RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy5149
(250 letters)
>d1k8qa_ c.69.1.6 (A:) Gastric lipase {Dog (Canis familiaris)
[TaxId: 9615]}
Length = 377
Score = 140 bits (353), Expect = 3e-40
Identities = 61/156 (39%), Positives = 90/156 (57%), Gaps = 8/156 (5%)
Query: 50 TEIIRYWGYPAEEHKVTTKDGYILTNFRIPNP--------GGYPLLFLHGLTSSSDCFLG 101
+++I YWGYPAEE++V T+DGYIL RIP HGL +S+ ++
Sbjct: 17 SQMITYWGYPAEEYEVVTEDGYILGIDRIPYGRKNSENIGRRPVAFLQHGLLASATNWIS 76
Query: 102 RNPSVDIVFLLWKRGYDIWLWNARGNLYSREHVNLTTKQSKFYQFSYHEMGLYDTPALID 161
P+ + F+L GYD+WL N+RGN ++R ++ + +F+ FS+ EM YD PA ID
Sbjct: 77 NLPNNSLAFILADAGYDVWLGNSRGNTWARRNLYYSPDSVEFWAFSFDEMAKYDLPATID 136
Query: 162 YILAETGHKTLITLGHSLGSTNVLIATSLRPEYQAK 197
+IL +TG L +GHS G+T IA S P+ +
Sbjct: 137 FILKKTGQDKLHYVGHSQGTTIGFIAFSTNPKLAKR 172
>d1tcaa_ c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Candida
antarctica), form b [TaxId: 34362]}
Length = 317
Score = 52.8 bits (126), Expect = 8e-09
Identities = 17/119 (14%), Positives = 35/119 (29%), Gaps = 21/119 (17%)
Query: 79 PNPGGYPLLFLHGLTSSSDCFLGRNPSVDIVFLLWKRGYDIWLWNARGNLYSREHVNLTT 138
P+ P+L + G ++ N + L + GY +
Sbjct: 27 PSSVSKPILLVPGTGTTGPQSFDSN----WIPLSTQLGYTPCWISPPP------------ 70
Query: 139 KQSKFYQFSYHEMGLYDTPALIDYILAETGHKTLITLGHSLGSTNVLIATSLRPEYQAK 197
+ + ++ I + A +G+ L L S G + P ++K
Sbjct: 71 -----FMLNDTQVNTEYMVNAITALYAGSGNNKLPVLTWSQGGLVAQWGLTFFPSIRSK 124
>d1thta_ c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase {Vibrio
harveyi [TaxId: 669]}
Length = 302
Score = 48.8 bits (115), Expect = 2e-07
Identities = 22/166 (13%), Positives = 46/166 (27%), Gaps = 21/166 (12%)
Query: 62 EHKVTTKDGYILTNFRIPNPGGYP-----LLFLHGLTSSSDCFLGRNPSVDIVFLLWKRG 116
H + +G L + P P +L G D F G + L G
Sbjct: 6 AHVLRVNNGQELHVWETPPKENVPFKNNTILIASGFARRMDHFAG------LAEYLSTNG 59
Query: 117 YDIWLWNARGNLYSREHVNLTTKQSKFYQFSYHEMGLYDTPALIDYILAETGHKTLITLG 176
+ ++ +++ ++ +F+ + + L G + + +
Sbjct: 60 FHVFRYDSLHHVGLSSG--------SIDEFTMTTG-KNSLCT-VYHWLQTKGTQNIGLIA 109
Query: 177 HSLGSTNVLIATSLRPEYQAKRWIFDGNTQSVLEIGKNQDRSLRKV 222
SL + S + N + LE D +
Sbjct: 110 ASLSARVAYEVISDLELSFLITAVGVVNLRDTLEKALGFDYLSLPI 155
>d1cvla_ c.69.1.18 (A:) Lipase {Chromobacterium viscosum [TaxId:
42739]}
Length = 319
Score = 48.7 bits (115), Expect = 2e-07
Identities = 21/114 (18%), Positives = 36/114 (31%), Gaps = 16/114 (14%)
Query: 84 YPLLFLHGLTSSSDCFLGRNPSVDIVFLLWKRGYDIWLWNARGNLYSREHVNLTTKQSKF 143
YP++ +HGL + + I L G +++ N G
Sbjct: 9 YPVILVHGLAGTDKFANVVDYWYGIQSDLQSHGAKVYVANLSGFQSD------------- 55
Query: 144 YQFSYHEMGLYDTPALIDYILAETGHKTLITLGHSLGSTNVLIATSLRPEYQAK 197
A + +LA TG + +GHS G ++ P+ A
Sbjct: 56 ---DGPNGRGEQLLAYVKQVLAATGATKVNLIGHSQGGLTSRYVAAVAPQLVAS 106
