Your job contains 1 sequence.
>psy516
MPAEAATGKLPKPQLRNLLQSSIKVALVQGAVIAFGTAVAWKVLIMDPHKKAISEFYKTY
DGEKDFERMKKAGLFEEYTL
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy516
(80 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
MGI|MGI:104614 - symbol:Cox6c "cytochrome c oxidase subun... 181 4.9e-14 1
RGD|620616 - symbol:Cox6c "cytochrome c oxidase, subunit ... 178 1.0e-13 1
UNIPROTKB|F1S0P0 - symbol:COX6C "Cytochrome c oxidase sub... 172 4.4e-13 1
UNIPROTKB|F1PKU9 - symbol:LOC606860 "Uncharacterized prot... 163 3.9e-12 1
UNIPROTKB|E1BW78 - symbol:COX6C "Uncharacterized protein"... 160 8.2e-12 1
UNIPROTKB|E2R3G9 - symbol:LOC100688725 "Uncharacterized p... 160 8.2e-12 1
RGD|2318198 - symbol:LOC100365890 "cytochrome c oxidase, ... 157 1.7e-11 1
UNIPROTKB|P09669 - symbol:COX6C "Cytochrome c oxidase sub... 153 4.5e-11 1
UNIPROTKB|E2R0C4 - symbol:E2R0C4 "Uncharacterized protein... 151 7.4e-11 1
UNIPROTKB|P04038 - symbol:COX6C "Cytochrome c oxidase sub... 150 9.4e-11 1
UNIPROTKB|A1XQT2 - symbol:COX6C "Cytochrome c oxidase sub... 146 2.5e-10 1
RGD|735056 - symbol:Cox6c-ps1 "cytochrome c oxidase subun... 137 2.2e-09 1
ZFIN|ZDB-GENE-040724-95 - symbol:cox6c "cytochrome c oxid... 134 4.7e-09 1
>MGI|MGI:104614 [details] [associations]
symbol:Cox6c "cytochrome c oxidase subunit VIc" species:10090
"Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0004129 "cytochrome-c oxidase activity" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0005743
"mitochondrial inner membrane" evidence=IDA] [GO:0008150
"biological_process" evidence=ND] [GO:0015992 "proton transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0034220 "ion transmembrane
transport" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] InterPro:IPR004204 Pfam:PF02937 ProDom:PD015032
MGI:MGI:104614 GO:GO:0016021 GO:GO:0005743 GO:GO:0004129
eggNOG:NOG86594 GeneTree:ENSGT00390000004573 HOGENOM:HOG000039249
HOVERGEN:HBG051091 KO:K02268 OMA:ADNERMT OrthoDB:EOG42JNT3
Gene3D:4.10.93.10 PANTHER:PTHR12916 SUPFAM:SSF81415 CTD:1345
EMBL:AK012602 EMBL:AK013459 EMBL:BC024666 EMBL:BC094413
IPI:IPI00131771 PIR:S16083 RefSeq:NP_444301.1 UniGene:Mm.548
ProteinModelPortal:Q9CPQ1 SMR:Q9CPQ1 IntAct:Q9CPQ1 STRING:Q9CPQ1
PhosphoSite:Q9CPQ1 PaxDb:Q9CPQ1 PRIDE:Q9CPQ1
Ensembl:ENSMUST00000014457 Ensembl:ENSMUST00000153512 GeneID:12864
KEGG:mmu:12864 InParanoid:Q9CPQ1 NextBio:282432 Bgee:Q9CPQ1
CleanEx:MM_COX6C Genevestigator:Q9CPQ1
GermOnline:ENSMUSG00000014313 Uniprot:Q9CPQ1
Length = 76
Score = 181 (68.8 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 32/67 (47%), Positives = 46/67 (68%)
Query: 10 LPKPQLRNLLQSSIKVALVQGAVIAFGTAVAWKVLIMDPHKKAISEFYKTYDGEKDFERM 69
LPKPQ+R LL ++V + ++A G A A+K + +P KKA +EFY+ YD KDFE M
