0.056 Sum_probs=128.4
Q ss_pred CccccccCCCCCCCCCCCHHHHHHHHHHHHccCCChhHHHHHHHhhHHHHHHhcCChhHHHHHHHHHHhCCc-eeeecCC
Q psy5139 2 TTLLGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEKYLPRLAQTDL-MGVEIPQ 80 (216)
Q Consensus 2 ~G~~~~~~p~~~GG~g~~~~~~~~~~ee~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~l~~g~~-~~~~~~e 80 (216)
.||+++.+|++|||.|+++.+.+.+.||+++.+.+++..+..+. +....+..+++++|+++|++ +++. .+.++++
T Consensus 60 ~Gl~~l~~P~e~GG~g~~~~~~~~v~eela~~~~~~~~~~~~~~-~~~~~l~~~g~~~q~~~~l~---~g~~~~a~a~tp 135 (414)
T 2or0_A 60 SGAIRLLQPRLYGGYEVHPREFAETVMGVAALDGASGWVTGIVG-VHPWELAFADPQVQEEIWGE---DNDTWMASPYAP 135 (414)
T ss_dssp HTGGGTTSCGGGTCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHT-THHHHHTTSCHHHHHHHHSS---CTTCCEECCCSC
T ss_pred CCCchhcCchhhCCCCCCHHHHHHHHHHHHhhChHHHHHHHHHH-HHHHHHHhCCHHHHHHHHcc---CCCeEEEeccCC
Confidence 48999999999999999999999999999999988876555443 56677889999999999998 5664 3455441
Q ss_pred C------CCCCCcc---------HHHHHHHHHHHHhhC---C-----Cc-eeEeeechhhhH-HHHHhcCCH--HHhhhh
Q psy5139 81 E------YGGPGLS---------FMTDILIVEEIARVD---P-----SV-SILVDIQNTLVN-DLIIKLGTT--EQKEKY 133 (216)
Q Consensus 81 ~------~gG~~~~---------~~~~~~v~e~lar~~---~-----~~-~~~v~~~~~~~~-~~~~~~g~~--~~~~~~ 133 (216)
. .+|.-++ ...+.+++ +++++ . ++ .|+|+.+...+. ....++|.+ ...+.+
T Consensus 136 ~t~A~~~~~g~~lnG~K~~is~a~~Ad~~~v--~a~~~~~~g~~~~~g~~~flV~~~gv~v~~~~~~~~G~r~~~~~~v~ 213 (414)
T 2or0_A 136 MGVATPVDGGYVLKGRWSFSSGTDHCQWAFL--GAMVGDGEGGIATPSSLHVILPRTDYQIVEDTWDVIGLRGTGSKDLI 213 (414)
T ss_dssp CEEEEEETTEEEEEEEEEEETTGGGCSEEEE--EEEECC-----CCCSEEEEEEEGGGCEEETTCCCBSSCGGGCCEEEE
T ss_pred CceeEEECCeEEEEeeEeccCCCchhhEEEE--EEEecCCCCCcccceeEEEEEEhhhcEEecCCCccccCcccCCCcEE
Confidence 1 1111110 11233333 55553 1 33 377877532222 234455644 345567
Q ss_pred chhc---ccccccc--------cc----cchhhhhhhhccccCCceeeccceeeeecCcccCCCcceeeeeec-------
Q psy5139 134 LPRL---AQTDVSR--------TS----RGYKALEWHAFYGRTDSLPLNDHLSHISSGCVGFDGQLKRWMVSC------- 191 (216)
Q Consensus 134 l~~~---~~~~lg~--------~~----~g~~~~~~~~~~~~~~~~~l~g~k~~va~~~~g~~~~~~~~~~~~------- 191 (216)
|+++ .+++++. ++ .|+......+...| ..+++..+|. ++.+++.
T Consensus 214 fd~v~VP~~~~lg~~~~~~g~~~g~~~~~g~~~~~~~~~~~r----------~~~aa~~lG~----a~~al~~a~~ya~~ 279 (414)
T 2or0_A 214 VDGAFVPGYRTLNAAKVMDGRAQKEAGRPEPLFNMPYSCMFP----------LGITAAVIGI----TEGALACHIAVQKD 279 (414)
T ss_dssp EEEEEEEGGGEEEHHHHHHSHHHHHHTCSCSGGGSCHHHHHH----------HHHHHHHHHH----HHHHHHHHHHHHTT
T ss_pred EccEEecHHHeeccccccccCCCccccCCCccccccHHHHHH----------HHHHHHHHHH----HHHHHHHHHHHHhc
Confidence 7775 4566764 22 23333333344444 7778888888 5555533
Q ss_pred --cc-cceeeeeeccc---ccccccccccC
Q psy5139 192 --GL-SLQILQFQNLS---SDMHMTGLASR 215 (216)
Q Consensus 192 --~f-g~~i~~~Q~v~---ad~~~~~~~~r 215 (216)
+| |+||++||.|| +||.+.++++|
T Consensus 280 R~~f~G~~i~~~q~vq~~la~~~~~~~aar 309 (414)
T 2or0_A 280 RVAITGQKIKEDPYVLSAIGESAAEINASR 309 (414)
T ss_dssp CBCTTSCBGGGCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCccccCHHHHHHHHHHHHHHHHHH
Confidence 48 99999999999 99999999876
No 35
>3djl_A Protein AIDB; alpha helix, beta-barrel, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.70A {Escherichia coli} PDB: 3u33_A*
Probab=99.53 E-value=9.7e-18 Score=140.09 Aligned_cols=192 Identities=14% Similarity=0.098 Sum_probs=136.6
Q ss_pred CccccccC--CCCCCCCCCCHHHHHHHHHHHHccCCChhHHHHHHHhhHHHHHHhcCChhHHHHHHHHHHhCCc------
Q psy5139 2 TTLLGVEI--PQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEKYLPRLAQTDL------ 73 (216)
Q Consensus 2 ~G~~~~~~--p~~~GG~g~~~~~~~~~~ee~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~l~~g~~------ 73 (216)
.||+++.+ |++|||.+.......++.++.+ ........+. .+.+.|..++ ++|+++|+|++.++++
T Consensus 98 ~Gl~~l~~~~p~~~Gg~~~~~~~~~~~~~~~~----~~~~p~~~t~-~~~~~L~~~g-~eqk~~~lp~l~sge~~p~~~~ 171 (541)
T 3djl_A 98 NRVHNLAWEEDARSGAFVARAARFMLHAQVEA----GSLCPITMTF-AATPLLLQML-PAPFQDWTTPLLSDRYDSHLLP 171 (541)
T ss_dssp TTTTTGGGSTTCCTTHHHHHHHHHHHHHHHCS----TTHHHHHHHH-HHHHHHHHHC-CGGGGGGHHHHTCSCCCCCSSC
T ss_pred CCcccCCCCCCCCCCcHHHHHHHHHHHHHHHH----hhhcHHHHHH-HHHHHHHHcC-HHHHHHHHHHHhCCCccccccc
Confidence 48999999 7999976555444444444322 2222222233 4566788899 9999999999999986
Q ss_pred --------eeeecCCCCCCCCccHHH-------------------------HHHHHHHHHhhCCCce-eEeeechh----
Q psy5139 74 --------MGVEIPQEYGGPGLSFMT-------------------------DILIVEEIARVDPSVS-ILVDIQNT---- 115 (216)
Q Consensus 74 --------~~~~~~e~~gG~~~~~~~-------------------------~~~v~e~lar~~~~~~-~~v~~~~~---- 115 (216)
.+++++|+.+|||+..+. +.+++ ++|++.+++ |+|+.+.+
T Consensus 172 ~~~~~g~~~~~a~TEp~~GSDl~~~~T~A~~~~~g~y~LnG~K~f~Sa~~Ad~~lV--lArt~~Gis~flVp~~~p~~~~ 249 (541)
T 3djl_A 172 GGQKRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLV--LAQTAGGLSCFFVPRFLPDGQR 249 (541)
T ss_dssp GGGSSSCCEEEECCBTTBSSCGGGCCCEEEECTTSCEEEEEEEEEEECTTSSEEEE--EEEETTEEEEEEEESBCTTSCB
T ss_pred ccccccceeEEEeccCCcCCCcccceeEEEEcCCCeEEEEEEEEeecccccCEEEE--EEEECCceEEEEEecCCCCCCc
Confidence 588999999999864211 23333 566655554 67776532
Q ss_pred --h-hHHHHHhcCCH--HHhhhhchhcccccccccccchhhhhhhhccccCCceeeccceeeeecCcccCCCcceeeeee
Q psy5139 116 --L-VNDLIIKLGTT--EQKEKYLPRLAQTDVSRTSRGYKALEWHAFYGRTDSLPLNDHLSHISSGCVGFDGQLKRWMVS 190 (216)
Q Consensus 116 --~-~~~~~~~~g~~--~~~~~~l~~~~~~~lg~~~~g~~~~~~~~~~~~~~~~~l~g~k~~va~~~~g~~~~~~~~~~~ 190 (216)
+ +.....++|.+ ...+.+|+++.++++|+++.|++.+...++..| ..+++..+|. ++.+++
T Consensus 250 ~Gv~i~~~~~~~G~rgt~s~~v~fddv~~~llG~~g~G~~~~~~~l~~~R----------l~~aa~~~G~----a~~al~ 315 (541)
T 3djl_A 250 NAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGLEGEGIRLILKMGGMTR----------FDCALGSHAM----MRRAFS 315 (541)
T ss_dssp CSEEEEEECCCSSCTTSCEEEEEEEEEEEEEESSTTCHHHHTHHHHHHHH----------HHHHHHHHHH----HHHHHH
T ss_pred CCeEEeeccccCCCcCCceeEEEEccceeeeeecCCchHHHHHHHHHHHH----------HHHHHHHHHH----HHHHHH
Confidence 1 22233456765 456788999888899999999998888877777 8888888888 555553
Q ss_pred c---------cccceeeeeeccc---ccccccccccC
Q psy5139 191 C---------GLSLQILQFQNLS---SDMHMTGLASR 215 (216)
Q Consensus 191 ~---------~fg~~i~~~Q~v~---ad~~~~~~~~r 215 (216)
. +||+||.+||.|| +||.++++++|
T Consensus 316 ~a~~ya~~R~~fG~~i~~~p~vq~~La~~~~~~eaar 352 (541)
T 3djl_A 316 LAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQT 352 (541)
T ss_dssp HHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhCccCCCchhhCHHHHHHHHHHHHHHHHHH
Confidence 3 4999999999999 99999998876
No 36
>2jif_A Short/branched chain specific acyl-COA dehydrogen; mitochondrion, oxidoreductase, transit peptide, fatty acid metabolism, FAD, flavoprotein; HET: FAD COS; 2.0A {Homo sapiens}
Probab=99.40 E-value=1.7e-13 Score=111.11 Aligned_cols=121 Identities=40% Similarity=0.594 Sum_probs=96.4
Q ss_pred HHHHHHHHHHhCCceeeecCCCCCCCCccHHHHHHHHHHHHhhCCCceeEeeechhhhHHHHHhcCCHHHhhhhchhccc
Q psy5139 60 QKEKYLPRLAQTDLMGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEKYLPRLAQ 139 (216)
Q Consensus 60 ~~~~~l~~l~~g~~~~~~~~e~~gG~~~~~~~~~~v~e~lar~~~~~~~~v~~~~~~~~~~~~~~g~~~~~~~~l~~~~~ 139 (216)
.+.++++.+.+.|++++.+||++||.+.+..+...+.|++++.+.++++++..+.......+..+|+++|++.|++.+.+
T Consensus 61 ~~~~~~~~l~e~Gl~~l~~P~e~GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~l~~~g~~~qk~~~l~~~~~ 140 (404)
T 2jif_A 61 MEKSVIQGLFQQGLMGIEVDPEYGGTGASFLSTVLVIEELAKVDASVAVFCEIQNTLINTLIRKHGTEEQKATYLPQLTT 140 (404)
T ss_dssp CCHHHHHHHHHTTTTSSSSCGGGTCCCCCHHHHHHHHHHHHTTCHHHHHHHHHHHHTHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHCCCCccCCchhhCCCCCCHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 45679999999999999999999999999999999999999988776554433333445677789999999999998766
Q ss_pred ccc-----cccccchhhhhhhhcccc-CCceeeccceeeeecCcccC
Q psy5139 140 TDV-----SRTSRGYKALEWHAFYGR-TDSLPLNDHLSHISSGCVGF 180 (216)
Q Consensus 140 ~~l-----g~~~~g~~~~~~~~~~~~-~~~~~l~g~k~~va~~~~g~ 180 (216)
+.+ .+++.|++......+..+ +++|+|||+|.|++++..++
T Consensus 141 g~~~~~a~tEp~~Gsd~~~~~t~A~~~g~g~vlnG~K~~is~a~~Ad 187 (404)
T 2jif_A 141 EKVGSFCLSEAGAGSDSFALKTRADKEGDYYVLNGSKMWISSAEHAG 187 (404)
T ss_dssp TCCEEEECCBTTBSSSGGGCCCEEEEETTEEEEEEEEEEEETTTTCS
T ss_pred CCcceEEecCCCCCCChhhceeEEEEeCCEEEEEeEEEeecCCcccC
Confidence 543 466777765444444445 88999999999999988765
No 37
>2d29_A Acyl-COA dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; HET: FAD; 1.65A {Thermus thermophilus} SCOP: a.29.3.1 e.6.1.1 PDB: 1ws9_A 2cx9_A*
Probab=99.39 E-value=1.8e-13 Score=110.31 Aligned_cols=122 Identities=28% Similarity=0.403 Sum_probs=97.2
Q ss_pred hHHHHHHHHHHhCCceeeecCCCCCCCCccHHHHHHHHHHHHhhCCCceeEeeechhhhHHHHHhcCCHHHhhhhchhcc
Q psy5139 59 EQKEKYLPRLAQTDLMGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEKYLPRLA 138 (216)
Q Consensus 59 ~~~~~~l~~l~~g~~~~~~~~e~~gG~~~~~~~~~~v~e~lar~~~~~~~~v~~~~~~~~~~~~~~g~~~~~~~~l~~~~ 138 (216)
..+.++++.+.+.|++++.+||++||.+.+..+...+.|++++.+.++.+.+..+.......+..+|+++|++.|++.+.
T Consensus 38 ~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~ 117 (387)
T 2d29_A 38 AFPWDLVRKLAEFGVFGALVPEAYGGAGLSTRLFARMVEAIAYYDGALALTVASHNSLATGHILLAGSEAQKEAFLPKLA 117 (387)
T ss_dssp CCCHHHHHHHHTTTGGGSSSCGGGTCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHTHHHHHHHHCCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHCCCCCCCCChhhCCCCCCHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 35668999999999999999999999999999999999999999887655443332345567788999999999999876
Q ss_pred ccc------ccccccchhhhhhhhcccc-CCceeeccceeeeecCcccC
Q psy5139 139 QTD------VSRTSRGYKALEWHAFYGR-TDSLPLNDHLSHISSGCVGF 180 (216)
Q Consensus 139 ~~~------lg~~~~g~~~~~~~~~~~~-~~~~~l~g~k~~va~~~~g~ 180 (216)
++. +.+++.|++......+..+ +++|+|||+|.|++++..++
T Consensus 118 ~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad 166 (387)
T 2d29_A 118 SGEALGAWGLTEPGSGSDAAALKTKAEKVEGGWRLNGTKQFITQGSVAG 166 (387)
T ss_dssp TSSSCEEEECCBTTBSSSGGGCCCEEEEETTEEEEEEEEEEEETTTTCS
T ss_pred CCCceEEEEeCCCCCCCCHhhCceEEEEeCCEEEEEeEEeccCCCCcCC
Confidence 653 3467777776544445555 88999999999999987654
No 38
>3p4t_A Putative acyl-COA dehydrogenase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: FAO; 1.70A {Mycobacterium smegmatis} PDB: 3oib_A*
Probab=99.39 E-value=2.2e-13 Score=110.39 Aligned_cols=122 Identities=16% Similarity=0.193 Sum_probs=98.1
Q ss_pred hHHHHHHHHHHhCCceeeecCCCCCCCCccHHHHHHHHHHHHhhCCCc-eeEeeechhhhHHHHHhcCCHHHhhhhchhc
Q psy5139 59 EQKEKYLPRLAQTDLMGVEIPQEYGGPGLSFMTDILIVEEIARVDPSV-SILVDIQNTLVNDLIIKLGTTEQKEKYLPRL 137 (216)
Q Consensus 59 ~~~~~~l~~l~~g~~~~~~~~e~~gG~~~~~~~~~~v~e~lar~~~~~-~~~v~~~~~~~~~~~~~~g~~~~~~~~l~~~ 137 (216)
..+.++++.+.+.|++++.+||++||.+.+..+...+.|++++.+.++ ++....+.......+..+|+++|++.|++.+
T Consensus 57 ~~~~~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~ 136 (403)
T 3p4t_A 57 EIPRELHRKAAELGLLGAGFPEDAGGSGGDGADPVVICEEMHYAGSPGGVYASLFTCGIAVPHMIASGDQRLIDTYVRPT 136 (403)
T ss_dssp SCCHHHHHHHHHTTCTTBTSCGGGTCCBCCTHHHHHHHHHHHHTTCCHHHHHHHSTHHHHSHHHHHHTCHHHHHHTHHHH
T ss_pred CCCHHHHHHHHHCCCCcCCCChhhCCCCCCHHHHHHHHHHHHHhCCchhhhHHHhhhhhHHHHHHHhCCHHHHHHHHHHH
Confidence 356789999999999999999999999999999999999999999886 4433333334456678899999999999987
Q ss_pred cccc------ccccccchhhhhhhhcccc-CCceeeccceeeeecCcccC
Q psy5139 138 AQTD------VSRTSRGYKALEWHAFYGR-TDSLPLNDHLSHISSGCVGF 180 (216)
Q Consensus 138 ~~~~------lg~~~~g~~~~~~~~~~~~-~~~~~l~g~k~~va~~~~g~ 180 (216)
.++. +.+++.|++......+..+ +++|+|||+|.|++++..++
T Consensus 137 ~~G~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~vs~a~~Ad 186 (403)
T 3p4t_A 137 LRGEKIGALAITEPGGGSDVGHLRTRADLDGDHYVINGAKTYITSGVRAD 186 (403)
T ss_dssp HTTSSCEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEEETTTTCS
T ss_pred hCCCeEEEEEecCCCCCCCcccceEEEEEeCCEEEEEEEEEEecCCcccC
Confidence 6653 3467777776555555555 88999999999999988765
No 39
>2dvl_A Acyl-COA dehydrogenase; structural genomics, NPPSFA, national project on protein STR and functional analyses; HET: FAD; 2.50A {Thermus thermophilus}
Probab=99.38 E-value=2.2e-13 Score=109.27 Aligned_cols=122 Identities=32% Similarity=0.467 Sum_probs=97.1
Q ss_pred hHHHHHHHHHHhCCceeeecCCCCCCCCccHHHHHHHHHHHHhhCCCceeEeeechhhhHHHHHhcCCHHHhhhhchhcc
Q psy5139 59 EQKEKYLPRLAQTDLMGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEKYLPRLA 138 (216)
Q Consensus 59 ~~~~~~l~~l~~g~~~~~~~~e~~gG~~~~~~~~~~v~e~lar~~~~~~~~v~~~~~~~~~~~~~~g~~~~~~~~l~~~~ 138 (216)
..+.++++.+.+.|++++.+||++||.+.+..+...+.|++++.+.++.+.+..+.......+..+|+++|++.|++.+.
