BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5140
(120 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9DBL1|ACDSB_MOUSE Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial
OS=Mus musculus GN=Acadsb PE=1 SV=1
Length = 432
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/79 (59%), Positives = 56/79 (70%), Gaps = 1/79 (1%)
Query: 29 QKMESEEKIDETVLKTLFESGAGSFALSEPGSGSDAFAMKTTATKDGNHYILNGSKMWIS 88
+K SEE+ T L L GSF LSE G+GSD+FAMKT A K GN+Y+LNGSKMWIS
Sbjct: 151 RKHASEEQ-KATYLPKLVTEKLGSFCLSEAGAGSDSFAMKTRADKSGNYYVLNGSKMWIS 209
Query: 89 NADIANIFLVMANVDVSKG 107
+A+ A +FLV ANVD S G
Sbjct: 210 HAEHAELFLVFANVDPSSG 228
Score = 32.3 bits (72), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 28/49 (57%)
Query: 16 IAKLAKETIAPYVQKMESEEKIDETVLKTLFESGAGSFALSEPGSGSDA 64
+ K A+E +AP V M+ K++++V++ LF+ G + G++A
Sbjct: 68 VKKFAQEHVAPLVSSMDENSKMEKSVIQGLFQQGLMGIEVEAQYGGTEA 116
>sp|P45954|ACDSB_HUMAN Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial
OS=Homo sapiens GN=ACADSB PE=1 SV=1
Length = 432
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/93 (48%), Positives = 63/93 (67%), Gaps = 1/93 (1%)
Query: 15 IIAKLAKETIAPYVQKMESEEKIDETVLKTLFESGAGSFALSEPGSGSDAFAMKTTATKD 74
+ ++ I ++K +EE+ T L L GSF LSE G+GSD+FA+KT A K+
Sbjct: 137 VFCEIQNTLINTLIRKHGTEEQ-KATYLPQLTTEKVGSFCLSEAGAGSDSFALKTRADKE 195
Query: 75 GNHYILNGSKMWISNADIANIFLVMANVDVSKG 107
G++Y+LNGSKMWIS+A+ A +FLVMANVD + G
Sbjct: 196 GDYYVLNGSKMWISSAEHAGLFLVMANVDPTIG 228
Score = 33.1 bits (74), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 23/34 (67%)
Query: 16 IAKLAKETIAPYVQKMESEEKIDETVLKTLFESG 49
+ K A+E IAP V M+ K++++V++ LF+ G
Sbjct: 68 VKKFAQEQIAPLVSTMDENSKMEKSVIQGLFQQG 101
>sp|Q5RF40|ACDSB_PONAB Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial
OS=Pongo abelii GN=ACADSB PE=2 SV=1
Length = 432
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/93 (48%), Positives = 63/93 (67%), Gaps = 1/93 (1%)
Query: 15 IIAKLAKETIAPYVQKMESEEKIDETVLKTLFESGAGSFALSEPGSGSDAFAMKTTATKD 74
+ ++ I ++K +EE+ T L L GSF LSE G+GSD+FA+KT A K+
Sbjct: 137 VFCEIQNTLINTLIRKHGTEEQ-KGTYLPQLTTEKVGSFCLSEAGAGSDSFALKTRADKE 195
Query: 75 GNHYILNGSKMWISNADIANIFLVMANVDVSKG 107
G++Y+LNGSKMWIS+A+ A +FLVMANVD + G
Sbjct: 196 GDYYVLNGSKMWISSAEHAGLFLVMANVDPTIG 228
Score = 33.1 bits (74), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 23/34 (67%)
Query: 16 IAKLAKETIAPYVQKMESEEKIDETVLKTLFESG 49
+ K A+E IAP V M+ K++++V++ LF+ G
Sbjct: 68 VKKFAQEQIAPLVSTMDENSKMEKSVIQGLFQQG 101
>sp|P70584|ACDSB_RAT Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial
OS=Rattus norvegicus GN=Acadsb PE=1 SV=1
Length = 432
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/93 (48%), Positives = 59/93 (63%), Gaps = 1/93 (1%)
Query: 15 IIAKLAKETIAPYVQKMESEEKIDETVLKTLFESGAGSFALSEPGSGSDAFAMKTTATKD 74
++ + I +K +EE+ T L L GSF LSE G+GSD+FA+KT A K