Sbjct: 7 LPKPQMRGLLAKRLRVHIAGAFIVALGVAAAYKFGVAEPRKKAYAEFYRNYDSMKDFEEM 66
Query: 70 KKAGLFE 76
+KAG+F+
Sbjct: 67 RKAGIFQ 73
>RGD|620616 [details] [associations]
symbol:Cox6c "cytochrome c oxidase, subunit VIc" species:10116
"Rattus norvegicus" [GO:0004129 "cytochrome-c oxidase activity"
evidence=TAS] [GO:0005739 "mitochondrion" evidence=ISO] [GO:0005743
"mitochondrial inner membrane" evidence=ISO] [GO:0005751
"mitochondrial respiratory chain complex IV" evidence=TAS]
[GO:0008150 "biological_process" evidence=ND] [GO:0016021 "integral
to membrane" evidence=IEA] InterPro:IPR004204 Pfam:PF02937
ProDom:PD015032 RGD:620616 GO:GO:0016021 GO:GO:0004129
GO:GO:0005751 eggNOG:NOG86594 GeneTree:ENSGT00390000004573
HOGENOM:HOG000039249 HOVERGEN:HBG051091 KO:K02268 OrthoDB:EOG42JNT3
Gene3D:4.10.93.10 PANTHER:PTHR12916 SUPFAM:SSF81415 CTD:1345
OMA:VKEFNAM EMBL:M20153 EMBL:M20152 EMBL:M27466 EMBL:M27467
EMBL:BC058480 EMBL:K01565 IPI:IPI00230832 PIR:S00114
RefSeq:NP_062233.2 UniGene:Rn.846 ProteinModelPortal:P11951
SMR:P11951 STRING:P11951 PhosphoSite:P11951 PRIDE:P11951
Ensembl:ENSRNOT00000014407 GeneID:54322 KEGG:rno:54322
UCSC:RGD:620616 InParanoid:P11951 NextBio:611014
ArrayExpress:P11951 Genevestigator:P11951
GermOnline:ENSRNOG00000010807 Uniprot:P11951
Length = 76
Score = 178 (67.7 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 32/67 (47%), Positives = 47/67 (70%)
Query: 10 LPKPQLRNLLQSSIKVALVQGAVIAFGTAVAWKVLIMDPHKKAISEFYKTYDGEKDFERM 69
LPKPQ+R LL ++V +V V+A G A A+K + +P KKA ++FY+ YD KDFE M
Sbjct: 7 LPKPQMRGLLAKRLRVHIVGAFVVALGVAAAYKFGVAEPRKKAYADFYRNYDSMKDFEEM 66
Query: 70 KKAGLFE 76
++AG+F+
Sbjct: 67 RQAGVFQ 73
>UNIPROTKB|F1S0P0 [details] [associations]
symbol:COX6C "Cytochrome c oxidase subunit 6C" species:9823
"Sus scrofa" [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0004129 "cytochrome-c oxidase activity"
evidence=IEA] InterPro:IPR004204 Pfam:PF02937 ProDom:PD015032
GO:GO:0005743 GO:GO:0004129 GeneTree:ENSGT00390000004573
Gene3D:4.10.93.10 PANTHER:PTHR12916 SUPFAM:SSF81415 OMA:VKEFNAM
EMBL:CU138567 Ensembl:ENSSSCT00000006661 Uniprot:F1S0P0
Length = 75
Score = 172 (65.6 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 30/71 (42%), Positives = 46/71 (64%)
Query: 6 ATGKLPKPQLRNLLQSSIKVALVQGAVIAFGTAVAWKVLIMDPHKKAISEFYKTYDGEKD 65
AT L KPQ+R LL ++ +V +++ G A +K + +P KKA ++FY+ YD KD
Sbjct: 2 ATSSLTKPQMRGLLAKRLRFHIVGAFIVSLGVATFYKFAVAEPRKKAYADFYRNYDSMKD 61
Query: 66 FERMKKAGLFE 76
FE M+KAG+F+
Sbjct: 62 FEEMRKAGIFQ 72
>UNIPROTKB|F1PKU9 [details] [associations]
symbol:LOC606860 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0004129 "cytochrome-c oxidase
activity" evidence=IEA] InterPro:IPR004204 Pfam:PF02937
ProDom:PD015032 GO:GO:0004129 GeneTree:ENSGT00390000004573