T Consensus 34 ~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~ 113 (372)
T 2dvl_A 34 EYPWPQLKALAELGLLGMTTPEEWGGVGLDSVTWALALEELAAADPSVAVIVSVTSGLPQYMLLRFGSEAQKRRYLVPLA 113 (372)
T ss_dssp CCCHHHHHHHHHTTGGGTTSCGGGTSCCCCHHHHHHHHHHHHHHCHHHHHHHHHHTSHHHHHHHHHCCHHHHHHTHHHHH
T ss_pred CCCHHHHHHHHhCCCCCCCCChhhCCCCCCHHHHHHHHHHHHhcCcHHHHHHHHhhhHHHHHHHHhCCHHHHHHHHHHHh
Confidence 45678999999999999999999999999999999999999999887654443332244566788999999999999876
Q ss_pred ccc------ccccccchhhhhhhhcccc-CCceeeccceeeeecCcccC
Q psy5139 139 QTD------VSRTSRGYKALEWHAFYGR-TDSLPLNDHLSHISSGCVGF 180 (216)
Q Consensus 139 ~~~------lg~~~~g~~~~~~~~~~~~-~~~~~l~g~k~~va~~~~g~ 180 (216)
++. +.+++.|++......+..+ +++|+|||+|.|++++..++
T Consensus 114 ~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad 162 (372)
T 2dvl_A 114 RGEWIGAFCLTEPQAGSDAKSLRAEARRVKGGFVLNGVKSWITSAGHAH 162 (372)
T ss_dssp TTSSCEEEECCCSSCSSCGGGCCCEEEEETTEEEEEEEEEEEETTTTCS
T ss_pred CCCeEEEEEecCCCCCCChhhCeeEEEEECCEEEEEeEEEeecCCCcCC
Confidence 653 3467777776544445555 88999999999999988755
No 40
>1ukw_A Acyl-COA dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: FAD; 2.40A {Thermus thermophilus} SCOP: a.29.3.1 e.6.1.1
Probab=99.37 E-value=2.5e-13 Score=109.25 Aligned_cols=121 Identities=27% Similarity=0.351 Sum_probs=96.2
Q ss_pred hHHHHHHHHHHhCCceeeecCCCCCCCCccHHHHHHHHHHHHhhCCCceeEeeechhhhHHHHHhcCCHHHhhhhchhcc
Q psy5139 59 EQKEKYLPRLAQTDLMGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEKYLPRLA 138 (216)
Q Consensus 59 ~~~~~~l~~l~~g~~~~~~~~e~~gG~~~~~~~~~~v~e~lar~~~~~~~~v~~~~~~~~~~~~~~g~~~~~~~~l~~~~ 138 (216)
..+.++++.+.+.|++++.+||++||.+.+..+...+.|++++.+.++.+.+..+ ......+..+|+++|++.|++.+.
T Consensus 36 ~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~~~eel~~~~~~~~~~~~~~-~~~~~~l~~~g~~~q~~~~l~~~~ 114 (379)
T 1ukw_A 36 EVPWPVIEKLHEVGLLNAIIPEEYGGMGLKMLDEVIVGEELAYACMGIYTIPMAS-DLGITPVLLAGTEEQKERFLRPLT 114 (379)
T ss_dssp CCCHHHHHHHHHTTCTTTTSCGGGTSCCCCHHHHHHHHHHHHHHCHHHHHHHHHH-HHHHHHHHHHCCHHHHHHHHGGGT
T ss_pred CCCHHHHHHHHHCCCCCcCCChhhCCCCCCHHHHHHHHHHHHHhCchHHHHHHHH-HHHHHHHHHhCCHHHHHHHHHHHh
Confidence 3567899999999999999999999999999999999999999988765443333 344566788999999999999887
Q ss_pred ccc------ccccccchhhhhhhhcccc-CCceeeccceeeeecCcccC
Q psy5139 139 QTD------VSRTSRGYKALEWHAFYGR-TDSLPLNDHLSHISSGCVGF 180 (216)
Q Consensus 139 ~~~------lg~~~~g~~~~~~~~~~~~-~~~~~l~g~k~~va~~~~g~ 180 (216)
++. +.+++.|++......+..+ +++|+|||+|.|++++..++
T Consensus 115 ~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad 163 (379)
T 1ukw_A 115 EKPALAAFALSEPGNGSDAAALKTRAIRQGDHYVLNGTKMWISNGGEAE 163 (379)
T ss_dssp SSSCEEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEEETTTTEE
T ss_pred CCCceEEEEecCCCCCcChhhCeEEEEEeCCEEEEEEEEecccCCCcCC
Confidence 653 3466677765444444555 88999999999999987654
No 41
>3ii9_A Glutaryl-COA dehydrogenase; slipchip, microfluidics, screening, optimization, protein crystallization, structural genomics; HET: PGE PG4; 1.74A {Burkholderia pseudomallei 1710B} PDB: 3eon_A* 3eom_A* 3gqt_A* 3gnc_A* 3d6b_A
Probab=99.37 E-value=1.3e-13 Score=111.42 Aligned_cols=122 Identities=27% Similarity=0.479 Sum_probs=92.9
Q ss_pred hHHHHHHHHHHhCCceeeecCCCCCCCCccHHHHHHHHHHHHhhCCCceeEeeechhhhHHHHHhcCCHHHhhhhchhcc
Q psy5139 59 EQKEKYLPRLAQTDLMGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEKYLPRLA 138 (216)
Q Consensus 59 ~~~~~~l~~l~~g~~~~~~~~e~~gG~~~~~~~~~~v~e~lar~~~~~~~~v~~~~~~~~~~~~~~g~~~~~~~~l~~~~ 138 (216)
..+.++++.+.+.|++++.+||++||.+.+..+...+.|++++.+.++.+.+..+.......+..+|+++|++.|++.+.
T Consensus 50 ~~~~~~~~~l~~~Gl~~l~~P~~~GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~ 129 (396)
T 3ii9_A 50 TTDAAIFREMGEIGLLGPTIPEQYGGPGLDYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIFEFGSDAQKEKYLPKLA 129 (396)
T ss_dssp CCCTHHHHHHHHTTCSSTTSCGGGTSCCCCHHHHHHHHHHHHTTCHHHHHHHHCCCCCCCHHHHHHSCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHhCCCCCCCCChhhCCCCCCHHHHHHHHHHHHHhChhHHHHHHhhhhhHHHHHHHhCCHHHHHHHHHHHh
Confidence 45678999999999999999999999999999999999999999877554333333334456788999999999999886
Q ss_pred ccc------ccccccchhhhhhhhcccc-CCceeeccceeeeecCcccC
Q psy5139 139 QTD------VSRTSRGYKALEWHAFYGR-TDSLPLNDHLSHISSGCVGF 180 (216)
Q Consensus 139 ~~~------lg~~~~g~~~~~~~~~~~~-~~~~~l~g~k~~va~~~~g~ 180 (216)
++. +.+++.|++......+..+ +++|+|||+|.|++++..++
T Consensus 130 ~G~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~vs~a~~Ad 178 (396)
T 3ii9_A 130 TGEWIGCFGLTEPNHGSDPGSMVTRARKVPGGYSLSGSKMWITNSPIAD 178 (396)
T ss_dssp HTSSCEEEECCCCC------CCCCEEEEETTEEEEEEEEEEEETGGGCS
T ss_pred CCCeeeEEEecCCCCCCChhhCeeEEEEeCCEEEEEEEEEeECCCccCC
Confidence 653 3567778776544445555 88999999999999988765
No 42
>2vig_A Short-chain specific acyl-COA dehydrogenase,; fatty acid metabolism, FAD, polymorphism, flavoprotein, mitochondrion, disease mutation; HET: FAD COS; 1.9A {Homo sapiens} PDB: 1jqi_A*
Probab=99.37 E-value=2.8e-13 Score=109.35 Aligned_cols=122 Identities=24% Similarity=0.379 Sum_probs=97.1
Q ss_pred hHHHHHHHHHHhCCceeeecCCCCCCCCccHHHHHHHHHHHHhhCCCceeEeeechhhhHHHHHhcCCHHHhhhhchhcc
Q psy5139 59 EQKEKYLPRLAQTDLMGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEKYLPRLA 138 (216)
Q Consensus 59 ~~~~~~l~~l~~g~~~~~~~~e~~gG~~~~~~~~~~v~e~lar~~~~~~~~v~~~~~~~~~~~~~~g~~~~~~~~l~~~~ 138 (216)
..+.++++.+.+.|++++.+||++||.+.+..+...+.|++++.+.++.+++..+.......+..+|+++|++.|++.+.
T Consensus 37 ~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~ 116 (391)
T 2vig_A 37 LFPAAQVKKMGGLGLLAMDVPEELGGAGLDYLAYAIAMEEISRGCASTGVIMSVNNSLYLGPILKFGSKEQKQAWVTPFT 116 (391)
T ss_dssp CCCHHHHHHHHHHTTTSTTSCGGGTSCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHTTHHHHHHHCCHHHHHHHTGGGS
T ss_pred CCCHHHHHHHHHCCCCCCCCCHhhCCCCCCHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 35668999999999999999999999999999999999999999887654443332244566788999999999999886
Q ss_pred ccc------ccccccchhhhhhhhcccc-CCceeeccceeeeecCcccC
Q psy5139 139 QTD------VSRTSRGYKALEWHAFYGR-TDSLPLNDHLSHISSGCVGF 180 (216)
Q Consensus 139 ~~~------lg~~~~g~~~~~~~~~~~~-~~~~~l~g~k~~va~~~~g~ 180 (216)
++. +.+++.|++......+..+ +++|+|||+|.|++++..++
T Consensus 117 ~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad 165 (391)
T 2vig_A 117 SGDKIGCFALSEPGNGSDAGAASTTARAEGDSWVLNGTKAWITNAWEAS 165 (391)
T ss_dssp SSSCCEEEECCBTTBSSSGGGCCCEEEEETTEEEEEEEEEEEETTTTCS
T ss_pred CCCceEEEEecCCCCCCCcccceeEEEEeCCEEEEeeEEEeecCCCcCC
Confidence 653 2567777766544445555 88999999999999987654
No 43
>3pfd_A Acyl-COA dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: FDA; 2.10A {Mycobacterium thermoresistibile}
Probab=99.36 E-value=2.5e-13 Score=109.77 Aligned_cols=122 Identities=27% Similarity=0.387 Sum_probs=97.5
Q ss_pred hhHHHHHHHHHHhCCceeeecCCCCCCCCccHHHHHHHHHHHHhhCCCceeEeeechhhhHHHHHhcCCHHHhhhhchhc
Q psy5139 58 TEQKEKYLPRLAQTDLMGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEKYLPRL 137 (216)
Q Consensus 58 ~~~~~~~l~~l~~g~~~~~~~~e~~gG~~~~~~~~~~v~e~lar~~~~~~~~v~~~~~~~~~~~~~~g~~~~~~~~l~~~ 137 (216)
...+.++++.+.+.|++++.+||++||.+.+..+...+.|++++.+.++.+++..+ ......+..+|+++|++.|++.+
T Consensus 49 ~~~~~~~~~~l~~~G~~~~~~P~~~GG~g~~~~~~~~v~eela~~~~~~~~~~~~~-~~~~~~l~~~g~~~q~~~~l~~~ 127 (393)
T 3pfd_A 49 ARFPEEALAALNSSGFSAIHVPEEYGGQGADSVATCIVIEEVARVDCSASLIPAVN-KLGTMGLILRGSEELKKQVLPAV 127 (393)
T ss_dssp TCCCHHHHHHHHHHTCSCTTSCGGGTCCCCCHHHHHHHHHHHHTTCHHHHHHHHHH-HHTTHHHHHHCCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHCCCCCCCCChhHCCCCCCHHHHHHHHHHHHhhCchHHHHHHHH-HHHHHHHHHhCCHHHHHHHHHHH
Confidence 34667899999999999999999999999999999999999999988765533222 23345577889999999999988
Q ss_pred cccc------ccccccchhhhhhhhcccc-CCceeeccceeeeecCcccC
Q psy5139 138 AQTD------VSRTSRGYKALEWHAFYGR-TDSLPLNDHLSHISSGCVGF 180 (216)
Q Consensus 138 ~~~~------lg~~~~g~~~~~~~~~~~~-~~~~~l~g~k~~va~~~~g~ 180 (216)
.++. +.+++.|++......+..+ +++|+|||+|.|++++..++
T Consensus 128 ~~G~~~~~~a~tEp~~gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad 177 (393)
T 3pfd_A 128 ASGEAMASYALSEREAGSDAASMRTRAVADGDDWILNGSKCWITNGGKST 177 (393)
T ss_dssp HTTSCCEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEEETTTTCS
T ss_pred hCCCceeEEEEcCCCCCCCcccCeeEEEEcCCEEEEeeEEEEecCCcccC
Confidence 6653 3567777776555555555 88999999999999988755
No 44
>2eba_A Putative glutaryl-COA dehydrogenase; thermus thermophilius, FAD, STRU genomics, NPPSFA; HET: FAD; 2.21A {Thermus thermophilus}
Probab=99.36 E-value=1.8e-13 Score=110.21 Aligned_cols=122 Identities=30% Similarity=0.476 Sum_probs=95.5
Q ss_pred hHHHHHHHHHHhCCceeeecCCCCCCCCccHHHHHHHHHHHHhhCCCceeEeeechhhhHHHHHhcCCHHHhhhhchhcc
Q psy5139 59 EQKEKYLPRLAQTDLMGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEKYLPRLA 138 (216)
Q Consensus 59 ~~~~~~l~~l~~g~~~~~~~~e~~gG~~~~~~~~~~v~e~lar~~~~~~~~v~~~~~~~~~~~~~~g~~~~~~~~l~~~~ 138 (216)
..+.++++.+.+.|++++.+||++||.+.+..+...+.|++++.+.++.+.+..+.......+..+|+++|++.|++.+.
T Consensus 42 ~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eela~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~ 121 (385)
T 2eba_A 42 VFPTHLIPRFAELGFLGPTLPPEYGGAGVSSAAYGLICYELERVDSGLRSFVSVQSSLVMYPIYAYGSEEQKREFLPKLA 121 (385)
T ss_dssp CCCGGGHHHHHHHTCSSTTSCGGGTCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHTTHHHHHHHSCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHCCCcCCCCchhhCCCCCCHHHHHHHHHHHHHhCchHHHHHHHHHhHHHHHHHHhCCHHHHHHHHHHHh
Confidence 45677899999999999999999999999999999999999999887665443333344566778999999999999886
Q ss_pred ccc------ccccccchhh-hhhhhcccc-CCceeeccceeeeecCcccC
Q psy5139 139 QTD------VSRTSRGYKA-LEWHAFYGR-TDSLPLNDHLSHISSGCVGF 180 (216)
Q Consensus 139 ~~~------lg~~~~g~~~-~~~~~~~~~-~~~~~l~g~k~~va~~~~g~ 180 (216)
++. +.+++.|++. .....+..+ +++|+|||+|.|++++..++
T Consensus 122 ~g~~~~~~a~tEp~~Gsd~~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad 171 (385)
T 2eba_A 122 RGEMVGCFGLTEPDGGSDPYGNMKTRARREGDTWVLNGTKMWITNGNLAH 171 (385)
T ss_dssp TTSSCEEEECCCTTCTTSTTTTCCCEEEC--CEEEEEEEEEEEETTTTCS
T ss_pred CCCeEEEEEeCCCCcCCCccccCeeEEEEeCCEEEEEeeeeccCCCcccC
Confidence 653 2466777665 333344445 78999999999999987654
No 45
>1r2j_A Protein FKBI; polyketide synthase, polyketide, acyl-COA dehydrogenase, , aldehyde dehydrogenase, oxidoreductase; HET: FAD; 2.10A {Streptomyces hygroscopicus} SCOP: a.29.3.1 e.6.1.1
Probab=99.36 E-value=3.3e-13 Score=108.06 Aligned_cols=121 Identities=18% Similarity=0.209 Sum_probs=95.4
Q ss_pred hHHHHHHHHHHhCCceeeecCCCCCCCCccHHHHHHHHHHHHhhCCCceeEeeechhhhHHHHHhcCCHHHhhhhchhcc
Q psy5139 59 EQKEKYLPRLAQTDLMGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEKYLPRLA 138 (216)
Q Consensus 59 ~~~~~~l~~l~~g~~~~~~~~e~~gG~~~~~~~~~~v~e~lar~~~~~~~~v~~~~~~~~~~~~~~g~~~~~~~~l~~~~ 138 (216)
..+.++++.+.+.|++++.+||++||.+.+..+...+.|++++.+.++.+++..+.......+. +|+++|++.|++.+.