Sbjct: 137 LLCDIQNTVINKLFRKHGTEEQ-KATYLPKLVTEKLGSFCLSEAGAGSDSFALKTRADKS 195
Query: 75 GNHYILNGSKMWISNADIANIFLVMANVDVSKG 107
GN+Y++NGSKMWISNA+ A +FLV ANVD G
Sbjct: 196 GNYYVINGSKMWISNAEHAELFLVFANVDPPSG 228
Score = 33.1 bits (74), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 28/49 (57%)
Query: 16 IAKLAKETIAPYVQKMESEEKIDETVLKTLFESGAGSFALSEPGSGSDA 64
+ K A+E IAP V M+ K++++V++ LF+ G + G++A
Sbjct: 68 VKKFAQEQIAPLVSTMDENSKMEKSVIQGLFQQGMMGIEVEAKYGGTEA 116
>sp|Q5EAD4|ACDSB_BOVIN Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial
OS=Bos taurus GN=ACADSB PE=2 SV=1
Length = 432
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 60/93 (64%), Gaps = 1/93 (1%)
Query: 15 IIAKLAKETIAPYVQKMESEEKIDETVLKTLFESGAGSFALSEPGSGSDAFAMKTTATKD 74
++ + I + K +EE+ T L L A S +SE G+GSD+FAMKT A K
Sbjct: 137 LVCDIQNTLINRMIGKYGTEEQ-KATYLPKLATEKASSICISETGAGSDSFAMKTRADKK 195
Query: 75 GNHYILNGSKMWISNADIANIFLVMANVDVSKG 107
G++YI+NGSKMWIS+A+IA +F+VMAN D S G
Sbjct: 196 GDYYIINGSKMWISSAEIAGLFVVMANADFSAG 228
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 26/34 (76%)
Query: 16 IAKLAKETIAPYVQKMESEEKIDETVLKTLFESG 49
+ K A+E +AP+V KM+ + K++++V++ LF+ G
Sbjct: 68 VKKFAQEQVAPFVSKMDEDSKMEKSVIQGLFQQG 101
>sp|Q54RR5|ACDSB_DICDI Probable short/branched chain specific acyl-CoA dehydrogenase
OS=Dictyostelium discoideum GN=acadsb PE=3 SV=1
Length = 413
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
Query: 39 ETVLKTLFESGAGSFALSEPGSGSDAFAMKTTATKDGN-HYILNGSKMWISNADIANIFL 97
E L L + GSF LSE GSGSDAFA+ T A + + ++LNG+K WI+NA A +F+
Sbjct: 138 EKYLSMLATNTVGSFCLSESGSGSDAFALATRAVRQSDGTFVLNGTKQWITNAKEAGVFI 197
Query: 98 VMANVDVSKG 107
VMANVD S+G
Sbjct: 198 VMANVDPSQG 207
>sp|P45867|ACDA_BACSU Acyl-CoA dehydrogenase OS=Bacillus subtilis (strain 168) GN=acdA
PE=2 SV=1
Length = 379
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 52/76 (68%)
Query: 33 SEEKIDETVLKTLFESGAGSFALSEPGSGSDAFAMKTTATKDGNHYILNGSKMWISNADI 92
+EE+ E + + G+FAL+E GSGSDA +MKTTA + G+ Y+LNGSK++I+N +
Sbjct: 103 TEEQKTEYLTQLALGEKIGAFALTEAGSGSDAGSMKTTAERIGDDYVLNGSKVFITNGGV 162
Query: 93 ANIFLVMANVDVSKGK 108
A+I++V A D K K
Sbjct: 163 ADIYIVFAVTDPEKKK 178
>sp|P26440|IVD_HUMAN Isovaleryl-CoA dehydrogenase, mitochondrial OS=Homo sapiens GN=IVD
PE=1 SV=1
Length = 423
Score = 69.3 bits (168), Expect = 7e-12, Method: Composition-based stats.
Identities = 30/67 (44%), Positives = 45/67 (67%)
Query: 51 GSFALSEPGSGSDAFAMKTTATKDGNHYILNGSKMWISNADIANIFLVMANVDVSKGKVT 110
G+ A+SEP +GSD +MK A K GNHYILNG+K WI+N A++ +V A D++ +
Sbjct: 160 GALAMSEPNAGSDVVSMKLKAEKKGNHYILNGNKFWITNGPDADVLIVYAKTDLAAVPAS 219
Query: 111 KGLFSSI 117
+G+ + I
Sbjct: 220 RGITAFI 226
>sp|Q5RBD5|IVD_PONAB Isovaleryl-CoA dehydrogenase, mitochondrial OS=Pongo abelii GN=IVD
PE=2 SV=1
Length = 423
Score = 69.3 bits (168), Expect = 7e-12, Method: Composition-based stats.
