BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5152
(161 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q95220|MMP14_RABIT Matrix metalloproteinase-14 OS=Oryctolagus cuniculus GN=MMP14 PE=2
SV=2
Length = 582
Score = 127 bits (318), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 65/156 (41%), Positives = 100/156 (64%), Gaps = 4/156 (2%)
Query: 3 YWKLTDDGIAEGYPKLISKSWIGLPGQIDAAFTYSKNGKTYFFKGSKYWRYTGKSMDDGY 62
+W++ ++ + +GYP I + W GLP I+ A+ K+GK FFKG K+W + S++ GY
Sbjct: 341 FWRVRNNQVMDGYPMPIGQLWRGLPASINTAYE-RKDGKFVFFKGDKHWVFDEASLEPGY 399
Query: 63 PKDISEGFTGIP-DNIDAALVWSGNGKIYFFKGSKFWKFDPSSKPPVKSTYPKPTSNWEG 121
PK I E G+P D IDAAL W NGK YFF+G+K+++F+ + V S YPK WEG
Sbjct: 400 PKHIKELGRGLPTDKIDAALFWMPNGKTYFFRGNKYYRFNEELR-AVDSEYPKNIKVWEG 458
Query: 122 IPDNIDAALHYTNG-YTYFFKGSQYWRFNDKSFSVN 156
IP++ + ++ +TYF+KG++YW+FN++ V
Sbjct: 459 IPESPRGSFMGSDEVFTYFYKGNKYWKFNNQKLKVE 494
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/121 (40%), Positives = 70/121 (57%), Gaps = 7/121 (5%)
Query: 39 NGKTYFFKGSKYWRYTGKSMDDGYPKDISEGFTGIPDNIDAALVWSGNGKIYFFKGSKFW 98
G+ + FK +WR + DGYP I + + G+P +I+ A +GK FFKG K W
Sbjct: 330 RGEMFVFKERWFWRVRNNQVMDGYPMPIGQLWRGLPASINTAYE-RKDGKFVFFKGDKHW 388
Query: 99 KFDPSSKPPVKSTYPKPTSNW-EGIP-DNIDAALHYT-NGYTYFFKGSQYWRFNDKSFSV 155
FD +S P YPK G+P D IDAAL + NG TYFF+G++Y+RFN++ +V
Sbjct: 389 VFDEASLEP---GYPKHIKELGRGLPTDKIDAALFWMPNGKTYFFRGNKYYRFNEELRAV 445
Query: 156 N 156
+
Sbjct: 446 D 446
>sp|P50281|MMP14_HUMAN Matrix metalloproteinase-14 OS=Homo sapiens GN=MMP14 PE=1 SV=3
Length = 582
Score = 126 bits (316), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 65/156 (41%), Positives = 100/156 (64%), Gaps = 4/156 (2%)
Query: 3 YWKLTDDGIAEGYPKLISKSWIGLPGQIDAAFTYSKNGKTYFFKGSKYWRYTGKSMDDGY 62
+W++ ++ + +GYP I + W GLP I+ A+ K+GK FFKG K+W + S++ GY
Sbjct: 341 FWRVRNNQVMDGYPMPIGQFWRGLPASINTAYE-RKDGKFVFFKGDKHWVFDEASLEPGY 399
Query: 63 PKDISEGFTGIP-DNIDAALVWSGNGKIYFFKGSKFWKFDPSSKPPVKSTYPKPTSNWEG 121
PK I E G+P D IDAAL W NGK YFF+G+K+++F+ + V S YPK WEG
Sbjct: 400 PKHIKELGRGLPTDKIDAALFWMPNGKTYFFRGNKYYRFNEELR-AVDSEYPKNIKVWEG 458
Query: 122 IPDNIDAALHYTNG-YTYFFKGSQYWRFNDKSFSVN 156
IP++ + ++ +TYF+KG++YW+FN++ V
Sbjct: 459 IPESPRGSFMGSDEVFTYFYKGNKYWKFNNQKLKVE 494
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/121 (40%), Positives = 70/121 (57%), Gaps = 7/121 (5%)
Query: 39 NGKTYFFKGSKYWRYTGKSMDDGYPKDISEGFTGIPDNIDAALVWSGNGKIYFFKGSKFW 98
G+ + FK +WR + DGYP I + + G+P +I+ A +GK FFKG K W
Sbjct: 330 RGEMFVFKERWFWRVRNNQVMDGYPMPIGQFWRGLPASINTAYE-RKDGKFVFFKGDKHW 388
Query: 99 KFDPSSKPPVKSTYPKPTSNW-EGIP-DNIDAALHYT-NGYTYFFKGSQYWRFNDKSFSV 155
FD +S P YPK G+P D IDAAL + NG TYFF+G++Y+RFN++ +V
Sbjct: 389 VFDEASLEP---GYPKHIKELGRGLPTDKIDAALFWMPNGKTYFFRGNKYYRFNEELRAV 445
Query: 156 N 156
+
Sbjct: 446 D 446
>sp|Q9GLE4|MMP14_BOVIN Matrix metalloproteinase-14 OS=Bos taurus GN=MMP14 PE=2 SV=1
Length = 582
Score = 126 bits (316), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 65/156 (41%), Positives = 100/156 (64%), Gaps = 4/156 (2%)
Query: 3 YWKLTDDGIAEGYPKLISKSWIGLPGQIDAAFTYSKNGKTYFFKGSKYWRYTGKSMDDGY 62
+W++ + + +GYP I + W GLP I+ A+ K+GK FFKG K+W + S++ GY
Sbjct: 340 FWRVRKNQVMDGYPMPIGQFWRGLPASINTAYE-RKDGKFVFFKGDKHWVFDEASLEPGY 398
Query: 63 PKDISEGFTGIP-DNIDAALVWSGNGKIYFFKGSKFWKFDPSSKPPVKSTYPKPTSNWEG 121
PK I E G+P D IDAAL W NGK YFF+G+K+++F+ + V+S YPK WEG
Sbjct: 399 PKHIKELGRGLPTDRIDAALFWMPNGKTYFFRGNKYYRFNEELR-IVESEYPKNIKVWEG 457
Query: 122 IPDNIDAALHYTNG-YTYFFKGSQYWRFNDKSFSVN 156
IP++ + ++ +TYF+KG++YW+FN++ V
Sbjct: 458 IPESPRGSFMGSDEVFTYFYKGNKYWKFNNQKLKVE 493
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 67/116 (57%), Gaps = 7/116 (6%)
Query: 39 NGKTYFFKGSKYWRYTGKSMDDGYPKDISEGFTGIPDNIDAALVWSGNGKIYFFKGSKFW 98
G+ + FK +WR + DGYP I + + G+P +I+ A +GK FFKG K W
Sbjct: 329 RGEMFVFKERWFWRVRKNQVMDGYPMPIGQFWRGLPASINTAYE-RKDGKFVFFKGDKHW 387
Query: 99 KFDPSSKPPVKSTYPKPTSNW-EGIP-DNIDAALHYT-NGYTYFFKGSQYWRFNDK 151
FD +S P YPK G+P D IDAAL + NG TYFF+G++Y+RFN++
Sbjct: 388 VFDEASLEP---GYPKHIKELGRGLPTDRIDAALFWMPNGKTYFFRGNKYYRFNEE 440
>sp|P53690|MMP14_MOUSE Matrix metalloproteinase-14 OS=Mus musculus GN=Mmp14 PE=2 SV=3
Length = 582
Score = 125 bits (315), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 65/156 (41%), Positives = 100/156 (64%), Gaps = 4/156 (2%)
Query: 3 YWKLTDDGIAEGYPKLISKSWIGLPGQIDAAFTYSKNGKTYFFKGSKYWRYTGKSMDDGY 62
+W++ ++ + +GYP I + W GLP I+ A+ K+GK FFKG K+W + S++ GY
Sbjct: 341 FWRVRNNQVMDGYPMPIGQFWRGLPASINTAYE-RKDGKFVFFKGDKHWVFDEASLEPGY 399
Query: 63 PKDISEGFTGIP-DNIDAALVWSGNGKIYFFKGSKFWKFDPSSKPPVKSTYPKPTSNWEG 121
PK I E G+P D IDAAL W NGK YFF+G+K+++F+ + V S YPK WEG
Sbjct: 400 PKHIKELGRGLPTDKIDAALFWMPNGKTYFFRGNKYYRFNEEFR-AVDSEYPKNIKVWEG 458
Query: 122 IPDNIDAALHYTNG-YTYFFKGSQYWRFNDKSFSVN 156
IP++ + ++ +TYF+KG++YW+FN++ V
Sbjct: 459 IPESPRGSFMGSDEVFTYFYKGNKYWKFNNQKLKVE 494
Score = 76.6 bits (187), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/121 (40%), Positives = 70/121 (57%), Gaps = 7/121 (5%)
Query: 39 NGKTYFFKGSKYWRYTGKSMDDGYPKDISEGFTGIPDNIDAALVWSGNGKIYFFKGSKFW 98
G+ + FK +WR + DGYP I + + G+P +I+ A +GK FFKG K W
Sbjct: 330 RGEMFVFKERWFWRVRNNQVMDGYPMPIGQFWRGLPASINTAYE-RKDGKFVFFKGDKHW 388
Query: 99 KFDPSSKPPVKSTYPKPTSNW-EGIP-DNIDAALHYT-NGYTYFFKGSQYWRFNDKSFSV 155
FD +S P YPK G+P D IDAAL + NG TYFF+G++Y+RFN++ +V
Sbjct: 389 VFDEASLEP---GYPKHIKELGRGLPTDKIDAALFWMPNGKTYFFRGNKYYRFNEEFRAV 445
Query: 156 N 156
+
Sbjct: 446 D 446
>sp|Q10739|MMP14_RAT Matrix metalloproteinase-14 OS=Rattus norvegicus GN=Mmp14 PE=2 SV=2
Length = 582
Score = 125 bits (315), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 65/156 (41%), Positives = 100/156 (64%), Gaps = 4/156 (2%)
Query: 3 YWKLTDDGIAEGYPKLISKSWIGLPGQIDAAFTYSKNGKTYFFKGSKYWRYTGKSMDDGY 62
+W++ ++ + +GYP I + W GLP I+ A+ K+GK FFKG K+W + S++ GY
Sbjct: 341 FWRVRNNQVMDGYPMPIGQFWRGLPASINTAYE-RKDGKFVFFKGDKHWVFDEASLEPGY 399
Query: 63 PKDISEGFTGIP-DNIDAALVWSGNGKIYFFKGSKFWKFDPSSKPPVKSTYPKPTSNWEG 121
PK I E G+P D IDAAL W NGK YFF+G+K+++F+ + V S YPK WEG
Sbjct: 400 PKHIKELGRGLPTDKIDAALFWMPNGKTYFFRGNKYYRFNEEFR-AVDSEYPKNIKVWEG 458
Query: 122 IPDNIDAALHYTNG-YTYFFKGSQYWRFNDKSFSVN 156
IP++ + ++ +TYF+KG++YW+FN++ V
Sbjct: 459 IPESPRGSFMGSDEVFTYFYKGNKYWKFNNQKLKVE 494
Score = 76.3 bits (186), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/121 (40%), Positives = 70/121 (57%), Gaps = 7/121 (5%)
Query: 39 NGKTYFFKGSKYWRYTGKSMDDGYPKDISEGFTGIPDNIDAALVWSGNGKIYFFKGSKFW 98
G+ + FK +WR + DGYP I + + G+P +I+ A +GK FFKG K W
Sbjct: 330 RGEMFVFKERWFWRVRNNQVMDGYPMPIGQFWRGLPASINTAYE-RKDGKFVFFKGDKHW 388
Query: 99 KFDPSSKPPVKSTYPKPTSNW-EGIP-DNIDAALHYT-NGYTYFFKGSQYWRFNDKSFSV 155
FD +S P YPK G+P D IDAAL + NG TYFF+G++Y+RFN++ +V
Sbjct: 389 VFDEASLEP---GYPKHIKELGRGLPTDKIDAALFWMPNGKTYFFRGNKYYRFNEEFRAV 445
Query: 156 N 156
+
Sbjct: 446 D 446
>sp|Q5RES1|MMP14_PONAB Matrix metalloproteinase-14 OS=Pongo abelii GN=MMP14 PE=2 SV=1
Length = 582
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/156 (41%), Positives = 100/156 (64%), Gaps = 4/156 (2%)
Query: 3 YWKLTDDGIAEGYPKLISKSWIGLPGQIDAAFTYSKNGKTYFFKGSKYWRYTGKSMDDGY 62
+W++ ++ + +GYP I + W GLP I+ A+ K+GK FFKG K+W + S++ GY
Sbjct: 341 FWRVRNNQVMDGYPMPIGQFWRGLPASINTAYE-RKDGKFVFFKGDKHWVFDEASLEPGY 399
Query: 63 PKDISEGFTGIP-DNIDAALVWSGNGKIYFFKGSKFWKFDPSSKPPVKSTYPKPTSNWEG 121
PK I E G+P D IDAAL W NGK YFF+G+K+++F+ + V S YPK WEG
Sbjct: 400 PKHIKELGRGLPTDKIDAALFWMPNGKTYFFRGNKYYRFNEELR-AVDSEYPKNIKVWEG 458
Query: 122 IPDNIDAALHYTNG-YTYFFKGSQYWRFNDKSFSVN 156
IP++ + ++ +TYF+KG++YW+F+++ V
Sbjct: 459 IPESPRGSFMGSDEVFTYFYKGNKYWKFDNQKLKVE 494
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/121 (40%), Positives = 70/121 (57%), Gaps = 7/121 (5%)
Query: 39 NGKTYFFKGSKYWRYTGKSMDDGYPKDISEGFTGIPDNIDAALVWSGNGKIYFFKGSKFW 98
G+ + FK +WR + DGYP I + + G+P +I+ A +GK FFKG K W
Sbjct: 330 RGEMFVFKERWFWRVRNNQVMDGYPMPIGQFWRGLPASINTAYE-RKDGKFVFFKGDKHW 388
Query: 99 KFDPSSKPPVKSTYPKPTSNW-EGIP-DNIDAALHYT-NGYTYFFKGSQYWRFNDKSFSV 155
FD +S P YPK G+P D IDAAL + NG TYFF+G++Y+RFN++ +V
Sbjct: 389 VFDEASLEP---GYPKHIKELGRGLPTDKIDAALFWMPNGKTYFFRGNKYYRFNEELRAV 445
Query: 156 N 156
+
Sbjct: 446 D 446
>sp|P51512|MMP16_HUMAN Matrix metalloproteinase-16 OS=Homo sapiens GN=MMP16 PE=1 SV=2
Length = 607
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/156 (40%), Positives = 98/156 (62%), Gaps = 4/156 (2%)
Query: 3 YWKLTDDGIAEGYPKLISKSWIGLPGQIDAAFTYSKNGKTYFFKGSKYWRYTGKSMDDGY 62
+W++ ++ + +GYP I+ W GLP IDA + S +G FFKG+KYW + ++ GY