T Consensus 24 ~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~l~-~g~~~q~~~~l~~~~ 102 (366)
T 1r2j_A 24 ELPRDLLVRLGADGLLCAEVAAEHGGLGLGSRENGEFTAHVGSLCSSLRSVMTSQGMAAWTVQR-LGDAGQRATFLKELT 102 (366)
T ss_dssp CCCHHHHHHHHHTTTTSTTSCGGGTCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH-HSCHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHCCCCCCCCChhhCCCCCCHHHHHHHHHHHHHHChHHHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHh
Confidence 3567799999999999999999999999999999999999999988765544333223445667 999999999999886
Q ss_pred cccc-----cccccchhhhhhhhcccc-CCceeeccceeeeecCcccC
Q psy5139 139 QTDV-----SRTSRGYKALEWHAFYGR-TDSLPLNDHLSHISSGCVGF 180 (216)
Q Consensus 139 ~~~l-----g~~~~g~~~~~~~~~~~~-~~~~~l~g~k~~va~~~~g~ 180 (216)
++.+ .+++.|++......+..+ +++|+|||+|.|++++..++
T Consensus 103 ~G~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad 150 (366)
T 1r2j_A 103 SGKLAAVGFSERQAGSDLSAMRTRVRLDGDTAVVDGHKVWTTAAAYAD 150 (366)
T ss_dssp CC-CEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEETTTTTCS
T ss_pred CCCeeEEEeCCCCCCCchhhCEeEEEEeCCEEEEEEEEecccCCcccC
Confidence 5533 456777776544445555 88999999999999988755
No 46
>3r7k_A Probable acyl COA dehydrogenase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: FDA; 2.50A {Mycobacterium abscessus}
Probab=99.36 E-value=3e-13 Score=109.63 Aligned_cols=122 Identities=20% Similarity=0.238 Sum_probs=96.2
Q ss_pred hHHHHHHHHHHhCCceeeecCCCCCCCCccHHHHHHHHHHHHhh-CCCceeEeeechhhhHHHHHhcCCHHHhhhhchhc
Q psy5139 59 EQKEKYLPRLAQTDLMGVEIPQEYGGPGLSFMTDILIVEEIARV-DPSVSILVDIQNTLVNDLIIKLGTTEQKEKYLPRL 137 (216)
Q Consensus 59 ~~~~~~l~~l~~g~~~~~~~~e~~gG~~~~~~~~~~v~e~lar~-~~~~~~~v~~~~~~~~~~~~~~g~~~~~~~~l~~~ 137 (216)
+.+.++++.+.+.|++++.+||++||.+.+..+...+.|++++. ++++++.+..+.......+..+|+++|++.|++.+
T Consensus 60 ~~~~~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~eela~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~ 139 (403)
T 3r7k_A 60 EIPRDLHLNAAEVGLLGIGFPEEVGGSGGNAIDSALVTEAILAAGGSTGVCAALFTHGIALPHIAANGSDALIERYVRPT 139 (403)
T ss_dssp SCCTHHHHHHHHHTCTTBTSCGGGTCCBCCHHHHHHHHHHHHHTTCCHHHHHHHCTHHHHSHHHHHHCCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHhCCCCcCCCChhhCCCCCCHHHHHHHHHHHHhcCCchHHHHHHHHhhHHHHHHHHhCCHHHHHHHHHHH
Confidence 34568899999999999999999999999999999999999997 66553322222234556778899999999999988
Q ss_pred cccc------ccccccchhhhhhhhcccc-CCceeeccceeeeecCcccC
Q psy5139 138 AQTD------VSRTSRGYKALEWHAFYGR-TDSLPLNDHLSHISSGCVGF 180 (216)
Q Consensus 138 ~~~~------lg~~~~g~~~~~~~~~~~~-~~~~~l~g~k~~va~~~~g~ 180 (216)
.++. +.+++.|++.....++..+ +++|+|||+|.|++++..++
T Consensus 140 ~~G~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~vs~a~~Ad 189 (403)
T 3r7k_A 140 LAGKMIGSLGVTEPGAGSDVANLRTRAVREGDTYVVNGAKTFITSGVRAD 189 (403)
T ss_dssp HTTSCCEEEECCBTTBSSCGGGCCCEEEECSSEEEEEEEEEEEETTTTCS
T ss_pred hCCCeeEEEEecCCCCCCChhhceEEEEEECCEEEEEEEEEcccCCccCC
Confidence 6653 3467777776555555555 88999999999999988765
No 47
>3nf4_A Acyl-COA dehydrogenase; seattle structural genomics center for infectious disease, S FAD, FADH, tuberculosis, oxidoredu; HET: FAD; 2.35A {Mycobacterium thermoresistibile}
Probab=99.36 E-value=2.5e-13 Score=109.46 Aligned_cols=121 Identities=25% Similarity=0.387 Sum_probs=97.3
Q ss_pred hHHHHHHHHHHhCCceeeecCCCCCCCCccHHHHHHHHHHHHhhCCCceeEeeechhhhHHHHHhcCCHHHhhhhchhcc
Q psy5139 59 EQKEKYLPRLAQTDLMGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEKYLPRLA 138 (216)
Q Consensus 59 ~~~~~~l~~l~~g~~~~~~~~e~~gG~~~~~~~~~~v~e~lar~~~~~~~~v~~~~~~~~~~~~~~g~~~~~~~~l~~~~ 138 (216)
..+.++++.+.+.|++++.+||++||.+.+..+...+.|++++.+.++.+.+..+ ......+..+|+++|++.|++.+.
T Consensus 47 ~~~~~~~~~l~~~G~~~~~~P~~~GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~-~~~~~~l~~~g~~~q~~~~l~~~~ 125 (387)
T 3nf4_A 47 TYPEGVFEQLGAAGLLSLPQPEEWGGGGQPYEVYLQVLEEIAARWASVAVAVSVH-SLSSHPLLVFGTEEQKKRWLPGML 125 (387)
T ss_dssp CCCTTHHHHHHTTTTTSTTSCGGGTCCCCCHHHHHHHHHHHHTTCHHHHHHHHHH-HHHTHHHHHHSCHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHCCCCCCCCCHhhCCCCCCHHHHHHHHHHHHHhCchHHHHHHHH-HHHHHHHHHhCCHHHHHHHHHHHh
Confidence 3567899999999999999999999999999999999999999988765544333 244466778999999999999886
Q ss_pred ccc------ccccccchhhhhhhhcccc-CCceeeccceeeeecCcccC
Q psy5139 139 QTD------VSRTSRGYKALEWHAFYGR-TDSLPLNDHLSHISSGCVGF 180 (216)
Q Consensus 139 ~~~------lg~~~~g~~~~~~~~~~~~-~~~~~l~g~k~~va~~~~g~ 180 (216)
++. +.+++.|++......+..+ +++|+|||+|.|++++..++
T Consensus 126 ~g~~~~~~a~tEp~~gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad 174 (387)
T 3nf4_A 126 SGEQIGAYSLSEPQAGSDAAALRCAATPTDGGYVINGSKSWITHGGKAD 174 (387)
T ss_dssp TSSCCEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEEETTTTCS
T ss_pred CCCeeEEEEEcCCCCCCChhhCEEEEEEeCCEEEEEeEEecccCCcccC
Confidence 653 3567777776554455555 88999999999999988765
No 48
>2pg0_A Acyl-COA dehydrogenase; GK1316, geobacillus kaustophilus HTA structural genomics, PSI, protein structure initiative; HET: FAD; 1.80A {Geobacillus kaustophilus}
Probab=99.36 E-value=5.4e-13 Score=107.50 Aligned_cols=120 Identities=22% Similarity=0.357 Sum_probs=96.0
Q ss_pred hHHHHHHHHHHhCCceeeecCCCCCCCCccHHHHHHHHHHHHhhC-CCceeEeeechhhhHHHHHhcCCHHHhhhhchhc
Q psy5139 59 EQKEKYLPRLAQTDLMGVEIPQEYGGPGLSFMTDILIVEEIARVD-PSVSILVDIQNTLVNDLIIKLGTTEQKEKYLPRL 137 (216)
Q Consensus 59 ~~~~~~l~~l~~g~~~~~~~~e~~gG~~~~~~~~~~v~e~lar~~-~~~~~~v~~~~~~~~~~~~~~g~~~~~~~~l~~~ 137 (216)
..+.++++.+.+.|++++.+||++||.+.+..+...+.|++++.+ +++.+.+ +.......+..+|+++|++.|++.+
T Consensus 41 ~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eela~~~~~~~~~~~--~~~~~~~~l~~~g~~~q~~~~l~~~ 118 (385)
T 2pg0_A 41 IIPRSFWAKMGENGFLCPWVDEKYGGLNADFAYSVVINEELEKVGSSLVGIGL--HNDIVTPYIASYGTEEQKQKWLPKC 118 (385)
T ss_dssp SCCHHHHHHHHHTTCSSTTSCGGGTCCCCCHHHHHHHHHHHHHHCGGGHHHHH--HHHTTHHHHHHHCCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHCCCCCcCCChhhCCCCCCHHHHHHHHHHHHhhCCchHHHHH--HhhHHHHHHHHhCCHHHHHHHHHHH
Confidence 355678999999999999999999999999999999999999998 7765433 3334556778899999999999987
Q ss_pred cccc------ccccccchhhhhhhhcccc-CCceeeccceeeeecCcccC
Q psy5139 138 AQTD------VSRTSRGYKALEWHAFYGR-TDSLPLNDHLSHISSGCVGF 180 (216)
Q Consensus 138 ~~~~------lg~~~~g~~~~~~~~~~~~-~~~~~l~g~k~~va~~~~g~ 180 (216)
.++. +.+++.|++......+..+ +++|+|||+|.|++++..++
T Consensus 119 ~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad 168 (385)
T 2pg0_A 119 VTGELITAIAMTEPGAGSDLANISTTAVKDGDYYIVNGQKTFITNGIHAD 168 (385)
T ss_dssp HHTSSCEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEETTTTTCS
T ss_pred hCCCeEEEEEeCCCCCCcCHhhCeEEEEEcCCEEEEEeEEecccCCcccC
Confidence 6553 3466777766444444555 88999999999999987654
No 49
>4hr3_A Putative acyl-COA dehydrogenase; ssgcid, seattle structural genomics center for infectious DI niaid; HET: FAD; 1.80A {Mycobacterium abscessus}
Probab=99.36 E-value=1.4e-12 Score=105.98 Aligned_cols=120 Identities=17% Similarity=0.144 Sum_probs=93.1
Q ss_pred hHHHHHHHHHHhCCceeeecCCCCCCCCccHHHHHHHHHHHHhhCCCce-eEeeechhhhHHHHHhcCCHHHhhhhchhc
Q psy5139 59 EQKEKYLPRLAQTDLMGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVS-ILVDIQNTLVNDLIIKLGTTEQKEKYLPRL 137 (216)
Q Consensus 59 ~~~~~~l~~l~~g~~~~~~~~e~~gG~~~~~~~~~~v~e~lar~~~~~~-~~v~~~~~~~~~~~~~~g~~~~~~~~l~~~ 137 (216)
+.++++++.+.+.|++++.+||++||.+.+..+...+.|++++.+.+.. +....+.......+..+|+++|++.|++.+
T Consensus 58 ~~~~~~~~~l~e~G~~~~~~P~~~GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~ 137 (415)
T 4hr3_A 58 PELDSLKAKARAAGLWNLFLPDPELGGGLSNSEYAPLAEQMGRSLFAPTVFNCNAPDSGNMEVLHRYGSQEQKEVWLEPL 137 (415)
T ss_dssp THHHHHHHHHHHTTCSSTTCCCTTTSCCCCHHHHHHHHHHHTTCSSHHHHTTCCTTHHHHHHHHHHHCCHHHHHHTHHHH
T ss_pred hhHHHHHHHHHhCCCcCcCCCHHHCCCCCCHHHHHHHHHHHhcccchHHHHHHhccccchHHHHHHhCCHHHHHHHHHHH
Confidence 3678899999999999999999999999999999999999999764322 211111112235678899999999999988
Q ss_pred cccc------ccccc-cchhhhhhhhcccc-CCceeeccceeeeecCcc
Q psy5139 138 AQTD------VSRTS-RGYKALEWHAFYGR-TDSLPLNDHLSHISSGCV 178 (216)
Q Consensus 138 ~~~~------lg~~~-~g~~~~~~~~~~~~-~~~~~l~g~k~~va~~~~ 178 (216)
.++. +.+++ .|++.....++..+ +++|+|||+|.|++++..
T Consensus 138 ~~G~~~~~~a~tEp~~~gsd~~~~~t~A~~~g~g~~lnG~K~~is~a~~ 186 (415)
T 4hr3_A 138 LEGDIRSAFCMTEPDVASSDATNMAATAVVEGDEVVINGRKWWSTGVGH 186 (415)
T ss_dssp HTTSCEEEEECCCTTSCTTSGGGCCCEEEEETTEEEEEEEEEEEETTTS
T ss_pred hCCCceeEEEEcCCCCCCCchhhCeeEEEEECCEEEEeeEEeeECCCCC
Confidence 6653 34666 77776555555555 889999999999999955
No 50
>1rx0_A Acyl-COA dehydrogenase family member 8, mitochondrial; flavoprotein, coenzyme A, oxidoreductase; HET: FAD 2MC; 1.77A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1
Probab=99.35 E-value=4.7e-13 Score=108.13 Aligned_cols=121 Identities=24% Similarity=0.291 Sum_probs=95.2
Q ss_pred hHHHHHHHHHHhCCceeeecCCCCCCCCccHHHHHHHHHHHHhhCCCceeEeeechhhhHHHHHhcCCHHHhhhhchhcc
Q psy5139 59 EQKEKYLPRLAQTDLMGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEKYLPRLA 138 (216)
Q Consensus 59 ~~~~~~l~~l~~g~~~~~~~~e~~gG~~~~~~~~~~v~e~lar~~~~~~~~v~~~~~~~~~~~~~~g~~~~~~~~l~~~~ 138 (216)
..+.++++.+.+.|++++.+||++||.+.+..+...+.|++++.+.++.+++..+ ......+..+|+++|++.|++.+.
T Consensus 50 ~~p~~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~eela~~~~~~~~~~~~~-~~~~~~l~~~g~~~qk~~~l~~~~ 128 (393)
T 1rx0_A 50 LFPVDVMRKAAQLGFGGVYIQTDVGGSGLSRLDTSVIFEALATGCTSTTAYISIH-NMCAWMIDSFGNEEQRHKFCPPLC 128 (393)
T ss_dssp CCCHHHHHHHHHTTCSSTTSCGGGTCCCCCHHHHHHHHHHHHTTCHHHHHHHHHH-HHHHHHHHHHSCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHhCCCCcCCCChhhCCCCCCHHHHHHHHHHHHHhCcchhHHHHHh-HHHHHHHHHHCCHHHHHHHHHHHh
Confidence 3566899999999999999999999999999999999999999887655433332 234456778999999999999886
Q ss_pred ccc------ccccccchhhhhhhhcccc-CCceeeccceeeeecCcccC
Q psy5139 139 QTD------VSRTSRGYKALEWHAFYGR-TDSLPLNDHLSHISSGCVGF 180 (216)
Q Consensus 139 ~~~------lg~~~~g~~~~~~~~~~~~-~~~~~l~g~k~~va~~~~g~ 180 (216)
++. +.+++.|++......+..+ +++|+|||+|.|++++..++
T Consensus 129 ~G~~~~~~a~tEp~~gsd~~~~~t~A~~~~~g~~lnG~K~~is~a~~Ad 177 (393)
T 1rx0_A 129 TMEKFASYCLTEPGSGSDAASLLTSAKKQGDHYILNGSKAFISGAGESD 177 (393)
T ss_dssp TTSSCEEEECCBTTBSSSGGGCCCEEEEETTEEEEEEEEEEEETTTTCS
T ss_pred CCCceEEEEecCCCCCcCcccceeEEEEcCCEEEEEeEEEeecCCccCC
Confidence 653 3566777765443444445 88999999999999987765
No 51
>1egd_A Medium chain acyl-COA dehydrogenase; flavoprotein, electron transfer; HET: FAD; 2.40A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1 PDB: 1egc_A* 1ege_A* 1t9g_A* 2a1t_A* 1udy_A* 3mdd_A* 3mde_A*
Probab=99.34 E-value=4.1e-13 Score=108.57 Aligned_cols=121 Identities=27% Similarity=0.323 Sum_probs=95.5
Q ss_pred hHHHHHHHHHHhCCceeeecCCCCCCCCccHHHHHHHHHHHHhhCCCceeEeeechhhhHHHHHhcCCHHHhhhhchhcc
Q psy5139 59 EQKEKYLPRLAQTDLMGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEKYLPRLA 138 (216)
Q Consensus 59 ~~~~~~l~~l~~g~~~~~~~~e~~gG~~~~~~~~~~v~e~lar~~~~~~~~v~~~~~~~~~~~~~~g~~~~~~~~l~~~~ 138 (216)
..+.++++.+.+.|++++.+||++||.+.+..+...+.|++++.+.++.+++ .+.......+..+|+++|++.|++.+.