>d1ex9a_ c.69.1.18 (A:) Lipase {Pseudomonas aeruginosa [TaxId: 287]}
Length = 285
Score = 47.1 bits (111), Expect = 6e-07
Identities = 19/114 (16%), Positives = 39/114 (34%), Gaps = 20/114 (17%)
Query: 84 YPLLFLHGLTSSSDCFLGRNPSVDIVFLLWKRGYDIWLWNARGNLYSREHVNLTTKQSKF 143
YP++ HG+ + G + I L + G +++
Sbjct: 8 YPIVLAHGMLGFDNIL-GVDYWFGIPSALRRDGAQVYVTEVSQ----------------- 49
Query: 144 YQFSYHEMGLYDTPALIDYILAETGHKTLITLGHSLGSTNVLIATSLRPEYQAK 197
E+ ++ I+A +G + +GHS G + ++RP+ A
Sbjct: 50 --LDTSEVRGEQLLQQVEEIVALSGQPKVNLIGHSHGGPTIRYVAAVRPDLIAS 101
>d1wm1a_ c.69.1.7 (A:) Proline aminopeptidase {Serratia marcescens
[TaxId: 615]}
Length = 313
Score = 44.1 bits (102), Expect = 7e-06
Identities = 19/93 (20%), Positives = 31/93 (33%), Gaps = 7/93 (7%)
Query: 59 PAEEHKVTTKDGYILTNFRIPNPGGYPLLFLHGLTSSSDCFLGRNPSVDIVFLLWKRGYD 118
+ + T DG+ + NP G P +F+HG R Y
Sbjct: 10 AYDSGWLDTGDGHRIYWELSGNPNGKPAVFIHGGPGGGISPHHRQL-------FDPERYK 62
Query: 119 IWLWNARGNLYSREHVNLTTKQSKFYQFSYHEM 151
+ L++ RG SR H +L + +
Sbjct: 63 VLLFDQRGCGRSRPHASLDNNTTWHLVADIERL 95
>d1azwa_ c.69.1.7 (A:) Proline iminopeptidase {Xanthomonas
campestris, pv. citri [TaxId: 339]}
Length = 313
Score = 41.3 bits (95), Expect = 5e-05
Identities = 17/110 (15%), Positives = 32/110 (29%), Gaps = 9/110 (8%)
Query: 59 PAEEHKVTTKDGYILTNFRIPNPGGYPLLFLHGLTSSSDCFLGRNPSVD-----IVFLLW 113
P ++ + D + L + NP G P++ LHG R ++F
Sbjct: 10 PYQQGSLKVDDRHTLYFEQCGNPHGKPVVMLHGGPGGGCNDKMRRFHDPAKYRIVLFDQR 69
Query: 114 KRGYDIWLWNARGNLYSREHVNLTTKQS----KFYQFSYHEMGLYDTPAL 159
G + N ++ ++ +Q G A
Sbjct: 70 GSGRSTPHADLVDNTTWDLVADIERLRTHLGVDRWQVFGGSWGSTLALAY 119
>d1bn7a_ c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus sp.
[TaxId: 1831]}
Length = 291
Score = 41.0 bits (94), Expect = 7e-05
Identities = 16/77 (20%), Positives = 27/77 (35%), Gaps = 8/77 (10%)
Query: 57 GYPAEEHKVTTKDGYILTNFRIPNPGGYPLLFLHGLTSSSDCFLGRNPSVDIVFLLWKRG 116
G+P + H V G + + G P+LFLHG +SS + +
Sbjct: 4 GFPFDPHYVEV-LGERMHYVDVGPRDGTPVLFLHGNPTSSYLW-------RNIIPHVAPS 55
Query: 117 YDIWLWNARGNLYSREH 133
+ + G S +
Sbjct: 56 HRCIAPDLIGMGKSDKP 72
>d1ufoa_ c.69.1.27 (A:) Hypothetical protein TT1662 {Thermus
thermophilus [TaxId: 274]}
Length = 238
Score = 40.5 bits (93), Expect = 7e-05
Identities = 20/119 (16%), Positives = 38/119 (31%), Gaps = 6/119 (5%)
Query: 77 RIPNPGGYPLLFLHGLTSSSDCFLGRNPSVDIVFLLWKRGYDIWLWNARGNLYSREHVNL 136
RIP LL LHGL S + L ++ +RG+ + ++A +
Sbjct: 18 RIPEAPKALLLALHGLQGSKEHIL------ALLPGYAERGFLLLAFDAPRHGEREGPPPS 71
Query: 137 TTKQSKFYQFSYHEMGLYDTPALIDYILAETGHKTLITLGHSLGSTNVLIATSLRPEYQ 195
+ + +G + + L G SLG+ + + +
Sbjct: 72 SKSPRYVEEVYRVALGFKEEARRVAEEAERRFGLPLFLAGGSLGAFVAHLLLAEGFRPR 130
>d1qlwa_ c.69.1.15 (A:) A novel bacterial esterase {Alcaligenes sp.