Sbjct: 365 FWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENS-DGNFVFFKGNKYWVFKDTTLQPGY 423
Query: 63 PKDISEGFTGIPDN-IDAALVWSGNGKIYFFKGSKFWKFDPSSKPPVKSTYPKPTSNWEG 121
P D+ +GIP + ID+A+ W GK YFFKG ++W++ K + YPKP + W+G
Sbjct: 424 PHDLITLGSGIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKT-MDPGYPKPITVWKG 482
Query: 122 IPDNIDAA-LHYTNGYTYFFKGSQYWRFNDKSFSVN 156
IP++ A +H NG+TYF+KG +YW+FN++ V
Sbjct: 483 IPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKVE 518
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 18/97 (18%)
Query: 2 HYWKLTDD--GIAEGYPKLISKSWIGLPGQIDAAFTYSKNGKTYFFKGSKYWRYTGKSM- 58
YW+ +++ + GYPK I+ W G+P AF + +NG TYF+KG +YW++ + +
Sbjct: 458 RYWRYSEEMKTMDPGYPKPIT-VWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILK 516
Query: 59 -DDGYPKDISEGFTGI-------------PDNIDAAL 81
+ GYP+ I + F G PD++D +
Sbjct: 517 VEPGYPRSILKDFMGCDGPTDRVKEGHSPPDDVDIVI 553
>sp|Q9WTR0|MMP16_MOUSE Matrix metalloproteinase-16 OS=Mus musculus GN=Mmp16 PE=2 SV=3
Length = 607
Score = 123 bits (309), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 63/156 (40%), Positives = 97/156 (62%), Gaps = 4/156 (2%)
Query: 3 YWKLTDDGIAEGYPKLISKSWIGLPGQIDAAFTYSKNGKTYFFKGSKYWRYTGKSMDDGY 62
+W++ ++ + +GYP I+ W GLP IDA + S +G FFKG+KYW + ++ GY
Sbjct: 365 FWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENS-DGNFVFFKGNKYWVFKDTTLQPGY 423
Query: 63 PKDISEGFTGIPDN-IDAALVWSGNGKIYFFKGSKFWKFDPSSKPPVKSTYPKPTSNWEG 121
P D+ GIP + ID+A+ W GK YFFKG ++W++ K + YPKP + W+G
Sbjct: 424 PHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKT-MDPGYPKPITIWKG 482
Query: 122 IPDNIDAA-LHYTNGYTYFFKGSQYWRFNDKSFSVN 156
IP++ A +H NG+TYF+KG +YW+FN++ V
Sbjct: 483 IPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKVE 518
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 80/149 (53%), Gaps = 19/149 (12%)
Query: 3 YWKLTDDGIAEGYPKLISKSWIGLPGQ-IDAAFTYSKNGKTYFFKGSKYWRYTG--KSMD 59
YW D + GYP + G+P ID+A + GKTYFFKG +YWRY+ K+MD
Sbjct: 411 YWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMD 470
Query: 60 DGYPKDISEGFTGIPDNIDAALVWSGNGKIYFFKGSKFWKFDPSSKPPVKSTYPK----- 114
GYPK I+ + GIP++ A V NG YF+KG ++WKF+ + V+ YP+
Sbjct: 471 PGYPKPITI-WKGIPESPQGAFVHKENGFTYFYKGKEYWKFN-NQILKVEPGYPRSILKD 528
Query: 115 ------PT-SNWEGI--PDNIDAALHYTN 134
PT + EG+ PD++D + N
Sbjct: 529 FMGCDGPTDRDKEGLSPPDDVDIVIKLDN 557
>sp|O35548|MMP16_RAT Matrix metalloproteinase-16 OS=Rattus norvegicus GN=Mmp16 PE=2 SV=1
Length = 607
Score = 123 bits (309), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 63/156 (40%), Positives = 97/156 (62%), Gaps = 4/156 (2%)
Query: 3 YWKLTDDGIAEGYPKLISKSWIGLPGQIDAAFTYSKNGKTYFFKGSKYWRYTGKSMDDGY 62
+W++ ++ + +GYP I+ W GLP IDA + S +G FFKG+KYW + ++ GY
Sbjct: 365 FWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENS-DGNFVFFKGNKYWVFKDTTLQPGY 423
Query: 63 PKDISEGFTGIPDN-IDAALVWSGNGKIYFFKGSKFWKFDPSSKPPVKSTYPKPTSNWEG 121
P D+ GIP + ID+A+ W GK YFFKG ++W++ K + YPKP + W+G
Sbjct: 424 PHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKT-MDPGYPKPITIWKG 482
Query: 122 IPDNIDAA-LHYTNGYTYFFKGSQYWRFNDKSFSVN 156
IP++ A +H NG+TYF+KG +YW+FN++ V
Sbjct: 483 IPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKVE 518
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 80/149 (53%), Gaps = 19/149 (12%)
Query: 3 YWKLTDDGIAEGYPKLISKSWIGLPGQ-IDAAFTYSKNGKTYFFKGSKYWRYTG--KSMD 59
YW D + GYP + G+P ID+A + GKTYFFKG +YWRY+ K+MD
Sbjct: 411 YWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMD 470
Query: 60 DGYPKDISEGFTGIPDNIDAALVWSGNGKIYFFKGSKFWKFDPSSKPPVKSTYPK----- 114
GYPK I+ + GIP++ A V NG YF+KG ++WKF+ + V+ YP+
Sbjct: 471 PGYPKPITI-WKGIPESPQGAFVHKENGFTYFYKGKEYWKFN-NQILKVEPGYPRSILKD 528
Query: 115 ------PT-SNWEGI--PDNIDAALHYTN 134
PT + EG+ PD++D + N
Sbjct: 529 FMGCDGPTDRDKEGLSPPDDVDIVIKLDN 557
>sp|Q9R0S2|MMP24_MOUSE Matrix metalloproteinase-24 OS=Mus musculus GN=Mmp24 PE=1 SV=2
Length = 618
Score = 123 bits (308), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 93/156 (59%), Gaps = 4/156 (2%)
Query: 3 YWKLTDDGIAEGYPKLISKSWIGLPGQIDAAFTYSKNGKTYFFKGSKYWRYTGKSMDDGY 62
+W+L ++ + EGYP I + W GLP +IDAA+ + +G+ FFKG KYW + +++ GY
Sbjct: 375 FWRLRNNRVQEGYPMQIEQFWKGLPARIDAAYERA-DGRFVFFKGDKYWVFKEVTVEPGY 433
Query: 63 PKDISEGFTGIP-DNIDAALVWSGNGKIYFFKGSKFWKFDPSSKPPVKSTYPKPTSNWEG 121
P + E + +P + ID AL W GK YFFKG ++W++ + YPKP + W+G
Sbjct: 434 PHSLGELGSCLPREGIDTALRWEPVGKTYFFKGERYWRYSEERR-ATDPGYPKPITVWKG 492
Query: 122 IPDNIDAALHYTNG-YTYFFKGSQYWRFNDKSFSVN 156
IP A G YTYF+KG YW+F+++ SV
Sbjct: 493 IPQAPQGAFISKEGYYTYFYKGRDYWKFDNQKLSVE 528
>sp|Q99PW6|MMP24_RAT Matrix metalloproteinase-24 OS=Rattus norvegicus GN=Mmp24 PE=2 SV=1
Length = 618
Score = 123 bits (308), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 93/156 (59%), Gaps = 4/156 (2%)
Query: 3 YWKLTDDGIAEGYPKLISKSWIGLPGQIDAAFTYSKNGKTYFFKGSKYWRYTGKSMDDGY 62
+W+L ++ + EGYP I + W GLP +IDAA+ + +G+ FFKG KYW + +++ GY
Sbjct: 375 FWRLRNNRVQEGYPMQIEQFWKGLPARIDAAYERA-DGRFVFFKGDKYWVFKEVTVEPGY 433
Query: 63 PKDISEGFTGIP-DNIDAALVWSGNGKIYFFKGSKFWKFDPSSKPPVKSTYPKPTSNWEG 121
P + E + +P + ID AL W GK YFFKG ++W++ + YPKP + W+G
Sbjct: 434 PHSLGELGSCLPREGIDTALRWEPVGKTYFFKGERYWRYSEERR-ATDPGYPKPITVWKG 492
Query: 122 IPDNIDAALHYTNG-YTYFFKGSQYWRFNDKSFSVN 156
IP A G YTYF+KG YW+F+++ SV
Sbjct: 493 IPQAPQGAFISKEGYYTYFYKGRDYWKFDNQKLSVE 528
>sp|Q9Y5R2|MMP24_HUMAN Matrix metalloproteinase-24 OS=Homo sapiens GN=MMP24 PE=2 SV=1
Length = 645
Score = 123 bits (308), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 93/156 (59%), Gaps = 4/156 (2%)
Query: 3 YWKLTDDGIAEGYPKLISKSWIGLPGQIDAAFTYSKNGKTYFFKGSKYWRYTGKSMDDGY 62
+W+L ++ + EGYP I + W GLP +IDAA+ + +G+ FFKG KYW + +++ GY
Sbjct: 402 FWRLRNNRVQEGYPMQIEQFWKGLPARIDAAYERA-DGRFVFFKGDKYWVFKEVTVEPGY 460
Query: 63 PKDISEGFTGIP-DNIDAALVWSGNGKIYFFKGSKFWKFDPSSKPPVKSTYPKPTSNWEG 121
P + E + +P + ID AL W GK YFFKG ++W++ + YPKP + W+G
Sbjct: 461 PHSLGELGSCLPREGIDTALRWEPVGKTYFFKGERYWRYSEERR-ATDPGYPKPITVWKG 519
Query: 122 IPDNIDAALHYTNG-YTYFFKGSQYWRFNDKSFSVN 156
IP A G YTYF+KG YW+F+++ SV
Sbjct: 520 IPQAPQGAFISKEGYYTYFYKGRDYWKFDNQKLSVE 555
>sp|Q9XT90|MMP14_PIG Matrix metalloproteinase-14 OS=Sus scrofa GN=MMP14 PE=2 SV=1
Length = 580
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/156 (41%), Positives = 98/156 (62%), Gaps = 4/156 (2%)
Query: 3 YWKLTDDGIAEGYPKLISKSWIGLPGQIDAAFTYSKNGKTYFFKGSKYWRYTGKSMDDGY 62
+W++ + + +GYP I + W GLP I+ A+ K+GK FFKG K+W + S++ GY
Sbjct: 339 FWRVRKNQVMDGYPMPIGQFWRGLPASINTAYE-RKDGKFVFFKGDKHWVFDEASLEPGY 397
Query: 63 PKDISEGFTGIP-DNIDAALVWSGNGKIYFFKGSKFWKFDPSSKPPVKSTYPKPTSNWEG 121
PK I E +P D IDAAL W NGK YFF+G+K+++F+ + V S YPK WEG
Sbjct: 398 PKHIKELGRRLPTDKIDAALFWMPNGKDYFFRGNKYYRFNEELR-AVDSEYPKNIKVWEG 456
Query: 122 IPDNIDAALHYTNG-YTYFFKGSQYWRFNDKSFSVN 156
IP++ + ++ +TYF+KG++YW+FN++ V
Sbjct: 457 IPESPRGSFMGSDEVFTYFYKGNKYWKFNNQKLKVE 492
>sp|Q499S5|MMP11_RAT Stromelysin-3 OS=Rattus norvegicus GN=Mmp11 PE=1 SV=1
Length = 491
Score = 115 bits (287), Expect = 1e-25, Method: Composition-based stats.
Identities = 61/148 (41%), Positives = 89/148 (60%), Gaps = 7/148 (4%)
Query: 4 WKLTDDGIAEGYPKLISKSWIGLPGQIDAAFTYSKNGKTYFFKGSKYWRYTGKSMDDGYP 63
W+L + GYP L S+ W GLP +DAAF ++ G+ +FF+G++YW Y G+ G P
Sbjct: 320 WRLRSGQLQPGYPALASRHWQGLPSPVDAAFEDAQ-GQIWFFQGAQYWVYDGEKPVLG-P 377
Query: 64 KDISE-GFTGIPDNIDAALVWSG-NGKIYFFKGSKFWKFDPSSKPPVKSTYPKPTSNWEG 121
+S+ G G P + AALVW KIYFF+G +W+F P ++ V + P+ T++W G
Sbjct: 378 APLSKLGLQGSP--VHAALVWGPEKNKIYFFRGGDYWRFHPRTQR-VDNPVPRRTTDWRG 434
Query: 122 IPDNIDAALHYTNGYTYFFKGSQYWRFN 149
+P IDAA GY YF +G YW+F+
Sbjct: 435 VPSEIDAAFQDAEGYAYFLRGHLYWKFD 462
>sp|O54732|MMP15_MOUSE Matrix metalloproteinase-15 OS=Mus musculus GN=Mmp15 PE=2 SV=1
Length = 657
Score = 114 bits (284), Expect = 3e-25, Method: Composition-based stats.
Identities = 57/151 (37%), Positives = 91/151 (60%), Gaps = 4/151 (2%)
Query: 3 YWKLTDDGIAEGYPKLISKSWIGLPGQIDAAFTYSKNGKTYFFKGSKYWRYTGKSMDDGY 62
+W++ + + + YP I W GLPG I AA+ ++G FFKG++YW + +++ GY
Sbjct: 388 FWRVRHNRVLDNYPMPIGHFWRGLPGNISAAYE-RQDGHFVFFKGNRYWLFREANLEPGY 446
Query: 63 PKDISEGFTGIP-DNIDAALVWSGNGKIYFFKGSKFWKFDPSSKPPVKSTYPKPTSNWEG 121
P+ +S T IP D ID A+ W G +FF+ ++W+F+ ++ YPKP S W+G
Sbjct: 447 PQPLSSYGTDIPYDRIDTAIWWEPTGHTFFFQADRYWRFNEETQHG-DPGYPKPISVWQG 505
Query: 122 IPDNIDAA-LHYTNGYTYFFKGSQYWRFNDK 151
IP + A L YTYF+KG++YW+FN++
Sbjct: 506 IPTSPKGAFLSNDAAYTYFYKGTKYWKFNNE 536
Score = 72.8 bits (177), Expect = 9e-13, Method: Composition-based stats.