T Consensus 47 ~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eel~~~~~~~~~~~-~~~~~~~~~l~~~g~~~q~~~~l~~~~ 125 (396)
T 1egd_A 47 EYPVPLIRRAWELGLMNTHIPENCGGLGLGTFDACLISEELAYGCTGVQTAI-EGNSLGQMPIIIAGNDQQKKKYLGRMT 125 (396)
T ss_dssp CCCHHHHHHHHHHTCSSTTSCGGGTSCCCCHHHHHHHHHHHHHHCHHHHHHH-HHHHHHTHHHHHHCCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHCCCCCCCCchhhCCCCCCHHHHHHHHHHHHhhCccHHHHH-HhhhHHHHHHHHhCCHHHHHHHHHHHh
Confidence 3556789999999999999999999999999999999999999988766543 333344455778999999999999876
Q ss_pred ccc------ccccccchhhhhhhhcccc-CCceeeccceeeeecCcccC
Q psy5139 139 QTD------VSRTSRGYKALEWHAFYGR-TDSLPLNDHLSHISSGCVGF 180 (216)
Q Consensus 139 ~~~------lg~~~~g~~~~~~~~~~~~-~~~~~l~g~k~~va~~~~g~ 180 (216)
++. +.+++.|++......+..+ +++|+|||+|.|++++..++
T Consensus 126 ~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad 174 (396)
T 1egd_A 126 EEPLMCAYCVTEPGAGSDVAGIKTKAEKKGDEYIINGQKMWITNGGKAN 174 (396)
T ss_dssp HSCCCEEEECCBTTBSSSGGGCCCEEEECSSEEEEEEEEEEEETTTTCS
T ss_pred CCCceEEEEecCCCCCcchhhCeeEEEEeCCEEEEEEEEEcccCCcccC
Confidence 553 3466777765444344445 78999999999999987654
No 52
>3sf6_A Glutaryl-COA dehydrogenase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; HET: FDA; 1.70A {Mycobacterium smegmatis}
Probab=99.33 E-value=7.4e-13 Score=107.30 Aligned_cols=120 Identities=24% Similarity=0.351 Sum_probs=96.9
Q ss_pred HH-HHHHHHHHhCCceeeecCCCCCCCCccHHHHHHHHHHHHhhCCCceeEeeechhhhHHHHHhcCCHHHhhhhchhcc
Q psy5139 60 QK-EKYLPRLAQTDLMGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEKYLPRLA 138 (216)
Q Consensus 60 ~~-~~~l~~l~~g~~~~~~~~e~~gG~~~~~~~~~~v~e~lar~~~~~~~~v~~~~~~~~~~~~~~g~~~~~~~~l~~~~ 138 (216)
.+ .++++.+.+.|++++.+ |++||.+.+..+...+.|++++.+.++.+++..+.......+..+|+++|++.|++.+.
T Consensus 62 ~p~~~~~~~l~~~Gl~~l~~-~e~GG~g~~~~~~~~v~eela~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~ 140 (403)
T 3sf6_A 62 LPARELAVELGELGLLGMHL-KGYGCAGMSAVAYGLACLELEAGDSGIRSLVSVQGSLAMYAIHAFGSDEQKDQWLPDMA 140 (403)
T ss_dssp CCHHHHHHHHHHTTCSSTTS-CSTTCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHTHHHHHHHHCCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHCCCCcccc-hhhCCCCCCHHHHHHHHHHHHHhcccHHHHHHHhhhhHHHHHHHhCCHHHHHHHHHHHh
Confidence 45 78999999999999999 99999999999999999999999887654443333344567888999999999999886
Q ss_pred ccc------ccccccchhhhhhhhcccc-CCceeeccceeeeecCcccC
Q psy5139 139 QTD------VSRTSRGYKALEWHAFYGR-TDSLPLNDHLSHISSGCVGF 180 (216)
Q Consensus 139 ~~~------lg~~~~g~~~~~~~~~~~~-~~~~~l~g~k~~va~~~~g~ 180 (216)
++. +.+++.|++.....++..+ +++|+|||+|.|++++..++
T Consensus 141 ~G~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~is~a~~Ad 189 (403)
T 3sf6_A 141 SGHRIGCFGLTEPDHGSDPAGMRTRATRSGDDWILTGTKMWITNGSVAD 189 (403)
T ss_dssp TTSSCEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEEETGGGCS
T ss_pred CCCceEEEEEccCCCCCCchhcEEEEEEECCEEEEEEEEEeecCCcccC
Confidence 653 3567777776555555555 88999999999999988765
No 53
>1ivh_A Isovaleryl-COA dehydrogenase; oxidoreductase, acyl-COA dehydrogenase, flavoprotein, isovaleric acidemia; HET: FAD COS; 2.60A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1
Probab=99.33 E-value=4.9e-13 Score=108.02 Aligned_cols=118 Identities=25% Similarity=0.487 Sum_probs=94.7
Q ss_pred HHHHHHHhCCceeeecCCCCCCCCccHHHHHHHHHHHHhhCCCceeEeeechhhhHHHHHhcCCHHHhhhhchhccccc-
Q psy5139 63 KYLPRLAQTDLMGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEKYLPRLAQTD- 141 (216)
Q Consensus 63 ~~l~~l~~g~~~~~~~~e~~gG~~~~~~~~~~v~e~lar~~~~~~~~v~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~- 141 (216)
++++.+.+.|++++.+||++||.+.+..+...+.|++++.+.++.+.+..+.......+..+|+++|++.|++.+.++.
T Consensus 50 ~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~l~~G~~ 129 (394)
T 1ivh_A 50 EFWKQLGNLGVLGITAPVQYGGSGLGYLEHVLVMEEISRASGAVGLSYGAHSNLCINQLVRNGNEAQKEKYLPKLISGEY 129 (394)
T ss_dssp HHHHHHHHHTCTTTTSCGGGTCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHTTTHHHHHHHCCHHHHHHHHHHHHHTSS
T ss_pred HHHHHHHHCCCCCCCCCcccCCCCCCHHHHHHHHHHHHhhchhHHHHHHHhhHHHHHHHHHhCCHHHHHHHHHHHhCCCe
Confidence 7899999999999999999999999999999999999999887655443332245567788999999999999886654
Q ss_pred -----ccccccchhhhhhhhcccc-CCceeeccceeeeecCcccC
Q psy5139 142 -----VSRTSRGYKALEWHAFYGR-TDSLPLNDHLSHISSGCVGF 180 (216)
Q Consensus 142 -----lg~~~~g~~~~~~~~~~~~-~~~~~l~g~k~~va~~~~g~ 180 (216)
+.+++.|++......+..+ +++|+|||+|.|++++..++
T Consensus 130 ~~~~a~tEp~~gsd~~~~~t~A~~~~~g~~lnG~K~~vs~~~~Ad 174 (394)
T 1ivh_A 130 IGALAMSEPNAGSDVVSMKLKAEKKGNHYILNGNKFWITNGPDAD 174 (394)
T ss_dssp CEEEECCBTTBSSSGGGCCCEEEECSSEEEEEEEEEEEETGGGCS
T ss_pred EEEEEecCCCCCcCcccceEEEEEcCCEEEEEeEEEeeCCCCcCC
Confidence 3466777766544445545 78999999999999987655
No 54
>2ix5_A Acyl-coenzyme A oxidase 4, peroxisomal; FAD, ACX4, flavin, peroxisome, glyoxysome, fatty acid metabo lipid metabolism, acyl-COA oxidase; HET: CAA FAD; 2.7A {Arabidopsis thaliana} PDB: 2ix6_A*
Probab=99.32 E-value=7.4e-13 Score=108.27 Aligned_cols=121 Identities=30% Similarity=0.390 Sum_probs=95.2
Q ss_pred hHHHHHHHHHHhCCceeeecCCCCCCCCccHHHHHHHHHHHHhhCCCceeEeeechhhhHHHHHhcCCHHHhhhhchhcc
Q psy5139 59 EQKEKYLPRLAQTDLMGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEKYLPRLA 138 (216)
Q Consensus 59 ~~~~~~l~~l~~g~~~~~~~~e~~gG~~~~~~~~~~v~e~lar~~~~~~~~v~~~~~~~~~~~~~~g~~~~~~~~l~~~~ 138 (216)
+.+.++++.+.+.|++++.+| ++||.+.+..+...+.|++++.+.++.+++..+.......+..+|+++|++.|++.+.
T Consensus 86 ~~p~~~~~~l~e~Gl~~l~~p-e~GG~G~~~~~~~~v~eela~~~~~~~~~~~~~~~~~~~~l~~~gt~~qk~~~l~~l~ 164 (436)
T 2ix5_A 86 EFPFHITPKLGAMGVAGGSIK-GYGCPGLSITANAIATAEIARVDASCSTFILVHSSLGMLTIALCGSEAQKEKYLPSLA 164 (436)
T ss_dssp CCCGGGHHHHHTTTCTTTTCC-STTCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHTTHHHHHHHHSCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHcCCCcCcCC-CCCCCCCCHHHHHHHHHHHHhhCccHHHHHHhHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 456778999999999999999 8999999999999999999999877554333333345566778999999999999887
Q ss_pred ccc------ccccccchhhhhhhhcccc-CCceeeccceeeeecCcccC
Q psy5139 139 QTD------VSRTSRGYKALEWHAFYGR-TDSLPLNDHLSHISSGCVGF 180 (216)
Q Consensus 139 ~~~------lg~~~~g~~~~~~~~~~~~-~~~~~l~g~k~~va~~~~g~ 180 (216)
++. +.+++.|++......+..+ +++|+|||+|.|++++..++
T Consensus 165 ~G~~~~a~a~tEp~~GSd~~~~~t~A~~~gdg~vLnG~K~~is~a~~Ad 213 (436)
T 2ix5_A 165 QLNTVACWALTEPDNGSDASGLGTTATKVEGGWKINGQKRWIGNSTFAD 213 (436)
T ss_dssp TTSSCEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEEETTTTCS
T ss_pred CCCeeeEEEecCCCCCCCcccceEEEEEeCCEEEEeeeccCCCCCcccC
Confidence 653 3466777766544445555 88999999999999987655
No 55
>1buc_A Butyryl-COA dehydrogenase; acyl-COA dehydrogenase short-chain acyl-COA dehydrogenase, flavoprotein, oxidoreductase; HET: CAA FAD; 2.50A {Megasphaera elsdenii} SCOP: a.29.3.1 e.6.1.1
Probab=99.31 E-value=8.1e-13 Score=106.37 Aligned_cols=122 Identities=25% Similarity=0.381 Sum_probs=95.4
Q ss_pred hHHHHHHHHHHhCCceeeecCCCCCCCC---ccHHHHHHHHHHHHhhCCCceeEeeechhhhHHHHHhcCCHHHhhhhch
Q psy5139 59 EQKEKYLPRLAQTDLMGVEIPQEYGGPG---LSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEKYLP 135 (216)
Q Consensus 59 ~~~~~~l~~l~~g~~~~~~~~e~~gG~~---~~~~~~~~v~e~lar~~~~~~~~v~~~~~~~~~~~~~~g~~~~~~~~l~ 135 (216)
..+.++++.+.+.|++++.+||++||.+ .+..+...+.|++++.+.++.+.+..+.......+..+|+++|++.|++
T Consensus 36 ~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~ 115 (383)
T 1buc_A 36 IYDKELIDELLSLGITGAYFEEKYGGSGDDGGDVLSYILAVEELAKYDAGVAITLSATVSLCANPIWQFGTEAQKEKFLV 115 (383)
T ss_dssp CCCHHHHHHHHTTSGGGTTSCGGGTCGGGGTCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHTHHHHHHHCCHHHHHHTHH
T ss_pred CCCHHHHHHHHHCCCCCCCCChhhCCCCCCCCCHHHHHHHHHHHHhhChHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHH
Confidence 3556789999999999999999999999 9999999999999999887655444332345567788999999999999
Q ss_pred hccccc------ccccccchhhhhhhhcccc--CCceeeccceeeeecCcccC
Q psy5139 136 RLAQTD------VSRTSRGYKALEWHAFYGR--TDSLPLNDHLSHISSGCVGF 180 (216)
Q Consensus 136 ~~~~~~------lg~~~~g~~~~~~~~~~~~--~~~~~l~g~k~~va~~~~g~ 180 (216)
.+.++. +.+++.|++......+..+ +++|+|||+|.|++++..++
T Consensus 116 ~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~~g~~lnG~K~~~s~~~~Ad 168 (383)
T 1buc_A 116 PLVEGTKLGAFGLTEPNAGTDASGQQTIATKNDDGTYTLNGSKIFITNGGAAD 168 (383)
T ss_dssp HHHHTSSCEEEECCBTTBSSCGGGCCCEEEECTTSCEEEEEEEEEEETTTTCS
T ss_pred HHhCCCeeEEEEeCCCCCCCChhhCEeEEEEcCCCEEEEEEEEeccCCCCcCC
Confidence 876553 3467777765433333333 57899999999999988755
No 56
>3swo_A Glutaryl-COA dehydrogenase; ssgcid, glutaryl-COA dehdrogenase, mycobacerium smegmatis, S genomics; HET: FDA; 1.45A {Mycobacterium smegmatis}
Probab=99.30 E-value=1e-12 Score=106.34 Aligned_cols=121 Identities=23% Similarity=0.313 Sum_probs=96.8
Q ss_pred hHHHHHHHHHHhCCceeeecCCCCCCCCccHHHHHHHHHHHHhhCCCceeEeeechhhhHHHHHhcCCHHHhhhhchhcc
Q psy5139 59 EQKEKYLPRLAQTDLMGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEKYLPRLA 138 (216)
Q Consensus 59 ~~~~~~l~~l~~g~~~~~~~~e~~gG~~~~~~~~~~v~e~lar~~~~~~~~v~~~~~~~~~~~~~~g~~~~~~~~l~~~~ 138 (216)
+.+.++++.+.+.|++++.+ |++||.+.+..+...+.|++++.+.++.+++..+.......+..+|+++|++.|++.+.