[TaxId: 512]}
Length = 318
Score = 40.2 bits (92), Expect = 1e-04
Identities = 16/128 (12%), Positives = 36/128 (28%), Gaps = 14/128 (10%)
Query: 76 FRIP-NPGGYPLLFLHGLTSSSDCFLGRNPSVDIVFLLW-KRGYDIWLWNARGNLYSREH 133
++IP YP+ +HG + + + ++GY ++ + G S
Sbjct: 50 YQIPQRAKRYPITLIHGCCLTGMTWETTPDGRMGWDEYFLRKGYSTYVIDQSGRGRSATD 109
Query: 134 VNLTTKQSKFYQFSYHEMGLYDTPALIDYILAETGHKTLITLGHSLGSTNVLIATSLRPE 193
+ ++G +L D G +
Sbjct: 110 ---------ISAINAVKLGKAPASSLPDL---FAAGHEAAWAIFRFGPRYPDAFKDTQFP 157
Query: 194 YQAKRWIF 201
QA+ ++
Sbjct: 158 VQAQAELW 165
>d1a8qa_ c.69.1.12 (A:) Bromoperoxidase A1 {Streptomyces
aureofaciens [TaxId: 1894]}
Length = 274
Score = 39.5 bits (90), Expect = 2e-04
Identities = 17/94 (18%), Positives = 34/94 (36%), Gaps = 8/94 (8%)
Query: 65 VTTKDGYILTNFRIPNPGGYPLLFLHGLTSSSDCFLGRNPSVDIVFLLWKRGYDIWLWNA 124
TT+DG + ++ G P++F+HG + D + D + + GY +
Sbjct: 3 CTTRDGVEI-FYKDWGQG-RPVVFIHGWPLNGDAWQ------DQLKAVVDAGYRGIAHDR 54
Query: 125 RGNLYSREHVNLTTKQSKFYQFSYHEMGLYDTPA 158
RG+ +S + + + L
Sbjct: 55 RGHGHSTPVWDGYDFDTFADDLNDLLTDLDLRDV 88
>d1a88a_ c.69.1.12 (A:) Chloroperoxidase L {Streptomyces lividans
[TaxId: 1916]}
Length = 275
Score = 39.2 bits (89), Expect = 3e-04
Identities = 17/87 (19%), Positives = 30/87 (34%), Gaps = 6/87 (6%)
Query: 65 VTTKDGYILTNFRIPNPGGYPLLFLHGLTSSSDCFLGRNPSVDIVFLLWKRGYDIWLWNA 124
VTT DG + G P++F HG S+D + + + GY + +
Sbjct: 3 VTTSDGTNIFYKDWGPRDGLPVVFHHGWPLSADDWD------NQMLFFLSHGYRVIAHDR 56
Query: 125 RGNLYSREHVNLTTKQSKFYQFSYHEM 151
RG+ S + + +
Sbjct: 57 RGHGRSDQPSTGHDMDTYAADVAALTE 83
>d1q0ra_ c.69.1.28 (A:) Aclacinomycin methylesterase RdmC
{Streptomyces purpurascens [TaxId: 1924]}
Length = 297
Score = 39.1 bits (89), Expect = 3e-04
Identities = 9/72 (12%), Positives = 17/72 (23%), Gaps = 5/72 (6%)
Query: 80 NPGGYPLLFLHGLTSSSDCFLGRNPSVDIVFLLWKRGYDIWLWNARGNLYSREHVNLTTK 139
+P LL + G S+ + L G + ++ R S
Sbjct: 19 DPADPALLLVMGGNLSALGWPDE-----FARRLADGGLHVIRYDHRDTGRSTTRDFAAHP 73
Query: 140 QSKFYQFSYHEM 151
+
Sbjct: 74 YGFGELAADAVA 85
>d1ispa_ c.69.1.18 (A:) Lipase A {Bacillus subtilis [TaxId: 1423]}
Length = 179
Score = 35.6 bits (81), Expect = 0.002
Identities = 20/103 (19%), Positives = 35/103 (33%), Gaps = 21/103 (20%)
Query: 83 GYPLLFLHGLTSSSDCFLGRNPSVDIVFLLWKRGYDIWLWNARGNLYSREHVNLTTKQSK 142
P++ +HG+ +S F G I L +G+ A
Sbjct: 2 HNPVVMVHGIGGASFNFAG------IKSYLVSQGWSRDKLYAVDF--------------- 40
Query: 143 FYQFSYHEMGLYDTPALIDYILAETGHKTLITLGHSLGSTNVL 185
+ + + + +L ETG K + + HS+G N L
Sbjct: 41 WDKTGTNYNNGPVLSRFVQKVLDETGAKKVDIVAHSMGGANTL 83
>d1brta_ c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces
aureofaciens [TaxId: 1894]}
Length = 277
Score = 35.3 bits (79), Expect = 0.005
Identities = 10/44 (22%), Positives = 17/44 (38%), Gaps = 6/44 (13%)