KO:K02268 Gene3D:4.10.93.10 PANTHER:PTHR12916 SUPFAM:SSF81415
OMA:VKEFNAM EMBL:AAEX03009973 RefSeq:XP_856090.1
Ensembl:ENSCAFT00000010820 GeneID:606860 KEGG:cfa:606860
Uniprot:F1PKU9
Length = 75
Score = 163 (62.4 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 29/67 (43%), Positives = 43/67 (64%)
Query: 10 LPKPQLRNLLQSSIKVALVQGAVIAFGTAVAWKVLIMDPHKKAISEFYKTYDGEKDFERM 69
L KPQ+R LL ++ +V ++ G A +K + +P KKA ++FY+ YD KDFE M
Sbjct: 6 LTKPQMRGLLAKRLRFHIVGAFAVSLGVAAFYKFAVAEPRKKAYADFYRNYDSMKDFEEM 65
Query: 70 KKAGLFE 76
KKAG+F+
Sbjct: 66 KKAGIFQ 72
>UNIPROTKB|E1BW78 [details] [associations]
symbol:COX6C "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004129 "cytochrome-c oxidase activity" evidence=IEA]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA]
InterPro:IPR004204 Pfam:PF02937 ProDom:PD015032 GO:GO:0005743
GO:GO:0004129 GeneTree:ENSGT00390000004573 Gene3D:4.10.93.10
PANTHER:PTHR12916 SUPFAM:SSF81415 OMA:VKEFNAM EMBL:AADN02025087
EMBL:AADN02025088 IPI:IPI00584699 Ensembl:ENSGALT00000030826
Uniprot:E1BW78
Length = 73
Score = 160 (61.4 bits), Expect = 8.2e-12, P = 8.2e-12
Identities = 31/67 (46%), Positives = 43/67 (64%)
Query: 10 LPKPQLRNLLQSSIKVALVQGAVIAFGTAVAWKVLIMDPHKKAISEFYKTYDGEKDFERM 69
LPKPQ+R LL +K L +++ G A +K + +P K+A +EFYK YD KDFE M
Sbjct: 6 LPKPQMRRLLARRMKFHLFGAFLVSLGCAALYKFGVAEPRKRAYAEFYKNYDPMKDFEAM 65
Query: 70 KKAGLFE 76
+ AG+FE
Sbjct: 66 RAAGVFE 72
>UNIPROTKB|E2R3G9 [details] [associations]
symbol:LOC100688725 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0004129 "cytochrome-c oxidase
activity" evidence=IEA] InterPro:IPR004204 Pfam:PF02937
ProDom:PD015032 GO:GO:0004129 GeneTree:ENSGT00390000004573
OMA:ADNERMT Gene3D:4.10.93.10 PANTHER:PTHR12916 SUPFAM:SSF81415
EMBL:AAEX03002631 Ensembl:ENSCAFT00000026390 Uniprot:E2R3G9
Length = 74
Score = 160 (61.4 bits), Expect = 8.2e-12, P = 8.2e-12
Identities = 28/67 (41%), Positives = 43/67 (64%)
Query: 10 LPKPQLRNLLQSSIKVALVQGAVIAFGTAVAWKVLIMDPHKKAISEFYKTYDGEKDFERM 69
L KPQ+R LL ++ +V ++ G A +K + +P KKA ++FY+ YD +DFE M
Sbjct: 6 LTKPQMRGLLAKRLRFHIVGAFAVSLGVAAFYKFAVAEPRKKAYADFYRNYDSMRDFEEM 65
Query: 70 KKAGLFE 76
KKAG+F+
Sbjct: 66 KKAGIFQ 72
>RGD|2318198 [details] [associations]
symbol:LOC100365890 "cytochrome c oxidase, subunit VIc-like"
species:10116 "Rattus norvegicus" [GO:0004129 "cytochrome-c oxidase
activity" evidence=IEA] InterPro:IPR004204 Pfam:PF02937
ProDom:PD015032 RGD:2318198 GO:GO:0004129 Gene3D:4.10.93.10
PANTHER:PTHR12916 SUPFAM:SSF81415 OMA:GLATAYK IPI:IPI00569997
PRIDE:F1M733 Ensembl:ENSRNOT00000048823 Uniprot:F1M733
Length = 76
Score = 157 (60.3 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 30/65 (46%), Positives = 43/65 (66%)