Identities = 30/67 (44%), Positives = 45/67 (67%)
Query: 51 GSFALSEPGSGSDAFAMKTTATKDGNHYILNGSKMWISNADIANIFLVMANVDVSKGKVT 110
G+ A+SEP +GSD +MK A K GNHYILNG+K WI+N A++ +V A D++ +
Sbjct: 160 GALAMSEPNAGSDVVSMKLKAEKKGNHYILNGNKFWITNGPDADVLIVYAKTDLAAVPAS 219
Query: 111 KGLFSSI 117
+G+ + I
Sbjct: 220 RGITAFI 226
>sp|Q54IM8|ACAD8_DICDI Isobutyryl-CoA dehydrogenase, mitochondrial OS=Dictyostelium
discoideum GN=acad8 PE=3 SV=1
Length = 416
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 40/56 (71%)
Query: 52 SFALSEPGSGSDAFAMKTTATKDGNHYILNGSKMWISNADIANIFLVMANVDVSKG 107
S+ L+EPGSGSDA ++ T ATKDG+HYILNGSK +IS + ++LVM KG
Sbjct: 155 SYCLTEPGSGSDAGSLSTKATKDGDHYILNGSKAFISGGGDSEVYLVMVRTGAEKG 210
>sp|Q3SZI8|IVD_BOVIN Isovaleryl-CoA dehydrogenase, mitochondrial OS=Bos taurus GN=IVD
PE=2 SV=1
Length = 426
Score = 67.8 bits (164), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/67 (43%), Positives = 45/67 (67%)
Query: 51 GSFALSEPGSGSDAFAMKTTATKDGNHYILNGSKMWISNADIANIFLVMANVDVSKGKVT 110
G+ A+SEP +GSD +MK A K G+HY+LNG+K WI+N A++ +V A DV+ +
Sbjct: 163 GALAMSEPNAGSDVVSMKLKAEKKGDHYVLNGNKFWITNGPDADVLVVYAKTDVTAVPAS 222
Query: 111 KGLFSSI 117
+G+ + I
Sbjct: 223 RGITAFI 229
>sp|Q9H845|ACAD9_HUMAN Acyl-CoA dehydrogenase family member 9, mitochondrial OS=Homo
sapiens GN=ACAD9 PE=1 SV=1
Length = 621
Score = 67.0 bits (162), Expect = 3e-11, Method: Composition-based stats.
Identities = 42/99 (42%), Positives = 56/99 (56%), Gaps = 17/99 (17%)
Query: 15 IIAKLAKETIAPYVQKMESEEKIDETVLKTLFESGAGSFALSEPGSGSDAFAMKTTAT-- 72
II +E A Y+ K+ S E I +F L+EP SGSDA ++++ AT
Sbjct: 153 IILAGTEEQKAKYLPKLASGEHI-------------AAFCLTEPASGSDAASIRSRATLS 199
Query: 73 KDGNHYILNGSKMWISNADIANIFLVMANVDV--SKGKV 109
+D HYILNGSK+WI+N +ANIF V A +V S G V
Sbjct: 200 EDKKHYILNGSKVWITNGGLANIFTVFAKTEVVDSDGSV 238
>sp|P63427|ACDP_MYCTU Probable acyl-CoA dehydrogenase fadE25 OS=Mycobacterium
tuberculosis GN=fadE25 PE=3 SV=1
Length = 389
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 65/118 (55%), Gaps = 15/118 (12%)
Query: 5 YKGLGRDRLN---IIAKLAK----ETIAPYVQKM-------ESEEKIDETVLKTLFESGA 50
Y G G D + +I ++A+ ++ P V K+ E++ + VL L GA
Sbjct: 69 YGGQGADSVATCIVIEEVARVDASASLIPAVNKLGTMGLILRGSEELKKQVLPALAAEGA 128
Query: 51 -GSFALSEPGSGSDAFAMKTTATKDGNHYILNGSKMWISNADIANIFLVMANVDVSKG 107
S+ALSE +GSDA +M+T A DG+H+ILNG+K WI+N + + VMA D +G
Sbjct: 129 MASYALSEREAGSDAASMRTRAKADGDHWILNGAKCWITNGGKSTWYTVMAVTDPDRG 186
>sp|P63428|ACDP_MYCBO Probable acyl-CoA dehydrogenase fadE25 OS=Mycobacterium bovis
(strain ATCC BAA-935 / AF2122/97) GN=fadE25 PE=3 SV=1
Length = 389
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 65/118 (55%), Gaps = 15/118 (12%)
Query: 5 YKGLGRDRLN---IIAKLAK----ETIAPYVQKM-------ESEEKIDETVLKTLFESGA 50
Y G G D + +I ++A+ ++ P V K+ E++ + VL L GA
Sbjct: 69 YGGQGADSVATCIVIEEVARVDASASLIPAVNKLGTMGLILRGSEELKKQVLPALAAEGA 128
Query: 51 -GSFALSEPGSGSDAFAMKTTATKDGNHYILNGSKMWISNADIANIFLVMANVDVSKG 107
S+ALSE +GSDA +M+T A DG+H+ILNG+K WI+N + + VMA D +G
Sbjct: 129 MASYALSEREAGSDAASMRTRAKADGDHWILNGAKCWITNGGKSTWYTVMAVTDPDRG 186
>sp|Q9JHI5|IVD_MOUSE Isovaleryl-CoA dehydrogenase, mitochondrial OS=Mus musculus GN=Ivd
PE=1 SV=1
Length = 424
Score = 67.0 bits (162), Expect = 3e-11, Method: Composition-based stats.