Query: 83 GYPLLFLHGLTSSSDCFLGRNPSVDIVFLLWKRGYDIWLWNARG 126
G P++ +HG S + L GY + ++ RG
Sbjct: 23 GQPVVLIHGFPLSGHSWE------RQSAALLDAGYRVITYDRRG 60
>d1imja_ c.69.1.23 (A:) Ccg1/TafII250-interacting factor B (Cib)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 208
Score = 34.7 bits (78), Expect = 0.007
Identities = 16/75 (21%), Positives = 29/75 (38%), Gaps = 13/75 (17%)
Query: 65 VTTKDGYILTN-----FRI----PNPGGYPLLFLHGLTSSSDCFLGRNPSVDIVFLLWKR 115
V ++G I FR + +L LHG+ SS+ + ++ + L +
Sbjct: 4 VEQREGTIQVQGQALFFREALPGSGQARFSVLLLHGIRFSSETWQ----NLGTLHRLAQA 59
Query: 116 GYDIWLWNARGNLYS 130
GY + G +S
Sbjct: 60 GYRAVAIDLPGLGHS 74
>d1r3da_ c.69.1.35 (A:) Hypothetical protein VC1974 {Vibrio cholerae
[TaxId: 666]}
Length = 264
Score = 34.1 bits (76), Expect = 0.011
Identities = 9/82 (10%), Positives = 23/82 (28%), Gaps = 6/82 (7%)
Query: 76 FRIPNPGGYPLLFLHGLTSSSDCFLGRNPSVDIVFLLWKRGYDIWLWNARGNLYSREHVN 135
F P ++ +HGL S + ++ L + + G+ + E
Sbjct: 9 FAKPTARTPLVVLVHGLLGSGADWQ------PVLSHLARTQCAALTLDLPGHGTNPERHC 62
Query: 136 LTTKQSKFYQFSYHEMGLYDTP 157
++ + +
Sbjct: 63 DNFAEAVEMIEQTVQAHVTSEV 84
>d1xkla_ c.69.1.20 (A:) Salicylic acid-binding protein 2 (SABP2)
{Common tobacco (Nicotiana tabacum) [TaxId: 4097]}
Length = 258
Score = 34.1 bits (76), Expect = 0.012
Identities = 6/44 (13%), Positives = 13/44 (29%), Gaps = 6/44 (13%)
Query: 83 GYPLLFLHGLTSSSDCFLGRNPSVDIVFLLWKRGYDIWLWNARG 126
G + +HG + + LL G+ + +
Sbjct: 2 GKHFVLVHGACHGGWSW------YKLKPLLEAAGHKVTALDLAA 39
>d1tqha_ c.69.1.29 (A:) Carboxylesterase Est {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 242
Score = 33.3 bits (74), Expect = 0.016
Identities = 12/51 (23%), Positives = 17/51 (33%), Gaps = 7/51 (13%)
Query: 76 FRIPNPGGYPLLFLHGLTSSSDCFLGRNPSVDIVFLLWKRGYDIWLWNARG 126
F G +L LHG T +S + L +GY +G
Sbjct: 5 FFFEA-GERAVLLLHGFTGNSADVR------MLGRFLESKGYTCHAPIYKG 48
>d1m33a_ c.69.1.26 (A:) Biotin biosynthesis protein BioH
{Escherichia coli [TaxId: 562]}
Length = 256
Score = 33.3 bits (74), Expect = 0.021
Identities = 10/76 (13%), Positives = 22/76 (28%), Gaps = 7/76 (9%)
Query: 76 FRIPNPGGYPLLFLHGLTSSSDCFLGRNPSVDIVFLLWKRGYDIWLWNARGNLYSREHVN 135
++ G L+ LHG +++ + + + + L + G SR
Sbjct: 4 WQTKGQGNVHLVLLHGWGLNAEVW-------RCIDEELSSHFTLHLVDLPGFGRSRGFGA 56
Query: 136 LTTKQSKFYQFSYHEM 151
L+
Sbjct: 57 LSLADMAEAVLQQAPD 72
>d2r8ba1 c.69.1.14 (A:44-246) Uncharacterized protein Atu2452
{Agrobacterium tumefaciens [TaxId: 358]}
Length = 203
Score = 32.8 bits (73), Expect = 0.025
Identities = 22/135 (16%), Positives = 35/135 (25%), Gaps = 9/135 (6%)
Query: 67 TKDGYILTNFRIPNPGGYPLLFLHGLTSSSDCFLGRNPSVDIVFLLWKRGYDIWLWNARG 126
TKD Y R G + LHG + F LL + + +
Sbjct: 2 TKDSYFHK-SRAGVAGAPLFVLLHGTGGDENQFFDFGA-----RLLPQATILSPVGDVSE 55