T Consensus 57 ~~~~~~~~~l~~~Gl~~l~~-~e~GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~ 135 (399)
T 3swo_A 57 TLPSELAKEFGNLGVLGMHL-QGYGCAGTNAVSYGLACMELEAGDSGFRSFVSVQGSLSMFSIYRYGSEEQKNEWLPRLA 135 (399)
T ss_dssp CCCTTHHHHHHHHTCTTTTS-CSTTCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHTTTHHHHHHHHCCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHCCCCcCCh-hhhCCCCCCHHHHHHHHHHHHHhCccHHHHHHHHhhhhhhHHHhcCCHHHHHHHHHHHh
Confidence 35578899999999999999 99999999999999999999999887654333333345667888999999999999876
Q ss_pred ccc------ccccccchhhhhhhhcccc-CCceeeccceeeeecCcccC
Q psy5139 139 QTD------VSRTSRGYKALEWHAFYGR-TDSLPLNDHLSHISSGCVGF 180 (216)
Q Consensus 139 ~~~------lg~~~~g~~~~~~~~~~~~-~~~~~l~g~k~~va~~~~g~ 180 (216)
++. +.+++.|++......+..+ +++|+|||+|.|++++..++
T Consensus 136 ~G~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~vs~a~~Ad 184 (399)
T 3swo_A 136 AGDAIGCFGLTEPDFGSNPAGMRTRARRDGSDWILNGTKMWITNGNLAD 184 (399)
T ss_dssp HTSSCEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEEETTTTCS
T ss_pred CCCeeeEEEecCCCCCCCCccceEEEEEeCCEEEEEEEEEeECCCCccC
Confidence 553 3467777776555555555 88999999999999987755
No 57
>2z1q_A Acyl-COA dehydrogenase; FAD, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: FAD; 2.30A {Thermus thermophilus}
Probab=99.29 E-value=5.2e-12 Score=106.67 Aligned_cols=122 Identities=24% Similarity=0.362 Sum_probs=94.8
Q ss_pred hhHHHHHHHHHHhCCceeeecCCCCCCCCccHHHHHHHHHHHHhhCCCceeEeeechhhhHHHHHhcCCHHHhhhhchhc
Q psy5139 58 TEQKEKYLPRLAQTDLMGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEKYLPRL 137 (216)
Q Consensus 58 ~~~~~~~l~~l~~g~~~~~~~~e~~gG~~~~~~~~~~v~e~lar~~~~~~~~v~~~~~~~~~~~~~~g~~~~~~~~l~~~ 137 (216)
...+.++++.+.+.|++++.+||++||.+.+..+...+.|++ +.+.++++.+..+......++..+|+++|++.|++.+
T Consensus 59 ~~~p~~~~~~l~e~Gl~~l~vPee~GG~g~~~~~~~~v~eel-~~~~s~~~~~~~~~~~~~~~l~~~Gt~eQk~~~Lp~l 137 (577)
T 2z1q_A 59 LELNVPLMRKAGELGLLAIDVPEEYGGLDLPKVISTVVAEEL-SGSGGFSVTYGAHTSIGTLPLVYFGTEEQKRKYLPKL 137 (577)
T ss_dssp GGGHHHHHHHHHHTTTTSTTSCGGGTCCCCCHHHHHHHHHHH-TTSCTHHHHHHHHHTTTTHHHHHHCCHHHHHTTHHHH
T ss_pred CCCCHHHHHHHHHCCCCCcCCChhhCCCCCCHHHHHHHHHHH-hhcccHHHHHhhhHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 467889999999999999999999999999999999999999 6677655444333333345678899999999999998
Q ss_pred cccc------ccccccchhhhhhhhcccc---CCceeeccceeeeecCcccC
Q psy5139 138 AQTD------VSRTSRGYKALEWHAFYGR---TDSLPLNDHLSHISSGCVGF 180 (216)
Q Consensus 138 ~~~~------lg~~~~g~~~~~~~~~~~~---~~~~~l~g~k~~va~~~~g~ 180 (216)
.++. +.+++.|++......+..+ +++|+|||+|.|++++..++
T Consensus 138 ~~G~~~~a~alTEp~aGSD~~~~~t~A~~~~dG~~~vLnG~K~~it~a~~Ad 189 (577)
T 2z1q_A 138 ASGEWIAAYCLTEPGSGSDALAAKTRATLSEDGKHYILNGVKQWISNAGFAH 189 (577)
T ss_dssp HHTSSCEEEECCBTTBSSSGGGCCCEEEECTTSSEEEEEEEEEEEETTTTCS
T ss_pred hCCCeEEEEEecCCCCCCCcccCeeEEEEeCCCCEEEEEEEeeCCCCCCccC
Confidence 6653 3567778765433333322 45799999999999988654
No 58
>3mpi_A Glutaryl-COA dehydrogenase; alpha-beta fold, oxidoreductase; HET: FAD GRA; 2.05A {Desulfococcus multivorans} PDB: 3mpj_A*
Probab=99.28 E-value=6.3e-13 Score=107.51 Aligned_cols=120 Identities=23% Similarity=0.461 Sum_probs=95.6
Q ss_pred HH-HHHHHHHHhCCceeeecCCCCCCCCc--cHHHHHHHHHHHHhhCCCceeEeeechhhhHH-HHHhcCCHHHhhhhch
Q psy5139 60 QK-EKYLPRLAQTDLMGVEIPQEYGGPGL--SFMTDILIVEEIARVDPSVSILVDIQNTLVND-LIIKLGTTEQKEKYLP 135 (216)
Q Consensus 60 ~~-~~~l~~l~~g~~~~~~~~e~~gG~~~--~~~~~~~v~e~lar~~~~~~~~v~~~~~~~~~-~~~~~g~~~~~~~~l~ 135 (216)
.+ .++++.+.+.|++++.+||++||.+. +..+...+.|++++.+.++.+.+..+ ..... .+..+|++++++.|++
T Consensus 37 ~~~~~~~~~l~~~Gl~~l~~P~~~GG~g~~~~~~~~~~v~eela~~~~~~~~~~~~~-~~~~~~~l~~~g~~~q~~~~l~ 115 (397)
T 3mpi_A 37 FPYEEAVRPMGELGFFGTVIPEEYGGEGMDQGWLAAMIVTEEIARGSSALRVQLNME-VLGCAYTILTYGSEALKKKYVP 115 (397)
T ss_dssp CCTTTTHHHHHHTTTTCTTSCGGGTSCCCTTHHHHHHHHHHHHHHHCHHHHHHHHHH-TTTTHHHHHHHSCHHHHHHHHH
T ss_pred CCHHHHHHHHHHCCCCccCCChhhCCCCCCCCHHHHHHHHHHHHhhCchHHHHHHHH-HHhHHHHHHHhCCHHHHHHHHH
Confidence 45 67899999999999999999999999 89999999999999988765544333 23334 6788999999999999
Q ss_pred hccccc------ccccccchhhhhhhhcccc-CCceeeccceeeeecCcccC
Q psy5139 136 RLAQTD------VSRTSRGYKALEWHAFYGR-TDSLPLNDHLSHISSGCVGF 180 (216)
Q Consensus 136 ~~~~~~------lg~~~~g~~~~~~~~~~~~-~~~~~l~g~k~~va~~~~g~ 180 (216)
.+.++. +.+++.|++......+..+ +++|+|||+|.|++++..++
T Consensus 116 ~~~~g~~~~~~a~tEp~~gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad 167 (397)
T 3mpi_A 116 KLSSAEFLGGFGITEPDAGSDVMAMSSTAEDKGDHWLLNGSKTWISNAAQAD 167 (397)
T ss_dssp HHHTTSSCCCEECCBTTBSSCGGGCCCEEEECSSEEEEEEEEEEEETTTTCS
T ss_pred HHhCCCeEEEEEecCCCCCCCcccCeEEEEEeCCEEEEEEEEEeeCCCcccC
Confidence 886653 2466677766554555555 88999999999999988765
No 59
>3owa_A Acyl-COA dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-structure, beta-barrel; HET: MSE FAD 1PE; 1.97A {Bacillus anthracis}
Probab=99.26 E-value=7.4e-12 Score=105.90 Aligned_cols=121 Identities=26% Similarity=0.406 Sum_probs=92.8
Q ss_pred hHHHHHHHHHHhCCceeeecCCCCCCCCccHHHHHHHHHHHHhhCCCceeEeeechhhhHHHHHhcCCHHHhhhhchhcc
Q psy5139 59 EQKEKYLPRLAQTDLMGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEKYLPRLA 138 (216)
Q Consensus 59 ~~~~~~l~~l~~g~~~~~~~~e~~gG~~~~~~~~~~v~e~lar~~~~~~~~v~~~~~~~~~~~~~~g~~~~~~~~l~~~~ 138 (216)
+.+.++++.+.+.|++++.+||++||.+.+..+...+.|++++.+. ....+..+......++..+|+++|++.|++.+.
T Consensus 65 ~~~~~~~~~l~e~Gl~gl~vPee~GG~G~~~~~~~~v~Eel~~~~~-~~~~~~~~~~~~~~~l~~~Gt~eQk~~~Lp~la 143 (597)
T 3owa_A 65 DRSVRLLKEAGELGLLGADVPEEYGGIGLDKVSSALIAEKFSRAGG-FAITHGAHVGIGSLPIVLFGNEEQKKKYLPLLA 143 (597)
T ss_dssp HHHHHHHHHHHHTTTTCTTSCGGGTCCCCCHHHHHHHHHHHGGGTH-HHHHHHHHHTTTTHHHHHHCCHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHCCCCcCCCChhhCCCCCCHHHHHHHHHHHHccch-HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHh
Confidence 5788999999999999999999999999999999999999998753 222122222333445678999999999999986
Q ss_pred ccc------ccccccchhhhhhhhccc--c-CCceeeccceeeeecCcccC
Q psy5139 139 QTD------VSRTSRGYKALEWHAFYG--R-TDSLPLNDHLSHISSGCVGF 180 (216)
Q Consensus 139 ~~~------lg~~~~g~~~~~~~~~~~--~-~~~~~l~g~k~~va~~~~g~ 180 (216)
++. +.+++.|++......+.. + +++|+|||+|.|++++..++
T Consensus 144 ~Ge~~~a~alTEp~aGSD~~~~~T~A~~~~dG~~yvLnG~K~~is~a~~Ad 194 (597)
T 3owa_A 144 TGEKLAAYALTEPGSGSDALGAKTTARLNAEGTHYVLNGEKQWITNSAFAD 194 (597)
T ss_dssp HTSSCEEEECCBTTBSSSGGGCCCEEEECTTSSEEEEEEEEEEEETTTTCS
T ss_pred CCCcceeeEecCCCCCCCcccceeEEEEeCCCCEEEEeeEEEEeCCCccCC
Confidence 653 356777877654433333 2 45699999999999988765
No 60
>2uxw_A VERY-long-chain specific acyl-COA dehydrogenase; fatty acid metabolism, transit peptide, disease mutation, LI metabolism, coenzyme A dehydrogenase; HET: FAD TH3; 1.45A {Homo sapiens} PDB: 3b96_A*
Probab=99.21 E-value=6.9e-12 Score=106.32 Aligned_cols=121 Identities=28% Similarity=0.348 Sum_probs=93.4
Q ss_pred HHHHHHHHHHhCCceeeecCCCCCCCCccHHHHHHHHHHHHhhCCCceeEeeechhhhHHHHHhcCCHHHhhhhchhccc
Q psy5139 60 QKEKYLPRLAQTDLMGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEKYLPRLAQ 139 (216)
Q Consensus 60 ~~~~~l~~l~~g~~~~~~~~e~~gG~~~~~~~~~~v~e~lar~~~~~~~~v~~~~~~~~~~~~~~g~~~~~~~~l~~~~~ 139 (216)
.+.++++.+.+.|++++.+||++||.+.+..+...+.|++++.+.++++.+..+.......+..+|+++|++.|++.+.+
T Consensus 80 ~p~~~~~~l~e~Gl~~l~~P~e~GG~gl~~~~~~~v~e~l~~~~~s~a~~~~~~~~~g~~~l~~~Gt~eqk~~~Lp~l~~ 159 (607)
T 2uxw_A 80 VEETTWQGLKELGAFGLQVPSELGGVGLCNTQYARLVEIVGMHDLGVGITLGAHQSIGFKGILLFGTKAQKEKYLPKLAS 159 (607)
T ss_dssp CCHHHHHHHHHTTTTCTTSCGGGTSCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHTTTTHHHHHHCCHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHcCCcCCCCChhhCCCCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 45678999999999999999999999999999999999999988765543333322335677889999999999998876
Q ss_pred cc------ccccccchhhhhhhhcccc---CCceeeccceeeeecCcccC
Q psy5139 140 TD------VSRTSRGYKALEWHAFYGR---TDSLPLNDHLSHISSGCVGF 180 (216)
Q Consensus 140 ~~------lg~~~~g~~~~~~~~~~~~---~~~~~l~g~k~~va~~~~g~ 180 (216)
+. +.+++.|++......+..+ +++|+|||+|.|++++..++
T Consensus 160 G~~~~~~alTEp~aGSD~~~~~t~A~~~~dG~~y~LnG~K~~is~~~~Ad 209 (607)
T 2uxw_A 160 GETVAAFCLTEPSSGSDAASIRTSAVPSPCGKYYTLNGSKLWISNGGLAD 209 (607)
T ss_dssp TSSCEEEECCBTTBSSCGGGCCCEEEECTTSSEEEEEEEEEEEETTTTCS
T ss_pred CCeEEEEEecCCCCCCCcccceeEEEEeCCCCEEEEEeEEEeecCCcccC
Confidence 54 3467777765333333332 34799999999999987654
No 61
>2c12_A Nitroalkane oxidase; oxidoreductase, flavoenzyme, acyl-COA dehydrogenase, long cell EDGE, FAD, inhibitor, flavoprotein; HET: SPM FAD PE4; 2.07A {Fusarium oxysporum} SCOP: a.29.3.1 e.6.1.1 PDB: 2c0u_A* 2zaf_A* 2reh_A* 3d9g_A* 3d9f_A* 3d9d_A* 3d9e_A* 3fcj_A*
Probab=99.19 E-value=2.6e-11 Score=99.24 Aligned_cols=115 Identities=17% Similarity=0.223 Sum_probs=88.7
Q ss_pred HHHHHHHHhCCceeeecCCCCCCCCccHHHHHHHHHHHHhhCCCceeEeeechhhhHHHHHhcCCHHHhhhhchhcc--c
Q psy5139 62 EKYLPRLAQTDLMGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEKYLPRLA--Q 139 (216)
Q Consensus 62 ~~~l~~l~~g~~~~~~~~e~~gG~~~~~~~~~~v~e~lar~~~~~~~~v~~~~~~~~~~~~~~g~~~~~~~~l~~~~--~ 139 (216)
.++++.+.+.|++++.+||++||.+.+..+...+.|++++.++++++.+..+ ......+..+|+++|++.|++.+. +
T Consensus 46 ~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eela~~~~~~~~~~~~~-~~~~~~l~~~g~~~q~~~~l~~~~~~~ 124 (439)
T 2c12_A 46 RPFYREAVRHGLIKAQVPIPLGGTMESLVHESIILEELFAVEPATSITIVAT-ALGLMPVILCDSPSLQEKFLKPFISGE 124 (439)
T ss_dssp HHHHHHHHHTTTTGGGSBGGGTCCBCCHHHHHHHHHHHHTTCCTTHHHHHHH-HHHHHHHHHSSCHHHHHHHTGGGGSSC
T ss_pred HHHHHHHHHCCCCCCCCChhhCCCCCCHHHHHHHHHHHHhhChHHHHHHHHh-HHHHHHHHHhCCHHHHHHHHHHHhhcC
Confidence 7889999999999999999999999999999999999999988766543333 233456778999999999999876 3
Q ss_pred cc------ccccccchh-----hhhhhhcccc-CCceeeccceeeeecCc
Q psy5139 140 TD------VSRTSRGYK-----ALEWHAFYGR-TDSLPLNDHLSHISSGC 177 (216)
Q Consensus 140 ~~------lg~~~~g~~-----~~~~~~~~~~-~~~~~l~g~k~~va~~~ 177 (216)
+. +.+++.|++ .....++..+ +++|+|||+|.|++++.
T Consensus 125 G~~~~~~a~tEp~~Gs~~~~sd~~~~~t~A~~~~~g~~lnG~K~~is~~~ 174 (439)
T 2c12_A 125 GEPLASLMHSEPNGTANWLQKGGPGLQTTARKVGNEWVISGEKLWPSNSG 174 (439)
T ss_dssp SCCCEEEECCCTTCSTTTTCTTSCCCSCEEEEETTEEEEEEEEECCTTTT
T ss_pred CCEEEEEEecCCCCCCCccccccccceeEEEEcCCEEEEEeEEEeecCCC
Confidence 42 245655652 2221233344 88999999999999885
No 62
>3mkh_A Nitroalkane oxidase; oxidoreductase flavoenzyme, acyl-COA dehydrogen flavoprotein, oxidoreductase; HET: FAD; 2.00A {Podospora anserina}
Probab=99.15 E-value=2.1e-11 Score=99.79 Aligned_cols=117 Identities=15% Similarity=0.153 Sum_probs=89.1
Q ss_pred hHH--HHHHHHHHhCCceeeecCCCCCCCCccHHHHHHHHHHHHhhCCCceeEeeechhhhHHHHHhcCCHHHhhhhchh
Q psy5139 59 EQK--EKYLPRLAQTDLMGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEKYLPR 136 (216)
Q Consensus 59 ~~~--~~~l~~l~~g~~~~~~~~e~~gG~~~~~~~~~~v~e~lar~~~~~~~~v~~~~~~~~~~~~~~g~~~~~~~~l~~ 136 (216)
.++ .++++.+.+.|++++.+||++||.+.+..+...+.|++++.++++++.+..+ .....++..+|+++ ++.|++.
T Consensus 43 ~~~~~~~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~eela~~~~~~~~~~~~~-~~~~~~l~~~g~~~-~~~~l~~ 120 (438)
T 3mkh_A 43 RFQSTQPTYAAAVSAGILKGQISPAHGGTGGTLIESAILVEECYSVEPSAALTIFAT-GLGLTPINLAAGPQ-HAEFLAP 120 (438)
T ss_dssp HHHTTHHHHHHHHHTTTTGGGSCGGGTCCCCCHHHHHHHHHHHHHHCHHHHHHHHHH-HHHHHHHHHHCCGG-GHHHHGG
T ss_pred cCCCcHHHHHHHHhCCCCCCCCCcccCCCCCCHHHHHHHHHHHHhhChhHHHHHHHh-hHHHHHHHhhCCHH-HHHHHHH
Confidence 455 7899999999999999999999999999999999999999987655433222 23345567789999 8899998
Q ss_pred cccc---c-----ccccccch-----hhhhhhhcccc-CCceeeccceeeeecCc
Q psy5139 137 LAQT---D-----VSRTSRGY-----KALEWHAFYGR-TDSLPLNDHLSHISSGC 177 (216)
Q Consensus 137 ~~~~---~-----lg~~~~g~-----~~~~~~~~~~~-~~~~~l~g~k~~va~~~ 177 (216)
+.++ . +.+++.|+ +......+..+ +++|+|||+|.|+++..
T Consensus 121 ~~~G~g~~~~~~a~tEp~~gs~~~~sd~~~~~t~A~~~g~g~~lnG~K~~is~a~ 175 (438)
T 3mkh_A 121 FLSGEGSPLASLVFSEPGGVANALEKGAPGFQTTARLEGDEWVINGEKMWATNCA 175 (438)
T ss_dssp GSSSCSCCCEEEECCCTTCCTTTTCTTSCCCSCEEEEETTEEEEEEEECSCTTTT
T ss_pred HhcCCCCceEEEEEccCCCCCCccccccccceeEEEEeCCEEEEEeEEEEecCCC
Confidence 8663 2 24566665 23223334444 88999999999999875
No 63
>1siq_A GCD, glutaryl-COA dehydrogenase; acyl-COA dehydrogenase, decarboxylation, flavin protein, oxidoreductase; HET: FAD; 2.10A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1 PDB: 2r0n_A* 1sir_A* 2r0m_A*
Probab=99.15 E-value=1e-11 Score=100.26 Aligned_cols=121 Identities=24% Similarity=0.376 Sum_probs=92.1
Q ss_pred hHHHHHHHHHHhCCceeeecCCCCCCCCccHHHHHHHHHHHHhhCCCceeEeeechhhhHHHHHhcCCHHHhhhhchhcc
Q psy5139 59 EQKEKYLPRLAQTDLMGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEKYLPRLA 138 (216)
Q Consensus 59 ~~~~~~l~~l~~g~~~~~~~~e~~gG~~~~~~~~~~v~e~lar~~~~~~~~v~~~~~~~~~~~~~~g~~~~~~~~l~~~~ 138 (216)
..+.++++.+.+.|++++.+ |++||.+.+..+...+.|++++.+.++.+.+..+.......+..+|+++|++.|++.+.