Identities = 29/67 (43%), Positives = 45/67 (67%)
Query: 51 GSFALSEPGSGSDAFAMKTTATKDGNHYILNGSKMWISNADIANIFLVMANVDVSKGKVT 110
G+ A+SEP +GSD +MK A K G+HY+LNG+K WI+N A+I +V A D++ +
Sbjct: 161 GALAMSEPNAGSDVVSMKLKAEKKGDHYVLNGNKFWITNGPDADILVVYAKTDLTAVPAS 220
Query: 111 KGLFSSI 117
+G+ + I
Sbjct: 221 RGITAFI 227
>sp|O32176|FADE_BACSU Probable acyl-CoA dehydrogenase OS=Bacillus subtilis (strain 168)
GN=fadE PE=2 SV=1
Length = 594
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 40/57 (70%), Gaps = 2/57 (3%)
Query: 52 SFALSEPGSGSDAFAMKTTAT--KDGNHYILNGSKMWISNADIANIFLVMANVDVSK 106
++AL+EPGSGSDA KTTA + G HY+L G K WI+N+ A++F+V A VD K
Sbjct: 147 AYALTEPGSGSDALGAKTTAVLNEAGTHYVLTGEKQWITNSAFADVFVVYAKVDGDK 203
>sp|P12007|IVD_RAT Isovaleryl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus
GN=Ivd PE=1 SV=2
Length = 424
Score = 65.5 bits (158), Expect = 8e-11, Method: Composition-based stats.
Identities = 27/67 (40%), Positives = 45/67 (67%)
Query: 51 GSFALSEPGSGSDAFAMKTTATKDGNHYILNGSKMWISNADIANIFLVMANVDVSKGKVT 110
G+ A+SEP +GSD +M+ A K G+HY+LNG+K WI+N A++ +V A D++ +
Sbjct: 161 GALAMSEPNAGSDVVSMRLKAEKKGDHYVLNGNKFWITNGPDADVLVVYAKTDLTAVPAS 220
Query: 111 KGLFSSI 117
+G+ + I
Sbjct: 221 RGITAFI 227
>sp|P79274|ACADL_PIG Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Sus
scrofa GN=ACADL PE=2 SV=1
Length = 430
Score = 65.5 bits (158), Expect = 9e-11, Method: Composition-based stats.
Identities = 30/82 (36%), Positives = 53/82 (64%)
Query: 19 LAKETIAPYVQKMESEEKIDETVLKTLFESGAGSFALSEPGSGSDAFAMKTTATKDGNHY 78
L + + PY+ SEE+I + + G+ A++EPG+GSD ++T A KDG+ +
Sbjct: 136 LHSDIVMPYIANYGSEEQIKHFIPQMTAGKCIGAIAMTEPGAGSDLQGVRTNAKKDGSDW 195
Query: 79 ILNGSKMWISNADIANIFLVMA 100
ILNGSK++I+N ++++ +V+A
Sbjct: 196 ILNGSKVFITNGWLSDVVIVVA 217
>sp|Q8JZN5|ACAD9_MOUSE Acyl-CoA dehydrogenase family member 9, mitochondrial OS=Mus
musculus GN=Acad9 PE=2 SV=2
Length = 625
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 51/86 (59%), Gaps = 15/86 (17%)
Query: 21 KETIAPYVQKMESEEKIDETVLKTLFESGAGSFALSEPGSGSDAFAMKTTAT--KDGNHY 78
+E A Y+ K+ S E I +F L+EP SGSDA +++T AT +D ++
Sbjct: 163 EEQKAKYLPKLSSGEHI-------------AAFCLTEPASGSDAASIQTRATLSEDKKYF 209
Query: 79 ILNGSKMWISNADIANIFLVMANVDV 104
ILNGSK+WI+N +ANIF V A +V
Sbjct: 210 ILNGSKVWITNGGLANIFTVFAKTEV 235
>sp|P52042|ACDS_CLOAB Acyl-CoA dehydrogenase, short-chain specific OS=Clostridium
acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 /
LMG 5710 / VKM B-1787) GN=bcd PE=3 SV=1
Length = 379
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 49/67 (73%), Gaps = 2/67 (2%)
Query: 51 GSFALSEPGSGSDAFAMKTTATKDGNHYILNGSKMWISNADIANIFLVMANVDVSKGKVT 110
G++ L+EP +G+D+ A +T A +G+HY++NGSK++I+N +A+ F++ A D +KG T
Sbjct: 121 GAYGLTEPNAGTDSGAQQTVAVLEGDHYVINGSKIFITNGGVADTFVIFAMTDRTKG--T 178
Query: 111 KGLFSSI 117
KG+ + I
Sbjct: 179 KGISAFI 185
>sp|P28330|ACADL_HUMAN Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Homo
sapiens GN=ACADL PE=2 SV=2
Length = 430
Score = 63.9 bits (154), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/77 (38%), Positives = 50/77 (64%)
Query: 24 IAPYVQKMESEEKIDETVLKTLFESGAGSFALSEPGSGSDAFAMKTTATKDGNHYILNGS 83
+ Y+ SEE+I + + G+ A++EPG+GSD +KT A KDG+ +ILNGS