Query: 127 NLYSREHVNLTTKQSKFYQFSYHEMGLYDTPALIDYILAETGHKTLITLGHSLGSTNVLI 186
+ +R + D I +I LG S G+ +
Sbjct: 56 HGAARFFRRTGEGVYDMVDLERATGKMAD---FIKANREHYQAGPVIGLGFSNGANILAN 112
Query: 187 ATSLRPEYQAKRWIF 201
+PE +
Sbjct: 113 VLIEQPELFDAAVLM 127
>d1zd3a2 c.69.1.11 (A:225-547) Mammalian epoxide hydrolase,
C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 322
Score = 32.5 bits (72), Expect = 0.040
Identities = 9/69 (13%), Positives = 18/69 (26%), Gaps = 6/69 (8%)
Query: 83 GYPLLFLHGLTSSSDCFLGRNPSVDIVFLLWKRGYDIWLWNARGNLYSREHVNLTTKQSK 142
G + HG S + + L + GY + + +G S + +
Sbjct: 32 GPAVCLCHGFPESWYSWR------YQIPALAQAGYRVLAMDMKGYGESSAPPEIEEYCME 85
Query: 143 FYQFSYHEM 151
Sbjct: 86 VLCKEMVTF 94
>d1dqza_ c.69.1.3 (A:) Antigen 85c {Mycobacterium tuberculosis
[TaxId: 1773]}
Length = 280
Score = 32.2 bits (72), Expect = 0.042
Identities = 16/114 (14%), Positives = 39/114 (34%), Gaps = 3/114 (2%)
Query: 81 PGGYPLL-FLHGLTSSSDCFLGRNPSVDIVFLLWKRGYDIWLWNARGNLYSREHVNLTTK 139
GG + L GL + D + G + + ++ G + + + + + +
Sbjct: 26 GGGPHAVYLLDGLRAQDD-YNGWDINTPAFEEYYQSGLSVIMPVGGQSSFYTDWYQPSQS 84
Query: 140 QSKFYQFSYHEMGLYDTPALIDYILAETGHKTLITLGHSLGSTNVLIATSLRPE 193
+ Y + + + PA + + G S+ + LI + P+
Sbjct: 85 NGQNYTYKWETFLTREMPAWLQANKGVSPTGNAAV-GLSMSGGSALILAAYYPQ 137
>d1mtza_ c.69.1.7 (A:) Tricorn interacting factor F1 {Archaeon
Thermoplasma acidophilum [TaxId: 2303]}
Length = 290
Score = 32.2 bits (71), Expect = 0.050
Identities = 10/52 (19%), Positives = 18/52 (34%), Gaps = 6/52 (11%)
Query: 82 GGYPLLFLHGLTSSSDCFLGRNPSVDIVFLLWKRGYDIWLWNARGNLYSREH 133
L+ +HG S +L + + K G + ++ G S E
Sbjct: 24 EKAKLMTMHGGPGMSHDYL------LSLRDMTKEGITVLFYDQFGCGRSEEP 69
>d1ehya_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Agrobacterium
radiobacter [TaxId: 358]}
Length = 293
Score = 31.8 bits (70), Expect = 0.058
Identities = 12/70 (17%), Positives = 21/70 (30%), Gaps = 7/70 (10%)
Query: 83 GYPLLFLHGLTSSSDCFLGRNPSVDIVFLLWKRGYDIWLWNARGNLYSREHVNLTTKQSK 142
G LL LHG + V YD+ + + RG S + +
Sbjct: 28 GPTLLLLHGWPGFWWEWSK-------VIGPLAEHYDVIVPDLRGFGDSEKPDLNDLSKYS 80
Query: 143 FYQFSYHEMG 152
+ + +
Sbjct: 81 LDKAADDQAA 90
>d1hkha_ c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. [TaxId:
51671]}
Length = 279
Score = 31.4 bits (69), Expect = 0.082
Identities = 8/43 (18%), Positives = 16/43 (37%), Gaps = 6/43 (13%)
Query: 83 GYPLLFLHGLTSSSDCFLGRNPSVDIVFLLWKRGYDIWLWNAR 125
G P++ +HG + L +GY + ++ R
Sbjct: 23 GQPVVLIHGYPLDGHSWE------RQTRELLAQGYRVITYDRR 59
>d2rhwa1 c.69.1.10 (A:4-286)
2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase
(BPHD) {Burkholderia xenovorans [TaxId: 36873]}
Length = 283
Score = 31.3 bits (69), Expect = 0.088
Identities = 12/69 (17%), Positives = 22/69 (31%), Gaps = 3/69 (4%)
Query: 83 GYPLLFLHGLTSSSDCFLGRNPSVDIVFLLWKRGYDIWLWNARGNLYSREHVNLTTKQSK 142