Identities = 43/116 (37%), Positives = 67/116 (57%), Gaps = 7/116 (6%)
Query: 40 GKTYFFKGSKYWRYTGKSMDDGYPKDISEGFTGIPDNIDAALVWSGNGKIYFFKGSKFWK 99
G+ + FKG +WR + D YP I + G+P NI AA +G FFKG+++W
Sbjct: 378 GEMFVFKGRWFWRVRHNRVLDNYPMPIGHFWRGLPGNISAAYE-RQDGHFVFFKGNRYWL 436
Query: 100 FDPSSKPPVKSTYPKPTSNW-EGIP-DNIDAALHYT-NGYTYFFKGSQYWRFNDKS 152
F ++ P YP+P S++ IP D ID A+ + G+T+FF+ +YWRFN+++
Sbjct: 437 FREANLEP---GYPQPLSSYGTDIPYDRIDTAIWWEPTGHTFFFQADRYWRFNEET 489
Score = 52.0 bits (123), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/85 (34%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 3 YWKLTDDGIA--EGYPKLISKSWIGLPGQIDAAFTYSKNGKTYFFKGSKYWRYTGK--SM 58
YW+ ++ GYPK IS W G+P AF + TYF+KG+KYW++ + M
Sbjct: 482 YWRFNEETQHGDPGYPKPIS-VWQGIPTSPKGAFLSNDAAYTYFYKGTKYWKFNNERLRM 540
Query: 59 DDGYPKDISEGFTGIPDNIDAALVW 83
+ G+PK I F G ++++ W
Sbjct: 541 EPGHPKSILRDFMGCQEHVEPRSRW 565
Score = 50.1 bits (118), Expect = 7e-06, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 40/75 (53%), Gaps = 8/75 (10%)
Query: 87 GKIYFFKGSKFWKFDPSSKPPVKSTYPKPTSN-WEGIPDNIDAALHYTNGYTYFFKGSQY 145
G+++ FKG FW+ + V YP P + W G+P NI AA +G+ FFKG++Y
Sbjct: 378 GEMFVFKGRWFWRVRHNR---VLDNYPMPIGHFWRGLPGNISAAYERQDGHFVFFKGNRY 434
Query: 146 WRFNDKSFSVNCRPG 160
W F + N PG
Sbjct: 435 WLFRE----ANLEPG 445
>sp|Q9JHI0|MMP19_MOUSE Matrix metalloproteinase-19 OS=Mus musculus GN=Mmp19 PE=2 SV=1
Length = 527
Score = 114 bits (284), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 87/151 (57%), Gaps = 8/151 (5%)
Query: 2 HYWKLTDDGIAEGYPKLISKSWIGLPGQIDAAFTYSKNGKTYFFKGSKYWRYTGKSMDDG 61
+ W +TD G + IS W GLPG +DAA + +T+FFKG+K WRY M G
Sbjct: 311 YVWTVTDSGPGPLFQ--ISALWEGLPGNLDAAVYSPRTRRTHFFKGNKVWRYVDFKMSPG 368
Query: 62 YPKDISEGFTGIPDNIDAALVWSGNGKIYFFKGSKFWKFDPSSKPPVKSTYPKPTSN-WE 120
+P F + N+DAAL W N K++ FKGS +W++D ++ + S YPKP +
Sbjct: 369 FPMK----FNRVEPNLDAALYWPVNQKVFLFKGSGYWQWDELARTDL-SRYPKPIKELFT 423
Query: 121 GIPDNIDAALHYTNGYTYFFKGSQYWRFNDK 151
G+PD AA+ + +G YFFKG +YWR N +
Sbjct: 424 GVPDRPSAAMSWQDGQVYFFKGKEYWRLNQQ 454
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 5/76 (6%)
Query: 80 ALVWSGNGKIYFFKGSKFWKFDPSSKPPVKSTYPKPTSNWEGIPDNIDAALHY-TNGYTY 138
A+V GK Y FKG W S P+ ++ WEG+P N+DAA++ T+
Sbjct: 295 AMVLGPRGKTYAFKGDYVWTVTDSGPGPLFQI----SALWEGLPGNLDAAVYSPRTRRTH 350
Query: 139 FFKGSQYWRFNDKSFS 154
FFKG++ WR+ D S
Sbjct: 351 FFKGNKVWRYVDFKMS 366
>sp|Q02853|MMP11_MOUSE Stromelysin-3 OS=Mus musculus GN=Mmp11 PE=1 SV=2
Length = 492
Score = 114 bits (284), Expect = 4e-25, Method: Composition-based stats.
Identities = 60/148 (40%), Positives = 89/148 (60%), Gaps = 7/148 (4%)
Query: 4 WKLTDDGIAEGYPKLISKSWIGLPGQIDAAFTYSKNGKTYFFKGSKYWRYTGKSMDDGYP 63
W+L + GYP L S+ W GLP +DAAF ++ G+ +FF+G++YW Y G+ G P
Sbjct: 321 WRLRSGRLQPGYPALASRHWQGLPSPVDAAFEDAQ-GQIWFFQGAQYWVYDGEKPVLG-P 378
Query: 64 KDISE-GFTGIPDNIDAALVWSG-NGKIYFFKGSKFWKFDPSSKPPVKSTYPKPTSNWEG 121
+S+ G G P + AALVW KIYFF+G +W+F P ++ V + P+ +++W G
Sbjct: 379 APLSKLGLQGSP--VHAALVWGPEKNKIYFFRGGDYWRFHPRTQR-VDNPVPRRSTDWRG 435
Query: 122 IPDNIDAALHYTNGYTYFFKGSQYWRFN 149
+P IDAA GY YF +G YW+F+
Sbjct: 436 VPSEIDAAFQDAEGYAYFLRGHLYWKFD 463
>sp|P24347|MMP11_HUMAN Stromelysin-3 OS=Homo sapiens GN=MMP11 PE=1 SV=3
Length = 488
Score = 112 bits (281), Expect = 7e-25, Method: Composition-based stats.
Identities = 61/148 (41%), Positives = 88/148 (59%), Gaps = 7/148 (4%)
Query: 4 WKLTDDGIAEGYPKLISKSWIGLPGQIDAAFTYSKNGKTYFFKGSKYWRYTGKSMDDGYP 63
W+L + GYP L S+ W GLP +DAAF ++ G +FF+G++YW Y G+ G P
Sbjct: 317 WRLRGGQLQPGYPALASRHWQGLPSPVDAAFEDAQ-GHIWFFQGAQYWVYDGEKPVLG-P 374
Query: 64 KDISE-GFTGIPDNIDAALVWSG-NGKIYFFKGSKFWKFDPSSKPPVKSTYPKPTSNWEG 121
++E G P + AALVW KIYFF+G +W+F PS++ V S P+ ++W G
Sbjct: 375 APLTELGLVRFP--VHAALVWGPEKNKIYFFRGRDYWRFHPSTRR-VDSPVPRRATDWRG 431
Query: 122 IPDNIDAALHYTNGYTYFFKGSQYWRFN 149
+P IDAA +GY YF +G YW+F+
Sbjct: 432 VPSEIDAAFQDADGYAYFLRGRLYWKFD 459
>sp|P51511|MMP15_HUMAN Matrix metalloproteinase-15 OS=Homo sapiens GN=MMP15 PE=1 SV=1
Length = 669
Score = 111 bits (277), Expect = 2e-24, Method: Composition-based stats.
Identities = 55/151 (36%), Positives = 91/151 (60%), Gaps = 4/151 (2%)
Query: 3 YWKLTDDGIAEGYPKLISKSWIGLPGQIDAAFTYSKNGKTYFFKGSKYWRYTGKSMDDGY 62
+W++ + + + YP I W GLPG I AA+ ++G+ FFKG +YW + +++ GY
Sbjct: 392 FWRVRHNRVLDNYPMPIGHFWRGLPGDISAAYE-RQDGRFVFFKGDRYWLFREANLEPGY 450
Query: 63 PKDISEGFTGIP-DNIDAALVWSGNGKIYFFKGSKFWKFDPSSKPPVKSTYPKPTSNWEG 121
P+ ++ GIP D ID A+ W G +FF+ ++W+F+ ++ YPKP S W+G
Sbjct: 451 PQPLTSYGLGIPYDRIDTAIWWEPTGHTFFFQEDRYWRFNEETQRG-DPGYPKPISVWQG 509
Query: 122 IPDNIDAA-LHYTNGYTYFFKGSQYWRFNDK 151
IP + A L YTYF+KG++YW+F+++
Sbjct: 510 IPASPKGAFLSNDAAYTYFYKGTKYWKFDNE 540
Score = 72.4 bits (176), Expect = 1e-12, Method: Composition-based stats.
Identities = 44/116 (37%), Positives = 67/116 (57%), Gaps = 7/116 (6%)
Query: 40 GKTYFFKGSKYWRYTGKSMDDGYPKDISEGFTGIPDNIDAALVWSGNGKIYFFKGSKFWK 99
G+ + FKG +WR + D YP I + G+P +I AA +G+ FFKG ++W
Sbjct: 382 GEMFVFKGRWFWRVRHNRVLDNYPMPIGHFWRGLPGDISAAYE-RQDGRFVFFKGDRYWL 440
Query: 100 FDPSSKPPVKSTYPKP-TSNWEGIP-DNIDAALHYT-NGYTYFFKGSQYWRFNDKS 152
F ++ P YP+P TS GIP D ID A+ + G+T+FF+ +YWRFN+++
Sbjct: 441 FREANLEP---GYPQPLTSYGLGIPYDRIDTAIWWEPTGHTFFFQEDRYWRFNEET 493
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 3 YWKLTDDGIA--EGYPKLISKSWIGLPGQIDAAFTYSKNGKTYFFKGSKYWRYTGK--SM 58
YW+ ++ GYPK IS W G+P AF + TYF+KG+KYW++ + M
Sbjct: 486 YWRFNEETQRGDPGYPKPIS-VWQGIPASPKGAFLSNDAAYTYFYKGTKYWKFDNERLRM 544
Query: 59 DDGYPKDISEGFTGIPDNIDAALVW 83
+ GYPK I F G ++++ W
Sbjct: 545 EPGYPKSILRDFMGCQEHVEPGPRW 569
>sp|P29788|VTNC_MOUSE Vitronectin OS=Mus musculus GN=Vtn PE=1 SV=2
Length = 478
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 76/111 (68%), Gaps = 7/111 (6%)
Query: 2 HYWKLTDDGIAEGYPKLISKSWIGLPGQIDAAFT-YSKNGKTYFFKGSKYWRYTGKSMDD 60
+ ++L + + GYPKLI W G+ G IDAAFT + GKTY FKGS+YWR+ +D
Sbjct: 178 YCYELDETAVRPGYPKLIQDVW-GIEGPIDAAFTRINCQGKTYLFKGSQYWRFEDGVLDP 236
Query: 61 GYPKDISEGFTGIPDNIDAALV-----WSGNGKIYFFKGSKFWKFDPSSKP 106
GYP++ISEGF+GIPDN+DAA +SG ++YFFKG ++W+++ +P
Sbjct: 237 GYPRNISEGFSGIPDNVDAAFALPAHRYSGRERVYFFKGKQYWEYEFQQQP 287
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 76/152 (50%), Gaps = 14/152 (9%)
Query: 6 LTDDGIAEGYPKLISKSWIGLPGQIDAAFTYSKNGKTYFFKGSKYWRYTGKSMDDGYPKD 65
L D +G P+ + G+ AFT KNG + F+G + ++ GYPK
Sbjct: 137 LRPDTTDQGTPEFPEEELCS--GKPFDAFTDLKNGSLFAFRGQYCYELDETAVRPGYPKL 194
Query: 66 ISEGFTGIPDNIDAALV-WSGNGKIYFFKGSKFWKFDPSSKPPVKSTYPKPTSN-WEGIP 123
I + + GI IDAA + GK Y FKGS++W+F+ P YP+ S + GIP
Sbjct: 195 IQDVW-GIEGPIDAAFTRINCQGKTYLFKGSQYWRFEDGVLDP---GYPRNISEGFSGIP 250
Query: 124 DNIDAAL----HYTNG--YTYFFKGSQYWRFN 149
DN+DAA H +G YFFKG QYW +
Sbjct: 251 DNVDAAFALPAHRYSGRERVYFFKGKQYWEYE 282
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 38/67 (56%), Gaps = 5/67 (7%)
Query: 86 NGKIYFFKGSKFWKFDPSSKPPVKSTYPKPTSNWEGIPDNIDAALHYTN--GYTYFFKGS 143
NG ++ F+G ++ D ++ V+ YPK + GI IDAA N G TY FKGS
Sbjct: 168 NGSLFAFRGQYCYELDETA---VRPGYPKLIQDVWGIEGPIDAAFTRINCQGKTYLFKGS 224
Query: 144 QYWRFND 150
QYWRF D
Sbjct: 225 QYWRFED 231
Score = 35.0 bits (79), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
Query: 1 LHYWKLTDDGIAEGYPKLISKSWIGLPGQIDAAFT 35
L +W + DG E P+ IS++W G+PG++DAA
Sbjct: 318 LLFWGRSSDGARE--PQFISRNWHGVPGKVDAAMA 350
>sp|Q9ULZ9|MMP17_HUMAN Matrix metalloproteinase-17 OS=Homo sapiens GN=MMP17 PE=1 SV=4
Length = 603
Score = 108 bits (271), Expect = 1e-23, Method: Composition-based stats.