T Consensus 45 ~~~~~~~~~l~~~Gl~~l~~-~~~GG~g~~~~~~~~~~eel~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~l~ 123 (392)
T 1siq_A 45 VFHREIISEMGELGVLGPTI-KGYGCAGVSSVAYGLLARELERVDSGYRSAMSVQSSLVMHPIYAYGSEEQRQKYLPQLA 123 (392)
T ss_dssp CCCTHHHHHHHHTTCSSTTC-EETTEECCCHHHHHHHHHHHHTTCHHHHHHHHHHHHTTHHHHHHHSCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHhCCCCcccH-HhhCCCCCCHHHHHHHHHHHHHhCcHHHHHHHHHHhHHHHHHHHhCCHHHHHHHHHHHh
Confidence 35667899999999999999 99999999999999999999998876544333332234556778999999999999876
Q ss_pred ccc------ccccccchhhhhhhhcccc---CCceeeccceeeeecCcccC
Q psy5139 139 QTD------VSRTSRGYKALEWHAFYGR---TDSLPLNDHLSHISSGCVGF 180 (216)
Q Consensus 139 ~~~------lg~~~~g~~~~~~~~~~~~---~~~~~l~g~k~~va~~~~g~ 180 (216)
++. +.+++.|++......+..+ +++|+|||+|.|++++..++
T Consensus 124 ~g~~~~~~a~tEp~~gsd~~~~~t~A~~~~~~~g~~lnG~K~~vs~~~~Ad 174 (392)
T 1siq_A 124 KGELLGCFGLTEPNSGSDPSSMETRAHYNSSNKSYTLNGTKTWITNSPMAD 174 (392)
T ss_dssp TTSSCEEEECCBTTBSSCGGGCCCEEEEETTTTEEEEEEEEEEEETGGGCS
T ss_pred CCCeEEEEEECCCCCCcCccccEEEEEEeCCCCEEEEEEEEEeecCCcccC
Confidence 653 3566667665433333332 67899999999999987654
No 64
>3mxl_A Nitrososynthase; flavin monooxygenase, acyl-COA dehydrogenas oxidoreductase; 3.15A {Micromonospora carbonacea}
Probab=99.13 E-value=1.4e-11 Score=99.48 Aligned_cols=118 Identities=19% Similarity=0.229 Sum_probs=87.1
Q ss_pred hHHHHHHHHHHhCCceeeecCCCCCCCC-ccHHHHHHHHHHHHhhCCCceeEeeechhhhHHHH--HhcCCHHHh---hh
Q psy5139 59 EQKEKYLPRLAQTDLMGVEIPQEYGGPG-LSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLI--IKLGTTEQK---EK 132 (216)
Q Consensus 59 ~~~~~~l~~l~~g~~~~~~~~e~~gG~~-~~~~~~~~v~e~lar~~~~~~~~v~~~~~~~~~~~--~~~g~~~~~---~~ 132 (216)
+.+.++++.+.+.|++++.+||++||.+ .+..+...+.|++++.+.++.+....+.......+ ..+|+++|+ +.
T Consensus 39 ~~p~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~~~~eel~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~qk~~~~~ 118 (395)
T 3mxl_A 39 TFPVEAFEQFAKLGLMGATVPAELGGLGLTRLYDVATALMRLAEADASTALAWHVQLSRGLTLTYEWQHGTPPVRAMAER 118 (395)
T ss_dssp CCCHHHHHHHHHHTGGGCSSCTTTTSCCCCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHSSCHHHHHHHHH
T ss_pred CCCHHHHHHHHHCCCcCcCCChhhCCCCCcCHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHHHhhcCCHHHHhHHHH
Confidence 4667899999999999999999999999 89999999999999998876544333322222222 356999999 99
Q ss_pred hchhccccc------ccccccchhhhhhhhccccCCceeeccceeeeecCcccC
Q psy5139 133 YLPRLAQTD------VSRTSRGYKALEWHAFYGRTDSLPLNDHLSHISSGCVGF 180 (216)
Q Consensus 133 ~l~~~~~~~------lg~~~~g~~~~~~~~~~~~~~~~~l~g~k~~va~~~~g~ 180 (216)
|++.+.++. +.+++.|...+. ...+++|+|||+|.|++++..++
T Consensus 119 ~l~~~~~g~~~~~~a~tEp~~~~~~~~----t~~~~g~~lnG~K~~is~a~~Ad 168 (395)
T 3mxl_A 119 LLRAMAEGEAAVCGALKDAPGVVTELH----SDGAGGWLLSGRKVLVSMAPIAT 168 (395)
T ss_dssp HHHHHHHTSCCEECCCSBCTTCCCEEE----ECSSSCEEEEEEEEEETTGGGCS
T ss_pred HHHHHhcCCcEEEEEecCCCCCCCceE----EecCCEEEEeeEEEEecCccccC
Confidence 999886553 234554422111 11378999999999999987755
No 65
>3m9v_A FAD-dependent oxidoreductase; KIJD3, fatty acyl-COA dehydrogenase family, kijanose, kijani FAD, flavoprotein; HET: TYD; 2.05A {Actinomadura kijaniata}
Probab=99.04 E-value=4.8e-11 Score=97.69 Aligned_cols=119 Identities=20% Similarity=0.258 Sum_probs=86.3
Q ss_pred hhHHHHHHHHHHhCCceeeecCCCCCCCC-ccHHHHHHHHHHHHhhCCCceeEeeechhhhHHH--HHhcCCHHH---hh
Q psy5139 58 TEQKEKYLPRLAQTDLMGVEIPQEYGGPG-LSFMTDILIVEEIARVDPSVSILVDIQNTLVNDL--IIKLGTTEQ---KE 131 (216)
Q Consensus 58 ~~~~~~~l~~l~~g~~~~~~~~e~~gG~~-~~~~~~~~v~e~lar~~~~~~~~v~~~~~~~~~~--~~~~g~~~~---~~ 131 (216)
...+.++++.+.+.|++++.+||++||.+ .+..+...+.|++++.+.++.+.+..+....... +..+|+++| ++
T Consensus 49 ~~~~~~~~~~l~~~Gl~~l~~P~~~GG~gl~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~q~~~k~ 128 (439)
T 3m9v_A 49 GTFPTDTFDALRKDGLMGATVPAELGGLGVDRLYDVAVALLAVARADASTALALHMQLSRGLTLGYEWRHGDERARTLAE 128 (439)
T ss_dssp TCCCHHHHHHHHHTTGGGTTSCGGGTSCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHH
T ss_pred CCCCHHHHHHHHHCCCccCCCChhhCCCCCCCHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHH
Confidence 34667899999999999999999999999 8999999999999999877554333332222222 235699998 89
Q ss_pred hhchhccccc------ccccccchhhhhhhhccccCCceeeccceeeeecCcccC
Q psy5139 132 KYLPRLAQTD------VSRTSRGYKALEWHAFYGRTDSLPLNDHLSHISSGCVGF 180 (216)
Q Consensus 132 ~~l~~~~~~~------lg~~~~g~~~~~~~~~~~~~~~~~l~g~k~~va~~~~g~ 180 (216)
.|++.+.++. +.+++.+...+. ...+++|+|||+|.|++++..++
T Consensus 129 ~~l~~l~~g~~~~~~a~tEp~~~~~~~~----t~~~~g~vlnG~K~~~s~a~~Ad 179 (439)
T 3m9v_A 129 RILRGMVAGDAVVCSGIKDHHTAVTTLR----PDGAGGWLLSGRKTLVSMAPVGT 179 (439)
T ss_dssp HHHHHHHHTCCCEEEECEECTTCCCEEE----ECSSSCEEEEEEEEEETTGGGCS
T ss_pred HHHHHHhCCCceEEEeecCCCCCCCcee----eccCCEEEEEeEEEeecCccccC
Confidence 9999886553 234443321111 11378899999999999987654
No 66
>2wbi_A Acyl-COA dehydrogenase family member 11; human, phosphoprotein, oxidoreducta; HET: FAD; 2.80A {Homo sapiens}
Probab=99.03 E-value=1.1e-10 Score=95.17 Aligned_cols=117 Identities=21% Similarity=0.160 Sum_probs=87.5
Q ss_pred hHHHHHHHHHHhCCceeeecCCCCCCCCccHHHHHHHHHHHHhhCCC-ceeEeeechhhhHHHHHhcCCHHHhhhhchhc
Q psy5139 59 EQKEKYLPRLAQTDLMGVEIPQEYGGPGLSFMTDILIVEEIARVDPS-VSILVDIQNTLVNDLIIKLGTTEQKEKYLPRL 137 (216)
Q Consensus 59 ~~~~~~l~~l~~g~~~~~~~~e~~gG~~~~~~~~~~v~e~lar~~~~-~~~~v~~~~~~~~~~~~~~g~~~~~~~~l~~~ 137 (216)
+.++++++.+.+.|++++.+|| |.+.+..+...+.|++++.+.. ..+.+..+.......+..+|+++|++.|++.+
T Consensus 67 ~~~~~~~~~l~~~Gl~~l~~P~---G~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~qk~~~l~~l 143 (428)
T 2wbi_A 67 LVIDKLKEMAKVEGLWNLFLPA---VSGLSHVDYALIAEETGKCFFAPDVFNCQAPDTGNMEVLHLYGSEEQKKQWLEPL 143 (428)
T ss_dssp HHHHHHHHHHHHTTCCSTTCHH---HHCCCHHHHHHHHHHHTTSTTHHHHTTCCTTHHHHHHHHHHHCCHHHHHHTHHHH
T ss_pred ccHHHHHHHHHHCCCCeecCCC---CCCCCHHHHHHHHHHHHhhcchhhhHhhhccchhHHHHHHHhCCHHHHHHHHHHH
Confidence 4668899999999999999998 7788899999999999998643 22322221113345677899999999999988
Q ss_pred cccc------ccccc-cchhhhhhhhcccc-CCceeeccceeeeecCcc
Q psy5139 138 AQTD------VSRTS-RGYKALEWHAFYGR-TDSLPLNDHLSHISSGCV 178 (216)
Q Consensus 138 ~~~~------lg~~~-~g~~~~~~~~~~~~-~~~~~l~g~k~~va~~~~ 178 (216)
.++. +.+++ .|++......+..+ +++|+|||+|.|++++..
T Consensus 144 ~~G~~~~~~a~tEp~~aGsd~~~~~t~A~~~~~g~~lnG~K~~is~a~~ 192 (428)
T 2wbi_A 144 LQGNITSCFCMTEPDVASSDATNIECSIQRDEDSYVINGKKWWSSGAGN 192 (428)
T ss_dssp HHTSSEEEEECCCTTSCTTSGGGCCCEEEEETTEEEEEEEEEEEETTTS
T ss_pred hCCCeEEEEEEecCCcCCCCcccceEEEEEeCCEEEEEeEEeccCCCCC
Confidence 6653 24666 77776443444445 889999999999999876
No 67
>1w07_A Acyl-COA oxidase; oxidoreductase, peroxisomal beta-oxidation, FAD cofactor; HET: FAD; 2.0A {Arabidopsis thaliana} SCOP: a.29.3.2 a.29.3.2 e.6.1.2 PDB: 2fon_A*
Probab=99.01 E-value=2.5e-13 Score=116.22 Aligned_cols=73 Identities=18% Similarity=0.115 Sum_probs=55.9
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHHHccCCChhHHHHHHHhhHHHHHHhcCChhHHHHHHHHHHhCCce-eeecCCCCCCCC
Q psy5139 8 EIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEKYLPRLAQTDLM-GVEIPQEYGGPG 86 (216)
Q Consensus 8 ~~p~~~GG~g~~~~~~~~~~ee~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~l~~g~~~-~~~~~e~~gG~~ 86 (216)
.+|++|| .+..+...+.|+++ .+++ +..|..++...|..+|+++|+++|+|++.+|+++ +++++|+..|+|
T Consensus 74 ~~p~e~G---~~~~~~~~v~e~~~---~~~~--~~~~~~l~~~~l~~~Gt~eqk~~~L~~i~~Ge~~~~~a~TEp~~GSd 145 (659)
T 1w07_A 74 KRIIELR---LNEEEAGRLRHFID---QPAY--VDLHWGMFVPAIKGQGTEEQQKKWLSLANKMQIIGCYAQTELGHGSN 145 (659)
T ss_dssp HHHHHTT---CCHHHHHHHHHHHC---CCCH--HHHHHHTHHHHHHHHSCHHHHHHHHHHHHTTSSCEEEECCBTTBSSC
T ss_pred HhHHHhC---CCchHHHHHHHHhc---cchh--hhhHHhHHHHHHHHcCCHHHHHHHhhHHhcCCEEEEEEecCCCCCCC
Confidence 4788887 45667777766664 3433 4445456777889999999999999999999976 689999999987
Q ss_pred cc
Q psy5139 87 LS 88 (216)
Q Consensus 87 ~~ 88 (216)
+.
T Consensus 146 ~~ 147 (659)
T 1w07_A 146 VQ 147 (659)
T ss_dssp GG
T ss_pred cc
Confidence 63
No 68
>2jbr_A P-hydroxyphenylacetate hydroxylase C2 oxygenase C; flavoenzyme hydroxylase, oxidoreductase; 2.3A {Acinetobacter baumannii} PDB: 2jbs_A* 2jbt_A*
Probab=98.98 E-value=1.6e-10 Score=94.11 Aligned_cols=114 Identities=14% Similarity=0.079 Sum_probs=85.1
Q ss_pred hHHHHHHHHHHhCCceeeecCCCCCCCCccHHHHHHHHHHHHhhCCCceeEeeechhhhHHHHHhcCCHHHhhhhchhcc
Q psy5139 59 EQKEKYLPRLAQTDLMGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEKYLPRLA 138 (216)
Q Consensus 59 ~~~~~~l~~l~~g~~~~~~~~e~~gG~~~~~~~~~~v~e~lar~~~~~~~~v~~~~~~~~~~~~~~g~~~~~~~~l~~~~ 138 (216)
..+.++++.+.+.|++++.+||++||.+.+..+...+.|++++.+.++.+.+..+ ......+..+|+++|++.|++.
T Consensus 63 ~~p~~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~eela~~~~~~~~~~~~~-~~~~~~l~~~g~~~q~~~~l~~-- 139 (422)
T 2jbr_A 63 RVPDENIKLLKEIGLHRAFQPKVYGGLEMSLPDFANCIVTLAGACAGTAWAFSLL-CTHSHQIAMFSKQLQDEIWLKD-- 139 (422)
T ss_dssp SCCHHHHHHHHHTTGGGSSSCGGGTCCCCCHHHHHHHHHHHHHHCHHHHHHHHHH-HHHHHHHTTSCHHHHHHHHTTC--
T ss_pred CCCHHHHHHHHHCCchhcCCchhcCCCCCCHHHHHHHHHHHHhhCcCHHHHHHHH-HHHHHHHHhCCHHHHHHHHccC--
Confidence 3566899999999999999999999999999999999999999988765433322 2344566778999999999985
Q ss_pred cccccccccchhhhhhhhcccc-CCceeeccceeeeecCcccC
Q psy5139 139 QTDVSRTSRGYKALEWHAFYGR-TDSLPLNDHLSHISSGCVGF 180 (216)
Q Consensus 139 ~~~lg~~~~g~~~~~~~~~~~~-~~~~~l~g~k~~va~~~~g~ 180 (216)
...+.... +. ...+..+ +++|+|||+|.|++++..++
T Consensus 140 g~~~~a~a--~t---p~t~A~~~~~g~~lnG~K~~is~a~~Ad 177 (422)
T 2jbr_A 140 PDATASSS--IA---PFGKVEEVEGGIILNGDYGWSSGCDHAE 177 (422)
T ss_dssp TTCCEEEE--CS---CCSEEEEETTEEEEEEEEEEETTGGGCS
T ss_pred CCeEEEee--cC---CCeeEEEeCCEEEEeeeEeeecCCcccc
Confidence 11221111 11 1223334 78999999999999987654
No 69
>2or0_A Hydroxylase; APC7385, rhodococcus SP. RHA1, structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; HET: MSE; 2.10A {Rhodococcus SP}
Probab=98.96 E-value=1.8e-10 Score=93.60 Aligned_cols=114 Identities=13% Similarity=0.010 Sum_probs=85.3
Q ss_pred hHHHHHHHHHHhCCceeeecCCCCCCCCccHHHHHHHHHHHHhhCCCceeEeeechhhhHHHHHhcCCHHHhhhhchhcc
Q psy5139 59 EQKEKYLPRLAQTDLMGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEKYLPRLA 138 (216)
Q Consensus 59 ~~~~~~l~~l~~g~~~~~~~~e~~gG~~~~~~~~~~v~e~lar~~~~~~~~v~~~~~~~~~~~~~~g~~~~~~~~l~~~~ 138 (216)
..+.++++.+.+.|++++.+||++||.+.+..+...+.|++++.+.++++++..+ ......+..+|+++|++.|++.