Sbjct: 141 VMSYITNHGSEEQIKHFIPQMTAGKCIGAIAMTEPGAGSDLQGIKTNAKKDGSDWILNGS 200
Query: 84 KMWISNADIANIFLVMA 100
K++ISN ++++ +V+A
Sbjct: 201 KVFISNGSLSDVVIVVA 217
>sp|Q07417|ACADS_MOUSE Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Mus
musculus GN=Acads PE=2 SV=2
Length = 412
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 42/56 (75%)
Query: 51 GSFALSEPGSGSDAFAMKTTATKDGNHYILNGSKMWISNADIANIFLVMANVDVSK 106
G FALSEPG+GSDA A TTA ++G+ ++LNG+K WI+N+ A+ +V A+ D S+
Sbjct: 150 GCFALSEPGNGSDAGAASTTAREEGDSWVLNGTKAWITNSWEASATVVFASTDRSR 205
>sp|P15651|ACADS_RAT Short-chain specific acyl-CoA dehydrogenase, mitochondrial
OS=Rattus norvegicus GN=Acads PE=1 SV=2
Length = 412
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 42/56 (75%)
Query: 51 GSFALSEPGSGSDAFAMKTTATKDGNHYILNGSKMWISNADIANIFLVMANVDVSK 106
G FALSEPG+GSDA A TTA ++G+ ++LNG+K WI+N+ A+ +V A+ D S+
Sbjct: 150 GCFALSEPGNGSDAGAASTTAREEGDSWVLNGTKAWITNSWEASATVVFASTDRSR 205
>sp|Q5RAS0|ACADS_PONAB Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Pongo
abelii GN=ACADS PE=2 SV=1
Length = 412
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 57/95 (60%), Gaps = 5/95 (5%)
Query: 28 VQKMESEEKIDETVLKTLFESG--AGSFALSEPGSGSDAFAMKTTATKDGNHYILNGSKM 85
+ K S+E+ + V T F SG G FALSEPG+GSDA A TTA +G+ ++LNG+K
Sbjct: 127 ILKFGSKEQKQKWV--TPFTSGDKIGCFALSEPGNGSDAGAASTTARAEGDSWVLNGTKA 184
Query: 86 WISNADIANIFLVMANVDVS-KGKVTKGLFSSIPT 119
WI+NA A+ +V A+ D + + K +PT
Sbjct: 185 WITNAWEASAAVVFASTDRALQNKGISAFLVPMPT 219
>sp|P46703|ACDP_MYCLE Probable acyl-CoA dehydrogenase fadE25 OS=Mycobacterium leprae
(strain TN) GN=fadE25 PE=3 SV=1
Length = 389
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 64/118 (54%), Gaps = 15/118 (12%)
Query: 5 YKGLGRDRLN---IIAKLAK----ETIAPYVQKM-------ESEEKIDETVLKTLFESGA 50
Y G G D + +I ++A+ ++ P V K+ E++ + VL +L GA
Sbjct: 69 YGGQGADSVAACIVIEEVARVDASASLIPAVNKLGTMGLILRGSEELKKQVLPSLAAEGA 128
Query: 51 -GSFALSEPGSGSDAFAMKTTATKDGNHYILNGSKMWISNADIANIFLVMANVDVSKG 107
S+ALSE +GSDA +M+T A DG+ +ILNG K WI+N + + VMA D KG
Sbjct: 129 MASYALSEREAGSDAASMRTRAKADGDDWILNGFKCWITNGGKSTWYTVMAVTDPDKG 186
>sp|Q9UKU7|ACAD8_HUMAN Isobutyryl-CoA dehydrogenase, mitochondrial OS=Homo sapiens
GN=ACAD8 PE=1 SV=1
Length = 415
Score = 62.4 bits (150), Expect = 8e-10, Method: Composition-based stats.
Identities = 28/49 (57%), Positives = 39/49 (79%)
Query: 51 GSFALSEPGSGSDAFAMKTTATKDGNHYILNGSKMWISNADIANIFLVM 99
S+ L+EPGSGSDA ++ T+A K G+HYILNGSK +IS A ++I++VM
Sbjct: 156 ASYCLTEPGSGSDAASLLTSAKKQGDHYILNGSKAFISGAGESDIYVVM 204
>sp|P16219|ACADS_HUMAN Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Homo
sapiens GN=ACADS PE=1 SV=1
Length = 412
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 49/79 (62%), Gaps = 3/79 (3%)
Query: 44 TLFESG--AGSFALSEPGSGSDAFAMKTTATKDGNHYILNGSKMWISNADIANIFLVMAN 101
T F SG G FALSEPG+GSDA A TTA +G+ ++LNG+K WI+NA A+ +V A+
Sbjct: 141 TPFTSGDKIGCFALSEPGNGSDAGAASTTARAEGDSWVLNGTKAWITNAWEASAAVVFAS 200
Query: 102 VDVS-KGKVTKGLFSSIPT 119
D + + K +PT
Sbjct: 201 TDRALQNKGISAFLVPMPT 219
>sp|C3UVB0|ACD_DESML Glutaryl-CoA dehydrogenase OS=Desulfococcus multivorans GN=Acd PE=1
SV=1
Length = 389
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 42/63 (66%), Gaps = 2/63 (3%)