G ++ LHG + + + V GY + L ++ G S V +
Sbjct: 30 GETVIMLHGGGPGAGGW---SNYYRNVGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLV 86
Query: 143 FYQFSYHEM 151
+ M
Sbjct: 87 NARAVKGLM 95
>d1uk8a_ c.69.1.10 (A:) Meta-cleavage product hydrolase CumD
{Pseudomonas fluorescens [TaxId: 294]}
Length = 271
Score = 30.9 bits (68), Expect = 0.13
Identities = 6/45 (13%), Positives = 15/45 (33%), Gaps = 4/45 (8%)
Query: 83 GYPLLFLHGLTSSSDCFLGRNPSVDIVFLLWKRGYDIWLWNARGN 127
G P++ +HG + ++ + Y + + G
Sbjct: 23 GQPVILIHGSGPGVSAYANWRLTIP----ALSKFYRVIAPDMVGF 63
>d1a8sa_ c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas fluorescens
[TaxId: 294]}
Length = 273
Score = 30.7 bits (67), Expect = 0.13
Identities = 13/58 (22%), Positives = 25/58 (43%), Gaps = 8/58 (13%)
Query: 66 TTKDGYILTNFRIPNPGGYPLLFLHGLTSSSDCFLGRNPSVDIVFLLWKRGYDIWLWN 123
TT+DG + + G P++F HG ++D + + L +GY + +
Sbjct: 4 TTRDGTQIYYKDWGS--GQPIVFSHGWPLNADSWE------SQMIFLAAQGYRVIAHD 53
>d1mj5a_ c.69.1.8 (A:) Haloalkane dehalogenase {Sphingomonas
paucimobilis, UT26, LinB [TaxId: 13689]}
Length = 298
Score = 30.6 bits (67), Expect = 0.15
Identities = 13/69 (18%), Positives = 21/69 (30%), Gaps = 9/69 (13%)
Query: 58 YPAEEHKVTTKDGYILTNFRIPNPGGYPLLFLHGLTSSSDCFLGRNPSVDIVFLLWKRGY 117
P E K G + + G P+LF HG +SS + +
Sbjct: 5 KPFGEKKFIEIKGRRM-AYIDEGTG-DPILFQHGNPTSSYLW-------RNIMPHCAGLG 55
Query: 118 DIWLWNARG 126
+ + G
Sbjct: 56 RLIACDLIG 64
>d1va4a_ c.69.1.12 (A:) Arylesterase {Pseudomonas fluorescens
[TaxId: 294]}
Length = 271
Score = 30.6 bits (67), Expect = 0.15
Identities = 12/43 (27%), Positives = 18/43 (41%), Gaps = 6/43 (13%)
Query: 83 GYPLLFLHGLTSSSDCFLGRNPSVDIVFLLWKRGYDIWLWNAR 125
G P+LF HG +D + + L RGY ++ R
Sbjct: 19 GKPVLFSHGWLLDADMWE------YQMEYLSSRGYRTIAFDRR 55
>d1c4xa_ c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate
hydrolase (BPHD) {Rhodococcus sp., strain rha1 [TaxId:
1831]}
Length = 281
Score = 30.7 bits (67), Expect = 0.16
Identities = 8/66 (12%), Positives = 22/66 (33%), Gaps = 7/66 (10%)
Query: 62 EHKVTTKDGYILTNFRIP-NPGGYPLLFLHGLTSSSDCFLGRNPSVDIVFLLWKRGYDIW 120
E + + G + ++ + +P ++ LHG + P + + +
Sbjct: 6 EKRFPS--GTLASHALVAGDPQSPAVVLLHGAGPGAHAASNWRPIIP----DLAENFFVV 59
Query: 121 LWNARG 126
+ G
Sbjct: 60 APDLIG 65
>d1b6ga_ c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacter
autotrophicus [TaxId: 280]}
Length = 310
Score = 29.9 bits (65), Expect = 0.28
Identities = 15/101 (14%), Positives = 32/101 (31%), Gaps = 14/101 (13%)
Query: 57 GYPAEEHKVTTKDGYILTNFRI------PNPGGYPLLFLHGLTSSSDCFLGRNPSVDIVF 110
YP + + GY R + L LHG + S + ++
Sbjct: 17 QYPFSPNYLDDLPGY--PGLRAHYLDEGNSDAEDVFLCLHGEPTWSYLYR------KMIP 68
Query: 111 LLWKRGYDIWLWNARGNLYSREHVNLTTKQSKFYQFSYHEM 151
+ + G + + G S + V+ +F++ +