Query: 12 KPQLRNLLQSSIKVALVQGAVIAFGTAVAWKVLIMDPHKKAISEFYKTYDGEKDFERMKK 71
KPQ+R LL + V +V V+A G A A+K + +P KKA ++FY+ D KDFE M+K
Sbjct: 9 KPQMRGLLAKRLWVHIVGAVVVALGLATAYKFGMAEPQKKAYADFYRNSDSMKDFEEMRK 68
Query: 72 AGLFE 76
AG+F+
Sbjct: 69 AGIFQ 73
>UNIPROTKB|P09669 [details] [associations]
symbol:COX6C "Cytochrome c oxidase subunit 6C" species:9606
"Homo sapiens" [GO:0004129 "cytochrome-c oxidase activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0006091 "generation of precursor metabolites and energy"
evidence=TAS] [GO:0005743 "mitochondrial inner membrane"
evidence=TAS] [GO:0022904 "respiratory electron transport chain"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] Reactome:REACT_111217 InterPro:IPR004204 Pfam:PF02937
ProDom:PD015032 GO:GO:0016021 EMBL:CH471060 GO:GO:0005743
GO:GO:0044281 GO:GO:0004129 GO:GO:0022904 eggNOG:NOG86594
HOGENOM:HOG000039249 HOVERGEN:HBG051091 KO:K02268 OrthoDB:EOG42JNT3
Gene3D:4.10.93.10 PANTHER:PTHR12916 SUPFAM:SSF81415 EMBL:X13238
EMBL:AF067637 EMBL:AF067636 EMBL:BT007007 EMBL:AK311791
EMBL:BC000187 IPI:IPI00015972 PIR:S01960 RefSeq:NP_004365.1
UniGene:Hs.351875 ProteinModelPortal:P09669 SMR:P09669
IntAct:P09669 STRING:P09669 PhosphoSite:P09669 DMDM:1352175
PaxDb:P09669 PeptideAtlas:P09669 PRIDE:P09669 DNASU:1345
Ensembl:ENST00000297564 Ensembl:ENST00000517682
Ensembl:ENST00000518171 Ensembl:ENST00000520271
Ensembl:ENST00000520468 Ensembl:ENST00000520517
Ensembl:ENST00000522934 Ensembl:ENST00000522940
Ensembl:ENST00000523016 Ensembl:ENST00000524245 GeneID:1345
KEGG:hsa:1345 UCSC:uc003yiy.2 CTD:1345 GeneCards:GC08M100885
HGNC:HGNC:2285 HPA:CAB016244 MIM:124090 neXtProt:NX_P09669
PharmGKB:PA26802 InParanoid:P09669 OMA:VKEFNAM PhylomeDB:P09669
GenomeRNAi:1345 NextBio:5453 Bgee:P09669 CleanEx:HS_COX6C
Genevestigator:P09669 GermOnline:ENSG00000164919 Uniprot:P09669
Length = 75
Score = 153 (58.9 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 28/67 (41%), Positives = 43/67 (64%)
Query: 10 LPKPQLRNLLQSSIKVALVQGAVIAFGTAVAWKVLIMDPHKKAISEFYKTYDGEKDFERM 69
LPKP++R LL ++ + V++ G A +K + D KKA ++FY+ YD KDFE M
Sbjct: 6 LPKPRMRGLLARRLRNHMAVAFVLSLGVAALYKFRVADQRKKAYADFYRNYDVMKDFEEM 65
Query: 70 KKAGLFE 76
+KAG+F+
Sbjct: 66 RKAGIFQ 72
>UNIPROTKB|E2R0C4 [details] [associations]
symbol:E2R0C4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004129 "cytochrome-c oxidase activity"
evidence=IEA] InterPro:IPR004204 Pfam:PF02937 ProDom:PD015032
GO:GO:0004129 GeneTree:ENSGT00390000004573 Gene3D:4.10.93.10
PANTHER:PTHR12916 SUPFAM:SSF81415 EMBL:AAEX03015848
ProteinModelPortal:E2R0C4 Ensembl:ENSCAFT00000012255 OMA:GLATAYK
Uniprot:E2R0C4
Length = 75
Score = 151 (58.2 bits), Expect = 7.4e-11, P = 7.4e-11
Identities = 28/67 (41%), Positives = 41/67 (61%)