Identities = 52/158 (32%), Positives = 91/158 (57%), Gaps = 6/158 (3%)
Query: 2 HYWKLTDD-GIAEGYPKLISKSWIGLP---GQIDAAFTYSKNGKTYFFKGSKYWRYTGKS 57
++W+LT D + P + + W GLP +DA + + + K FFKG +YW + +
Sbjct: 353 YFWRLTRDRHLVSLQPAQMHRFWRGLPLHLDSVDAVYERTSDHKIVFFKGDRYWVFKDNN 412
Query: 58 MDDGYPKDISEGFTGIPDNIDAALVWSGNGKIYFFKGSKFWKFDPSSKPPVKSTYPKPTS 117
+++GYP+ +S+ F+ P IDAA W+ N + YFFK +W++D ++ + YP +
Sbjct: 413 VEEGYPRPVSD-FSLPPGGIDAAFSWAHNDRTYFFKDQLYWRYDDHTRH-MDPGYPAQSP 470
Query: 118 NWEGIPDNIDAALHYTNGYTYFFKGSQYWRFNDKSFSV 155
W G+P +D A+ +++G +YFF+G +YW+ D V
Sbjct: 471 LWRGVPSTLDDAMRWSDGASYFFRGQEYWKVLDGELEV 508
>sp|Q11005|MMP11_XENLA Stromelysin-3 OS=Xenopus laevis GN=mmp11 PE=1 SV=1
Length = 477
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 84/150 (56%), Gaps = 10/150 (6%)
Query: 4 WKLTDDGIAEGYPKLISKSWIGLPGQIDAAFTYSKNGKTYFFKGSKYWRYTGKSMDDG-Y 62
W+L + GYP L S+ W G+P +DAAF S G +FF GS++W + GK G +
Sbjct: 302 WRLRGGKLQNGYPALASRHWRGIPDTVDAAFEDSV-GNIWFFYGSQFWVFDGKLQASGPF 360
Query: 63 P-KDISEGFTGIPDNIDAALVW--SGNGKIYFFKGSKFWKFDPSSKPPVKSTYPKPTSNW 119
P DI T I AA VW N K Y F+G ++W+F+P ++ V+S + + +W
Sbjct: 361 PITDIGISVT----QIQAAFVWGTEKNKKTYLFRGGEYWRFNPETRR-VESRHSRRIGDW 415
Query: 120 EGIPDNIDAALHYTNGYTYFFKGSQYWRFN 149
G+P IDAA GY YF KG QYW+F+
Sbjct: 416 RGVPKGIDAAFQDEQGYAYFVKGRQYWKFD 445
>sp|Q90611|MMP2_CHICK 72 kDa type IV collagenase OS=Gallus gallus GN=MMP2 PE=1 SV=1
Length = 663
Score = 106 bits (265), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 57/144 (39%), Positives = 81/144 (56%), Gaps = 6/144 (4%)
Query: 16 PKLISKSWIGLPGQIDAAFTYSKNGKTYFFKGSKYWRYTGKSMDDGYPKDISEGFTGIP- 74
P L++ W LP +IDA + ++ K FF G++YW YT ++D GYPK ++ G+P
Sbjct: 509 PLLVATFWPDLPEKIDAVYESPQDEKAVFFAGNEYWVYTASNLDRGYPKKLTS--LGLPP 566
Query: 75 --DNIDAALVWSGNGKIYFFKGSKFWKFDPSSKPPVKSTYPKPTSNWEGIPDNIDAALHY 132
IDAA W N K Y F G ++WK++ K +T +W G+PDN+DA L
Sbjct: 567 DVQRIDAAFNWGRNKKTYIFSGDRYWKYNEEKKKMELATPKFIADSWNGVPDNLDAVLGL 626
Query: 133 TN-GYTYFFKGSQYWRFNDKSFSV 155
T+ GYTYFFK Y + DKS +
Sbjct: 627 TDSGYTYFFKDQYYLQMEDKSLKI 650
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 70/126 (55%), Gaps = 9/126 (7%)
Query: 2 HYWKLTDDGIAEGYPKLISKSWIGLP---GQIDAAFTYSKNGKTYFFKGSKYWRYTG--K 56
YW T + GYPK ++ +GLP +IDAAF + +N KTY F G +YW+Y K
Sbjct: 542 EYWVYTASNLDRGYPKKLTS--LGLPPDVQRIDAAFNWGRNKKTYIFSGDRYWKYNEEKK 599
Query: 57 SMDDGYPKDISEGFTGIPDNIDAALVWSGNGKIYFFKGSKFWKFDPSSKPPVKSTYPKPT 116
M+ PK I++ + G+PDN+DA L + +G YFFK + + + S VK K +
Sbjct: 600 KMELATPKFIADSWNGVPDNLDAVLGLTDSGYTYFFKDQYYLQMEDKSLKIVK--IGKIS 657
Query: 117 SNWEGI 122
S+W G
Sbjct: 658 SDWLGC 663
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 57/116 (49%), Gaps = 6/116 (5%)
Query: 39 NGKTYFFKGSKYWRYTGKSMDDGYPKDISEGFTGIPDNIDAALVWSGNGKIYFFKGSKFW 98
G+ +FFK WR P ++ + +P+ IDA + K FF G+++W
Sbjct: 485 RGEIFFFKDRFMWRTVNPRGKPTGPLLVATFWPDLPEKIDAVYESPQDEKAVFFAGNEYW 544
Query: 99 KFDPSSKPPVKSTYPKPTSNWEGIPD--NIDAALHY-TNGYTYFFKGSQYWRFNDK 151
+ S+ + YPK ++ PD IDAA ++ N TY F G +YW++N++
Sbjct: 545 VYTASN---LDRGYPKKLTSLGLPPDVQRIDAAFNWGRNKKTYIFSGDRYWKYNEE 597
>sp|P48819|VTNC_PIG Vitronectin OS=Sus scrofa GN=VTN PE=1 SV=1
Length = 459
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 53/112 (47%), Positives = 75/112 (66%), Gaps = 7/112 (6%)
Query: 1 LHYWKLTDDGIAEGYPKLISKSWIGLPGQIDAAFT-YSKNGKTYFFKGSKYWRYTGKSMD 59
L+ ++L + + GYPKLI W G+ G IDAAFT + GKTY FKGS+YWR+ +D
Sbjct: 155 LYCYELDEKAVRPGYPKLIQDVW-GIKGPIDAAFTRINCQGKTYLFKGSQYWRFDDGVLD 213
Query: 60 DGYPKDISEGFTGIPDNIDAALV-----WSGNGKIYFFKGSKFWKFDPSSKP 106
YP++ISEGF GIPD++DAAL +SG ++YFFKG ++W++ +P
Sbjct: 214 PNYPREISEGFKGIPDDVDAALALPAHSYSGRERVYFFKGKQYWEYVFQQQP 265
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 70/124 (56%), Gaps = 12/124 (9%)
Query: 33 AFTYSKNGKTYFFKGSKYWRYTGKSMDDGYPKDISEGFTGIPDNIDAALVW-SGNGKIYF 91
AFT KNG + F+G + K++ GYPK I + + GI IDAA + GK Y
Sbjct: 140 AFTNLKNGSVFAFRGLYCYELDEKAVRPGYPKLIQDVW-GIKGPIDAAFTRINCQGKTYL 198
Query: 92 FKGSKFWKFDPSSKPPVKSTYPKPTSN-WEGIPDNIDAAL----HYTNG--YTYFFKGSQ 144
FKGS++W+FD P YP+ S ++GIPD++DAAL H +G YFFKG Q
Sbjct: 199 FKGSQYWRFDDGVLDP---NYPREISEGFKGIPDDVDAALALPAHSYSGRERVYFFKGKQ 255
Query: 145 YWRF 148
YW +
Sbjct: 256 YWEY 259
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Query: 86 NGKIYFFKGSKFWKFDPSSKPPVKSTYPKPTSNWEGIPDNIDAALHYTN--GYTYFFKGS 143
NG ++ F+G ++ D + V+ YPK + GI IDAA N G TY FKGS
Sbjct: 146 NGSVFAFRGLYCYELDEKA---VRPGYPKLIQDVWGIKGPIDAAFTRINCQGKTYLFKGS 202
Query: 144 QYWRFNDKSFSVN 156
QYWRF+D N
Sbjct: 203 QYWRFDDGVLDPN 215
Score = 33.5 bits (75), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Query: 1 LHYWKLTDDGIAEGYPKLISKSWIGLPGQIDAAFT 35
L +W + G E P++IS+ W+GLP Q+DAA
Sbjct: 296 LLFWSHSFGGAIE--PRVISQDWLGLPEQVDAAMA 328
>sp|P22458|VTNC_RABIT Vitronectin OS=Oryctolagus cuniculus GN=VTN PE=1 SV=1
Length = 475
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 53/109 (48%), Positives = 73/109 (66%), Gaps = 7/109 (6%)
Query: 4 WKLTDDGIAEGYPKLISKSWIGLPGQIDAAFT-YSKNGKTYFFKGSKYWRYTGKSMDDGY 62
++L + + GYPKLI W G+ G IDAAFT + GKTY FKGS+YWR+ +D Y
Sbjct: 181 YELDETAVRPGYPKLIQDVW-GIEGPIDAAFTRINCQGKTYLFKGSQYWRFEDGILDPDY 239
Query: 63 PKDISEGFTGIPDNIDAALV-----WSGNGKIYFFKGSKFWKFDPSSKP 106
P++ISEGF+GIPDN+DAA +SG ++YFFKG K+W++ +P
Sbjct: 240 PRNISEGFSGIPDNVDAAFALPAHSYSGRERVYFFKGDKYWEYQFQQQP 288
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 67/125 (53%), Gaps = 12/125 (9%)
Query: 33 AFTYSKNGKTYFFKGSKYWRYTGKSMDDGYPKDISEGFTGIPDNIDAALVW-SGNGKIYF 91
AFT KNG + F+G + ++ GYPK I + + GI IDAA + GK Y
Sbjct: 163 AFTDLKNGSLFAFRGQYCYELDETAVRPGYPKLIQDVW-GIEGPIDAAFTRINCQGKTYL 221
Query: 92 FKGSKFWKFDPSSKPPVKSTYPKPTSN-WEGIPDNIDAAL----HYTNG--YTYFFKGSQ 144
FKGS++W+F+ P YP+ S + GIPDN+DAA H +G YFFKG +
Sbjct: 222 FKGSQYWRFEDGILDP---DYPRNISEGFSGIPDNVDAAFALPAHSYSGRERVYFFKGDK 278
Query: 145 YWRFN 149
YW +
Sbjct: 279 YWEYQ 283
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 38/67 (56%), Gaps = 5/67 (7%)
Query: 86 NGKIYFFKGSKFWKFDPSSKPPVKSTYPKPTSNWEGIPDNIDAALHYTN--GYTYFFKGS 143
NG ++ F+G ++ D ++ V+ YPK + GI IDAA N G TY FKGS
Sbjct: 169 NGSLFAFRGQYCYELDETA---VRPGYPKLIQDVWGIEGPIDAAFTRINCQGKTYLFKGS 225
Query: 144 QYWRFND 150
QYWRF D
Sbjct: 226 QYWRFED 232
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 66/145 (45%), Gaps = 19/145 (13%)
Query: 2 HYWKLTDDGIAEGYPKLISKSWIGLPGQIDAAF-----TYSKNGKTYFFKGSKYWRYTGK 56
YW+ D + YP+ IS+ + G+P +DAAF +YS + YFFKG KYW Y +
Sbjct: 226 QYWRFEDGILDPDYPRNISEGFSGIPDNVDAAFALPAHSYSGRERVYFFKGDKYWEYQFQ 285
Query: 57 SMDDGYPKDISEGFTGIPDNIDAALVWSGNGKIYFFKGSKFWKFDPSSKPPVKSTYPKPT 116
++ EG + + V+ ++ +K +P + P+
Sbjct: 286 QQPS---QEECEGSS-------LSAVFEHFAMLHRDSWEDIFKLLFWGRPSGGARQPQFI 335
Query: 117 S-NWEGIPDNIDAALH---YTNGYT 137
S +W G+P +DAA+ Y +G T
Sbjct: 336 SRDWHGVPGKVDAAMAGRIYISGLT 360
>sp|P04004|VTNC_HUMAN Vitronectin OS=Homo sapiens GN=VTN PE=1 SV=1
Length = 478
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 52/109 (47%), Positives = 73/109 (66%), Gaps = 7/109 (6%)
Query: 4 WKLTDDGIAEGYPKLISKSWIGLPGQIDAAFT-YSKNGKTYFFKGSKYWRYTGKSMDDGY 62
++L + + GYPKLI W G+ G IDAAFT + GKTY FKGS+YWR+ +D Y
Sbjct: 181 YELDEKAVRPGYPKLIRDVW-GIEGPIDAAFTRINCQGKTYLFKGSQYWRFEDGVLDPDY 239
Query: 63 PKDISEGFTGIPDNIDAALV-----WSGNGKIYFFKGSKFWKFDPSSKP 106
P++IS+GF GIPDN+DAAL +SG ++YFFKG ++W++ +P
Sbjct: 240 PRNISDGFDGIPDNVDAALALPAHSYSGRERVYFFKGKQYWEYQFQHQP 288
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/125 (41%), Positives = 71/125 (56%), Gaps = 12/125 (9%)
Query: 33 AFTYSKNGKTYFFKGSKYWRYTGKSMDDGYPKDISEGFTGIPDNIDAALVW-SGNGKIYF 91
AFT KNG + F+G + K++ GYPK I + + GI IDAA + GK Y
Sbjct: 163 AFTDLKNGSLFAFRGQYCYELDEKAVRPGYPKLIRDVW-GIEGPIDAAFTRINCQGKTYL 221
Query: 92 FKGSKFWKFDPSSKPPVKSTYPKPTSN-WEGIPDNIDAAL----HYTNG--YTYFFKGSQ 144
FKGS++W+F+ P YP+ S+ ++GIPDN+DAAL H +G YFFKG Q
Sbjct: 222 FKGSQYWRFEDGVLDP---DYPRNISDGFDGIPDNVDAALALPAHSYSGRERVYFFKGKQ 278
Query: 145 YWRFN 149
YW +
Sbjct: 279 YWEYQ 283
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
Query: 86 NGKIYFFKGSKFWKFDPSSKPPVKSTYPKPTSNWEGIPDNIDAALHYTN--GYTYFFKGS 143
NG ++ F+G ++ D + V+ YPK + GI IDAA N G TY FKGS
Sbjct: 169 NGSLFAFRGQYCYELDEKA---VRPGYPKLIRDVWGIEGPIDAAFTRINCQGKTYLFKGS 225
Query: 144 QYWRFND 150
QYWRF D
Sbjct: 226 QYWRFED 232
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Query: 2 HYWKLTDDGIAEGYPKLISKSWIGLPGQIDAAF-----TYSKNGKTYFFKGSKYWRY 53
YW+ D + YP+ IS + G+P +DAA +YS + YFFKG +YW Y
Sbjct: 226 QYWRFEDGVLDPDYPRNISDGFDGIPDNVDAALALPAHSYSGRERVYFFKGKQYWEY 282
Score = 34.3 bits (77), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Query: 1 LHYWKLTDDGIAEGYPKLISKSWIGLPGQIDAAFT 35
L +W T G + P+ IS+ W G+PGQ+DAA
Sbjct: 319 LLFWGRTSAGTRQ--PQFISRDWHGVPGQVDAAMA 351
>sp|Q99542|MMP19_HUMAN Matrix metalloproteinase-19 OS=Homo sapiens GN=MMP19 PE=1 SV=1
Length = 508
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 85/151 (56%), Gaps = 8/151 (5%)
Query: 2 HYWKLTDDGIAEGYPKLISKSWIGLPGQIDAAFTYSKNGKTYFFKGSKYWRYTGKSMDDG 61
+ W ++D G + +S W GLPG +DAA + +FFKG K WRY M G
Sbjct: 311 YVWTVSDSGPGPLF--RVSALWEGLPGNLDAAVYSPRTQWIHFFKGDKVWRYINFKMSPG 368
Query: 62 YPKDISEGFTGIPDNIDAALVWSGNGKIYFFKGSKFWKFDPSSKPPVKSTYPKPTSN-WE 120
+PK ++ + N+DAAL W N K++ FKGS +W++D ++ S+YPKP +
Sbjct: 369 FPKKLNR----VEPNLDAALYWPLNQKVFLFKGSGYWQWDELARTDF-SSYPKPIKGLFT 423
Query: 121 GIPDNIDAALHYTNGYTYFFKGSQYWRFNDK 151
G+P+ AA+ + +G YFFKG YWR N +
Sbjct: 424 GVPNQPSAAMSWQDGRVYFFKGKVYWRLNQQ 454
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 80 ALVWSGNGKIYFFKGSKFWKFDPSSKPPVKSTYPKPTSNWEGIPDNIDAALHY-TNGYTY 138
A++ GK Y FKG W S P+ + ++ WEG+P N+DAA++ + +
Sbjct: 295 AMMLGPRGKTYAFKGDYVWTVSDSGPGPLF----RVSALWEGLPGNLDAAVYSPRTQWIH 350
Query: 139 FFKGSQYWRF 148
FFKG + WR+
Sbjct: 351 FFKGDKVWRY 360
>sp|Q9R0S3|MMP17_MOUSE Matrix metalloproteinase-17 OS=Mus musculus GN=Mmp17 PE=1 SV=3
Length = 578
Score = 104 bits (259), Expect = 3e-22, Method: Composition-based stats.