Sbjct: 69 VFAESGARVIAPDFFGFGKSDKPVDEEDYTFEFHRNFLLAL 109
>d2h1ia1 c.69.1.14 (A:1-202) Carboxylesterase {Bacillus cereus
[TaxId: 1396]}
Length = 202
Score = 28.9 bits (63), Expect = 0.45
Identities = 16/110 (14%), Positives = 32/110 (29%), Gaps = 8/110 (7%)
Query: 76 FRIPNPGGYPLL-FLHGLTSSSDCFLGRNPSVDIVFLLWK-------RGYDIWLWNARGN 127
F+ P+L LHG + L VD + G +
Sbjct: 6 FQKGKDTSKPVLLLLHGTGGNELDLLPLAEIVDSEASVLSVRGNVLENGMPRFFRRLAEG 65
Query: 128 LYSREHVNLTTKQSKFYQFSYHEMGLYDTPALIDYILAETGHKTLITLGH 177
++ E + TK+ + + +D ++ + + L H
Sbjct: 66 IFDEEDLIFRTKELNEFLDEAAKEYKFDRNNIVAIGYSNGANIAASLLFH 115
>d1pjaa_ c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 268
Score = 28.5 bits (62), Expect = 0.63
Identities = 9/53 (16%), Positives = 20/53 (37%), Gaps = 8/53 (15%)
Query: 85 PLLFLHGLTSSSDCFLGRNPSVDIVFLLWKR--GYDIWLWNARGNLYSREHVN 135
P++ +HGL SS F ++ + + G + + + S +
Sbjct: 4 PVIVVHGLFDSSYSFR------HLLEYINETHPGTVVTVLDLFDGRESLRPLW 50
>d2v3ga1 c.1.8.3 (A:8-280) Endoglucanase H N-terminal domain
{Clostridium thermocellum [TaxId: 1515]}
Length = 273
Score = 28.4 bits (63), Expect = 0.76
Identities = 14/85 (16%), Positives = 27/85 (31%), Gaps = 12/85 (14%)
Query: 99 FLGRNPSVDIVFLLWKRGYDIWLWNARGNLYSREHVNLTTKQSKFYQFSYHEMGLYDTPA 158
GR + F+ W + W+ +Y+ + + T + Y + G D
Sbjct: 23 LQGRKLDIVHQFINWSTDFS-WVRPYADAVYNNGSILMITWEPWEYNTVDIKNGKAD--- 78
Query: 159 LIDYI------LAETGHKTLITLGH 177
YI + G + + H
Sbjct: 79 --AYITRMAQDMKAYGKEIWLRPLH 101
>d1a59a_ a.103.1.1 (A:) Citrate synthase {Antarctic bacterium
DS2-3R [TaxId: 56673]}
Length = 377
Score = 28.3 bits (62), Expect = 0.90
Identities = 9/47 (19%), Positives = 20/47 (42%), Gaps = 10/47 (21%)
Query: 16 KTQVRKVISGVVGAASSVTSIQVANLLRLFKIPQTEIIRYWGYPAEE 62
+ + K ++GV ++++ + T + Y GYP +E
Sbjct: 1 EPTIHKGLAGVTADVTAISKV----------NSDTNSLLYRGYPVQE 37
>d3c70a1 c.69.1.20 (A:2-257) Hydroxynitrile lyase {Rubber tree
(Hevea brasiliensis) [TaxId: 3981]}
Length = 256
Score = 27.9 bits (60), Expect = 1.0
Identities = 4/40 (10%), Positives = 13/40 (32%), Gaps = 6/40 (15%)
Query: 87 LFLHGLTSSSDCFLGRNPSVDIVFLLWKRGYDIWLWNARG 126
+ +H + + + + LL G+ + +
Sbjct: 6 VLIHTICHGAWIWH------KLKPLLEALGHKVTALDLAA 39
>d1j1ia_ c.69.1.10 (A:) Meta cleavage compound hydrolase CarC
{Janthinobacterium sp. J3 [TaxId: 213804]}
Length = 268
Score = 27.9 bits (60), Expect = 1.3
Identities = 9/72 (12%), Positives = 23/72 (31%), Gaps = 4/72 (5%)
Query: 83 GYPLLFLHGLTSSSDCFLGRNPSVDIVFLLWKRGYDIWLWNARGNLYSREHVNLTTKQSK 142
G P++ +HG + ++ V + R Y + + G + + T+ +
Sbjct: 22 GQPVILIHGGGAGAESEGNWRN----VIPILARHYRVIAMDMLGFGKTAKPDIEYTQDRR 77
Query: 143 FYQFSYHEMGLY 154
+
Sbjct: 78 IRHLHDFIKAMN 89
>d1xkta_ c.69.1.22 (A:) Fatty acid synthase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 286