Query: 10 LPKPQLRNLLQSSIKVALVQGAVIAFGTAVAWKVLIMDPHKKAISEFYKTYDGEKDFERM 69
L KPQ+R LL ++ +V ++ G A +K + KKA ++FY+ YD KDFE M
Sbjct: 6 LMKPQMRGLLAKCLRFHIVGAFAVSLGVAAFYKFAVAKSRKKAYADFYRNYDSMKDFEEM 65
Query: 70 KKAGLFE 76
KKAG+F+
Sbjct: 66 KKAGIFQ 72
>UNIPROTKB|P04038 [details] [associations]
symbol:COX6C "Cytochrome c oxidase subunit 6C" species:9913
"Bos taurus" [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0004129 "cytochrome-c oxidase activity" evidence=IEA]
InterPro:IPR004204 Pfam:PF02937 ProDom:PD015032 GO:GO:0016021
GO:GO:0005743 GO:GO:0004129 PDB:1OCC PDB:1OCO PDB:1OCR PDB:1OCZ
PDB:1V54 PDB:1V55 PDB:2DYR PDB:2DYS PDB:2EIJ PDB:2EIK PDB:2EIL
PDB:2EIM PDB:2EIN PDB:2OCC PDB:2Y69 PDB:2YBB PDB:2ZXW PDB:3ABK
PDB:3ABL PDB:3ABM PDB:3AG1 PDB:3AG2 PDB:3AG3 PDB:3AG4 PDB:3ASN
PDB:3ASO PDBsum:1OCC PDBsum:1OCO PDBsum:1OCR PDBsum:1OCZ
PDBsum:1V54 PDBsum:1V55 PDBsum:2DYR PDBsum:2DYS PDBsum:2EIJ
PDBsum:2EIK PDBsum:2EIL PDBsum:2EIM PDBsum:2EIN PDBsum:2OCC
PDBsum:2Y69 PDBsum:2YBB PDBsum:2ZXW PDBsum:3ABK PDBsum:3ABL
PDBsum:3ABM PDBsum:3AG1 PDBsum:3AG2 PDBsum:3AG3 PDBsum:3AG4
PDBsum:3ASN PDBsum:3ASO EMBL:BC126788 IPI:IPI00707430 PIR:A00496
RefSeq:NP_001231040.1 UniGene:Bt.28261 ProteinModelPortal:P04038
SMR:P04038 IntAct:P04038 STRING:P04038 PRIDE:P04038
Ensembl:ENSBTAT00000018778 GeneID:614700 KEGG:bta:614700
eggNOG:NOG86594 GeneTree:ENSGT00390000004573 HOGENOM:HOG000039249
HOVERGEN:HBG051091 InParanoid:P04038 KO:K02268 OMA:ADNERMT
OrthoDB:EOG42JNT3 EvolutionaryTrace:P04038 NextBio:20899236
Gene3D:4.10.93.10 PANTHER:PTHR12916 SUPFAM:SSF81415 Uniprot:P04038
Length = 74
Score = 150 (57.9 bits), Expect = 9.4e-11, P = 9.4e-11
Identities = 27/67 (40%), Positives = 43/67 (64%)
Query: 10 LPKPQLRNLLQSSIKVALVQGAVIAFGTAVAWKVLIMDPHKKAISEFYKTYDGEKDFERM 69
L KPQ+R LL ++ +V +++ G A +K + + KKA ++FY+ YD KDFE M
Sbjct: 5 LAKPQMRGLLARRLRFHIVGAFMVSLGFATFYKFAVAEKRKKAYADFYRNYDSMKDFEEM 64
Query: 70 KKAGLFE 76
+KAG+F+
Sbjct: 65 RKAGIFQ 71
>UNIPROTKB|A1XQT2 [details] [associations]
symbol:COX6C "Cytochrome c oxidase subunit 6C" species:9823
"Sus scrofa" [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0004129 "cytochrome-c oxidase activity" evidence=IEA]
InterPro:IPR004204 Pfam:PF02937 ProDom:PD015032 GO:GO:0016021
GO:GO:0005743 GO:GO:0004129 eggNOG:NOG86594 HOGENOM:HOG000039249
KO:K02268 OrthoDB:EOG42JNT3 Gene3D:4.10.93.10 PANTHER:PTHR12916
SUPFAM:SSF81415 CTD:1345 EMBL:DQ629154 RefSeq:NP_001090942.1
UniGene:Ssc.8238 ProteinModelPortal:A1XQT2 SMR:A1XQT2 STRING:A1XQT2
PRIDE:A1XQT2 GeneID:100037989 KEGG:ssc:100037989 Uniprot:A1XQT2
Length = 76
Score = 146 (56.5 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 28/72 (38%), Positives = 44/72 (61%)
Query: 6 ATGKLPKPQLR-NLLQSSIKVALVQGAVIAFGTAVAWKVLIMDPHKKAISEFYKTYDGEK 64