T Consensus 48 ~~p~~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~eela~~~~~~~~~~~~~-~~~~~~l~~~g~~~q~~~~l~~-- 124 (414)
T 2or0_A 48 RLTDAAAGLLRDSGAIRLLQPRLYGGYEVHPREFAETVMGVAALDGASGWVTGIV-GVHPWELAFADPQVQEEIWGED-- 124 (414)
T ss_dssp SCCHHHHHHHHHHTGGGTTSCGGGTCCCCCHHHHHHHHHHHHHHCHHHHHHHHHH-TTHHHHHTTSCHHHHHHHHSSC--
T ss_pred CCCHHHHHHHHHCCCchhcCchhhCCCCCCHHHHHHHHHHHHhhChHHHHHHHHH-HHHHHHHHhCCHHHHHHHHccC--
Confidence 3566899999999999999999999999999999999999999988765543333 2445667788999999999982
Q ss_pred cccccccccchhhhhhhhcccc-CCceeeccceeeeecCcccC
Q psy5139 139 QTDVSRTSRGYKALEWHAFYGR-TDSLPLNDHLSHISSGCVGF 180 (216)
Q Consensus 139 ~~~lg~~~~g~~~~~~~~~~~~-~~~~~l~g~k~~va~~~~g~ 180 (216)
...+.... +. ...+..+ +++|+|||+|.|++++..++
T Consensus 125 g~~~~a~a--~t---p~t~A~~~~~g~~lnG~K~~is~a~~Ad 162 (414)
T 2or0_A 125 NDTWMASP--YA---PMGVATPVDGGYVLKGRWSFSSGTDHCQ 162 (414)
T ss_dssp TTCCEECC--CS---CCEEEEEETTEEEEEEEEEEETTGGGCS
T ss_pred CCeEEEec--cC---CCceeEEECCeEEEEeeEeccCCCchhh
Confidence 12222211 11 1223334 88999999999999987654
No 70
>2rfq_A 3-HSA hydroxylase, oxygenase; rhodococcus SP. RHA1, structural genomics protein structure initiative, midwest center for structural genomics, MCSG; HET: 1PS; 1.65A {Rhodococcus SP} PDB: 3aff_A 3afe_A
Probab=98.95 E-value=1.8e-10 Score=92.97 Aligned_cols=114 Identities=14% Similarity=0.054 Sum_probs=84.6
Q ss_pred hHHHHHHHHHHhCCceeeecCCCCCCCCccHHHHHHHHHHHHhhCCCceeEeeechhhhHHHHHhcCCHHHhhhhchhcc
Q psy5139 59 EQKEKYLPRLAQTDLMGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEKYLPRLA 138 (216)
Q Consensus 59 ~~~~~~l~~l~~g~~~~~~~~e~~gG~~~~~~~~~~v~e~lar~~~~~~~~v~~~~~~~~~~~~~~g~~~~~~~~l~~~~ 138 (216)
..+.++++.+.+.|++++.+||++||.+.+..+...+.|++++.+.++.+++..+ ......+..+|+++|++.|+++
T Consensus 35 ~~p~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eela~~~~~~~~~~~~~-~~~~~~l~~~g~~~q~~~~l~~-- 111 (394)
T 2rfq_A 35 RIPDDSMKALQETGFFRLLQPEQWGGYQADPVLFYSAVRKIASACGSTGWVSSII-GVHNWHLALFSQQAQEDVWGND-- 111 (394)
T ss_dssp SCCHHHHHHHHHHTGGGTTSCGGGTCCCCCHHHHHHHHHHHHTTCHHHHHHHHHH-HHHHHHHTTSCHHHHHHHHSSC--
T ss_pred CCCHHHHHHHHHCCCceecCchhhCCCCCCHHHHHHHHHHHHhhChhHHHHHHHH-HHHHHHHHhCCHHHHHHHhCCC--
Confidence 3566899999999999999999999999999999999999999988765443332 2344566778999999999972
Q ss_pred cccccccccchhhhhhhhcccc-CCceeeccceeeeecCcccC
Q psy5139 139 QTDVSRTSRGYKALEWHAFYGR-TDSLPLNDHLSHISSGCVGF 180 (216)
Q Consensus 139 ~~~lg~~~~g~~~~~~~~~~~~-~~~~~l~g~k~~va~~~~g~ 180 (216)
...+.... +. ...+..+ +++|+|||+|.|++++..++
T Consensus 112 g~~~~~~a--~t---p~t~A~~~~~g~~lnG~K~~is~a~~Ad 149 (394)
T 2rfq_A 112 TDVRISSS--YA---PMGAGQVVDGGYTVNGAWAWSSGCDHAS 149 (394)
T ss_dssp TTCCEEEE--CS---CSEEEEEETTEEEEEEEEEEETTGGGCS
T ss_pred CCeEEEec--cC---CCceEEEeCCeEEEeeeEeccCCCcccc
Confidence 11221111 11 1223334 88999999999999987754
No 71
>2ddh_A Acyl-COA oxidase; beta barrel, alpha UP-DOWN bundle, oxidoreductase; HET: FAD HXD; 2.07A {Rattus norvegicus} SCOP: a.29.3.2 a.29.3.2 e.6.1.2 PDB: 1is2_A*
Probab=98.68 E-value=3.1e-11 Score=103.27 Aligned_cols=73 Identities=14% Similarity=0.156 Sum_probs=52.0
Q ss_pred CCCCCCCCCHHHHHHHHHHHHccCCChhHHHHHHHhhHHHHHHhcCChhHHHHHHHHHHhCCce-eeecCCCCCCCCcc
Q psy5139 11 QEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEKYLPRLAQTDLM-GVEIPQEYGGPGLS 88 (216)
Q Consensus 11 ~~~GG~g~~~~~~~~~~ee~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~l~~g~~~-~~~~~e~~gG~~~~ 88 (216)
++|||.+ ..... +.|++.......++ ..|..++...|..+|+++|+++|+|.+.+|+++ +++++|+.+|+|+.
T Consensus 75 ~~~~~~~--~~~~~-~~~~~~~~~~~~~~--~~h~~l~~~~i~~~Gt~eq~~~~L~~i~~Ge~~g~~a~TE~g~GSd~~ 148 (661)
T 2ddh_A 75 REYGISD--PEEIM-WFKNSVHRGHPEPL--DLHLGMFLPTLLHQATAEQQERFFMPAWNLEITGTYAQTEMGHGTHLR 148 (661)
T ss_dssp HHTTCCC--HHHHH-HHHHHHHTTCCCTT--HHHHHTHHHHHC-CCCHHHHHHHHHHHHTTSSCEEEECCBTTBSSCGG
T ss_pred HHcCCCC--chHHH-HHHHHhccchhhHH--HHHHHHHHHHHHHhCCHHHHHHHHHHHhCCCeeEEEeeccCCcCcCcc
Confidence 4577765 33333 36676654333333 335556778899999999999999999999976 68999999998863
No 72
>1u8v_A Gamma-aminobutyrate metabolism dehydratase/isomerase; ALFA-helixes, beta-strands, lyase; HET: FAD; 1.60A {Clostridium aminobutyricum} SCOP: a.29.3.1 e.6.1.1
Probab=98.26 E-value=3.1e-09 Score=87.87 Aligned_cols=147 Identities=14% Similarity=0.098 Sum_probs=90.1
Q ss_pred HHHhcCC--hhHHHHHHHHHHhCCce-eeecCCCCCC--------CCc--c------------------H-----HHHHH
Q psy5139 51 LIIKLGT--TEQKEKYLPRLAQTDLM-GVEIPQEYGG--------PGL--S------------------F-----MTDIL 94 (216)
Q Consensus 51 ~l~~~g~--~~~~~~~l~~l~~g~~~-~~~~~e~~gG--------~~~--~------------------~-----~~~~~ 94 (216)
.+..+|+ ++|+++|++++.+|+++ +.+++||.+| +|. . + ..+.+
T Consensus 119 ~~~~~Gt~~~eqk~~~L~~l~~Ge~~~a~a~TEP~~~rs~~~~~gSD~~~~~~~a~r~gdg~vlnG~K~~iT~a~~Ad~~ 198 (490)
T 1u8v_A 119 IDQKYGTNYHKNFTEYLKYIQENDLIVDGAMTDPKGDRGLAPSAQKDPDLFLRIVEKREDGIVVRGAKAHQTGSINSHEH 198 (490)
T ss_dssp HHHHHCCCHHHHHHHHHHHHHHHTCCEEEECCCCCSCTTSCGGGCSSTTSSCEEEEECSSEEEEEEEECSCTTCTTCSEE
T ss_pred HHHHhCCCHHHHHHHHHHHHHhCCceeeeeeeCCCCCCcccccccCCcccceEEEEEECCEEEEEeEEEEeeCCcccCEE
Confidence 4558999 89999999999999976 7899999864 563 1 0 11333
Q ss_pred HHHHHHhhCC-------CceeEeeechh-hhH---HHH-Hh----------cCC----HHHhhhhchhc---ccccc--c
Q psy5139 95 IVEEIARVDP-------SVSILVDIQNT-LVN---DLI-IK----------LGT----TEQKEKYLPRL---AQTDV--S 143 (216)
Q Consensus 95 v~e~lar~~~-------~~~~~v~~~~~-~~~---~~~-~~----------~g~----~~~~~~~l~~~---~~~~l--g 143 (216)
++ +++++. ...|+|+.+.+ +.. .+. .+ +|. .....++|+++ .++++ |
T Consensus 199 iV--~art~~~~~~~~~~s~flVp~d~pGv~v~~~r~~~~~~~~~~~~d~~lg~~r~~~~~~~v~FddV~VP~e~vl~~g 276 (490)
T 1u8v_A 199 II--MPTIAMTEADKDYAVSFACPSDADGLFMIYGRQSCDTRKMEEGADIDLGNKQFGGQEALVVFDNVFIPNDRIFLCQ 276 (490)
T ss_dssp EE--CCSSCCCGGGGGGCEEEEEETTCTTEEEEECCCTTGGGGGSTTCCGGGSSSSCCCCCEEEEEEEEEEEGGGEEEES
T ss_pred EE--EEecCCCCCCCCeEEEEEEECCCCCEEEEecccccccccccccccCCccccccCCceEEEEECceEeCHHHccCCC
Confidence 44 565531 13478887653 211 121 11 232 12244788875 46766 6
Q ss_pred ccccchhhhhhhhccccCCceeeccceeeeec-------CcccCCCcceeeeeeccccceeeeeeccc---ccccccccc
Q psy5139 144 RTSRGYKALEWHAFYGRTDSLPLNDHLSHISS-------GCVGFDGQLKRWMVSCGLSLQILQFQNLS---SDMHMTGLA 213 (216)
Q Consensus 144 ~~~~g~~~~~~~~~~~~~~~~~l~g~k~~va~-------~~~g~~~~~~~~~~~~~fg~~i~~~Q~v~---ad~~~~~~~ 213 (216)
+++.|+......+...| ..+++ ..+|. ++.+++. || |++||.|| +||.+.+++
T Consensus 277 ~~~~g~~~~~~~~~~~r----------~~~~a~~~~~~~~~lG~----a~~~~~~-~g--i~~~q~vq~~laem~~~lea 339 (490)
T 1u8v_A 277 EYDFAGMMVERFAGYHR----------QSYGGCKVGVGDVVIGA----AALAADY-NG--AQKASHVKDKLIEMTHLNET 339 (490)
T ss_dssp CGGGHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHH----HHHHHHH-HT--CTTCHHHHHHHHHHHHHHHH
T ss_pred ChhHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHH----HHHHHHh-cC--chhcHHHHHHHHHHHHHHHH
Confidence 77777765444444443 32222 22444 4444432 55 99999999 999999998
Q ss_pred cCC
Q psy5139 214 SRF 216 (216)
Q Consensus 214 ~r~ 216 (216)
+|+
T Consensus 340 ar~ 342 (490)
T 1u8v_A 340 LYC 342 (490)
T ss_dssp HHH
T ss_pred HHH
Confidence 873
No 73
>3djl_A Protein AIDB; alpha helix, beta-barrel, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.70A {Escherichia coli} PDB: 3u33_A*
Probab=98.02 E-value=1.9e-06 Score=72.13 Aligned_cols=112 Identities=13% Similarity=0.064 Sum_probs=70.4
Q ss_pred HHHHHHHHHhCCceeeec--CCCCCCCCccHHHHHHHHHHHHhhCCCceeEeeec-hhhhHHHHHhcCCHHHhhhhchhc
Q psy5139 61 KEKYLPRLAQTDLMGVEI--PQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQ-NTLVNDLIIKLGTTEQKEKYLPRL 137 (216)
Q Consensus 61 ~~~~l~~l~~g~~~~~~~--~e~~gG~~~~~~~~~~v~e~lar~~~~~~~~v~~~-~~~~~~~~~~~g~~~~~~~~l~~~ 137 (216)
.+++++.+.+.|+.++.+ |+++||.........+. +..+... .++.. .......+..+| +++++.|++.+
T Consensus 88 ~~~~~~~l~e~Gl~~l~~~~p~~~Gg~~~~~~~~~~~----~~~~~~~--~~p~~~t~~~~~~L~~~g-~eqk~~~lp~l 160 (541)
T 3djl_A 88 WHLLMQALCTNRVHNLAWEEDARSGAFVARAARFMLH----AQVEAGS--LCPITMTFAATPLLLQML-PAPFQDWTTPL 160 (541)
T ss_dssp HHHHHHHHHHTTTTTGGGSTTCCTTHHHHHHHHHHHH----HHHCSTT--HHHHHHHHHHHHHHHHHC-CGGGGGGHHHH
T ss_pred HHHHHHHHHhCCcccCCCCCCCCCCcHHHHHHHHHHH----HHHHHhh--hcHHHHHHHHHHHHHHcC-HHHHHHHHHHH
Confidence 467888899999999988 57777543333222222 2223321 11110 123445667778 89999999987
Q ss_pred ccccc-------------------cccccchhhhhhhhcccc--CCceeeccceeeeecCcccC
Q psy5139 138 AQTDV-------------------SRTSRGYKALEWHAFYGR--TDSLPLNDHLSHISSGCVGF 180 (216)
Q Consensus 138 ~~~~l-------------------g~~~~g~~~~~~~~~~~~--~~~~~l~g~k~~va~~~~g~ 180 (216)
.++.+ .+++.|++.....++..+ +++|+|||+|.|++ +..++
T Consensus 161 ~sge~~p~~~~~~~~~g~~~~~a~TEp~~GSDl~~~~T~A~~~~~g~y~LnG~K~f~S-a~~Ad 223 (541)
T 3djl_A 161 LSDRYDSHLLPGGQKRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFS-VPQSD 223 (541)
T ss_dssp TCSCCCCCSSCGGGSSSCCEEEECCBTTBSSCGGGCCCEEEECTTSCEEEEEEEEEEE-CTTSS
T ss_pred hCCCcccccccccccccceeEEEeccCCcCCCcccceeEEEEcCCCeEEEEEEEEeec-ccccC
Confidence 65532 466777776554445444 46799999999998 55443
No 74
>2yyk_A 4-hydroxyphenylacetate-3-hydroxylase; structurome, riken spring-8 center, oxygnase component, 4- hydroxyphenylacetate 3-monooxygenase; 1.60A {Thermus thermophilus} PDB: 2yyl_A* 2yym_A* 2yyi_A* 2yyg_A* 2yyj_A*
Probab=97.65 E-value=1.7e-08 Score=83.30 Aligned_cols=145 Identities=10% Similarity=0.023 Sum_probs=83.5
Q ss_pred ChhHHHHHHHHHHhCCce-eeecCCCCCC--------CCcc--------------------HH----HHHHHHHHHHhhC
Q psy5139 57 TTEQKEKYLPRLAQTDLM-GVEIPQEYGG--------PGLS--------------------FM----TDILIVEEIARVD 103 (216)
Q Consensus 57 ~~~~~~~~l~~l~~g~~~-~~~~~e~~gG--------~~~~--------------------~~----~~~~v~e~lar~~ 103 (216)
.++|+++|++++.+|+++ +++++||.+| +|.. ++ .+.+++ +++++
T Consensus 122 ~~eqk~~~L~~l~~Ge~~~a~a~TEP~~grs~~~s~gsd~~~~~~~~~~~gdg~VlnG~K~~iT~~~Ad~~iV--~art~ 199 (481)
T 2yyk_A 122 FAENVRNYYRYLRDQDLATTHALTNPQVNRARPPSGQPDPYIPVGVVKQTEKGIVVRGARMTATFPLADEVLI--FPSIL 199 (481)
T ss_dssp GHHHHHHHHHHHHHHTCCEEEEECCCCCCTTC----CCCSCSBCEEEEECSSEEEEEEEEEEEECCCSSEEEE--CCCSC
T ss_pred HHHHHHHHHHHHHcCCeEEEEeeECCCCCCCCCccccCCcccceEEEEEECCEEEEEeEEEEeccccccEEEE--EEecC
Confidence 369999999999999975 7899999876 4531 01 123334 66664
Q ss_pred C--C----c-eeEeeechh-hhH--HHHHh---------cCCH---HHhhhhchhc---ccccc--cccccchhhh--hh
Q psy5139 104 P--S----V-SILVDIQNT-LVN--DLIIK---------LGTT---EQKEKYLPRL---AQTDV--SRTSRGYKAL--EW 154 (216)
Q Consensus 104 ~--~----~-~~~v~~~~~-~~~--~~~~~---------~g~~---~~~~~~l~~~---~~~~l--g~~~~g~~~~--~~ 154 (216)
. + . .|+|+.+.+ +.. ..... +|.+ ...+++|+++ .++++ |+++.|+... ..