Query: 51 GSFALSEPGSGSDAFAMKTTATKDGNHYILNGSKMWISNADIANIFLVMANVDVSKGKVT 110
G F ++EP +GSD AM +TA G+H++LNGSK WISNA A++ + A D + G +
Sbjct: 124 GGFGITEPDAGSDVMAMSSTAEDKGDHWLLNGSKTWISNAAQADVLIYYAYTDKAAG--S 181
Query: 111 KGL 113
+GL
Sbjct: 182 RGL 184
>sp|Q9VSA3|ACADM_DROME Probable medium-chain specific acyl-CoA dehydrogenase,
mitochondrial OS=Drosophila melanogaster GN=CG12262 PE=1
SV=1
Length = 419
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 40/61 (65%)
Query: 43 KTLFESGAGSFALSEPGSGSDAFAMKTTATKDGNHYILNGSKMWISNADIANIFLVMANV 102
+ L E ++ ++EPG+GSD +KT A K G+ +++NG KMWI+N +AN + V+A
Sbjct: 144 RLLEEPLVAAYCVTEPGAGSDVSGIKTRAEKKGDEWVINGQKMWITNGGVANWYFVLART 203
Query: 103 D 103
+
Sbjct: 204 N 204
>sp|P49748|ACADV_HUMAN Very long-chain specific acyl-CoA dehydrogenase, mitochondrial
OS=Homo sapiens GN=ACADVL PE=1 SV=1
Length = 655
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 52 SFALSEPGSGSDAFAMKTTATKD--GNHYILNGSKMWISNADIANIFLVMANVDVS 105
+F L+EP SGSDA +++T+A G +Y LNGSK+WISN +A+IF V A V+
Sbjct: 213 AFCLTEPSSGSDAASIRTSAVPSPCGKYYTLNGSKLWISNGGLADIFTVFAKTPVT 268
>sp|Q8HXY7|ACADV_MACFA Very long-chain specific acyl-CoA dehydrogenase, mitochondrial
OS=Macaca fascicularis GN=ACADVL PE=2 SV=1
Length = 655
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 52 SFALSEPGSGSDAFAMKTTATKD--GNHYILNGSKMWISNADIANIFLVMANVDVS 105
+F L+EP SGSDA +++T+A G +Y LNGSK+WISN +A+IF V A V+
Sbjct: 213 AFCLTEPSSGSDAASIRTSAVPSPCGKYYTLNGSKLWISNGGLADIFTVFAKTPVT 268
>sp|P15650|ACADL_RAT Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus
norvegicus GN=Acadl PE=1 SV=1
Length = 430
Score = 59.7 bits (143), Expect = 5e-09, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 54/82 (65%)
Query: 19 LAKETIAPYVQKMESEEKIDETVLKTLFESGAGSFALSEPGSGSDAFAMKTTATKDGNHY 78
L + + PY+ ++E+I++ + + G+ A++EPG+GSD ++T A + G+ +
Sbjct: 136 LHSDIVMPYIANYGTKEQIEQFIPQMTAGKCIGAIAMTEPGAGSDLQGVRTNAKRSGSDW 195
Query: 79 ILNGSKMWISNADIANIFLVMA 100
ILNGSK++I+N ++++ +V+A
Sbjct: 196 ILNGSKVFITNGWLSDLVIVVA 217
>sp|Q9D7B6|ACAD8_MOUSE Isobutyryl-CoA dehydrogenase, mitochondrial OS=Mus musculus
GN=Acad8 PE=2 SV=2
Length = 413
Score = 59.7 bits (143), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/58 (48%), Positives = 40/58 (68%)
Query: 51 GSFALSEPGSGSDAFAMKTTATKDGNHYILNGSKMWISNADIANIFLVMANVDVSKGK 108
S+ L+EPGSGSDA ++ T+A + G+HYILNGSK +IS ++I++VM S K
Sbjct: 154 ASYCLTEPGSGSDAASLLTSAKQQGDHYILNGSKAFISGGGESDIYVVMCRTGGSGAK 211
>sp|P51174|ACADL_MOUSE Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Mus
musculus GN=Acadl PE=2 SV=2
Length = 430
Score = 59.3 bits (142), Expect = 6e-09, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 54/82 (65%)
Query: 19 LAKETIAPYVQKMESEEKIDETVLKTLFESGAGSFALSEPGSGSDAFAMKTTATKDGNHY 78
L + + PY+ ++E+I++ + + G+ A++EPG+GSD ++T A + G+ +
Sbjct: 136 LHSDIVMPYIANYGTKEQIEKFIPQMTAGKCIGAIAMTEPGAGSDLQGVRTNAKRSGSDW 195
Query: 79 ILNGSKMWISNADIANIFLVMA 100
ILNGSK++I+N ++++ +V+A
Sbjct: 196 ILNGSKVFITNGWLSDLVIVVA 217
>sp|Q9FS88|IVD1_SOLTU Isovaleryl-CoA dehydrogenase 1, mitochondrial OS=Solanum tuberosum
GN=IVD1 PE=2 SV=1
Length = 412
Score = 59.3 bits (142), Expect = 6e-09, Method: Composition-based stats.