AT L KPQ+R ++ +V +++ G A +K + +P KKA ++FY+ YD K
Sbjct: 2 ATSSLTKPQMRWPSGPRRLRFHIVGAFIVSLGVATFYKFAVAEPRKKAYADFYRNYDSMK 61
Query: 65 DFERMKKAGLFE 76
DFE M+KAG+F+
Sbjct: 62 DFEEMRKAGIFQ 73
>RGD|735056 [details] [associations]
symbol:Cox6c-ps1 "cytochrome c oxidase subunit VIc, pseudogene"
species:10116 "Rattus norvegicus" [GO:0004129 "cytochrome-c oxidase
activity" evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR004204 Pfam:PF02937 ProDom:PD015032 RGD:735056
GO:GO:0016021 GO:GO:0005743 GO:GO:0004129 HOVERGEN:HBG051091
Gene3D:4.10.93.10 PANTHER:PTHR12916 SUPFAM:SSF81415 EMBL:M20183
IPI:IPI00231122 PIR:B29907 UniGene:Rn.10885
ProteinModelPortal:P11950 SMR:P11950 PRIDE:P11950 UCSC:RGD:735056
InParanoid:P11950 OMA:FYKNDST NextBio:625167 Genevestigator:P11950
GermOnline:ENSRNOG00000032602 Uniprot:P11950
Length = 76
Score = 137 (53.3 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 27/66 (40%), Positives = 40/66 (60%)
Query: 10 LPKPQLRNLLQSSIKVALVQGAVIAFGTAVAWKVLIMDPHKKAISEFYKTYDGEKDFERM 69
LPKPQ+ + L + V +V ++ G A A K P KKA ++FY+ +D KDF+ M
Sbjct: 7 LPKPQMHDPLSKRLWVHIVGAFIVDLGVAAAHKFGAAKPRKKAYADFYRNHDPMKDFDEM 66
Query: 70 KKAGLF 75
+KAG+F
Sbjct: 67 RKAGVF 72
>ZFIN|ZDB-GENE-040724-95 [details] [associations]
symbol:cox6c "cytochrome c oxidase subunit VIc"
species:7955 "Danio rerio" [GO:0004129 "cytochrome-c oxidase
activity" evidence=IEA] InterPro:IPR004204 Pfam:PF02937
ProDom:PD015032 ZFIN:ZDB-GENE-040724-95 GO:GO:0004129
GeneTree:ENSGT00390000004573 HOGENOM:HOG000039249
HOVERGEN:HBG051091 KO:K02268 Gene3D:4.10.93.10 PANTHER:PTHR12916
SUPFAM:SSF81415 CTD:1345 OMA:VKEFNAM EMBL:AL929108 IPI:IPI00492713
RefSeq:NP_001191053.1 UniGene:Dr.78204 SMR:Q6ZM23
Ensembl:ENSDART00000056319 GeneID:494577 KEGG:dre:494577
InParanoid:Q6ZM23 NextBio:20865735 Uniprot:Q6ZM23
Length = 76
Score = 134 (52.2 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 26/67 (38%), Positives = 39/67 (58%)
Query: 10 LPKPQLRNLLQSSIKVALVQGAVIAFGTAVAWKVLIMDPHKKAISEFYKTYDGEKDFERM 69
L KP +R LL ++ L ++ A A+K + DP KKA ++FY YD K+F M
Sbjct: 3 LAKPAMRGLLAKRLRFHLPIAFALSLCAAAAFKFTVSDPRKKAYADFYTQYDSTKEFNAM 62
Query: 70 KKAGLFE 76
++AG+FE
Sbjct: 63 REAGIFE 69
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.133 0.380 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 80 80 0.00091 102 3 11 22 0.41 29
29 0.41 30
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 13
No. of states in DFA: 505 (54 KB)
Total size of DFA: 95 KB (2069 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:02
No. of threads or processors used: 24
Search cpu time: 9.24u 0.10s 9.34t Elapsed: 00:00:09
Total cpu time: 9.24u 0.10s 9.34t Elapsed: 00:00:11
Start: Thu Aug 15 13:37:05 2013 End: Thu Aug 15 13:37:16 2013