RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy5147
         (158 letters)



>d2fn0a1 d.161.1.1 (A:2-434) Salicylate synthetase Irp9 {Yersinia
           enterocolitica [TaxId: 630]}
          Length = 433

 Score = 29.0 bits (64), Expect = 0.22
 Identities = 11/42 (26%), Positives = 21/42 (50%), Gaps = 1/42 (2%)

Query: 18  FDRDVYTSGIGPVPALQCGVAVDLRPVKIRQRRAMLRA-AGV 58
             R++Y+  I  +   +   A+ LR V    +R  ++A AG+
Sbjct: 366 TPRELYSGAILLLDDTRFDAALVLRSVFQDSQRCWIQAGAGI 407


>d3bzna1 d.161.1.1 (A:2-429) Menaquinone-specific isochorismate
           synthase MenF {Escherichia coli [TaxId: 562]}
          Length = 428

 Score = 27.4 bits (60), Expect = 0.88
 Identities = 14/42 (33%), Positives = 17/42 (40%), Gaps = 1/42 (2%)

Query: 18  FDRDVYTSGIGPVPALQCGVAVDLRPVKIRQRRAMLRA-AGV 58
           F R+ Y    G +   Q    V LR  KI      L A AG+
Sbjct: 362 FTREWYAGSAGYLSLQQSEFCVSLRSAKISGNVVRLYAGAGI 403


>d2cuja1 a.4.1.18 (A:8-108) Transcriptional adaptor 2-like, TADA2L
          {Mouse (Mus musculus) [TaxId: 10090]}
          Length = 101

 Score = 24.8 bits (54), Expect = 3.1
 Identities = 6/21 (28%), Positives = 12/21 (57%)

Query: 55 AAGVDKIDPTEKNQCKQIRIS 75
            G +K++  EK  C+ +R+ 
Sbjct: 28 LPGTEKLNEKEKELCQVVRLV 48


>d1ml9a_ b.85.7.1 (A:) Dim-5 {Fungus (Neurospora crassa) [TaxId:
           5141]}
          Length = 284

 Score = 25.3 bits (54), Expect = 3.4
 Identities = 9/55 (16%), Positives = 14/55 (25%)

Query: 79  CGCACEGYCDPEICACALAGIKCQVDRQNFPCGCSRDCCANPKGRIEFNPVRVHS 133
           C CA +  C    C C         +  +      R    +   +      RV  
Sbjct: 42  CSCASDEECMYSTCQCLDEMAPDSDEEADPYTRKKRFAYYSQGAKKGLLRDRVLQ 96


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.325    0.138    0.452 

Gapped
Lambda     K      H
   0.267   0.0589    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 648,054
Number of extensions: 31656
Number of successful extensions: 175
Number of sequences better than 10.0: 1
Number of HSP's gapped: 172
Number of HSP's successfully gapped: 38
Length of query: 158
Length of database: 2,407,596
Length adjustment: 78
Effective length of query: 80
Effective length of database: 1,336,656
Effective search space: 106932480
Effective search space used: 106932480
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 49 (23.0 bits)