Identities = 50/153 (32%), Positives = 88/153 (57%), Gaps = 6/153 (3%)
Query: 2 HYWKLTDD-GIAEGYPKLISKSWIGLP---GQIDAAFTYSKNGKTYFFKGSKYWRYTGKS 57
++W+LT D + P + + W GLP +DA + + + K FFKG +YW + +
Sbjct: 357 YFWRLTRDRHLVSLQPAQMHRFWRGLPLHLDSVDAVYERTSDHKIVFFKGDRYWVFKDNN 416
Query: 58 MDDGYPKDISEGFTGIPDNIDAALVWSGNGKIYFFKGSKFWKFDPSSKPPVKSTYPKPTS 117
+++GYP+ +S+ F+ P IDA W+ N + YFFK +W++D ++ + YP
Sbjct: 417 VEEGYPRPVSD-FSLPPGGIDAVFSWAHNDRTYFFKDQLYWRYDDHTRR-MDPGYPAQGP 474
Query: 118 NWEGIPDNIDAALHYTNGYTYFFKGSQYWRFND 150
W G+P +D A+ +++G +YFF+G +YW+ D
Sbjct: 475 LWRGVPSMLDDAMRWSDGASYFFRGQEYWKVLD 507
Score = 72.0 bits (175), Expect = 2e-12, Method: Composition-based stats.
Identities = 41/118 (34%), Positives = 65/118 (55%), Gaps = 8/118 (6%)
Query: 40 GKTYFFKGSKYWRYT-GKSMDDGYPKDISEGFTGIP---DNIDAALVWSGNGKIYFFKGS 95
G+ +FFKG +WR T + + P + + G+P D++DA + + KI FFKG
Sbjct: 348 GEAFFFKGKYFWRLTRDRHLVSLQPAQMHRFWRGLPLHLDSVDAVYERTSDHKIVFFKGD 407
Query: 96 KFWKFDPSSKPPVKSTYPKPTSNWEGIPDNIDAALHYT-NGYTYFFKGSQYWRFNDKS 152
++W F ++ V+ YP+P S++ P IDA + N TYFFK YWR++D +
Sbjct: 408 RYWVFKDNN---VEEGYPRPVSDFSLPPGGIDAVFSWAHNDRTYFFKDQLYWRYDDHT 462
>sp|P33434|MMP2_MOUSE 72 kDa type IV collagenase OS=Mus musculus GN=Mmp2 PE=2 SV=1
Length = 662
Score = 97.1 bits (240), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 82/143 (57%), Gaps = 8/143 (5%)
Query: 16 PKLISKSWIGLPGQIDAAFTYSKNGKTYFFKGSKYWRYTGKSMDDGYPKDISEGFTGIP- 74
P L++ W LP +IDA + + K FF G++YW Y+ +++ GYPK ++ G+P
Sbjct: 508 PLLVATFWPELPEKIDAVYEAPQEEKAVFFAGNEYWVYSASTLERGYPKPLTS--LGLPP 565
Query: 75 --DNIDAALVWSGNGKIYFFKGSKFWKFDPSSKPPVKSTYPKPTSN-WEGIPDNIDAALH 131
+DAA WS N K Y F G KFW+++ K + +PK ++ W IPDN+DA +
Sbjct: 566 DVQQVDAAFNWSKNKKTYIFAGDKFWRYN-EVKKKMDPGFPKLIADSWNAIPDNLDAVVD 624
Query: 132 YT-NGYTYFFKGSQYWRFNDKSF 153
G++YFFKG+ Y + ++S
Sbjct: 625 LQGGGHSYFFKGAYYLKLENQSL 647
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/126 (42%), Positives = 72/126 (57%), Gaps = 9/126 (7%)
Query: 2 HYWKLTDDGIAEGYPKLISKSWIGLP---GQIDAAFTYSKNGKTYFFKGSKYWRY--TGK 56
YW + + GYPK ++ +GLP Q+DAAF +SKN KTY F G K+WRY K
Sbjct: 541 EYWVYSASTLERGYPKPLTS--LGLPPDVQQVDAAFNWSKNKKTYIFAGDKFWRYNEVKK 598
Query: 57 SMDDGYPKDISEGFTGIPDNIDAALVWSGNGKIYFFKGSKFWKFDPSSKPPVKSTYPKPT 116
MD G+PK I++ + IPDN+DA + G G YFFKG+ + K + S VK +
Sbjct: 599 KMDPGFPKLIADSWNAIPDNLDAVVDLQGGGHSYFFKGAYYLKLENQSLKSVK--FGSIK 656
Query: 117 SNWEGI 122
S+W G
Sbjct: 657 SDWLGC 662
>sp|P33436|MMP2_RAT 72 kDa type IV collagenase OS=Rattus norvegicus GN=Mmp2 PE=2 SV=2
Length = 662
Score = 97.1 bits (240), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 82/143 (57%), Gaps = 8/143 (5%)
Query: 16 PKLISKSWIGLPGQIDAAFTYSKNGKTYFFKGSKYWRYTGKSMDDGYPKDISEGFTGIP- 74
P L++ W LP +IDA + + K FF G++YW Y+ +++ GYPK ++ G+P
Sbjct: 508 PLLVATFWPELPEKIDAVYEAPQEEKAVFFAGNEYWVYSASTLERGYPKPLTS--LGLPP 565
Query: 75 --DNIDAALVWSGNGKIYFFKGSKFWKFDPSSKPPVKSTYPKPTSN-WEGIPDNIDAALH 131
+DAA WS N K Y F G KFW+++ K + +PK ++ W IPDN+DA +
Sbjct: 566 DVQQVDAAFNWSKNKKTYIFSGDKFWRYN-EVKKKMDPGFPKLIADSWNAIPDNLDAVVD 624
Query: 132 YT-NGYTYFFKGSQYWRFNDKSF 153
G++YFFKG+ Y + ++S
Sbjct: 625 LQGGGHSYFFKGAYYLKLENQSL 647
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/126 (42%), Positives = 72/126 (57%), Gaps = 9/126 (7%)
Query: 2 HYWKLTDDGIAEGYPKLISKSWIGLP---GQIDAAFTYSKNGKTYFFKGSKYWRY--TGK 56
YW + + GYPK ++ +GLP Q+DAAF +SKN KTY F G K+WRY K
Sbjct: 541 EYWVYSASTLERGYPKPLTS--LGLPPDVQQVDAAFNWSKNKKTYIFSGDKFWRYNEVKK 598
Query: 57 SMDDGYPKDISEGFTGIPDNIDAALVWSGNGKIYFFKGSKFWKFDPSSKPPVKSTYPKPT 116
MD G+PK I++ + IPDN+DA + G G YFFKG+ + K + S VK +
Sbjct: 599 KMDPGFPKLIADSWNAIPDNLDAVVDLQGGGHSYFFKGAYYLKLENQSLKSVK--FGSIK 656
Query: 117 SNWEGI 122
S+W G
Sbjct: 657 SDWLGC 662
>sp|P08253|MMP2_HUMAN 72 kDa type IV collagenase OS=Homo sapiens GN=MMP2 PE=1 SV=2
Length = 660
Score = 96.7 bits (239), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 82/143 (57%), Gaps = 8/143 (5%)
Query: 16 PKLISKSWIGLPGQIDAAFTYSKNGKTYFFKGSKYWRYTGKSMDDGYPKDISEGFTGIP- 74
P L++ W LP +IDA + + K FF G++YW Y+ +++ GYPK ++ G+P
Sbjct: 506 PLLVATFWPELPEKIDAVYEAPQEEKAVFFAGNEYWIYSASTLERGYPKPLTS--LGLPP 563
Query: 75 --DNIDAALVWSGNGKIYFFKGSKFWKFDPSSKPPVKSTYPKPTSN-WEGIPDNIDAALH 131
+DAA WS N K Y F G KFW+++ K + +PK ++ W IPDN+DA +
Sbjct: 564 DVQRVDAAFNWSKNKKTYIFAGDKFWRYN-EVKKKMDPGFPKLIADAWNAIPDNLDAVVD 622
Query: 132 YT-NGYTYFFKGSQYWRFNDKSF 153
G++YFFKG+ Y + ++S
Sbjct: 623 LQGGGHSYFFKGAYYLKLENQSL 645
Score = 87.4 bits (215), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 72/126 (57%), Gaps = 9/126 (7%)
Query: 2 HYWKLTDDGIAEGYPKLISKSWIGLP---GQIDAAFTYSKNGKTYFFKGSKYWRY--TGK 56
YW + + GYPK ++ +GLP ++DAAF +SKN KTY F G K+WRY K
Sbjct: 539 EYWIYSASTLERGYPKPLTS--LGLPPDVQRVDAAFNWSKNKKTYIFAGDKFWRYNEVKK 596
Query: 57 SMDDGYPKDISEGFTGIPDNIDAALVWSGNGKIYFFKGSKFWKFDPSSKPPVKSTYPKPT 116
MD G+PK I++ + IPDN+DA + G G YFFKG+ + K + S VK +
Sbjct: 597 KMDPGFPKLIADAWNAIPDNLDAVVDLQGGGHSYFFKGAYYLKLENQSLKSVK--FGSIK 654
Query: 117 SNWEGI 122
S+W G
Sbjct: 655 SDWLGC 660
>sp|Q9GLE5|MMP2_BOVIN 72 kDa type IV collagenase OS=Bos taurus GN=MMP2 PE=2 SV=1
Length = 661
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 82/143 (57%), Gaps = 8/143 (5%)
Query: 16 PKLISKSWIGLPGQIDAAFTYSKNGKTYFFKGSKYWRYTGKSMDDGYPKDISEGFTGIP- 74
P L++ W LP +IDA + + K FF G++YW Y+ +++ GYPK ++ G+P
Sbjct: 507 PLLVATFWPELPEKIDAVYEDPQEEKAVFFAGNEYWVYSASTLERGYPKPLTS--LGLPP 564
Query: 75 --DNIDAALVWSGNGKIYFFKGSKFWKFDPSSKPPVKSTYPKPTSN-WEGIPDNIDAALH 131
+DAA WS N K Y F G KFW+++ K + +PK ++ W IPDN+DA +
Sbjct: 565 GVQKVDAAFNWSKNKKTYIFAGDKFWRYN-EVKKKMDPGFPKLIADAWNAIPDNLDAVVD 623
Query: 132 YT-NGYTYFFKGSQYWRFNDKSF 153
G++YFFKG+ Y + ++S
Sbjct: 624 LQGGGHSYFFKGAYYLKLENQSL 646
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 72/126 (57%), Gaps = 9/126 (7%)
Query: 2 HYWKLTDDGIAEGYPKLISKSWIGLP---GQIDAAFTYSKNGKTYFFKGSKYWRY--TGK 56
YW + + GYPK ++ +GLP ++DAAF +SKN KTY F G K+WRY K
Sbjct: 540 EYWVYSASTLERGYPKPLTS--LGLPPGVQKVDAAFNWSKNKKTYIFAGDKFWRYNEVKK 597
Query: 57 SMDDGYPKDISEGFTGIPDNIDAALVWSGNGKIYFFKGSKFWKFDPSSKPPVKSTYPKPT 116
MD G+PK I++ + IPDN+DA + G G YFFKG+ + K + S VK +
Sbjct: 598 KMDPGFPKLIADAWNAIPDNLDAVVDLQGGGHSYFFKGAYYLKLENQSLKSVK--FGSIK 655
Query: 117 SNWEGI 122
S+W G
Sbjct: 656 SDWLGC 661
>sp|P50757|MMP2_RABIT 72 kDa type IV collagenase OS=Oryctolagus cuniculus GN=MMP2 PE=2
SV=1
Length = 662
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 86/155 (55%), Gaps = 8/155 (5%)
Query: 4 WKLTDDGIAEGYPKLISKSWIGLPGQIDAAFTYSKNGKTYFFKGSKYWRYTGKSMDDGYP 63
W+ G P L++ W LP +IDA + + K FF G++YW Y+ +++ GYP
Sbjct: 496 WRTVTPGDKPMGPLLVATFWPELPEKIDAVYEAPQEEKAVFFAGNEYWVYSASTLERGYP 555
Query: 64 KDISEGFTGIP---DNIDAALVWSGNGKIYFFKGSKFWKFDPSSKPPVKSTYPKPTSN-W 119
K ++ G+P +DAA WS N K Y F G KFW+++ K + +P+ ++ W
Sbjct: 556 KPLTS--LGLPPDVQRVDAAFNWSKNKKTYIFAGDKFWRYN-EVKKKMDPGFPRLIADAW 612
Query: 120 EGIPDNIDAALHYT-NGYTYFFKGSQYWRFNDKSF 153
IPD++DA + +G++YFFKG+ Y + ++S
Sbjct: 613 NAIPDHLDAVVDLQGSGHSYFFKGTYYLKLENQSL 647
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 68/113 (60%), Gaps = 7/113 (6%)
Query: 2 HYWKLTDDGIAEGYPKLISKSWIGLP---GQIDAAFTYSKNGKTYFFKGSKYWRY--TGK 56
YW + + GYPK ++ +GLP ++DAAF +SKN KTY F G K+WRY K
Sbjct: 541 EYWVYSASTLERGYPKPLTS--LGLPPDVQRVDAAFNWSKNKKTYIFAGDKFWRYNEVKK 598
Query: 57 SMDDGYPKDISEGFTGIPDNIDAALVWSGNGKIYFFKGSKFWKFDPSSKPPVK 109
MD G+P+ I++ + IPD++DA + G+G YFFKG+ + K + S VK
Sbjct: 599 KMDPGFPRLIADAWNAIPDHLDAVVDLQGSGHSYFFKGTYYLKLENQSLKSVK 651
>sp|Q9NPA2|MMP25_HUMAN Matrix metalloproteinase-25 OS=Homo sapiens GN=MMP25 PE=1 SV=1
Length = 562
Score = 90.9 bits (224), Expect = 3e-18, Method: Composition-based stats.