Identities = 28/67 (41%), Positives = 42/67 (62%), Gaps = 2/67 (2%)
Query: 51 GSFALSEPGSGSDAFAMKTTATKDGNHYILNGSKMWISNADIANIFLVMANVDVSKGKVT 110
G+ A+SEP +GSD +MK A + Y+LNG+KMW +N +AN +V A D + G +
Sbjct: 152 GALAMSEPNAGSDVVSMKCRADRVDGGYVLNGNKMWCTNGPVANTLIVYAKTDTTAG--S 209
Query: 111 KGLFSSI 117
KG+ + I
Sbjct: 210 KGITAFI 216
>sp|Q54R47|GCDH_DICDI Glutaryl-CoA dehydrogenase, mitochondrial OS=Dictyostelium
discoideum GN=gcdh PE=3 SV=1
Length = 420
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 51 GSFALSEPGSGSDAFAMKTTATKD-GNHYILNGSKMWISNADIANIFLVMANVD 103
G F L+EP +GSD M+T A K+ +Y+LNG+K WI+N+ IA++F+V A V+
Sbjct: 162 GCFGLTEPNAGSDPAGMQTRAVKNSAGNYVLNGTKTWITNSPIADVFVVWAKVE 215
>sp|P45857|ACDB_BACSU Acyl-CoA dehydrogenase OS=Bacillus subtilis (strain 168) GN=mmgC
PE=2 SV=3
Length = 379
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 41/58 (70%)
Query: 51 GSFALSEPGSGSDAFAMKTTATKDGNHYILNGSKMWISNADIANIFLVMANVDVSKGK 108
G+FAL+EP SGSDA +++TTA K Y+LNGSK++I+N A+I++ A +G+
Sbjct: 119 GAFALTEPHSGSDAGSLRTTAIKKNGKYLLNGSKIFITNGGAADIYITFALTAPDQGR 176
>sp|P48818|ACADV_BOVIN Very long-chain specific acyl-CoA dehydrogenase, mitochondrial
OS=Bos taurus GN=ACADVL PE=2 SV=3
Length = 655
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 52 SFALSEPGSGSDAFAMKTTATKD--GNHYILNGSKMWISNADIANIFLVMANVDVS 105
+F L+EP SGSDA +++++A G +Y LNGSK+WISN +A+IF V A V+
Sbjct: 213 AFCLTEPSSGSDAASIRSSAVPSPCGKYYTLNGSKIWISNGGLADIFTVFAKTPVT 268
>sp|P41367|ACADM_PIG Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Sus
scrofa GN=ACADM PE=1 SV=3
Length = 421
Score = 58.9 bits (141), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/52 (46%), Positives = 36/52 (69%)
Query: 52 SFALSEPGSGSDAFAMKTTATKDGNHYILNGSKMWISNADIANIFLVMANVD 103
++ ++EPG+GSD +KT A K G+ YI+NG KMWI+N AN + ++A D
Sbjct: 157 AYCVTEPGAGSDVAGIKTKAEKKGDEYIINGQKMWITNGGKANWYFLLARSD 208
>sp|A5A6I0|ACADM_PANTR Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Pan
troglodytes GN=ACADM PE=2 SV=1
Length = 421
Score = 58.9 bits (141), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/52 (46%), Positives = 36/52 (69%)
Query: 52 SFALSEPGSGSDAFAMKTTATKDGNHYILNGSKMWISNADIANIFLVMANVD 103
++ ++EPG+GSD +KT A K G+ YI+NG KMWI+N AN + ++A D
Sbjct: 157 AYCVTEPGAGSDVAGIKTKAEKKGDEYIINGQKMWITNGGKANWYFLLARSD 208
>sp|Q60HI0|ACADL_MACFA Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Macaca
fascicularis GN=ACADL PE=2 SV=1
Length = 430
Score = 58.5 bits (140), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/77 (37%), Positives = 49/77 (63%)
Query: 24 IAPYVQKMESEEKIDETVLKTLFESGAGSFALSEPGSGSDAFAMKTTATKDGNHYILNGS 83
+ Y+ SEE+I + + G+ A++E G+GSD +KT A KDG+ +ILNGS
Sbjct: 141 VMSYITNYGSEEQIKHFIPQMTAGKCIGAIAMTELGAGSDLQGIKTNAKKDGSDWILNGS 200
Query: 84 KMWISNADIANIFLVMA 100
K++ISN ++++ +V+A
Sbjct: 201 KVFISNGWLSDVVIVVA 217
>sp|P11310|ACADM_HUMAN Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Homo
sapiens GN=ACADM PE=1 SV=1
Length = 421
Score = 58.5 bits (140), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/52 (46%), Positives = 36/52 (69%)
Query: 52 SFALSEPGSGSDAFAMKTTATKDGNHYILNGSKMWISNADIANIFLVMANVD 103
++ ++EPG+GSD +KT A K G+ YI+NG KMWI+N AN + ++A D
Sbjct: 157 AYCVTEPGAGSDVAGIKTKAEKKGDEYIINGQKMWITNGGKANWYFLLARSD 208
>sp|Q0NXR6|ACAD8_BOVIN Isobutyryl-CoA dehydrogenase, mitochondrial OS=Bos taurus GN=ACAD8
PE=2 SV=1
Length = 416
Score = 58.5 bits (140), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/49 (53%), Positives = 37/49 (75%)
Query: 51 GSFALSEPGSGSDAFAMKTTATKDGNHYILNGSKMWISNADIANIFLVM 99
S+ L+EPGSGSDA ++ T+A + +HYILNGSK +IS A+I++VM