Score = 27.4 bits (59), Expect = 1.5
Identities = 7/33 (21%), Positives = 11/33 (33%)
Query: 69 DGYILTNFRIPNPGGYPLLFLHGLTSSSDCFLG 101
+G L PL +H + S+ F
Sbjct: 11 EGPTLMRLNSVQSSERPLFLVHPIEGSTTVFHS 43
>d1r88a_ c.69.1.3 (A:) Antigen pt51/mpb51 {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 267
Score = 27.2 bits (59), Expect = 1.7
Identities = 13/120 (10%), Positives = 32/120 (26%), Gaps = 13/120 (10%)
Query: 77 RIPNPGGYPLLFLHGLTSSSDCFLGRNPSVDIVFLLWKRGYDIWLWNARGNLYSREHVNL 136
G + + L + D + + + L +G +
Sbjct: 21 AFLAGGPHAVYLLDAFNAGPD-VSNWVTAGNAMNTLAGKGISVVAPAGGAYSMYT----- 74
Query: 137 TTKQSKFYQFSYHEMGLYDTPALIDYILAETGHKT--LITLGHSLGSTNVLIATSLRPEY 194
+ Q + + + L D++ A G +G + G + + P+
Sbjct: 75 -----NWEQDGSKQWDTFLSAELPDWLAANRGLAPGGHAAVGAAQGGYGAMALAAFHPDR 129
>d3b5ea1 c.69.1.14 (A:7-215) Uncharacterized protein Mll8374
{Mesorhizobium loti [TaxId: 381]}
Length = 209
Score = 26.6 bits (57), Expect = 3.1
Identities = 16/134 (11%), Positives = 28/134 (20%), Gaps = 13/134 (9%)
Query: 76 FRIPNPG---GYPLLFLHGLTSSSDCFLGRNPSVDIVFLLWKRGYDIWLWNARGNLYSRE 132
+R+ G L LHG + + + +
Sbjct: 13 YRLLGAGKESRECLFLLHGSGVDETTLV------PLARRIAPTATLVAARGRIPQEDGFR 66
Query: 133 HVNLTTKQSKFYQFSYHEMGLYDTPALIDYILAETG--HKTLITLGHSLGSTNVLIATSL 190
+ E + A + G LG+S G+ V L
Sbjct: 67 WFERIDPTRFEQKSILAETAAFA--AFTNEAAKRHGLNLDHATFLGYSNGANLVSSLMLL 124
Query: 191 RPEYQAKRWIFDGN 204
P +
Sbjct: 125 HPGIVRLAALLRPM 138
>d1ioma_ a.103.1.1 (A:) Citrate synthase {Thermus thermophilus
[TaxId: 274]}
Length = 374
Score = 26.7 bits (58), Expect = 3.3
Identities = 10/44 (22%), Positives = 17/44 (38%), Gaps = 10/44 (22%)
Query: 19 VRKVISGVVGAASSVTSIQVANLLRLFKIPQTEIIRYWGYPAEE 62
V + + GV+ S + I Q + Y+G P +E
Sbjct: 1 VARGLEGVLFTESRMCYID----------GQQGKLYYYGIPIQE 34
>d1t8sa_ c.56.2.1 (A:) AMP nucleosidase {Escherichia coli [TaxId:
562]}
Length = 477
Score = 25.3 bits (55), Expect = 8.1
Identities = 7/59 (11%), Positives = 18/59 (30%), Gaps = 3/59 (5%)
Query: 157 PALIDYILAETGHKTLITLGHSLGSTNVLIATSLRPEYQAKRWIFDGNTQSV---LEIG 212
+ + L + + + +G +N + W+ G+ + IG
Sbjct: 251 HQMPAWHLITADGQGITLVNIGVGPSNAKTICDHLAVLRPDVWLMIGHCGGLRESQAIG 309
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.320 0.137 0.418
Gapped
Lambda K H
0.267 0.0621 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 921,238
Number of extensions: 40688
Number of successful extensions: 155
Number of sequences better than 10.0: 1
Number of HSP's gapped: 150
Number of HSP's successfully gapped: 52
Length of query: 250
Length of database: 2,407,596
Length adjustment: 83
Effective length of query: 167
Effective length of database: 1,268,006
Effective search space: 211757002
Effective search space used: 211757002
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.0 bits)