Identities = 50/156 (32%), Positives = 82/156 (52%), Gaps = 10/156 (6%)
Query: 3 YWKLTDDG-IAEGYPKLISKSWIGLPGQI---DAAFTYSKNGKTYFFKGSKYWRYTGKSM 58
+W+L G + P + + W GLP Q+ AA+ ++G+ F G ++W + + +
Sbjct: 339 FWRLQPSGQLVSPRPARLHRFWEGLPAQVRVVQAAYARHRDGRILLFSGPQFWVFQDRQL 398
Query: 59 DDGYPKDISEGFTGIP--DNIDAALVWSGNGKIYFFKGSKFWKFDPSSKPPVKSTYPKPT 116
+ G + ++E G+P + +DA W NGK Y +G ++W++D ++ P YP+
Sbjct: 399 EGG-ARPLTE--LGLPPGEEVDAVFSWPQNGKTYLVRGRQYWRYDEAAARP-DPGYPRDL 454
Query: 117 SNWEGIPDNIDAALHYTNGYTYFFKGSQYWRFNDKS 152
S WEG P + D G TYFFKG+ YWRF S
Sbjct: 455 SLWEGAPPSPDDVTVSNAGDTYFFKGAHYWRFPKNS 490
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/96 (30%), Positives = 41/96 (42%), Gaps = 13/96 (13%)
Query: 73 IPDNIDAALVWSGN--GKIYFFKGSKFWKFDPSSKPPVKSTYPKPT---SNWEGIPDNID 127
IPD + N G+ +FFKG FW+ PS + P+P WEG+P +
Sbjct: 313 IPDRCEGNFDAIANIRGETFFFKGPWFWRLQPSG----QLVSPRPARLHRFWEGLPAQVR 368
Query: 128 ----AALHYTNGYTYFFKGSQYWRFNDKSFSVNCRP 159
A + +G F G Q+W F D+ RP
Sbjct: 369 VVQAAYARHRDGRILLFSGPQFWVFQDRQLEGGARP 404
Score = 37.7 bits (86), Expect = 0.029, Method: Composition-based stats.
Identities = 25/60 (41%), Positives = 32/60 (53%), Gaps = 6/60 (10%)
Query: 2 HYWKLTDDGIAE---GYPKLISKSWIGLPGQIDAAFTYSKNGKTYFFKGSKYWRYTGKSM 58
YW+ D+ A GYP+ +S W G P D T S G TYFFKG+ YWR+ S+
Sbjct: 435 QYWRY-DEAAARPDPGYPRDLSL-WEGAPPSPDDV-TVSNAGDTYFFKGAHYWRFPKNSI 491
>sp|Q9XSZ5|MMP1_HORSE Interstitial collagenase OS=Equus caballus GN=MMP1 PE=2 SV=1
Length = 469
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 83/159 (52%), Gaps = 15/159 (9%)
Query: 13 EGYPKLISKSWIGLPGQIDAAFTYSKNGKTYFFKGSKYWRYTGKSMDDGYPKDI--SEGF 70
E IS W LP + AA+ S + FFKG+KYW G+ + GYPKDI S GF
Sbjct: 311 EAELNFISIFWPQLPNGLQAAYEVSHRDEVRFFKGNKYWAVKGQDVLYGYPKDIHRSFGF 370
Query: 71 TGIPDNIDAALVWSGNGKIYFFKGSKFWKFDPSSKPPVKSTYPKPTS-NWEGIPDNIDAA 129
NIDAA+ GK YFF K+W++D K + + YPK + ++ GI D +DA
Sbjct: 371 PSTVKNIDAAVSEEDTGKTYFFVADKYWRYD-EYKRSMDAGYPKMIADDFPGIGDKVDAV 429
Query: 130 LHYTNGYTYFFKGSQYWRFNDKSFSV----------NCR 158
+G+ YFF G++ ++F+ K+ + NCR
Sbjct: 430 FQ-KDGFFYFFHGTRQYKFDPKTKRILTLQKANSWFNCR 467
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/108 (46%), Positives = 65/108 (60%), Gaps = 8/108 (7%)
Query: 3 YWKLTDDGIAEGYPKLISKSWIGLPG---QIDAAFTYSKNGKTYFFKGSKYWRYTG--KS 57
YW + + GYPK I +S+ G P IDAA + GKTYFF KYWRY +S
Sbjct: 348 YWAVKGQDVLYGYPKDIHRSF-GFPSTVKNIDAAVSEEDTGKTYFFVADKYWRYDEYKRS 406
Query: 58 MDDGYPKDISEGFTGIPDNIDAALVWSGNGKIYFFKGSKFWKFDPSSK 105
MD GYPK I++ F GI D +DA V+ +G YFF G++ +KFDP +K
Sbjct: 407 MDAGYPKMIADDFPGIGDKVDA--VFQKDGFFYFFHGTRQYKFDPKTK 452
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 66/143 (46%), Gaps = 20/143 (13%)
Query: 27 PGQIDAAFTY----SKNGKTYFFKGSKYWRYTGKSMDDGYPKD----ISEGFTGIPDNID 78
P D+ T+ + G+ FFK Y R ++ YP+ IS + +P+ +
Sbjct: 275 PEVCDSKLTFDAITTIRGEVMFFKDRFYMR-----INPYYPEAELNFISIFWPQLPNGLQ 329
Query: 79 AALVWSGNGKIYFFKGSKFWKFDPSSKPPVKSTYPKPTSNWEGIPD---NIDAALHYTN- 134
AA S ++ FFKG+K+W V YPK G P NIDAA+ +
Sbjct: 330 AAYEVSHRDEVRFFKGNKYWAVKGQD---VLYGYPKDIHRSFGFPSTVKNIDAAVSEEDT 386
Query: 135 GYTYFFKGSQYWRFNDKSFSVNC 157
G TYFF +YWR+++ S++
Sbjct: 387 GKTYFFVADKYWRYDEYKRSMDA 409
>sp|Q9H239|MMP28_HUMAN Matrix metalloproteinase-28 OS=Homo sapiens GN=MMP28 PE=2 SV=2
Length = 520
Score = 88.2 bits (217), Expect = 2e-17, Method: Composition-based stats.
Identities = 49/149 (32%), Positives = 81/149 (54%), Gaps = 6/149 (4%)
Query: 2 HYWKLTDDG-IAEGYPKLISKSWIGLPGQIDAAFTYSKNGKTYFFKGSKYWRYTGKSMDD 60
H+W++ DG ++E P+ + + W+GLP I+AA +G YFFKG + WR+ G
Sbjct: 346 HFWEVAADGNVSE--PRPLQERWVGLPPNIEAAAVSLNDGDFYFFKGGRCWRFRGPKPVW 403
Query: 61 GYPKDISEGFTGIPDNIDAALVWSGNGKIYFFKGSKFWKFDPSSKPPVKSTYPKPTSNWE 120
G P+ G G+P + DAAL + ++ FKG++++ V+ YP+ +W
Sbjct: 404 GLPQLCRAG--GLPRHPDAALFFPPLRRLILFKGARYYVL-ARGGLQVEPYYPRSLQDWG 460
Query: 121 GIPDNIDAALHYTNGYTYFFKGSQYWRFN 149
GIP+ + AL +G FF+ +YWR +
Sbjct: 461 GIPEEVSGALPRPDGSIIFFRDDRYWRLD 489
>sp|P03956|MMP1_HUMAN Interstitial collagenase OS=Homo sapiens GN=MMP1 PE=1 SV=3
Length = 469
Score = 87.4 bits (215), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 88/161 (54%), Gaps = 19/161 (11%)
Query: 15 YPKL----ISKSWIGLPGQIDAAFTYSKNGKTYFFKGSKYWRYTGKSMDDGYPKDI--SE 68
YP++ IS W LP ++AA+ ++ + FFKG+KYW G+++ GYPKDI S
Sbjct: 309 YPEVELNFISVFWPQLPNGLEAAYEFADRDEVRFFKGNKYWAVQGQNVLHGYPKDIYSSF 368
Query: 69 GFTGIPDNIDAALVWSGNGKIYFFKGSKFWKFDPSSKPPVKSTYPKPTS-NWEGIPDNID 127
GF +IDAAL GK YFF +K+W++D K + YPK + ++ GI +D
Sbjct: 369 GFPRTVKHIDAALSEENTGKTYFFVANKYWRYD-EYKRSMDPGYPKMIAHDFPGIGHKVD 427
Query: 128 AALHYTNGYTYFFKGSQYWRFNDKSFSV----------NCR 158
A +G+ YFF G++ ++F+ K+ + NCR
Sbjct: 428 AVF-MKDGFFYFFHGTRQYKFDPKTKRILTLQKANSWFNCR 467
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/108 (45%), Positives = 63/108 (58%), Gaps = 8/108 (7%)
Query: 3 YWKLTDDGIAEGYPKLISKSWIGLP---GQIDAAFTYSKNGKTYFFKGSKYWRYTG--KS 57
YW + + GYPK I S+ G P IDAA + GKTYFF +KYWRY +S
Sbjct: 348 YWAVQGQNVLHGYPKDIYSSF-GFPRTVKHIDAALSEENTGKTYFFVANKYWRYDEYKRS 406
Query: 58 MDDGYPKDISEGFTGIPDNIDAALVWSGNGKIYFFKGSKFWKFDPSSK 105
MD GYPK I+ F GI +DA V+ +G YFF G++ +KFDP +K
Sbjct: 407 MDPGYPKMIAHDFPGIGHKVDA--VFMKDGFFYFFHGTRQYKFDPKTK 452
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 70/142 (49%), Gaps = 20/142 (14%)
Query: 27 PGQIDAAFTY----SKNGKTYFFKGSKYWRYTGKSMDDGYPKD----ISEGFTGIPDNID 78
P D+ T+ + G+ FFK Y R + YP+ IS + +P+ ++
Sbjct: 275 PKACDSKLTFDAITTIRGEVMFFKDRFYMR-----TNPFYPEVELNFISVFWPQLPNGLE 329
Query: 79 AALVWSGNGKIYFFKGSKFWKFDPSSKPPVKSTYPKPTSNWEGIP---DNIDAALHYTN- 134
AA ++ ++ FFKG+K+W + V YPK + G P +IDAAL N
Sbjct: 330 AAYEFADRDEVRFFKGNKYWAVQGQN---VLHGYPKDIYSSFGFPRTVKHIDAALSEENT 386
Query: 135 GYTYFFKGSQYWRFNDKSFSVN 156
G TYFF ++YWR+++ S++
Sbjct: 387 GKTYFFVANKYWRYDEYKRSMD 408
>sp|P07152|MMP10_RAT Stromelysin-2 OS=Rattus norvegicus GN=Mmp10 PE=2 SV=1
Length = 476
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 78/156 (50%), Gaps = 3/156 (1%)
Query: 2 HYWKLTDDGIAEGYPKLISKSWIGLPGQIDAAFTYSKNGKTYFFKGSKYWRYTGKSMDDG 61
H+W+ T + LIS W LP +DAA+ + + FKGS++W G + G
Sbjct: 312 HFWRRTQWNPEPEF-HLISAFWPSLPSGLDAAYEANNKDRVLIFKGSQFWAVRGNEVQAG 370
Query: 62 YPKDI-SEGFTGIPDNIDAALVWSGNGKIYFFKGSKFWKFDPSSKPPVKSTYPKPTSNWE 120
YPK I + GF IDAA+ K YFF G K+W+FD + + K T ++
Sbjct: 371 YPKRIHTLGFPPTVKKIDAAVFEKEKKKTYFFVGDKYWRFDETRQLMDKGFPRLITDDFP 430
Query: 121 GIPDNIDAALHYTNGYTYFFKGSQYWRFNDKSFSVN 156
GI +DA LH G+ YFF GS + F+ + +V
Sbjct: 431 GIEPQVDAVLH-AFGFFYFFCGSSQFEFDPNARTVT 465
>sp|O55123|MMP10_MOUSE Stromelysin-2 OS=Mus musculus GN=Mmp10 PE=2 SV=1
Length = 476
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 71/140 (50%), Gaps = 2/140 (1%)
Query: 18 LISKSWIGLPGQIDAAFTYSKNGKTYFFKGSKYWRYTGKSMDDGYPKDI-SEGFTGIPDN 76
LIS W LP +DAA+ FKGS++W G + GYPK I + GF
Sbjct: 327 LISAFWPTLPSDLDAAYEAHNTDSVLIFKGSQFWAVRGNEVQAGYPKGIHTLGFPPTVKK 386
Query: 77 IDAALVWSGNGKIYFFKGSKFWKFDPSSKPPVKSTYPKPTSNWEGIPDNIDAALHYTNGY 136
IDAA+ K YFF G K+W+FD + K + T ++ GI +DA LH G+
Sbjct: 387 IDAAVFEKEKKKTYFFVGDKYWRFDETRHVMDKGFPRQITDDFPGIEPQVDAVLH-EFGF 445
Query: 137 TYFFKGSQYWRFNDKSFSVN 156
YFF+GS + F+ + +V
Sbjct: 446 FYFFRGSSQFEFDPNARTVT 465
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 14/81 (17%)
Query: 74 PDNIDAAL----VWSGNGKIYFFKGSKFWK---FDPSSKPPVKSTYPKPTSNWEGIPDNI 126
PD D AL V + G++ FFK FW+ ++P + + S + W +P ++
Sbjct: 286 PDKCDPALSFDSVSTLRGEVLFFKDRYFWRRSHWNPEPEFHLISAF------WPTLPSDL 339
Query: 127 DAALHYTN-GYTYFFKGSQYW 146
DAA N FKGSQ+W
Sbjct: 340 DAAYEAHNTDSVLIFKGSQFW 360
>sp|Q3U435|MMP25_MOUSE Matrix metalloproteinase-25 OS=Mus musculus GN=Mmp25 PE=2 SV=1
Length = 615
Score = 84.7 bits (208), Expect = 2e-16, Method: Composition-based stats.