T Consensus 200 ~~~~~~~~~s~flVp~dtpGv~v~~r~~~~~~~s~~d~~lg~r~~~~~~~v~FddV~VP~e~vl~~G~~~~g~~~~~~~~ 279 (481)
T 2yyk_A 200 LQAGSEKYALAFALPTSTPGLHFVCREALVGGDSPFDHPLSSRVEEMDCLVIFDDVLVPWERVFILGNVELCNNAYGATG 279 (481)
T ss_dssp CCTTCGGGCEEEEEETTCTTEEEEECCCCCCCSCTTTCTTTTTCCCCEEEEEEEEEEEEGGGEEEESCHHHHHHHHHHHT
T ss_pred CCCCCCCeEEEEEEECCCCCEEEEeccccccCCccccccccccCCCCeEEEEEccEEECHHHccCCCCccHHHHHHHHhh
Confidence 1 1 2 378887653 211 11111 1111 2234778875 56776 6665555433 33
Q ss_pred hhccccCCceeeccceeeeecCcccCCCcc---eeeeeeccccceeeeeeccc---ccccccccccCC
Q psy5139 155 HAFYGRTDSLPLNDHLSHISSGCVGFDGQL---KRWMVSCGLSLQILQFQNLS---SDMHMTGLASRF 216 (216)
Q Consensus 155 ~~~~~~~~~~~l~g~k~~va~~~~g~~~~~---~~~~~~~~fg~~i~~~Q~v~---ad~~~~~~~~r~ 216 (216)
.+...| ...++..++..+.+ ++..++ .|| |++||.|| |||.+.++++|+
T Consensus 280 ~l~~~r----------~~~~~~~~g~a~~~lg~a~~~~~-~~g--i~~~q~vq~~laem~~~leaar~ 334 (481)
T 2yyk_A 280 ALNHMA----------HQVVALKTAKTEAFLGVAALMAE-GIG--ADVYGHVQEKIAEIIVYLEAMRA 334 (481)
T ss_dssp HHHHHH----------HHHHHHHHHHHHHHHHHHHHHHH-HTT--GGGSHHHHHHHHHHHHHHHHHHH
T ss_pred cchhHH----------HHHHHHHHHHHHHHHHHHHHHHH-hcC--hhhhHHHHHHHHHHHHHHHHHHH
Confidence 334444 44444443331000 222222 255 99999999 999999998873
No 75
>3hwc_A Chlorophenol-4-monooxygenase component 2; beta barrel, helix bundle, oxidoreductase; 2.50A {Burkholderia cepacia}
Probab=97.62 E-value=4.8e-08 Score=80.89 Aligned_cols=150 Identities=9% Similarity=0.016 Sum_probs=85.9
Q ss_pred cCC--hhHHHHHHHHHHhCCce-eeecCCCCC--------CCCcc-----------------------HHHHHHHHHHHH
Q psy5139 55 LGT--TEQKEKYLPRLAQTDLM-GVEIPQEYG--------GPGLS-----------------------FMTDILIVEEIA 100 (216)
Q Consensus 55 ~g~--~~~~~~~l~~l~~g~~~-~~~~~e~~g--------G~~~~-----------------------~~~~~~v~e~la 100 (216)
+++ .+|+++|++.+.+|+++ +++++||.+ |+|.. ...+.+++ ++
T Consensus 127 ~~~~~~eq~~~~L~~l~~Ge~~~a~AltEP~~~rs~~~~~GSD~~~~~~~~~gdg~VlnG~K~~iT~a~~Ad~~lV--~a 204 (515)
T 3hwc_A 127 EGRNLTQNIHNFLKLLREKDLNCPLNFVDPQTDRSSDAAQARSPNLRIVEKTDDGIIVNGVKAVGTGIAFGDYMHI--GC 204 (515)
T ss_dssp TTCCHHHHHHHHHHHHHHTTCCCCEECCCCCCCCCSCTTTSCCSBCEEEEECSSEEEEEEEEEEEESGGGCSEEEE--CC
T ss_pred cCCCHHHHHHHHHHHHHcCCcEEEEEeeCCCCCcccccccCCCcceEEEEEECCEEEEEEEEEEECCccccCEEEE--EE
Confidence 454 47889999999999986 789999986 35541 11133444 56
Q ss_pred hhCC------CceeEeeechh-hhH-HHHHhcCCH------------HHhhhhchhc---ccccc--cccccchhhhhhh
Q psy5139 101 RVDP------SVSILVDIQNT-LVN-DLIIKLGTT------------EQKEKYLPRL---AQTDV--SRTSRGYKALEWH 155 (216)
Q Consensus 101 r~~~------~~~~~v~~~~~-~~~-~~~~~~g~~------------~~~~~~l~~~---~~~~l--g~~~~g~~~~~~~ 155 (216)
++++ -..|+|+.+.+ +.. ......|.. ....++|+++ .++++ |+++.|+..+...
T Consensus 205 ~t~~~~~~~~~s~FlVp~d~pGv~v~~~~~~~G~~~~d~~ls~~~~~~~a~v~FddV~VP~e~vl~~Ge~g~g~~~~~~~ 284 (515)
T 3hwc_A 205 LYRPGIPGEQVIFAAIPTNTPGVTVFCRESTVKNDPAEHPLASQGDELDSTTVFDNVFIPWEQVFHIGNPEHAKLYPQRI 284 (515)
T ss_dssp CCCTTCCGGGCEEEEEETTCTTEEEEECCCCCCSCTTTCTTTTSCCCCEEEEEEEEEEEEGGGEEEESCTTGGGTHHHHH
T ss_pred EecCCCCCCeEEEEEEECCCCCeEEeecccccCccccccccccccCCceEEEEECceEECHHHccCCCCccHHHHHHHHH
Confidence 6521 12378887653 111 111112210 1234678875 46777 7788887655322
Q ss_pred hccccCCceeeccceeeeecCcccCCCcceeeeeeccccceeeeeeccc---ccccccccccCC
Q psy5139 156 AFYGRTDSLPLNDHLSHISSGCVGFDGQLKRWMVSCGLSLQILQFQNLS---SDMHMTGLASRF 216 (216)
Q Consensus 156 ~~~~~~~~~~l~g~k~~va~~~~g~~~~~~~~~~~~~fg~~i~~~Q~v~---ad~~~~~~~~r~ 216 (216)
+...+ +..-..+..++...+|. ++.+++ .|| |++||+|| |||++.+|++|+
T Consensus 285 ~~~~~---r~~~~~~~~~a~~~lG~----A~~~~e-~~g--I~~fQ~Vq~kLAem~~~lEaaR~ 338 (515)
T 3hwc_A 285 FDWVH---YHILIRQVLRAELIVGL----AILITE-HIG--TSKLPTVSARVAKLVAFHLAMQA 338 (515)
T ss_dssp HHHHH---HHHHHHHHHHHHHHHHH----HHHHHH-HHT--CTTSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHH---HHHHHHHHHHHHHHHHH----HHHHHH-HcC--CcccHHHHHHHHHHHHHHHHHHH
Confidence 22110 00001123334445555 555444 355 99999999 999999998873
No 76
>1w07_A Acyl-COA oxidase; oxidoreductase, peroxisomal beta-oxidation, FAD cofactor; HET: FAD; 2.0A {Arabidopsis thaliana} SCOP: a.29.3.2 a.29.3.2 e.6.1.2 PDB: 2fon_A*
Probab=97.52 E-value=4.2e-05 Score=65.57 Aligned_cols=113 Identities=19% Similarity=0.099 Sum_probs=72.4
Q ss_pred hHHHHHHHHHHhCCceeeecCCCCCCCCccHHHHHHHHHHHHhhCCCceeEeeechhhhHHHHHhcCCHHHhhhhchhcc
Q psy5139 59 EQKEKYLPRLAQTDLMGVEIPQEYGGPGLSFMTDILIVEEIARVDPSVSILVDIQNTLVNDLIIKLGTTEQKEKYLPRLA 138 (216)
Q Consensus 59 ~~~~~~l~~l~~g~~~~~~~~e~~gG~~~~~~~~~~v~e~lar~~~~~~~~v~~~~~~~~~~~~~~g~~~~~~~~l~~~~ 138 (216)
..+++++..+.+++++.. +|+++|+ +..+..++.+++ +.++. +..+.......+..+|+++|++.|++.+.
T Consensus 57 ~~~~~~~~~l~~~g~l~~-~p~e~G~---~~~~~~~v~e~~---~~~~~--~~~~~~l~~~~l~~~Gt~eqk~~~L~~i~ 127 (659)
T 1w07_A 57 SRKELFKSTLRKCAHAFK-RIIELRL---NEEEAGRLRHFI---DQPAY--VDLHWGMFVPAIKGQGTEEQQKKWLSLAN 127 (659)
T ss_dssp CHHHHHHHHHHHHHHHHH-HHHHTTC---CHHHHHHHHHHH---CCCCH--HHHHHHTHHHHHHHHSCHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHH-hHHHhCC---CchHHHHHHHHh---ccchh--hhhHHhHHHHHHHHcCCHHHHHHHhhHHh
Confidence 356678888887777653 6666763 334444443333 34333 22332345567788999999999999986
Q ss_pred ccc------ccccccchhhh--hhhhcccc-CCceeec-----cceeeeec-CcccC
Q psy5139 139 QTD------VSRTSRGYKAL--EWHAFYGR-TDSLPLN-----DHLSHISS-GCVGF 180 (216)
Q Consensus 139 ~~~------lg~~~~g~~~~--~~~~~~~~-~~~~~l~-----g~k~~va~-~~~g~ 180 (216)
++. +.++++|++.. .+++...+ +++|+|| |+|.|+++ +..+.
T Consensus 128 ~Ge~~~~~a~TEp~~GSd~~~l~TtA~~d~~~~g~vLntP~~~G~K~~is~~a~~Ad 184 (659)
T 1w07_A 128 KMQIIGCYAQTELGHGSNVQGLETTATLDPKTDEFVIHTPTQTASKWWPGGLGKVST 184 (659)
T ss_dssp TTSSCEEEECCBTTBSSCGGGCCCEEEEETTTTEEEEECCSGGGSEECCTTTTTTCS
T ss_pred cCCEEEEEEecCCCCCCCcccceeEEEEcCCCCEEEEcCCCCCeEEEeecCCCCCCC
Confidence 653 24677777653 33333333 5789999 99999998 55443
No 77
>1u8v_A Gamma-aminobutyrate metabolism dehydratase/isomerase; ALFA-helixes, beta-strands, lyase; HET: FAD; 1.60A {Clostridium aminobutyricum} SCOP: a.29.3.1 e.6.1.1
Probab=96.51 E-value=0.00075 Score=55.80 Aligned_cols=60 Identities=15% Similarity=0.225 Sum_probs=41.5
Q ss_pred HHHhcCC--HHHhhhhchhccccc------ccccccc--------hhh-hhhhhcccc-CCceeeccceeeeecCcccC
Q psy5139 120 LIIKLGT--TEQKEKYLPRLAQTD------VSRTSRG--------YKA-LEWHAFYGR-TDSLPLNDHLSHISSGCVGF 180 (216)
Q Consensus 120 ~~~~~g~--~~~~~~~l~~~~~~~------lg~~~~g--------~~~-~~~~~~~~~-~~~~~l~g~k~~va~~~~g~ 180 (216)
....+|+ ++|++.|++.+.++. +.+|..| ++. .... ...+ +++|+|||+|.|++++..++
T Consensus 119 ~~~~~Gt~~~eqk~~~L~~l~~Ge~~~a~a~TEP~~~rs~~~~~gSD~~~~~~-~a~r~gdg~vlnG~K~~iT~a~~Ad 196 (490)
T 1u8v_A 119 IDQKYGTNYHKNFTEYLKYIQENDLIVDGAMTDPKGDRGLAPSAQKDPDLFLR-IVEKREDGIVVRGAKAHQTGSINSH 196 (490)
T ss_dssp HHHHHCCCHHHHHHHHHHHHHHHTCCEEEECCCCCSCTTSCGGGCSSTTSSCE-EEEECSSEEEEEEEECSCTTCTTCS
T ss_pred HHHHhCCCHHHHHHHHHHHHHhCCceeeeeeeCCCCCCcccccccCCcccceE-EEEEECCEEEEEeEEEEeeCCcccC
Confidence 3457899 899999999886543 2455432 342 2221 3334 88999999999999988754
No 78
>2ddh_A Acyl-COA oxidase; beta barrel, alpha UP-DOWN bundle, oxidoreductase; HET: FAD HXD; 2.07A {Rattus norvegicus} SCOP: a.29.3.2 a.29.3.2 e.6.1.2 PDB: 1is2_A*
Probab=95.76 E-value=0.0069 Score=51.96 Aligned_cols=64 Identities=19% Similarity=0.191 Sum_probs=46.0
Q ss_pred hhHHHHHhcCCHHHhhhhchhccccc------ccccccchhhh--hhhhcccc-CCceeec-----cceeeeec-Cccc
Q psy5139 116 LVNDLIIKLGTTEQKEKYLPRLAQTD------VSRTSRGYKAL--EWHAFYGR-TDSLPLN-----DHLSHISS-GCVG 179 (216)
Q Consensus 116 ~~~~~~~~~g~~~~~~~~l~~~~~~~------lg~~~~g~~~~--~~~~~~~~-~~~~~l~-----g~k~~va~-~~~g 179 (216)
.....+..+|+++|++.|++.+.++. +.++++|++.. .+++...+ +++|+|| |+|.|+++ +..+
T Consensus 106 l~~~~i~~~Gt~eq~~~~L~~i~~Ge~~g~~a~TE~g~GSd~~~l~TtA~~d~~~~~~vLntP~~~G~K~wis~~a~~A 184 (661)
T 2ddh_A 106 MFLPTLLHQATAEQQERFFMPAWNLEITGTYAQTEMGHGTHLRGLETTATYDPKTQEFILNSPTVTSIKWWPGGLGKTS 184 (661)
T ss_dssp THHHHHC-CCCHHHHHHHHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEEETTTTEEEEECCSSTTSEECCTTTTTTC
T ss_pred HHHHHHHHhCCHHHHHHHHHHHhCCCeeEEEeeccCCcCcCcccceeEEEEcCCCCeEEEcCCCCCeEEEecCCCcccC
Confidence 55677888999999999999886653 24667787653 34444433 6789999 99999998 5443
No 79
>2yyk_A 4-hydroxyphenylacetate-3-hydroxylase; structurome, riken spring-8 center, oxygnase component, 4- hydroxyphenylacetate 3-monooxygenase; 1.60A {Thermus thermophilus} PDB: 2yyl_A* 2yym_A* 2yyi_A* 2yyg_A* 2yyj_A*
Probab=95.36 E-value=0.0071 Score=49.88 Aligned_cols=54 Identities=7% Similarity=0.023 Sum_probs=35.3
Q ss_pred CHHHhhhhchhccccc------ccccccc--------hhh-hhhhhccccCCceeeccceeeeecCcccC
Q psy5139 126 TTEQKEKYLPRLAQTD------VSRTSRG--------YKA-LEWHAFYGRTDSLPLNDHLSHISSGCVGF 180 (216)
Q Consensus 126 ~~~~~~~~l~~~~~~~------lg~~~~g--------~~~-~~~~~~~~~~~~~~l~g~k~~va~~~~g~ 180 (216)
..+|++.|++.+.++. +.+++.| ++. +..+.....+|+|+|||+|.|+++ ..++
T Consensus 122 ~~eqk~~~L~~l~~Ge~~~a~a~TEP~~grs~~~s~gsd~~~~~~~~~~~gdg~VlnG~K~~iT~-~~Ad 190 (481)
T 2yyk_A 122 FAENVRNYYRYLRDQDLATTHALTNPQVNRARPPSGQPDPYIPVGVVKQTEKGIVVRGARMTATF-PLAD 190 (481)
T ss_dssp GHHHHHHHHHHHHHHTCCEEEEECCCCCCTTC----CCCSCSBCEEEEECSSEEEEEEEEEEEEC-CCSS
T ss_pred HHHHHHHHHHHHHcCCeEEEEeeECCCCCCCCCccccCCcccceEEEEEECCEEEEEeEEEEecc-cccc
Confidence 4588999999886543 3455544 333 122222123889999999999999 7654
No 80
>3hwc_A Chlorophenol-4-monooxygenase component 2; beta barrel, helix bundle, oxidoreductase; 2.50A {Burkholderia cepacia}
Probab=94.82 E-value=0.014 Score=48.42 Aligned_cols=52 Identities=12% Similarity=0.088 Sum_probs=35.0
Q ss_pred HHhhhhchhccccc------cccccc--------chhhhhhhhccccCCceeeccceeeeecCcccC
Q psy5139 128 EQKEKYLPRLAQTD------VSRTSR--------GYKALEWHAFYGRTDSLPLNDHLSHISSGCVGF 180 (216)
Q Consensus 128 ~~~~~~l~~~~~~~------lg~~~~--------g~~~~~~~~~~~~~~~~~l~g~k~~va~~~~g~ 180 (216)
++++.|++.+.++. +.+++. |++. .......++++|+|||+|.|++++..++
T Consensus 133 eq~~~~L~~l~~Ge~~~a~AltEP~~~rs~~~~~GSD~-~~~~~~~~gdg~VlnG~K~~iT~a~~Ad 198 (515)
T 3hwc_A 133 QNIHNFLKLLREKDLNCPLNFVDPQTDRSSDAAQARSP-NLRIVEKTDDGIIVNGVKAVGTGIAFGD 198 (515)
T ss_dssp HHHHHHHHHHHHTTCCCCEECCCCCCCCCSCTTTSCCS-BCEEEEECSSEEEEEEEEEEEESGGGCS
T ss_pred HHHHHHHHHHHcCCcEEEEEeeCCCCCcccccccCCCc-ceEEEEEECCEEEEEEEEEEECCccccC
Confidence 77788999886653 234443 3444 2222222388999999999999988765
No 81
>4g5e_A 2,4,6-trichlorophenol 4-monooxygenase; oxidoreductase; 2.50A {Cupriavidus necator JMP134}
Probab=66.16 E-value=2.4 Score=35.21 Aligned_cols=20 Identities=0% Similarity=-0.160 Sum_probs=18.3
Q ss_pred CCceeeccceeeeecCcccC
Q psy5139 161 TDSLPLNDHLSHISSGCVGF 180 (216)
Q Consensus 161 ~~~~~l~g~k~~va~~~~g~ 180 (216)
++||+|||.|.|++++..++
T Consensus 180 ~dGiVVnGaK~~~T~a~~Ad 199 (517)
T 4g5e_A 180 DKGIVVSGVKAIGTGVAFAD 199 (517)
T ss_dssp SSEEEEEEEEEEEESGGGCS
T ss_pred CCeEEEeeEehhhcCccccC
Confidence 88999999999999988765
No 82
>4g5e_A 2,4,6-trichlorophenol 4-monooxygenase; oxidoreductase; 2.50A {Cupriavidus necator JMP134}
Probab=60.60 E-value=0.059 Score=44.79 Aligned_cols=19 Identities=5% Similarity=-0.125 Sum_probs=17.5
Q ss_pred eeeeeccc---ccccccccccC
Q psy5139 197 ILQFQNLS---SDMHMTGLASR 215 (216)
Q Consensus 197 i~~~Q~v~---ad~~~~~~~~r 215 (216)
|.+||+|| +||.+.+|++|
T Consensus 317 i~~fq~Vq~kLaEm~~~~E~~r 338 (517)
T 4g5e_A 317 TNKIPAVQTRVAKLIGFHQAML 338 (517)
T ss_dssp CTTSHHHHHHHHHHHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHHHHHH
Confidence 99999999 99999998876
Done!