Sbjct: 157 ASYCLTEPGSGSDAASLMTSAVRQHDHYILNGSKAFISGGGEADIYVVM 205
>sp|Q06319|ACDS_MEGEL Acyl-CoA dehydrogenase, short-chain specific OS=Megasphaera
elsdenii PE=1 SV=1
Length = 383
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Query: 51 GSFALSEPGSGSDAFAMKTTATK-DGNHYILNGSKMWISNADIANIFLVMANVDVSKG 107
G+F L+EP +G+DA +T ATK D Y LNGSK++I+N A+I++V A D SKG
Sbjct: 124 GAFGLTEPNAGTDASGQQTIATKNDDGTYTLNGSKIFITNGGAADIYIVFAMTDKSKG 181
>sp|A8WP91|ACAD2_CAEBR Probable medium-chain specific acyl-CoA dehydrogenase 2,
mitochondrial OS=Caenorhabditis briggsae GN=CBG00953
PE=3 SV=2
Length = 408
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 33/52 (63%)
Query: 52 SFALSEPGSGSDAFAMKTTATKDGNHYILNGSKMWISNADIANIFLVMANVD 103
S+ ++EPG+GSD +KT K GN YI+NGSK WI+ A F V+A D
Sbjct: 142 SYCVTEPGAGSDVNGVKTKCEKKGNEYIINGSKAWITGGGHAKWFFVLARSD 193
>sp|Q8HXY8|ACADM_MACFA Medium-chain specific acyl-CoA dehydrogenase, mitochondrial
OS=Macaca fascicularis GN=ACADM PE=2 SV=1
Length = 421
Score = 56.6 bits (135), Expect = 5e-08, Method: Composition-based stats.
Identities = 23/52 (44%), Positives = 36/52 (69%)
Query: 52 SFALSEPGSGSDAFAMKTTATKDGNHYILNGSKMWISNADIANIFLVMANVD 103
++ ++EPG+GSD +KT A K G+ YI+NG KMWI+N A+ + ++A D
Sbjct: 157 AYCVTEPGAGSDVAGIKTKAEKKGDEYIINGQKMWITNGGKASWYFLLARSD 208
>sp|P45953|ACADV_RAT Very long-chain specific acyl-CoA dehydrogenase, mitochondrial
OS=Rattus norvegicus GN=Acadvl PE=1 SV=1
Length = 655
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 37/55 (67%), Gaps = 2/55 (3%)
Query: 52 SFALSEPGSGSDAFAMKTTATKD--GNHYILNGSKMWISNADIANIFLVMANVDV 104
+F L+EP SGSD +++++A G +Y LNGSK+WISN +A+IF V A +
Sbjct: 213 AFCLTEPSSGSDVASIRSSAVPSPCGKYYTLNGSKIWISNGGLADIFTVFAKTPI 267
>sp|P50544|ACADV_MOUSE Very long-chain specific acyl-CoA dehydrogenase, mitochondrial
OS=Mus musculus GN=Acadvl PE=1 SV=3
Length = 656
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 38/55 (69%), Gaps = 2/55 (3%)
Query: 52 SFALSEPGSGSDAFAMKTTA--TKDGNHYILNGSKMWISNADIANIFLVMANVDV 104
+F L+EP SGSD +++++A + G +Y LNGSK+WISN +A+IF V A +
Sbjct: 214 AFCLTEPSSGSDVASIRSSAIPSPCGKYYTLNGSKIWISNGGLADIFTVFAKTPI 268
>sp|O34421|ACDC_BACSU Probable acyl-CoA dehydrogenase YngJ OS=Bacillus subtilis (strain
168) GN=yngJ PE=3 SV=1
Length = 380
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 33/50 (66%)
Query: 51 GSFALSEPGSGSDAFAMKTTATKDGNHYILNGSKMWISNADIANIFLVMA 100
GSF L+EP +GSDA +T A +G+ Y++NG K WI+NA A +V A
Sbjct: 121 GSFGLTEPNAGSDAGGTQTKAISNGDEYVINGEKCWITNASYARTVIVTA 170
>sp|P45952|ACADM_MOUSE Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Mus
musculus GN=Acadm PE=1 SV=1
Length = 421
Score = 55.8 bits (133), Expect = 8e-08, Method: Composition-based stats.
Identities = 22/49 (44%), Positives = 35/49 (71%)
Query: 52 SFALSEPGSGSDAFAMKTTATKDGNHYILNGSKMWISNADIANIFLVMA 100
++ ++EP +GSD A+KT A K G+ Y++NG KMWI+N AN + ++A
Sbjct: 157 AYCVTEPSAGSDVAAIKTKAEKKGDEYVINGQKMWITNGGKANWYFLLA 205
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.130 0.358
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,634,978
Number of Sequences: 539616
Number of extensions: 1474449
Number of successful extensions: 3477
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 131
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 3320
Number of HSP's gapped (non-prelim): 160
length of query: 120
length of database: 191,569,459
effective HSP length: 87
effective length of query: 33
effective length of database: 144,622,867
effective search space: 4772554611
effective search space used: 4772554611
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)