Identities = 49/156 (31%), Positives = 79/156 (50%), Gaps = 10/156 (6%)
Query: 3 YWKLTDDG-IAEGYPKLISKSWIGLPGQ---IDAAFTYSKNGKTYFFKGSKYWRYTGKSM 58
+W+L G + P + + W GLP I AA+ +G+ F G ++W + + +
Sbjct: 393 FWRLQPSGQLVSPRPAGLHRFWEGLPTHVKVIQAAYARPLDGRIILFSGPQFWVFQERQL 452
Query: 59 DDGYPKDISEGFTGIP--DNIDAALVWSGNGKIYFFKGSKFWKFDPSSKPPVKSTYPKPT 116
+ G + + E G+P +++DA W NGK Y +G K+W++D + P YP+
Sbjct: 453 E-GAARPLVE--FGLPPGEDVDAVFSWPHNGKTYLIRGQKYWRYDEVAARP-DPGYPRAL 508
Query: 117 SNWEGIPDNIDAALHYTNGYTYFFKGSQYWRFNDKS 152
S W+G P D G TYFFKG+ +WRF + S
Sbjct: 509 SLWDGAPFAPDDVTISNTGDTYFFKGTHFWRFAEGS 544
Score = 43.1 bits (100), Expect = 7e-04, Method: Composition-based stats.
Identities = 31/100 (31%), Positives = 45/100 (45%), Gaps = 17/100 (17%)
Query: 71 TGIPD----NIDAALVWSGNGKIYFFKGSKFWKFDPSSKPPVKSTYPKPTS---NWEGIP 123
T +PD N DA V + G+I+ FKG FW+ PS + P+P WEG+P
Sbjct: 365 TPVPDRCEGNFDA--VANIRGEIFLFKGPWFWRLQPSG----QLVSPRPAGLHRFWEGLP 418
Query: 124 DNID----AALHYTNGYTYFFKGSQYWRFNDKSFSVNCRP 159
++ A +G F G Q+W F ++ RP
Sbjct: 419 THVKVIQAAYARPLDGRIILFSGPQFWVFQERQLEGAARP 458
Score = 36.6 bits (83), Expect = 0.062, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Query: 14 GYPKLISKSWIGLPGQIDAAFTYSKNGKTYFFKGSKYWRYTGKSM 58
GYP+ +S W G P D T S G TYFFKG+ +WR+ S+
Sbjct: 503 GYPRALSL-WDGAPFAPDDV-TISNTGDTYFFKGTHFWRFAEGSV 545
>sp|P13943|MMP1_RABIT Interstitial collagenase OS=Oryctolagus cuniculus GN=MMP1 PE=2 SV=1
Length = 468
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 83/154 (53%), Gaps = 15/154 (9%)
Query: 18 LISKSWIGLPGQIDAAFTYSKNGKTYFFKGSKYWRYTGKSMDDGYPKDI--SEGFTGIPD 75
IS W LP + AA+ + + FFKG+KYW G++ GYPKDI S GF +
Sbjct: 315 FISVFWPHLPNGLQAAYEVAHRDEILFFKGNKYWTVQGQNELPGYPKDIHSSFGFPRSVN 374
Query: 76 NIDAALVWSGNGKIYFFKGSKFWKFDPSSKPPVKSTYPKPTS-NWEGIPDNIDAALHYTN 134
+IDAA+ GK YFF +K+W++D K + + YPK ++ GI + +DA +
Sbjct: 375 HIDAAVSEEDTGKTYFFVANKYWRYD-EYKRSMDAGYPKMIEYDFPGIGNKVDAVFK-KD 432
Query: 135 GYTYFFKGSQYWRFNDKSFSV----------NCR 158
G+ YFF G++ ++F+ K+ + NCR
Sbjct: 433 GFFYFFHGTRQYKFDPKTKRILTLQKANSWFNCR 466
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/108 (45%), Positives = 62/108 (57%), Gaps = 8/108 (7%)
Query: 3 YWKLTDDGIAEGYPKLISKSWIGLP---GQIDAAFTYSKNGKTYFFKGSKYWRYTG--KS 57
YW + GYPK I S+ G P IDAA + GKTYFF +KYWRY +S
Sbjct: 347 YWTVQGQNELPGYPKDIHSSF-GFPRSVNHIDAAVSEEDTGKTYFFVANKYWRYDEYKRS 405
Query: 58 MDDGYPKDISEGFTGIPDNIDAALVWSGNGKIYFFKGSKFWKFDPSSK 105
MD GYPK I F GI + +DA V+ +G YFF G++ +KFDP +K
Sbjct: 406 MDAGYPKMIEYDFPGIGNKVDA--VFKKDGFFYFFHGTRQYKFDPKTK 451
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 22/144 (15%)
Query: 27 PGQIDAAFTYSK----NGKTYFFKGSKYWRYTGKSMDDGYPKDISEGFTGI-----PDNI 77
P D+ T+ G+ FFK Y R + Y ++ F + P+ +
Sbjct: 274 PKVCDSKLTFDAITTIRGEIMFFKDRFYMRA------NPYYSEVELNFISVFWPHLPNGL 327
Query: 78 DAALVWSGNGKIYFFKGSKFWKFDPSSKPPVKSTYPKPTSNWEGIP---DNIDAALHYTN 134
AA + +I FFKG+K+W ++ P YPK + G P ++IDAA+ +
Sbjct: 328 QAAYEVAHRDEILFFKGNKYWTVQGQNELP---GYPKDIHSSFGFPRSVNHIDAAVSEED 384
Query: 135 -GYTYFFKGSQYWRFNDKSFSVNC 157
G TYFF ++YWR+++ S++
Sbjct: 385 TGKTYFFVANKYWRYDEYKRSMDA 408
>sp|O13065|MMP18_XENLA Matrix metalloproteinase-18 OS=Xenopus laevis GN=mmp18 PE=2 SV=1
Length = 467
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/143 (39%), Positives = 71/143 (49%), Gaps = 4/143 (2%)
Query: 12 AEGYPKLISKSWIGLPGQIDAAFTYSKNGKTYFFKGSKYWRYTGKSMDDGYPKDI-SEGF 70
+E + W LP IDAA+ + FKGSKY G + GYP++I S GF
Sbjct: 312 SEAELMFVQAFWPSLPTNIDAAYENPITEQILVFKGSKYTALDGFDVVQGYPRNIYSLGF 371
Query: 71 TGIPDNIDAALVWSGNGKIYFFKGSKFWKFDPSSKPPVKSTYPKPTSN-WEGIPDNIDAA 129
IDAA+ GK YFF K+W +D K K +PK SN + GIPD IDAA
Sbjct: 372 PKTVKRIDAAVHIEQLGKTYFFAAKKYWSYDEDKKQMDKG-FPKQISNDFPGIPDKIDAA 430
Query: 130 LHYTNGYTYFFKGSQYWRFNDKS 152
+Y G YFF G + +N S
Sbjct: 431 FYY-RGRLYFFIGRSQFEYNINS 452
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 4/53 (7%)
Query: 3 YWKLTDD--GIAEGYPKLISKSWIGLPGQIDAAFTYSKNGKTYFFKGSKYWRY 53
YW +D + +G+PK IS + G+P +IDAAF Y G+ YFF G + Y
Sbjct: 398 YWSYDEDKKQMDKGFPKQISNDFPGIPDKIDAAFYY--RGRLYFFIGRSQFEY 448
>sp|P21692|MMP1_PIG Interstitial collagenase OS=Sus scrofa GN=MMP1 PE=1 SV=2
Length = 469
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 84/161 (52%), Gaps = 19/161 (11%)
Query: 15 YPKL----ISKSWIGLPGQIDAAFTYSKNGKTYFFKGSKYWRYTGKSMDDGYPKDI--SE 68
YP++ IS W +P + AA+ + + FFKG+KYW G+ + GYPKDI S
Sbjct: 309 YPEVELNFISVFWPQVPNGLQAAYEIADRDEVRFFKGNKYWAVRGQDVLYGYPKDIHRSF 368
Query: 69 GFTGIPDNIDAALVWSGNGKIYFFKGSKFWKFDPSSKPPVKSTYPKPTS-NWEGIPDNID 127
GF NIDAA+ GK YFF + W++D K + + YPK + + GI + +D
Sbjct: 369 GFPSTVKNIDAAVFEEDTGKTYFFVAHECWRYD-EYKQSMDTGYPKMIAEEFPGIGNKVD 427
Query: 128 AALHYTNGYTYFFKGSQYWRFNDKSFSV----------NCR 158
A +G+ YFF G++ ++F+ K+ + NCR
Sbjct: 428 AVFQ-KDGFLYFFHGTRQYQFDFKTKRILTLQKANSWFNCR 467
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 63/108 (58%), Gaps = 8/108 (7%)
Query: 3 YWKLTDDGIAEGYPKLISKSWIGLPG---QIDAAFTYSKNGKTYFFKGSKYWRYTG--KS 57
YW + + GYPK I +S+ G P IDAA GKTYFF + WRY +S
Sbjct: 348 YWAVRGQDVLYGYPKDIHRSF-GFPSTVKNIDAAVFEEDTGKTYFFVAHECWRYDEYKQS 406
Query: 58 MDDGYPKDISEGFTGIPDNIDAALVWSGNGKIYFFKGSKFWKFDPSSK 105
MD GYPK I+E F GI + +DA V+ +G +YFF G++ ++FD +K
Sbjct: 407 MDTGYPKMIAEEFPGIGNKVDA--VFQKDGFLYFFHGTRQYQFDFKTK 452
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 60/136 (44%), Gaps = 20/136 (14%)
Query: 27 PGQIDAAFTY----SKNGKTYFFKGSKYWRYTGKSMDDGYPKD----ISEGFTGIPDNID 78
P D+ T+ + G+ FFK Y R + YP+ IS + +P+ +
Sbjct: 275 PQVCDSKLTFDAITTLRGELMFFKDRFYMR-----TNSFYPEVELNFISVFWPQVPNGLQ 329
Query: 79 AALVWSGNGKIYFFKGSKFWKFDPSSKPPVKSTYPKPTSNWEGIPD---NIDAAL-HYTN 134
AA + ++ FFKG+K+W V YPK G P NIDAA+
Sbjct: 330 AAYEIADRDEVRFFKGNKYWAVRGQD---VLYGYPKDIHRSFGFPSTVKNIDAAVFEEDT 386
Query: 135 GYTYFFKGSQYWRFND 150
G TYFF + WR+++
Sbjct: 387 GKTYFFVAHECWRYDE 402
>sp|P28053|MMP1_BOVIN Interstitial collagenase OS=Bos taurus GN=MMP1 PE=1 SV=1
Length = 469
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 84/161 (52%), Gaps = 19/161 (11%)
Query: 15 YPKL----ISKSWIGLPGQIDAAFTYSKNGKTYFFKGSKYWRYTGKSMDDGYPKDI--SE 68
YP++ IS W LP + AA+ + + FFKG+KYW G+ + GYP+DI S
Sbjct: 309 YPEVELNFISVFWPQLPNGLQAAYEVADRDEVRFFKGNKYWAVKGQDVLRGYPRDIYRSF 368
Query: 69 GFTGIPDNIDAALVWSGNGKIYFFKGSKFWKFDPSSKPPVKSTYPKPTS-NWEGIPDNID 127
GF +IDAA+ GK YFF +K W++D K + + YPK + ++ GI + +D
Sbjct: 369 GFPRTVKSIDAAVSEEDTGKTYFFVANKCWRYD-EYKQSMDAGYPKMIAEDFPGIGNKVD 427
Query: 128 AALHYTNGYTYFFKGSQYWRFNDKSFSV----------NCR 158
A G+ YFF G + ++F+ ++ + NCR
Sbjct: 428 AVFQ-KGGFFYFFHGRRQYKFDPQTKRILTLLKANSWFNCR 467
Score = 79.7 bits (195), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 63/108 (58%), Gaps = 8/108 (7%)
Query: 3 YWKLTDDGIAEGYPKLISKSWIGLP---GQIDAAFTYSKNGKTYFFKGSKYWRYTG--KS 57
YW + + GYP+ I +S+ G P IDAA + GKTYFF +K WRY +S
Sbjct: 348 YWAVKGQDVLRGYPRDIYRSF-GFPRTVKSIDAAVSEEDTGKTYFFVANKCWRYDEYKQS 406
Query: 58 MDDGYPKDISEGFTGIPDNIDAALVWSGNGKIYFFKGSKFWKFDPSSK 105
MD GYPK I+E F GI + +DA V+ G YFF G + +KFDP +K
Sbjct: 407 MDAGYPKMIAEDFPGIGNKVDA--VFQKGGFFYFFHGRRQYKFDPQTK 452
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 63/139 (45%), Gaps = 12/139 (8%)
Query: 27 PGQIDAAFTY----SKNGKTYFFKGSKYWRYTGKSMDDGYPKDISEGFTGIPDNIDAALV 82
P D+ T+ + G+ FFK Y R T + IS + +P+ + AA
Sbjct: 275 PEVCDSKLTFDAITTIRGEVMFFKDRFYMR-TNPLYPEVELNFISVFWPQLPNGLQAAYE 333
Query: 83 WSGNGKIYFFKGSKFWKFDPSSKPPVKSTYPKPTSNWEGIP---DNIDAALHYTN-GYTY 138
+ ++ FFKG+K+W V YP+ G P +IDAA+ + G TY
Sbjct: 334 VADRDEVRFFKGNKYWAVKGQD---VLRGYPRDIYRSFGFPRTVKSIDAAVSEEDTGKTY 390
Query: 139 FFKGSQYWRFNDKSFSVNC 157
FF ++ WR+++ S++
Sbjct: 391 FFVANKCWRYDEYKQSMDA 409
>sp|Q6Y4Q5|MMP3_CANFA Stromelysin-1 OS=Canis familiaris GN=MMP3 PE=2 SV=1
Length = 478
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 78/150 (52%), Gaps = 5/150 (3%)
Query: 2 HYWKLTDDGIAEGYPKLISKSWIGLPGQIDAAFTYSKNGKTYFFKGSKYWRYTGKSMDDG 61
H+W+ + + G+ LIS W LP +DAA+ + + FKG+++W G + G
Sbjct: 314 HFWRKSLRTLEPGF-YLISSFWPSLPSGLDAAYEETSKDIVFIFKGNQFWAMRGTEVQAG 372
Query: 62 YPKDI-SEGFTGIPDNIDAALVWSGNGKIYFFKGSKFWKFDPSSKPPVKSTYPKPTS-NW 119
YPK I + GF IDAA+ K YFF G K+W+FD + ++ +PK + ++
Sbjct: 373 YPKGIHTLGFPPTVKKIDAAVFDKEKKKTYFFVGDKYWRFD-EKRQSMEPGFPKQIAEDF 431
Query: 120 EGIPDNIDAALHYTNGYTYFFKGSQYWRFN 149
G+ +DAA G+ YFF GS F+
Sbjct: 432 PGVDSKVDAAFE-AFGFYYFFNGSSQLEFD 460
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 69/140 (49%), Gaps = 13/140 (9%)
Query: 25 GLPGQIDAAFTY----SKNGKTYFFKGSKYWRYTGKSMDDGYPKDISEGFTGIPDNIDAA 80
G P D ++ + G+ FFK +WR + ++++ G+ IS + +P +DAA
Sbjct: 286 GTPAACDPTLSFDAISTLRGEFLFFKDRHFWRKSLRTLEPGF-YLISSFWPSLPSGLDAA 344
Query: 81 LVWSGNGKIYFFKGSKFWKFDPSSKPPVKSTYPKPTSNWEGIP---DNIDAAL-HYTNGY 136
+ ++ FKG++FW + V++ YPK G P IDAA+
Sbjct: 345 YEETSKDIVFIFKGNQFWAMRGTE---VQAGYPKGIHTL-GFPPTVKKIDAAVFDKEKKK 400
Query: 137 TYFFKGSQYWRFNDKSFSVN 156
TYFF G +YWRF++K S+
Sbjct: 401 TYFFVGDKYWRFDEKRQSME 420
>sp|Q9EPL6|MMP1B_MOUSE Interstitial collagenase B OS=Mus musculus GN=Mmp1b PE=2 SV=1
Length = 463
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 81/150 (54%), Gaps = 7/150 (4%)
Query: 11 IAEGYPKLISKSWIGLPGQIDAAFTYSKNGKTYFFKGSKYWRYTGKSMDDGYPKDISEGF 70
+ E +I +W LPG+ DAA+ S + FFKGSK W +++ +G+P DI + F
Sbjct: 306 LPEPLIDVIDLTWPNLPGKFDAAYEVSGVDELRFFKGSKVWAVQEQNVLEGFPMDI-QSF 364
Query: 71 TGIPD---NIDAALVWSGNGKIYFFKGSKFWKFDPSSKPPVKSTYPKPTS-NWEGIPDNI 126
G P NIDAA+ GK YFF +W++D +++ + YP+ + ++ GI +
Sbjct: 365 FGFPSNVTNIDAAVCEEETGKTYFFVDHMYWRYDENTR-SMDPGYPRLIAEDFPGIDYKV 423
Query: 127 DAALHYTNGYTYFFKGSQYWRFNDKSFSVN 156
D + + + YFF S +RFN K+ ++
Sbjct: 424 DDVIQKEDNF-YFFHQSIQYRFNLKTRRID 452
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 60/130 (46%), Gaps = 10/130 (7%)
Query: 31 DAAFTYSKNGKTYFFKGSKYWRYTGKSMDDGYPKDISEGFTGIPDNIDAALVWSGNGKIY 90
DA TY G+ FFK Y R + + I + +P DAA SG ++
Sbjct: 282 DAIITYR--GEVIFFKDRFYIRVIS-FLPEPLIDVIDLTWPNLPGKFDAAYEVSGVDELR 338
Query: 91 FFKGSKFWKFDPSSKPPVKSTYPKPTSNWEGIPDN---IDAAL-HYTNGYTYFFKGSQYW 146
FFKGSK W + V +P ++ G P N IDAA+ G TYFF YW
Sbjct: 339 FFKGSKVWAVQEQN---VLEGFPMDIQSFFGFPSNVTNIDAAVCEEETGKTYFFVDHMYW 395
Query: 147 RFNDKSFSVN 156
R+++ + S++
Sbjct: 396 RYDENTRSMD 405
>sp|Q10835|MMP13_XENLA Collagenase 3 (Fragment) OS=Xenopus laevis GN=mmp13 PE=2 SV=1
Length = 469
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 72/134 (53%), Gaps = 4/134 (2%)
Query: 18 LISKSWIGLPGQIDAAFTYSKNGKTYFFKGSKYWRYTGKSMDDGYPKDISE-GFTGIPDN 76
LI W LP ++DAA+ + +Y F+G K+W G + + YPK + E GF
Sbjct: 320 LIKSFWPELPNKLDAAYEHPAKDLSYLFRGKKFWALNGYDIVEDYPKKLHELGFPKTLKA 379
Query: 77 IDAALVWSGNGKIYFFKGSKFWKFDPSSKPPVKSTYPKPTS-NWEGIPDNIDAALHYTNG 135
IDAA+ GK +FF +W FD ++ + +P+ S ++ GI + +DAA + NG
Sbjct: 380 IDAAVYNKDTGKTFFFTEDSYWSFDEEAR-TLDKGFPRLISEDFPGIGEKVDAA-YQRNG 437
Query: 136 YTYFFKGSQYWRFN 149
Y YFF G+ + ++
Sbjct: 438 YLYFFNGALQFEYS 451
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 54/122 (44%), Gaps = 9/122 (7%)
Query: 39 NGKTYFFKGSKYWRYTGKSMDDGYPKDISEGFTGIPDNIDAALVWSGNGKIYFFKGSKFW 98
G+ FK +WR M D I + +P+ +DAA Y F+G KFW
Sbjct: 295 RGEKMIFKDRFFWR-VHPQMTDAELVLIKSFWPELPNKLDAAYEHPAKDLSYLFRGKKFW 353
Query: 99 KFDPSSKPPVKSTYPKPTSNWEGIPDN---IDAALHYTN-GYTYFFKGSQYWRFNDKSFS 154
+ + YPK G P IDAA++ + G T+FF YW F++++ +
Sbjct: 354 ALNGYD---IVEDYPKKLHEL-GFPKTLKAIDAAVYNKDTGKTFFFTEDSYWSFDEEART 409
Query: 155 VN 156
++
Sbjct: 410 LD 411
Score = 39.3 bits (90), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 34/54 (62%), Gaps = 4/54 (7%)
Query: 3 YWKLTDDG--IAEGYPKLISKSWIGLPGQIDAAFTYSKNGKTYFFKGSKYWRYT 54
YW ++ + +G+P+LIS+ + G+ ++DAA Y +NG YFF G+ + Y+
Sbjct: 400 YWSFDEEARTLDKGFPRLISEDFPGIGEKVDAA--YQRNGYLYFFNGALQFEYS 451
>sp|O18927|MMP13_HORSE Collagenase 3 OS=Equus caballus GN=MMP13 PE=2 SV=1
Length = 472
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 78/143 (54%), Gaps = 7/143 (4%)
Query: 3 YWKLTDDGI-AEGYPKLISKSWIGLPGQIDAAFTYSKNGKTYFFKGSKYWRYTGKSMDDG 61
+W+L + AE + L W LP +IDAA+ + + F+G K+W G + +G
Sbjct: 309 FWRLHPQLVDAELF--LTKSFWPELPNRIDAAYEHPSKDLIFIFRGRKFWALNGYDILEG 366
Query: 62 YPKDISE-GFTGIPDNIDAALVWSGNGKIYFFKGSKFWKFDPSSKPPVKSTYPKPT-SNW 119
YP+ ISE GF I AA+ + GK FF G++ W++D +++ + YP+ ++
Sbjct: 367 YPQKISELGFPKDVKKISAAVHFEDTGKTLFFSGNQVWRYDDTNR-MMDKDYPRLIEEDF 425
Query: 120 EGIPDNIDAALHYTNGYTYFFKG 142
GI D +D A++ NGY YFF G
Sbjct: 426 PGIGDKVD-AVYEKNGYIYFFNG 447
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 59/119 (49%), Gaps = 11/119 (9%)
Query: 37 SKNGKTYFFKGSKYWRYTGKSMDDGYPKDISEGF-TGIPDNIDAALVWSGNGKIYFFKGS 95
S G+T FK +WR + +D +++ F +P+ IDAA I+ F+G
Sbjct: 296 SLRGETMVFKDRFFWRLHPQLVDAEL--FLTKSFWPELPNRIDAAYEHPSKDLIFIFRGR 353
Query: 96 KFWKFDPSSKPPVKSTYPKPTSNWEGIPDN---IDAALHYTN-GYTYFFKGSQYWRFND 150
KFW + + YP+ S G P + I AA+H+ + G T FF G+Q WR++D
Sbjct: 354 KFWALNGYD---ILEGYPQKISEL-GFPKDVKKISAAVHFEDTGKTLFFSGNQVWRYDD 408
Score = 33.9 bits (76), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 7 TDDGIAEGYPKLISKSWIGLPGQIDAAFTYSKNGKTYFFKGSKYWRYT 54
T+ + + YP+LI + + G+ ++DA Y KNG YFF G + Y+
Sbjct: 409 TNRMMDKDYPRLIEEDFPGIGDKVDAV--YEKNGYIYFFNGPIQFEYS 454
>sp|Q9EPL5|MMP1A_MOUSE Interstitial collagenase A OS=Mus musculus GN=Mmp1a PE=2 SV=1
Length = 464
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 72/136 (52%), Gaps = 7/136 (5%)
Query: 18 LISKSWIGLPGQIDAAFTYSKNGKTYFFKGSKYWRYTGKSMDDGYPKDISEGFTGIPDN- 76
LI W LP ++DAA+ S + +FKGSK W +S+ G+P+DI F G P N
Sbjct: 314 LIGILWPNLPVKLDAAYEASMIDQVRYFKGSKVWAVQEQSVLRGFPRDI-HSFFGFPSNV 372
Query: 77 --IDAALVWSGNGKIYFFKGSKFWKFDPSSKPPVKSTYPKPTS-NWEGIPDNIDAALHYT 133
IDAA+ GK YFF +W++D +++ + YP+ T+ ++ GI D +D
Sbjct: 373 THIDAAVCEEETGKTYFFVDHMYWRYDENTQ-SMDPGYPRLTAEDFPGIDDKVDDVFQKG 431
Query: 134 NGYTYFFKGSQYWRFN 149
+ YFF S RFN
Sbjct: 432 ENF-YFFHQSVQHRFN 446
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 64/130 (49%), Gaps = 10/130 (7%)
Query: 31 DAAFTYSKNGKTYFFKGSKYWRYTGKSMDDGYPKDISEGFTGIPDNIDAALVWSGNGKIY 90
DA T+ G+ +FFKG Y R + M + I + +P +DAA S ++
Sbjct: 283 DAITTFR--GEVFFFKGRFYIR-VNRFMPEPELNLIGILWPNLPVKLDAAYEASMIDQVR 339
Query: 91 FFKGSKFWKFDPSSKPPVKSTYPKPTSNWEGIPDN---IDAAL-HYTNGYTYFFKGSQYW 146
+FKGSK W S V +P+ ++ G P N IDAA+ G TYFF YW
Sbjct: 340 YFKGSKVWAVQEQS---VLRGFPRDIHSFFGFPSNVTHIDAAVCEEETGKTYFFVDHMYW 396
Query: 147 RFNDKSFSVN 156
R+++ + S++
Sbjct: 397 RYDENTQSMD 406
>sp|Q8K3F2|MMP21_MOUSE Matrix metalloproteinase-21 OS=Mus musculus GN=Mmp21 PE=2 SV=1
Length = 568
Score = 76.3 bits (186), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/165 (36%), Positives = 80/165 (48%), Gaps = 21/165 (12%)
Query: 14 GYPKLISKSWIGLPGQIDAAFTYS---KNGKTYFFKGSKYWRY--------TGKSMDDGY 62
G P I W G+P Q A+ + + YFFKGS+YWRY T Y
Sbjct: 376 GDPLQILTGWRGIPTQSIDAYVHVWSWGKDERYFFKGSQYWRYDSENDQAHTEDEQGRSY 435
Query: 63 PKDISEGFTGIPDNIDAALVWSGNGKIYFFKGSKFWKFDPSSKPPVKSTYPKPTSNW--E 120
PK ISEGF GIP +D A IYFFK S + FD ++ V ++YPK S
Sbjct: 436 PKLISEGFPGIPSPLDTAFYDRRQQLIYFFKESLVFAFD-VNRNQVLNSYPKKMSQVFPA 494
Query: 121 GIPD-----NIDAALH-YTNGYTYFFKGSQYWR-FNDKSFSVNCR 158
+P N+D+A + Y + +FFKG+ YW+ +DK N R
Sbjct: 495 IMPQNHPFRNLDSAYYSYAHNSIFFFKGNSYWKVVSDKDKQQNTR 539
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 14/122 (11%)
Query: 7 TDDGIAEGYPKLISKSWIGLPGQIDAAFTYSKNGKTYFFKGSKYWRY--TGKSMDDGYPK 64
T+D YPKLIS+ + G+P +D AF + YFFK S + + + + YPK
Sbjct: 427 TEDEQGRSYPKLISEGFPGIPSPLDTAFYDRRQQLIYFFKESLVFAFDVNRNQVLNSYPK 486
Query: 65 DISEGFTGIP------DNIDAALVWSGNGKIYFFKGSKFWKF------DPSSKPPVKSTY 112
+S+ F I N+D+A + I+FFKG+ +WK +++ P+ +
Sbjct: 487 KMSQVFPAIMPQNHPFRNLDSAYYSYAHNSIFFFKGNSYWKVVSDKDKQQNTRLPLNGLF 546
Query: 113 PK 114
PK
Sbjct: 547 PK 548
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 64/120 (53%), Gaps = 12/120 (10%)
Query: 42 TYFFKGSKYWRYTGKSMDDGY--PKDISEGFTGIP-DNIDAAL-VWS-GNGKIYFFKGSK 96
TYFF+ S YW Y ++ Y P I G+ GIP +IDA + VWS G + YFFKGS+
Sbjct: 355 TYFFRNSWYWLYENRNNRTRYGDPLQILTGWRGIPTQSIDAYVHVWSWGKDERYFFKGSQ 414
Query: 97 FWKFDPS-----SKPPVKSTYPKPTSN-WEGIPDNIDAALH-YTNGYTYFFKGSQYWRFN 149
+W++D ++ +YPK S + GIP +D A + YFFK S + F+
Sbjct: 415 YWRYDSENDQAHTEDEQGRSYPKLISEGFPGIPSPLDTAFYDRRQQLIYFFKESLVFAFD 474
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.139 0.467
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,199,877
Number of Sequences: 539616
Number of extensions: 3564537
Number of successful extensions: 7418
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 96
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 6360
Number of HSP's gapped (non-prelim): 366
length of query: 161
length of database: 191,569,459
effective HSP length: 108
effective length of query: 53
effective length of database: 133,290,931
effective search space: 7064419343
effective search space used: 7064419343
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 56 (26.2 bits)